Query 041537
Match_columns 547
No_of_seqs 400 out of 3921
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 5.5E-79 1.9E-83 653.5 40.2 433 24-546 38-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 1.6E-55 5.5E-60 464.5 23.4 398 28-545 2-423 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 2.4E-44 8.2E-49 380.2 32.2 374 28-526 4-407 (437)
4 3vrd_B FCCB subunit, flavocyto 100.0 9.2E-43 3.2E-47 364.0 25.4 349 28-517 2-386 (401)
5 3h28_A Sulfide-quinone reducta 100.0 2.8E-42 9.7E-47 363.6 28.3 384 28-538 2-409 (430)
6 4eqs_A Coenzyme A disulfide re 100.0 4.5E-42 1.5E-46 362.2 27.9 275 29-346 1-282 (437)
7 3klj_A NAD(FAD)-dependent dehy 100.0 3.3E-42 1.1E-46 357.1 25.4 261 26-345 7-270 (385)
8 1xhc_A NADH oxidase /nitrite r 100.0 2.4E-41 8E-46 348.8 31.0 263 28-344 8-272 (367)
9 3h8l_A NADH oxidase; membrane 100.0 3.5E-40 1.2E-44 345.5 27.4 280 28-344 1-311 (409)
10 3ef6_A Toluene 1,2-dioxygenase 100.0 5.7E-40 1.9E-44 343.8 27.3 271 28-345 2-280 (410)
11 3lxd_A FAD-dependent pyridine 100.0 4.5E-39 1.5E-43 337.7 32.4 275 26-345 7-290 (415)
12 3fg2_P Putative rubredoxin red 100.0 7.6E-39 2.6E-43 334.7 33.1 272 28-345 1-280 (404)
13 2gqw_A Ferredoxin reductase; f 100.0 2.6E-39 8.7E-44 338.5 25.5 265 27-345 6-278 (408)
14 3ics_A Coenzyme A-disulfide re 100.0 4.4E-38 1.5E-42 344.6 30.8 282 23-345 31-323 (588)
15 3ntd_A FAD-dependent pyridine 100.0 6.2E-38 2.1E-42 342.0 31.9 279 28-345 1-308 (565)
16 1q1r_A Putidaredoxin reductase 100.0 1.4E-37 4.9E-42 327.5 29.5 273 27-345 3-289 (431)
17 3iwa_A FAD-dependent pyridine 100.0 6.6E-38 2.3E-42 334.2 27.1 279 28-345 3-299 (472)
18 2bc0_A NADH oxidase; flavoprot 100.0 7.1E-38 2.4E-42 335.3 25.3 276 26-345 33-331 (490)
19 2cdu_A NADPH oxidase; flavoenz 100.0 2.4E-37 8.1E-42 328.1 27.5 275 29-345 1-287 (452)
20 3kd9_A Coenzyme A disulfide re 100.0 1.9E-37 6.6E-42 328.5 25.1 274 27-345 2-285 (449)
21 3oc4_A Oxidoreductase, pyridin 100.0 1.5E-37 5.3E-42 329.5 22.8 273 29-345 3-284 (452)
22 3cgb_A Pyridine nucleotide-dis 100.0 1.1E-36 3.8E-41 325.2 28.5 278 28-345 36-323 (480)
23 2v3a_A Rubredoxin reductase; a 100.0 3.5E-36 1.2E-40 312.4 29.5 268 28-344 4-281 (384)
24 1nhp_A NADH peroxidase; oxidor 100.0 1.5E-36 5.1E-41 321.5 26.5 276 29-345 1-286 (447)
25 1m6i_A Programmed cell death p 100.0 3.2E-36 1.1E-40 322.4 24.0 278 26-345 9-323 (493)
26 1zmd_A Dihydrolipoyl dehydroge 100.0 5.1E-36 1.7E-40 319.8 23.6 269 27-343 5-323 (474)
27 3l8k_A Dihydrolipoyl dehydroge 100.0 3.1E-36 1.1E-40 320.7 21.8 267 28-343 4-311 (466)
28 2qae_A Lipoamide, dihydrolipoy 100.0 1.2E-35 4.2E-40 316.3 24.9 270 28-343 2-317 (468)
29 3f8d_A Thioredoxin reductase ( 100.0 2.6E-35 8.9E-40 297.4 26.0 266 27-344 14-291 (323)
30 2a8x_A Dihydrolipoyl dehydroge 100.0 6.8E-36 2.3E-40 318.0 22.1 268 28-343 3-312 (464)
31 3urh_A Dihydrolipoyl dehydroge 100.0 2.3E-35 7.9E-40 316.1 25.3 274 24-343 21-341 (491)
32 2zbw_A Thioredoxin reductase; 100.0 2.6E-35 8.8E-40 299.7 24.3 267 27-344 4-291 (335)
33 1ebd_A E3BD, dihydrolipoamide 100.0 9.6E-36 3.3E-40 316.0 22.0 267 28-343 3-311 (455)
34 1mo9_A ORF3; nucleotide bindin 100.0 4.1E-35 1.4E-39 316.2 25.4 267 26-343 41-356 (523)
35 1zk7_A HGII, reductase, mercur 100.0 8.8E-35 3E-39 309.6 27.0 265 27-343 3-312 (467)
36 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-35 5.3E-40 315.8 21.2 271 27-343 5-320 (470)
37 3qfa_A Thioredoxin reductase 1 100.0 6.9E-35 2.4E-39 314.0 24.6 272 24-343 28-357 (519)
38 1ges_A Glutathione reductase; 100.0 4.8E-35 1.6E-39 310.0 22.6 259 28-343 4-306 (450)
39 2hqm_A GR, grase, glutathione 100.0 4.3E-35 1.5E-39 312.9 22.0 266 26-343 9-325 (479)
40 2eq6_A Pyruvate dehydrogenase 100.0 4E-35 1.4E-39 311.9 21.6 263 28-343 6-312 (464)
41 1ojt_A Surface protein; redox- 100.0 7.3E-35 2.5E-39 311.4 23.1 267 28-343 6-327 (482)
42 3itj_A Thioredoxin reductase 1 100.0 2.6E-35 8.8E-40 299.6 18.7 273 24-343 18-310 (338)
43 2q7v_A Thioredoxin reductase; 100.0 1.8E-34 6.2E-39 292.4 24.7 263 27-343 7-287 (325)
44 1fec_A Trypanothione reductase 100.0 1.4E-34 4.9E-39 309.4 25.1 272 27-343 2-329 (490)
45 3fbs_A Oxidoreductase; structu 100.0 6.5E-35 2.2E-39 291.1 20.9 256 28-343 2-268 (297)
46 2wpf_A Trypanothione reductase 100.0 1.7E-34 6E-39 309.1 24.8 270 28-343 7-333 (495)
47 3dk9_A Grase, GR, glutathione 100.0 1.3E-34 4.4E-39 309.3 23.0 265 27-343 19-334 (478)
48 1v59_A Dihydrolipoamide dehydr 100.0 1.5E-34 5E-39 308.9 23.4 270 28-343 5-328 (478)
49 1onf_A GR, grase, glutathione 100.0 4.3E-35 1.5E-39 314.4 19.2 265 28-344 2-316 (500)
50 3lzw_A Ferredoxin--NADP reduct 100.0 7.1E-35 2.4E-39 295.6 19.1 261 27-344 6-289 (332)
51 3dgz_A Thioredoxin reductase 2 100.0 3E-34 1E-38 307.1 24.9 269 27-343 5-329 (488)
52 2r9z_A Glutathione amide reduc 100.0 2.5E-34 8.6E-39 305.5 23.8 261 27-343 3-305 (463)
53 3r9u_A Thioredoxin reductase; 100.0 1.6E-34 5.3E-39 290.8 20.8 262 27-343 3-287 (315)
54 3cty_A Thioredoxin reductase; 100.0 4.9E-34 1.7E-38 288.4 23.9 263 28-343 16-291 (319)
55 1fl2_A Alkyl hydroperoxide red 100.0 6.5E-34 2.2E-38 286.1 23.8 264 29-344 2-281 (310)
56 3ab1_A Ferredoxin--NADP reduct 100.0 3.9E-34 1.3E-38 294.3 22.5 264 27-344 13-302 (360)
57 2q0l_A TRXR, thioredoxin reduc 100.0 3.9E-34 1.3E-38 287.9 21.8 259 28-343 1-284 (311)
58 1trb_A Thioredoxin reductase; 100.0 2.3E-34 7.9E-39 290.7 20.1 266 27-344 4-290 (320)
59 1xdi_A RV3303C-LPDA; reductase 100.0 1.9E-34 6.6E-39 309.4 20.7 268 28-343 2-320 (499)
60 1lvl_A Dihydrolipoamide dehydr 100.0 2.9E-34 9.9E-39 304.7 21.8 260 28-343 5-308 (458)
61 4gcm_A TRXR, thioredoxin reduc 100.0 1.7E-33 5.8E-38 283.7 25.1 264 28-343 6-281 (312)
62 4b1b_A TRXR, thioredoxin reduc 100.0 2E-33 6.7E-38 301.7 26.3 267 28-343 42-361 (542)
63 3dgh_A TRXR-1, thioredoxin red 100.0 2.1E-33 7.3E-38 300.2 25.4 268 26-343 7-329 (483)
64 4dna_A Probable glutathione re 100.0 9.9E-34 3.4E-38 301.1 21.8 261 28-343 5-309 (463)
65 2yqu_A 2-oxoglutarate dehydrog 100.0 3.7E-34 1.3E-38 303.8 18.0 263 29-343 2-305 (455)
66 4a5l_A Thioredoxin reductase; 100.0 2.4E-33 8.3E-38 282.4 22.2 270 27-344 3-288 (314)
67 3lad_A Dihydrolipoamide dehydr 100.0 1.3E-33 4.3E-38 301.5 21.2 270 27-343 2-321 (476)
68 3o0h_A Glutathione reductase; 100.0 1.1E-33 3.7E-38 302.5 20.7 260 28-343 26-329 (484)
69 2a87_A TRXR, TR, thioredoxin r 100.0 2.6E-33 8.9E-38 285.2 20.2 265 26-344 12-292 (335)
70 1vdc_A NTR, NADPH dependent th 100.0 1.6E-33 5.3E-38 286.3 18.2 271 27-344 7-299 (333)
71 3ic9_A Dihydrolipoamide dehydr 100.0 2.3E-33 7.9E-38 300.3 18.3 264 28-343 8-316 (492)
72 2x8g_A Thioredoxin glutathione 100.0 2.3E-32 7.8E-37 299.8 23.7 270 26-343 105-436 (598)
73 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.4E-31 4.9E-36 288.2 24.7 266 26-344 210-492 (521)
74 4a9w_A Monooxygenase; baeyer-v 100.0 4.9E-32 1.7E-36 277.1 19.4 263 27-341 2-323 (357)
75 2vdc_G Glutamate synthase [NAD 100.0 2.3E-32 7.8E-37 288.8 17.0 273 26-343 120-420 (456)
76 4fk1_A Putative thioredoxin re 100.0 2.3E-32 8E-37 274.4 16.3 263 25-344 3-276 (304)
77 3d1c_A Flavin-containing putat 100.0 4.2E-31 1.4E-35 272.2 24.9 266 27-345 3-313 (369)
78 3k30_A Histamine dehydrogenase 100.0 9.1E-31 3.1E-35 291.2 18.0 272 6-343 364-652 (690)
79 1lqt_A FPRA; NADP+ derivative, 100.0 4.2E-31 1.4E-35 279.5 13.9 286 27-344 2-363 (456)
80 3s5w_A L-ornithine 5-monooxyge 100.0 1.1E-29 3.6E-34 270.1 21.3 282 27-343 29-420 (463)
81 1o94_A Tmadh, trimethylamine d 100.0 3.5E-30 1.2E-34 287.6 18.1 260 23-343 384-677 (729)
82 1cjc_A Protein (adrenodoxin re 100.0 5.3E-30 1.8E-34 271.3 14.4 285 27-344 5-371 (460)
83 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.3E-29 4.5E-34 281.1 17.9 274 8-344 353-652 (671)
84 2xve_A Flavin-containing monoo 100.0 8.3E-29 2.9E-33 262.9 22.0 253 29-343 3-318 (464)
85 1gte_A Dihydropyrimidine dehyd 100.0 3.1E-29 1.1E-33 289.3 18.8 275 27-343 186-484 (1025)
86 2gag_A Heterotetrameric sarcos 100.0 4.1E-28 1.4E-32 278.1 18.6 266 27-343 127-421 (965)
87 3gwf_A Cyclohexanone monooxyge 99.9 6.5E-28 2.2E-32 260.0 15.8 267 27-343 7-433 (540)
88 2gv8_A Monooxygenase; FMO, FAD 99.9 1E-26 3.5E-31 246.0 19.6 258 27-343 5-339 (447)
89 1y56_A Hypothetical protein PH 99.9 3.7E-26 1.3E-30 244.4 16.9 238 28-343 108-354 (493)
90 3uox_A Otemo; baeyer-villiger 99.9 1E-26 3.5E-31 250.9 12.6 182 26-242 7-224 (545)
91 4ap3_A Steroid monooxygenase; 99.9 6.2E-26 2.1E-30 245.0 16.2 176 26-242 19-230 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 2.1E-24 7E-29 233.6 19.1 172 27-239 15-221 (542)
93 2ywl_A Thioredoxin reductase r 99.8 2.7E-20 9.3E-25 171.5 18.0 127 192-344 3-147 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1E-17 3.5E-22 179.1 21.7 283 25-341 36-457 (501)
95 2cul_A Glucose-inhibited divis 99.5 9E-14 3.1E-18 133.2 15.9 95 192-303 5-126 (232)
96 2e5v_A L-aspartate oxidase; ar 99.5 8.8E-15 3E-19 155.2 4.6 257 30-343 1-340 (472)
97 3fpz_A Thiazole biosynthetic e 99.4 2.8E-15 9.6E-20 151.4 -7.2 229 28-344 65-295 (326)
98 2gqf_A Hypothetical protein HI 99.2 2.4E-12 8.2E-17 133.5 4.1 36 28-63 4-39 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.4E-09 4.9E-14 113.6 13.9 91 246-343 205-307 (431)
100 2ywl_A Thioredoxin reductase r 99.0 5.1E-10 1.7E-14 102.3 7.7 107 28-143 1-111 (180)
101 2cul_A Glucose-inhibited divis 99.0 3.6E-10 1.2E-14 108.0 6.8 116 27-151 2-134 (232)
102 1rp0_A ARA6, thiazole biosynth 99.0 3.6E-09 1.2E-13 104.3 13.2 139 191-343 40-244 (284)
103 3ces_A MNMG, tRNA uridine 5-ca 98.9 2.9E-09 9.8E-14 115.1 8.6 115 28-151 28-190 (651)
104 4dgk_A Phytoene dehydrogenase; 98.9 6.4E-09 2.2E-13 110.9 11.1 53 245-299 221-275 (501)
105 3alj_A 2-methyl-3-hydroxypyrid 98.8 1E-08 3.6E-13 105.2 8.3 108 26-142 9-160 (379)
106 2zxi_A TRNA uridine 5-carboxym 98.7 1.2E-08 4.1E-13 109.8 8.3 115 28-151 27-189 (637)
107 3ka7_A Oxidoreductase; structu 98.7 3.6E-07 1.2E-11 95.0 18.3 53 245-300 196-250 (425)
108 3dme_A Conserved exported prot 98.7 3.1E-07 1.1E-11 93.2 17.4 65 244-313 149-216 (369)
109 2bry_A NEDD9 interacting prote 98.7 6.4E-09 2.2E-13 110.8 4.3 153 130-302 37-230 (497)
110 3nrn_A Uncharacterized protein 98.7 6.1E-08 2.1E-12 100.9 11.2 52 244-300 188-241 (421)
111 3cp8_A TRNA uridine 5-carboxym 98.7 2.5E-08 8.6E-13 107.7 8.0 118 26-150 19-182 (641)
112 3v76_A Flavoprotein; structura 98.6 2.8E-08 9.4E-13 103.3 6.7 109 27-142 26-187 (417)
113 2bry_A NEDD9 interacting prote 98.6 3.9E-08 1.3E-12 104.7 8.1 121 26-149 90-237 (497)
114 2gag_B Heterotetrameric sarcos 98.6 1.1E-06 3.6E-11 90.6 18.4 67 229-300 160-228 (405)
115 1rp0_A ARA6, thiazole biosynth 98.6 9.4E-08 3.2E-12 94.0 9.2 116 27-144 38-193 (284)
116 3pl8_A Pyranose 2-oxidase; sub 98.6 1E-08 3.5E-13 112.0 1.7 37 28-64 46-82 (623)
117 3nyc_A D-arginine dehydrogenas 98.6 9.3E-08 3.2E-12 97.7 8.6 63 244-314 153-217 (381)
118 2gf3_A MSOX, monomeric sarcosi 98.6 1.7E-06 6E-11 88.5 18.1 75 220-300 126-203 (389)
119 3i3l_A Alkylhalidase CMLS; fla 98.5 1.2E-06 4E-11 95.0 16.8 37 26-62 21-57 (591)
120 3oz2_A Digeranylgeranylglycero 98.5 3.7E-08 1.3E-12 101.0 4.7 38 26-63 2-39 (397)
121 3nlc_A Uncharacterized protein 98.5 8.4E-08 2.9E-12 102.7 7.1 110 26-143 105-278 (549)
122 1y56_B Sarcosine oxidase; dehy 98.5 6E-06 2.1E-10 84.3 20.7 75 220-300 125-203 (382)
123 1ryi_A Glycine oxidase; flavop 98.5 9.5E-08 3.3E-12 97.8 5.1 37 26-62 15-51 (382)
124 2xdo_A TETX2 protein; tetracyc 98.4 2.4E-07 8.2E-12 95.7 7.9 38 26-63 24-61 (398)
125 2i0z_A NAD(FAD)-utilizing dehy 98.4 2.2E-07 7.5E-12 97.6 7.6 37 27-63 25-61 (447)
126 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 2.5E-07 8.6E-12 93.3 7.6 36 28-63 1-39 (342)
127 3rp8_A Flavoprotein monooxygen 98.4 2E-07 6.7E-12 96.5 6.8 40 24-63 19-58 (407)
128 3nix_A Flavoprotein/dehydrogen 98.4 3.8E-07 1.3E-11 94.7 8.8 35 28-62 5-39 (421)
129 2x3n_A Probable FAD-dependent 98.4 2.7E-07 9.1E-12 95.2 7.2 36 28-63 6-41 (399)
130 3e1t_A Halogenase; flavoprotei 98.4 4.4E-07 1.5E-11 96.9 9.0 35 27-61 6-40 (512)
131 3fmw_A Oxygenase; mithramycin, 98.4 1.8E-07 6.2E-12 101.1 5.5 36 27-62 48-83 (570)
132 1yvv_A Amine oxidase, flavin-c 98.4 4E-07 1.4E-11 91.3 7.6 36 28-63 2-37 (336)
133 3cgv_A Geranylgeranyl reductas 98.4 2E-07 6.7E-12 95.9 5.2 37 27-63 3-39 (397)
134 3ihg_A RDME; flavoenzyme, anth 98.4 7.1E-07 2.4E-11 95.9 9.1 36 27-62 4-39 (535)
135 3ps9_A TRNA 5-methylaminomethy 98.4 7.7E-07 2.6E-11 98.4 9.7 36 27-62 271-306 (676)
136 3da1_A Glycerol-3-phosphate de 98.3 3.3E-06 1.1E-10 91.1 13.8 67 244-314 169-240 (561)
137 3pvc_A TRNA 5-methylaminomethy 98.3 6.7E-06 2.3E-10 91.0 16.4 57 244-303 411-470 (689)
138 1y0p_A Fumarate reductase flav 98.3 1E-06 3.4E-11 95.5 9.1 37 28-64 126-162 (571)
139 2yqu_A 2-oxoglutarate dehydrog 98.3 8.3E-07 2.9E-11 93.3 8.2 102 28-146 167-268 (455)
140 2qa1_A PGAE, polyketide oxygen 98.3 1.3E-06 4.3E-11 93.0 9.5 114 26-142 9-165 (500)
141 3kkj_A Amine oxidase, flavin-c 98.3 2.9E-07 9.9E-12 88.3 4.1 39 28-66 2-40 (336)
142 2vou_A 2,6-dihydroxypyridine h 98.3 6.8E-07 2.3E-11 92.2 7.0 36 27-62 4-39 (397)
143 2gqw_A Ferredoxin reductase; f 98.3 1.8E-06 6.2E-11 89.4 9.8 97 28-144 145-241 (408)
144 2uzz_A N-methyl-L-tryptophan o 98.3 4.6E-07 1.6E-11 92.3 5.2 35 28-62 2-36 (372)
145 3atr_A Conserved archaeal prot 98.3 1.6E-06 5.3E-11 91.2 9.3 113 28-143 6-163 (453)
146 3dje_A Fructosyl amine: oxygen 98.3 1.4E-06 4.7E-11 91.1 8.5 36 27-62 5-41 (438)
147 1k0i_A P-hydroxybenzoate hydro 98.3 9.1E-07 3.1E-11 91.0 6.8 35 28-62 2-36 (394)
148 4a9w_A Monooxygenase; baeyer-v 98.3 2.9E-06 1E-10 85.4 10.3 95 192-304 5-134 (357)
149 2v3a_A Rubredoxin reductase; a 98.2 2E-06 6.9E-11 88.2 9.0 98 28-144 145-245 (384)
150 2qa2_A CABE, polyketide oxygen 98.2 1.5E-06 5E-11 92.5 8.1 111 27-142 11-166 (499)
151 1nhp_A NADH peroxidase; oxidor 98.2 2.3E-06 7.8E-11 89.7 9.5 100 27-146 148-250 (447)
152 1qo8_A Flavocytochrome C3 fuma 98.2 1.3E-06 4.5E-11 94.4 7.6 38 27-64 120-157 (566)
153 2oln_A NIKD protein; flavoprot 98.2 1.1E-06 3.7E-11 90.5 6.4 35 28-62 4-38 (397)
154 1ebd_A E3BD, dihydrolipoamide 98.2 2.8E-06 9.4E-11 89.3 9.4 104 28-145 170-273 (455)
155 2eq6_A Pyruvate dehydrogenase 98.2 2.9E-06 9.8E-11 89.5 9.5 105 28-146 169-275 (464)
156 3axb_A Putative oxidoreductase 98.2 2.3E-06 7.8E-11 89.7 8.7 36 27-62 22-58 (448)
157 1pj5_A N,N-dimethylglycine oxi 98.2 2E-05 6.7E-10 89.2 16.5 54 244-300 150-205 (830)
158 3lzw_A Ferredoxin--NADP reduct 98.2 3.2E-06 1.1E-10 84.3 8.6 92 191-300 8-121 (332)
159 3itj_A Thioredoxin reductase 1 98.2 7.5E-06 2.5E-10 81.8 11.2 97 188-301 20-141 (338)
160 1lvl_A Dihydrolipoamide dehydr 98.2 1.8E-06 6.1E-11 90.9 6.8 101 28-146 171-272 (458)
161 3nlc_A Uncharacterized protein 98.2 7.9E-06 2.7E-10 87.4 11.8 108 191-315 108-289 (549)
162 3ef6_A Toluene 1,2-dioxygenase 98.2 2.3E-06 7.9E-11 88.6 7.5 98 28-144 143-243 (410)
163 2xve_A Flavin-containing monoo 98.2 1.2E-05 4E-10 84.7 13.0 104 191-305 3-169 (464)
164 3fbs_A Oxidoreductase; structu 98.2 4.6E-06 1.6E-10 81.7 9.3 90 27-145 140-229 (297)
165 3lxd_A FAD-dependent pyridine 98.1 4.8E-06 1.7E-10 86.3 9.5 99 28-144 152-253 (415)
166 3alj_A 2-methyl-3-hydroxypyrid 98.1 1.8E-05 6.2E-10 80.8 13.6 92 191-300 12-158 (379)
167 2aqj_A Tryptophan halogenase, 98.1 4.9E-06 1.7E-10 89.4 9.7 35 27-61 4-41 (538)
168 4hb9_A Similarities with proba 98.1 3.9E-06 1.3E-10 86.4 8.4 35 29-63 2-36 (412)
169 3c96_A Flavin-containing monoo 98.1 3E-06 1E-10 87.7 7.1 37 27-63 3-40 (410)
170 1ges_A Glutathione reductase; 98.1 4.4E-06 1.5E-10 87.6 8.4 98 28-145 167-268 (450)
171 3v76_A Flavoprotein; structura 98.1 1.2E-05 4.3E-10 83.2 11.6 96 191-304 28-189 (417)
172 2zbw_A Thioredoxin reductase; 98.1 1.3E-05 4.6E-10 80.0 11.6 93 191-300 6-119 (335)
173 2dkh_A 3-hydroxybenzoate hydro 98.1 9.1E-06 3.1E-10 89.1 11.0 37 27-63 31-68 (639)
174 4eqs_A Coenzyme A disulfide re 98.1 6.8E-06 2.3E-10 85.9 9.5 97 28-145 147-243 (437)
175 1v59_A Dihydrolipoamide dehydr 98.1 8.4E-06 2.9E-10 86.1 10.1 104 28-145 183-290 (478)
176 1zmd_A Dihydrolipoyl dehydroge 98.1 6.8E-06 2.3E-10 86.8 9.4 104 28-145 178-285 (474)
177 3klj_A NAD(FAD)-dependent dehy 98.1 5.5E-06 1.9E-10 85.0 8.2 93 191-300 10-114 (385)
178 3fg2_P Putative rubredoxin red 98.1 6.2E-06 2.1E-10 85.2 8.7 98 28-144 142-243 (404)
179 3d1c_A Flavin-containing putat 98.1 2.5E-05 8.5E-10 79.2 13.0 95 192-304 6-145 (369)
180 3f8d_A Thioredoxin reductase ( 98.1 1.5E-05 5.2E-10 78.9 11.1 93 191-301 16-124 (323)
181 4at0_A 3-ketosteroid-delta4-5a 98.1 8.9E-06 3E-10 86.7 9.8 37 27-63 40-76 (510)
182 3hyw_A Sulfide-quinone reducta 98.1 1.8E-06 6.2E-11 90.0 4.3 95 191-301 3-108 (430)
183 2qcu_A Aerobic glycerol-3-phos 98.1 5.5E-06 1.9E-10 88.1 8.1 35 27-61 2-36 (501)
184 2gmh_A Electron transfer flavo 98.1 3.1E-06 1.1E-10 91.7 6.2 37 27-63 34-76 (584)
185 3h8l_A NADH oxidase; membrane 98.1 4E-06 1.4E-10 86.7 6.8 98 191-301 2-112 (409)
186 1q1r_A Putidaredoxin reductase 98.1 7.8E-06 2.7E-10 85.2 8.9 98 28-144 149-252 (431)
187 1d4d_A Flavocytochrome C fumar 98.1 7.6E-06 2.6E-10 88.5 9.0 37 28-64 126-162 (572)
188 3ab1_A Ferredoxin--NADP reduct 98.0 2.8E-05 9.6E-10 78.7 12.6 94 191-301 15-130 (360)
189 2wdq_A Succinate dehydrogenase 98.0 3.4E-05 1.2E-09 83.6 14.0 58 244-301 142-205 (588)
190 1onf_A GR, grase, glutathione 98.0 1.2E-05 4.2E-10 85.4 10.3 99 28-145 176-278 (500)
191 2cdu_A NADPH oxidase; flavoenz 98.0 9.7E-06 3.3E-10 85.0 9.3 101 28-145 149-250 (452)
192 3c4n_A Uncharacterized protein 98.0 2.1E-06 7.2E-11 88.8 4.2 34 28-61 36-71 (405)
193 4b1b_A TRXR, thioredoxin reduc 98.0 6.5E-06 2.2E-10 88.1 7.7 101 27-145 222-322 (542)
194 2a8x_A Dihydrolipoyl dehydroge 98.0 7.5E-06 2.6E-10 86.2 8.2 102 28-145 171-274 (464)
195 2bc0_A NADH oxidase; flavoprot 98.0 1.1E-05 3.6E-10 85.7 9.3 100 27-145 193-294 (490)
196 3sx6_A Sulfide-quinone reducta 98.0 6.3E-06 2.2E-10 86.1 7.5 95 191-300 5-110 (437)
197 2r0c_A REBC; flavin adenine di 98.0 7.5E-06 2.6E-10 88.1 8.2 36 28-63 26-61 (549)
198 1dxl_A Dihydrolipoamide dehydr 98.0 6.3E-06 2.2E-10 86.9 7.5 105 27-145 176-282 (470)
199 1xhc_A NADH oxidase /nitrite r 98.0 6.9E-06 2.4E-10 83.7 7.4 92 29-144 144-236 (367)
200 3vrd_B FCCB subunit, flavocyto 98.0 6.2E-06 2.1E-10 85.0 7.0 96 190-301 2-107 (401)
201 1trb_A Thioredoxin reductase; 98.0 2.2E-05 7.4E-10 77.9 10.6 103 27-145 144-250 (320)
202 3oc4_A Oxidoreductase, pyridin 98.0 2.3E-05 7.9E-10 82.2 11.2 103 27-147 146-249 (452)
203 3r9u_A Thioredoxin reductase; 98.0 3.9E-05 1.3E-09 75.6 12.4 91 191-300 5-116 (315)
204 2pyx_A Tryptophan halogenase; 98.0 1.7E-05 5.9E-10 84.9 10.3 35 27-61 6-52 (526)
205 3ics_A Coenzyme A-disulfide re 98.0 1.2E-05 4E-10 87.4 9.1 97 28-144 187-284 (588)
206 3urh_A Dihydrolipoyl dehydroge 98.0 1.4E-05 4.9E-10 84.7 9.5 106 27-146 197-304 (491)
207 2r9z_A Glutathione amide reduc 98.0 1.1E-05 3.9E-10 84.8 8.7 99 28-145 166-267 (463)
208 2rgh_A Alpha-glycerophosphate 98.0 0.00013 4.6E-09 78.6 17.3 64 244-311 187-255 (571)
209 1fec_A Trypanothione reductase 98.0 1.3E-05 4.6E-10 84.9 9.0 98 28-145 187-291 (490)
210 2weu_A Tryptophan 5-halogenase 98.0 6.5E-06 2.2E-10 87.8 6.6 34 28-61 2-38 (511)
211 3cgb_A Pyridine nucleotide-dis 98.0 8.9E-06 3E-10 86.0 7.5 100 27-145 185-285 (480)
212 2vdc_G Glutamate synthase [NAD 98.0 9.4E-06 3.2E-10 85.2 7.5 90 188-301 120-218 (456)
213 2qae_A Lipoamide, dihydrolipoy 98.0 1.2E-05 4.1E-10 84.7 8.4 103 27-145 173-279 (468)
214 2wpf_A Trypanothione reductase 98.0 1.2E-05 4.2E-10 85.3 8.4 99 28-145 191-295 (495)
215 1ojt_A Surface protein; redox- 98.0 9.9E-06 3.4E-10 85.7 7.6 102 28-145 185-289 (482)
216 3kd9_A Coenzyme A disulfide re 98.0 2.4E-05 8.2E-10 81.9 10.5 96 191-300 4-112 (449)
217 1fl2_A Alkyl hydroperoxide red 98.0 4.3E-05 1.5E-09 75.4 11.8 93 192-301 3-114 (310)
218 2gqf_A Hypothetical protein HI 98.0 5.4E-05 1.8E-09 78.0 12.8 96 192-305 6-171 (401)
219 2hqm_A GR, grase, glutathione 97.9 1.1E-05 3.8E-10 85.2 7.7 100 27-144 184-287 (479)
220 2e4g_A Tryptophan halogenase; 97.9 1.9E-05 6.4E-10 85.0 9.3 35 27-61 24-61 (550)
221 4gde_A UDP-galactopyranose mut 97.9 3.2E-06 1.1E-10 89.9 3.2 44 24-67 6-50 (513)
222 1vdc_A NTR, NADPH dependent th 97.9 4.5E-05 1.5E-09 76.1 11.4 98 27-145 158-262 (333)
223 3iwa_A FAD-dependent pyridine 97.9 1.5E-05 5.2E-10 84.1 8.3 98 28-144 159-260 (472)
224 3ic9_A Dihydrolipoamide dehydr 97.9 1.5E-05 5E-10 84.7 8.2 105 28-146 174-278 (492)
225 1zk7_A HGII, reductase, mercur 97.9 1.2E-05 4.2E-10 84.6 7.6 98 28-145 176-274 (467)
226 2q0l_A TRXR, thioredoxin reduc 97.9 7.8E-05 2.7E-09 73.6 13.0 91 192-300 3-112 (311)
227 3cty_A Thioredoxin reductase; 97.9 6.3E-05 2.1E-09 74.6 12.3 92 190-300 16-124 (319)
228 3lad_A Dihydrolipoamide dehydr 97.9 3.1E-05 1.1E-09 81.7 10.5 102 27-145 179-283 (476)
229 2q7v_A Thioredoxin reductase; 97.9 5.4E-05 1.8E-09 75.3 11.7 93 191-301 9-122 (325)
230 2a87_A TRXR, TR, thioredoxin r 97.9 8.2E-05 2.8E-09 74.4 12.7 100 27-147 154-257 (335)
231 2gv8_A Monooxygenase; FMO, FAD 97.9 3E-05 1E-09 81.1 9.7 85 27-146 211-296 (447)
232 3ntd_A FAD-dependent pyridine 97.9 2.9E-05 1E-09 83.8 9.9 98 191-300 2-115 (565)
233 1xdi_A RV3303C-LPDA; reductase 97.9 1.6E-05 5.3E-10 84.6 7.5 100 28-145 182-282 (499)
234 3dgh_A TRXR-1, thioredoxin red 97.9 3.7E-05 1.3E-09 81.3 10.1 103 28-145 187-292 (483)
235 1mo9_A ORF3; nucleotide bindin 97.9 2.6E-05 8.8E-10 83.4 8.8 98 29-145 215-319 (523)
236 3dgz_A Thioredoxin reductase 2 97.9 3.3E-05 1.1E-09 81.8 9.5 103 28-145 185-290 (488)
237 3jsk_A Cypbp37 protein; octame 97.9 2E-05 6.8E-10 78.8 7.2 37 28-64 79-117 (344)
238 3o0h_A Glutathione reductase; 97.8 2.5E-05 8.4E-10 82.7 8.2 100 27-146 190-292 (484)
239 1m6i_A Programmed cell death p 97.8 2.5E-05 8.7E-10 82.8 8.1 98 28-144 180-284 (493)
240 3qfa_A Thioredoxin reductase 1 97.8 4.1E-05 1.4E-09 81.7 9.7 104 28-146 210-319 (519)
241 2i0z_A NAD(FAD)-utilizing dehy 97.8 0.00011 3.9E-09 76.7 12.6 98 191-304 27-193 (447)
242 3gwf_A Cyclohexanone monooxyge 97.8 8.1E-05 2.8E-09 79.8 11.6 97 191-304 9-149 (540)
243 4ap3_A Steroid monooxygenase; 97.8 5.3E-05 1.8E-09 81.4 10.0 93 191-300 22-157 (549)
244 1qo8_A Flavocytochrome C3 fuma 97.8 0.00024 8.1E-09 76.7 15.1 55 247-302 252-312 (566)
245 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00013 4.3E-09 78.0 12.7 95 190-301 212-325 (521)
246 3dk9_A Grase, GR, glutathione 97.8 5.5E-05 1.9E-09 79.9 9.7 104 28-145 187-296 (478)
247 3s5w_A L-ornithine 5-monooxyge 97.8 7.2E-05 2.5E-09 78.5 10.4 101 191-300 31-190 (463)
248 3gyx_A Adenylylsulfate reducta 97.8 0.00022 7.5E-09 78.1 14.3 35 28-62 22-62 (662)
249 1k0i_A P-hydroxybenzoate hydro 97.8 0.00022 7.5E-09 73.0 13.6 96 192-301 4-162 (394)
250 3h28_A Sulfide-quinone reducta 97.8 1.4E-05 4.8E-10 83.2 4.6 95 191-301 3-108 (430)
251 3uox_A Otemo; baeyer-villiger 97.8 7E-05 2.4E-09 80.3 10.0 97 191-304 10-149 (545)
252 2x3n_A Probable FAD-dependent 97.8 7.2E-05 2.5E-09 76.8 9.8 93 191-300 7-164 (399)
253 3nks_A Protoporphyrinogen oxid 97.7 1.8E-05 6.1E-10 83.4 5.0 40 28-67 2-43 (477)
254 1y0p_A Fumarate reductase flav 97.7 0.00017 5.9E-09 77.9 12.7 55 246-301 256-316 (571)
255 4a5l_A Thioredoxin reductase; 97.7 0.00012 4.1E-09 72.2 10.2 94 192-302 6-121 (314)
256 2e1m_A L-glutamate oxidase; L- 97.7 2.6E-05 8.7E-10 79.4 5.2 44 24-67 40-84 (376)
257 2bcg_G Secretory pathway GDP d 97.7 2E-05 6.9E-10 82.6 4.4 41 27-67 10-50 (453)
258 1yvv_A Amine oxidase, flavin-c 97.7 0.00029 9.8E-09 70.2 12.5 92 192-300 4-160 (336)
259 2gjc_A Thiazole biosynthetic e 97.7 0.00011 3.6E-09 73.1 9.0 36 29-64 66-103 (326)
260 3k30_A Histamine dehydrogenase 97.7 0.00011 3.8E-09 81.2 9.9 103 27-144 522-626 (690)
261 3nix_A Flavoprotein/dehydrogen 97.6 0.00024 8.1E-09 73.3 11.8 95 191-300 6-164 (421)
262 1s3e_A Amine oxidase [flavin-c 97.6 2.5E-05 8.5E-10 83.4 4.2 70 27-96 3-78 (520)
263 4gcm_A TRXR, thioredoxin reduc 97.6 0.00024 8.3E-09 70.1 11.2 93 192-301 8-115 (312)
264 1rsg_A FMS1 protein; FAD bindi 97.6 1.9E-05 6.6E-10 84.2 3.3 41 27-67 7-48 (516)
265 2b9w_A Putative aminooxidase; 97.6 3E-05 1E-09 80.4 4.5 41 27-67 5-46 (424)
266 4dna_A Probable glutathione re 97.6 0.00011 3.7E-09 77.3 8.9 101 27-146 169-272 (463)
267 1v0j_A UDP-galactopyranose mut 97.6 2.4E-05 8.2E-10 80.6 3.7 41 27-67 6-47 (399)
268 1kf6_A Fumarate reductase flav 97.6 7E-05 2.4E-09 81.3 7.4 35 28-62 5-41 (602)
269 3ihm_A Styrene monooxygenase A 97.6 2.4E-05 8.2E-10 81.5 3.4 35 27-61 21-55 (430)
270 3atr_A Conserved archaeal prot 97.6 0.00019 6.4E-09 75.2 10.3 97 191-301 7-161 (453)
271 1d4d_A Flavocytochrome C fumar 97.6 0.00043 1.5E-08 74.7 13.4 55 246-301 256-316 (572)
272 3i6d_A Protoporphyrinogen oxid 97.6 1.7E-05 5.8E-10 83.2 2.2 39 28-66 5-49 (470)
273 2vou_A 2,6-dihydroxypyridine h 97.6 0.00021 7.2E-09 73.3 10.4 100 191-309 6-158 (397)
274 1cjc_A Protein (adrenodoxin re 97.6 4.1E-05 1.4E-09 80.4 5.0 90 190-301 6-105 (460)
275 3ces_A MNMG, tRNA uridine 5-ca 97.6 0.00031 1.1E-08 76.0 11.8 93 192-301 30-180 (651)
276 2jae_A L-amino acid oxidase; o 97.6 4.3E-05 1.5E-09 80.8 4.9 41 26-66 9-49 (489)
277 2ivd_A PPO, PPOX, protoporphyr 97.6 4.1E-05 1.4E-09 80.7 4.6 42 26-67 14-55 (478)
278 1ryi_A Glycine oxidase; flavop 97.6 0.00042 1.4E-08 70.4 12.0 52 245-300 164-217 (382)
279 3l8k_A Dihydrolipoyl dehydroge 97.6 0.0002 6.9E-09 75.3 9.8 93 192-300 6-142 (466)
280 3cgv_A Geranylgeranyl reductas 97.6 0.00054 1.8E-08 69.9 12.7 96 192-301 6-161 (397)
281 4fk1_A Putative thioredoxin re 97.5 0.00039 1.3E-08 68.4 10.9 92 192-301 8-116 (304)
282 4g6h_A Rotenone-insensitive NA 97.5 0.00012 4.1E-09 77.7 7.3 101 29-143 218-333 (502)
283 3c96_A Flavin-containing monoo 97.5 0.00045 1.6E-08 71.1 11.4 102 191-308 5-173 (410)
284 1pn0_A Phenol 2-monooxygenase; 97.5 0.00012 4.2E-09 80.4 7.4 35 28-62 8-47 (665)
285 2vvm_A Monoamine oxidase N; FA 97.5 6.9E-05 2.4E-09 79.3 5.2 53 245-300 255-310 (495)
286 2yg5_A Putrescine oxidase; oxi 97.5 3.6E-05 1.2E-09 80.5 3.0 69 28-96 5-78 (453)
287 3hdq_A UDP-galactopyranose mut 97.5 6E-05 2.1E-09 77.3 4.4 42 26-67 27-68 (397)
288 3ihg_A RDME; flavoenzyme, anth 97.5 0.00077 2.6E-08 72.1 13.2 56 245-300 120-181 (535)
289 1w4x_A Phenylacetone monooxyge 97.5 0.00059 2E-08 73.1 12.3 98 191-305 17-157 (542)
290 3lov_A Protoporphyrinogen oxid 97.5 5.7E-05 1.9E-09 79.5 4.2 40 27-66 3-44 (475)
291 1sez_A Protoporphyrinogen oxid 97.5 7.6E-05 2.6E-09 79.2 5.1 41 27-67 12-52 (504)
292 1c0p_A D-amino acid oxidase; a 97.5 6.4E-05 2.2E-09 76.1 4.2 35 27-61 5-39 (363)
293 2x8g_A Thioredoxin glutathione 97.5 0.0003 1E-08 76.4 9.7 104 28-145 286-398 (598)
294 2bi7_A UDP-galactopyranose mut 97.4 8.2E-05 2.8E-09 76.2 4.9 39 28-66 3-41 (384)
295 3e1t_A Halogenase; flavoprotei 97.4 0.00065 2.2E-08 72.3 11.9 96 191-301 8-171 (512)
296 2uzz_A N-methyl-L-tryptophan o 97.4 0.00071 2.4E-08 68.4 11.6 52 246-301 150-203 (372)
297 2zxi_A TRNA uridine 5-carboxym 97.4 0.00088 3E-08 72.2 12.7 93 192-301 29-179 (637)
298 1lqt_A FPRA; NADP+ derivative, 97.4 7E-05 2.4E-09 78.5 3.8 93 191-301 4-107 (456)
299 2iid_A L-amino-acid oxidase; f 97.4 8.3E-05 2.9E-09 78.8 4.4 70 26-95 31-107 (498)
300 3oz2_A Digeranylgeranylglycero 97.4 0.00077 2.6E-08 68.4 11.6 95 192-300 6-160 (397)
301 3rp8_A Flavoprotein monooxygen 97.4 0.00082 2.8E-08 69.1 11.6 94 188-300 21-179 (407)
302 1i8t_A UDP-galactopyranose mut 97.4 9.1E-05 3.1E-09 75.3 4.3 38 29-66 2-39 (367)
303 3qj4_A Renalase; FAD/NAD(P)-bi 97.4 0.00061 2.1E-08 68.2 10.2 94 192-299 3-162 (342)
304 2qcu_A Aerobic glycerol-3-phos 97.4 0.0015 5E-08 69.3 13.5 62 246-311 150-215 (501)
305 2oln_A NIKD protein; flavoprot 97.3 0.0023 8E-08 65.3 14.4 50 247-300 155-206 (397)
306 3c4a_A Probable tryptophan hyd 97.3 9.1E-05 3.1E-09 75.7 3.3 35 29-63 1-37 (381)
307 1gte_A Dihydropyrimidine dehyd 97.3 0.00012 4E-09 84.6 4.4 90 189-300 186-285 (1025)
308 2qa2_A CABE, polyketide oxygen 97.3 0.0022 7.4E-08 68.0 13.8 97 189-300 11-164 (499)
309 3cp8_A TRNA uridine 5-carboxym 97.3 0.0017 5.8E-08 70.2 12.7 94 191-301 22-173 (641)
310 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00013 4.4E-09 76.4 3.9 55 245-301 256-313 (475)
311 3fmw_A Oxygenase; mithramycin, 97.3 0.0013 4.4E-08 70.9 11.7 94 192-300 51-205 (570)
312 2qa1_A PGAE, polyketide oxygen 97.3 0.003 1E-07 66.9 14.4 97 189-300 10-163 (500)
313 1y56_A Hypothetical protein PH 97.2 0.00036 1.2E-08 73.8 6.9 95 191-301 109-218 (493)
314 3ps9_A TRNA 5-methylaminomethy 97.2 0.0018 6.3E-08 71.2 12.8 52 247-301 419-472 (676)
315 4dsg_A UDP-galactopyranose mut 97.2 0.00016 5.6E-09 76.4 4.1 41 27-67 8-49 (484)
316 3g5s_A Methylenetetrahydrofola 97.2 0.00017 5.7E-09 72.9 3.7 34 28-61 1-34 (443)
317 2gmh_A Electron transfer flavo 97.2 0.0035 1.2E-07 67.7 14.3 68 246-315 145-229 (584)
318 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00093 3.2E-08 73.6 9.8 99 27-144 493-630 (671)
319 3g3e_A D-amino-acid oxidase; F 97.2 0.00011 3.8E-09 73.9 2.2 33 29-61 1-39 (351)
320 4at0_A 3-ketosteroid-delta4-5a 97.1 0.0027 9.4E-08 67.3 12.7 54 246-301 203-263 (510)
321 1d5t_A Guanine nucleotide diss 97.1 0.00025 8.4E-09 73.8 4.4 41 27-67 5-45 (433)
322 2z3y_A Lysine-specific histone 97.1 0.00029 9.8E-09 77.5 5.1 42 25-66 104-145 (662)
323 1o94_A Tmadh, trimethylamine d 97.1 0.0005 1.7E-08 76.4 6.8 103 28-144 528-648 (729)
324 2xag_A Lysine-specific histone 97.1 0.00031 1.1E-08 78.9 5.1 41 26-66 276-316 (852)
325 2xdo_A TETX2 protein; tetracyc 97.1 0.0014 4.8E-08 67.1 9.5 94 191-301 27-181 (398)
326 2gag_A Heterotetrameric sarcos 97.1 0.0016 5.5E-08 74.6 10.5 97 191-301 129-252 (965)
327 4g65_A TRK system potassium up 97.0 0.0033 1.1E-07 65.7 11.2 34 28-61 3-36 (461)
328 4hb9_A Similarities with proba 97.0 0.0015 5.3E-08 66.6 8.4 35 191-239 2-36 (412)
329 4gut_A Lysine-specific histone 96.9 0.0004 1.4E-08 77.4 3.9 40 26-65 334-373 (776)
330 2dkh_A 3-hydroxybenzoate hydro 96.9 0.0034 1.2E-07 68.6 11.1 55 246-300 142-209 (639)
331 4b63_A L-ornithine N5 monooxyg 96.9 0.0043 1.5E-07 65.7 11.4 113 192-306 41-216 (501)
332 1b37_A Protein (polyamine oxid 96.9 0.00048 1.6E-08 72.4 4.1 40 28-67 4-44 (472)
333 3dje_A Fructosyl amine: oxygen 96.9 0.0073 2.5E-07 62.5 13.1 54 246-301 162-220 (438)
334 3c4n_A Uncharacterized protein 96.9 0.004 1.4E-07 63.9 10.9 50 247-300 174-234 (405)
335 1chu_A Protein (L-aspartate ox 96.9 0.00058 2E-08 73.1 4.5 35 28-63 8-42 (540)
336 1kf6_A Fumarate reductase flav 96.9 0.0082 2.8E-07 65.0 13.3 55 247-301 136-196 (602)
337 3c4a_A Probable tryptophan hyd 96.8 0.0013 4.4E-08 67.0 6.4 86 192-301 2-142 (381)
338 2bs2_A Quinol-fumarate reducta 96.8 0.00065 2.2E-08 74.3 4.1 35 28-62 5-39 (660)
339 2h88_A Succinate dehydrogenase 96.7 0.00058 2E-08 74.2 3.2 35 27-61 17-51 (621)
340 2gjc_A Thiazole biosynthetic e 96.7 0.022 7.5E-07 56.3 14.2 140 191-343 66-294 (326)
341 2aqj_A Tryptophan halogenase, 96.7 0.0072 2.5E-07 64.5 11.6 51 247-301 167-221 (538)
342 2r0c_A REBC; flavin adenine di 96.7 0.007 2.4E-07 64.8 11.4 52 246-300 139-194 (549)
343 3jsk_A Cypbp37 protein; octame 96.7 0.014 4.9E-07 58.1 12.5 138 191-343 80-304 (344)
344 1jnr_A Adenylylsulfate reducta 96.6 0.001 3.5E-08 72.8 4.1 34 28-61 22-59 (643)
345 3ayj_A Pro-enzyme of L-phenyla 96.5 0.00071 2.4E-08 74.1 2.0 36 28-63 56-100 (721)
346 1kdg_A CDH, cellobiose dehydro 96.4 0.0016 5.6E-08 69.7 3.7 36 27-62 6-41 (546)
347 2e5v_A L-aspartate oxidase; ar 96.3 0.019 6.4E-07 60.2 11.6 52 247-301 121-175 (472)
348 3t37_A Probable dehydrogenase; 96.3 0.0025 8.6E-08 67.8 4.4 36 27-62 16-52 (526)
349 2e4g_A Tryptophan halogenase; 96.2 0.032 1.1E-06 59.7 13.0 52 246-301 195-251 (550)
350 3fwz_A Inner membrane protein 96.0 0.0049 1.7E-07 53.0 4.2 37 24-60 3-39 (140)
351 1ju2_A HydroxynitrIle lyase; f 95.9 0.0037 1.3E-07 66.8 3.7 35 27-62 25-59 (536)
352 2g1u_A Hypothetical protein TM 95.9 0.0052 1.8E-07 53.9 3.8 39 23-61 14-52 (155)
353 3q9t_A Choline dehydrogenase a 95.9 0.0059 2E-07 65.7 4.9 36 27-62 5-41 (577)
354 2h88_A Succinate dehydrogenase 95.8 0.058 2E-06 58.4 12.6 54 248-301 158-216 (621)
355 1pn0_A Phenol 2-monooxygenase; 95.8 0.053 1.8E-06 59.4 12.1 20 192-211 10-29 (665)
356 2bs2_A Quinol-fumarate reducta 95.7 0.062 2.1E-06 58.7 12.3 55 247-301 160-219 (660)
357 2weu_A Tryptophan 5-halogenase 95.6 0.055 1.9E-06 57.1 11.4 53 245-301 173-229 (511)
358 1n4w_A CHOD, cholesterol oxida 95.6 0.0059 2E-07 64.7 3.4 37 28-64 5-41 (504)
359 1coy_A Cholesterol oxidase; ox 95.5 0.0069 2.4E-07 64.2 3.8 37 27-63 10-46 (507)
360 3lk7_A UDP-N-acetylmuramoylala 95.5 0.019 6.6E-07 59.8 7.0 35 27-61 8-42 (451)
361 3qvp_A Glucose oxidase; oxidor 95.5 0.0093 3.2E-07 64.1 4.7 35 27-61 18-53 (583)
362 1id1_A Putative potassium chan 95.4 0.01 3.5E-07 51.7 3.9 34 27-60 2-35 (153)
363 3kkj_A Amine oxidase, flavin-c 95.3 0.012 4.1E-07 55.3 4.5 34 192-239 4-37 (336)
364 1chu_A Protein (L-aspartate ox 95.3 0.041 1.4E-06 58.6 9.1 49 254-302 147-208 (540)
365 3fim_B ARYL-alcohol oxidase; A 95.3 0.0076 2.6E-07 64.6 3.3 36 28-63 2-38 (566)
366 3llv_A Exopolyphosphatase-rela 95.3 0.01 3.4E-07 50.9 3.3 34 27-60 5-38 (141)
367 1gpe_A Protein (glucose oxidas 95.3 0.01 3.5E-07 64.0 4.1 38 26-63 22-60 (587)
368 2jbv_A Choline oxidase; alcoho 95.3 0.013 4.3E-07 62.8 4.7 37 27-63 12-49 (546)
369 3ic5_A Putative saccharopine d 95.2 0.01 3.6E-07 48.7 3.2 33 28-60 5-38 (118)
370 3eag_A UDP-N-acetylmuramate:L- 95.2 0.032 1.1E-06 55.4 7.1 36 27-62 3-39 (326)
371 1lss_A TRK system potassium up 95.1 0.013 4.6E-07 49.7 3.6 33 28-60 4-36 (140)
372 4gut_A Lysine-specific histone 94.8 0.2 6.7E-06 55.7 12.8 39 258-299 542-582 (776)
373 1jnr_A Adenylylsulfate reducta 94.3 0.16 5.4E-06 55.4 10.5 51 252-302 158-218 (643)
374 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.032 1.1E-06 52.0 4.1 35 26-60 29-63 (223)
375 2hmt_A YUAA protein; RCK, KTN, 94.2 0.022 7.5E-07 48.5 2.7 33 28-60 6-38 (144)
376 1f0y_A HCDH, L-3-hydroxyacyl-C 94.1 0.035 1.2E-06 54.4 4.3 35 27-61 14-48 (302)
377 1vg0_A RAB proteins geranylger 93.9 0.039 1.3E-06 59.6 4.5 40 27-66 7-46 (650)
378 3qvo_A NMRA family protein; st 93.7 0.043 1.5E-06 51.4 4.0 39 23-61 18-58 (236)
379 3fpz_A Thiazole biosynthetic e 93.6 0.043 1.5E-06 54.3 4.0 67 191-269 66-140 (326)
380 3c85_A Putative glutathione-re 93.6 0.038 1.3E-06 49.6 3.3 34 27-60 38-72 (183)
381 1kyq_A Met8P, siroheme biosynt 93.2 0.035 1.2E-06 53.4 2.4 35 27-61 12-46 (274)
382 3vtf_A UDP-glucose 6-dehydroge 93.2 0.058 2E-06 55.5 4.2 39 23-61 16-54 (444)
383 3oj0_A Glutr, glutamyl-tRNA re 92.9 0.091 3.1E-06 45.0 4.5 33 28-60 21-53 (144)
384 2x5o_A UDP-N-acetylmuramoylala 92.9 0.052 1.8E-06 56.2 3.4 35 28-62 5-39 (439)
385 3lk7_A UDP-N-acetylmuramoylala 92.9 0.2 6.8E-06 52.0 7.8 75 189-301 8-83 (451)
386 4dgk_A Phytoene dehydrogenase; 92.8 0.059 2E-06 56.6 3.7 36 191-240 2-37 (501)
387 3l4b_C TRKA K+ channel protien 92.6 0.058 2E-06 49.9 3.0 31 30-60 2-32 (218)
388 3ius_A Uncharacterized conserv 92.5 0.08 2.7E-06 50.9 4.0 34 28-61 5-38 (286)
389 4e12_A Diketoreductase; oxidor 92.4 0.09 3.1E-06 50.9 4.2 35 27-61 3-37 (283)
390 3e8x_A Putative NAD-dependent 92.4 0.073 2.5E-06 49.7 3.4 36 26-61 19-55 (236)
391 3i3l_A Alkylhalidase CMLS; fla 92.2 0.11 3.7E-06 56.0 4.9 34 191-238 24-57 (591)
392 4ffl_A PYLC; amino acid, biosy 92.2 0.087 3E-06 52.9 3.9 35 28-62 1-35 (363)
393 4dio_A NAD(P) transhydrogenase 92.1 0.096 3.3E-06 53.1 4.1 36 27-62 189-224 (405)
394 3gpi_A NAD-dependent epimerase 92.1 0.091 3.1E-06 50.6 3.8 36 27-62 2-37 (286)
395 2pyx_A Tryptophan halogenase; 92.0 0.068 2.3E-06 56.7 3.0 45 191-237 8-52 (526)
396 3i83_A 2-dehydropantoate 2-red 92.0 0.094 3.2E-06 51.7 3.8 32 29-60 3-34 (320)
397 3eag_A UDP-N-acetylmuramate:L- 92.0 0.43 1.5E-05 47.1 8.6 72 190-301 4-77 (326)
398 2ew2_A 2-dehydropantoate 2-red 91.9 0.097 3.3E-06 51.1 3.7 33 28-60 3-35 (316)
399 3doj_A AT3G25530, dehydrogenas 91.8 0.11 3.8E-06 50.9 4.1 37 25-61 18-54 (310)
400 1evy_A Glycerol-3-phosphate de 91.7 0.11 3.9E-06 52.1 4.2 34 28-61 15-48 (366)
401 2iid_A L-amino-acid oxidase; f 91.6 0.17 5.8E-06 53.0 5.5 60 190-263 33-110 (498)
402 2i6t_A Ubiquitin-conjugating e 91.5 0.097 3.3E-06 51.2 3.2 35 27-61 13-49 (303)
403 3dfz_A SIRC, precorrin-2 dehyd 91.4 0.13 4.3E-06 47.9 3.8 108 189-342 30-141 (223)
404 2pzm_A Putative nucleotide sug 91.4 0.17 5.9E-06 49.8 5.1 39 23-61 15-54 (330)
405 1pzg_A LDH, lactate dehydrogen 91.4 0.12 4.1E-06 51.3 3.8 34 28-61 9-43 (331)
406 1lld_A L-lactate dehydrogenase 91.4 0.12 4.2E-06 50.8 3.8 34 28-61 7-42 (319)
407 3p2y_A Alanine dehydrogenase/p 91.2 0.099 3.4E-06 52.6 3.0 35 27-61 183-217 (381)
408 3ghy_A Ketopantoate reductase 91.0 0.12 4.3E-06 51.2 3.6 33 28-60 3-35 (335)
409 3dhn_A NAD-dependent epimerase 91.0 0.16 5.6E-06 46.8 4.1 35 28-62 4-39 (227)
410 2a9f_A Putative malic enzyme ( 91.0 0.13 4.4E-06 51.7 3.5 35 26-60 186-221 (398)
411 3hn2_A 2-dehydropantoate 2-red 91.0 0.11 3.6E-06 51.1 2.9 32 29-60 3-34 (312)
412 3pid_A UDP-glucose 6-dehydroge 90.9 0.17 5.8E-06 52.0 4.4 37 24-61 32-68 (432)
413 3k96_A Glycerol-3-phosphate de 90.9 0.17 6E-06 50.6 4.5 35 27-61 28-62 (356)
414 1bg6_A N-(1-D-carboxylethyl)-L 90.8 0.15 5E-06 51.0 3.9 33 28-60 4-36 (359)
415 4gde_A UDP-galactopyranose mut 90.7 0.23 8E-06 52.0 5.5 37 191-240 11-47 (513)
416 3gg2_A Sugar dehydrogenase, UD 90.7 0.15 5.2E-06 52.8 3.9 33 29-61 3-35 (450)
417 2raf_A Putative dinucleotide-b 90.7 0.18 6.2E-06 46.3 4.0 37 26-62 17-53 (209)
418 3ihm_A Styrene monooxygenase A 90.5 0.17 5.9E-06 52.0 4.2 33 191-237 23-55 (430)
419 3nrn_A Uncharacterized protein 90.5 0.21 7.1E-06 51.1 4.8 34 192-239 2-35 (421)
420 1vl6_A Malate oxidoreductase; 90.4 0.15 5.2E-06 51.1 3.5 35 26-60 190-225 (388)
421 4id9_A Short-chain dehydrogena 90.4 0.14 4.8E-06 50.7 3.2 37 26-62 17-54 (347)
422 3gvi_A Malate dehydrogenase; N 90.3 0.19 6.4E-06 49.6 4.1 36 26-61 5-41 (324)
423 1hdo_A Biliverdin IX beta redu 90.3 0.19 6.4E-06 45.4 3.7 33 29-61 4-37 (206)
424 3vps_A TUNA, NAD-dependent epi 90.2 0.19 6.3E-06 49.0 3.9 36 27-62 6-42 (321)
425 1x13_A NAD(P) transhydrogenase 90.2 0.18 6E-06 51.5 3.8 35 27-61 171-205 (401)
426 3tl2_A Malate dehydrogenase; c 90.2 0.2 6.9E-06 49.2 4.1 34 27-60 7-41 (315)
427 2dpo_A L-gulonate 3-dehydrogen 90.2 0.17 5.8E-06 49.9 3.5 35 27-61 5-39 (319)
428 3qha_A Putative oxidoreductase 90.1 0.23 7.8E-06 48.3 4.4 35 28-62 15-49 (296)
429 3k6j_A Protein F01G10.3, confi 90.0 0.24 8.4E-06 51.2 4.7 39 24-62 50-88 (460)
430 3g79_A NDP-N-acetyl-D-galactos 90.0 0.19 6.5E-06 52.4 3.9 36 27-62 17-54 (478)
431 2vns_A Metalloreductase steap3 90.0 0.17 5.8E-06 46.7 3.2 34 27-60 27-60 (215)
432 1zcj_A Peroxisomal bifunctiona 89.9 0.26 8.9E-06 51.3 4.9 36 26-61 35-70 (463)
433 4huj_A Uncharacterized protein 89.9 0.11 3.9E-06 48.1 2.0 36 26-61 21-57 (220)
434 2aef_A Calcium-gated potassium 89.9 0.18 6.2E-06 47.0 3.4 34 27-61 8-41 (234)
435 3ka7_A Oxidoreductase; structu 89.9 0.25 8.4E-06 50.4 4.7 34 192-239 2-35 (425)
436 2hjr_A Malate dehydrogenase; m 89.8 0.22 7.5E-06 49.3 4.1 34 28-61 14-48 (328)
437 1ks9_A KPA reductase;, 2-dehyd 89.8 0.21 7.3E-06 48.0 4.0 33 30-62 2-34 (291)
438 1l7d_A Nicotinamide nucleotide 89.7 0.23 7.8E-06 50.3 4.2 35 27-61 171-205 (384)
439 3ego_A Probable 2-dehydropanto 89.7 0.24 8.3E-06 48.4 4.3 33 28-61 2-34 (307)
440 3dme_A Conserved exported prot 89.7 0.25 8.7E-06 49.0 4.5 33 192-238 6-38 (369)
441 3g0o_A 3-hydroxyisobutyrate de 89.6 0.22 7.4E-06 48.6 3.9 35 27-61 6-40 (303)
442 3i6d_A Protoporphyrinogen oxid 89.6 0.23 8E-06 51.2 4.3 41 191-239 6-46 (470)
443 3r6d_A NAD-dependent epimerase 89.5 0.26 8.9E-06 45.3 4.1 33 28-60 5-39 (221)
444 3l6d_A Putative oxidoreductase 89.4 0.27 9.4E-06 48.0 4.4 36 26-61 7-42 (306)
445 1t2d_A LDH-P, L-lactate dehydr 89.4 0.26 8.8E-06 48.6 4.2 34 28-61 4-38 (322)
446 1pjq_A CYSG, siroheme synthase 89.2 0.19 6.6E-06 52.2 3.3 34 27-60 11-44 (457)
447 3k7m_X 6-hydroxy-L-nicotine ox 89.2 0.27 9.3E-06 50.2 4.4 34 192-239 3-36 (431)
448 2y0c_A BCEC, UDP-glucose dehyd 89.2 0.23 7.9E-06 51.8 3.9 34 28-61 8-41 (478)
449 2ewd_A Lactate dehydrogenase,; 89.1 0.23 7.9E-06 48.9 3.6 34 28-61 4-38 (317)
450 1vl0_A DTDP-4-dehydrorhamnose 89.1 0.27 9.4E-06 47.2 4.1 40 21-60 5-45 (292)
451 3fwz_A Inner membrane protein 89.1 0.7 2.4E-05 39.1 6.3 73 191-299 8-80 (140)
452 1pjc_A Protein (L-alanine dehy 88.9 0.25 8.7E-06 49.5 3.8 34 28-61 167-200 (361)
453 1ur5_A Malate dehydrogenase; o 88.9 0.27 9.2E-06 48.2 3.9 33 29-61 3-36 (309)
454 3p7m_A Malate dehydrogenase; p 88.9 0.3 1E-05 48.1 4.2 36 26-61 3-39 (321)
455 2b9w_A Putative aminooxidase; 88.9 0.33 1.1E-05 49.5 4.8 35 191-239 7-42 (424)
456 3g17_A Similar to 2-dehydropan 88.9 0.14 4.8E-06 49.8 1.9 34 28-61 2-35 (294)
457 3g5s_A Methylenetetrahydrofola 88.9 0.32 1.1E-05 49.2 4.4 32 192-237 3-34 (443)
458 2e1m_A L-glutamate oxidase; L- 88.7 0.37 1.3E-05 48.6 4.9 37 189-239 43-80 (376)
459 3dtt_A NADP oxidoreductase; st 88.7 0.27 9.3E-06 46.3 3.7 37 25-61 16-52 (245)
460 2g1u_A Hypothetical protein TM 88.7 0.48 1.6E-05 40.9 5.1 37 188-238 17-53 (155)
461 1zej_A HBD-9, 3-hydroxyacyl-CO 88.7 0.32 1.1E-05 47.2 4.3 35 26-61 10-44 (293)
462 2gag_B Heterotetrameric sarcos 88.7 0.36 1.2E-05 48.7 4.8 32 192-237 23-56 (405)
463 3i6i_A Putative leucoanthocyan 88.6 0.24 8E-06 49.2 3.4 36 26-61 8-44 (346)
464 2b69_A UDP-glucuronate decarbo 88.6 0.27 9.3E-06 48.6 3.8 36 26-61 25-61 (343)
465 2o3j_A UDP-glucose 6-dehydroge 88.6 0.24 8.1E-06 51.9 3.5 35 27-61 8-44 (481)
466 3nks_A Protoporphyrinogen oxid 88.6 0.28 9.4E-06 51.0 4.0 35 191-239 3-39 (477)
467 1jw9_B Molybdopterin biosynthe 88.5 0.24 8.1E-06 46.9 3.1 34 28-61 31-65 (249)
468 3l9w_A Glutathione-regulated p 88.4 0.25 8.4E-06 50.6 3.4 34 28-61 4-37 (413)
469 2h78_A Hibadh, 3-hydroxyisobut 88.3 0.26 8.8E-06 48.0 3.3 34 28-61 3-36 (302)
470 1dlj_A UDP-glucose dehydrogena 88.3 0.39 1.3E-05 49.0 4.7 31 30-61 2-32 (402)
471 1rsg_A FMS1 protein; FAD bindi 88.3 0.33 1.1E-05 51.1 4.4 35 191-239 9-44 (516)
472 1nyt_A Shikimate 5-dehydrogena 88.2 0.33 1.1E-05 46.6 3.9 34 27-60 118-151 (271)
473 2v6b_A L-LDH, L-lactate dehydr 88.2 0.3 1E-05 47.8 3.7 33 29-61 1-35 (304)
474 3ew7_A LMO0794 protein; Q8Y8U8 88.2 0.31 1.1E-05 44.5 3.6 32 30-61 2-34 (221)
475 3ado_A Lambda-crystallin; L-gu 88.1 0.29 9.9E-06 48.1 3.5 34 28-61 6-39 (319)
476 2gf3_A MSOX, monomeric sarcosi 88.1 0.35 1.2E-05 48.5 4.3 33 192-238 5-37 (389)
477 2uyy_A N-PAC protein; long-cha 88.1 0.33 1.1E-05 47.5 4.0 34 28-61 30-63 (316)
478 1y1p_A ARII, aldehyde reductas 88.1 0.42 1.4E-05 46.9 4.8 36 25-60 8-44 (342)
479 1y6j_A L-lactate dehydrogenase 88.1 0.32 1.1E-05 47.9 3.8 34 28-61 7-42 (318)
480 1y56_B Sarcosine oxidase; dehy 88.0 0.36 1.2E-05 48.4 4.3 33 191-237 6-38 (382)
481 2egg_A AROE, shikimate 5-dehyd 88.0 0.41 1.4E-05 46.6 4.5 34 27-60 140-174 (297)
482 3phh_A Shikimate dehydrogenase 88.0 0.37 1.3E-05 46.1 4.1 34 28-61 118-151 (269)
483 1z82_A Glycerol-3-phosphate de 88.0 0.32 1.1E-05 48.1 3.8 34 27-60 13-46 (335)
484 3q2o_A Phosphoribosylaminoimid 87.9 0.43 1.5E-05 48.3 4.8 37 26-62 12-48 (389)
485 1s3e_A Amine oxidase [flavin-c 87.9 0.38 1.3E-05 50.7 4.5 39 259-300 226-266 (520)
486 4dll_A 2-hydroxy-3-oxopropiona 87.8 0.32 1.1E-05 47.8 3.7 35 27-61 30-64 (320)
487 2eez_A Alanine dehydrogenase; 87.8 0.33 1.1E-05 48.8 3.8 34 27-60 165-198 (369)
488 2pv7_A T-protein [includes: ch 87.8 0.55 1.9E-05 45.6 5.3 34 28-61 21-55 (298)
489 4e21_A 6-phosphogluconate dehy 87.7 0.34 1.2E-05 48.5 3.9 36 26-61 20-55 (358)
490 4ezb_A Uncharacterized conserv 87.7 0.34 1.2E-05 47.6 3.8 35 27-61 23-58 (317)
491 1rpn_A GDP-mannose 4,6-dehydra 87.7 0.35 1.2E-05 47.5 3.9 40 23-62 9-49 (335)
492 2jae_A L-amino acid oxidase; o 87.6 0.45 1.5E-05 49.6 4.9 37 190-240 11-47 (489)
493 1jay_A Coenzyme F420H2:NADP+ o 87.6 0.41 1.4E-05 43.7 4.1 31 30-60 2-33 (212)
494 3pdu_A 3-hydroxyisobutyrate de 87.6 0.21 7.2E-06 48.3 2.1 34 28-61 1-34 (287)
495 3g3e_A D-amino-acid oxidase; F 87.5 0.46 1.6E-05 47.1 4.7 38 192-237 2-39 (351)
496 2qyt_A 2-dehydropantoate 2-red 87.4 0.23 8E-06 48.5 2.4 31 29-59 9-45 (317)
497 3pef_A 6-phosphogluconate dehy 87.4 0.35 1.2E-05 46.7 3.6 33 29-61 2-34 (287)
498 1c0p_A D-amino acid oxidase; a 87.3 0.47 1.6E-05 47.2 4.6 32 191-236 7-38 (363)
499 4b4o_A Epimerase family protei 87.3 0.36 1.2E-05 46.7 3.6 33 29-61 1-34 (298)
500 2ahr_A Putative pyrroline carb 87.3 0.56 1.9E-05 44.4 4.9 33 28-60 3-35 (259)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=5.5e-79 Score=653.49 Aligned_cols=433 Identities=40% Similarity=0.704 Sum_probs=377.5
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEE
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAE 103 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 103 (547)
....+++|||||||+||+++|+.|++.+++|||||++++|.|+|++|+++.|.++++++..++++++.....+++|++++
T Consensus 38 ~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 38 QHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 117 (502)
T ss_dssp CSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEE
T ss_pred CCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999998876554469999999
Q ss_pred EEEEECCCCEEEEecCCC-------------CCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHH
Q 041537 104 AIKIDAAKNEVFCKSNID-------------KETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTV 170 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~-------------~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l 170 (547)
|+.||+++++|++.+... ...+..+++||+||||||+++++|++||+.++++++++++||.++++++
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l 197 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTF 197 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHH
Confidence 999999999998864210 0011348999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHH
Q 041537 171 TDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSF 250 (547)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~ 250 (547)
...++.+......+++++..++++|||||++|+|+|.+|.++.++.+.+.||.+..+.+|+|+++.++++|.++++++++
T Consensus 198 ~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~ 277 (502)
T 4g6h_A 198 AANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSY 277 (502)
T ss_dssp HHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHH
T ss_pred HHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHH
Confidence 99999998776666778888999999999999999999999999888888887777789999999999999999999999
Q ss_pred HHHHHHhCCcEEEcCceEEEEeCCeEEEEec-cCCe--EEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCC
Q 041537 251 AEKKFQRDGIEVLTECRVVNVSDKEITMKIK-STGA--VCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNE 325 (547)
Q Consensus 251 ~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~--~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~ 325 (547)
+.+.|+++||+++++++|++++++.+.+... .+|+ ..+|++|+||||+|++++|.+.++...++. +.+|+|.||+
T Consensus 278 ~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~ 357 (502)
T 4g6h_A 278 AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND 357 (502)
T ss_dssp HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT
T ss_pred HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC
Confidence 9999999999999999999999998877642 3343 235999999999999989888788777665 6778999999
Q ss_pred CCCcCCCCCEEEeCccCccCcccchhhhhHhhhhcccCCCCCcchhhhhhhhhhhhhcchhhHHhhhcccccccccccCC
Q 041537 326 WLRVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKD 405 (547)
Q Consensus 326 ~l~~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (547)
+||++++|||||+||||..
T Consensus 358 ~lq~~~~~~IfAiGD~a~~------------------------------------------------------------- 376 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFA------------------------------------------------------------- 376 (502)
T ss_dssp TSBBTTCSSEEECGGGEES-------------------------------------------------------------
T ss_pred ccccCCCCCEEEEEcccCC-------------------------------------------------------------
Confidence 9999999999999999873
Q ss_pred CCCCCCcccchhhhhhhhccccccCCCCCchhHHHHHHHHHHHHHHhhhhccCCC-------CCCC-ccccCCCCCCCCC
Q 041537 406 PQGNPRREVDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEH-------PEGP-RRFRGLGRHHFRP 477 (547)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~aq~A~~qg~~~a~~i~~~~~~~~~-------~~~~-~~~~~~~~~~~~p 477 (547)
++|++||+|+|||+++|+||.+..+.+.. .... ..+.+ .+++|
T Consensus 377 --------------------------~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p 427 (502)
T 4g6h_A 377 --------------------------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEE---NNFKP 427 (502)
T ss_dssp --------------------------SSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHH---TTCCC
T ss_pred --------------------------CCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcC---CCCCC
Confidence 47899999999999999999876542210 0000 01112 47889
Q ss_pred CeeccccceEEccCcceeeecCCc----ccchhHHHHHHHHHHHHHhccchhHHHHHHHHHHHhhhcCcCCCC
Q 041537 478 FRYKHFGQFAPLGGEQAAAELPGD----WVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSR 546 (547)
Q Consensus 478 f~~~~~G~~~~lG~~~av~~~~~~----~~~~g~~a~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 546 (547)
|+|+++|+|+|||+++||+++++. +...|++||++||++|++++++||+|++++++|+++++||||+||
T Consensus 428 F~y~~~G~~a~lG~~~av~~~~~~~~~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 428 FKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp CCCCCCEEEEECSTTCEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred CEecCcceEEEEeCCceEEEccCCCccceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 999999999999999999998642 234699999999999999999999999999999999999999998
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.6e-55 Score=464.54 Aligned_cols=398 Identities=19% Similarity=0.280 Sum_probs=313.4
Q ss_pred CCeEEEECCchHHHHHHHhcCC--CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV--SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~--~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
.|+|||||||+||+++|.+|++ .+++|||||+++++.|+|++++++.|..+++++..++++++++.+ ++|++++|+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g--v~~i~~~v~ 79 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC--cEEEEeEEE
Confidence 3689999999999999999984 458999999999999999999999999999999999999998887 899999999
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHH
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEE 185 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 185 (547)
.||+++++|++++ |+ +++||+||||||+++. +++||+.++++.+++.+++.++++++.+...
T Consensus 80 ~Id~~~~~V~~~~----g~---~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~---------- 141 (430)
T 3hyw_A 80 SIDPDANTVTTQS----GK---KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYA---------- 141 (430)
T ss_dssp EEETTTTEEEETT----CC---EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHH----------
T ss_pred EEECCCCEEEECC----CC---EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhcc----------
Confidence 9999999999986 54 8999999999999864 6799999999999999999999998865422
Q ss_pred HHhccccEEEEcCChhHHHHHHHHHHHH---HHhhhhhCCCCCCCceEEEEecCCccCC---cccHHHHHHHHHHHHhCC
Q 041537 186 ERKRNLHFVIVGGGPTGVEFAAELHDYI---QEDLINLYPTVKDLVRITLIQSGDHILN---SFDERISSFAEKKFQRDG 259 (547)
Q Consensus 186 ~~~~~~~vvVVGgG~~gvE~A~~l~~~~---~~~~~~~~~~~~~~~~V~lv~~~~~il~---~~~~~~~~~~~~~l~~~G 259 (547)
...++|+|++ +|+|++....++. ...+.+. ..+.+++|++++..+.+.+ ...+...+.+.+.|+++|
T Consensus 142 ----~~~~vv~gg~-~gve~~~~~~e~a~~~~~~l~~~--g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~G 214 (430)
T 3hyw_A 142 ----NPGPVVIGAI-PGVSCFGPAYEFALMLHYELKKR--GIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERN 214 (430)
T ss_dssp ----SCCCEEEEEC-TTCCCCHHHHHHHHHHHHHHHHT--TCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTT
T ss_pred ----CCceEEEeCC-CcEEEhHHHHHHHHHHHHHHHHh--cccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCC
Confidence 2245555554 4555444333321 1112221 1234678999998886543 456778889999999999
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALG 339 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiG 339 (547)
|++++++.|++++++++.+.+. +|+..++++|+++|++|+++++.+......+..+.+|+|.||++||++++|||||+|
T Consensus 215 V~~~~~~~v~~v~~~~~~~~~~-~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiG 293 (430)
T 3hyw_A 215 IDWIANVAVKAIEPDKVIYEDL-NGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVG 293 (430)
T ss_dssp CEEECSCEEEEECSSEEEEECT-TSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECS
T ss_pred eEEEeCceEEEEeCCceEEEee-CCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEec
Confidence 9999999999999999988863 355556999999999998766533221111111345689999999987999999999
Q ss_pred ccCccCcccchhhhhHhhhhcccCCCCCcchhhhhhhhhhhhhcchhhHHhhhcccccccccccCCCCCCCCcccchhhh
Q 041537 340 DCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQGNPRREVDIEGF 419 (547)
Q Consensus 340 D~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (547)
||+.++....
T Consensus 294 D~a~~p~~~~---------------------------------------------------------------------- 303 (430)
T 3hyw_A 294 VVTAIPPIEK---------------------------------------------------------------------- 303 (430)
T ss_dssp TTBCCCCSSC----------------------------------------------------------------------
T ss_pred cEEecCCccc----------------------------------------------------------------------
Confidence 9999763210
Q ss_pred hhhhccccccCCCCCchhHHHHHHHHHHHHHHhhhhccCCCCCCCccccCCCCCCCCCCeeccccceEEccCcceeeecC
Q 041537 420 TLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQFAPLGGEQAAAELP 499 (547)
Q Consensus 420 ~~~l~~~~~~~~~~p~~aq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~G~~~~lG~~~av~~~~ 499 (547)
...+...|++||.|.|||+++|+||.+.++++ +.++|.+.+.+.++++|.+.+++...
T Consensus 304 -------~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~---------------~~~~~~~~~~~~~~~~G~~~~~~~~~ 361 (430)
T 3hyw_A 304 -------TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN---------------PDKYAPRLSAICIADFGEDAGFFFAD 361 (430)
T ss_dssp -------CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC---------------CCCEEECCCEEEEEECSSSEEEEEEE
T ss_pred -------CcCcCccchHHHHHHHHHHHHHHHHHHHhcCC---------------CCCcccCCcEEEEEEcCCCcEEEEEc
Confidence 00013479999999999999999998877653 44566667788999999999986421
Q ss_pred ----Cc---cc---------chhHHHHHHHHHHHHHhccchhHHHHHHHHHHHhhhcCcCCC
Q 041537 500 ----GD---WV---------SMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSS 545 (547)
Q Consensus 500 ----~~---~~---------~~g~~a~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 545 (547)
.. +. -.++..|++|+..|...++.|+++++++++|+....+.|+++
T Consensus 362 ~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 362 PVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp SSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred ccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 10 11 136667899999999999999999999999999999999875
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.4e-44 Score=380.21 Aligned_cols=374 Identities=20% Similarity=0.275 Sum_probs=293.3
Q ss_pred CCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEA 104 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 104 (547)
+++|||||||+||+++|..|++ .+++|||||+++++.|.|.++.+..+.....++..++.+++++.+ ++++.++|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g--v~~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG--IHFIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT--CEEECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC--CEEEEeEE
Confidence 5799999999999999999997 899999999999999999999999998888888899999998887 77788999
Q ss_pred EEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccc---cccccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 105 IKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLE---NCHFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 105 ~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e---~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
+.+|++++.|.+.+ +. ++.||+||+|||++++.+.+||+.+ +.+.+++.+++.++++.+...+.
T Consensus 82 ~~id~~~~~V~~~~----g~---~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------ 148 (437)
T 3sx6_A 82 EQIDAEAQNITLAD----GN---TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLR------ 148 (437)
T ss_dssp EEEETTTTEEEETT----SC---EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHH------
T ss_pred EEEEcCCCEEEECC----CC---EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHh------
Confidence 99999999998876 43 7999999999999999999999874 66778999999999887654321
Q ss_pred CCHHHHhccccEEEEcCChhH------HHHHHHHHHHHHHhhhhhCCCCCCCce-EEEEecCCcc----CCcccHHHHHH
Q 041537 182 LSEEERKRNLHFVIVGGGPTG------VEFAAELHDYIQEDLINLYPTVKDLVR-ITLIQSGDHI----LNSFDERISSF 250 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~g------vE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~i----l~~~~~~~~~~ 250 (547)
..+++|||+|+++ +|+|..++..+++. ..+...+ |+++++.+.+ ++.++ ...+.
T Consensus 149 --------~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~ 213 (437)
T 3sx6_A 149 --------EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGI 213 (437)
T ss_dssp --------SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-THHHH
T ss_pred --------CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HHHHH
Confidence 2267889987654 99999988776531 1111234 9999999987 34444 47888
Q ss_pred HHHHHHhCCcEEEcCceEEEEeCCeEEEEec-cCCe---EEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCccEEeCC
Q 041537 251 AEKKFQRDGIEVLTECRVVNVSDKEITMKIK-STGA---VCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLATNE 325 (547)
Q Consensus 251 ~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~---~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~ 325 (547)
+.+.|+++||+++++++|++++++++++.+. .+|+ ..++++|+++|++|+.+.+. +....++ +.+|+|.||+
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~---~~~~~gl~~~~G~i~Vd~ 290 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPA---VAGVEGLCNPGGFVLVDE 290 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHH---HHTSTTTBCTTSCBCBCT
T ss_pred HHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchh---hhccccccCCCCcEEeCh
Confidence 9999999999999999999999999887752 2332 34599999999999765542 2222355 6789999999
Q ss_pred CCCcCCCCCEEEeCccCccCcccchhhhhHhhhhcccCCCCCcchhhhhhhhhhhhhcchhhHHhhhcccccccccccCC
Q 041537 326 WLRVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKD 405 (547)
Q Consensus 326 ~l~~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (547)
+||++++|||||+|||+..+... +
T Consensus 291 ~l~t~~~~~Ifa~GD~~~~~~~~-----------------~--------------------------------------- 314 (437)
T 3sx6_A 291 HQRSKKYANIFAAGIAIAIPPVE-----------------T--------------------------------------- 314 (437)
T ss_dssp TSBBSSCTTEEECGGGBCCCCSC-----------------C---------------------------------------
T ss_pred hccCCCCCCEEEEEEEeccCCcC-----------------C---------------------------------------
Confidence 99999999999999999875310 0
Q ss_pred CCCCCCcccchhhhhhhhccccccCCCCCchhHHHHHHHHHHHHHHhhhhccCCCCCCCccccCCCCCCCCCCeeccccc
Q 041537 406 PQGNPRREVDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQ 485 (547)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~aq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~G~ 485 (547)
...+.+.|++++.|.+||+++|+||.+.+.++ ++.+|.+.....
T Consensus 315 ---------------------~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~---------------~~~~~~~~~~~~ 358 (437)
T 3sx6_A 315 ---------------------TPVPTGAPKTGYMIESMVSAAVHNIKADLEGR---------------KGEQTMGTWNAV 358 (437)
T ss_dssp ---------------------CSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS---------------CCCCCCCSCCEE
T ss_pred ---------------------CcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC---------------CCCCcccCcceE
Confidence 00002368999999999999999999887653 456666665554
Q ss_pred e-EEccCcceeeec-------CCcccchhHHHHHHHHHHHHHhccchhH
Q 041537 486 F-APLGGEQAAAEL-------PGDWVSMGHSTQWLWYSVYASKQVSWRT 526 (547)
Q Consensus 486 ~-~~lG~~~av~~~-------~~~~~~~g~~a~~~w~~~~~~~~~~~~~ 526 (547)
+ +.+|.+.++.-. ...+...|.++|++...++...+..++.
T Consensus 359 ~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~~~~~~ 407 (437)
T 3sx6_A 359 AFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKMKM 407 (437)
T ss_dssp EEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHHHHHhcc
Confidence 4 458887776411 1224567999999888887777655543
No 4
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=9.2e-43 Score=364.03 Aligned_cols=349 Identities=17% Similarity=0.173 Sum_probs=269.3
Q ss_pred CCeEEEECCchHHHHHHHhcCC--CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV--SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~--~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
.|||||||||+||+++|.+|++ .+.+|||||+++++.++|+++.+..|..+.+++..+++.+.+ .+ ++|++++|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~-~g--v~~i~~~v~ 78 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRA-HG--IQVVHDSAL 78 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHH-TT--CEEECSCEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHH-CC--CEEEEeEEE
Confidence 4799999999999999999974 457999999999999999999999999999988888887765 45 889999999
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcccc-----ccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLEN-----CHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~-----~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
.||++++.|.+.+ |. ++.||+||||||++++.+++||+.+. .+.+++.+++..+++.+...
T Consensus 79 ~id~~~~~v~~~~----g~---~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~------- 144 (401)
T 3vrd_B 79 GIDPDKKLVKTAG----GA---EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM------- 144 (401)
T ss_dssp EEETTTTEEEETT----SC---EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS-------
T ss_pred EEEccCcEEEecc----cc---eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc-------
Confidence 9999999999876 54 89999999999999999999998653 35678899999988887542
Q ss_pred CCCHHHHhccccEEEEcC-------ChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--CcccHHHHHHH
Q 041537 181 GLSEEERKRNLHFVIVGG-------GPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--NSFDERISSFA 251 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGg-------G~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--~~~~~~~~~~~ 251 (547)
..+ ..+|+++ +..+.|++.+++++++.. ..+.+|++++..+.+. +.+++.+.+.+
T Consensus 145 -------~~~-~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~--------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~ 208 (401)
T 3vrd_B 145 -------DDG-GVVIIAPPAPPFRCPPGPYERASQIAHYLKAH--------KSKSKVIILDNSQTFSKQAQFTKGWERLY 208 (401)
T ss_dssp -------CTT-CEEEEECCSSSCBCTTHHHHHHHHHHHHHHHH--------CTTCEEEEECSSSSCTTHHHHHHHHHHHS
T ss_pred -------ccC-CcEEEecCCccEEeehHHHHHHHHHHHHHHhc--------CCCCEEEEEcccccccccccccHHHHHHH
Confidence 112 3344433 445678888887765421 1257999999998874 45778888888
Q ss_pred HHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCccEEeCCC-C
Q 041537 252 EKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLATNEW-L 327 (547)
Q Consensus 252 ~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~-l 327 (547)
.+.+++.||++++++++..++. +...+.. .+|++ +++|+++|++|.+++ .++.+.++ +++|+|.||++ |
T Consensus 209 ~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~-~~g~~--i~~D~vi~~~g~~~~----~~~~~~gl~~~~G~i~VD~~tl 281 (401)
T 3vrd_B 209 GFGTENALIEWHPGPDAAVVKTDTEAMTVET-SFGET--FKAAVINLIPPQRAG----KIAQSASLTNDSGWCPVDIRTF 281 (401)
T ss_dssp CTTSTTCSEEEECTTTTCEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEEC----HHHHHTTCCCTTSSBCBCTTTC
T ss_pred HHHHHhcCcEEEeCceEEEEEecccceEEEc-CCCcE--EEeeEEEEecCcCCc----hhHhhccccccCCCEEECCCcc
Confidence 8888999999999998887753 3333332 34775 999999999996544 35566777 78899999986 8
Q ss_pred CcCCCCCEEEeCccCccCcccchhhhhHhhhhcccCCCCCcchhhhhhhhhhhhhcchhhHHhhhcccccccccccCCCC
Q 041537 328 RVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQ 407 (547)
Q Consensus 328 ~~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (547)
|++++|||||+|||+..
T Consensus 282 ~~t~~p~VfAiGDva~~--------------------------------------------------------------- 298 (401)
T 3vrd_B 282 ESSLQPGIHVIGDACNA--------------------------------------------------------------- 298 (401)
T ss_dssp BBSSSTTEEECGGGBCC---------------------------------------------------------------
T ss_pred eecCCCCEEEecccccC---------------------------------------------------------------
Confidence 88899999999999863
Q ss_pred CCCCcccchhhhhhhhccccccCCCCCchhHHHHHHHHHHHHHHhhhhccCCCCCCCccccCCCCCCCCCCeeccccce-
Q 041537 408 GNPRREVDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQF- 486 (547)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~aq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~G~~- 486 (547)
.|.|++|+.|.+||+++|+||.+.++++ ++.||.|.....+
T Consensus 299 -----------------------~~~pk~a~~A~~qa~v~A~ni~~~l~G~---------------~~~~~~y~~~~~~~ 340 (401)
T 3vrd_B 299 -----------------------APMPKSAYSANSQAKVAAAAVVALLKGE---------------EPGTPSYLNTCYSI 340 (401)
T ss_dssp -----------------------TTSCBSHHHHHHHHHHHHHHHHHHHHTC---------------CCCCCCEEEEEEEE
T ss_pred -----------------------CCCCchHHHHHHHHHHHHHHHHHHhcCC---------------CCCCcccCCeEEEE
Confidence 3478999999999999999999887663 4567777665433
Q ss_pred EEccCcceee-------------ecC--CcccchhHHHHHHHHHHH
Q 041537 487 APLGGEQAAA-------------ELP--GDWVSMGHSTQWLWYSVY 517 (547)
Q Consensus 487 ~~lG~~~av~-------------~~~--~~~~~~g~~a~~~w~~~~ 517 (547)
+..|....+. ..+ +.....+..+|++|+.+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (401)
T 3vrd_B 341 LAPGYGISIAAVYRPNAEGKAIEAVPDSGGITPVDAPDWVLEREVQ 386 (401)
T ss_dssp EETTEEEEEEEEEEECTTSSSEEECTTCCEESCTTCCHHHHHHHHH
T ss_pred EecCCceEEEEEecccCCCceEEEecccCCcccccchhHHHhccch
Confidence 2333222221 111 112334777899997654
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2.8e-42 Score=363.62 Aligned_cols=384 Identities=19% Similarity=0.259 Sum_probs=293.0
Q ss_pred CCeEEEECCchHHHHHHHhcCC--CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV--SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~--~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
+++|||||||+||+++|..|++ .|++|||||+++++.|.|.++.+..+..+..++...+..++++.+ ++++.++++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g--v~~~~~~v~ 79 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC--CEEEEEEEE
Confidence 4799999999999999999997 899999999999999999999998888888888888888888877 888889999
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHH
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEE 185 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 185 (547)
.++++.+.|.+.+ +. ++.||+||+|||+.++.+++.. ..+...+.+.+++.++++.+...+
T Consensus 80 ~id~~~~~v~~~~----g~---~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~----------- 140 (430)
T 3h28_A 80 SIDPDANTVTTQS----GK---KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELY----------- 140 (430)
T ss_dssp EEETTTTEEEETT----CC---EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHH-----------
T ss_pred EEECCCCEEEECC----Cc---EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHH-----------
Confidence 9999999998875 43 7999999999999987653321 245667889999999887765432
Q ss_pred HHhccccEEEEcCChhH------HHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc----CCcccHHHHHHHHHHH
Q 041537 186 ERKRNLHFVIVGGGPTG------VEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI----LNSFDERISSFAEKKF 255 (547)
Q Consensus 186 ~~~~~~~vvVVGgG~~g------vE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i----l~~~~~~~~~~~~~~l 255 (547)
...+++|||+|+++ +|+|..++..+++. .++...+|+++++.+.+ ++.++ ...+.+.+.|
T Consensus 141 ---~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~------g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~~~l 210 (430)
T 3h28_A 141 ---ANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR------GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVEDLF 210 (430)
T ss_dssp ---HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHHHHH
T ss_pred ---hcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCccceEEEEecCCccccccccCcch-HHHHHHHHHH
Confidence 12357888988765 99999888765431 11234789999999887 33333 5788899999
Q ss_pred HhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCc-cEEeCCCCCcCCCC
Q 041537 256 QRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRR-VLATNEWLRVKECE 333 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g-~i~Vd~~l~~~~~~ 333 (547)
+++||++++++.|++++++++++.+.. ++..++++|.++|++|..+.+.+..+. .++ +.+| +|.||+++|++++|
T Consensus 211 ~~~GV~i~~~~~v~~v~~~~v~~~~~~-~~g~~i~~D~vv~a~G~~~~~~l~~~~--~gl~~~~G~~i~Vd~~l~t~~~~ 287 (430)
T 3h28_A 211 AERNIDWIANVAVKAIEPDKVIYEDLN-GNTHEVPAKFTMFMPSFQGPEVVASAG--DKVANPANKMVIVNRCFQNPTYK 287 (430)
T ss_dssp HHTTCEEECSCEEEEECSSEEEEECTT-SCEEEEECSEEEEECEEECCHHHHTTC--TTTBCTTTCCBCCCTTSBCSSST
T ss_pred HHCCCEEEeCCEEEEEeCCeEEEEecC-CCceEEeeeEEEECCCCccchhHhhcc--ccCcCCCCCEEecCccccCCCCC
Confidence 999999999999999999988887532 333459999999999976554322110 355 6788 99999999999999
Q ss_pred CEEEeCccCccCcccchhhhhHhhhhcccCCCCCcchhhhhhhhhhhhhcchhhHHhhhcccccccccccCCCCCCCCcc
Q 041537 334 NVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQGNPRRE 413 (547)
Q Consensus 334 ~VfaiGD~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (547)
||||+|||+..+... +
T Consensus 288 ~Ifa~GD~~~~~~~~-----------------~----------------------------------------------- 303 (430)
T 3h28_A 288 NIFGVGVVTAIPPIE-----------------K----------------------------------------------- 303 (430)
T ss_dssp TEEECSTTBCCCCSS-----------------C-----------------------------------------------
T ss_pred CEEEEEeeeccCCcc-----------------C-----------------------------------------------
Confidence 999999999865210 0
Q ss_pred cchhhhhhhhccccccCCCCCchhHHHHHHHHHHHHHHhhhhccCCCCCCCccccCCCCCCCCCCeeccccceE-EccCc
Q 041537 414 VDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQFA-PLGGE 492 (547)
Q Consensus 414 ~~~~~~~~~l~~~~~~~~~~p~~aq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~G~~~-~lG~~ 492 (547)
..-+.+.|++++.|.+||+++|+||.+.+.++ ++ ++++.....++ .+|.+
T Consensus 304 -------------~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~---------------~~-~~~~~~~~~~~~~~G~~ 354 (430)
T 3h28_A 304 -------------TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN---------------PD-KYAPRLSAICIADFGED 354 (430)
T ss_dssp -------------CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC---------------CC-CEEECCCEEEEEECSSS
T ss_pred -------------CCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC---------------CC-CCcCCcceEEEEEeCCC
Confidence 00002368999999999999999999887653 22 35565555544 58887
Q ss_pred ceeee-------cCCcccchhHHHHHHHHHHHHHhccchhHHHHHHH--HHHHhh
Q 041537 493 QAAAE-------LPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVS--DWTRRF 538 (547)
Q Consensus 493 ~av~~-------~~~~~~~~g~~a~~~w~~~~~~~~~~~~~~~~~~~--~w~~~~ 538 (547)
.++.- -...+...|.++|++...++...+..+|.-....+ .|++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~~~~p~~~~~~~~~ 409 (430)
T 3h28_A 355 AGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEI 409 (430)
T ss_dssp EEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred ceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHHHhccCCcCchhHHHHHHh
Confidence 77641 11224567999999999999888877776644443 344454
No 6
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.5e-42 Score=362.23 Aligned_cols=275 Identities=22% Similarity=0.340 Sum_probs=226.6
Q ss_pred CeEEEECCchHHHHHHHhcCCCC--CeEEEEcCCCCCccC-CChhhhhccccCccc--cchhHHHHHHhCCCcEEEEEEE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSS--YDVQVVSPQNYFAFT-PLLPSVTCGTVEARS--IAEPVRNIIKKRNAEIQFWEAE 103 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g--~~Vtlid~~~~~~~~-p~l~~~~~g~~~~~~--~~~~~~~~~~~~~~~v~~~~~~ 103 (547)
+||||||||+||++||..|++.| .+|+|||+++++.|. +.++.+..+...... +......++++.++++. ...+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~ 79 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVK-TYHE 79 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEE-ETEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEE-eCCe
Confidence 57999999999999999998655 679999999987774 566666555443332 33344567777774442 4578
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLS 183 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 183 (547)
|+.||++.+.+.+.... .....++.||+||||||++|+.|++|| ++.+.+++++++..++..+..
T Consensus 80 V~~id~~~~~~~~~~~~--~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~----------- 144 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRK--TNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA----------- 144 (437)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH-----------
T ss_pred EEEEEccCcEEEEEecc--CCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc-----------
Confidence 99999999998876543 222357999999999999999999988 567788999999998876543
Q ss_pred HHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEE
Q 041537 184 EEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVL 263 (547)
Q Consensus 184 ~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~ 263 (547)
...++++|||||++|+|+|..+.++ +.+|+++++.+++++.+++++.+.+.+.|+++||+++
T Consensus 145 ----~~~~~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~ 206 (437)
T 4eqs_A 145 ----NQVDKVLVVGAGYVSLEVLENLYER--------------GLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYR 206 (437)
T ss_dssp ----HTCCEEEEECCSHHHHHHHHHHHHH--------------TCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEE
T ss_pred ----cCCcEEEEECCccchhhhHHHHHhc--------------CCcceeeeeeccccccccchhHHHHHHHhhccceEEE
Confidence 3456999999999999999999987 6899999999999999999999999999999999999
Q ss_pred cCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCCEEEeCcc
Q 041537 264 TECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECENVYALGDC 341 (547)
Q Consensus 264 ~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~ 341 (547)
++++|++++++.+++.+ |+. +++|.|+||+|. .|++ .+++..++ +.+|+|.||+++|| +.|||||+|||
T Consensus 207 ~~~~v~~~~~~~v~~~~---g~~--~~~D~vl~a~G~--~Pn~-~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~GDv 277 (437)
T 4eqs_A 207 LNEEINAINGNEITFKS---GKV--EHYDMIIEGVGT--HPNS-KFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDI 277 (437)
T ss_dssp ESCCEEEEETTEEEETT---SCE--EECSEEEECCCE--EESC-GGGTTSSCCCCTTSCEECCTTCBC-SSTTEEECGGG
T ss_pred eccEEEEecCCeeeecC---CeE--EeeeeEEEEece--ecCc-HHHHhhhhhhccCCcEecCCCccC-CCCCEEEEEEc
Confidence 99999999999888764 776 999999999994 5655 35556665 67889999999999 99999999999
Q ss_pred CccCc
Q 041537 342 ATIDQ 346 (547)
Q Consensus 342 a~~~~ 346 (547)
+..+.
T Consensus 278 a~~~~ 282 (437)
T 4eqs_A 278 ATSHY 282 (437)
T ss_dssp EEEEB
T ss_pred cCccc
Confidence 98653
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.3e-42 Score=357.05 Aligned_cols=261 Identities=25% Similarity=0.373 Sum_probs=225.9
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc-CCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEE
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF-TPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAE 103 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~-~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~ 103 (547)
.+++||||||||+||++||..|...+.+|+|||+++++.| .|.++.+..+..+.+++.....+++++.+ ++++ ..+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~--i~~~~~~~ 84 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNN--IKVITSEF 84 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTT--CEEECSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCC--CEEEeCCE
Confidence 4568999999999999999999888999999999998876 67888888888888888888888888888 5555 458
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLS 183 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 183 (547)
|+.||++++.|++.+ |. ++.||+||||||++|+.|++||.+ +++.+++.+++.++++.+..
T Consensus 85 V~~id~~~~~v~~~~----g~---~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~~----------- 145 (385)
T 3klj_A 85 ATSIDPNNKLVTLKS----GE---KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECKN----------- 145 (385)
T ss_dssp EEEEETTTTEEEETT----SC---EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHHH-----------
T ss_pred EEEEECCCCEEEECC----CC---EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhhc-----------
Confidence 999999999999876 54 899999999999999999999987 88889999999998877632
Q ss_pred HHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCCcEE
Q 041537 184 EEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDGIEV 262 (547)
Q Consensus 184 ~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~GV~v 262 (547)
.++++|||+|++|+|+|..|.+. +.+|+++++.+++++. +++.+.+.+.+.+++.||++
T Consensus 146 ------~~~vvVIGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~ 205 (385)
T 3klj_A 146 ------KGKAFIIGGGILGIELAQAIIDS--------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKI 205 (385)
T ss_dssp ------HSCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEE
T ss_pred ------CCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEE
Confidence 35999999999999999999987 6899999999999986 89999999999999999999
Q ss_pred EcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccC
Q 041537 263 LTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCA 342 (547)
Q Consensus 263 ~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a 342 (547)
++++.|+++ |+. ++||.||+|+|+. |+. .+++.+++..+++|.||+++|| +.|+|||+|||+
T Consensus 206 ~~~~~v~~i------------g~~--~~~D~vv~a~G~~--p~~-~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~GD~a 267 (385)
T 3klj_A 206 YTNSNFEEM------------GDL--IRSSCVITAVGVK--PNL-DFIKDTEIASKRGILVNDHMET-SIKDIYACGDVA 267 (385)
T ss_dssp ECSCCGGGC------------HHH--HHHSEEEECCCEE--ECC-GGGTTSCCCBSSSEEECTTCBC-SSTTEEECGGGE
T ss_pred EeCCEEEEc------------CeE--EecCeEEECcCcc--cCh-hhhhhcCCCcCCCEEECCCccc-CCCCEEEEEeeE
Confidence 999988766 333 9999999999964 444 4556667743445999999999 899999999999
Q ss_pred ccC
Q 041537 343 TID 345 (547)
Q Consensus 343 ~~~ 345 (547)
..+
T Consensus 268 ~~~ 270 (385)
T 3klj_A 268 EFY 270 (385)
T ss_dssp EET
T ss_pred ecC
Confidence 753
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-41 Score=348.80 Aligned_cols=263 Identities=24% Similarity=0.438 Sum_probs=223.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc-CCChhhhhccccCccccchhHHHHHHhCCCcEEEEEE-EEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF-TPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEA-EAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~-~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~ 105 (547)
..+|||||||+||++||..|++.| +|+|||++++..| .++++.+..+..+.+++..+..+++++.+ ++++.+ +|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRG--IEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHT--EEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCC--cEEEECCEEE
Confidence 469999999999999999999999 9999999988665 47777777777777777777777888777 777776 699
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHH
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEE 185 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 185 (547)
.+|++.+.|. .+ +. ++.||+||||||++|+.|++|| .++++.+++.+++.++++.+.
T Consensus 85 ~id~~~~~V~-~~----g~---~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~-------------- 141 (367)
T 1xhc_A 85 LIDRGRKVVI-TE----KG---EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE-------------- 141 (367)
T ss_dssp EEETTTTEEE-ES----SC---EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH--------------
T ss_pred EEECCCCEEE-EC----Cc---EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh--------------
Confidence 9999988887 44 44 8999999999999999999999 567788889999988877652
Q ss_pred HHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcC
Q 041537 186 ERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTE 265 (547)
Q Consensus 186 ~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~ 265 (547)
..++++|||||++|+|+|..|.++ +.+|+++++.+++++ +++++.+.+.+.|++.||+++++
T Consensus 142 ---~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~ 203 (367)
T 1xhc_A 142 ---NSGEAIIIGGGFIGLELAGNLAEA--------------GYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLN 203 (367)
T ss_dssp ---HHSEEEEEECSHHHHHHHHHHHHT--------------TCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECS
T ss_pred ---cCCcEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcC
Confidence 225999999999999999999876 689999999999999 99999999999999999999999
Q ss_pred ceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 266 CRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 266 ~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
++|++++.+.+++. +|+ +++|.||||+|. .|+.+ +++.+++..+++|.||+++|| +.|+|||+|||+..
T Consensus 204 ~~v~~i~~~~v~~~---~g~---i~~D~vi~a~G~--~p~~~-ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a~~ 272 (367)
T 1xhc_A 204 SELLEANEEGVLTN---SGF---IEGKVKICAIGI--VPNVD-LARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCAEY 272 (367)
T ss_dssp CCEEEECSSEEEET---TEE---EECSCEEEECCE--EECCH-HHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGEEB
T ss_pred CEEEEEEeeEEEEC---CCE---EEcCEEEECcCC--CcCHH-HHHhCCCCCCCCEEECCCccc-CCCCEEEeEeeeec
Confidence 99999987776653 354 999999999995 55553 667777743345999999999 89999999999874
No 9
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.5e-40 Score=345.47 Aligned_cols=280 Identities=23% Similarity=0.358 Sum_probs=236.1
Q ss_pred CCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEA 104 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 104 (547)
|++|||||||++|+++|..|++ .|++|+|||+++++.+.|.++....+..+..++...+.+.+++.+ ++++.++|
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~v 78 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG--IQFQEGTV 78 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT--CEEEECEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC--eEEEEeeE
Confidence 4689999999999999999998 899999999999999999888888888888899999999998887 67788899
Q ss_pred EEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCH
Q 041537 105 IKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSE 184 (547)
Q Consensus 105 ~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 184 (547)
+.++++.+.|.+.+.. .+..++.||+||+|+|+.++.+.+||++++...+.+.+++.++++.+...
T Consensus 79 ~~i~~~~~~V~~~~g~---~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~----------- 144 (409)
T 3h8l_A 79 EKIDAKSSMVYYTKPD---GSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF----------- 144 (409)
T ss_dssp EEEETTTTEEEEECTT---SCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC-----------
T ss_pred EEEeCCCCEEEEccCC---cccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh-----------
Confidence 9999999999987631 12346999999999999999999999988777888999999988876431
Q ss_pred HHHhccccEEEEcCC-------------------h------hHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 185 EERKRNLHFVIVGGG-------------------P------TGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 185 ~~~~~~~~vvVVGgG-------------------~------~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
..+++|||+| . .++|+|..+.+.+++. ..++..+|+++++.+ +
T Consensus 145 -----~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~------g~~~~~~v~~~~~~~-~ 212 (409)
T 3h8l_A 145 -----QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKK------GMLDKVHVTVFSPGE-Y 212 (409)
T ss_dssp -----CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTT------TCTTTEEEEEECSSS-S
T ss_pred -----cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHc------CCCCCeEEEEEeCCc-c
Confidence 1367799999 1 4889999888776421 122346999999999 8
Q ss_pred CCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHh--CC-C
Q 041537 240 LNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI--GQ-G 316 (547)
Q Consensus 240 l~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~--~~-~ 316 (547)
++.+++.+.+.+.+.+++.||+++++++|++++++++++.+ |++ +++|+||+++|..+++ ++.++ ++ +
T Consensus 213 l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~---g~~--~~~D~vi~a~G~~~~~----~l~~~~~~l~~ 283 (409)
T 3h8l_A 213 LSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEK---GNT--IPADITILLPPYTGNP----ALKNSTPDLVD 283 (409)
T ss_dssp STTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETT---SCE--EECSEEEEECCEECCH----HHHTSCGGGSC
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECC---CCE--EeeeEEEECCCCCccH----HHHhccccCcC
Confidence 88899999999999999999999999999999998877654 765 9999999999976654 33444 44 6
Q ss_pred CCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 317 KRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 317 ~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
.+|+|.||+++|++++|||||+|||+..
T Consensus 284 ~~G~i~vd~~~~~~~~~~vfa~GD~~~~ 311 (409)
T 3h8l_A 284 DGGFIPTDLNMVSIKYDNVYAVGDANSM 311 (409)
T ss_dssp TTSCBCBBTTSBBSSCTTEEECGGGBTT
T ss_pred CCCCEEeCcccccCCCCCEEEeehhccC
Confidence 7789999999999899999999999874
No 10
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=5.7e-40 Score=343.76 Aligned_cols=271 Identities=22% Similarity=0.357 Sum_probs=224.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCe--EEEEcCCCCCccC--CChhhhhccccCccccchhHHHHHHhCCCcEEEEEE-
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYD--VQVVSPQNYFAFT--PLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEA- 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~--Vtlid~~~~~~~~--p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~- 102 (547)
+++|||||||+||++||..|++.|++ |+|||+++++.|. ++...+..+...+..+ ....+++.+.+ ++++.+
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~--i~~~~~~ 78 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEAR--IDMLTGP 78 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTT--CEEEESC
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCC--CEEEeCC
Confidence 46999999999999999999988877 9999999998774 4555677777777766 55566677777 667776
Q ss_pred EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 103 EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
+|+.+|+..+.|.+.+ +. ++.||+||||||+.|+.|++||.+ ++++.+++.+++..+++.+
T Consensus 79 ~v~~id~~~~~v~~~~----g~---~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~----------- 140 (410)
T 3ef6_A 79 EVTALDVQTRTISLDD----GT---TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW----------- 140 (410)
T ss_dssp CEEEEETTTTEEEETT----SC---EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC-----------
T ss_pred EEEEEECCCCEEEECC----CC---EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh-----------
Confidence 9999999999999876 44 899999999999999999999976 6778889999988877643
Q ss_pred CCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCCc
Q 041537 182 LSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDGI 260 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~GV 260 (547)
...++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.+++.||
T Consensus 141 ------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV 200 (410)
T 3ef6_A 141 ------TSATRLLIVGGGLIGCEVATTARKL--------------GLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGV 200 (410)
T ss_dssp ------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTC
T ss_pred ------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCC
Confidence 2356999999999999999999875 6899999999999874 889999999999999999
Q ss_pred EEEcCceEEEEeCCe-EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeC
Q 041537 261 EVLTECRVVNVSDKE-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALG 339 (547)
Q Consensus 261 ~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiG 339 (547)
++++++.|++++.++ +....+.+|+. ++||.||+|+|+ .|+. .+++.+++..+++|.||+++++ +.|+|||+|
T Consensus 201 ~i~~~~~v~~i~~~~~~~~v~~~dg~~--i~aD~Vv~a~G~--~p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~IyA~G 274 (410)
T 3ef6_A 201 QVELGTGVVGFSGEGQLEQVMASDGRS--FVADSALICVGA--EPAD-QLARQAGLACDRGVIVDHCGAT-LAKGVFAVG 274 (410)
T ss_dssp EEECSCCEEEEECSSSCCEEEETTSCE--EECSEEEECSCE--EECC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEECG
T ss_pred EEEeCCEEEEEeccCcEEEEEECCCCE--EEcCEEEEeeCC--eecH-HHHHhCCCccCCeEEEccCeeE-CCCCEEEEE
Confidence 999999999998752 21111234765 999999999996 4444 4667778743355999999999 999999999
Q ss_pred ccCccC
Q 041537 340 DCATID 345 (547)
Q Consensus 340 D~a~~~ 345 (547)
||+..+
T Consensus 275 D~a~~~ 280 (410)
T 3ef6_A 275 DVASWP 280 (410)
T ss_dssp GGEEEE
T ss_pred cceecc
Confidence 999864
No 11
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.5e-39 Score=337.66 Aligned_cols=275 Identities=23% Similarity=0.383 Sum_probs=229.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCe--EEEEcCCCCCccC--CChhhhhccccCccccchhHHHHHHhCCCcEEEEE
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYD--VQVVSPQNYFAFT--PLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE 101 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~--Vtlid~~~~~~~~--p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~ 101 (547)
+++++|||||||+||++||..|++.|++ |+|||+++++.|. ++...+..+.....++......++...+ ++++.
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~ 84 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKA--VEMKL 84 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTT--EEEEE
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCC--cEEEe
Confidence 3468999999999999999999988887 9999999988774 4555666776667777777778888887 77777
Q ss_pred E-EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccC
Q 041537 102 A-EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVL 179 (547)
Q Consensus 102 ~-~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~ 179 (547)
+ +|+.+|+..+.|.+.+ +. .+.||+||+|||+.|+.|++||.+ ++++.+++.+++..++..+..
T Consensus 85 ~~~v~~id~~~~~v~~~~----g~---~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~------- 150 (415)
T 3lxd_A 85 GAEVVSLDPAAHTVKLGD----GS---AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA------- 150 (415)
T ss_dssp TCCEEEEETTTTEEEETT----SC---EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHT-------
T ss_pred CCEEEEEECCCCEEEECC----CC---EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhh-------
Confidence 6 8999999999999876 44 899999999999999999999976 677888999999888776421
Q ss_pred CCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhC
Q 041537 180 PGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRD 258 (547)
Q Consensus 180 ~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~ 258 (547)
..++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 151 ---------~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~ 207 (415)
T 3lxd_A 151 ---------GAKNAVVIGGGYIGLEAAAVLTKF--------------GVNVTLLEALPRVLARVAGEALSEFYQAEHRAH 207 (415)
T ss_dssp ---------TCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred ---------cCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEecCCchhhhhcCHHHHHHHHHHHHhC
Confidence 156999999999999999999875 6899999999999984 8999999999999999
Q ss_pred CcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEE
Q 041537 259 GIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVY 336 (547)
Q Consensus 259 GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~Vf 336 (547)
||++++++.|++++.+ .+....+.+|+. ++||.||+|+|+. |+. .+++.+++..+++|.||+++|| +.|+||
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~--i~aD~Vv~a~G~~--p~~-~l~~~~gl~~~~gi~vd~~~~t-~~~~iy 281 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSV--IPADIVIVGIGIV--PCV-GALISAGASGGNGVDVDEFCRT-SLTDVY 281 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCE--EECSEEEECSCCE--ESC-HHHHHTTCCCSSSEECCTTCBC-SSTTEE
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECCCCc--cCh-HHHHhCCCCcCCCEEECCCCCc-CCCCEE
Confidence 9999999999999753 443333345765 9999999999964 444 4667778743345999999999 899999
Q ss_pred EeCccCccC
Q 041537 337 ALGDCATID 345 (547)
Q Consensus 337 aiGD~a~~~ 345 (547)
|+|||+..+
T Consensus 282 A~GD~a~~~ 290 (415)
T 3lxd_A 282 AIGDCAAHA 290 (415)
T ss_dssp ECGGGEEEE
T ss_pred EEEeeeeec
Confidence 999999864
No 12
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.6e-39 Score=334.69 Aligned_cols=272 Identities=21% Similarity=0.402 Sum_probs=228.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCCCCccC--CChhhhhccccCccccchhHHHHHHhCCCcEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQNYFAFT--PLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAE 103 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~~~~~~--p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 103 (547)
+++|||||||+||+++|..|++.|+ +|+|||+++++.|. ++...+..+...+.++......++...+ ++++.++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~--i~~~~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQA--IELISDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTT--EEEECCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCC--CEEEEEE
Confidence 3689999999999999999998888 89999999987773 4555677777777777777778888887 6776799
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGL 182 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 182 (547)
|+.+|++.+.|.+.+ +. ++.||+||+|||+.|+.|++||.+ ++++.+++.+++..++..+
T Consensus 79 v~~id~~~~~v~~~~----g~---~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------------ 139 (404)
T 3fg2_P 79 MVSIDREGRKLLLAS----GT---AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------------ 139 (404)
T ss_dssp EEEEETTTTEEEESS----SC---EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG------------
T ss_pred EEEEECCCCEEEECC----CC---EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh------------
Confidence 999999999999876 44 899999999999999999999976 5678888999988877654
Q ss_pred CHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCCcE
Q 041537 183 SEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 183 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~GV~ 261 (547)
...++++|||+|++|+|+|..+... +.+|+++++.+++++. +++.+.+.+.+.+++.||+
T Consensus 140 -----~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 200 (404)
T 3fg2_P 140 -----PDKKHVVVIGAGFIGLEFAATARAK--------------GLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIR 200 (404)
T ss_dssp -----GGCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCE
T ss_pred -----hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcE
Confidence 2356999999999999999999875 6899999999999884 8999999999999999999
Q ss_pred EEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeC
Q 041537 262 VLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALG 339 (547)
Q Consensus 262 v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiG 339 (547)
+++++.|++++. +.+....+.+|+. ++||.||+|+|+. |+. .+++.+++..+++|.||+++|+ +.|+|||+|
T Consensus 201 i~~~~~v~~i~~~~~~v~~V~~~dG~~--i~aD~Vv~a~G~~--p~~-~l~~~~gl~~~~Gi~vd~~~~t-~~~~iya~G 274 (404)
T 3fg2_P 201 MHYGVRATEIAAEGDRVTGVVLSDGNT--LPCDLVVVGVGVI--PNV-EIAAAAGLPTAAGIIVDQQLLT-SDPHISAIG 274 (404)
T ss_dssp EECSCCEEEEEEETTEEEEEEETTSCE--EECSEEEECCCEE--ECC-HHHHHTTCCBSSSEEECTTSBC-SSTTEEECG
T ss_pred EEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECcCCc--cCH-HHHHhCCCCCCCCEEECCCccc-CCCCEEEee
Confidence 999999999964 3444333345775 9999999999964 444 4667778743344999999998 899999999
Q ss_pred ccCccC
Q 041537 340 DCATID 345 (547)
Q Consensus 340 D~a~~~ 345 (547)
||+..+
T Consensus 275 D~a~~~ 280 (404)
T 3fg2_P 275 DCALFE 280 (404)
T ss_dssp GGEEEE
T ss_pred cceeec
Confidence 999864
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.6e-39 Score=338.52 Aligned_cols=265 Identities=25% Similarity=0.397 Sum_probs=212.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCCCCccC--CChhhhhccccCccccchhHHHHHHhCCCcEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQNYFAFT--PLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEA 102 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~~~~~~--p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (547)
++++|||||||+||+++|..|++.|+ +|+|||+++++.|. ++...+..+.. .+++... .+.+.+ ++++.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~--v~~~~~ 79 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRLD---CKRAPE--VEWLLG 79 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBCC---CTTSCS--CEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhHH---HHHHCC--CEEEcC
Confidence 45799999999999999999998777 59999999887663 23333444433 2222111 344555 667776
Q ss_pred -EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCC-CCccccccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 103 -EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGT-PGVLENCHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 103 -~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~i-pG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
+|+.+|++.++|.+.+ +. ++.||+||+|||++|+.|++ ||.+++++++++.+++.++++.+
T Consensus 80 ~~v~~i~~~~~~v~~~~----g~---~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~---------- 142 (408)
T 2gqw_A 80 VTAQSFDPQAHTVALSD----GR---TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL---------- 142 (408)
T ss_dssp CCEEEEETTTTEEEETT----SC---EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC----------
T ss_pred CEEEEEECCCCEEEECC----CC---EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh----------
Confidence 4999999999998865 44 89999999999999999999 99876777788999888776542
Q ss_pred CCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCC
Q 041537 181 GLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDG 259 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~G 259 (547)
...++++|||+|++|+|+|..|.++ +.+|+++++.+++++. +++++.+.+.+.|++.|
T Consensus 143 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 201 (408)
T 2gqw_A 143 -------RPQSRLLIVGGGVIGLELAATARTA--------------GVHVSLVETQPRLMSRAAPATLADFVARYHAAQG 201 (408)
T ss_dssp -------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTT
T ss_pred -------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCcccccccCHHHHHHHHHHHHHcC
Confidence 1346999999999999999999875 6899999999999984 89999999999999999
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCC-CCccEEeCCCCCcCCCCCEEEe
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQG-KRRVLATNEWLRVKECENVYAL 338 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~-~~g~i~Vd~~l~~~~~~~Vfai 338 (547)
|+++++++|++++++.+++ .+|+. ++||.||||+|+ .|+. .+++.+++. ++| |.||+++|| +.|+|||+
T Consensus 202 V~i~~~~~v~~i~~~~v~~---~~g~~--i~~D~vi~a~G~--~p~~-~l~~~~gl~~~~g-i~Vd~~~~t-~~~~IyA~ 271 (408)
T 2gqw_A 202 VDLRFERSVTGSVDGVVLL---DDGTR--IAADMVVVGIGV--LAND-ALARAAGLACDDG-IFVDAYGRT-TCPDVYAL 271 (408)
T ss_dssp CEEEESCCEEEEETTEEEE---TTSCE--EECSEEEECSCE--EECC-HHHHHHTCCBSSS-EECCTTCBC-SSTTEEEC
T ss_pred cEEEeCCEEEEEECCEEEE---CCCCE--EEcCEEEECcCC--CccH-HHHHhCCCCCCCC-EEECCCCcc-CCCCEEEE
Confidence 9999999999998544444 34764 999999999995 4544 356667773 345 999999998 89999999
Q ss_pred CccCccC
Q 041537 339 GDCATID 345 (547)
Q Consensus 339 GD~a~~~ 345 (547)
|||+..+
T Consensus 272 GD~~~~~ 278 (408)
T 2gqw_A 272 GDVTRQR 278 (408)
T ss_dssp GGGEEEE
T ss_pred EEEEEec
Confidence 9999864
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=4.4e-38 Score=344.60 Aligned_cols=282 Identities=22% Similarity=0.431 Sum_probs=229.0
Q ss_pred CCCCCCCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCC-ChhhhhccccCcc--ccchhHHHHHHhCCCcE
Q 041537 23 EKEREKKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTP-LLPSVTCGTVEAR--SIAEPVRNIIKKRNAEI 97 (547)
Q Consensus 23 ~~~~~~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p-~l~~~~~g~~~~~--~~~~~~~~~~~~~~~~v 97 (547)
++.+++++|||||||+|||+||..|++. +++|+|||+++++.|.+ .++....+..... .+...++.+.++.++.+
T Consensus 31 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v 110 (588)
T 3ics_A 31 KDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDI 110 (588)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEE
T ss_pred CCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEE
Confidence 4556778999999999999999999965 89999999999988865 4555555554332 24566777777888544
Q ss_pred EEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCc-c-ccccccCCHHHHHHHHHHHHHHHH
Q 041537 98 QFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGV-L-ENCHFLKELEDAQKIRRTVTDCFE 175 (547)
Q Consensus 98 ~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~-~-e~~~~~~~~~~a~~l~~~l~~~~~ 175 (547)
+ ...+|+.++++.+.+.+.+..+ + ....+.||+||||||++|..|++||. + ++.+..++..++..++..+..
T Consensus 111 ~-~~~~V~~id~~~~~v~v~~~~~-g-~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~--- 184 (588)
T 3ics_A 111 R-VLSEVVKINKEEKTITIKNVTT-N-ETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE--- 184 (588)
T ss_dssp E-CSEEEEEEETTTTEEEEEETTT-C-CEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH---
T ss_pred E-ECCEEEEEECCCCEEEEeecCC-C-CEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh---
Confidence 3 4789999999999998864211 2 13478999999999999999999998 3 566788889888887776542
Q ss_pred HccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHH
Q 041537 176 KAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKF 255 (547)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l 255 (547)
...++++|||+|++|+|+|..+..+ +.+|+++++.+++++.+++++.+.+.+.|
T Consensus 185 ------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 238 (588)
T 3ics_A 185 ------------KKPRHATVIGGGFIGVEMVENLRER--------------GIEVTLVEMANQVMPPIDYEMAAYVHEHM 238 (588)
T ss_dssp ------------HCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCTTSCHHHHHHHHHHH
T ss_pred ------------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCcccccCCHHHHHHHHHHH
Confidence 3456999999999999999999876 68999999999999999999999999999
Q ss_pred HhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCC
Q 041537 256 QRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKE 331 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~ 331 (547)
++.||+++++++|++++. +.+++. +|+. +++|.||+|+|. .|+. .+++.+++ +.+|+|.||+++|| +
T Consensus 239 ~~~GV~i~~~~~v~~i~~~~~~v~~~---~g~~--i~~D~Vi~a~G~--~p~~-~~l~~~g~~~~~~g~i~vd~~~~t-~ 309 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEENGAVVRLK---SGSV--IQTDMLILAIGV--QPES-SLAKGAGLALGVRGTIKVNEKFQT-S 309 (588)
T ss_dssp HHTTCEEECSCCEEEEEGGGTEEEET---TSCE--EECSEEEECSCE--EECC-HHHHHTTCCBCGGGCBCCCTTSBC-S
T ss_pred HHcCCEEEECCeEEEEecCCCEEEEC---CCCE--EEcCEEEEccCC--CCCh-HHHHhcCceEcCCCCEEECCcccc-C
Confidence 999999999999999976 455553 3765 999999999995 4554 35666666 57899999999999 8
Q ss_pred CCCEEEeCccCccC
Q 041537 332 CENVYALGDCATID 345 (547)
Q Consensus 332 ~~~VfaiGD~a~~~ 345 (547)
.|+|||+|||+..+
T Consensus 310 ~~~IyA~GD~~~~~ 323 (588)
T 3ics_A 310 DPHIYAIGDAIEVK 323 (588)
T ss_dssp STTEEECGGGBCEE
T ss_pred CCCEEEeeeeeecc
Confidence 99999999999754
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.2e-38 Score=341.99 Aligned_cols=279 Identities=22% Similarity=0.390 Sum_probs=224.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCC-ChhhhhccccCc-c-ccchhHHHHHHhCCCcEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTP-LLPSVTCGTVEA-R-SIAEPVRNIIKKRNAEIQFWEA 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p-~l~~~~~g~~~~-~-~~~~~~~~~~~~~~~~v~~~~~ 102 (547)
|++|||||||+|||+||..|++. +++|+|||+++++.|.+ .++....+.... . .+......+.++.+++++ +..
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 79 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVR-VKH 79 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEE-TTE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEE-ECC
Confidence 46999999999999999999865 89999999999988765 355555554432 2 234455666666774332 478
Q ss_pred EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 103 EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
+|+.+|++.+.+.+.+..+ + ...++.||+||||||++|+.|++||.+ .+.+.+++..++..+++.+..
T Consensus 80 ~V~~id~~~~~v~~~~~~~-g-~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~--------- 148 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLLD-G-SEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM--------- 148 (565)
T ss_dssp EEEEEETTTTEEEEEETTT-C-CEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH---------
T ss_pred EEEEEECCCCEEEEEecCC-C-CeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh---------
Confidence 9999999999998875321 2 134799999999999999999999985 567788888888877766532
Q ss_pred CCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcE
Q 041537 182 LSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~ 261 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++.+++++.+.+.+.|++.||+
T Consensus 149 ------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~ 208 (565)
T 3ntd_A 149 ------NNVEHATVVGGGFIGLEMMESLHHL--------------GIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVD 208 (565)
T ss_dssp ------TTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred ------CCCCEEEEECCCHHHHHHHHHHHhc--------------CCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCE
Confidence 3456999999999999999999876 68999999999999999999999999999999999
Q ss_pred EEcCceEEEEeC---------------------CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCC
Q 041537 262 VLTECRVVNVSD---------------------KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKR 318 (547)
Q Consensus 262 v~~~~~V~~v~~---------------------~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~ 318 (547)
+++++.|++++. +.+.+.. .+|+. ++||.||+|+|.. |+. .+++.+++ +.+
T Consensus 209 i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~--i~~D~vi~a~G~~--p~~-~l~~~~g~~~~~~ 282 (565)
T 3ntd_A 209 LRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGEL--LETDLLIMAIGVR--PET-QLARDAGLAIGEL 282 (565)
T ss_dssp EEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSCE--EEESEEEECSCEE--ECC-HHHHHHTCCBCTT
T ss_pred EEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCCE--EEcCEEEECcCCc--cch-HHHHhCCcccCCC
Confidence 999999999964 3444443 45664 9999999999964 444 35566665 678
Q ss_pred ccEEeCCCCCcCCCCCEEEeCccCccC
Q 041537 319 RVLATNEWLRVKECENVYALGDCATID 345 (547)
Q Consensus 319 g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 345 (547)
|+|.||+++|| +.|+|||+|||+..+
T Consensus 283 g~i~vd~~~~t-~~~~IyA~GD~~~~~ 308 (565)
T 3ntd_A 283 GGIKVNAMMQT-SDPAIYAVGDAVEEQ 308 (565)
T ss_dssp SSBCCCTTCBC-SSTTEEECGGGBCEE
T ss_pred CCEEECCCccc-CCCCEEEeeeeEeec
Confidence 99999999999 899999999999754
No 16
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.4e-37 Score=327.51 Aligned_cols=273 Identities=24% Similarity=0.422 Sum_probs=218.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCCCCccC--CChhhhhccccCccccchhHHHHHHhCCCcEEEEE-
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQNYFAFT--PLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE- 101 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~~~~~~--p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~- 101 (547)
++++|||||||+||+++|..|++.|+ +|+|||+++.+.|. ++...+..+......+.....+.+++.+ ++++.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~ 80 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQN--IQLLGG 80 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTT--EEEECS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCC--CEEEeC
Confidence 35799999999999999999998887 79999999876663 3334445554444555545566777777 66665
Q ss_pred EEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-cc---ccccCCHHHHHHHHHHHHHHHHHc
Q 041537 102 AEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-EN---CHFLKELEDAQKIRRTVTDCFEKA 177 (547)
Q Consensus 102 ~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~---~~~~~~~~~a~~l~~~l~~~~~~~ 177 (547)
.+|+.++++.+.|.+.+ |. ++.||+||+|||++|+.|++||.+ ++ ++.+++.+++.++++.+
T Consensus 81 ~~v~~i~~~~~~v~~~~----g~---~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l------- 146 (431)
T 1q1r_A 81 TQVTAINRDRQQVILSD----GR---ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL------- 146 (431)
T ss_dssp CCEEEEETTTTEEEETT----SC---EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-------
T ss_pred CEEEEEECCCCEEEECC----CC---EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-------
Confidence 46899999989998865 44 899999999999999999999975 34 67788999887776543
Q ss_pred cCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHH
Q 041537 178 VLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQ 256 (547)
Q Consensus 178 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~ 256 (547)
...++++|||+|++|+|+|..|.++ +.+|+++++.+++++. +++++.+.+.+.++
T Consensus 147 ----------~~~~~vvViGgG~~g~E~A~~l~~~--------------G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 202 (431)
T 1q1r_A 147 ----------IADNRLVVIGGGYIGLEVAATAIKA--------------NMHVTLLDTAARVLERVTAPPVSAFYEHLHR 202 (431)
T ss_dssp ----------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCccccchhhHHHHHHHHHHHH
Confidence 2346999999999999999999876 6899999999999985 89999999999999
Q ss_pred hCCcEEEcCceEEEEeC----CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCC
Q 041537 257 RDGIEVLTECRVVNVSD----KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKEC 332 (547)
Q Consensus 257 ~~GV~v~~~~~V~~v~~----~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~ 332 (547)
+.||+++++++|++++. +.+......+|+. ++||.||+|+|+ .|+. .+++.+++.-+++|.||+++|| +.
T Consensus 203 ~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~--i~~D~Vv~a~G~--~p~~-~l~~~~gl~~~~gi~Vd~~~~t-s~ 276 (431)
T 1q1r_A 203 EAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR--LPADLVIAGIGL--IPNC-ELASAAGLQVDNGIVINEHMQT-SD 276 (431)
T ss_dssp HHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE--EECSEEEECCCE--EECC-HHHHHTTCCBSSSEECCTTSBC-SS
T ss_pred hCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE--EEcCEEEECCCC--CcCc-chhhccCCCCCCCEEECCCccc-CC
Confidence 99999999999999974 3442222345765 999999999995 4554 4666777732344999999999 89
Q ss_pred CCEEEeCccCccC
Q 041537 333 ENVYALGDCATID 345 (547)
Q Consensus 333 ~~VfaiGD~a~~~ 345 (547)
|+|||+|||+..+
T Consensus 277 ~~IyA~GD~~~~~ 289 (431)
T 1q1r_A 277 PLIMAVGDCARFH 289 (431)
T ss_dssp TTEEECGGGEEEE
T ss_pred CCEEEEEeEEEEc
Confidence 9999999999864
No 17
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=6.6e-38 Score=334.20 Aligned_cols=279 Identities=22% Similarity=0.330 Sum_probs=202.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCC-ChhhhhccccCc-ccc-------chhHHHHHHhCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTP-LLPSVTCGTVEA-RSI-------AEPVRNIIKKRNAE 96 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p-~l~~~~~g~~~~-~~~-------~~~~~~~~~~~~~~ 96 (547)
+++|||||||+|||++|..|++. |++|+|||+++++.|.+ .++....+.... ..+ ....+.+.+..+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 80 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKD-- 80 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcC--
Confidence 57999999999999999999966 89999999999987754 345544444332 222 223333334456
Q ss_pred EEE-EEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHH
Q 041537 97 IQF-WEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCF 174 (547)
Q Consensus 97 v~~-~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~ 174 (547)
+++ ...+|+.+|++.+.+.+.+..+ | ....+.||+||+|||++|..|++||.+ ++.+.+.+.+++..+++.+..
T Consensus 81 i~~~~~~~V~~id~~~~~v~~~~~~~-g-~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~-- 156 (472)
T 3iwa_A 81 VEALVETRAHAIDRAAHTVEIENLRT-G-ERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA-- 156 (472)
T ss_dssp CEEECSEEEEEEETTTTEEEEEETTT-C-CEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT--
T ss_pred cEEEECCEEEEEECCCCEEEEeecCC-C-CEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc--
Confidence 444 4689999999999998875211 2 134799999999999999999999985 566778888888777655321
Q ss_pred HHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-cccHHHHHHHHH
Q 041537 175 EKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-SFDERISSFAEK 253 (547)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~~~~ 253 (547)
...++++|||+|++|+|+|..+..+. +.+|+++++.+++++ .+++.+.+.+.+
T Consensus 157 -------------~~~~~vvViGgG~~g~e~A~~l~~~~-------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 210 (472)
T 3iwa_A 157 -------------GEVSKAVIVGGGFIGLEMAVSLADMW-------------GIDTTVVELADQIMPGFTSKSLSQMLRH 210 (472)
T ss_dssp -------------TSCSEEEEECCSHHHHHHHHHHHHHH-------------CCEEEEECSSSSSSTTTSCHHHHHHHHH
T ss_pred -------------CCCCEEEEECCCHHHHHHHHHHHHhc-------------CCcEEEEEccCcccccccCHHHHHHHHH
Confidence 23469999999999999999998762 479999999999999 899999999999
Q ss_pred HHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCc
Q 041537 254 KFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRV 329 (547)
Q Consensus 254 ~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~ 329 (547)
.+++.||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|. .|+. .+++++++ +.+|+|.||+++||
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~a~G~--~p~~-~l~~~~gl~~~~~g~i~vd~~~~t 284 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENGKVARVI-TDKRT--LDADLVILAAGV--SPNT-QLARDAGLELDPRGAIIVDTRMRT 284 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSSBEEEEE-ESSCE--EECSEEEECSCE--EECC-HHHHHHTCCBCTTCCEECCTTCBC
T ss_pred HHHhcCCEEEeCCEEEEEEccCCeEEEEE-eCCCE--EEcCEEEECCCC--CcCH-HHHHhCCccCCCCCCEEECCCccc
Confidence 99999999999999999975 3444332 34764 999999999995 4444 35566666 67899999999999
Q ss_pred CCCCCEEEeCccCccC
Q 041537 330 KECENVYALGDCATID 345 (547)
Q Consensus 330 ~~~~~VfaiGD~a~~~ 345 (547)
+.|+|||+|||+..+
T Consensus 285 -~~~~Iya~GD~~~~~ 299 (472)
T 3iwa_A 285 -SDPDIFAGGDCVTIP 299 (472)
T ss_dssp -SSTTEEECGGGEEEE
T ss_pred -CCCCEEEeccceecc
Confidence 899999999999764
No 18
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.1e-38 Score=335.31 Aligned_cols=276 Identities=20% Similarity=0.283 Sum_probs=218.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCC---CeEEEEcCCCCCccCCC-hhhhhccc-cCccccchhHHHHHHhCCCcEEE-
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSS---YDVQVVSPQNYFAFTPL-LPSVTCGT-VEARSIAEPVRNIIKKRNAEIQF- 99 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g---~~Vtlid~~~~~~~~p~-l~~~~~g~-~~~~~~~~~~~~~~~~~~~~v~~- 99 (547)
+++++|||||||+||+++|..|++.| ++|+|||+++.+.+.+. ++.+..+. .++.++.....+.+++.+ +++
T Consensus 33 ~m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~v~ 110 (490)
T 2bc0_A 33 RWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLG--AKVY 110 (490)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTT--CEEE
T ss_pred ccCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCC--CEEE
Confidence 34589999999999999999999776 99999999987766553 33333343 334555556667777777 554
Q ss_pred EEEEEEEEECCCCEEEEe-cCCCCCCceeeeecCEEEEccCCCccCCCCCCcc------------ccccccCCHHHHHHH
Q 041537 100 WEAEAIKIDAAKNEVFCK-SNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL------------ENCHFLKELEDAQKI 166 (547)
Q Consensus 100 ~~~~v~~id~~~~~v~~~-~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~------------e~~~~~~~~~~a~~l 166 (547)
...+|+.++++.+.|.+. + +. ..++.||+||||||++|..|++||.+ ++++.+++.+++..+
T Consensus 111 ~~~~v~~i~~~~~~v~v~~~----g~-~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~ 185 (490)
T 2bc0_A 111 MESPVQSIDYDAKTVTALVD----GK-NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADV 185 (490)
T ss_dssp TTCCEEEEETTTTEEEEEET----TE-EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHH
T ss_pred eCCEEEEEECCCCEEEEEeC----Cc-EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHH
Confidence 466799999999999886 4 21 23799999999999999999999975 457778888888877
Q ss_pred HHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-cccH
Q 041537 167 RRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-SFDE 245 (547)
Q Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~ 245 (547)
++.+. ....++++|||+|++|+|+|..|.++ +.+|+++++.+++++ .+++
T Consensus 186 ~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~ 236 (490)
T 2bc0_A 186 IAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRK--------------GKEVVLIDVVDTCLAGYYDR 236 (490)
T ss_dssp HHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCH
T ss_pred HHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHC--------------CCeEEEEEcccchhhhHHHH
Confidence 66431 02356999999999999999999876 689999999999999 7999
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeCCe-EE-EEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHh-CCCCCccEE
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSDKE-IT-MKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI-GQGKRRVLA 322 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~-v~-~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~-~~~~~g~i~ 322 (547)
++.+.+.+.|++.||+++++++|++++.++ +. +.. +|++ +++|.||||+|. .|+.. +++.. .++.+|+|.
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~--~g~~--i~~D~Vi~a~G~--~p~~~-ll~~~l~~~~~G~I~ 309 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT--DKNE--YDVDMVILAVGF--RPNTT-LGNGKIDLFRNGAFL 309 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE--SSCE--EECSEEEECCCE--EECCG-GGTTCSCBCTTSCBC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE--CCcE--EECCEEEECCCC--CcChH-HHHhhhccCCCCCEE
Confidence 999999999999999999999999998643 32 222 3654 999999999996 45443 33333 336788999
Q ss_pred eCCCCCcCCCCCEEEeCccCccC
Q 041537 323 TNEWLRVKECENVYALGDCATID 345 (547)
Q Consensus 323 Vd~~l~~~~~~~VfaiGD~a~~~ 345 (547)
||+++|| +.|+|||+|||+..+
T Consensus 310 Vd~~~~t-~~~~IyA~GD~~~~~ 331 (490)
T 2bc0_A 310 VNKRQET-SIPGVYAIGDCATIY 331 (490)
T ss_dssp CCTTCBC-SSTTEEECGGGBCEE
T ss_pred ECCCccc-CCCCEEEeeeeEEec
Confidence 9999999 899999999999854
No 19
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2.4e-37 Score=328.12 Aligned_cols=275 Identities=19% Similarity=0.336 Sum_probs=219.2
Q ss_pred CeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCCC-hhhhhcccc---CccccchhHHHHHHhCCCcEEE-EE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTPL-LPSVTCGTV---EARSIAEPVRNIIKKRNAEIQF-WE 101 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p~-l~~~~~g~~---~~~~~~~~~~~~~~~~~~~v~~-~~ 101 (547)
++|||||||+||+++|..|++. |++|+|||++++..+.+. ++.+..+.. ++.++...+...+++.+ +++ ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g--v~~~~~ 78 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLG--ANVQMR 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTT--CEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcC--CEEEeC
Confidence 4899999999999999999976 999999999987766553 343444443 35556666677778887 444 45
Q ss_pred EEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 102 AEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 102 ~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
.++..++++.+.|.+.+..+ ++ ..++.||+||+|||++|..|++||.+ ++++.+++.+++..+++..
T Consensus 79 ~~v~~i~~~~~~v~v~~~~~-g~-~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---------- 146 (452)
T 2cdu_A 79 HQVTNVDPETKTIKVKDLIT-NE-EKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA---------- 146 (452)
T ss_dssp EEEEEEEGGGTEEEEEETTT-CC-EEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG----------
T ss_pred CEEEEEEcCCCEEEEEecCC-Cc-eEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh----------
Confidence 67999999888888864211 11 23799999999999999999999986 4677788888888776542
Q ss_pred CCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-cccHHHHHHHHHHHHhCC
Q 041537 181 GLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-SFDERISSFAEKKFQRDG 259 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~~~~~l~~~G 259 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++ .+++++.+.+.+.|++.|
T Consensus 147 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 205 (452)
T 2cdu_A 147 -------PKAKTITIIGSGYIGAELAEAYSNQ--------------NYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHG 205 (452)
T ss_dssp -------GGCSEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTT
T ss_pred -------ccCCeEEEECcCHHHHHHHHHHHhc--------------CCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCC
Confidence 2356999999999999999998865 689999999999999 799999999999999999
Q ss_pred cEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHh-CCCCCccEEeCCCCCcCCCCCEE
Q 041537 260 IEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI-GQGKRRVLATNEWLRVKECENVY 336 (547)
Q Consensus 260 V~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~Vf 336 (547)
|+++++++|++++. +.+..... +|++ +++|.||||+|. .|+.. +++.. .++.+|+|.||+++|| +.|+||
T Consensus 206 v~i~~~~~v~~i~~~~~~v~~v~~-~g~~--i~~D~vv~a~G~--~p~~~-ll~~~l~~~~~G~i~Vd~~~~t-~~~~Iy 278 (452)
T 2cdu_A 206 VNLVLGSKVAAFEEVDDEIITKTL-DGKE--IKSDIAILCIGF--RPNTE-LLKGKVAMLDNGAIITDEYMHS-SNRDIF 278 (452)
T ss_dssp CEEEESSCEEEEEEETTEEEEEET-TSCE--EEESEEEECCCE--EECCG-GGTTTSCBCTTSCBCCCTTSBC-SSTTEE
T ss_pred CEEEcCCeeEEEEcCCCeEEEEEe-CCCE--EECCEEEECcCC--CCCHH-HHHHhhhcCCCCCEEECCCcCc-CCCCEE
Confidence 99999999999974 44543333 4654 999999999995 45443 43333 3367889999999999 999999
Q ss_pred EeCccCccC
Q 041537 337 ALGDCATID 345 (547)
Q Consensus 337 aiGD~a~~~ 345 (547)
|+|||+..+
T Consensus 279 A~GD~~~~~ 287 (452)
T 2cdu_A 279 AAGDSAAVH 287 (452)
T ss_dssp ECSTTBCEE
T ss_pred EcceEEEec
Confidence 999999854
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-37 Score=328.53 Aligned_cols=274 Identities=27% Similarity=0.430 Sum_probs=205.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCC-ChhhhhccccCccccchhH-HHHHHhCCCcEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTP-LLPSVTCGTVEARSIAEPV-RNIIKKRNAEIQFWEA 102 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p-~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~v~~~~~ 102 (547)
++++|||||||+||+++|..|++. +++|+|||+++++.+.+ .++.+..+...+.++.... +.+.++.+ ++++.+
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~g--i~v~~~ 79 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRG--IDLHLN 79 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTT--CEEETT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcC--cEEEec
Confidence 457999999999999999999865 89999999999887765 3455544443444444333 33335677 556655
Q ss_pred -EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 103 -EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 103 -~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
+|+.+++..+.|.+.+ + ..++.||+||||||+.|+.|++||.+ ++++..++.+++..+++.+..
T Consensus 80 ~~v~~i~~~~~~v~~~~----g--~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~-------- 145 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENG----G--EKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK-------- 145 (449)
T ss_dssp CEEEEECSSEEEEECSS----S--EEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS--------
T ss_pred CEEEEEecCCCEEEECC----c--eEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh--------
Confidence 8999998877775533 2 23799999999999999999999986 456777888888877665311
Q ss_pred CCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCC
Q 041537 181 GLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDG 259 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~G 259 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 146 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~- 203 (449)
T 3kd9_A 146 -------YKVENVVIIGGGYIGIEMAEAFAAQ--------------GKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH- 203 (449)
T ss_dssp -------SCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-
Confidence 2456999999999999999999876 6899999999999997 9999999999999999
Q ss_pred cEEEcCceEEEEeCCe-EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCCEE
Q 041537 260 IEVLTECRVVNVSDKE-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECENVY 336 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~Vf 336 (547)
|++++++.|.+++.+. +.... .+|++ +++|.||||+|. .|+. .+++.+++ +.+|+|.||+++|| +.|+||
T Consensus 204 v~i~~~~~v~~i~~~~~v~~v~-~~g~~--i~~D~Vv~a~G~--~p~~-~l~~~~gl~~~~~G~i~vd~~~~t-~~~~Iy 276 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEERVEKVV-TDAGE--YKAELVILATGI--KPNI-ELAKQLGVRIGETGAIWTNEKMQT-SVENVY 276 (449)
T ss_dssp SEEEESCCEEEEECSSSCCEEE-ETTEE--EECSEEEECSCE--EECC-HHHHHTTCCBCTTSSBCCCTTCBC-SSTTEE
T ss_pred cEEEeCCeEEEEeccCcEEEEE-eCCCE--EECCEEEEeeCC--ccCH-HHHHhCCccCCCCCCEEECCCCcc-CCCCEE
Confidence 9999999999998653 32222 23654 999999999995 4554 45666666 67789999999999 999999
Q ss_pred EeCccCccC
Q 041537 337 ALGDCATID 345 (547)
Q Consensus 337 aiGD~a~~~ 345 (547)
|+|||+..+
T Consensus 277 A~GD~~~~~ 285 (449)
T 3kd9_A 277 AAGDVAETR 285 (449)
T ss_dssp ECSTTBCEE
T ss_pred Eeeeeeeec
Confidence 999999754
No 21
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-37 Score=329.49 Aligned_cols=273 Identities=19% Similarity=0.303 Sum_probs=206.5
Q ss_pred CeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCCC-hhhhhcccc-CccccchhHHHHHHhCCCcEEE-EEEE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTPL-LPSVTCGTV-EARSIAEPVRNIIKKRNAEIQF-WEAE 103 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p~-l~~~~~g~~-~~~~~~~~~~~~~~~~~~~v~~-~~~~ 103 (547)
++|||||||+||+++|..|++. +++|+|||++++++|.+. ++.+..+.. ...++.......+.+.+ +++ ...+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--i~~~~~~~ 80 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQK--IQLLLNRE 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTT--EEEECSCE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCC--CEEEECCE
Confidence 6999999999999999999965 899999999998887653 344444433 33445555666777787 554 4679
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGL 182 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 182 (547)
|+.+|++.+.+.+... + ...++.||+||||||++|..|++||.+ ++.+..++.+++..+++..
T Consensus 81 V~~id~~~~~v~v~~~---~-~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------------ 144 (452)
T 3oc4_A 81 VVAMDVENQLIAWTRK---E-EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL------------ 144 (452)
T ss_dssp EEEEETTTTEEEEEET---T-EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH------------
T ss_pred EEEEECCCCEEEEEec---C-ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------------
Confidence 9999999999887511 1 124899999999999999999999986 4556666666655544332
Q ss_pred CHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCCcE
Q 041537 183 SEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 183 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~GV~ 261 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.|++.||+
T Consensus 145 -----~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~ 205 (452)
T 3oc4_A 145 -----ENSQTVAVIGAGPIGMEAIDFLVKM--------------KKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVI 205 (452)
T ss_dssp -----HTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEE
T ss_pred -----hcCCEEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCE
Confidence 2346999999999999999999876 6899999999999996 8999999999999999999
Q ss_pred EEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeC
Q 041537 262 VLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALG 339 (547)
Q Consensus 262 v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiG 339 (547)
++++++|++++ ++++.+.. ++| + ++||.||+|+|..+ +...+...+.++.+|+|.||+++|| +.|+|||+|
T Consensus 206 i~~~~~v~~i~~~~~~v~v~~-~~g-~--i~aD~Vv~A~G~~p--~~~~l~~~~~~~~~g~i~vd~~~~t-~~~~IyA~G 278 (452)
T 3oc4_A 206 FHFEETVLGIEETANGIVLET-SEQ-E--ISCDSGIFALNLHP--QLAYLDKKIQRNLDQTIAVDAYLQT-SVPNVFAIG 278 (452)
T ss_dssp EEETCCEEEEEECSSCEEEEE-SSC-E--EEESEEEECSCCBC--CCSSCCTTSCBCTTSCBCCCTTCBC-SSTTEEECG
T ss_pred EEeCCEEEEEEccCCeEEEEE-CCC-E--EEeCEEEECcCCCC--ChHHHHhhhccCCCCCEEECcCccC-CCCCEEEEE
Confidence 99999999997 45564443 334 3 99999999999654 4422211234577899999999999 899999999
Q ss_pred ccCccC
Q 041537 340 DCATID 345 (547)
Q Consensus 340 D~a~~~ 345 (547)
||+..+
T Consensus 279 D~~~~~ 284 (452)
T 3oc4_A 279 DCISVM 284 (452)
T ss_dssp GGBCEE
T ss_pred eeEEec
Confidence 999854
No 22
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.1e-36 Score=325.23 Aligned_cols=278 Identities=25% Similarity=0.407 Sum_probs=217.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCCC-hhhhhcccc-CccccchhHHHHH-HhCCCcEEEEE-
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTPL-LPSVTCGTV-EARSIAEPVRNII-KKRNAEIQFWE- 101 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p~-l~~~~~g~~-~~~~~~~~~~~~~-~~~~~~v~~~~- 101 (547)
+++|||||||+||+++|..|++. |.+|+|||+++.+.|.+. ++.+..+.. +..++.....+.+ +..+ ++++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--v~~~~~ 113 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYG--IDAKVR 113 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTC--CEEESS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcC--CEEEeC
Confidence 57999999999999999999864 899999999988766543 454444432 2344444444444 4446 55554
Q ss_pred EEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 102 AEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 102 ~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
.+|+.++++.+.|.+.+.. +|+ ..++.||+||||||++|..|++||.+ ++++.+++.+++.++++.+.+
T Consensus 114 ~~v~~i~~~~~~v~v~~~~-~g~-~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~-------- 183 (480)
T 3cgb_A 114 HEVTKVDTEKKIVYAEHTK-TKD-VFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET-------- 183 (480)
T ss_dssp EEEEEEETTTTEEEEEETT-TCC-EEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS--------
T ss_pred CEEEEEECCCCEEEEEEcC-CCc-eEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh--------
Confidence 7899999999988886411 021 23699999999999999999999986 567778899998888776521
Q ss_pred CCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCc
Q 041537 181 GLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGI 260 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV 260 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+.+++.+++++.+.+.+.+++.||
T Consensus 184 -------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv 242 (480)
T 3cgb_A 184 -------NKVEDVTIIGGGAIGLEMAETFVEL--------------GKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHI 242 (480)
T ss_dssp -------SCCCEEEEECCHHHHHHHHHHHHHT--------------TCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTC
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCc
Confidence 2446999999999999999999876 6899999999999999999999999999999999
Q ss_pred EEEcCceEEEEeCC-eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCCEEE
Q 041537 261 EVLTECRVVNVSDK-EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECENVYA 337 (547)
Q Consensus 261 ~v~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~Vfa 337 (547)
++++++.|++++.+ ++.....+ +. ++++|.||+|+|.. |+. .+++.+++ +.+|+|.||+++|| +.|+|||
T Consensus 243 ~i~~~~~v~~i~~~~~v~~v~~~-~~--~i~~D~vi~a~G~~--p~~-~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~IyA 315 (480)
T 3cgb_A 243 EILTNENVKAFKGNERVEAVETD-KG--TYKADLVLVSVGVK--PNT-DFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYA 315 (480)
T ss_dssp EEECSCCEEEEEESSBEEEEEET-TE--EEECSEEEECSCEE--ESC-GGGTTSCCCBCTTSCBCCCTTSBC-SSTTEEE
T ss_pred EEEcCCEEEEEEcCCcEEEEEEC-CC--EEEcCEEEECcCCC--cCh-HHHHhCCcccCCCCCEEECCCccC-CCCCEEE
Confidence 99999999999754 34322222 44 39999999999964 443 24455555 56789999999999 8999999
Q ss_pred eCccCccC
Q 041537 338 LGDCATID 345 (547)
Q Consensus 338 iGD~a~~~ 345 (547)
+|||+..+
T Consensus 316 ~GD~~~~~ 323 (480)
T 3cgb_A 316 AGDCATHY 323 (480)
T ss_dssp CGGGBCEE
T ss_pred eeeEEEec
Confidence 99999754
No 23
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=3.5e-36 Score=312.42 Aligned_cols=268 Identities=20% Similarity=0.370 Sum_probs=213.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCC--CeEEEEcCCCCCcc-CCChhhhhccccCccccch-hHHHHHHhCCCcEEEE-EE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSS--YDVQVVSPQNYFAF-TPLLPSVTCGTVEARSIAE-PVRNIIKKRNAEIQFW-EA 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g--~~Vtlid~~~~~~~-~p~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~v~~~-~~ 102 (547)
+++|||||||+||+++|..|++.| .+|+|||+++...| .++++....+.....++.. .+..+++..+ ++++ ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~ 81 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLN--ARILTHT 81 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTT--CEEECSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCC--cEEEeCC
Confidence 579999999999999999999887 56999999875544 3445444443333444433 3566677777 5665 45
Q ss_pred EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 103 EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
+++.++++.+.|.+.+ . ++.||+||+|||+.|..|++||.. ++++..+++.++..++..+
T Consensus 82 ~v~~i~~~~~~v~~~~-----~---~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~----------- 142 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIGE-----E---EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA----------- 142 (384)
T ss_dssp CCCEEEGGGTEEEETT-----E---EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH-----------
T ss_pred EEEEEECCCCEEEECC-----c---EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh-----------
Confidence 7899999888888753 2 799999999999999999999976 5678888888887766554
Q ss_pred CCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-ccHHHHHHHHHHHHhCCc
Q 041537 182 LSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-FDERISSFAEKKFQRDGI 260 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~l~~~GV 260 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++.+.+.+.+.+++.||
T Consensus 143 ------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv 202 (384)
T 2v3a_A 143 ------AGKRRVLLLGAGLIGCEFANDLSSG--------------GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGV 202 (384)
T ss_dssp ------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTC
T ss_pred ------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCC
Confidence 2246999999999999999999876 6899999999999987 489999999999999999
Q ss_pred EEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCccEEeCCCCCcCCCCCEEE
Q 041537 261 EVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLATNEWLRVKECENVYA 337 (547)
Q Consensus 261 ~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~Vfa 337 (547)
+++++++|++++. +.+.+.. .+|+. +++|.||+|+|. .|+.. +++.+++ .++| |.||+++|| +.|+|||
T Consensus 203 ~i~~~~~v~~i~~~~~~~~v~~-~~g~~--i~~d~vv~a~G~--~p~~~-l~~~~g~~~~~g-i~vd~~~~t-~~~~IyA 274 (384)
T 2v3a_A 203 RFHLGPVLASLKKAGEGLEAHL-SDGEV--IPCDLVVSAVGL--RPRTE-LAFAAGLAVNRG-IVVDRSLRT-SHANIYA 274 (384)
T ss_dssp EEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCE--EECCH-HHHHTTCCBSSS-EEECTTCBC-SSTTEEE
T ss_pred EEEeCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEECcCC--CcCHH-HHHHCCCCCCCC-EEECCCCCC-CCCCEEE
Confidence 9999999999964 4444443 35764 999999999995 55553 6667777 2456 999999998 8999999
Q ss_pred eCccCcc
Q 041537 338 LGDCATI 344 (547)
Q Consensus 338 iGD~a~~ 344 (547)
+|||+..
T Consensus 275 ~GD~~~~ 281 (384)
T 2v3a_A 275 LGDCAEV 281 (384)
T ss_dssp CGGGEEE
T ss_pred eeeeeeE
Confidence 9999864
No 24
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.5e-36 Score=321.55 Aligned_cols=276 Identities=20% Similarity=0.314 Sum_probs=217.2
Q ss_pred CeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCccCCC-hhhhhcccc-CccccchhHHHHHHhCCCcEEE-EEEE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFAFTPL-LPSVTCGTV-EARSIAEPVRNIIKKRNAEIQF-WEAE 103 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~~~p~-l~~~~~g~~-~~~~~~~~~~~~~~~~~~~v~~-~~~~ 103 (547)
++|||||||+||+++|..|++. |++|+|||++++++|.+. ++.+..+.. +..++...+.+.+++.+ +++ ...+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~~ 78 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRG--VNVFSNTE 78 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTT--CEEEETEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCC--CEEEECCE
Confidence 4899999999999999999865 999999999988776553 444444443 34555566667777777 444 5678
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGL 182 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 182 (547)
++.++++.+.|.+.+.. +|+ ..++.||+||||||++|..|++||.+ ++++.+++.+++.++++.+.+
T Consensus 79 v~~i~~~~~~v~~~~~~-~g~-~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~---------- 146 (447)
T 1nhp_A 79 ITAIQPKEHQVTVKDLV-SGE-ERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVD---------- 146 (447)
T ss_dssp EEEEETTTTEEEEEETT-TCC-EEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTC----------
T ss_pred EEEEeCCCCEEEEEecC-CCc-eEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhh----------
Confidence 99999999999886411 022 23589999999999999999999986 567778888888887765420
Q ss_pred CHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-cccHHHHHHHHHHHHhCCcE
Q 041537 183 SEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-SFDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 183 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~~~~~l~~~GV~ 261 (547)
...++++|||+|++|+|+|..+.++ +.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 147 -----~~~~~vvIiG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~ 207 (447)
T 1nhp_A 147 -----PEVNNVVVIGSGYIGIEAAEAFAKA--------------GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNIT 207 (447)
T ss_dssp -----TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEE
T ss_pred -----cCCCeEEEECCCHHHHHHHHHHHHC--------------CCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCE
Confidence 1346999999999999999999875 689999999999998 68999999999999999999
Q ss_pred EEcCceEEEEeCCe-E-EEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHh-CCCCCccEEeCCCCCcCCCCCEEEe
Q 041537 262 VLTECRVVNVSDKE-I-TMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI-GQGKRRVLATNEWLRVKECENVYAL 338 (547)
Q Consensus 262 v~~~~~V~~v~~~~-v-~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~Vfai 338 (547)
+++++.|++++.++ + .+.. +|+. +++|.||+|+|.. |+.. +++.. .++.+|+|.||+++|| +.|+|||+
T Consensus 208 i~~~~~v~~i~~~~~v~~v~~--~~~~--i~~d~vi~a~G~~--p~~~-~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iya~ 279 (447)
T 1nhp_A 208 IATGETVERYEGDGRVQKVVT--DKNA--YDADLVVVAVGVR--PNTA-WLKGTLELHPNGLIKTDEYMRT-SEPDVFAV 279 (447)
T ss_dssp EEESCCEEEEECSSBCCEEEE--SSCE--EECSEEEECSCEE--ESCG-GGTTTSCBCTTSCBCCCTTCBC-SSTTEEEC
T ss_pred EEcCCEEEEEEccCcEEEEEE--CCCE--EECCEEEECcCCC--CChH-HHHhhhhhcCCCcEEECccccC-CCCCEEEe
Confidence 99999999997653 3 2222 2543 9999999999954 4443 33333 3356789999999999 89999999
Q ss_pred CccCccC
Q 041537 339 GDCATID 345 (547)
Q Consensus 339 GD~a~~~ 345 (547)
|||+..+
T Consensus 280 GD~~~~~ 286 (447)
T 1nhp_A 280 GDATLIK 286 (447)
T ss_dssp GGGSCEE
T ss_pred eeEEEee
Confidence 9999753
No 25
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.2e-36 Score=322.38 Aligned_cols=278 Identities=17% Similarity=0.281 Sum_probs=205.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCC--CCCeEEEEcCCCCCccC-C-Chhhhhcccc---------------------Ccc
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDV--SSYDVQVVSPQNYFAFT-P-LLPSVTCGTV---------------------EAR 80 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~--~g~~Vtlid~~~~~~~~-p-~l~~~~~g~~---------------------~~~ 80 (547)
+..++|||||||+||++||..|++ .+.+|+|||++++++|. | +...+..+.. .+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 446799999999999999999874 48999999999887663 2 2222211110 000
Q ss_pred ccchhHHHHHHhCCCcEEEEEE-EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCc-----cccc
Q 041537 81 SIAEPVRNIIKKRNAEIQFWEA-EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGV-----LENC 154 (547)
Q Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~-----~e~~ 154 (547)
+.....+.+.+....+++++.+ +|+.||++.++|.+.+ |. ++.||+||||||++|+.+++++. .++.
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~----g~---~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v 161 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLND----GS---QITYEKCLIATGGTPRSLSAIDRAGAEVKSRT 161 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETT----SC---EEEEEEEEECCCEEECCCHHHHTSCHHHHHTE
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECC----CC---EEECCEEEECCCCCCCCCCCcccccccccCce
Confidence 0000001111101124777775 8999999999999875 54 89999999999999987766552 2456
Q ss_pred cccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEe
Q 041537 155 HFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQ 234 (547)
Q Consensus 155 ~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~ 234 (547)
+.+++.+++..++..+. ..++++|||||++|+|+|..|.+..++ .+.+|++++
T Consensus 162 ~~~~~~~d~~~l~~~~~-----------------~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~~v~ 214 (493)
T 1m6i_A 162 TLFRKIGDFRSLEKISR-----------------EVKSITIIGGGFLGSELACALGRKARA----------LGTEVIQLF 214 (493)
T ss_dssp EECCSHHHHHHHHHHHH-----------------HCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEEEEC
T ss_pred EEEcCHHHHHHHHHHhh-----------------cCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEEEEe
Confidence 77889999888776542 346999999999999999999886532 157999999
Q ss_pred cCCccCC-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH
Q 041537 235 SGDHILN-SFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME 311 (547)
Q Consensus 235 ~~~~il~-~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~ 311 (547)
+.+.+++ .+++.+.+.+.+.++++||++++++.|++++. +.+.+.. .+|++ ++||.||||+|+. |+. .+++
T Consensus 215 ~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l-~dG~~--i~aD~Vv~a~G~~--pn~-~l~~ 288 (493)
T 1m6i_A 215 PEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKL-KDGRK--VETDHIVAAVGLE--PNV-ELAK 288 (493)
T ss_dssp SSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCCEE--ECC-TTHH
T ss_pred cCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEE-CCCCE--EECCEEEECCCCC--ccH-HHHH
Confidence 9887665 47889999999999999999999999999963 4444433 45765 9999999999964 444 3555
Q ss_pred HhCC--CC-CccEEeCCCCCcCCCCCEEEeCccCccC
Q 041537 312 QIGQ--GK-RRVLATNEWLRVKECENVYALGDCATID 345 (547)
Q Consensus 312 ~~~~--~~-~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 345 (547)
.+++ +. +|+|.||++||+ .|+|||+|||+..+
T Consensus 289 ~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~ 323 (493)
T 1m6i_A 289 TGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFY 323 (493)
T ss_dssp HHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEE
T ss_pred HcCCccccCCCcEEECCCccc--CCCeeEeeeeEecc
Confidence 6666 33 578999999998 59999999999864
No 26
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5.1e-36 Score=319.81 Aligned_cols=269 Identities=18% Similarity=0.269 Sum_probs=196.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChh---------------------hhh-ccc------cC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLP---------------------SVT-CGT------VE 78 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~---------------------~~~-~g~------~~ 78 (547)
.+++|+|||||+||+++|..|++.|++|+|||+++.++++.... ... .|. .+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 35799999999999999999999999999999997664431110 000 010 01
Q ss_pred cccc-----------chhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCC
Q 041537 79 ARSI-----------AEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGT 147 (547)
Q Consensus 79 ~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~i 147 (547)
...+ ...+..++++.+ ++++.+++..+|+....|.+.+ +. ..++.||+||+|||+.|..|++
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~~~~v~~~~----gg-~~~~~~d~lViAtGs~p~~p~i 157 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNK--VVHVNGYGKITGKNQVTATKAD----GG-TQVIDTKNILIATGSEVTPFPG 157 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEEEETTEEEEECTT----SC-EEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCCEEEEEecC----CC-cEEEEeCEEEECCCCCCCCCCC
Confidence 1111 111345566666 6778888888876433333322 11 2379999999999999999999
Q ss_pred CCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCC
Q 041537 148 PGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDL 227 (547)
Q Consensus 148 pG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~ 227 (547)
||.+.. .+.+.+++.. +. ...++++|||+|++|+|+|..|.++ +
T Consensus 158 ~g~~~~--~v~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~--------------g 201 (474)
T 1zmd_A 158 ITIDED--TIVSSTGALS-------------LK-------KVPEKMVVIGAGVIGVELGSVWQRL--------------G 201 (474)
T ss_dssp CCCCSS--SEECHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCCCcC--cEEcHHHHhh-------------cc-------ccCceEEEECCCHHHHHHHHHHHHc--------------C
Confidence 987542 1223333221 11 1235999999999999999999876 6
Q ss_pred ceEEEEecCCccCC-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e-EEEEe----ccCCeEEEEeeceEEEccC
Q 041537 228 VRITLIQSGDHILN-SFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E-ITMKI----KSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 228 ~~V~lv~~~~~il~-~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~-v~~~~----~~~G~~~~i~~D~vv~a~G 299 (547)
.+|+++++.++++| .+++++.+.+.+.|++.||+++++++|++++.+ . +.+.. ..+++ ++++|.||||+|
T Consensus 202 ~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~--~i~~D~vv~a~G 279 (474)
T 1zmd_A 202 ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAE--VITCDVLLVCIG 279 (474)
T ss_dssp CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCE--EEEESEEEECSC
T ss_pred CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCce--EEEcCEEEECcC
Confidence 89999999999999 899999999999999999999999999999743 3 55542 12344 499999999999
Q ss_pred CCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 300 VGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 300 ~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
. .|+...+ ++++++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 280 ~--~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 323 (474)
T 1zmd_A 280 R--RPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVA 323 (474)
T ss_dssp E--EECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSS
T ss_pred C--CcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCC
Confidence 5 4554332 455665 56789999999998 8999999999985
No 27
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.1e-36 Score=320.66 Aligned_cols=267 Identities=23% Similarity=0.308 Sum_probs=198.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhc---------------------cccCccccc---
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTC---------------------GTVEARSIA--- 83 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~---------------------g~~~~~~~~--- 83 (547)
.+||+|||||+||+++|..|++.|++|+|||+++.++++.......+ ...+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 47999999999999999999999999999998887765422111100 001111111
Q ss_pred ---------hhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc
Q 041537 84 ---------EPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC 154 (547)
Q Consensus 84 ---------~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~ 154 (547)
..+..+++..+ ++++.+++..+|+....|...+ |. ..++.||+||||||+.|..|++||.+ +
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~--v~~~~g~v~~id~~~~~V~~~~----g~-~~~~~~d~lviAtG~~p~~p~i~G~~-~- 154 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYET--LTFYKGYVKIKDPTHVIVKTDE----GK-EIEAETRYMIIASGAETAKLRLPGVE-Y- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--EEEESEEEEEEETTEEEEEETT----SC-EEEEEEEEEEECCCEEECCCCCTTGG-G-
T ss_pred HhheeccccchHHHHHHhCC--CEEEEeEEEEecCCeEEEEcCC----Cc-EEEEecCEEEECCCCCccCCCCCCcc-c-
Confidence 22233334444 8889999999997755555543 43 12399999999999999999999986 2
Q ss_pred cccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEe
Q 041537 155 HFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQ 234 (547)
Q Consensus 155 ~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~ 234 (547)
+.+.+++..+++. +. ...++++|||+|++|+|+|..|.++ +.+|++++
T Consensus 155 --~~t~~~~~~~~~~---------l~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~ 202 (466)
T 3l8k_A 155 --CLTSDDIFGYKTS---------FR-------KLPQDMVIIGAGYIGLEIASIFRLM--------------GVQTHIIE 202 (466)
T ss_dssp --SBCHHHHHSTTCS---------CC-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEC
T ss_pred --eEeHHHHHHHHHH---------Hh-------hCCCeEEEECCCHHHHHHHHHHHHc--------------CCEEEEEE
Confidence 4455554422111 11 2346999999999999999999876 68999999
Q ss_pred cCCccCCcc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC---CeEEEEecc-CCeEEEEeeceEEEccCCCCCcchHHH
Q 041537 235 SGDHILNSF-DERISSFAEKKFQRDGIEVLTECRVVNVSD---KEITMKIKS-TGAVCSIPHGLVLWSTGVGTRPAIKDF 309 (547)
Q Consensus 235 ~~~~il~~~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~~v~~~~~~-~G~~~~i~~D~vv~a~G~~~~p~~~~l 309 (547)
+.+++++.+ ++++.+.+.+.|+ |+++++++|++++. +.+.+.... +|+..++++|.||||+|. .|+.. |
T Consensus 203 ~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~--~p~~~-l 276 (466)
T 3l8k_A 203 MLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR--RPVIP-E 276 (466)
T ss_dssp SSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCE--EECCC-T
T ss_pred eCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC--Ccccc-c
Confidence 999999988 9999999988877 99999999999976 555554422 466445999999999995 45443 4
Q ss_pred -HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 310 -MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 310 -~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
++.+++ +.+| |.||+++|| +.|+|||+|||+.
T Consensus 277 ~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 277 GAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANG 311 (466)
T ss_dssp TTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTC
T ss_pred chhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCC
Confidence 455665 6778 999999999 9999999999986
No 28
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.2e-35 Score=316.34 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=197.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh----------------hh-ccc-------cCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS----------------VT-CGT-------VEA 79 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~----------------~~-~g~-------~~~ 79 (547)
+++|+|||||+||+++|..|++.|++|+|||+++.++++... |. .. .|. .+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 479999999999999999999999999999999776543211 00 00 010 011
Q ss_pred ccc-----------chhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCC
Q 041537 80 RSI-----------AEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTP 148 (547)
Q Consensus 80 ~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ip 148 (547)
..+ ...+..++++.+ ++++.+++..+++....|.+.+ |. ..++.||+||+|||+.|..|+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~~~~~v~~~~----G~-~~~~~~d~lviAtG~~p~~p~~~ 154 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNK--VTYYKGEGSFETAHSIRVNGLD----GK-QEMLETKKTIIATGSEPTELPFL 154 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEEEEETTEEEEEETT----SC-EEEEEEEEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCCEEEEEecC----Cc-eEEEEcCEEEECCCCCcCCCCCC
Confidence 111 112345556666 6778888888886544444332 31 23899999999999999999888
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc
Q 041537 149 GVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV 228 (547)
Q Consensus 149 G~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 228 (547)
|.+.. .+.+.+++..++ ...++++|||+|++|+|+|..+.++ +.
T Consensus 155 g~~~~--~v~t~~~~~~~~--------------------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~ 198 (468)
T 2qae_A 155 PFDEK--VVLSSTGALALP--------------------RVPKTMVVIGGGVIGLELGSVWARL--------------GA 198 (468)
T ss_dssp CCCSS--SEECHHHHHTCS--------------------SCCSEEEEECCSHHHHHHHHHHHHT--------------TC
T ss_pred CCCcC--ceechHHHhhcc--------------------cCCceEEEECCCHHHHHHHHHHHHh--------------CC
Confidence 87531 233444433211 1235999999999999999999876 68
Q ss_pred eEEEEecCCccCCcccHHHHHHHHHHH-HhCCcEEEcCceEEEEeCC--eEEEEec-cCCeEEEEeeceEEEccCCCCCc
Q 041537 229 RITLIQSGDHILNSFDERISSFAEKKF-QRDGIEVLTECRVVNVSDK--EITMKIK-STGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 229 ~V~lv~~~~~il~~~~~~~~~~~~~~l-~~~GV~v~~~~~V~~v~~~--~v~~~~~-~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
+|+++++.++++|.+++++.+.+.+.| ++.||+++++++|++++.+ .+.+... .+|+..++++|.||||+|. .|
T Consensus 199 ~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~--~p 276 (468)
T 2qae_A 199 EVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR--RP 276 (468)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE--EE
T ss_pred EEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc--cc
Confidence 999999999999999999999999999 9999999999999999753 3444321 1363345999999999995 44
Q ss_pred chHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 305 AIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 305 ~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+...+ ++.+++ +++|+|.||+++|| +.|+|||+|||+.
T Consensus 277 ~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 317 (468)
T 2qae_A 277 FTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVD 317 (468)
T ss_dssp CCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred CCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCC
Confidence 44332 456665 56789999999998 8999999999986
No 29
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.6e-35 Score=297.41 Aligned_cols=266 Identities=20% Similarity=0.301 Sum_probs=191.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC--CCCccCCChhhhhc-cccCccccchhHHHHHHhCCCcEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ--NYFAFTPLLPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEAE 103 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~--~~~~~~p~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 103 (547)
++++|+|||||+||+++|..|++.|++|+|||++ ..+.+.+..+.++. ......++...+...+.+.++++ +.++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~ 91 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPV--LLDI 91 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCE--EESC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE--EEEE
Confidence 3579999999999999999999999999999997 11111111111111 11223456666777788887554 4489
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcccc---ccccCCHHHHHHHHHHHHHHHHHccCC
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLEN---CHFLKELEDAQKIRRTVTDCFEKAVLP 180 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~---~~~~~~~~~a~~l~~~l~~~~~~~~~~ 180 (547)
|+.++++++.+.+.... +. ++.||+||+|||+.+..+++||..+. ........+
T Consensus 92 v~~i~~~~~~~~v~~~~--g~---~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~------------------ 148 (323)
T 3f8d_A 92 VEKIENRGDEFVVKTKR--KG---EFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD------------------ 148 (323)
T ss_dssp EEEEEEC--CEEEEESS--SC---EEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH------------------
T ss_pred EEEEEecCCEEEEEECC--CC---EEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC------------------
Confidence 99999886654443311 33 89999999999999999999997642 111111100
Q ss_pred CCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCc
Q 041537 181 GLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGI 260 (547)
Q Consensus 181 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV 260 (547)
......++++|||+|++|+|+|..|.+. +.+|+++++.+++++ ++. ...+.+++.||
T Consensus 149 ----~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~~~~~~~~gv 205 (323)
T 3f8d_A 149 ----APLFKNRVVAVIGGGDSALEGAEILSSY--------------STKVYLIHRRDTFKA--QPI---YVETVKKKPNV 205 (323)
T ss_dssp ----GGGGTTCEEEEECCSHHHHHHHHHHHHH--------------SSEEEEECSSSSCCS--CHH---HHHHHHTCTTE
T ss_pred ----HhHcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEeCCCCCc--CHH---HHHHHHhCCCc
Confidence 0113456999999999999999999886 579999999998876 222 22333344599
Q ss_pred EEEcCceEEEEeCC----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCC
Q 041537 261 EVLTECRVVNVSDK----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECEN 334 (547)
Q Consensus 261 ~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~ 334 (547)
++++++.|++++.+ .+++.+..+|+..++++|.||||+|+. |+. .+++.+++ +.+|+|.||+++++ +.|+
T Consensus 206 ~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~--p~~-~~~~~~g~~~~~~g~i~vd~~~~t-~~~~ 281 (323)
T 3f8d_A 206 EFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFD--PPT-DFAKSNGIETDTNGYIKVDEWMRT-SVPG 281 (323)
T ss_dssp EEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE--CCH-HHHHHTTCCBCTTSSBCCCTTCBC-SSTT
T ss_pred EEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCC--CCh-hHHhhcCeeecCCCcEecCCCcee-cCCC
Confidence 99999999999765 366665445765569999999999964 444 35566665 67899999999998 8999
Q ss_pred EEEeCccCcc
Q 041537 335 VYALGDCATI 344 (547)
Q Consensus 335 VfaiGD~a~~ 344 (547)
|||+|||+..
T Consensus 282 vya~GD~~~~ 291 (323)
T 3f8d_A 282 VFAAGDCTSA 291 (323)
T ss_dssp EEECSTTBST
T ss_pred EEEcceecCC
Confidence 9999999874
No 30
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.8e-36 Score=317.95 Aligned_cols=268 Identities=24% Similarity=0.373 Sum_probs=193.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh----------------hh-ccc-----cCccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS----------------VT-CGT-----VEARS 81 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~----------------~~-~g~-----~~~~~ 81 (547)
+++|+|||||+||+++|..|++.|++|+|||++ .++..... +. .. .+. .+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 479999999999999999999999999999998 33221110 00 00 000 00011
Q ss_pred -----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCc
Q 041537 82 -----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGV 150 (547)
Q Consensus 82 -----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~ 150 (547)
+...+.+.+++.+ ++++.++...++. +.+.+.... |. ..++.||+||+|||+.|..|+++|.
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~g--v~~~~g~~~~id~--~~v~V~~~~--G~-~~~~~~d~lViAtG~~~~~~~~~g~ 154 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNK--ITEIHGYGTFADA--NTLLVDLND--GG-TESVTFDNAIIATGSSTRLVPGTSL 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEESSS--SEEEEEETT--SC-CEEEEEEEEEECCCEEECCCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEEeCC--Cc-eEEEEcCEEEECCCCCCCCCCCCCC
Confidence 1111345566666 6667777665554 444443211 31 1379999999999999998888887
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 151 LENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 151 ~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
+.. +.+.+++..+ . ...++++|||||++|+|+|..|.++ +.+|
T Consensus 155 ~~~---~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~V 197 (464)
T 2a8x_A 155 SAN---VVTYEEQILS-------------R-------ELPKSIIIAGAGAIGMEFGYVLKNY--------------GVDV 197 (464)
T ss_dssp BTT---EECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEE
T ss_pred Cce---EEecHHHhhc-------------c-------ccCCeEEEECCcHHHHHHHHHHHHc--------------CCeE
Confidence 543 3344443221 1 1235999999999999999999876 6899
Q ss_pred EEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCCCCcchHH
Q 041537 231 TLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKD 308 (547)
Q Consensus 231 ~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~ 308 (547)
+++++.++++|.+++++.+.+.+.|+++||+++++++|++++.+ .+.+....+|+..++++|.||||+|. .|+...
T Consensus 198 tlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~--~p~~~~ 275 (464)
T 2a8x_A 198 TIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF--APNVEG 275 (464)
T ss_dssp EEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE--EECCSS
T ss_pred EEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC--CccCCC
Confidence 99999999999999999999999999999999999999999753 35444222364345999999999995 454433
Q ss_pred H-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 309 F-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 309 l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+ ++++++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 276 l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 312 (464)
T 2a8x_A 276 YGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNG 312 (464)
T ss_dssp SCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGC
T ss_pred CCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCC
Confidence 2 456665 56789999999998 8999999999985
No 31
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.3e-35 Score=316.06 Aligned_cols=274 Identities=20% Similarity=0.313 Sum_probs=194.9
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh--------------------h-ccc------
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV--------------------T-CGT------ 76 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~--------------------~-~g~------ 76 (547)
+.++++||+|||||+||+++|..|++.|++|+|||+++.++++...... . .|.
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 3455689999999999999999999999999999998877653211100 0 000
Q ss_pred cCccc-----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 77 VEARS-----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 77 ~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
.+... +...+...++..+ ++++.+++..+++. .+.+.... |. ..++.||+||||||+.| +
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~--~~~v~~~~--g~-~~~~~~d~lViATGs~p--~ 171 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNK--IDGFQGTGKVLGQG--KVSVTNEK--GE-EQVLEAKNVVIATGSDV--A 171 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECSSS--EEEEECTT--SC-EEEEECSEEEECCCEEC--C
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCC--EEEEEeCC--Cc-eEEEEeCEEEEccCCCC--C
Confidence 00000 1112334455666 78889888887765 44443211 32 34899999999999986 4
Q ss_pred CCCCccc--cccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCC
Q 041537 146 GTPGVLE--NCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPT 223 (547)
Q Consensus 146 ~ipG~~e--~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~ 223 (547)
.+||+.+ ....+.+..++.. +. ...++++|||+|++|+|+|..|.++
T Consensus 172 ~ipg~~~~~~~~~~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~----------- 220 (491)
T 3urh_A 172 GIPGVEVAFDEKTIVSSTGALA-------------LE-------KVPASMIVVGGGVIGLELGSVWARL----------- 220 (491)
T ss_dssp CBTTBCCCCCSSSEECHHHHTS-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHH-----------
T ss_pred CCCCcccccCCeeEEehhHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc-----------
Confidence 6777652 1112233322111 11 2346999999999999999999987
Q ss_pred CCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeE--EEEeccCCeEEEEeeceEEEccC
Q 041537 224 VKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEI--TMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 224 ~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v--~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+ .+.+..+|+..++++|.||+|+|
T Consensus 221 ---g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 221 ---GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp ---TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred ---CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 68999999999999999999999999999999999999999999964 343 34332235334599999999999
Q ss_pred CCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 300 VGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 300 ~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
. .|+...+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 298 ~--~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 341 (491)
T 3urh_A 298 R--KPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVR 341 (491)
T ss_dssp C--EECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred C--ccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 5 4555444 555665 67899999999999 9999999999985
No 32
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-35 Score=299.71 Aligned_cols=267 Identities=19% Similarity=0.199 Sum_probs=193.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh-------hhhhc-cccCccccchhHHHHHHhCCCcEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL-------PSVTC-GTVEARSIAEPVRNIIKKRNAEIQ 98 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l-------~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~ 98 (547)
++++|+|||||+||+++|..|++.|++|+|||+++.+++.... +.... ......++...+.+.+.+.++.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 3579999999999999999999899999999998876543210 11100 111223445556666777774442
Q ss_pred EEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCC---CccCCCCCCccccc-----cccCCHHHHHHHHHHH
Q 041537 99 FWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGA---QVNTFGTPGVLENC-----HFLKELEDAQKIRRTV 170 (547)
Q Consensus 99 ~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~---~~~~~~ipG~~e~~-----~~~~~~~~a~~l~~~l 170 (547)
...+|+.++.+...+.+.... +. ++.||+||+|+|+ .|..+++||..+.. ..+++.
T Consensus 84 -~~~~v~~i~~~~~~~~v~~~~--g~---~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~---------- 147 (335)
T 2zbw_A 84 -LGERAETLEREGDLFKVTTSQ--GN---AYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK---------- 147 (335)
T ss_dssp -ESCCEEEEEEETTEEEEEETT--SC---EEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG----------
T ss_pred -eCCEEEEEEECCCEEEEEECC--CC---EEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch----------
Confidence 466899998766544443211 33 7999999999999 57777888864321 011111
Q ss_pred HHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHH
Q 041537 171 TDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSF 250 (547)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~ 250 (547)
.....++++|||+|++|+|+|..|.+. +.+|+++++.+.+++. +...+.
T Consensus 148 ---------------~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~v~~~~~~~~~--~~~~~~ 196 (335)
T 2zbw_A 148 ---------------AEFQGKRVLIVGGGDSAVDWALNLLDT--------------ARRITLIHRRPQFRAH--EASVKE 196 (335)
T ss_dssp ---------------GGGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCCSC--HHHHHH
T ss_pred ---------------hhcCCCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEcCCccCcc--HHHHHH
Confidence 112456999999999999999998764 6799999999987664 567788
Q ss_pred HHHHHHhCCcEEEcCceEEEEeCC----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCC-CCccEEeCC
Q 041537 251 AEKKFQRDGIEVLTECRVVNVSDK----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQG-KRRVLATNE 325 (547)
Q Consensus 251 ~~~~l~~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~-~~g~i~Vd~ 325 (547)
+.+.+++.||++++++.|++++.+ .+.+....+|+..++++|.||||+|+. |+. .+++.+++. ++|+|.||+
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~--p~~-~~l~~~~~~~~~g~i~vd~ 273 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI--TKL-GPLANWGLALEKNKIKVDT 273 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE--EEC-GGGGGSCCCEETTEEECCT
T ss_pred HHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC--CCc-hHhhhcceeccCCeeeeCC
Confidence 888899999999999999999764 466654324754469999999999964 433 344555652 478999999
Q ss_pred CCCcCCCCCEEEeCccCcc
Q 041537 326 WLRVKECENVYALGDCATI 344 (547)
Q Consensus 326 ~l~~~~~~~VfaiGD~a~~ 344 (547)
++|+ +.|+|||+|||+..
T Consensus 274 ~~~t-~~~~vya~GD~~~~ 291 (335)
T 2zbw_A 274 TMAT-SIPGVYACGDIVTY 291 (335)
T ss_dssp TCBC-SSTTEEECSTTEEC
T ss_pred CCCC-CCCCEEEecccccc
Confidence 9998 89999999999875
No 33
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.6e-36 Score=316.03 Aligned_cols=267 Identities=20% Similarity=0.373 Sum_probs=193.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhh---------------h-ccc------cCccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSV---------------T-CGT------VEARS 81 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~---------------~-~g~------~~~~~ 81 (547)
+++|+|||||+||+++|..|++.|++|+|||++ .++.+.. .+.. . .|. .+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 478999999999999999999999999999998 3332211 0000 0 000 00111
Q ss_pred -----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCc
Q 041537 82 -----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGV 150 (547)
Q Consensus 82 -----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~ 150 (547)
+...+...+++.+ ++++.+++..+++....|.+.+ | ..++.||+||+|||++|..|+++|.
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~id~~~v~V~~~~----G--~~~i~~d~lViATGs~p~~~~~~g~ 153 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNK--VEIVKGEAYFVDANTVRVVNGD----S--AQTYTFKNAIIATGSRPIELPNFKF 153 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--CEEEESEEEEEETTEEEEEETT----E--EEEEECSEEEECCCEEECCBTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCCeEEEEeCC----C--cEEEEeCEEEEecCCCCCCCCCCCc
Confidence 1112344556666 7777888777876533443332 3 1379999999999999999988887
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 151 LENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 151 ~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
++. +.+..++..+ . ...++++|||+|++|+|+|..|.++ +.+|
T Consensus 154 ~~~---v~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~V 196 (455)
T 1ebd_A 154 SNR---ILDSTGALNL-------------G-------EVPKSLVVIGGGYIGIELGTAYANF--------------GTKV 196 (455)
T ss_dssp CSS---EECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEE
T ss_pred cce---EecHHHHhcc-------------c-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CCcE
Confidence 543 3344433221 1 1245999999999999999999876 6899
Q ss_pred EEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHH
Q 041537 231 TLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKD 308 (547)
Q Consensus 231 ~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~ 308 (547)
+++++.++++|.+++++.+.+.+.|++.||+++++++|++++. +.+.+....+|+..++++|.||||+|.. |+...
T Consensus 197 tlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~--p~~~~ 274 (455)
T 1ebd_A 197 TILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR--PNTDE 274 (455)
T ss_dssp EEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE--ESCSS
T ss_pred EEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC--cccCc
Confidence 9999999999999999999999999999999999999999964 3454442112333459999999999964 44432
Q ss_pred H-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 309 F-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 309 l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 275 l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 311 (455)
T 1ebd_A 275 LGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVP 311 (455)
T ss_dssp SSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred CChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCC
Confidence 2 345555 56789999999998 8999999999985
No 34
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=4.1e-35 Score=316.22 Aligned_cols=267 Identities=20% Similarity=0.305 Sum_probs=197.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhhh-------------------cccc-C---
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSVT-------------------CGTV-E--- 78 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~~-------------------~g~~-~--- 78 (547)
..+++|||||||++|+++|.+|++.|++|+|||+++.++.+.. .+... .... .
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 4468999999999999999999999999999999985543211 11000 0000 0
Q ss_pred -ccccchhH----H---HHH-----HhCCCcEEEE-EEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 79 -ARSIAEPV----R---NII-----KKRNAEIQFW-EAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 79 -~~~~~~~~----~---~~~-----~~~~~~v~~~-~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
..++...+ . .++ .+.+ ++++ .++++.+++ +.|.+. +. .+.||+||+|||+.|..
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g--v~~~~~~~v~~i~~--~~v~~~-----g~---~~~~d~lViATGs~p~~ 188 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLN--LEYILNCPAKVIDN--HTVEAA-----GK---VFKAKNLILAVGAGPGT 188 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSC--CCEEESSCCEEEET--TEEEET-----TE---EEEBSCEEECCCEECCC
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCC--cEEEEeeEEEEeeC--CEEEEC-----CE---EEEeCEEEECCCCCCCC
Confidence 11222222 2 444 5566 5566 788888986 567664 22 79999999999999999
Q ss_pred CCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCC
Q 041537 145 FGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTV 224 (547)
Q Consensus 145 ~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~ 224 (547)
|++||..... +.+.+++. +. +.. ...++++|||+|++|+|+|..+.++
T Consensus 189 p~i~G~~~~~--v~~~~~~~---~~---------l~~------~~g~~vvViGgG~~g~E~A~~l~~~------------ 236 (523)
T 1mo9_A 189 LDVPGVNAKG--VFDHATLV---EE---------LDY------EPGSTVVVVGGSKTAVEYGCFFNAT------------ 236 (523)
T ss_dssp CCSTTTTSBT--EEEHHHHH---HH---------CCS------CCCSEEEEECCSHHHHHHHHHHHHT------------
T ss_pred CCCCCcccCc--EeeHHHHH---HH---------HHh------cCCCeEEEECCCHHHHHHHHHHHHc------------
Confidence 9999975421 12333322 00 111 1126999999999999999999876
Q ss_pred CCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce----EEEEeccCCeEEEEeeceEEEcc
Q 041537 225 KDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KE----ITMKIKSTGAVCSIPHGLVLWST 298 (547)
Q Consensus 225 ~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~----v~~~~~~~G~~~~i~~D~vv~a~ 298 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+.. .+|+ .++++|.||+|+
T Consensus 237 --G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv~A~ 312 (523)
T 1mo9_A 237 --GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVFLGL 312 (523)
T ss_dssp --TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEEECC
T ss_pred --CCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEEECc
Confidence 68999999999999999999999999999999999999999999974 44 44443 3464 249999999999
Q ss_pred CCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 299 GVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 299 G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
|.+ |+...+++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 313 G~~--p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 356 (523)
T 1mo9_A 313 GEQ--PRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIG 356 (523)
T ss_dssp CCE--ECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGC
T ss_pred CCc--cCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCC
Confidence 964 444215566666 56899999999999 8999999999985
No 35
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=8.8e-35 Score=309.65 Aligned_cols=265 Identities=18% Similarity=0.266 Sum_probs=193.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----------------------hhh---hhc--cccCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----------------------LPS---VTC--GTVEA 79 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----------------------l~~---~~~--g~~~~ 79 (547)
.+++|||||||+||+++|.+|++.|++|+|||++. ++.+.. .+. +.. ...+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 35799999999999999999999999999999983 322110 000 000 00011
Q ss_pred cccch-------h-----HHHHHHhC-CCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 80 RSIAE-------P-----VRNIIKKR-NAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 80 ~~~~~-------~-----~~~~~~~~-~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
..+.. . +..++++. + ++++.+++..++.....|.+.+ |. ...+.||+||||||++|+.|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~----g~-~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPA--ITVVHGEARFKDDQSLTVRLNE----GG-ERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTT--EEEEEEEEEEEETTEEEEEETT----SS-EEEEECSEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCC--eEEEEEEEEEccCCEEEEEeCC----Cc-eEEEEeCEEEEeCCCCCCCCC
Confidence 11111 1 12334444 5 8888999999997644554433 31 237999999999999999999
Q ss_pred CCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCC
Q 041537 147 TPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKD 226 (547)
Q Consensus 147 ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~ 226 (547)
+||.++. .+.+.+++..+ . ...++++|||+|++|+|+|..+.++
T Consensus 155 i~G~~~~--~~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~-------------- 198 (467)
T 1zk7_A 155 IPGLKES--PYWTSTEALAS-------------D-------TIPERLAVIGSSVVALELAQAFARL-------------- 198 (467)
T ss_dssp CTTTTTS--CCBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCCCcC--ceecHHHHhcc-------------c-------ccCCEEEEECCCHHHHHHHHHHHHc--------------
Confidence 9998542 12344433221 0 1245999999999999999999876
Q ss_pred CceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCc
Q 041537 227 LVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 227 ~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
+.+|+++++.++++| +++++.+.+.+.|++.||+++++++|++++. +.+.+.. + +.+ +++|.||||+|. .|
T Consensus 199 g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~-~~~--i~aD~Vv~a~G~--~p 271 (467)
T 1zk7_A 199 GSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTT-T-HGE--LRADKLLVATGR--TP 271 (467)
T ss_dssp TCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEE-T-TEE--EEESEEEECSCE--EE
T ss_pred CCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-C-CcE--EEcCEEEECCCC--Cc
Confidence 689999999999999 9999999999999999999999999999964 3333333 2 443 999999999995 45
Q ss_pred chHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 305 AIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 305 ~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+...+ ++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 272 ~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 312 (467)
T 1zk7_A 272 NTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTD 312 (467)
T ss_dssp SCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBS
T ss_pred CCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 54332 345565 56789999999998 8999999999986
No 36
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-35 Score=315.76 Aligned_cols=271 Identities=18% Similarity=0.305 Sum_probs=196.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh--------------------h-ccc------cCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV--------------------T-CGT------VEA 79 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~--------------------~-~g~------~~~ 79 (547)
.+++|+|||||+||+++|..|++.|++|+|||+++.++++...... . .|. .+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4689999999999999999999889999999999776543211100 0 000 011
Q ss_pred ccc-----------chhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCC
Q 041537 80 RSI-----------AEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTP 148 (547)
Q Consensus 80 ~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ip 148 (547)
..+ ...+...+++.+ ++++.+++..++.. .+.+.... |. ..++.||+||+|||+.|..|+++
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~--~~~v~~~~--G~-~~~i~~d~lIiAtGs~p~~p~~~ 157 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNK--VTYVKGYGKFVSPS--EISVDTIE--GE-NTVVKGKHIIIATGSDVKSLPGV 157 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEEEETT--EEEECCSS--SC-CEEEECSEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCC--EEEEEeCC--Cc-eEEEEcCEEEECCCCCCCCCCCC
Confidence 111 111234555566 66777777777754 45443211 31 13799999999999999999888
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc
Q 041537 149 GVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV 228 (547)
Q Consensus 149 G~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 228 (547)
|.+.. .+.+..++.. +. ...++++|||||++|+|+|..|.++ +.
T Consensus 158 g~~~~--~v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~ 201 (470)
T 1dxl_A 158 TIDEK--KIVSSTGALA-------------LS-------EIPKKLVVIGAGYIGLEMGSVWGRI--------------GS 201 (470)
T ss_dssp CCCSS--SEECHHHHTT-------------CS-------SCCSEEEESCCSHHHHHHHHHHHHH--------------TC
T ss_pred CCCcc--cEEeHHHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc--------------CC
Confidence 87531 1233333221 11 1246999999999999999999886 68
Q ss_pred eEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCe--EEEEe--ccCCeEEEEeeceEEEccCCCCCc
Q 041537 229 RITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKE--ITMKI--KSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 229 ~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~--v~~~~--~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
+|+++++.++++|.+++++.+.+.+.|++.||+++++++|++++.+. +.+.. ..+|+..++++|.||||+|. .|
T Consensus 202 ~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p 279 (470)
T 1dxl_A 202 EVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR--TP 279 (470)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCE--EE
T ss_pred cEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCC--Cc
Confidence 99999999999999999999999999999999999999999997643 44332 11353235999999999995 44
Q ss_pred chHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 305 AIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 305 ~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 280 ~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 280 FTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIP 320 (470)
T ss_dssp CCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSS
T ss_pred CCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCC
Confidence 44332 345555 56789999999998 8999999999985
No 37
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=6.9e-35 Score=313.99 Aligned_cols=272 Identities=17% Similarity=0.256 Sum_probs=193.4
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC--------CCccCCCh----hh---------------h-hcc
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN--------YFAFTPLL----PS---------------V-TCG 75 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~--------~~~~~p~l----~~---------------~-~~g 75 (547)
+.+..+||+|||||+||+++|..|++.|++|+|||+++ .++++.+. |. . ..|
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 33456899999999999999999999999999999864 23332111 00 0 000
Q ss_pred -------ccCccccch-----------hHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEc
Q 041537 76 -------TVEARSIAE-----------PVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIA 137 (547)
Q Consensus 76 -------~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViA 137 (547)
..+...+.. .++..++..+ ++++.+++..+++....|...+ |+ .+++.||+||||
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~g--V~~i~g~a~~~d~~~v~v~~~~----g~-~~~i~~d~lViA 180 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKK--VVYENAYGQFIGPHRIKATNNK----GK-EKIYSAERFLIA 180 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTEEEEECTT----CC-CCEEEEEEEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCCEEEEEcCC----CC-EEEEECCEEEEE
Confidence 111111111 1223455565 8889999999997744443322 22 247999999999
Q ss_pred cCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhh
Q 041537 138 VGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDL 217 (547)
Q Consensus 138 tG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~ 217 (547)
||++|..|++||..++. .+.+++.. +. ...++++|||+|++|+|+|..|.++
T Consensus 181 TGs~p~~p~i~G~~~~~---~t~~~~~~-------------l~-------~~~~~vvVIGgG~ig~E~A~~l~~~----- 232 (519)
T 3qfa_A 181 TGERPRYLGIPGDKEYC---ISSDDLFS-------------LP-------YCPGKTLVVGASYVALECAGFLAGI----- 232 (519)
T ss_dssp CCEEECCCCCTTHHHHC---BCHHHHTT-------------CS-------SCCCSEEEECCSHHHHHHHHHHHHT-----
T ss_pred CCCCcCCCCCCCccCce---EcHHHHhh-------------hh-------hcCCeEEEECCcHHHHHHHHHHHHc-----
Confidence 99999999999975542 22222211 11 2234899999999999999999986
Q ss_pred hhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC------CeEEE--EeccCCeEEEE
Q 041537 218 INLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD------KEITM--KIKSTGAVCSI 289 (547)
Q Consensus 218 ~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~------~~v~~--~~~~~G~~~~i 289 (547)
+.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.+++++. +.+.+ ...+.++..++
T Consensus 233 ---------G~~Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~ 302 (519)
T 3qfa_A 233 ---------GLDVTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEG 302 (519)
T ss_dssp ---------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEE
T ss_pred ---------CCeEEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEE
Confidence 679999998 4789999999999999999999999999988777642 33333 33222333458
Q ss_pred eeceEEEccCCCCCcchHHH-HHHhCC--C-CCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 290 PHGLVLWSTGVGTRPAIKDF-MEQIGQ--G-KRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 290 ~~D~vv~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
++|.||||+|. .|++..+ ++.+++ + .+|+|.||+++|| +.|+|||+|||+.
T Consensus 303 ~~D~vi~a~G~--~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~ 357 (519)
T 3qfa_A 303 EYNTVMLAIGR--DACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILE 357 (519)
T ss_dssp EESEEEECSCE--EESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred ECCEEEEecCC--cccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccC
Confidence 99999999995 5555333 445555 4 5789999999998 9999999999984
No 38
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=4.8e-35 Score=310.04 Aligned_cols=259 Identities=20% Similarity=0.333 Sum_probs=195.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhh-----------hh------cc------ccCcc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPS-----------VT------CG------TVEAR 80 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~-----------~~------~g------~~~~~ 80 (547)
++||+|||||+||+++|..|++.|++|+|||++. ++.+.. .|. .. .+ ..+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 5799999999999999999999999999999974 332211 000 00 00 00001
Q ss_pred c-----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCC
Q 041537 81 S-----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPG 149 (547)
Q Consensus 81 ~-----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG 149 (547)
. +...++..+...+ ++++.++++.+++ +.|.+ + +. ++.||+||||||++|..|++||
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~~-~----g~---~~~~d~lviAtGs~p~~p~i~g 150 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNN--VDVIKGFARFVDA--KTLEV-N----GE---TITADHILIATGGRPSHPDIPG 150 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCEEEET--TEEEE-T----TE---EEEEEEEEECCCEEECCCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CEEEE-C----CE---EEEeCEEEECCCCCCCCCCCCC
Confidence 1 1112234445666 7788888888875 46776 3 43 7999999999999999999998
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce
Q 041537 150 VLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR 229 (547)
Q Consensus 150 ~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 229 (547)
. ++ +.+.+++..+ . ...++++|||||++|+|+|..|.++ +.+
T Consensus 151 ~-~~---~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~ 192 (450)
T 1ges_A 151 V-EY---GIDSDGFFAL-------------P-------ALPERVAVVGAGYIGVELGGVINGL--------------GAK 192 (450)
T ss_dssp G-GG---SBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCE
T ss_pred c-cc---eecHHHhhhh-------------h-------hcCCeEEEECCCHHHHHHHHHHHhc--------------CCE
Confidence 7 33 2333333221 1 1245999999999999999999876 689
Q ss_pred EEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e-EEEEeccCCeEEEEeeceEEEccCCCCCcch
Q 041537 230 ITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 230 V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|+. +++|.||||+|. .|++
T Consensus 193 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~--i~~D~vv~a~G~--~p~~ 267 (450)
T 1ges_A 193 THLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLEL-EDGRS--ETVDCLIWAIGR--EPAN 267 (450)
T ss_dssp EEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEESEEEECSCE--EESC
T ss_pred EEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEE-CCCcE--EEcCEEEECCCC--CcCC
Confidence 999999999999999999999999999999999999999999743 2 44443 35764 999999999995 5555
Q ss_pred HHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+.| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 268 ~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~ 306 (450)
T 1ges_A 268 DNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTG 306 (450)
T ss_dssp TTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGT
T ss_pred CCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCC
Confidence 444 556665 56899999999998 8999999999975
No 39
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-35 Score=312.88 Aligned_cols=266 Identities=18% Similarity=0.301 Sum_probs=195.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhh-----------hh-----cc----------
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPS-----------VT-----CG---------- 75 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~-----------~~-----~g---------- 75 (547)
+.++||+|||||+||+++|..|++.|++|+|||++. ++.+.. .|. .. .+
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 87 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKE 87 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGG
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccc
Confidence 346899999999999999999999999999999974 332211 000 00 00
Q ss_pred --ccCccccc-----------hhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCc
Q 041537 76 --TVEARSIA-----------EPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQV 142 (547)
Q Consensus 76 --~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~ 142 (547)
..+...+. ..++..++..+ ++++.+++..+++....|.+.+ |. ..++.||+||||||+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~v~~~~----g~-~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 88 HLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEK--VDVVFGWARFNKDGNVEVQKRD----NT-TEVYSANHILVATGGKA 160 (479)
T ss_dssp GCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEEEEEEEECTTSCEEEEESS----SC-CEEEEEEEEEECCCEEE
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeCCEEEEEeCC----Cc-EEEEEeCEEEEcCCCCC
Confidence 00111111 12334455666 8888888888876544444432 31 23799999999999999
Q ss_pred cCC-CCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhC
Q 041537 143 NTF-GTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLY 221 (547)
Q Consensus 143 ~~~-~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~ 221 (547)
..| ++||.+ ++ .+.++...+ . ...++++|||||++|+|+|..|.++
T Consensus 161 ~~p~~i~g~~-~~---~~~~~~~~l-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~--------- 207 (479)
T 2hqm_A 161 IFPENIPGFE-LG---TDSDGFFRL-------------E-------EQPKKVVVVGAGYIGIELAGVFHGL--------- 207 (479)
T ss_dssp CCCTTSTTGG-GS---BCHHHHHHC-------------S-------SCCSEEEEECSSHHHHHHHHHHHHT---------
T ss_pred CCCCCCCCcc-cc---cchHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHc---------
Confidence 998 899873 32 233332221 1 2345999999999999999999876
Q ss_pred CCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e--EEEEeccCCeEEEEeeceEEEc
Q 041537 222 PTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E--ITMKIKSTGAVCSIPHGLVLWS 297 (547)
Q Consensus 222 ~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~--v~~~~~~~G~~~~i~~D~vv~a 297 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|+ .++++|.||||
T Consensus 208 -----g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~-~~G~-~~i~~D~vv~a 280 (479)
T 2hqm_A 208 -----GSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM-NDSK-SIDDVDELIWT 280 (479)
T ss_dssp -----TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE-TTSC-EEEEESEEEEC
T ss_pred -----CCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE-CCCc-EEEEcCEEEEC
Confidence 689999999999999999999999999999999999999999999642 3 44443 3572 24999999999
Q ss_pred cCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 298 TGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 298 ~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+|. .|++ .| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 281 ~G~--~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 325 (479)
T 2hqm_A 281 IGR--KSHL-GMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVG 325 (479)
T ss_dssp SCE--EECC-CSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTT
T ss_pred CCC--CCcc-ccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCC
Confidence 995 4554 45 456665 56789999999998 8999999999964
No 40
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4e-35 Score=311.88 Aligned_cols=263 Identities=20% Similarity=0.319 Sum_probs=192.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhh---------------h-ccc-----cCcccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSV---------------T-CGT-----VEARSI 82 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~---------------~-~g~-----~~~~~~ 82 (547)
+++|||||||+||+++|..|++.|++|+|||+++ ++.+.. .|.. . .|. .+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 5799999999999999999999999999999987 332110 0100 0 010 111111
Q ss_pred ch-----------hHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC-CCCc
Q 041537 83 AE-----------PVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG-TPGV 150 (547)
Q Consensus 83 ~~-----------~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~-ipG~ 150 (547)
.. .+..++++.+ ++++.+++..++. ++|.+. |. ++.||+||||||++|..|+ +|+
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~-----g~---~~~~d~lViATGs~p~~p~gi~~- 151 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNG--VELLRGFARLVGP--KEVEVG-----GE---RYGAKSLILATGSEPLELKGFPF- 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEET-----TE---EEEEEEEEECCCEEECCBTTBCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEccC--CEEEEc-----cE---EEEeCEEEEcCCCCCCCCCCCCC-
Confidence 11 1234556666 7778888777774 577664 22 7999999999999998775 766
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 151 LENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 151 ~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
.++ +.+.+++.++++ ...++++|||||++|+|+|..|.++ +.+|
T Consensus 152 ~~~---v~~~~~~~~l~~-------------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~V 195 (464)
T 2eq6_A 152 GED---VWDSTRALKVEE-------------------GLPKRLLVIGGGAVGLELGQVYRRL--------------GAEV 195 (464)
T ss_dssp SSS---EECHHHHTCGGG-------------------CCCSEEEEECCSHHHHHHHHHHHHT--------------TCEE
T ss_pred CCc---EEcHHHHHhhhh-------------------hcCCEEEEECCCHHHHHHHHHHHHC--------------CCeE
Confidence 222 234444332211 0235999999999999999999875 6899
Q ss_pred EEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccC--CeEEEEeeceEEEccCCCCCcch
Q 041537 231 TLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKST--GAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 231 ~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~--G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
+++++.++++|.+++++.+.+.+.|++.||+++++++|++++. +.+.+....+ |+..++++|.||+|+|. .|+.
T Consensus 196 tlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~--~p~~ 273 (464)
T 2eq6_A 196 TLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR--KPRT 273 (464)
T ss_dssp EEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE--EESC
T ss_pred EEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc--ccCC
Confidence 9999999999999999999999999999999999999999964 3444432213 65335999999999995 4555
Q ss_pred HHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
..+ ++.+++ +++|+|.||+++|| +.|+|||+|||+.
T Consensus 274 ~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 274 EGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAAR 312 (464)
T ss_dssp TTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTC
T ss_pred CCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 333 455665 56889999999998 8999999999985
No 41
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=7.3e-35 Score=311.39 Aligned_cols=267 Identities=18% Similarity=0.255 Sum_probs=192.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh---------------hh-cc------ccCccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS---------------VT-CG------TVEARS 81 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~---------------~~-~g------~~~~~~ 81 (547)
.++|+|||||+||+++|..|++.|++|+|||+++.++.+.+. +. .. .| ..+...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 479999999999999999999999999999997765432111 00 00 01 011111
Q ss_pred cch-----------hHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCC---------CceeeeecCEEEEccCCC
Q 041537 82 IAE-----------PVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKE---------TRDFSLEYDYLIIAVGAQ 141 (547)
Q Consensus 82 ~~~-----------~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g---------~~~~~i~yD~LViAtG~~ 141 (547)
+.. .+..+++..+ ++++.+++..++. +.+.+.... | ....++.||+||+|||+.
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~~~~--g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRK--VDVIQGDGQFLDP--HHLEVSLTA--GDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEEEEEEET--TEEEEEEEE--EEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--cEEEeeEEEEccC--CEEEEEecC--CcccccccccCcceEEEcCEEEECCCCC
Confidence 111 1334556666 6777777776664 455443100 2 001379999999999999
Q ss_pred ccCCC-CCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhh
Q 041537 142 VNTFG-TPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINL 220 (547)
Q Consensus 142 ~~~~~-ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~ 220 (547)
|..|+ +| .+. .+.+.+++..+ . ...++++|||||++|+|+|..|.++
T Consensus 160 p~~~~~i~-~~~---~v~~~~~~~~~-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~-------- 207 (482)
T 1ojt_A 160 VTKLPFIP-EDP---RIIDSSGALAL-------------K-------EVPGKLLIIGGGIIGLEMGTVYSTL-------- 207 (482)
T ss_dssp ECCCSSCC-CCT---TEECHHHHTTC-------------C-------CCCSEEEEESCSHHHHHHHHHHHHH--------
T ss_pred CCCCCCCC-ccC---cEEcHHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHc--------
Confidence 98776 55 322 23344443221 1 1246999999999999999999987
Q ss_pred CCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--eEEEEecc--C-CeEEEEeeceEE
Q 041537 221 YPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--EITMKIKS--T-GAVCSIPHGLVL 295 (547)
Q Consensus 221 ~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~v~~~~~~--~-G~~~~i~~D~vv 295 (547)
+.+|+++++.++++|.+++++.+.+.+.|++.||+++++++|++++.+ .+.+...+ + |+. +++|.||
T Consensus 208 ------G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~--~~~D~vv 279 (482)
T 1ojt_A 208 ------GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP--QRYDAVL 279 (482)
T ss_dssp ------TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC--EEESCEE
T ss_pred ------CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE--EEcCEEE
Confidence 689999999999999999999999999999999999999999999643 33333211 1 444 8999999
Q ss_pred EccCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 296 WSTGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 296 ~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
||+|. .|+++.+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 280 ~a~G~--~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 280 VAAGR--APNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVG 327 (482)
T ss_dssp ECCCE--EECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTC
T ss_pred ECcCC--CcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccC
Confidence 99995 5665443 466666 56789999999998 8999999999985
No 42
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.6e-35 Score=299.57 Aligned_cols=273 Identities=15% Similarity=0.188 Sum_probs=191.7
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC----CCccCCC----hhhhh--ccccCccccchhHHHHHHhC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN----YFAFTPL----LPSVT--CGTVEARSIAEPVRNIIKKR 93 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~----~~~~~p~----l~~~~--~g~~~~~~~~~~~~~~~~~~ 93 (547)
+..++++|+|||||++||++|..|++.|++|+|||+++ ..+.... ...++ .......++...+...+.+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 34456899999999999999999999999999999965 2221110 00010 01122345666777888888
Q ss_pred CCcEEEEEEEEEEEECCCCEEEEecCCC-CCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHH
Q 041537 94 NAEIQFWEAEAIKIDAAKNEVFCKSNID-KETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVT 171 (547)
Q Consensus 94 ~~~v~~~~~~v~~id~~~~~v~~~~~~~-~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~ 171 (547)
+ ++++.++|+.++++.+.+.+..... ++ ..+.||+||+|+|+.+..|.+||..+.. ..+.... .....
T Consensus 98 g--v~i~~~~v~~i~~~~~~~~v~~~~~~~~---~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-- 167 (338)
T 3itj_A 98 G--TEIITETVSKVDLSSKPFKLWTEFNEDA---EPVTTDAIILATGASAKRMHLPGEETYWQKGISACA---VCDGA-- 167 (338)
T ss_dssp T--CEEECSCEEEEECSSSSEEEEETTCSSS---CCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCH---HHHTT--
T ss_pred C--CEEEEeEEEEEEEcCCEEEEEEEecCCC---cEEEeCEEEECcCCCcCCCCCCCchhccCccEEEch---hcccc--
Confidence 7 5666677999999888776643110 13 3799999999999999999999975321 0111110 00000
Q ss_pred HHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHH
Q 041537 172 DCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFA 251 (547)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 251 (547)
......++++|||+|++|+|+|..|.++ +.+|+++++.+.+++ .+.+
T Consensus 168 -------------~~~~~~~~v~vvG~G~~g~e~a~~l~~~--------------g~~v~~v~~~~~~~~------~~~~ 214 (338)
T 3itj_A 168 -------------VPIFRNKPLAVIGGGDSACEEAQFLTKY--------------GSKVFMLVRKDHLRA------STIM 214 (338)
T ss_dssp -------------SGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS------CHHH
T ss_pred -------------hhhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCccCC------CHHH
Confidence 0013457999999999999999999865 679999999998766 2344
Q ss_pred HHHHHhC-CcEEEcCceEEEEeCCe-----EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH-HhCCCCCccEEe-
Q 041537 252 EKKFQRD-GIEVLTECRVVNVSDKE-----ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME-QIGQGKRRVLAT- 323 (547)
Q Consensus 252 ~~~l~~~-GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~-~~~~~~~g~i~V- 323 (547)
.+.+.+. ||++++++.|++++.+. +++.+..+|+..+++||.||||+|+.++. .++. .+.++.+|++.|
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~v~ 291 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPAT---KIVAGQVDTDEAGYIKTV 291 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECC---GGGBTTBCBCTTSCBCCC
T ss_pred HHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCCh---hHhhCceEecCCCcEEEc
Confidence 5566665 99999999999997653 66666445655569999999999965443 2322 233467899985
Q ss_pred CCCCCcCCCCCEEEeCccCc
Q 041537 324 NEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 324 d~~l~~~~~~~VfaiGD~a~ 343 (547)
|.++++ +.|+|||+|||+.
T Consensus 292 ~~~~~t-~~~~vya~GD~~~ 310 (338)
T 3itj_A 292 PGSSLT-SVPGFFAAGDVQD 310 (338)
T ss_dssp TTSSBC-SSTTEEECGGGGC
T ss_pred Cccccc-CCCCEEEeeccCC
Confidence 778887 8999999999986
No 43
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.8e-34 Score=292.35 Aligned_cols=263 Identities=14% Similarity=0.156 Sum_probs=186.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hhhh--ccccCccccchhHHHHHHhCCCcEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PSVT--CGTVEARSIAEPVRNIIKKRNAEIQFW 100 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~~~--~g~~~~~~~~~~~~~~~~~~~~~v~~~ 100 (547)
.+++|+|||||+||+++|..|++.|++|+|||++. .+..... ..++ .......++...+...+++.+ ++++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--v~~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFG--AKVE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTT--CEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcC--CEEE
Confidence 46799999999999999999999999999999983 3221110 0111 001223345566777777887 5566
Q ss_pred EEEEEEEECC--CC---EEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHH
Q 041537 101 EAEAIKIDAA--KN---EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCF 174 (547)
Q Consensus 101 ~~~v~~id~~--~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~ 174 (547)
.++|+.++++ ++ .|.+.+ |. ++.||+||+|+|+.+..|++||..+.. ..+..... .+
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~----g~---~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~----~~------ 146 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGY----NG---EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCAT----CD------ 146 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEES----SC---EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH----HH------
T ss_pred eeeEEEEEeccCCCceEEEEECC----CC---EEEeCEEEECcCCCcCCCCCCChhhccCceEEEecc----CC------
Confidence 6899999876 43 565554 43 899999999999999999999875421 01111110 00
Q ss_pred HHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHH
Q 041537 175 EKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKK 254 (547)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~ 254 (547)
. .....++++|||+|++|+|+|..|.+. +.+|+++++.+.+.. ++.+ .+.
T Consensus 147 -~---------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~----~~~ 196 (325)
T 2q7v_A 147 -G---------FFYKGKKVVVIGGGDAAVEEGMFLTKF--------------ADEVTVIHRRDTLRA--NKVA----QAR 196 (325)
T ss_dssp -G---------GGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCS--CHHH----HHH
T ss_pred -H---------HHcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeCCCcCCc--chHH----HHH
Confidence 0 012346999999999999999998764 679999999987643 3332 334
Q ss_pred HH-hCCcEEEcCceEEEEeCC----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHH-hCCCCCccEEeCCCCC
Q 041537 255 FQ-RDGIEVLTECRVVNVSDK----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQ-IGQGKRRVLATNEWLR 328 (547)
Q Consensus 255 l~-~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~-~~~~~~g~i~Vd~~l~ 328 (547)
+. +.||+++++++|+++..+ .+.+.+..+|+..++++|.||||+|+.++ . .++.. +.++.+|+|.||+++|
T Consensus 197 l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~--~-~~l~~~~~~~~~g~i~vd~~~~ 273 (325)
T 2q7v_A 197 AFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN--T-AFVKDTVSLRDDGYVDVRDEIY 273 (325)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEES--C-GGGTTTSCBCTTSCBCCBTTTB
T ss_pred HHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC--h-HHHhhhcccCCCccEecCCCCc
Confidence 44 469999999999999764 45665433576556999999999996544 3 23333 3346788999999999
Q ss_pred cCCCCCEEEeCccCc
Q 041537 329 VKECENVYALGDCAT 343 (547)
Q Consensus 329 ~~~~~~VfaiGD~a~ 343 (547)
+ +.|+|||+|||+.
T Consensus 274 t-~~~~vya~GD~~~ 287 (325)
T 2q7v_A 274 T-NIPMLFAAGDVSD 287 (325)
T ss_dssp C-SSTTEEECSTTTC
T ss_pred c-CCCCEEEeecccC
Confidence 8 8999999999986
No 44
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.4e-34 Score=309.45 Aligned_cols=272 Identities=20% Similarity=0.336 Sum_probs=197.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCC-CCCeEEEEc--------CCCCCccCCCh----hh---------------hh-cc--
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVS--------PQNYFAFTPLL----PS---------------VT-CG-- 75 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid--------~~~~~~~~p~l----~~---------------~~-~g-- 75 (547)
.++||+|||||+||+++|.+|++ .|++|+||| +++.++++... |. .. .|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 35799999999999999999999 999999999 24444433211 10 00 00
Q ss_pred ------ccCccccc-----------hhHHHHHHhC-CCcEEEEEEEEEEEECCCCEEEEecCC-CCCCceeeeecCEEEE
Q 041537 76 ------TVEARSIA-----------EPVRNIIKKR-NAEIQFWEAEAIKIDAAKNEVFCKSNI-DKETRDFSLEYDYLII 136 (547)
Q Consensus 76 ------~~~~~~~~-----------~~~~~~~~~~-~~~v~~~~~~v~~id~~~~~v~~~~~~-~~g~~~~~i~yD~LVi 136 (547)
..+...+. ..+...+++. + ++++.++++.+++ +++.+.... .+|.....+.||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lvi 157 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEG--LTFHQGFGALQDN--HTVLVRESADPNSAVLETLDTEYILL 157 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTT--EEEEESEEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeEEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEE
Confidence 01111111 1233344555 6 8889999999985 467764200 0031013899999999
Q ss_pred ccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHh
Q 041537 137 AVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQED 216 (547)
Q Consensus 137 AtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~ 216 (547)
|||++|..|++||. +++ .+.+++.. +. ...++++|||+|++|+|+|..|.++.
T Consensus 158 AtGs~p~~p~i~g~-~~~---~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~~--- 210 (490)
T 1fec_A 158 ATGSWPQHLGIEGD-DLC---ITSNEAFY-------------LD-------EAPKRALCVGGGYISIEFAGIFNAYK--- 210 (490)
T ss_dssp CCCEEECCCCSBTG-GGC---BCHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHHHS---
T ss_pred eCCCCCCCCCCCCc-cce---ecHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHhhc---
Confidence 99999999999987 332 23333221 11 12459999999999999999998762
Q ss_pred hhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC---eEEEEeccCCeEEEEeece
Q 041537 217 LINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK---EITMKIKSTGAVCSIPHGL 293 (547)
Q Consensus 217 ~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~i~~D~ 293 (547)
.++.+|+++++.++++|.+++++.+.+.+.|++.||+++++++|++++.+ .+.+.. .+|+. +++|.
T Consensus 211 --------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D~ 279 (490)
T 1fec_A 211 --------ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF-ESGAE--ADYDV 279 (490)
T ss_dssp --------CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE-TTSCE--EEESE
T ss_pred --------cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE-CCCcE--EEcCE
Confidence 12689999999999999999999999999999999999999999999743 244443 45764 99999
Q ss_pred EEEccCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 294 VLWSTGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 294 vv~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
||||+|. .|+...| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 280 vv~a~G~--~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~ 329 (490)
T 1fec_A 280 VMLAIGR--VPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD 329 (490)
T ss_dssp EEECSCE--EESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEEccCC--CcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 9999995 5555434 456665 56889999999998 8999999999985
No 45
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.5e-35 Score=291.08 Aligned_cols=256 Identities=16% Similarity=0.190 Sum_probs=187.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC-Chhhhhc-cccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP-LLPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p-~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
+++|+|||||++|+++|..|++.|++|+|||+++.....+ ..+.+.. ......++...+.+.+.+.+ .++++.++|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~ 80 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYP-TIHWVEGRVT 80 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCT-TEEEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcC-CeEEEEeEEE
Confidence 4799999999999999999999999999999876433222 2222222 22344556666777777663 3788889999
Q ss_pred EEECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcccccc-ccCCHHHHHHHHHHHHHHHHHccCCCC
Q 041537 106 KIDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCH-FLKELEDAQKIRRTVTDCFEKAVLPGL 182 (547)
Q Consensus 106 ~id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~ 182 (547)
.+++++.. |.+.+ +. ++.||+||+|||+.++.|.+||..+... .+.... ..+
T Consensus 81 ~i~~~~~~~~v~~~~----g~---~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~--------~~~---------- 135 (297)
T 3fbs_A 81 DAKGSFGEFIVEIDG----GR---RETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP--------YCH---------- 135 (297)
T ss_dssp EEEEETTEEEEEETT----SC---EEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH--------HHH----------
T ss_pred EEEEcCCeEEEEECC----CC---EEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc--------cCc----------
Confidence 99987664 44433 43 7999999999999999999999764210 000000 000
Q ss_pred CHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEE
Q 041537 183 SEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEV 262 (547)
Q Consensus 183 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v 262 (547)
......++++|||+|++|+|+|..|.+. + +|+++++.+. .+ .+.+.+.|++.||++
T Consensus 136 --~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~---~~----~~~~~~~l~~~gv~i 191 (297)
T 3fbs_A 136 --GYELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIV---EP----DADQHALLAARGVRV 191 (297)
T ss_dssp --TGGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTC---CC----CHHHHHHHHHTTCEE
T ss_pred --chhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCC---CC----CHHHHHHHHHCCcEE
Confidence 0112456999999999999999998764 5 9999998875 22 234567888999999
Q ss_pred EcCceEEEEeCC-eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--C--CCc-cEEeCCCCCcCCCCCEE
Q 041537 263 LTECRVVNVSDK-EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--G--KRR-VLATNEWLRVKECENVY 336 (547)
Q Consensus 263 ~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~--~~g-~i~Vd~~l~~~~~~~Vf 336 (547)
+. +.|++++.+ .+.+. +|++ +++|.||||+|+.++. .+++.+++ + .+| ++.||+++++ +.|+||
T Consensus 192 ~~-~~v~~i~~~~~v~~~---~g~~--~~~D~vi~a~G~~p~~---~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vy 261 (297)
T 3fbs_A 192 ET-TRIREIAGHADVVLA---DGRS--IALAGLFTQPKLRITV---DWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIF 261 (297)
T ss_dssp EC-SCEEEEETTEEEEET---TSCE--EEESEEEECCEEECCC---SCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEE
T ss_pred Ec-ceeeeeecCCeEEeC---CCCE--EEEEEEEEccCcccCc---hhHHhcCCccccCCCCceEEeCCCCcc-CCCCEE
Confidence 96 899999887 45443 3765 9999999999975443 34556665 2 357 8999999998 899999
Q ss_pred EeCccCc
Q 041537 337 ALGDCAT 343 (547)
Q Consensus 337 aiGD~a~ 343 (547)
|+|||+.
T Consensus 262 a~GD~~~ 268 (297)
T 3fbs_A 262 ACGDVAR 268 (297)
T ss_dssp ECSGGGC
T ss_pred EEeecCC
Confidence 9999986
No 46
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.7e-34 Score=309.08 Aligned_cols=270 Identities=23% Similarity=0.341 Sum_probs=196.5
Q ss_pred CCeEEEECCchHHHHHHHhcCC-CCCeEEEEc--------CCCCCccCCCh----hh---------------hh-cc---
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV-SSYDVQVVS--------PQNYFAFTPLL----PS---------------VT-CG--- 75 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid--------~~~~~~~~p~l----~~---------------~~-~g--- 75 (547)
++||+|||||+||+++|..|++ .|++|+||| +++.++++... |. .. .+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 24444332111 10 00 00
Q ss_pred -----ccCccccch-----------hHHHHHHhC-CCcEEEEEEEEEEEECCCCEEEEecCCCCC--CceeeeecCEEEE
Q 041537 76 -----TVEARSIAE-----------PVRNIIKKR-NAEIQFWEAEAIKIDAAKNEVFCKSNIDKE--TRDFSLEYDYLII 136 (547)
Q Consensus 76 -----~~~~~~~~~-----------~~~~~~~~~-~~~v~~~~~~v~~id~~~~~v~~~~~~~~g--~~~~~i~yD~LVi 136 (547)
..+...+.. .+...+++. + ++++.++++.++. ++|.+.+.. +. .....+.||+|||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~-~~~~~~~~~~~~d~lVi 161 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEG--LDFFLGWGSLESK--NVVVVRETA-DPKSAVKERLQADHILL 161 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTT--EEEEESEEEEEET--TEEEEESSS-STTSCEEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEeEEEEeeC--CEEEEeecC-CccCCCCeEEEcCEEEE
Confidence 111111111 123344555 6 8889999998875 578776211 00 0013799999999
Q ss_pred ccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHh
Q 041537 137 AVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQED 216 (547)
Q Consensus 137 AtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~ 216 (547)
|||++|..|++||. ++++ +.+++.. +. ...++++|||+|++|+|+|..|.++.
T Consensus 162 ATGs~p~~p~i~G~-~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~~--- 214 (495)
T 2wpf_A 162 ATGSWPQMPAIPGI-EHCI---SSNEAFY-------------LP-------EPPRRVLTVGGGFISVEFAGIFNAYK--- 214 (495)
T ss_dssp CCCEEECCCCCTTG-GGCE---EHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHHHC---
T ss_pred eCCCCcCCCCCCCc-cccc---cHHHHHh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHhhC---
Confidence 99999999999987 3322 2222211 11 12459999999999999999998761
Q ss_pred hhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e-EEEEeccCCeEEEEeece
Q 041537 217 LINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E-ITMKIKSTGAVCSIPHGL 293 (547)
Q Consensus 217 ~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~ 293 (547)
.++.+|+++++.+++++.+++++.+.+.+.|+++||+++++++|++++.+ + +.+.. .+|+. +++|.
T Consensus 215 --------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D~ 283 (495)
T 2wpf_A 215 --------PPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTF-ESGKT--LDVDV 283 (495)
T ss_dssp --------CTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEE-TTSCE--EEESE
T ss_pred --------CCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEE-CCCcE--EEcCE
Confidence 12579999999999999999999999999999999999999999999743 2 44443 35764 99999
Q ss_pred EEEccCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 294 VLWSTGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 294 vv~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
||||+|. .|+++.| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 284 vv~a~G~--~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 284 VMMAIGR--IPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD 333 (495)
T ss_dssp EEECSCE--EECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEECCCC--cccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 9999995 5655445 456665 56889999999998 8999999999985
No 47
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.3e-34 Score=309.31 Aligned_cols=265 Identities=22% Similarity=0.285 Sum_probs=196.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhh------------------------hhc--cccCcc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPS------------------------VTC--GTVEAR 80 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~------------------------~~~--g~~~~~ 80 (547)
.+++|+|||||+||+++|..|++.|++|+|||++. ++++.+... +.. ...+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 45899999999999999999999999999999774 332211000 000 000001
Q ss_pred -----------ccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC---C
Q 041537 81 -----------SIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF---G 146 (547)
Q Consensus 81 -----------~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~---~ 146 (547)
.+...+...++..+ ++++.+++..+++....|... +. ++.||+||||||+.|..| +
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~~~~~~v~~~-----g~---~~~~d~lviAtG~~p~~p~~~~ 167 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSH--IEIIRGHAAFTSDPKPTIEVS-----GK---KYTAPHILIATGGMPSTPHESQ 167 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEECSCSSCEEEET-----TE---EEECSCEEECCCEEECCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEeEEEEeeCCeEEEEEC-----CE---EEEeeEEEEccCCCCCCCCcCC
Confidence 11122334455566 778899999998877777632 33 799999999999999988 8
Q ss_pred CCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCC
Q 041537 147 TPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKD 226 (547)
Q Consensus 147 ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~ 226 (547)
+||.. + ..+.++... +. ...++++|||+|++|+|+|..+.++
T Consensus 168 i~G~~-~---~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~-------------- 209 (478)
T 3dk9_A 168 IPGAS-L---GITSDGFFQ-------------LE-------ELPGRSVIVGAGYIAVEMAGILSAL-------------- 209 (478)
T ss_dssp STTGG-G---SBCHHHHTT-------------CC-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCCc-e---eEchHHhhc-------------hh-------hcCccEEEECCCHHHHHHHHHHHHc--------------
Confidence 99975 2 222222111 11 1235999999999999999999886
Q ss_pred CceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce--EEEEecc--CCeE--EEEeeceEEEcc
Q 041537 227 LVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KE--ITMKIKS--TGAV--CSIPHGLVLWST 298 (547)
Q Consensus 227 ~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~--v~~~~~~--~G~~--~~i~~D~vv~a~ 298 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||++++++.|++++. ++ +.+...+ +|+. .++++|.||||+
T Consensus 210 g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 210 GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred CCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 68999999999999999999999999999999999999999999964 33 4443321 1321 359999999999
Q ss_pred CCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 299 GVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 299 G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
|. .|+...| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 290 G~--~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 334 (478)
T 3dk9_A 290 GR--VPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG 334 (478)
T ss_dssp CE--EESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred cc--ccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC
Confidence 95 4555434 455665 67899999999999 9999999999984
No 48
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.5e-34 Score=308.90 Aligned_cols=270 Identities=18% Similarity=0.284 Sum_probs=189.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChh--------------------hhh-ccc-------cCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLP--------------------SVT-CGT-------VEA 79 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~--------------------~~~-~g~-------~~~ 79 (547)
+++|+|||||+||+++|..|++.|++|+|||+++.++.+.+.. ... .|. .+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999977664321110 000 000 000
Q ss_pred cccc-----------hhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceee------eecCEEEEccCCCc
Q 041537 80 RSIA-----------EPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFS------LEYDYLIIAVGAQV 142 (547)
Q Consensus 80 ~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~------i~yD~LViAtG~~~ 142 (547)
..+. ..+...+++.+ ++++.++...++ .+.+.+.... |. ..+ +.||+||+|||+.|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~--~~~v~V~~~~--G~-~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNK--VTYYKGNGSFED--ETKIRVTPVD--GL-EGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEESS--SSEEEEECCT--TC-TTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEcc--CCeEEEEecC--CC-cccccccceEEeCEEEECcCCCC
Confidence 1111 11334556666 666776665554 3455543211 31 125 99999999999988
Q ss_pred cCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCC
Q 041537 143 NTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYP 222 (547)
Q Consensus 143 ~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 222 (547)
. .+||.......+.+.+++..++ ...++++|||||++|+|+|..|.++
T Consensus 158 ~--~~~g~~~~~~~v~~~~~~~~~~--------------------~~~~~vvViGgG~~g~e~A~~l~~~---------- 205 (478)
T 1v59_A 158 T--PFPGIEIDEEKIVSSTGALSLK--------------------EIPKRLTIIGGGIIGLEMGSVYSRL---------- 205 (478)
T ss_dssp C--CCTTCCCCSSSEECHHHHTTCS--------------------SCCSEEEEECCSHHHHHHHHHHHHT----------
T ss_pred C--CCCCCCCCCceEEcHHHHHhhh--------------------ccCceEEEECCCHHHHHHHHHHHHc----------
Confidence 3 4566542212344444433211 1235999999999999999999876
Q ss_pred CCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---C-eEE--EEeccCCeEEEEeeceEEE
Q 041537 223 TVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD---K-EIT--MKIKSTGAVCSIPHGLVLW 296 (547)
Q Consensus 223 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~-~v~--~~~~~~G~~~~i~~D~vv~ 296 (547)
+.+|+++++.++++|.+++++.+.+.+.|++.||+++++++|++++. + .+. +.+..+|+..++++|.|||
T Consensus 206 ----g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 281 (478)
T 1v59_A 206 ----GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLV 281 (478)
T ss_dssp ----TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred ----CCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEE
Confidence 68999999999999999999999999999999999999999999974 3 233 3321124334599999999
Q ss_pred ccCCCCCcchHH-HHHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 297 STGVGTRPAIKD-FMEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 297 a~G~~~~p~~~~-l~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
|+|. .|+... +++++++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 282 a~G~--~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 328 (478)
T 1v59_A 282 AVGR--RPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTF 328 (478)
T ss_dssp CSCE--EECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred CCCC--CcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCC
Confidence 9995 455432 3455565 56889999999998 8999999999986
No 49
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.3e-35 Score=314.43 Aligned_cols=265 Identities=20% Similarity=0.361 Sum_probs=185.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhh---------------hh-cc-----ccCcc--
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPS---------------VT-CG-----TVEAR-- 80 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~---------------~~-~g-----~~~~~-- 80 (547)
++||||||||+||+++|..|++.|++|+|||+++ ++.+.. .|. .. .+ ..+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 4799999999999999999999999999999985 322210 010 00 01 01111
Q ss_pred ---------ccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecC---------CCCCCceeeeecCEEEEccCCCc
Q 041537 81 ---------SIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSN---------IDKETRDFSLEYDYLIIAVGAQV 142 (547)
Q Consensus 81 ---------~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~---------~~~g~~~~~i~yD~LViAtG~~~ 142 (547)
.+...+...+++.+ ++++.+++..+|+ +.+.+.+. .+.+ .++.||+||||||+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~---~~~~~d~lViAtGs~p 153 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDK--VDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNE---EILEGRNILIAVGNKP 153 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCCCC-------------------------------CBSSEEECCCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEEeccccccccccCCCc---eEEEeCEEEECCCCCC
Confidence 11112334456666 7777777776664 45555320 0002 2799999999999999
Q ss_pred cCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCC
Q 041537 143 NTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYP 222 (547)
Q Consensus 143 ~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 222 (547)
..|++||.+ ++. +.+++.. +. . .++++|||||++|+|+|..|.++
T Consensus 154 ~~p~i~G~~-~~~---~~~~~~~-------------~~-------~-~~~vvViGgG~ig~E~A~~l~~~---------- 198 (500)
T 1onf_A 154 VFPPVKGIE-NTI---SSDEFFN-------------IK-------E-SKKIGIVGSGYIAVELINVIKRL---------- 198 (500)
T ss_dssp CCCSCTTGG-GCE---EHHHHTT-------------CC-------C-CSEEEEECCSHHHHHHHHHHHTT----------
T ss_pred CCCCCCCCC-ccc---CHHHHhc-------------cC-------C-CCeEEEECChHHHHHHHHHHHHc----------
Confidence 999999973 322 2222111 11 1 46999999999999999999875
Q ss_pred CCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e-EEEEeccCCeEEEEeeceEEEccC
Q 041537 223 TVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E-ITMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 223 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
+.+|+++++.+++++.+++++.+.+.+.|+++||+++++++|++++.+ + +.+.. .+|+. ++++|.||||+|
T Consensus 199 ----g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~-~~~~D~vi~a~G 272 (500)
T 1onf_A 199 ----GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHL-SDGRI-YEHFDHVIYCVG 272 (500)
T ss_dssp ----TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEE-TTSCE-EEEESEEEECCC
T ss_pred ----CCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEE-CCCcE-EEECCEEEECCC
Confidence 689999999999999999999999999999999999999999999742 2 44443 34653 489999999999
Q ss_pred CCCCcchHHH-HHHhCC-CCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 300 VGTRPAIKDF-MEQIGQ-GKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 300 ~~~~p~~~~l-~~~~~~-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
.. |+.+.| ++.+++ ..+|+|.||+++|| +.|+|||+|||+..
T Consensus 273 ~~--p~~~~l~~~~~g~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~ 316 (500)
T 1onf_A 273 RS--PDTENLKLEKLNVETNNNYIVVDENQRT-SVNNIYAVGDCCMV 316 (500)
T ss_dssp BC--CTTTTSSCTTTTCCBSSSCEEECTTCBC-SSSSEEECSTTEEE
T ss_pred CC--cCCCCCCchhcCccccCCEEEECCCccc-CCCCEEEEeccccc
Confidence 64 444334 445555 36789999999998 89999999999964
No 50
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=7.1e-35 Score=295.56 Aligned_cols=261 Identities=12% Similarity=0.185 Sum_probs=193.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC--hh-----hhhc-cccCccccchhHHHHHHhCCCcEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL--LP-----SVTC-GTVEARSIAEPVRNIIKKRNAEIQ 98 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~--l~-----~~~~-g~~~~~~~~~~~~~~~~~~~~~v~ 98 (547)
++++|+|||||+|||++|..|++.|++|+|||+++.+++... .+ ..+. ......++...+...+.+.+ ++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 83 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFD--QT 83 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSC--CE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhC--Cc
Confidence 457999999999999999999999999999999987653221 00 0100 11123455666777777777 44
Q ss_pred EE-EEEEEEEECCCC---EEEEecCCCCCCceeeeecCEEEEccCC---CccCCCCCCcccc---ccccCCHHHHHHHHH
Q 041537 99 FW-EAEAIKIDAAKN---EVFCKSNIDKETRDFSLEYDYLIIAVGA---QVNTFGTPGVLEN---CHFLKELEDAQKIRR 168 (547)
Q Consensus 99 ~~-~~~v~~id~~~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~---~~~~~~ipG~~e~---~~~~~~~~~a~~l~~ 168 (547)
++ ..+|+.+++..+ .|.+.+ + ++.||+||+|||+ .|..+++||..+. .... ...
T Consensus 84 ~~~~~~v~~i~~~~~~~~~v~~~~----g----~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~------- 147 (332)
T 3lzw_A 84 ICLEQAVESVEKQADGVFKLVTNE----E----THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVD------- 147 (332)
T ss_dssp EECSCCEEEEEECTTSCEEEEESS----E----EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCS-------
T ss_pred EEccCEEEEEEECCCCcEEEEECC----C----EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecC-------
Confidence 44 689999998876 555543 2 5999999999999 8888899997641 1111 111
Q ss_pred HHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHH
Q 041537 169 TVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERIS 248 (547)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~ 248 (547)
.......++++|||+|++|+|+|..|.+. +.+|+++++.+++++. +.
T Consensus 148 ---------------~~~~~~~~~v~vvG~g~~~~e~a~~l~~~--------------~~~v~~~~~~~~~~~~-~~--- 194 (332)
T 3lzw_A 148 ---------------DLQKFAGRRVAILGGGDSAVDWALMLEPI--------------AKEVSIIHRRDKFRAH-EH--- 194 (332)
T ss_dssp ---------------CGGGGBTCEEEEECSSHHHHHHHHHHTTT--------------BSEEEEECSSSSCSSC-HH---
T ss_pred ---------------CHHHcCCCEEEEECCCHhHHHHHHHHHhh--------------CCeEEEEEecCcCCcc-HH---
Confidence 11113457999999999999999998765 5799999999987543 22
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEeCCe----EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCccEEe
Q 041537 249 SFAEKKFQRDGIEVLTECRVVNVSDKE----ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLAT 323 (547)
Q Consensus 249 ~~~~~~l~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~V 323 (547)
..+.|++.||+++++++|++++.+. +.+.+..+|+..++++|.||||+|+.++. .+++.+++ ..+|+|.|
T Consensus 195 --~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~~~~g~i~v 269 (332)
T 3lzw_A 195 --SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSL---GPIKNWGLDIEKNSIVV 269 (332)
T ss_dssp --HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCC---GGGGGSSCCEETTEEEC
T ss_pred --HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCc---hHHhhcCccccCCeEEe
Confidence 2345789999999999999998754 77776445555569999999999965543 34555665 36789999
Q ss_pred CCCCCcCCCCCEEEeCccCcc
Q 041537 324 NEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 324 d~~l~~~~~~~VfaiGD~a~~ 344 (547)
|+++|+ +.|+|||+|||+..
T Consensus 270 d~~~~t-~~~~vya~GD~~~~ 289 (332)
T 3lzw_A 270 KSTMET-NIEGFFAAGDICTY 289 (332)
T ss_dssp CTTSBC-SSTTEEECGGGEEC
T ss_pred CCCCce-ecCCEEEccceecC
Confidence 999998 89999999999864
No 51
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=3e-34 Score=307.15 Aligned_cols=269 Identities=20% Similarity=0.278 Sum_probs=194.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC--------CCCccCCChh----h---------------h-hcc---
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ--------NYFAFTPLLP----S---------------V-TCG--- 75 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~--------~~~~~~p~l~----~---------------~-~~g--- 75 (547)
..+||+|||||+||+++|..|++.|++|+|||++ ..++++.+.. . . ..|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4589999999999999999999999999999973 2333321110 0 0 000
Q ss_pred ----ccCccccchh-----------HHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCC
Q 041537 76 ----TVEARSIAEP-----------VRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGA 140 (547)
Q Consensus 76 ----~~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~ 140 (547)
..+...+... +...++..+ ++++.+++..+++....|...+ |. ..++.||+||||||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~i~g~~~~~~~~~v~v~~~~----g~-~~~~~~d~lViATGs 157 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRK--VKYFNIKASFVDEHTVRGVDKG----GK-ATLLSAEHIVIATGG 157 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECCEEEESSSSEEEEECTT----SC-EEEEEEEEEEECCCE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCCeEEEEeCC----Cc-eEEEECCEEEEcCCC
Confidence 1111111111 233445565 7889999988886644443322 32 348999999999999
Q ss_pred CccCCC-CCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhh
Q 041537 141 QVNTFG-TPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLIN 219 (547)
Q Consensus 141 ~~~~~~-ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~ 219 (547)
+|..|+ +||..++.. +.+++.. +. ...++++|||+|++|+|+|..|.++
T Consensus 158 ~p~~p~~i~G~~~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~------- 207 (488)
T 3dgz_A 158 RPRYPTQVKGALEYGI---TSDDIFW-------------LK-------ESPGKTLVVGASYVALECAGFLTGI------- 207 (488)
T ss_dssp EECCCSSCBTHHHHCB---CHHHHTT-------------CS-------SCCCSEEEECCSHHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCCcccccC---cHHHHHh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc-------
Confidence 999998 999765432 2222111 11 2335899999999999999999986
Q ss_pred hCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---Ce--EEEEeccCCeEEEEeeceE
Q 041537 220 LYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD---KE--ITMKIKSTGAVCSIPHGLV 294 (547)
Q Consensus 220 ~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~~--v~~~~~~~G~~~~i~~D~v 294 (547)
+.+|+++++. .+++.+++++.+.+.+.|++.||++++++.+++++. +. +++.+..+|+..++++|.|
T Consensus 208 -------g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~v 279 (488)
T 3dgz_A 208 -------GLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTV 279 (488)
T ss_dssp -------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEE
T ss_pred -------CCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEE
Confidence 6899999986 578999999999999999999999999999999853 33 4444433466556899999
Q ss_pred EEccCCCCCcchHHH-HHHhCC--C-CCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 295 LWSTGVGTRPAIKDF-MEQIGQ--G-KRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 295 v~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
|||+|. .|+...+ ++..++ + .+|+|.||+++|| +.|+|||+|||+.
T Consensus 280 i~a~G~--~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (488)
T 3dgz_A 280 LWAIGR--VPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAE 329 (488)
T ss_dssp EECSCE--EESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred EEcccC--CcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecC
Confidence 999995 5555444 455565 5 6799999999998 9999999999974
No 52
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.5e-34 Score=305.52 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=195.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh---------------hh-cc------ccCcc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS---------------VT-CG------TVEAR 80 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~---------------~~-~g------~~~~~ 80 (547)
.++||+|||||+||+++|..|++.|++|+|||++. ++.+... |. .. .+ ..+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 35799999999999999999999999999999984 3322110 00 00 01 00111
Q ss_pred c-----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCC
Q 041537 81 S-----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPG 149 (547)
Q Consensus 81 ~-----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG 149 (547)
. +...++..+...+ ++++.+++..++. +.|.+ + +. ++.||+||||||+.|..|++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~-~----g~---~~~~d~lviAtGs~p~~p~i~G 149 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLG--ITRVDGHARFVDA--HTIEV-E----GQ---RLSADHIVIATGGRPIVPRLPG 149 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEE-T----TE---EEEEEEEEECCCEEECCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--CEEEEeEEEEccC--CEEEE-C----CE---EEEcCEEEECCCCCCCCCCCCC
Confidence 1 1112234445666 7788888888874 57776 3 43 7999999999999999999999
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce
Q 041537 150 VLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR 229 (547)
Q Consensus 150 ~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 229 (547)
. ++ +.+.+++..+ . ...++++|||+|++|+|+|..|.++ +.+
T Consensus 150 ~-~~---~~~~~~~~~~-------------~-------~~~~~vvVvGgG~~g~e~A~~l~~~--------------G~~ 191 (463)
T 2r9z_A 150 A-EL---GITSDGFFAL-------------Q-------QQPKRVAIIGAGYIGIELAGLLRSF--------------GSE 191 (463)
T ss_dssp G-GG---SBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCE
T ss_pred c-cc---eecHHHHhhh-------------h-------ccCCEEEEECCCHHHHHHHHHHHhc--------------CCE
Confidence 7 33 2233332221 1 1235999999999999999999876 689
Q ss_pred EEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchH
Q 041537 230 ITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIK 307 (547)
Q Consensus 230 V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~ 307 (547)
|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++. +++.+.. .+|+. ++++|.||+|+|. .|+++
T Consensus 192 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~G~~-~i~~D~vv~a~G~--~p~~~ 267 (463)
T 2r9z_A 192 VTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVA-QDGTR-LEGFDSVIWAVGR--APNTR 267 (463)
T ss_dssp EEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEE-TTCCE-EEEESEEEECSCE--EESCT
T ss_pred EEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEE-eCCcE-EEEcCEEEECCCC--CcCCC
Confidence 99999999999999999999999999999999999999999964 3444443 35762 3999999999995 55554
Q ss_pred HH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 308 DF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 308 ~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
.| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 268 ~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 268 DLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITG 305 (463)
T ss_dssp TSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGT
T ss_pred CCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCC
Confidence 34 455565 56899999999998 8999999999975
No 53
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.6e-34 Score=290.80 Aligned_cols=262 Identities=16% Similarity=0.140 Sum_probs=187.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEE-EcCCCCCccCC----Chhhhhc--cccCccccchhHHHHHHhCCCcEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQV-VSPQNYFAFTP----LLPSVTC--GTVEARSIAEPVRNIIKKRNAEIQF 99 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtl-id~~~~~~~~p----~l~~~~~--g~~~~~~~~~~~~~~~~~~~~~v~~ 99 (547)
.+++|+|||||+|||++|..|++.|++|+| ||+ +.++... ..+.++. ......++...+...+++.+ +++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFG--LKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTC--CEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcC--cEE
Confidence 468999999999999999999999999999 999 4333221 1111111 12233456667778888887 666
Q ss_pred EEEEEEEEECCC--CEEE--EecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHH
Q 041537 100 WEAEAIKIDAAK--NEVF--CKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCF 174 (547)
Q Consensus 100 ~~~~v~~id~~~--~~v~--~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~ 174 (547)
+.++|..+ ++. +.+. +.. +. ++.||+||+|||+.++.|.+||..... ..+...... .
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~----~~---~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~---~------- 141 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEG----GK---TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATC---D------- 141 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETT----SC---EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH---H-------
T ss_pred EEEEEEEE-ecCCCCcEEEEEec----CC---EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecc---c-------
Confidence 67789888 544 4455 443 22 799999999999999999999976421 011111100 0
Q ss_pred HHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHH
Q 041537 175 EKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKK 254 (547)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~ 254 (547)
......++++|||+|++|+|+|..|.+. +.+|+++++.+.+.. ++. ...+.
T Consensus 142 ----------~~~~~~~~v~viG~g~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~~~~ 192 (315)
T 3r9u_A 142 ----------GFFYKNKEVAVLGGGDTALEEALYLANI--------------CSKIYLIHRRDEFRA--APS---TVEKV 192 (315)
T ss_dssp ----------GGGGTTSEEEEECCBHHHHHHHHHHHTT--------------SSEEEEECSSSSCBS--CHH---HHHHH
T ss_pred ----------ccccCcCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCCCCCC--CHH---HHHHH
Confidence 0113456999999999999999999865 679999999988632 333 33455
Q ss_pred HHhCCcEEEcCceEEEEeCCe-----EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHH---hC-C--CCCccEEe
Q 041537 255 FQRDGIEVLTECRVVNVSDKE-----ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQ---IG-Q--GKRRVLAT 323 (547)
Q Consensus 255 l~~~GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~---~~-~--~~~g~i~V 323 (547)
+++.||++++++.|++++.+. +++. ..+|+..++++|.||||+|..++. .+... ++ + +.+|+|.|
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~g~l~~~~~g~i~v 268 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRN---EILKQDDSKFLCNMEEGGQVSV 268 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECC---GGGBCTTSCBSSCBCTTSCBCC
T ss_pred HhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCc---hhhhcccccceeeecCCCcEEe
Confidence 678899999999999996543 5555 235765569999999999965443 23222 33 4 67799999
Q ss_pred CCCCCcCCCCCEEEeCccCc
Q 041537 324 NEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 324 d~~l~~~~~~~VfaiGD~a~ 343 (547)
|+++|+ +.|+|||+|||+.
T Consensus 269 d~~~~t-~~~~v~a~GD~~~ 287 (315)
T 3r9u_A 269 DLKMQT-SVAGLFAAGDLRK 287 (315)
T ss_dssp CTTCBC-SSTTEEECGGGBT
T ss_pred CCCccc-CCCCEEEeecccC
Confidence 999999 9999999999985
No 54
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.9e-34 Score=288.45 Aligned_cols=263 Identities=18% Similarity=0.236 Sum_probs=186.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhhhc-cccCccccchhHHHHHHhCCCcEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEA 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (547)
.++|+|||||++|+++|..|++.|++|+|||+.. .+.... +..++. ......++...+.+.+++.+ ++++.+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYA--KIREGV 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTS--EEEETC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcC--CEEEEe
Confidence 5799999999999999999999999999999953 222111 001110 11222344555666677776 666668
Q ss_pred EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 103 EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
+++.++.+.+.+.+... +. ++.||+||+|+|+.++.+++||..++. ..+..... . +
T Consensus 93 ~v~~i~~~~~~~~v~~~---~~---~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~-------~-~--------- 149 (319)
T 3cty_A 93 EVRSIKKTQGGFDIETN---DD---TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCST-------C-D--------- 149 (319)
T ss_dssp CEEEEEEETTEEEEEES---SS---EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH-------H-H---------
T ss_pred eEEEEEEeCCEEEEEEC---CC---EEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEe-------c-c---------
Confidence 89999987774444321 33 799999999999999999999875321 01111100 0 0
Q ss_pred CCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcE
Q 041537 182 LSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~ 261 (547)
......++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++. +.+.+++.||+
T Consensus 150 ---~~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~i~~~~~~~~--~~~----l~~~l~~~gv~ 206 (319)
T 3cty_A 150 ---GYLFKGKRVVTIGGGNSGAIAAISMSEY--------------VKNVTIIEYMPKYMC--ENA----YVQEIKKRNIP 206 (319)
T ss_dssp ---GGGGBTSEEEEECCSHHHHHHHHHHTTT--------------BSEEEEECSSSSCCS--CHH----HHHHHHHTTCC
T ss_pred ---hhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCcEEEEEcCCccCC--CHH----HHHHHhcCCcE
Confidence 0013456999999999999999998865 579999999887643 233 45566789999
Q ss_pred EEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCCC
Q 041537 262 VLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECEN 334 (547)
Q Consensus 262 v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~ 334 (547)
++++++|+++..+ .+.+.+..+|+..++++|.||||+|+.+ +. .++..+++ +.+|+|.||+++|+ +.|+
T Consensus 207 i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p--~~-~~l~~~gl~~~~~g~i~vd~~~~t-~~~~ 282 (319)
T 3cty_A 207 YIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP--QT-SFLKDSGVKLDERGYIVVDSRQRT-SVPG 282 (319)
T ss_dssp EECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE--CC-GGGTTSCCCBCTTSCBCCCTTCBC-SSTT
T ss_pred EEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc--Ch-HHHhhccccccCCccEeCCCCCcc-CCCC
Confidence 9999999999754 3555533357655699999999999644 44 34445555 66799999999998 8999
Q ss_pred EEEeCccCc
Q 041537 335 VYALGDCAT 343 (547)
Q Consensus 335 VfaiGD~a~ 343 (547)
|||+|||+.
T Consensus 283 vya~GD~~~ 291 (319)
T 3cty_A 283 VYAAGDVTS 291 (319)
T ss_dssp EEECSTTBT
T ss_pred EEEeecccC
Confidence 999999986
No 55
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=6.5e-34 Score=286.13 Aligned_cols=264 Identities=16% Similarity=0.240 Sum_probs=185.8
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc--CCChhhhhc-cccCccccchhHHHHHHhCCCcEEEEEE-EE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF--TPLLPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEA-EA 104 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~--~p~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 104 (547)
++|+|||||++|+++|..|++.|++|+|||+...-.+ .+.++.+.. .......+...++..+++.+ ++++.+ +|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~v 79 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYD--VDVIDSQSA 79 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSC--EEEECSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcC--CeEEccCEE
Confidence 6899999999999999999999999999987521111 011111111 11122345556677777776 777776 89
Q ss_pred EEEECCC-----CEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcccccc-ccCCHHHHHHHHHHHHHHHHHcc
Q 041537 105 IKIDAAK-----NEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCH-FLKELEDAQKIRRTVTDCFEKAV 178 (547)
Q Consensus 105 ~~id~~~-----~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~-~~~~~~~a~~l~~~l~~~~~~~~ 178 (547)
+.++++. ..|.+.+ +. ++.||+||+|+|+.+..|++||..++.. .+..... +.
T Consensus 80 ~~i~~~~~~~~~~~v~~~~----g~---~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~----------- 138 (310)
T 1fl2_A 80 SKLIPAAVEGGLHQIETAS----GA---VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CD----------- 138 (310)
T ss_dssp EEEECCSSTTCCEEEEETT----SC---EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HH-----------
T ss_pred EEEEecccCCceEEEEECC----CC---EEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---Cc-----------
Confidence 9998752 3555543 43 7999999999999998888999754210 0111110 00
Q ss_pred CCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHh-
Q 041537 179 LPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQR- 257 (547)
Q Consensus 179 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~- 257 (547)
......++|+|||+|++|+|+|..|... +.+|+++++.+.+. +++ .+.+.|++
T Consensus 139 ------~~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~----~~~~~l~~~ 192 (310)
T 1fl2_A 139 ------GPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMK--ADQ----VLQDKLRSL 192 (310)
T ss_dssp ------GGGGBTCEEEEECCSHHHHHHHHHHHTT--------------BSEEEEECSSSSCC--SCH----HHHHHHHTC
T ss_pred ------HhhcCCCEEEEECCCHHHHHHHHHHHHh--------------CCEEEEEEeCcccC--ccH----HHHHHHhhC
Confidence 0113457999999999999999998864 67999999998763 333 34556777
Q ss_pred CCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCC
Q 041537 258 DGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKEC 332 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~ 332 (547)
.||+++++++|+++.++ .+++.+..+|+..++++|.||||+|+.+ +.+.+...+.++.+|+|.||+++|+ +.
T Consensus 193 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p--~~~~l~~~l~~~~~g~i~vd~~~~t-~~ 269 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP--NTNWLEGAVERNRMGEIIIDAKCET-NV 269 (310)
T ss_dssp TTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE--SCGGGTTTSCBCTTSCBCCCTTCBC-SS
T ss_pred CCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc--CchHHhccccccCCCcEEcCCCCcc-CC
Confidence 69999999999999754 3566553446655699999999999644 4322221234467889999999997 89
Q ss_pred CCEEEeCccCcc
Q 041537 333 ENVYALGDCATI 344 (547)
Q Consensus 333 ~~VfaiGD~a~~ 344 (547)
|+|||+|||+..
T Consensus 270 ~~vya~GD~~~~ 281 (310)
T 1fl2_A 270 KGVFAAGDCTTV 281 (310)
T ss_dssp TTEEECSTTBSC
T ss_pred CCEEEeecccCC
Confidence 999999999864
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.9e-34 Score=294.25 Aligned_cols=264 Identities=16% Similarity=0.264 Sum_probs=190.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC--hh-----hhh-ccccCccccchhHHHHHHhCCCcEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL--LP-----SVT-CGTVEARSIAEPVRNIIKKRNAEIQ 98 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~--l~-----~~~-~g~~~~~~~~~~~~~~~~~~~~~v~ 98 (547)
.+++|+|||||++|+++|..|++.|++|+|||+++.+++... .+ ..+ .......++...+...+...++.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 457999999999999999999999999999999877643221 00 100 0011223455556667777774332
Q ss_pred EEEEEEEEEECCCC---EEEEecCCCCCCceeeeecCEEEEccCC---CccCCCCCC-ccccc----c-ccCCHHHHHHH
Q 041537 99 FWEAEAIKIDAAKN---EVFCKSNIDKETRDFSLEYDYLIIAVGA---QVNTFGTPG-VLENC----H-FLKELEDAQKI 166 (547)
Q Consensus 99 ~~~~~v~~id~~~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~---~~~~~~ipG-~~e~~----~-~~~~~~~a~~l 166 (547)
...+|+.++...+ .|.+.+ +. ++.||+||+|+|+ .|..+++|| .++.. + .+++.+
T Consensus 93 -~~~~v~~i~~~~~~~~~v~~~~----g~---~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~----- 159 (360)
T 3ab1_A 93 -LNETVTKYTKLDDGTFETRTNT----GN---VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE----- 159 (360)
T ss_dssp -CSCCEEEEEECTTSCEEEEETT----SC---EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG-----
T ss_pred -cCCEEEEEEECCCceEEEEECC----Cc---EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH-----
Confidence 3568999987654 454443 43 7999999999999 566667777 54321 1 111110
Q ss_pred HHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHH
Q 041537 167 RRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDER 246 (547)
Q Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~ 246 (547)
....++|+|||+|++|+|+|..|.+. +.+|+++++.+.+++. +.
T Consensus 160 --------------------~~~~~~vvVvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~~--~~ 203 (360)
T 3ab1_A 160 --------------------DFKGKRVVIVGGGDSALDWTVGLIKN--------------AASVTLVHRGHEFQGH--GK 203 (360)
T ss_dssp --------------------GGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCSSC--SH
T ss_pred --------------------HcCCCcEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCCCCCC--HH
Confidence 12356999999999999999988764 6799999999887664 35
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCC-CCcc
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQG-KRRV 320 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~-~~g~ 320 (547)
+.+.+.+.+++.||+++++++|++++.+ .+.+. ..+|+..++++|.||||+|+.++. .+++.+++. .+|+
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g~ 279 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNL---GPLARWDLELYENA 279 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSC---GGGGGSSCCEETTE
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCH---HHHHhhccccccCe
Confidence 6677788888999999999999999653 35554 234754469999999999965543 344555652 4789
Q ss_pred EEeCCCCCcCCCCCEEEeCccCcc
Q 041537 321 LATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 321 i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
|.||+++|+ +.|+|||+|||+..
T Consensus 280 i~vd~~~~t-~~~~vya~GD~~~~ 302 (360)
T 3ab1_A 280 LVVDSHMKT-SVDGLYAAGDIAYY 302 (360)
T ss_dssp EECCTTSBC-SSTTEEECSTTEEC
T ss_pred eeecCCCcC-CCCCEEEecCccCC
Confidence 999999998 89999999999874
No 57
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=3.9e-34 Score=287.91 Aligned_cols=259 Identities=15% Similarity=0.147 Sum_probs=185.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCCCCccCCC----hhhhh--ccccCccccchhHHHHHHhCCCcEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQNYFAFTPL----LPSVT--CGTVEARSIAEPVRNIIKKRNAEIQFW 100 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~~~~~~p~----l~~~~--~g~~~~~~~~~~~~~~~~~~~~~v~~~ 100 (547)
+++|+|||||++|+++|..|++.|+ +|+|||++. .+.... ...++ ....+...+...+...+.+.+ ++++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--v~~~ 77 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFG--LKHE 77 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTS--CEEE
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcC--CEEE
Confidence 3689999999999999999999999 999999963 221110 11111 111233445566677777777 5555
Q ss_pred EEEEEEEECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcccc----ccccCCHHHHHHHHHHHHHHH
Q 041537 101 EAEAIKIDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLEN----CHFLKELEDAQKIRRTVTDCF 174 (547)
Q Consensus 101 ~~~v~~id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~----~~~~~~~~~a~~l~~~l~~~~ 174 (547)
.++|+.++.+.+. |.+.+ +. ++.||+||+|+|+.+..|++||..+. .+.+...+
T Consensus 78 ~~~v~~i~~~~~~~~v~~~~----g~---~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~------------- 137 (311)
T 2q0l_A 78 MTAVQRVSKKDSHFVILAED----GK---TFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD------------- 137 (311)
T ss_dssp CSCEEEEEEETTEEEEEETT----SC---EEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH-------------
T ss_pred EEEEEEEEEcCCEEEEEEcC----CC---EEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC-------------
Confidence 6889999987774 44433 43 89999999999999999999987532 11111100
Q ss_pred HHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHH
Q 041537 175 EKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKK 254 (547)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~ 254 (547)
. .....++|+|||+|++|+|+|..|.+. +.+|+++++.+.+. .++. +.+.
T Consensus 138 -~---------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~~----~~~~ 187 (311)
T 2q0l_A 138 -G---------FFYKNKEVAVLGGGDTAVEEAIYLANI--------------CKKVYLIHRRDGFR--CAPI----TLEH 187 (311)
T ss_dssp -G---------GGGTTSEEEEECCSHHHHHHHHHHHTT--------------SSEEEEECSSSSCC--SCHH----HHHH
T ss_pred -h---------hhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeeCCccC--CCHH----HHHH
Confidence 0 012346999999999999999998865 67999999998763 3333 3344
Q ss_pred HH-hCCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhC----C--CCCccEE
Q 041537 255 FQ-RDGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIG----Q--GKRRVLA 322 (547)
Q Consensus 255 l~-~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~----~--~~~g~i~ 322 (547)
+. +.||++++++.|++++.+ .+.+....+|+..++++|.||||+|+. |+. .++..++ + +.+|+|.
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~--p~~-~~l~~~g~~~~l~~~~~g~i~ 264 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD--VNN-AVLKQEDNSMLCKCDEYGSIV 264 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE--ECC-GGGBCTTSCBSSCBCTTSCBC
T ss_pred HhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc--cCh-hhhhcccccceeEeccCCCEE
Confidence 54 479999999999999653 355553335765569999999999964 444 3333332 3 5678999
Q ss_pred eCCCCCcCCCCCEEEeCccCc
Q 041537 323 TNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 323 Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
||+++|+ +.|+|||+|||+.
T Consensus 265 vd~~~~t-~~~~vya~GD~~~ 284 (311)
T 2q0l_A 265 VDFSMKT-NVQGLFAAGDIRI 284 (311)
T ss_dssp CCTTCBC-SSTTEEECSTTBT
T ss_pred eCCcccc-CCCCeEEcccccC
Confidence 9999998 8999999999986
No 58
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.3e-34 Score=290.66 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=190.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC-------hhhhhccccCccccchhHHHHHHhCCCcEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL-------LPSVTCGTVEARSIAEPVRNIIKKRNAEIQF 99 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~-------l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 99 (547)
++++|+|||||+||+++|..|++.|++|+|||+.. .+.... .+.+. ..+...++...+...+...+ +++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 79 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDP-NDLTGPLLMERMHEHATKFE--TEI 79 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCC-SSCBHHHHHHHHHHHHHHTT--CEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCC-CCCCHHHHHHHHHHHHHHCC--CEE
Confidence 35799999999999999999999999999999752 221110 01110 01222345556667777777 666
Q ss_pred EEEEEEEEECCCCEEEE-ecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHHHc
Q 041537 100 WEAEAIKIDAAKNEVFC-KSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFEKA 177 (547)
Q Consensus 100 ~~~~v~~id~~~~~v~~-~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~~~ 177 (547)
+.++++.++++.+.+.+ .+ +. ++.||+||+|+|+.+..|++||..+.. ..+..... ...
T Consensus 80 ~~~~v~~i~~~~~~~~v~~~----~~---~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~--------- 140 (320)
T 1trb_A 80 IFDHINKVDLQNRPFRLNGD----NG---EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDG--------- 140 (320)
T ss_dssp ECCCEEEEECSSSSEEEEES----SC---EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHG---------
T ss_pred EEeeeeEEEecCCEEEEEeC----CC---EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCc---------
Confidence 77789999987775553 32 43 899999999999999888888865321 01111110 000
Q ss_pred cCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHh
Q 041537 178 VLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQR 257 (547)
Q Consensus 178 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~ 257 (547)
.....++++|||+|++|+|+|..|.++ +.+|+++++.+.+.+ ++.+.+.+.+.+++
T Consensus 141 --------~~~~~~~v~ViG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~~~~l~~~l~~ 196 (320)
T 1trb_A 141 --------FFYRNQKVAVIGGGNTAVEEALYLSNI--------------ASEVHLIHRRDGFRA--EKILIKRLMDKVEN 196 (320)
T ss_dssp --------GGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCC--CHHHHHHHHHHHHT
T ss_pred --------cccCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCcccc--CHHHHHHHHHhccc
Confidence 012456999999999999999998865 689999999987653 56788888899999
Q ss_pred CCcEEEcCceEEEEeCCe-----EEEEeccC-CeEEEEeeceEEEccCCCCCcchHHHHH-HhCCCCCccEEeCCCC---
Q 041537 258 DGIEVLTECRVVNVSDKE-----ITMKIKST-GAVCSIPHGLVLWSTGVGTRPAIKDFME-QIGQGKRRVLATNEWL--- 327 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~~-----v~~~~~~~-G~~~~i~~D~vv~a~G~~~~p~~~~l~~-~~~~~~~g~i~Vd~~l--- 327 (547)
.||+++++++|++++.+. +++.+..+ |+..+++||.||||+|+.++ . .++. .+.++ +|+|.||+++
T Consensus 197 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~--~-~~~~~~l~~~-~G~i~vd~~~~~~ 272 (320)
T 1trb_A 197 GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN--T-AIFEGQLELE-NGYIKVQSGIHGN 272 (320)
T ss_dssp SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES--C-GGGTTTSCEE-TTEECCCCSSSSC
T ss_pred CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC--h-HHhccccccc-CceEEECCCcccc
Confidence 999999999999997543 55554222 44345999999999996544 3 2322 23346 8999999997
Q ss_pred --CcCCCCCEEEeCccCcc
Q 041537 328 --RVKECENVYALGDCATI 344 (547)
Q Consensus 328 --~~~~~~~VfaiGD~a~~ 344 (547)
++ +.|+|||+|||+..
T Consensus 273 ~~~t-~~~~vya~GD~~~~ 290 (320)
T 1trb_A 273 ATQT-SIPGVFAAGDVMDH 290 (320)
T ss_dssp TTBC-SSTTEEECGGGGCS
T ss_pred cccC-CCCCEEEcccccCC
Confidence 55 89999999999863
No 59
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-34 Score=309.43 Aligned_cols=268 Identities=21% Similarity=0.337 Sum_probs=196.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCC---CCeEEEEcCCCCCccCCCh----hh---------------hh-ccc--------
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS---SYDVQVVSPQNYFAFTPLL----PS---------------VT-CGT-------- 76 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~---g~~Vtlid~~~~~~~~p~l----~~---------------~~-~g~-------- 76 (547)
+++|||||||+||+++|.+|++. |++|+|||+++ ++++... |. .. .|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999977 99999999987 4332110 00 00 010
Q ss_pred cCccc-----------cchhHHHHHHhCCCcEEEEEEEEEEEECC----CCEEEEecCCCCCCceeeeecCEEEEccCCC
Q 041537 77 VEARS-----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAA----KNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ 141 (547)
Q Consensus 77 ~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~----~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~ 141 (547)
.+... +...+..++++.+ ++++.++++.+++. ++.+.+.... ++ ...+.||+||+|||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~~~~~~~V~~~~--g~-~~~~~~d~lviATGs~ 155 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMG--VQVIAGRGELIDSTPGLARHRIKATAAD--GS-TSEHEADVVLVATGAS 155 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECCSSSCCSSEEEEEECTT--SC-EEEEEESEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCcccCCCCEEEEEeCC--Cc-EEEEEeCEEEEcCCCC
Confidence 01111 1122355666777 77788888888873 2455554311 21 1379999999999999
Q ss_pred ccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhC
Q 041537 142 VNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLY 221 (547)
Q Consensus 142 ~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~ 221 (547)
|..|++||.+... +.+..++.. +. ...++++|||+|++|+|+|..+..+
T Consensus 156 p~~p~i~g~~~~~--v~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~--------- 204 (499)
T 1xdi_A 156 PRILPSAQPDGER--ILTWRQLYD-------------LD-------ALPDHLIVVGSGVTGAEFVDAYTEL--------- 204 (499)
T ss_dssp ECCCGGGCCCSSS--EEEGGGGGG-------------CS-------SCCSSEEEESCSHHHHHHHHHHHHT---------
T ss_pred CCCCCCCCCCcCc--EEehhHhhh-------------hh-------ccCCeEEEECCCHHHHHHHHHHHHc---------
Confidence 9988888875321 112222111 11 1235999999999999999999876
Q ss_pred CCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccC
Q 041537 222 PTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 222 ~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ ++.+.. .+|+. +++|.||+|+|
T Consensus 205 -----g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~a~G 276 (499)
T 1xdi_A 205 -----GVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTM-TDGRT--VEGSHALMTIG 276 (499)
T ss_dssp -----TCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEE-TTSCE--EEESEEEECCC
T ss_pred -----CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 689999999999999999999999999999999999999999999753 366654 34654 99999999999
Q ss_pred CCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 300 VGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 300 ~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
.+ |+.+.+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 277 ~~--p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 320 (499)
T 1xdi_A 277 SV--PNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTG 320 (499)
T ss_dssp EE--ECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGT
T ss_pred CC--cCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 54 444222 445555 56789999999999 8999999999975
No 60
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.9e-34 Score=304.71 Aligned_cols=260 Identities=20% Similarity=0.296 Sum_probs=190.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh---------------hh----ccc------cC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS---------------VT----CGT------VE 78 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~---------------~~----~g~------~~ 78 (547)
++||||||||+||+++|..|++.|++|+|||+ +.++++... |. .. .|. .+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 57999999999999999999999999999999 444322110 00 00 111 01
Q ss_pred ccccch-----------hHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC-
Q 041537 79 ARSIAE-----------PVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG- 146 (547)
Q Consensus 79 ~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~- 146 (547)
...+.. .+..++++.+ ++++.+++..++ .++|.+.+ .++.||+||||||++|+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~--~~~v~v~~--------~~~~~d~lviATGs~p~~~~~ 151 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHG--VKVVHGWAKVLD--GKQVEVDG--------QRIQCEHLLLATGSSSVELPM 151 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSCEEEEE--TTEEEETT--------EEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEEEEEEcc--CCEEEEee--------EEEEeCEEEEeCCCCCCCCCC
Confidence 111111 1234566676 777788777776 45777743 28999999999999997765
Q ss_pred CCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCC
Q 041537 147 TPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKD 226 (547)
Q Consensus 147 ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~ 226 (547)
+| .+. .+.+.+++.. +. ...++++|||||++|+|+|..|.++
T Consensus 152 ~~-~~~---~v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~-------------- 193 (458)
T 1lvl_A 152 LP-LGG---PVISSTEALA-------------PK-------ALPQHLVVVGGGYIGLELGIAYRKL-------------- 193 (458)
T ss_dssp BC-CBT---TEECHHHHTC-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHH--------------
T ss_pred CC-ccC---cEecHHHHhh-------------hh-------ccCCeEEEECcCHHHHHHHHHHHHC--------------
Confidence 55 222 2333333221 11 1346999999999999999999887
Q ss_pred CceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcch
Q 041537 227 LVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 227 ~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
+.+|+++++.++++|.+++++.+.+.+.|++.||+++++++|++++.+++.+. ..+|+..++++|.||||+|. .|+.
T Consensus 194 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~-~~~G~~~~i~~D~vv~a~G~--~p~~ 270 (458)
T 1lvl_A 194 GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLRLEADRVLVAVGR--RPRT 270 (458)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCEECCSCEEECCCE--EECC
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEE-ECCCceEEEECCEEEECcCC--CcCC
Confidence 68999999999999999999999999999999999999999999987556665 23463234999999999996 4444
Q ss_pred HHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
..+ ++.+++ +++ +|.||+++|+ +.|+|||+|||+.
T Consensus 271 ~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~ 308 (458)
T 1lvl_A 271 KGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAG 308 (458)
T ss_dssp SSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGC
T ss_pred CCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCC
Confidence 322 345565 445 8999999998 8999999999986
No 61
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-33 Score=283.65 Aligned_cols=264 Identities=16% Similarity=0.225 Sum_probs=178.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhhhc-cccCccccchhHHHHHHhCCCcEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEA 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (547)
.+||+||||||||++||.+|++.|++|+|||+.. .+++.+ .+.++. ......++.........+....+ ....
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 83 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVY-QYGD 83 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEE-EECC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccc-ccee
Confidence 5899999999999999999999999999999863 232221 111111 11111233334444555555222 2233
Q ss_pred EEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHHHccCCC
Q 041537 103 EAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFEKAVLPG 181 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~~~~~~~ 181 (547)
.+...+.....+...+ +. ++.||+||||||++|+.|++||.++.. ..+.... ..+
T Consensus 84 ~~~~~~~~~~~~~~~~----~~---~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~--------~~~--------- 139 (312)
T 4gcm_A 84 IKSVEDKGEYKVINFG----NK---ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCA--------VCD--------- 139 (312)
T ss_dssp CCEEEECSSCEEEECS----SC---EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH--------HHH---------
T ss_pred eeeeeeeecceeeccC----Ce---EEEeceeEEcccCccCcCCCCChhhhCCccEEeee--------ccC---------
Confidence 3444455555554443 33 899999999999999999999976421 1111100 000
Q ss_pred CCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcE
Q 041537 182 LSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 182 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~ 261 (547)
.....+++++|||||++|+|+|..|.++ +.+|+++++.+++++... ...+.+++.++.
T Consensus 140 ---~~~~~~k~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~-----~~~~~~~~~~~~ 197 (312)
T 4gcm_A 140 ---GAFFKNKRLFVIGGGDSAVEEGTFLTKF--------------ADKVTIVHRRDELRAQRI-----LQDRAFKNDKID 197 (312)
T ss_dssp ---GGGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCSCHH-----HHHHHHHCTTEE
T ss_pred ---ccccCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEecccccCcchh-----HHHHHHHhcCcc
Confidence 0112346999999999999999999876 689999999999887532 223566778899
Q ss_pred EEcCceEEEEeC--C---eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC-CCCccEEeCCCCCcCCCCCE
Q 041537 262 VLTECRVVNVSD--K---EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLATNEWLRVKECENV 335 (547)
Q Consensus 262 v~~~~~V~~v~~--~---~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~V 335 (547)
......+..+.. . ........+++...+++|.|++++|. .|+. .+...+++ +++|+|.||+++|| +.|+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~--~~~~-~~~~~~g~~~~~G~I~vd~~~~T-s~pgI 273 (312)
T 4gcm_A 198 FIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM--KPLT-APFKDLGITNDVGYIVTKDDMTT-SVPGI 273 (312)
T ss_dssp EECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE--EESC-GGGGGGTCBCTTSCBCCCTTSBC-SSTTE
T ss_pred eeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCC--CcCc-hhHHhcceecCCCeEeeCCCCcc-CCCCE
Confidence 888877766532 1 12223333455556999999999995 5554 34555666 67889999999999 99999
Q ss_pred EEeCccCc
Q 041537 336 YALGDCAT 343 (547)
Q Consensus 336 faiGD~a~ 343 (547)
||+|||+.
T Consensus 274 yA~GDv~~ 281 (312)
T 4gcm_A 274 FAAGDVRD 281 (312)
T ss_dssp EECSTTBS
T ss_pred EEEeecCC
Confidence 99999985
No 62
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2e-33 Score=301.74 Aligned_cols=267 Identities=14% Similarity=0.166 Sum_probs=192.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC--------CCccCCChhhh------------------h---ccc--
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN--------YFAFTPLLPSV------------------T---CGT-- 76 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~--------~~~~~p~l~~~------------------~---~g~-- 76 (547)
.+||||||||+||+++|.++++.|.+|+|||+.. .++++.+...+ . .|.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 3799999999999999999999999999999753 23332111000 0 010
Q ss_pred ----cCcccc-----------chhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCC
Q 041537 77 ----VEARSI-----------AEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ 141 (547)
Q Consensus 77 ----~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~ 141 (547)
.+...+ ...+...+++.+ |+++++....+++..-.|..... ....+.+.+|++|||||++
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~--V~~i~G~a~f~~~~~v~V~~~~~---~~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSK--VKYINGLAKLKDKNTVSYYLKGD---LSKEETVTGKYILIATGCR 196 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEEEETTEEEEEEC-----CCCEEEEEEEEEEECCCEE
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEcCCCcceEeeccc---CCceEEEeeeeEEeccCCC
Confidence 011111 112334455666 88899999999876434433321 1123589999999999999
Q ss_pred ccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhh
Q 041537 142 VNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINL 220 (547)
Q Consensus 142 ~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~ 220 (547)
|..|+.++.. +..+ +- .+...++.+|. +++|||||++|+|+|..++++
T Consensus 197 P~~P~~~~~~~~~~~---ts-------------~~~l~l~~lP~-------~lvIIGgG~IGlE~A~~~~~l-------- 245 (542)
T 4b1b_A 197 PHIPDDVEGAKELSI---TS-------------DDIFSLKKDPG-------KTLVVGASYVALECSGFLNSL-------- 245 (542)
T ss_dssp ECCCSSSBTHHHHCB---CH-------------HHHTTCSSCCC-------SEEEECCSHHHHHHHHHHHHH--------
T ss_pred CCCCCcccCCCcccc---Cc-------------hhhhccccCCc-------eEEEECCCHHHHHHHHHHHhc--------
Confidence 9888544432 2221 21 22223443443 999999999999999999998
Q ss_pred CCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEcc
Q 041537 221 YPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWST 298 (547)
Q Consensus 221 ~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~ 298 (547)
+.+||++++ +++||.+++++.+.+.+.|++.||++++++.+++++. +.+.+.. .+++. +.+|.|++|+
T Consensus 246 ------G~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~-~~~~~--~~~D~vLvAv 315 (542)
T 4b1b_A 246 ------GYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEF-SDKTS--ELYDTVLYAI 315 (542)
T ss_dssp ------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECS
T ss_pred ------CCeEEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEE-cCCCe--EEEEEEEEcc
Confidence 789999987 5789999999999999999999999999999998854 4555554 33544 8899999999
Q ss_pred CCCCCcchHHH-HHHhCC--CCCc-cEEeCCCCCcCCCCCEEEeCccCc
Q 041537 299 GVGTRPAIKDF-MEQIGQ--GKRR-VLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 299 G~~~~p~~~~l-~~~~~~--~~~g-~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
| +.|+++.| ++.+++ +.++ .|.||+++|| +.|+|||+|||+.
T Consensus 316 G--R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~ 361 (542)
T 4b1b_A 316 G--RKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE 361 (542)
T ss_dssp C--EEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT
T ss_pred c--ccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC
Confidence 9 78888777 555565 4444 4578889998 9999999999975
No 63
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.1e-33 Score=300.18 Aligned_cols=268 Identities=19% Similarity=0.271 Sum_probs=192.7
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC-------C--CCccCCChhh-------------------hh-cc-
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ-------N--YFAFTPLLPS-------------------VT-CG- 75 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~-------~--~~~~~p~l~~-------------------~~-~g- 75 (547)
+..+||+|||||+||+++|..|++.|++|+|||+. . .++++.+... .. .|
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 35689999999999999999999999999999942 1 1222211100 00 00
Q ss_pred ------ccCccccchh-----------HHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEcc
Q 041537 76 ------TVEARSIAEP-----------VRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAV 138 (547)
Q Consensus 76 ------~~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAt 138 (547)
..+...+... +...++..+ ++++.+++..+++....|.+.+ +. +++.||+|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~a~~~~~~~v~v~~~~----g~--~~~~~d~lviAT 158 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKK--VEYINGLGSFVDSHTLLAKLKS----GE--RTITAQTFVIAV 158 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTEEEEECTT----CC--EEEEEEEEEECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEccCCEEEEEeCC----Ce--EEEEcCEEEEeC
Confidence 0111111111 223345555 7888999998886644443322 32 479999999999
Q ss_pred CCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhh
Q 041537 139 GAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLI 218 (547)
Q Consensus 139 G~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~ 218 (547)
|+.|..|++||..++.. +.+++.. +. ...++++|||+|++|+|+|..+.++
T Consensus 159 Gs~p~~p~i~G~~~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~------ 209 (483)
T 3dgh_A 159 GGRPRYPDIPGAVEYGI---TSDDLFS-------------LD-------REPGKTLVVGAGYIGLECAGFLKGL------ 209 (483)
T ss_dssp CEEECCCSSTTHHHHCB---CHHHHTT-------------CS-------SCCCEEEEECCSHHHHHHHHHHHHT------
T ss_pred CCCcCCCCCCCcccccC---cHHHHhh-------------hh-------hcCCcEEEECCCHHHHHHHHHHHHc------
Confidence 99999999999865432 2222111 11 1335999999999999999999986
Q ss_pred hhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce---EEEEeccCCeEEEEeece
Q 041537 219 NLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KE---ITMKIKSTGAVCSIPHGL 293 (547)
Q Consensus 219 ~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~---v~~~~~~~G~~~~i~~D~ 293 (547)
+.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.|++++. ++ +++.+..+|+..++++|.
T Consensus 210 --------g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~ 280 (483)
T 3dgh_A 210 --------GYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDT 280 (483)
T ss_dssp --------TCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESE
T ss_pred --------CCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCE
Confidence 689999998 5788999999999999999999999999999999964 32 444442234444699999
Q ss_pred EEEccCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 294 VLWSTGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 294 vv~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
||+|+|. .|+...+ ++.+++ +. |+|.||+++|| +.|+|||+|||+.
T Consensus 281 vi~a~G~--~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 281 VLWAIGR--KGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY 329 (483)
T ss_dssp EEECSCE--EECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT
T ss_pred EEECccc--ccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC
Confidence 9999995 5555433 255565 45 99999999998 8999999999974
No 64
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.9e-34 Score=301.14 Aligned_cols=261 Identities=21% Similarity=0.294 Sum_probs=193.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh---------------hhc-------cccCcc-
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS---------------VTC-------GTVEAR- 80 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~---------------~~~-------g~~~~~- 80 (547)
++||+|||||++|+++|..|++.|++|+|||+ +.++.+... +. ... ...+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 57999999999999999999999999999999 444332110 00 000 001111
Q ss_pred ----------ccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCcc-CCCCCC
Q 041537 81 ----------SIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVN-TFGTPG 149 (547)
Q Consensus 81 ----------~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~-~~~ipG 149 (547)
.+...+..+++..+ ++++.+++..+++ +.+.+.+ ++. .+.||+||+|||+.|. .|++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~~~---~~~---~~~~d~lviAtG~~p~~~p~i~G 153 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAG--AEILDTRAELAGP--NTVKLLA---SGK---TVTAERIVIAVGGHPSPHDALPG 153 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETT---TTE---EEEEEEEEECCCEEECCCTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeC--CEEEEec---CCe---EEEeCEEEEecCCCcccCCCCCC
Confidence 11122344455556 7788888888764 5777732 133 8999999999999999 899999
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce
Q 041537 150 VLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR 229 (547)
Q Consensus 150 ~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 229 (547)
.+ + +.+.++... +. ...++++|||+|++|+|+|..+..+ +.+
T Consensus 154 ~~-~---~~~~~~~~~-------------~~-------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~~ 195 (463)
T 4dna_A 154 HE-L---CITSNEAFD-------------LP-------ALPESILIAGGGYIAVEFANIFHGL--------------GVK 195 (463)
T ss_dssp GG-G---CBCHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCE
T ss_pred cc-c---cccHHHHhh-------------hh-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CCe
Confidence 74 2 222222211 11 2345999999999999999999876 689
Q ss_pred EEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--e-EEEEeccCCeEEEEeeceEEEccCCCCCcch
Q 041537 230 ITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDK--E-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 230 V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
|+++++.+++++.+++++.+.+.+.|++.||++++++.|++++.+ + +.+....+|+ +++|.||+|+|. .|+.
T Consensus 196 Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G~--~p~~ 270 (463)
T 4dna_A 196 TTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALGR--MPNT 270 (463)
T ss_dssp EEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSCE--EESC
T ss_pred EEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeCc--ccCC
Confidence 999999999999999999999999999999999999999999653 3 3444134464 999999999995 4444
Q ss_pred HHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
..+ ++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 271 ~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 309 (463)
T 4dna_A 271 NGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD 309 (463)
T ss_dssp TTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS
T ss_pred CCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC
Confidence 333 455565 67899999999997 9999999999975
No 65
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.7e-34 Score=303.82 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=192.9
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----hh------------h---hccc------cCccccc
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----PS------------V---TCGT------VEARSIA 83 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~~------------~---~~g~------~~~~~~~ 83 (547)
++|+|||||+||+++|..|++.|++|+|||+++.++++... |. . ..|. .+...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 68999999999999999999999999999999766543211 00 0 0000 0111111
Q ss_pred -----------hhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccc
Q 041537 84 -----------EPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLE 152 (547)
Q Consensus 84 -----------~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e 152 (547)
..+..+++..+ ++++.+++..+++ +.+.+.. . +. ++.||+||+|||++|..|+++|.+.
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~--~~~~v~~-~--g~---~~~~d~lviAtG~~p~~~~~~g~~~ 151 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNG--IARHQGTARFLSE--RKVLVEE-T--GE---ELEARYILIATGSAPLIPPWAQVDY 151 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETT-T--CC---EEEEEEEEECCCEEECCCTTBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEee-C--CE---EEEecEEEECCCCCCCCCCCCCCCc
Confidence 11234555566 6777777776654 4666543 1 33 8999999999999999888888653
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEE
Q 041537 153 NCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITL 232 (547)
Q Consensus 153 ~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~l 232 (547)
. .+.+.+++.. +. ...++++|||||++|+|+|..|.++ +.+|++
T Consensus 152 ~--~v~~~~~~~~-------------~~-------~~~~~vvIiGgG~~g~e~A~~l~~~--------------g~~V~l 195 (455)
T 2yqu_A 152 E--RVVTSTEALS-------------FP-------EVPKRLIVVGGGVIGLELGVVWHRL--------------GAEVIV 195 (455)
T ss_dssp S--SEECHHHHTC-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEE
T ss_pred C--cEechHHhhc-------------cc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CCEEEE
Confidence 1 1223332211 11 1235999999999999999999875 689999
Q ss_pred EecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHH-
Q 041537 233 IQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDF- 309 (547)
Q Consensus 233 v~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l- 309 (547)
+++.++++|.+++.+.+.+.+.+++.||+++++++|++++. +.+.+.. .+|+. +++|.||+|+|.. |+...+
T Consensus 196 v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~~D~vv~A~G~~--p~~~~l~ 270 (455)
T 2yqu_A 196 LEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL-EGGEV--LEADRVLVAVGRR--PYTEGLS 270 (455)
T ss_dssp ECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCEE--ECCTTCC
T ss_pred EecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCCeE--EEcCEEEECcCCC--cCCCCCC
Confidence 99999999999999999999999999999999999999964 4455553 34654 9999999999954 444222
Q ss_pred HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 310 MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 310 ~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 271 ~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~ 305 (455)
T 2yqu_A 271 LENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVR 305 (455)
T ss_dssp GGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSS
T ss_pred hhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCC
Confidence 344555 56788999999998 8999999999975
No 66
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.4e-33 Score=282.39 Aligned_cols=270 Identities=17% Similarity=0.204 Sum_probs=184.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC--------Chhhhh--ccccCccccchhHHHHHHhCCCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP--------LLPSVT--CGTVEARSIAEPVRNIIKKRNAE 96 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p--------~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~ 96 (547)
+++||+|||||||||+||.+|++.|++|+|||++...+..+ .++.++ ....+..++...+...+.+.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~-- 80 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG-- 80 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC--
Confidence 46899999999999999999999999999999875422111 111111 011222345556667777777
Q ss_pred EEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHH
Q 041537 97 IQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFE 175 (547)
Q Consensus 97 v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~ 175 (547)
+.+...++..+....+....... ++. ++.||+||||||+.|+.|++||.+... ..+........
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~--~~~---~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~---------- 145 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTE--EGK---EVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG---------- 145 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEET--TCC---EEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT----------
T ss_pred cEEEEeEEEEeecCCCceEEEEC--CCe---EEEEeEEEEcccccccccCCCccccccccceeeehhhhh----------
Confidence 55666677777665553332221 133 899999999999999999999975321 11111111000
Q ss_pred HccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHH
Q 041537 176 KAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKF 255 (547)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l 255 (547)
.......++++|||||++|+|+|..|.++ +.+|+++++.+..+.. +. ...+.+
T Consensus 146 --------~~~~~~~~~vvViGgG~ig~e~A~~l~~~--------------G~~Vt~v~~~~~~~~~--~~---~~~~~~ 198 (314)
T 4a5l_A 146 --------AVPIFRNKVLMVVGGGDAAMEEALHLTKY--------------GSKVIILHRRDAFRAS--KT---MQERVL 198 (314)
T ss_dssp --------TSGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCSC--HH---HHHHHH
T ss_pred --------hhhhcCCCeEEEECCChHHHHHHHHHHHh--------------CCeeeeeccccccccc--ch---hhhhhh
Confidence 01113457999999999999999999876 6899999998875443 22 233455
Q ss_pred HhCCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcC
Q 041537 256 QRDGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVK 330 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~ 330 (547)
...+++.+..+.+.++... .+.+.+...++.+++++|.|++++| ..|+++.+...+.++++|.+ ||+++||
T Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G--~~pn~~~l~~~~~~~~~G~i-v~~~~~T- 274 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG--HSPNSKFLGGQVKTADDGYI-LTEGPKT- 274 (314)
T ss_dssp TCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESCGGGTTSSCBCTTSCB-CCBTTBC-
T ss_pred cccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc--cccChhHhcccceEcCCeeE-eCCCCcc-
Confidence 6678999999888888542 3555554445555699999999999 56666444222233666755 8899999
Q ss_pred CCCCEEEeCccCcc
Q 041537 331 ECENVYALGDCATI 344 (547)
Q Consensus 331 ~~~~VfaiGD~a~~ 344 (547)
+.|+|||+|||+..
T Consensus 275 s~pgIyA~GDv~~~ 288 (314)
T 4a5l_A 275 SVDGVFACGDVCDR 288 (314)
T ss_dssp SSTTEEECSTTTCS
T ss_pred CCCCEEEEEeccCC
Confidence 99999999999874
No 67
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.3e-33 Score=301.50 Aligned_cols=270 Identities=20% Similarity=0.312 Sum_probs=191.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC------ccCCCh----hh------------h----h-ccc---
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF------AFTPLL----PS------------V----T-CGT--- 76 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~------~~~p~l----~~------------~----~-~g~--- 76 (547)
+.+||+|||||+||+++|..|++.|++|+|||+++.. +.+... |. . . .|.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 3589999999999999999999999999999998632 211000 00 0 0 000
Q ss_pred ---cCccc-----------cchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCc
Q 041537 77 ---VEARS-----------IAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQV 142 (547)
Q Consensus 77 ---~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~ 142 (547)
.+... +...+..+++..+ ++++.+++..+++....|...+ |. ...+.||+||||||+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~----g~-~~~~~~d~lvlAtG~~p 154 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANG--VTLFEGHGKLLAGKKVEVTAAD----GS-SQVLDTENVILASGSKP 154 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESEEEECSTTCEEEECTT----SC-EEEECCSCEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCCEEEEEcCC----Cc-eEEEEcCEEEEcCCCCC
Confidence 00000 0111233445556 7788888888876654554332 31 24899999999999998
Q ss_pred cCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCC
Q 041537 143 NTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYP 222 (547)
Q Consensus 143 ~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 222 (547)
..++.++.... .+.+..++. .+. ...++++|||+|++|+|+|..+.++
T Consensus 155 ~~~~~~~~~~~--~v~~~~~~~-------------~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~---------- 202 (476)
T 3lad_A 155 VEIPPAPVDQD--VIVDSTGAL-------------DFQ-------NVPGKLGVIGAGVIGLELGSVWARL---------- 202 (476)
T ss_dssp CCCTTSCCCSS--SEEEHHHHT-------------SCS-------SCCSEEEEECCSHHHHHHHHHHHHT----------
T ss_pred CCCCCCCCCcc--cEEechhhh-------------ccc-------cCCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 76655543211 111211111 111 2345999999999999999999876
Q ss_pred CCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEecc-CCeEEEEeeceEEEccC
Q 041537 223 TVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKS-TGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 223 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~-~G~~~~i~~D~vv~a~G 299 (547)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+.+...+ +| ..++++|.||+|+|
T Consensus 203 ----g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g-~~~~~~D~vi~a~G 277 (476)
T 3lad_A 203 ----GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEG-EKSQAFDKLIVAVG 277 (476)
T ss_dssp ----TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSE-EEEEEESEEEECSC
T ss_pred ----CCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCC-cEEEECCEEEEeeC
Confidence 68999999999999999999999999999999999999999999974 344433221 23 23599999999999
Q ss_pred CCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 300 VGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 300 ~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
. .|+...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 278 ~--~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 321 (476)
T 3lad_A 278 R--RPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVR 321 (476)
T ss_dssp E--EECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred C--cccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCC
Confidence 5 5555433 444555 66889999999998 8999999999985
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.1e-33 Score=302.46 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=192.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChh----h---------------hh-cc------ccCcc-
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLP----S---------------VT-CG------TVEAR- 80 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~----~---------------~~-~g------~~~~~- 80 (547)
.+||+|||||+||+++|..|++.|++|+|||+. .+++..... . .. .+ ..+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 479999999999999999999999999999994 443321110 0 00 00 00000
Q ss_pred ----------ccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEe-cCCCCCCceeeeecCEEEEccCCCcc-CCCCC
Q 041537 81 ----------SIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCK-SNIDKETRDFSLEYDYLIIAVGAQVN-TFGTP 148 (547)
Q Consensus 81 ----------~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~-~~~~~g~~~~~i~yD~LViAtG~~~~-~~~ip 148 (547)
.+...+..++...+ ++++.+++..++. +.+.+. + +. .+.||+||+|||+.|. .|++|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~v~~~----~~---~~~~d~lviAtG~~p~~~p~i~ 173 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSN--VHIYESRAVFVDE--HTLELSVT----GE---RISAEKILIATGAKIVSNSAIK 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEETTT----CC---EEEEEEEEECCCEEECCC--CB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEecC----Ce---EEEeCEEEEccCCCcccCCCCC
Confidence 11222344556666 7788889989885 467775 2 33 8999999999999998 88999
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc
Q 041537 149 GVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV 228 (547)
Q Consensus 149 G~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 228 (547)
|.. ........ .. +. ...++++|||+|++|+|+|..+.++ +.
T Consensus 174 G~~-~~~~~~~~---~~-------------~~-------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~ 215 (484)
T 3o0h_A 174 GSD-LCLTSNEI---FD-------------LE-------KLPKSIVIVGGGYIGVEFANIFHGL--------------GV 215 (484)
T ss_dssp TGG-GSBCTTTG---GG-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TC
T ss_pred Ccc-ccccHHHH---Hh-------------HH-------hcCCcEEEECcCHHHHHHHHHHHHc--------------CC
Confidence 974 22221111 11 11 2345999999999999999999876 68
Q ss_pred eEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcch
Q 041537 229 RITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 229 ~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
+|+++++.+++++.+++.+.+.+.+.+++.||+++++++|++++. +.+.+.. .+|+. +++|.||+|+|. .|+.
T Consensus 216 ~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vi~A~G~--~p~~ 290 (484)
T 3o0h_A 216 KTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVL-TNGQT--ICADRVMLATGR--VPNT 290 (484)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-TTSCE--EEESEEEECCCE--EECC
T ss_pred eEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEE-CCCcE--EEcCEEEEeeCC--CcCC
Confidence 999999999999999999999999999999999999999999965 3454443 34654 999999999995 4544
Q ss_pred HHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
..+ ++..++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 291 ~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 329 (484)
T 3o0h_A 291 TGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG 329 (484)
T ss_dssp TTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT
T ss_pred CCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 333 455565 67899999999998 9999999999975
No 69
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-33 Score=285.21 Aligned_cols=265 Identities=17% Similarity=0.214 Sum_probs=184.8
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC----C---hhhhhccccCccccchhHHHHHHhCCCcEE
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP----L---LPSVTCGTVEARSIAEPVRNIIKKRNAEIQ 98 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p----~---l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 98 (547)
+++++|+|||||++|+++|..|++.|++|+|||+.. .+... . .+.+. ......++...+.+.+.+.+ ++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~--v~ 87 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFR-NGITGPELMDEMREQALRFG--AD 87 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCT-TCBCHHHHHHHHHHHHHHTT--CE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCC-CCCCHHHHHHHHHHHHHHcC--CE
Confidence 456899999999999999999999999999999752 22111 0 11111 01223445566677777777 56
Q ss_pred EEEEEEEEEECCC-CEE-EEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHH
Q 041537 99 FWEAEAIKIDAAK-NEV-FCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFE 175 (547)
Q Consensus 99 ~~~~~v~~id~~~-~~v-~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~ 175 (547)
++.++++.+++.+ ..| .+.+ +. ++.||+||+|+|+.+..|++||..++. ..+.+... ....
T Consensus 88 ~~~~~v~~i~~~~~~~v~~~~~----g~---~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~------ 151 (335)
T 2a87_A 88 LRMEDVESVSLHGPLKSVVTAD----GQ---THRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDGF------ 151 (335)
T ss_dssp EECCCEEEEECSSSSEEEEETT----SC---EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHGG------
T ss_pred EEEeeEEEEEeCCcEEEEEeCC----CC---EEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cchh------
Confidence 6677799998732 245 4443 43 899999999999999989999865321 01111111 0000
Q ss_pred HccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHH
Q 041537 176 KAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKF 255 (547)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l 255 (547)
....++++|||+|++|+|+|..|.++ +.+|+++++.+.++.. +.+. .+.+
T Consensus 152 -----------~~~~~~v~ViG~G~~g~e~a~~l~~~--------------g~~V~l~~~~~~~~~~--~~~~---~~~~ 201 (335)
T 2a87_A 152 -----------FFRDQDIAVIGGGDSAMEEATFLTRF--------------ARSVTLVHRRDEFRAS--KIML---DRAR 201 (335)
T ss_dssp -----------GGTTCEEEEECSSHHHHHHHHHHTTT--------------CSEEEEECSSSSCSSC--TTHH---HHHH
T ss_pred -----------hcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEcCCcCCcc--HHHH---HHHh
Confidence 12456999999999999999998764 6799999999877532 2221 2345
Q ss_pred HhCCcEEEcCceEEEEeCCe----EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH-HhCCCCCccEEeCCCC-Cc
Q 041537 256 QRDGIEVLTECRVVNVSDKE----ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME-QIGQGKRRVLATNEWL-RV 329 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~-~~~~~~~g~i~Vd~~l-~~ 329 (547)
++.||+++++++|++++.++ +.+.+..+|+..+++||.||||+|+.++ . .++. .+.++.+|+|.||+++ ++
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~--~-~~~~~~l~~~~~G~i~vd~~~~~t 278 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPR--S-GLVREAIDVDPDGYVLVQGRTTST 278 (335)
T ss_dssp HCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEEC--C-TTTBTTBCBCTTSCBCCSTTSSBC
T ss_pred ccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccC--h-hHhhcccccCCCccEEeCCCCCcc
Confidence 67899999999999998754 7776533464445999999999996544 3 2322 2334678999999964 55
Q ss_pred CCCCCEEEeCccCcc
Q 041537 330 KECENVYALGDCATI 344 (547)
Q Consensus 330 ~~~~~VfaiGD~a~~ 344 (547)
+.|+|||+|||+..
T Consensus 279 -~~~~iya~GD~~~~ 292 (335)
T 2a87_A 279 -SLPGVFAAGDLVDR 292 (335)
T ss_dssp -SSTTEEECGGGTCC
T ss_pred -CCCCEEEeeecCCc
Confidence 89999999999863
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.6e-33 Score=286.30 Aligned_cols=271 Identities=15% Similarity=0.196 Sum_probs=185.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcC----CCCCccCCCh-------hhhhccccCccccchhHHHHHHhCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSP----QNYFAFTPLL-------PSVTCGTVEARSIAEPVRNIIKKRNA 95 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~----~~~~~~~p~l-------~~~~~g~~~~~~~~~~~~~~~~~~~~ 95 (547)
++++|+|||||++|+++|..|++.|++|+|||+ ....+..... +.+. ..+...++...+...+.+.+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g- 84 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFP-EGILGVELTDKFRKQSERFG- 84 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCT-TCEEHHHHHHHHHHHHHHTT-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCc-cCCCHHHHHHHHHHHHHHCC-
Confidence 357999999999999999999999999999998 3222211100 0110 01122345556677777777
Q ss_pred cEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc--cccCCHHHHHHHHHHHHHH
Q 041537 96 EIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC--HFLKELEDAQKIRRTVTDC 173 (547)
Q Consensus 96 ~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~--~~~~~~~~a~~l~~~l~~~ 173 (547)
++++.++|+.++.+.+.+.+.. . +. .+.||+||+|+|+.+..|++||..+.. +....+.........+
T Consensus 85 -v~~~~~~v~~i~~~~~~~~v~~-~--~~---~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--- 154 (333)
T 1vdc_A 85 -TTIFTETVTKVDFSSKPFKLFT-D--SK---AILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAA--- 154 (333)
T ss_dssp -CEEECCCCCEEECSSSSEEEEC-S--SE---EEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTS---
T ss_pred -CEEEEeEEEEEEEcCCEEEEEE-C--Cc---EEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccch---
Confidence 5666677999998776443332 1 43 899999999999999999999876421 1111111111111000
Q ss_pred HHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHH
Q 041537 174 FEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEK 253 (547)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~ 253 (547)
.....++|+|||+|++|+|+|..|.+. +.+|+++++.+.+.. .+.+ ..+
T Consensus 155 ------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~--~~~~---~~~ 203 (333)
T 1vdc_A 155 ------------PIFRNKPLAVIGGGDSAMEEANFLTKY--------------GSKVYIIHRRDAFRA--SKIM---QQR 203 (333)
T ss_dssp ------------GGGTTSEEEEECCSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS--CHHH---HHH
T ss_pred ------------hhcCCCeEEEECCChHHHHHHHHHHhc--------------CCeEEEEecCCcCCc--cHHH---HHH
Confidence 013456999999999999999998764 679999999987643 2222 224
Q ss_pred HHHhCCcEEEcCceEEEEeCCe-------EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH-HhCCCCCccEEeCC
Q 041537 254 KFQRDGIEVLTECRVVNVSDKE-------ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME-QIGQGKRRVLATNE 325 (547)
Q Consensus 254 ~l~~~GV~v~~~~~V~~v~~~~-------v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~-~~~~~~~g~i~Vd~ 325 (547)
.+++.||+++++++|++++.+. +.+.+..+|+..+++||.||||+|+.++ . .++. .+.++.+|+|.||+
T Consensus 204 ~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~--~-~~~~~~l~~~~~G~i~vd~ 280 (333)
T 1vdc_A 204 ALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA--T-KFLDGGVELDSDGYVVTKP 280 (333)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES--C-GGGTTSSCBCTTSCBCCCT
T ss_pred HHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc--h-HHhhccccccCCCCEEech
Confidence 4567899999999999997542 6666433465456999999999996544 3 2322 23336689999999
Q ss_pred CC-CcCCCCCEEEeCccCcc
Q 041537 326 WL-RVKECENVYALGDCATI 344 (547)
Q Consensus 326 ~l-~~~~~~~VfaiGD~a~~ 344 (547)
++ ++ +.|+|||+|||+..
T Consensus 281 ~~~~t-~~~~vya~GD~~~~ 299 (333)
T 1vdc_A 281 GTTQT-SVPGVFAAGDVQDK 299 (333)
T ss_dssp TSCBC-SSTTEEECGGGGCS
T ss_pred hhccc-CCCCEEEeeeccCC
Confidence 74 65 89999999999863
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.3e-33 Score=300.26 Aligned_cols=264 Identities=17% Similarity=0.253 Sum_probs=189.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh----h------------------hh--hcc--ccCccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL----P------------------SV--TCG--TVEARS 81 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l----~------------------~~--~~g--~~~~~~ 81 (547)
.+||+|||||+||+++|..|++.|++|+|||++. ++++.+. | .+ ..+ ..+..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999975 4432210 0 00 000 011111
Q ss_pred cchhHHH-----------HHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCc
Q 041537 82 IAEPVRN-----------IIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGV 150 (547)
Q Consensus 82 ~~~~~~~-----------~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~ 150 (547)
+...++. .+.... .+.++.+++..++. ++|.+.+ +. ++.||+||||||++|..|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~g~a~~~~~--~~v~~~~----~~---~~~~d~lViATGs~p~~p~~~~~ 156 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFD-EQDKIRGFAKFLDE--HTLQVDD----HS---QVIAKRIVIATGSRPNYPEFLAA 156 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC-GGGEEESCEEEEET--TEEEETT----TE---EEEEEEEEECCCEECCCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CeeEEEEEEEEecC--CEEEEcC----Cc---EEEeCEEEEccCCCCcCCCCCCc
Confidence 2222211 112221 24467777777764 5777754 33 89999999999999988876553
Q ss_pred c-ccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce
Q 041537 151 L-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR 229 (547)
Q Consensus 151 ~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 229 (547)
. ++ +.+.++... +. ...++++|||||++|+|+|..|.++ +.+
T Consensus 157 ~~~~---v~t~~~~~~-------------~~-------~~~k~vvViGgG~ig~E~A~~l~~~--------------g~~ 199 (492)
T 3ic9_A 157 AGSR---LLTNDNLFE-------------LN-------DLPKSVAVFGPGVIGLELGQALSRL--------------GVI 199 (492)
T ss_dssp TGGG---EECHHHHTT-------------CS-------SCCSEEEEESSCHHHHHHHHHHHHT--------------TCE
T ss_pred cCCc---EEcHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc--------------CCe
Confidence 2 22 222222111 11 2346999999999999999999986 689
Q ss_pred EEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEec-cCCeEEEEeeceEEEccCCCCCcch
Q 041537 230 ITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIK-STGAVCSIPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 230 V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~~D~vv~a~G~~~~p~~ 306 (547)
|+++++.+++++.+++++.+.+.+.|++. |++++++.|++++. +.+.+... .+|+..++++|.||+|+|. .|+.
T Consensus 200 Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~--~p~~ 276 (492)
T 3ic9_A 200 VKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR--KANV 276 (492)
T ss_dssp EEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC--EESC
T ss_pred EEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC--ccCC
Confidence 99999999999999999999999999998 99999999999964 44555432 2474446999999999995 4555
Q ss_pred HHH-HHHhCC--CCCccEEeC-CCCCcCCCCCEEEeCccCc
Q 041537 307 KDF-MEQIGQ--GKRRVLATN-EWLRVKECENVYALGDCAT 343 (547)
Q Consensus 307 ~~l-~~~~~~--~~~g~i~Vd-~~l~~~~~~~VfaiGD~a~ 343 (547)
..+ ++.+++ +.+|+|.|| +++|| +.|+|||+|||+.
T Consensus 277 ~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~ 316 (492)
T 3ic9_A 277 DKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANN 316 (492)
T ss_dssp SSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGT
T ss_pred CCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCC
Confidence 333 455565 678999999 89999 8999999999975
No 72
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.3e-32 Score=299.77 Aligned_cols=270 Identities=17% Similarity=0.248 Sum_probs=190.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC-CC-------CccCCC----hhhh----------------hccc-
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ-NY-------FAFTPL----LPSV----------------TCGT- 76 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~-~~-------~~~~p~----l~~~----------------~~g~- 76 (547)
..++||+|||||+||+++|.+|++.|++|+|||+. +. ++++.+ .|.. ..|.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999973 21 221100 0100 0010
Q ss_pred -------cCccccchhH-----------HHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEcc
Q 041537 77 -------VEARSIAEPV-----------RNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAV 138 (547)
Q Consensus 77 -------~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAt 138 (547)
.+...+...+ +..++..+ ++++.+.+..+++. .+.+.+.. |. ..++.||+|||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~~~~~~~~~~~~--~v~v~~~~--g~-~~~~~~d~lviAt 257 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ--VTYLNAKGRLISPH--EVQITDKN--QK-VSTITGNKIILAT 257 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETT--EEEEECTT--CC-EEEEEEEEEEECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCC--cEEEEEEEEEcCCC--EEEEEeCC--CC-eEEEEeCEEEEeC
Confidence 0001111111 22244555 77888888888865 45443311 31 2379999999999
Q ss_pred CCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhh
Q 041537 139 GAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLI 218 (547)
Q Consensus 139 G~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~ 218 (547)
|++|+.|++||..++.. +.+++. .+. ...++++|||||++|+|+|..|.++
T Consensus 258 Gs~p~~p~i~G~~~~~~---~~~~~~-------------~~~-------~~~~~vvViGgG~~g~E~A~~l~~~------ 308 (598)
T 2x8g_A 258 GERPKYPEIPGAVEYGI---TSDDLF-------------SLP-------YFPGKTLVIGASYVALECAGFLASL------ 308 (598)
T ss_dssp CEEECCCSSTTHHHHCE---EHHHHT-------------TCS-------SCCCSEEEECCSHHHHHHHHHHHHT------
T ss_pred CCCCCCCCCCCcccceE---cHHHHh-------------hCc-------cCCCEEEEECCCHHHHHHHHHHHHc------
Confidence 99999999999754322 111111 111 2335899999999999999999986
Q ss_pred hhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEe--------C---CeEEEEe-ccCCeE
Q 041537 219 NLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVS--------D---KEITMKI-KSTGAV 286 (547)
Q Consensus 219 ~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--------~---~~v~~~~-~~~G~~ 286 (547)
+.+|+++++. .+++.+++++.+.+.+.|++.||++++++.+++++ + +.+.+.. ..+|++
T Consensus 309 --------g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~ 379 (598)
T 2x8g_A 309 --------GGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKK 379 (598)
T ss_dssp --------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCE
T ss_pred --------CCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcE
Confidence 6799999998 78899999999999999999999999999887773 2 3444331 235765
Q ss_pred EEEeeceEEEccCCCCCcchHHH-HHHhCC--CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 287 CSIPHGLVLWSTGVGTRPAIKDF-MEQIGQ--GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 287 ~~i~~D~vv~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
.++++|.||||+|+ .|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 380 ~~~~~D~vi~a~G~--~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~ 436 (598)
T 2x8g_A 380 FEEEFETVIFAVGR--EPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINA 436 (598)
T ss_dssp EEEEESEEEECSCE--EECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred EeccCCEEEEEeCC--ccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecC
Confidence 45669999999995 5555433 345555 57789999999998 8999999999964
No 73
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.98 E-value=1.4e-31 Score=288.16 Aligned_cols=266 Identities=17% Similarity=0.284 Sum_probs=189.9
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC----hhhhhc-cccCccccchhHHHHHHhCCCcEEEE
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL----LPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFW 100 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~----l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~ 100 (547)
...++|+|||||+||+++|.+|++.|++|+|||++. +.... ...+.. .......+...+...+++.+ ++++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g--v~v~ 285 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--GGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYD--VDVI 285 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--TGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSC--EEEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--CCcccccccccccCCCCCCCHHHHHHHHHHHHHHcC--CEEE
Confidence 346799999999999999999999999999999742 22111 111110 11122345556677777777 6777
Q ss_pred EE-EEEEEECC-----CCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHH
Q 041537 101 EA-EAIKIDAA-----KNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCF 174 (547)
Q Consensus 101 ~~-~v~~id~~-----~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~ 174 (547)
.+ +|+.++++ ...|.+.+ |. ++.||+||+|||+.+..+++||..++.. +.+.
T Consensus 286 ~~~~v~~i~~~~~~~~~~~V~~~~----g~---~~~~d~vVlAtG~~~~~~~ipG~~~~~~--~~v~------------- 343 (521)
T 1hyu_A 286 DSQSASKLVPAATEGGLHQIETAS----GA---VLKARSIIIATGAKWRNMNVPGEDQYRT--KGVT------------- 343 (521)
T ss_dssp CSCCEEEEECCSSTTSCEEEEETT----SC---EEEEEEEEECCCEEECCCCCTTTTTTTT--TTEE-------------
T ss_pred cCCEEEEEEeccCCCceEEEEECC----CC---EEEcCEEEECCCCCcCCCCCCChhhhcC--ceEE-------------
Confidence 66 89999864 23565554 44 8999999999999999889999754210 0000
Q ss_pred HHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHH
Q 041537 175 EKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKK 254 (547)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~ 254 (547)
..+... .....+++|+|||+|++|+|+|..|+.. +.+|+++++.+.+++. +.+.+.
T Consensus 344 ---~~~~~~-~~~~~~k~V~ViGgG~~g~E~A~~L~~~--------------g~~Vtlv~~~~~l~~~------~~l~~~ 399 (521)
T 1hyu_A 344 ---YCPHCD-GPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMKAD------QVLQDK 399 (521)
T ss_dssp ---CCTTCC-GGGGBTSEEEEECCSHHHHHHHHHHHHH--------------BSEEEEECSSSSCCSC------HHHHHH
T ss_pred ---EeecCc-hhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCcccCcC------HHHHHH
Confidence 000000 1123567999999999999999999886 5799999999887642 345666
Q ss_pred HHh-CCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCC
Q 041537 255 FQR-DGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLR 328 (547)
Q Consensus 255 l~~-~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~ 328 (547)
|++ .||++++++.++++.++ ++.+.+..+|+..++++|.|+||+|. .|+...+...+.++.+|+|.||+++|
T Consensus 400 l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~pn~~~l~~~l~~~~~G~I~Vd~~~~ 477 (521)
T 1hyu_A 400 VRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL--LPNTHWLEGALERNRMGEIIIDAKCE 477 (521)
T ss_dssp HTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE--EESCGGGTTTSCBCTTSCBCCCTTCB
T ss_pred HhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC--CCCchHHhhhhccCCCCcEEeCCCCC
Confidence 777 69999999999999753 35555534576557999999999995 44443332223446789999999999
Q ss_pred cCCCCCEEEeCccCcc
Q 041537 329 VKECENVYALGDCATI 344 (547)
Q Consensus 329 ~~~~~~VfaiGD~a~~ 344 (547)
| +.|+|||+|||+..
T Consensus 478 t-s~p~VfA~GD~~~~ 492 (521)
T 1hyu_A 478 T-SVKGVFAAGDCTTV 492 (521)
T ss_dssp C-SSTTEEECSTTBCC
T ss_pred C-CCCCEEEeecccCC
Confidence 8 89999999999864
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.98 E-value=4.9e-32 Score=277.13 Aligned_cols=263 Identities=15% Similarity=0.151 Sum_probs=178.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC------------CChhhhhccc---------cCccccchh
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT------------PLLPSVTCGT---------VEARSIAEP 85 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~------------p~l~~~~~g~---------~~~~~~~~~ 85 (547)
++++|+|||||++|+++|..|++.|++|+|||+++.++.. +.......+. .....+...
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 3579999999999999999999999999999998765322 1000000110 011345556
Q ss_pred HHHHHHhCCCcEEEEEEEEEEEECCCCEEE-EecCCCCCCceeeeecCEEEEccCC--CccCCCCCCcccccc-ccCCHH
Q 041537 86 VRNIIKKRNAEIQFWEAEAIKIDAAKNEVF-CKSNIDKETRDFSLEYDYLIIAVGA--QVNTFGTPGVLENCH-FLKELE 161 (547)
Q Consensus 86 ~~~~~~~~~~~v~~~~~~v~~id~~~~~v~-~~~~~~~g~~~~~i~yD~LViAtG~--~~~~~~ipG~~e~~~-~~~~~~ 161 (547)
+..++++.++.+. ...+|+.++.+++.+. +... +. ++.||+||+|+|. .+..|.+||..+... .+....
T Consensus 82 l~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~v~~~---~g---~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~ 154 (357)
T 4a9w_A 82 LAQYEQKYALPVL-RPIRVQRVSHFGERLRVVARD---GR---QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAH 154 (357)
T ss_dssp HHHHHHHTTCCEE-CSCCEEEEEEETTEEEEEETT---SC---EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGG
T ss_pred HHHHHHHcCCEEE-cCCEEEEEEECCCcEEEEEeC---CC---EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEecc
Confidence 6777778885543 3568999998888765 5542 22 8999999999995 666788998754210 000000
Q ss_pred HHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecC-CccC
Q 041537 162 DAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSG-DHIL 240 (547)
Q Consensus 162 ~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~il 240 (547)
.........++|+|||+|++|+|+|..|.+. + +|+++++. +.++
T Consensus 155 --------------------~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~--------------~-~v~~v~~~~~~~~ 199 (357)
T 4a9w_A 155 --------------------YSTPAPFAGMRVAIIGGGNSGAQILAEVSTV--------------A-ETTWITQHEPAFL 199 (357)
T ss_dssp --------------------CCCSGGGTTSEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSCCCBC
T ss_pred --------------------CCChhhcCCCEEEEECCCcCHHHHHHHHHhh--------------C-CEEEEECCCCeec
Confidence 0001113457999999999999999999864 3 69999988 5666
Q ss_pred Ccc--cHHHHHHHHHHHH----------------------------hCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEe
Q 041537 241 NSF--DERISSFAEKKFQ----------------------------RDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIP 290 (547)
Q Consensus 241 ~~~--~~~~~~~~~~~l~----------------------------~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~ 290 (547)
|.. +..+.+.+.+.+. +.|+ +..+..+.+++.+++.+.+ |++ ++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~---g~~--i~ 273 (357)
T 4a9w_A 200 ADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWAD---GTE--RA 273 (357)
T ss_dssp CTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTT---SCE--EE
T ss_pred chhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECC---CCE--ec
Confidence 642 3444443333333 4555 5667778888888877654 765 99
Q ss_pred eceEEEccCCCCCcchHHHHHHhCC-CCCccEEeCCC--CCcCCCCCEEEeCcc
Q 041537 291 HGLVLWSTGVGTRPAIKDFMEQIGQ-GKRRVLATNEW--LRVKECENVYALGDC 341 (547)
Q Consensus 291 ~D~vv~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~--l~~~~~~~VfaiGD~ 341 (547)
+|+||||+|+.++ . .+++++++ +.+|+|.||++ +++ +.|+|||+|||
T Consensus 274 ~D~vi~a~G~~p~--~-~~l~~~gl~~~~G~i~vd~~~l~~t-~~~~vya~Gd~ 323 (357)
T 4a9w_A 274 FDAVIWCTGFRPA--L-SHLKGLDLVTPQGQVEVDGSGLRAL-AVPSVWLLGYG 323 (357)
T ss_dssp CSEEEECCCBCCC--C-GGGTTTTCBCTTSCBCBCTTSCBBS-SCTTEEECSSC
T ss_pred CCEEEECCCcCCC--C-cccCcccccCCCCCccccCCcccCC-CCCCeEEeccc
Confidence 9999999997554 3 34455666 67789999998 665 99999999954
No 75
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.98 E-value=2.3e-32 Score=288.77 Aligned_cols=273 Identities=14% Similarity=0.194 Sum_probs=181.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
.+.++|+|||||+|||++|..|++.|++|+|||+++.+++. +.+.++ +...+.++.....++++..+ ++|+.+...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~-l~~gip-~~~~~~~~~~~~~~~l~~~g--v~~~~~~~v 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL-LVYGIP-GFKLEKSVVERRVKLLADAG--VIYHPNFEV 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH-HHHTSC-TTTSCHHHHHHHHHHHHHTT--CEEETTCCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe-eeecCC-CccCCHHHHHHHHHHHHHCC--cEEEeCCEe
Confidence 45689999999999999999999999999999999876542 112221 11123445566677788887 555443321
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCC-ccCCCCCCccccccccCCHHHHHHHHHHHHHH-HHHccCCCCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ-VNTFGTPGVLENCHFLKELEDAQKIRRTVTDC-FEKAVLPGLS 183 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~-~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~-~~~~~~~~~~ 183 (547)
.+.+.+++ ..+.||+||||||+. ++.+++||.+.. .+.+ +..+....... +... .+...
T Consensus 196 -----~~~v~~~~--------~~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~---a~~~l~~~~~~~~~~~-~~~~~ 256 (456)
T 2vdc_G 196 -----GRDASLPE--------LRRKHVAVLVATGVYKARDIKAPGSGLG--NIVA---ALDYLTTSNKVSLGDT-VEAYE 256 (456)
T ss_dssp -----TTTBCHHH--------HHSSCSEEEECCCCCEECCTTCSCCTTT--TEEE---HHHHHHHHHHHHCTTT-CSSCC
T ss_pred -----ccEEEhhH--------hHhhCCEEEEecCCCCCCCCCCCCCcCC--CcEE---HHHHHHHhhhhhcccc-ccccc
Confidence 12233222 146799999999996 677889986421 1111 22221111111 1100 00000
Q ss_pred H-HHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc-eEEEEecCCcc-CCcccHHHHHHHHHHHHhCCc
Q 041537 184 E-EERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV-RITLIQSGDHI-LNSFDERISSFAEKKFQRDGI 260 (547)
Q Consensus 184 ~-~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~i-l~~~~~~~~~~~~~~l~~~GV 260 (547)
. .....+++|+|||||++|+|+|..+.+. +. +|+++++.+.. +|..+.+ .+.+++.||
T Consensus 257 ~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~--------------Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv 317 (456)
T 2vdc_G 257 NGSLNAAGKHVVVLGGGDTAMDCVRTAIRQ--------------GATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGV 317 (456)
T ss_dssp TTCSCCCCSEEEEECSSHHHHHHHHHHHHT--------------TCSEEEEECSSCSTTCSSCHHH-----HHHHHHTTC
T ss_pred ccccccCCCEEEEECCChhHHHHHHHHHHc--------------CCCEEEEEEeCCccCCCCCHHH-----HHHHHHCCC
Confidence 0 0114568999999999999999988775 44 69999999876 6765543 356788899
Q ss_pred EEEcCceEEEEeCCe----EEEEec------c---------CCeEEEEeeceEEEccCCCCCcchHH-HHHHhCC--CCC
Q 041537 261 EVLTECRVVNVSDKE----ITMKIK------S---------TGAVCSIPHGLVLWSTGVGTRPAIKD-FMEQIGQ--GKR 318 (547)
Q Consensus 261 ~v~~~~~V~~v~~~~----v~~~~~------~---------~G~~~~i~~D~vv~a~G~~~~p~~~~-l~~~~~~--~~~ 318 (547)
++++++.++++.+++ +.+... . +|+..++++|+||+|+|+.+++ .. ++..+++ +.+
T Consensus 318 ~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~--~~~~l~~~gl~~~~~ 395 (456)
T 2vdc_G 318 EFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPED--LPNAFDEPELKVTRW 395 (456)
T ss_dssp EEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCC--HHHHHHSTTSCBCTT
T ss_pred EEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCc--chhhcccCCeeECCC
Confidence 999999988886532 233210 1 2444569999999999974433 22 4555565 678
Q ss_pred ccEEeCCC-CCcCCCCCEEEeCccCc
Q 041537 319 RVLATNEW-LRVKECENVYALGDCAT 343 (547)
Q Consensus 319 g~i~Vd~~-l~~~~~~~VfaiGD~a~ 343 (547)
|+|.||++ +|| +.|+|||+|||+.
T Consensus 396 G~i~vd~~~~~T-s~~~VfA~GD~~~ 420 (456)
T 2vdc_G 396 GTLLVDHRTKMT-NMDGVFAAGDIVR 420 (456)
T ss_dssp SSBCCCTTTCBC-SSTTEEECGGGGS
T ss_pred CCEEECCCCCcC-CCCCEEEeccccC
Confidence 99999997 997 8999999999976
No 76
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.98 E-value=2.3e-32 Score=274.40 Aligned_cols=263 Identities=15% Similarity=0.196 Sum_probs=171.4
Q ss_pred CCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC-CChhhhhc-cccCccccchhHHHHHHhCCCcEEEEEE
Q 041537 25 EREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT-PLLPSVTC-GTVEARSIAEPVRNIIKKRNAEIQFWEA 102 (547)
Q Consensus 25 ~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~-p~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (547)
.|+.+||+|||||||||+||.+|++.|++|+|||++..-+.. ...+.+.. ....+.++.......+.+++ .+.+...
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYP-SVHYYEK 81 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTST-TEEEEEC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcC-CEEEEee
Confidence 356789999999999999999999999999999987532110 01111111 11222333333344444444 3667777
Q ss_pred EEEEEECCCC---EEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccc-cccCCHHHHHHHHHHHHHHHHHcc
Q 041537 103 EAIKIDAAKN---EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENC-HFLKELEDAQKIRRTVTDCFEKAV 178 (547)
Q Consensus 103 ~v~~id~~~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~-~~~~~~~~a~~l~~~l~~~~~~~~ 178 (547)
.+..++.... ++.+.+ +. ++.||+||||||++|+.|++||.++.. ..+..... .+
T Consensus 82 ~~~~~~~~~~~~~~v~~~~----g~---~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~--------~~------ 140 (304)
T 4fk1_A 82 TVVMITKQSTGLFEIVTKD----HT---KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPY--------CD------ 140 (304)
T ss_dssp CEEEEEECTTSCEEEEETT----CC---EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHH--------HH------
T ss_pred EEEEeeecCCCcEEEEECC----CC---EEEeCEEEEccCCccccccccCccccccceeeeccc--------cc------
Confidence 7777754332 455544 44 899999999999999999999975321 00111000 00
Q ss_pred CCCCCHHHHhccccEEEEcCChh-HHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHh
Q 041537 179 LPGLSEEERKRNLHFVIVGGGPT-GVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQR 257 (547)
Q Consensus 179 ~~~~~~~~~~~~~~vvVVGgG~~-gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~ 257 (547)
....+.++++|||||.. ++|+|..+..+ +.+|+++++.+.+. +...+.|++
T Consensus 141 ------~~~~~~~~~~VIggG~~~~~e~a~~~~~~--------------~~~v~i~~~~~~~~--------~~~~~~l~~ 192 (304)
T 4fk1_A 141 ------GWELKDQPLIIISENEDHTLHMTKLVYNW--------------STDLVIATNGNELS--------QTIMDELSN 192 (304)
T ss_dssp ------SGGGTTSCEEEECCSHHHHHHHHHHHTTT--------------CSCEEEECSSCCCC--------HHHHHHHHT
T ss_pred ------hhHhcCCceeeecCCCchhhhHHHHHHhC--------------CceEEEEeccccch--------hhhhhhhhc
Confidence 00123457888888865 56777666544 67899998876543 334567889
Q ss_pred CCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCC
Q 041537 258 DGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECE 333 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~ 333 (547)
.|+++++++ ++++..+ .+......+|++ +++|.+|+++|..+ |+ .++.++++ +++|+|.||+++|| +.|
T Consensus 193 ~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~--i~~~~~vi~~g~~~-~~--~~~~~~g~~~~~~G~I~vd~~~~T-s~p 265 (304)
T 4fk1_A 193 KNIPVITES-IRTLQGEGGYLKKVEFHSGLR--IERAGGFIVPTFFR-PN--QFIEQLGCELQSNGTFVIDDFGRT-SEK 265 (304)
T ss_dssp TTCCEECSC-EEEEESGGGCCCEEEETTSCE--ECCCEEEECCEEEC-SS--CHHHHTTCCCCTTSSSCSSTTCBC-SST
T ss_pred cceeEeeee-EEEeecCCCeeeeeeccccce--eeecceeeeecccc-CC--hhhhhcCeEECCCCCEEECcCCcc-CCC
Confidence 999999875 6777653 232222345775 88888888777533 22 34566665 67899999999999 999
Q ss_pred CEEEeCccCcc
Q 041537 334 NVYALGDCATI 344 (547)
Q Consensus 334 ~VfaiGD~a~~ 344 (547)
+|||+|||+..
T Consensus 266 ~IyA~GDv~~~ 276 (304)
T 4fk1_A 266 NIYLAGETTTQ 276 (304)
T ss_dssp TEEECSHHHHT
T ss_pred CEEEEeccCCC
Confidence 99999999863
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.98 E-value=4.2e-31 Score=272.17 Aligned_cols=266 Identities=17% Similarity=0.235 Sum_probs=178.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCCCCcc------------CCChhhhhccc-----------------
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQNYFAF------------TPLLPSVTCGT----------------- 76 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~~~~~------------~p~l~~~~~g~----------------- 76 (547)
++++|+|||||++|+++|..|++.|+ +|+|||+++ .+. .+.......+.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 35799999999999999999999999 999999986 211 11111101110
Q ss_pred ---cCccccchhHHHHHHhCCCcEEEEE-EEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccc
Q 041537 77 ---VEARSIAEPVRNIIKKRNAEIQFWE-AEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLE 152 (547)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e 152 (547)
.....+...+..++++.+ ++++. .+|+.+++++..+.+... +. ++.||+||+|+|+.+. |.+|+ +
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~g--v~i~~~~~v~~i~~~~~~~~v~~~---~g---~~~~d~vVlAtG~~~~-p~ip~--~ 150 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYE--LNIFENTVVTNISADDAYYTIATT---TE---TYHADYIFVATGDYNF-PKKPF--K 150 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTT--CEEECSCCEEEEEECSSSEEEEES---SC---CEEEEEEEECCCSTTS-BCCCS--S
T ss_pred ccCCCHHHHHHHHHHHHHHcC--CeEEeCCEEEEEEECCCeEEEEeC---CC---EEEeCEEEECCCCCCc-cCCCC--C
Confidence 111223344566667777 44444 578889876543333221 12 6899999999999865 56776 2
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEE
Q 041537 153 NCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITL 232 (547)
Q Consensus 153 ~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~l 232 (547)
......... .......++|+|||+|++|+|+|..|.+. +.+|++
T Consensus 151 ~~~~~~~~~----------------------~~~~~~~~~vvVvG~G~~g~e~a~~l~~~--------------g~~V~l 194 (369)
T 3d1c_A 151 YGIHYSEIE----------------------DFDNFNKGQYVVIGGNESGFDAAYQLAKN--------------GSDIAL 194 (369)
T ss_dssp SCEEGGGCS----------------------CGGGSCSSEEEEECCSHHHHHHHHHHHHT--------------TCEEEE
T ss_pred ceechhhcC----------------------ChhhcCCCEEEEECCCcCHHHHHHHHHhc--------------CCeEEE
Confidence 221111100 00112456999999999999999999875 579999
Q ss_pred EecCCccCC-------cccHHHHHHHHHHHHhCC-cEEEcCceEEEE--eCCeEEEEeccCCeEEEEeeceEEEccCCCC
Q 041537 233 IQSGDHILN-------SFDERISSFAEKKFQRDG-IEVLTECRVVNV--SDKEITMKIKSTGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 233 v~~~~~il~-------~~~~~~~~~~~~~l~~~G-V~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~ 302 (547)
+++.+.+++ .+++.+.+.+.+.|++.| |++++++.|.++ +++.+.+.. .+|+. ...+|.||||+|+.+
T Consensus 195 v~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~-~~g~~-~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 195 YTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISF-DSGQS-VHTPHEPILATGFDA 272 (369)
T ss_dssp ECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEE-SSSCC-EEESSCCEECCCBCG
T ss_pred EecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEe-cCCeE-eccCCceEEeeccCC
Confidence 999998874 256788889999999997 999999999999 555544433 34764 234699999999644
Q ss_pred CcchHHHHHHhCC-CCCccEEeCCCCCcCCCCCEEEeCccCccC
Q 041537 303 RPAIKDFMEQIGQ-GKRRVLATNEWLRVKECENVYALGDCATID 345 (547)
Q Consensus 303 ~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 345 (547)
+.+.+. +.++ +.+|++.||++++.+++|+|||+|||+..+
T Consensus 273 --~~~~~~-~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~ 313 (369)
T 3d1c_A 273 --TKNPIV-QQLFVTTNQDIKLTTHDESTRYPNIFMIGATVEND 313 (369)
T ss_dssp --GGSHHH-HHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCS
T ss_pred --ccchhh-hhhccCCCCCEEechhhcccCCCCeEEeccccccC
Confidence 442232 2223 677889999975555999999999999754
No 78
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=9.1e-31 Score=291.16 Aligned_cols=272 Identities=15% Similarity=0.147 Sum_probs=194.7
Q ss_pred cccccCCCCCCCCC-----CCCCCCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCcc
Q 041537 6 AYSESQSEPGSPAS-----EHGEKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEAR 80 (547)
Q Consensus 6 ~~~~~~~~~~~~~~-----~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~ 80 (547)
..|..+|....... ...++...+++|||||||+|||++|+.|++.|++|+|||+++.++++........+..+..
T Consensus 364 ~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~ 443 (690)
T 3k30_A 364 IRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWG 443 (690)
T ss_dssp CCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGG
T ss_pred ccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHH
Confidence 45667776554332 1123445678999999999999999999999999999999998877655555555555556
Q ss_pred ccchhHHHHHHhC-CCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCc--------cCCCCCCcc
Q 041537 81 SIAEPVRNIIKKR-NAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQV--------NTFGTPGVL 151 (547)
Q Consensus 81 ~~~~~~~~~~~~~-~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~--------~~~~ipG~~ 151 (547)
++...+...+.+. + +++..+ ..+...+ + .++.||+||+|||+.+ ..|++||.+
T Consensus 444 ~~~~~~~~~~~~~~g--v~~~~~---------~~v~~~~----~---~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~ 505 (690)
T 3k30_A 444 RVKEYREAVLAELPN--VEIYRE---------SPMTGDD----I---VEFGFEHVITATGATWRTDGVARFHTTALPIAE 505 (690)
T ss_dssp HHHHHHHHHHHTCTT--EEEESS---------CCCCHHH----H---HHTTCCEEEECCCEEECSSCCSSSCSSCCCBCT
T ss_pred HHHHHHHHHHHHcCC--CEEEEC---------CeecHHH----H---hhcCCCEEEEcCCCccccccccccCCCCCCCCC
Confidence 6666777777766 5 554332 1232222 1 2689999999999984 467788865
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEc--CChhHHHHHHHHHHHHHHhhhhhCCCCCCCce
Q 041537 152 ENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVG--GGPTGVEFAAELHDYIQEDLINLYPTVKDLVR 229 (547)
Q Consensus 152 e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 229 (547)
.. .+.+..+... . . ...+++|+||| +|++|+|+|..|.+. +.+
T Consensus 506 ~~--~v~~~~~~l~----------~-~--------~~~g~~VvViG~ggG~~g~e~A~~L~~~--------------g~~ 550 (690)
T 3k30_A 506 GM--QVLGPDDLFA----------G-R--------LPDGKKVVVYDDDHYYLGGVVAELLAQK--------------GYE 550 (690)
T ss_dssp TS--EEECHHHHHT----------T-C--------CCSSSEEEEEECSCSSHHHHHHHHHHHT--------------TCE
T ss_pred CC--cEEcHHHHhC----------C-C--------CCCCCEEEEEcCCCCccHHHHHHHHHhC--------------CCe
Confidence 21 1222222111 0 0 13456899999 999999999999876 679
Q ss_pred EEEEecCCccCCccc-HHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHH
Q 041537 230 ITLIQSGDHILNSFD-ERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKD 308 (547)
Q Consensus 230 V~lv~~~~~il~~~~-~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~ 308 (547)
|+++++.+.+++.+. +.....+.+.|++.||+++++++|++++++++.+....+++..++++|.||||+|..+ +. .
T Consensus 551 Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p--~~-~ 627 (690)
T 3k30_A 551 VSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLP--RE-E 627 (690)
T ss_dssp EEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEE--CC-H
T ss_pred eEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCC--Ch-H
Confidence 999999999887643 5667888899999999999999999999998887754344444699999999999644 44 3
Q ss_pred HHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 309 FMEQIGQGKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 309 l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+...++. .+. ++ +.|+|||+|||+.
T Consensus 628 l~~~l~~--~~~-------~t-~~~~VyaiGD~~~ 652 (690)
T 3k30_A 628 LYLDLVA--RRD-------AG-EIASVRGIGDAWA 652 (690)
T ss_dssp HHHHHHH--HHH-------HT-SCSEEEECGGGTS
T ss_pred HHHHHhh--hhc-------cc-CCCCEEEEeCCCc
Confidence 4433321 111 45 8999999999975
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=4.2e-31 Score=279.46 Aligned_cols=286 Identities=16% Similarity=0.119 Sum_probs=189.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCC-C------CCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV-S------SYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQF 99 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~-~------g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 99 (547)
.+++|+|||||+||+++|..|++ . +++|+|||++++++.. +.+.+.++.....++...+..++.+.+ ++|
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~-~~~gv~p~~~~~~~~~~~~~~~~~~~~--v~~ 78 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL-VRSGVAPDHPKIKSISKQFEKTAEDPR--FRF 78 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH-HHHTSCTTCTGGGGGHHHHHHHHTSTT--EEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc-cccccCCCCCCHHHHHHHHHHHHhcCC--CEE
Confidence 45799999999999999999988 6 9999999999875433 234444444445567777777777776 776
Q ss_pred EEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCC-ccCCCCCCccccccccCCHHHHHHHHHHHHHHHHH-c
Q 041537 100 WEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ-VNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEK-A 177 (547)
Q Consensus 100 ~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~-~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~-~ 177 (547)
+.+ +. + ++.|.+++ + .+.||+||||||+. ++.+++||.+. ..+.+..+.. ..+....+. .
T Consensus 79 ~~~-v~-v---~~~v~~~~----~----~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~---~~~~~~~d~~~ 140 (456)
T 1lqt_A 79 FGN-VV-V---GEHVQPGE----L----SERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFV---GWYNAHPHFEQ 140 (456)
T ss_dssp EES-CC-B---TTTBCHHH----H----HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHH---HHHTTCGGGTT
T ss_pred Eee-EE-E---CCEEEECC----C----eEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHH---hhhhcCccccc
Confidence 544 21 3 23344433 1 58999999999997 68889999741 1122222222 111110010 0
Q ss_pred cCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCC-----CCC-CC-ceEEEEecCCccCCcccH-----
Q 041537 178 VLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYP-----TVK-DL-VRITLIQSGDHILNSFDE----- 245 (547)
Q Consensus 178 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~-----~~~-~~-~~V~lv~~~~~il~~~~~----- 245 (547)
... ....++|+|||+|++|+|+|..|.....+.....++ .++ .+ .+|+++++.+.+++.|.+
T Consensus 141 ~~~------~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elre 214 (456)
T 1lqt_A 141 VSP------DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRE 214 (456)
T ss_dssp CCC------CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHH
T ss_pred chh------hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHH
Confidence 111 014579999999999999999998642211100000 001 13 499999999876544321
Q ss_pred --------------HH------------------HHHHHHHHHh------CCcEEEcCceEEEEeCCe----EEEEec--
Q 041537 246 --------------RI------------------SSFAEKKFQR------DGIEVLTECRVVNVSDKE----ITMKIK-- 281 (547)
Q Consensus 246 --------------~~------------------~~~~~~~l~~------~GV~v~~~~~V~~v~~~~----v~~~~~-- 281 (547)
++ .+.+.+.+++ +||++++++.+.++.+++ +++...
T Consensus 215 l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~ 294 (456)
T 1lqt_A 215 LADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNEL 294 (456)
T ss_dssp GGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEE
T ss_pred hhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEe
Confidence 11 2344455555 799999999999997642 555421
Q ss_pred -----------cCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 282 -----------STGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 282 -----------~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
.+|+..+++||+||||+|+++.+. ..++++.+|+|.||+++|+++.|+|||+|||+..
T Consensus 295 ~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l-----~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~g 363 (456)
T 1lqt_A 295 VSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT-----PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRG 363 (456)
T ss_dssp EECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC-----TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHC
T ss_pred cCCCcccccccCCCceEEEEcCEEEEccccccCCC-----CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCC
Confidence 135445699999999999877762 2345577888999999996699999999999864
No 80
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.1e-29 Score=270.14 Aligned_cols=282 Identities=12% Similarity=0.140 Sum_probs=178.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-----CeEEEEcCCCCCccCCChh--hhhc-------------------------
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-----YDVQVVSPQNYFAFTPLLP--SVTC------------------------- 74 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-----~~Vtlid~~~~~~~~p~l~--~~~~------------------------- 74 (547)
.+++|||||||++||++|..|++.| ++|+|||+++.++|.+... ....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3469999999999999999999888 9999999999877654211 0000
Q ss_pred --c---------c--cCccccchhHHHHHHhCCCcEEEEEEEEEEEECC---CC----EEEEecCCCCCCceeeeecCEE
Q 041537 75 --G---------T--VEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAA---KN----EVFCKSNIDKETRDFSLEYDYL 134 (547)
Q Consensus 75 --g---------~--~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~---~~----~v~~~~~~~~g~~~~~i~yD~L 134 (547)
+ . ....++...++.+.+..+..++ ...+|+.|++. ++ .|.+.+.. | ..+++.||+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~V~~i~~~~~~~~~~~~~V~~~~g~--g-~~~~~~~d~l 184 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSR-YGEEVLRIEPMLSAGQVEALRVISRNAD--G-EELVRTTRAL 184 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEE-ESEEEEEEEEEEETTEEEEEEEEEEETT--S-CEEEEEESEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEEecCCCceEEEEEEEecCC--C-ceEEEEeCEE
Confidence 0 0 0011222334444555565665 46789999876 44 45444421 2 2347999999
Q ss_pred EEccCCCccCCC-CCCccc--cccccCCHHH-HHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHH
Q 041537 135 IIAVGAQVNTFG-TPGVLE--NCHFLKELED-AQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELH 210 (547)
Q Consensus 135 ViAtG~~~~~~~-ipG~~e--~~~~~~~~~~-a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~ 210 (547)
|+|||+.|..|+ +++... ..+......+ ...+. ......++|+|||+|.+|+|+|..|.
T Consensus 185 VlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~vvVvGgG~sg~e~a~~l~ 247 (463)
T 3s5w_A 185 VVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQP-----------------CSSGKPMKIAIIGGGQSAAEAFIDLN 247 (463)
T ss_dssp EECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHHHHH
T ss_pred EECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhh-----------------hcccCCCeEEEECCCHhHHHHHHHHH
Confidence 999999877664 233221 1121111111 00000 00124579999999999999999999
Q ss_pred HHHHHhhhhhCCCCCCCceEEEEecCCccCCc--------------------ccHHHHHHHHHHHHh-------------
Q 041537 211 DYIQEDLINLYPTVKDLVRITLIQSGDHILNS--------------------FDERISSFAEKKFQR------------- 257 (547)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--------------------~~~~~~~~~~~~l~~------------- 257 (547)
+.. ++.+|+++++.+.++|. +++.....+.+.+..
T Consensus 248 ~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (463)
T 3s5w_A 248 DSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIER 315 (463)
T ss_dssp HHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHH
T ss_pred hcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHH
Confidence 862 25799999999988662 222333333333222
Q ss_pred -------------CCcEEEcCceEEEEeC--Ce--EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCcc
Q 041537 258 -------------DGIEVLTECRVVNVSD--KE--ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRV 320 (547)
Q Consensus 258 -------------~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~ 320 (547)
.||++++++.|++++. +. +.+.+..+|+..++++|.||||+|+.+.+.. .++..+.... |+
T Consensus 316 ~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~-~~l~~l~~~~-g~ 393 (463)
T 3s5w_A 316 IYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHR-QLLEPLAEYL-GD 393 (463)
T ss_dssp HHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-C-TTTGGGGGGB-C-
T ss_pred HHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCcc-chhHHHHHHh-CC
Confidence 6999999999999964 33 4555444577667999999999998766323 2222222111 78
Q ss_pred EEeCCCCCcCC----CCCEEEeCccCc
Q 041537 321 LATNEWLRVKE----CENVYALGDCAT 343 (547)
Q Consensus 321 i~Vd~~l~~~~----~~~VfaiGD~a~ 343 (547)
+.||+++++.. .|+|||+|||+.
T Consensus 394 i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 394 HEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp -CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred cccCcccccccCCCCCCeEEEcCCCcc
Confidence 99999999854 356999999975
No 81
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=3.5e-30 Score=287.60 Aligned_cols=260 Identities=16% Similarity=0.145 Sum_probs=175.5
Q ss_pred CCCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhC----CCcEE
Q 041537 23 EKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKR----NAEIQ 98 (547)
Q Consensus 23 ~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~----~~~v~ 98 (547)
++..++++|+|||||+|||++|..|++.|++|+|||+++++++.........+..+.......+...++.. ...++
T Consensus 384 ~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~ 463 (729)
T 1o94_A 384 RQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQL 463 (729)
T ss_dssp CCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred ccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceE
Confidence 34456789999999999999999999999999999999887654322222222211112222222222221 00132
Q ss_pred EEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCC--------ccCCCCCCccccccccCCHHHHHHHHHHH
Q 041537 99 FWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ--------VNTFGTPGVLENCHFLKELEDAQKIRRTV 170 (547)
Q Consensus 99 ~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~--------~~~~~ipG~~e~~~~~~~~~~a~~l~~~l 170 (547)
++. ++.+.+++ +. .+.||+||||||+. |..+++||.+++...+.+..++..
T Consensus 464 --------i~~-~~~v~~~~----~~---~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~----- 522 (729)
T 1o94_A 464 --------ALG-QKPMTADD----VL---QYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD----- 522 (729)
T ss_dssp --------ECS-CCCCCHHH----HH---TSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH-----
T ss_pred --------EEe-CeEEehhh----cc---ccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc-----
Confidence 222 23344333 22 68999999999998 456788987632222334333211
Q ss_pred HHHHHHccCCCCCHHHHhccccEEEEc--CChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc--ccHH
Q 041537 171 TDCFEKAVLPGLSEEERKRNLHFVIVG--GGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS--FDER 246 (547)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--~~~~ 246 (547)
. . ...+++|+||| ||++|+|+|..|.++ +.+|+++++.+ +++. ++..
T Consensus 523 -----~-~--------~~~gk~VvVIG~GgG~~g~e~A~~l~~~--------------G~~Vtlv~~~~-l~~~~~~~~~ 573 (729)
T 1o94_A 523 -----G-K--------KKIGKRVVILNADTYFMAPSLAEKLATA--------------GHEVTIVSGVH-LANYMHFTLE 573 (729)
T ss_dssp -----C-C--------SCCCSEEEEEECCCSSHHHHHHHHHHHT--------------TCEEEEEESSC-TTHHHHHTTC
T ss_pred -----C-C--------CCCCCeEEEEcCCCCchHHHHHHHHHHc--------------CCEEEEEeccc-cccccccccc
Confidence 0 0 12457999999 999999999999876 67999999998 6652 3333
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEecc-CC-----------------eEEEEeeceEEEccCCCCCcchHH
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKS-TG-----------------AVCSIPHGLVLWSTGVGTRPAIKD 308 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~-~G-----------------~~~~i~~D~vv~a~G~~~~p~~~~ 308 (547)
...+.+.|+++||++++++.|++++++++.+.... ++ ++.++++|.||||+|.. |+. .
T Consensus 574 -~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~--p~~-~ 649 (729)
T 1o94_A 574 -YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH--SEC-T 649 (729)
T ss_dssp -HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE--ECC-H
T ss_pred -HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC--CCh-H
Confidence 46778889999999999999999998887765321 12 12249999999999964 444 3
Q ss_pred HHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 309 FMEQIGQGKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 309 l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+...++. .||+++|| +.|+|||+|||+.
T Consensus 650 l~~~l~~------~vd~~~~t-~~~~VyAiGD~~~ 677 (729)
T 1o94_A 650 LWNELKA------RESEWAEN-DIKGIYLIGDAEA 677 (729)
T ss_dssp HHHHHHH------TGGGTGGG-TCCEEEECGGGTS
T ss_pred HHHHHhh------hccccccc-CCCCeEEEeCccc
Confidence 4444421 36889998 8999999999974
No 82
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=5.3e-30 Score=271.27 Aligned_cols=285 Identities=16% Similarity=0.161 Sum_probs=180.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC--CeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS--YDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEA 104 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g--~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 104 (547)
.+++|+|||||+||+++|..|++.| ++|+|||+++..+.. +.+.+.+......++...+..++++.+ ++++.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~g--v~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDR--CAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTT--EEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCC--cEEEeeeE
Confidence 3579999999999999999999777 999999999876432 222222332233455666777777776 66554321
Q ss_pred EEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCc-cCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCC
Q 041537 105 IKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQV-NTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGL 182 (547)
Q Consensus 105 ~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~-~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 182 (547)
+ .+.|.+.+ ..+.||+||+|||+.+ +.|++||.+ ++++ +..+. ...+...-+....
T Consensus 82 --v---~~~V~~~~--------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~---~~~~~---~~~~~~~~d~~~~--- 139 (460)
T 1cjc_A 82 --V---GRDVTVQE--------LQDAYHAVVLSYGAEDHQALDIPGEELPGVF---SARAF---VGWYNGLPENREL--- 139 (460)
T ss_dssp --B---TTTBCHHH--------HHHHSSEEEECCCCCEECCCCCTTTTSTTEE---EHHHH---HHHHTTCGGGTTC---
T ss_pred --E---eeEEEecc--------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEE---EHHHH---HHHhhcCcccccc---
Confidence 1 12343332 1578999999999995 778999974 2222 22221 1111000000000
Q ss_pred CHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhh-hCC-----CC-CCCc-eEEEEecCCcc--------------C
Q 041537 183 SEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLIN-LYP-----TV-KDLV-RITLIQSGDHI--------------L 240 (547)
Q Consensus 183 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~-~~~-----~~-~~~~-~V~lv~~~~~i--------------l 240 (547)
.. ....++++|||+|++|+|+|..|.+...+ +.+ ..+ .+ ..+. +|+++++.+.+ +
T Consensus 140 ~~--~~~~~~vvVIGgG~~g~e~A~~L~~~~~~-l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~l 216 (460)
T 1cjc_A 140 AP--DLSCDTAVILGQGNVALDVARILLTPPDH-LEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQL 216 (460)
T ss_dssp CC--CTTSSEEEEESCSHHHHHHHHHHHSCGGG-GTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTC
T ss_pred cc--CCCCCEEEEECCCHHHHHHHHHHhhchhh-hccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcC
Confidence 00 01357999999999999999999842110 000 000 00 1245 79999998865 3
Q ss_pred Ccc-------------------cH---HHHHHHHHHHHh--------------CCcEEEcCceEEEEeCC----e---EE
Q 041537 241 NSF-------------------DE---RISSFAEKKFQR--------------DGIEVLTECRVVNVSDK----E---IT 277 (547)
Q Consensus 241 ~~~-------------------~~---~~~~~~~~~l~~--------------~GV~v~~~~~V~~v~~~----~---v~ 277 (547)
|.. +. .+.+.+.+.+++ +||++++++.+.++.++ . +.
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~ 296 (460)
T 1cjc_A 217 PGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIR 296 (460)
T ss_dssp TTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEE
T ss_pred CCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEE
Confidence 321 11 133344445555 89999999999999643 2 44
Q ss_pred EEec------------cCCeEEEEeeceEEEccCCCCCcchHHHHHHh-CCCCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 278 MKIK------------STGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI-GQGKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 278 ~~~~------------~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
+... .+|+..+++||+||||+|+++++. ..+ .++.+|+|.||+++|+.+.|+|||+|||+..
T Consensus 297 ~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g 371 (460)
T 1cjc_A 297 LAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRG 371 (460)
T ss_dssp EEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHC
T ss_pred EEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcC
Confidence 4321 025445699999999999877763 234 5567788999999999448999999999863
No 83
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.3e-29 Score=281.07 Aligned_cols=274 Identities=14% Similarity=0.150 Sum_probs=188.3
Q ss_pred cccCCCCCCCCCCCCCCCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHH
Q 041537 8 SESQSEPGSPASEHGEKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVR 87 (547)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~ 87 (547)
|..+|...........+...+++|||||||+||+++|..|++.|++|+|||++++++++..+.....+..+..++...+.
T Consensus 353 C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 432 (671)
T 1ps9_A 353 CLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYR 432 (671)
T ss_dssp CSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHH
T ss_pred EEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHH
Confidence 55666543332222234456789999999999999999999999999999999988776544444444333333444566
Q ss_pred HHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeee-ecCEEEEccCCCccCCCCCCccc-cccccCCHHHHHH
Q 041537 88 NIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSL-EYDYLIIAVGAQVNTFGTPGVLE-NCHFLKELEDAQK 165 (547)
Q Consensus 88 ~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i-~yD~LViAtG~~~~~~~ipG~~e-~~~~~~~~~~a~~ 165 (547)
..+++.+ ++++.++. +. .. .+ .||+||||||+.|+.|++||.++ +++ +..+.
T Consensus 433 ~~~~~~g--v~~~~~~~---------v~-------~~---~~~~~d~lviAtG~~p~~~~i~G~~~~~v~---~~~~~-- 486 (671)
T 1ps9_A 433 RMIEVTG--VTLKLNHT---------VT-------AD---QLQAFDETILASGIVPRTPPIDGIDHPKVL---SYLDV-- 486 (671)
T ss_dssp HHHHHHT--CEEEESCC---------CC-------SS---SSCCSSEEEECCCEEECCCCCBTTTSTTEE---EHHHH--
T ss_pred HHHHHcC--CEEEeCcE---------ec-------HH---HhhcCCEEEEccCCCcCCCCCCCCCCCcEe---eHHHH--
Confidence 6677777 55443321 11 11 45 89999999999999999999754 222 22111
Q ss_pred HHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHh------hhh----------------hCCC
Q 041537 166 IRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQED------LIN----------------LYPT 223 (547)
Q Consensus 166 l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~------~~~----------------~~~~ 223 (547)
+.. . ...+++|+|||||++|+|+|..|.+...+. +.+ .+|.
T Consensus 487 --------l~~---~------~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~ 549 (671)
T 1ps9_A 487 --------LRD---K------APVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQ 549 (671)
T ss_dssp --------HTS---C------CCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCC
T ss_pred --------hhC---C------CCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccc
Confidence 110 0 124579999999999999999998653211 010 1222
Q ss_pred CC-CCceEEEEecCCccCC-cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 224 VK-DLVRITLIQSGDHILN-SFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 224 ~~-~~~~V~lv~~~~~il~-~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.. ...+|+++++.+..++ .+++.....+.+.|++.||+++++++|++++++++++. .+|+..++++|.||||+|+.
T Consensus 550 ~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~--~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 550 IPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV--INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp CCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE--ETTEEEEECCSEEEECCCEE
T ss_pred cCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe--cCCeEEEEeCCEEEECCCcc
Confidence 22 3468999999887664 56777788888999999999999999999999888774 24755569999999999965
Q ss_pred CCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 302 TRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 302 ~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
+ +. .+...+ +. ..++||++|||+..
T Consensus 628 p--~~-~l~~~l--------------~~-~g~~v~aiGD~~~~ 652 (671)
T 1ps9_A 628 P--NR-ALAQPL--------------ID-SGKTVHLIGGCDVA 652 (671)
T ss_dssp E--CC-TTHHHH--------------HT-TTCCEEECGGGTCC
T ss_pred c--cH-HHHHHH--------------Hh-cCCCEEEECCcCcc
Confidence 4 43 333332 11 23689999999863
No 84
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=8.3e-29 Score=262.88 Aligned_cols=253 Identities=11% Similarity=0.140 Sum_probs=174.0
Q ss_pred CeEEEECCchHHHHHHHhcCC---CCCe---EEEEcCCCCCccCCCh-----------------hhhh------------
Q 041537 29 KRVVLLGTGWAGISFLKDLDV---SSYD---VQVVSPQNYFAFTPLL-----------------PSVT------------ 73 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~---~g~~---Vtlid~~~~~~~~p~l-----------------~~~~------------ 73 (547)
++|+|||||++||++|..|++ .|++ |+|||+++..++.... +...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999998 9999 9999998765432110 0000
Q ss_pred ------------ccccCccccchhHHHHHHhCCCc--EEEEEEEEEEEECCCC----EEEEecCCCCCCceeeeecCEEE
Q 041537 74 ------------CGTVEARSIAEPVRNIIKKRNAE--IQFWEAEAIKIDAAKN----EVFCKSNIDKETRDFSLEYDYLI 135 (547)
Q Consensus 74 ------------~g~~~~~~~~~~~~~~~~~~~~~--v~~~~~~v~~id~~~~----~v~~~~~~~~g~~~~~i~yD~LV 135 (547)
........+...++.++++.++. ++ .+.+|+.|++..+ .|++.+.. .| ...++.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~-~~~~V~~v~~~~~~~~~~V~~~~~~-~g-~~~~~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIR-FNTAVRHVEFNEDSQTFTVTVQDHT-TD-TIYSEEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEE-CSEEEEEEEEETTTTEEEEEEEETT-TT-EEEEEEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEE-eCCEEEEEEEcCCCCcEEEEEEEcC-CC-ceEEEEcCEEE
Confidence 00111123444566666766754 44 4788999987665 66665421 02 12478999999
Q ss_pred EccC--CCccCCCCCCcccc---ccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHH
Q 041537 136 IAVG--AQVNTFGTPGVLEN---CHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELH 210 (547)
Q Consensus 136 iAtG--~~~~~~~ipG~~e~---~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~ 210 (547)
+||| +.|+.|.+||.++. ....+... ......+++|+|||+|++|+|+|.+|.
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~----------------------~~~~~~~k~VvVVG~G~sg~eiA~~l~ 217 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFR----------------------DALEFKDKTVLLVGSSYSAEDIGSQCY 217 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCC----------------------CGGGGTTSEEEEECCSTTHHHHHHHHH
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhC----------------------CHhHcCCCEEEEEcCCCCHHHHHHHHH
Confidence 9999 88999999997642 11111000 011134679999999999999999999
Q ss_pred HHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEe
Q 041537 211 DYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIP 290 (547)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~ 290 (547)
.. +.+|+++++.+.+++..- ..||+++ ..|+++++++|++.+ |+. ++
T Consensus 218 ~~--------------g~~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~~~V~~~d---G~~--i~ 264 (464)
T 2xve_A 218 KY--------------GAKKLISCYRTAPMGYKW------------PENWDER--PNLVRVDTENAYFAD---GSS--EK 264 (464)
T ss_dssp HT--------------TCSEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECSSEEEETT---SCE--EE
T ss_pred Hh--------------CCeEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeCCEEEECC---CCE--Ee
Confidence 86 579999999988876421 2488887 789999988887754 875 89
Q ss_pred eceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCC---CCcCCCCCEEEeCccCc
Q 041537 291 HGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEW---LRVKECENVYALGDCAT 343 (547)
Q Consensus 291 ~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~---l~~~~~~~VfaiGD~a~ 343 (547)
+|.||+|+|+.++ ...|...+++ ++++++ ++.+ +++ +.|+|||+|||+.
T Consensus 265 ~D~Vi~atG~~p~--~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~ 318 (464)
T 2xve_A 265 VDAIILCTGYIHH--FPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ 318 (464)
T ss_dssp CSEEEECCCBCCC--CTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC
T ss_pred CCEEEECCCCCCC--CCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc
Confidence 9999999997544 3222223455 333354 4433 445 8999999999864
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=3.1e-29 Score=289.25 Aligned_cols=275 Identities=15% Similarity=0.143 Sum_probs=179.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
+.++|+|||||+|||++|.+|++.|+ +|+|||+++++++. +.+.++... .+.++.....+++++.+ ++++.+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~-~~~~ip~~~-~~~~~~~~~~~~~~~~g--v~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFR-LPYDVVNFEIELMKDLG--VKIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH-HHHTSCTTT-SCHHHHHHHHHHHHTTT--CEEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc-ccccCCccc-CCHHHHHHHHHHHHHCC--cEEEcccEe
Confidence 46799999999999999999999999 79999998876653 122222111 12334444556777777 666554433
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCC-CccCCCC-CCccccccccCCHHHHHHHHHHHHHHHHHccCCCCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGA-QVNTFGT-PGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLS 183 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~-~~~~~~i-pG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 183 (547)
. .+.+++++ +. ++.||+||||||+ .|+.+++ +|+.+. ..+.+..+.++ .+.+... .......
T Consensus 262 ~----~~~v~~~~----~~---~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~---~~~~~~~-~~~~~~~ 325 (1025)
T 1gte_A 262 S----ENEITLNT----LK---EEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLP---LVAKSSK-AGMCACH 325 (1025)
T ss_dssp S----TTSBCHHH----HH---HTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHH---HHHHHHC-BTTBSCC
T ss_pred c----cceEEhhh----cC---ccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHH---HHHhhcc-ccccccc
Confidence 1 12344433 21 5889999999999 4776654 465321 11222223222 2111100 0000000
Q ss_pred HHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc-eEEEEecCC-ccCCcccHHHHHHHHHHHHhCCcE
Q 041537 184 EEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV-RITLIQSGD-HILNSFDERISSFAEKKFQRDGIE 261 (547)
Q Consensus 184 ~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~-~il~~~~~~~~~~~~~~l~~~GV~ 261 (547)
.......++|+|||||++|+|+|..+.++ +. +|+++++.+ .+++.+++++ +.+++.||+
T Consensus 326 ~~~~~~~~~VvVIGgG~~g~e~A~~~~~~--------------G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~ 386 (1025)
T 1gte_A 326 SPLPSIRGAVIVLGAGDTAFDCATSALRC--------------GARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCE 386 (1025)
T ss_dssp CCCCCCCSEEEEECSSHHHHHHHHHHHHT--------------TCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCE
T ss_pred ccccccCCcEEEECCChHHHHHHHHHHHc--------------CCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCE
Confidence 00001235999999999999999999876 44 899999998 5677776654 467789999
Q ss_pred EEcCceEEEEeC--CeE---EEEec---cC-------CeEEEEeeceEEEccCCCCCcchHHHHHHh-CC--CCCccEEe
Q 041537 262 VLTECRVVNVSD--KEI---TMKIK---ST-------GAVCSIPHGLVLWSTGVGTRPAIKDFMEQI-GQ--GKRRVLAT 323 (547)
Q Consensus 262 v~~~~~V~~v~~--~~v---~~~~~---~~-------G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~-~~--~~~g~i~V 323 (547)
+++++.++++.. +.+ ++... .+ |+..++++|+||||+|..+ |+. .|..++ ++ +.+|+|.|
T Consensus 387 ~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~-~~~-~l~~~~~gl~~~~~G~I~v 464 (1025)
T 1gte_A 387 FLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL-RDP-KVKEALSPIKFNRWDLPEV 464 (1025)
T ss_dssp EECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC-CCH-HHHHHTTTSCBCTTSSBCC
T ss_pred EEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC-Cch-hhhhcccCceECCCCCEEE
Confidence 999999998863 433 33210 11 3334699999999999633 233 455442 54 67899999
Q ss_pred CC-CCCcCCCCCEEEeCccCc
Q 041537 324 NE-WLRVKECENVYALGDCAT 343 (547)
Q Consensus 324 d~-~l~~~~~~~VfaiGD~a~ 343 (547)
|+ ++|| +.|+|||+|||+.
T Consensus 465 d~~~~~T-s~~~VfA~GD~~~ 484 (1025)
T 1gte_A 465 DPETMQT-SEPWVFAGGDIVG 484 (1025)
T ss_dssp CTTTCBC-SSTTEEECSGGGC
T ss_pred CCCCCcc-CCCCEEEeCCCCC
Confidence 97 8998 8999999999986
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=4.1e-28 Score=278.13 Aligned_cols=266 Identities=14% Similarity=0.149 Sum_probs=180.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChh--hhhccccCccccchhHHHHHHhC-CCcEEEE-EE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLP--SVTCGTVEARSIAEPVRNIIKKR-NAEIQFW-EA 102 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~--~~~~g~~~~~~~~~~~~~~~~~~-~~~v~~~-~~ 102 (547)
..++|||||||+||++||..|++.|++|+|||++++++++.... ....+. ...+....+.+.+... + ++++ ..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~--v~~~~~~ 203 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEE--TTHLQRT 203 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTT--EEEESSE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCC--cEEEeCC
Confidence 35789999999999999999999999999999998876544410 011111 1122223333344444 5 5554 45
Q ss_pred EEEEEECCCCEEEEecCCC----C------CCceeeeecCEEEEccCCCccCCCCCCccc-cccccCCHHHHHHHHHHHH
Q 041537 103 EAIKIDAAKNEVFCKSNID----K------ETRDFSLEYDYLIIAVGAQVNTFGTPGVLE-NCHFLKELEDAQKIRRTVT 171 (547)
Q Consensus 103 ~v~~id~~~~~v~~~~~~~----~------g~~~~~i~yD~LViAtG~~~~~~~ipG~~e-~~~~~~~~~~a~~l~~~l~ 171 (547)
+|..++.++....+..... . ......+.||+||||||+.++.+++||.+. .++. ..+ ++..+
T Consensus 204 ~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~---~~~---~~~~l- 276 (965)
T 2gag_A 204 TVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIML---AGA---VRSYL- 276 (965)
T ss_dssp EEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEE---HHH---HHHHH-
T ss_pred EEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEE---hHH---HHHHH-
Confidence 7888887654333221000 0 011237999999999999999999999753 2222 122 11111
Q ss_pred HHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHH
Q 041537 172 DCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFA 251 (547)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 251 (547)
.... ...+++++|||+|++|+|+|..|.++ +.+|+++++.+.+++.
T Consensus 277 ---~~~~--------~~~gk~vvViGgG~~g~E~A~~L~~~--------------G~~Vtvv~~~~~~~~~--------- 322 (965)
T 2gag_A 277 ---NRYG--------VRAGARIAVATTNDSAYELVRELAAT--------------GGVVAVIDARSSISAA--------- 322 (965)
T ss_dssp ---HTTC--------EESCSSEEEEESSTTHHHHHHHHGGG--------------TCCSEEEESCSSCCHH---------
T ss_pred ---HhcC--------CCCCCeEEEEcCCHHHHHHHHHHHHc--------------CCcEEEEECCCccchh---------
Confidence 1100 12346999999999999999999876 5789999999887532
Q ss_pred HHHHHhCCcEEEcCceEEEEeC--C----eEEEEec-c---CCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccE
Q 041537 252 EKKFQRDGIEVLTECRVVNVSD--K----EITMKIK-S---TGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVL 321 (547)
Q Consensus 252 ~~~l~~~GV~v~~~~~V~~v~~--~----~v~~~~~-~---~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i 321 (547)
.+.|++.||++++++.|++++. + .+++.+. . +|+..+++||.||+|+|. .|++ .++... .++|
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~--~P~~-~l~~~~----~g~i 395 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF--NPVV-HLHSQR----QGKL 395 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE--EECC-HHHHHT----TCCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc--CcCh-HHHHhC----CCcE
Confidence 5678899999999999999975 3 3555531 0 253346999999999995 5555 344333 4679
Q ss_pred EeCCCCCc----CCCCCEEEeCccCc
Q 041537 322 ATNEWLRV----KECENVYALGDCAT 343 (547)
Q Consensus 322 ~Vd~~l~~----~~~~~VfaiGD~a~ 343 (547)
.||++++. ++.|+|||+|||+.
T Consensus 396 ~vd~~~~~~v~~ts~p~IyAaGD~a~ 421 (965)
T 2gag_A 396 DWDTTIHAFVPADAVANQHLAGAMTG 421 (965)
T ss_dssp EEETTTTEEEECSCCTTEEECGGGGT
T ss_pred EEcCcccccccCCCCCCEEEEEecCC
Confidence 99998872 48999999999986
No 87
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=6.5e-28 Score=260.03 Aligned_cols=267 Identities=15% Similarity=0.181 Sum_probs=179.9
Q ss_pred CCCeEEEECCchHHHHHHHhcC-CCCCeEEEEcCCCCCccCCChh---hh----h-------------------ccccCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLD-VSSYDVQVVSPQNYFAFTPLLP---SV----T-------------------CGTVEA 79 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~-~~g~~Vtlid~~~~~~~~p~l~---~~----~-------------------~g~~~~ 79 (547)
.+.+|||||||++|+++|..|+ +.|++|+|||+++..+.+.... .. . ......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3579999999999999999999 9999999999987654321100 00 0 000112
Q ss_pred cccchhHHHHHHhCCC--cEEEEEEEEEEEECCCC----EEEEecCCCCCCceeeeecCEEEEccC--CCccCCCCCCcc
Q 041537 80 RSIAEPVRNIIKKRNA--EIQFWEAEAIKIDAAKN----EVFCKSNIDKETRDFSLEYDYLIIAVG--AQVNTFGTPGVL 151 (547)
Q Consensus 80 ~~~~~~~~~~~~~~~~--~v~~~~~~v~~id~~~~----~v~~~~~~~~g~~~~~i~yD~LViAtG--~~~~~~~ipG~~ 151 (547)
.++...+...+++.++ .++ ...+|+.++.+.+ .|.+.+ |+ ++.||+||+|+| +.|..|++||++
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~~~V~~~~----G~---~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFK-FGTEVTSALYLDDENLWEVTTDH----GE---VYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-ESCCEEEEEEETTTTEEEEEETT----SC---EEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHHcCCcceeE-eccEEEEEEEeCCCCEEEEEEcC----CC---EEEeCEEEECCcccccCCCCCCCCcc
Confidence 2345556677777775 554 4678888887665 555544 44 799999999999 688999999986
Q ss_pred cccc-ccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 152 ENCH-FLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 152 e~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
+..- .+++.. . +......+++|+|||+|.+|+|+|.+|++. +.+|
T Consensus 159 ~f~g~~~~~~~-----------------~---~~~~~~~~krV~VIG~G~sgve~a~~l~~~--------------~~~V 204 (540)
T 3gwf_A 159 TFEGETIHTAA-----------------W---PEGKSLAGRRVGVIGTGSTGQQVITSLAPE--------------VEHL 204 (540)
T ss_dssp GCCSEEEEGGG-----------------C---CSSCCCTTSEEEEECCSHHHHHHHHHHTTT--------------CSEE
T ss_pred ccCCCEEEeec-----------------C---CCccccccceEEEECCCchHHHHHHHHHhh--------------CCEE
Confidence 4210 011100 0 000113457999999999999999999875 6799
Q ss_pred EEEecCCc-cCCcccHHHHHHHHHHH------------------------------------------------------
Q 041537 231 TLIQSGDH-ILNSFDERISSFAEKKF------------------------------------------------------ 255 (547)
Q Consensus 231 ~lv~~~~~-il~~~~~~~~~~~~~~l------------------------------------------------------ 255 (547)
+++++.+. ++|.+++.+.+...+.|
T Consensus 205 tv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~ 284 (540)
T 3gwf_A 205 TVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFG 284 (540)
T ss_dssp EEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHT
T ss_pred EEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhh
Confidence 99999998 45543322211111111
Q ss_pred --------------------------------------------------------HhCCcEEEc--CceEEEEeCCeEE
Q 041537 256 --------------------------------------------------------QRDGIEVLT--ECRVVNVSDKEIT 277 (547)
Q Consensus 256 --------------------------------------------------------~~~GV~v~~--~~~V~~v~~~~v~ 277 (547)
.+.+|+++. +..|+++++++|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~ 364 (540)
T 3gwf_A 285 TFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVV 364 (540)
T ss_dssp SCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEE
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEE
Confidence 144888886 7899999999988
Q ss_pred EEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeC----------CCCCcCCCCCEEEe-CccCc
Q 041537 278 MKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATN----------EWLRVKECENVYAL-GDCAT 343 (547)
Q Consensus 278 ~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd----------~~l~~~~~~~Vfai-GD~a~ 343 (547)
+.+ |+. +++|+||+|||+.+.. .++..+++..++++.++ ..+.+.+.||+|++ |..+.
T Consensus 365 ~~d---G~~--~~~DvIV~ATGf~~~~---~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~ 433 (540)
T 3gwf_A 365 TED---GVL--HELDVLVFATGFDAVD---GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP 433 (540)
T ss_dssp ETT---CCE--EECSEEEECCCBSCSS---HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB
T ss_pred cCC---CCE--EECCEEEECCccCccc---cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC
Confidence 765 876 9999999999985543 23334444333334443 23677899999999 87654
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.94 E-value=1e-26 Score=246.02 Aligned_cols=258 Identities=16% Similarity=0.090 Sum_probs=164.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCCCCccCCChhh-------hh---------------------cc-
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQNYFAFTPLLPS-------VT---------------------CG- 75 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~~~~~~p~l~~-------~~---------------------~g- 75 (547)
+.++|+|||||++||++|..|++.|. +|+|||+++..+....... ++ ..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 9999999865432111100 00 00
Q ss_pred --------------------------ccCccccchhHHHHHHhCCCcEEEEEEEEEEEECCCC--EEEEecCCCCCCcee
Q 041537 76 --------------------------TVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKN--EVFCKSNIDKETRDF 127 (547)
Q Consensus 76 --------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~--~v~~~~~~~~g~~~~ 127 (547)
......+...+..+++..+..++ .+.+|+.|+.... .|++.+.. +|....
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~-~~t~V~~v~~~~~~~~V~~~~~~-~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIK-LATDVLDIEKKDGSWVVTYKGTK-AGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEE-CSEEEEEEEEETTEEEEEEEESS-TTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEE-eCCEEEEEEeCCCeEEEEEeecC-CCCeeE
Confidence 00001222334455555444465 4789999987666 45544311 021023
Q ss_pred eeecCEEEEccCC--CccCCCCCCcccc-------ccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcC
Q 041537 128 SLEYDYLIIAVGA--QVNTFGTPGVLEN-------CHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGG 198 (547)
Q Consensus 128 ~i~yD~LViAtG~--~~~~~~ipG~~e~-------~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGg 198 (547)
++.||+||+|+|. .|+.|.+||+++. ....+.. .......+++|+|||+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~----------------------~~~~~~~~k~VvVvG~ 220 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLF----------------------REPELFVGESVLVVGG 220 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGC----------------------CCGGGGTTCCEEEECS
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEeccc----------------------CChhhcCCCEEEEEcc
Confidence 6899999999998 7888889987532 1111110 0111135679999999
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhCCCCCCCce-EEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCe
Q 041537 199 GPTGVEFAAELHDYIQEDLINLYPTVKDLVR-ITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVS--DKE 275 (547)
Q Consensus 199 G~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~ 275 (547)
|++|+|+|.+|... +.+ |+++++.+.+ +++.||.+ +..|++++ ++.
T Consensus 221 G~sg~e~A~~l~~~--------------~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~~ 269 (447)
T 2gv8_A 221 ASSANDLVRHLTPV--------------AKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTRE 269 (447)
T ss_dssp SHHHHHHHHHHTTT--------------SCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTTE
T ss_pred CcCHHHHHHHHHHH--------------hCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCCE
Confidence 99999999999876 467 9999998765 34567774 56789995 345
Q ss_pred EEEEeccCCeEEEEeeceEEEccCCCCC-cchHH-HHHHh--CCCCCccEEeCCCCCc--CCCCCEEEeCccCc
Q 041537 276 ITMKIKSTGAVCSIPHGLVLWSTGVGTR-PAIKD-FMEQI--GQGKRRVLATNEWLRV--KECENVYALGDCAT 343 (547)
Q Consensus 276 v~~~~~~~G~~~~i~~D~vv~a~G~~~~-p~~~~-l~~~~--~~~~~g~i~Vd~~l~~--~~~~~VfaiGD~a~ 343 (547)
|++.+ |+. ++++|.||||+|+.++ |.+.. .++++ ++..++.+.++.+.++ .+.|+||++|||..
T Consensus 270 v~~~d---G~~-~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~ 339 (447)
T 2gv8_A 270 IYLKG---GKV-LSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALH 339 (447)
T ss_dssp EEETT---TEE-ECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBS
T ss_pred EEECC---CCE-eccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccc
Confidence 66643 763 4799999999997654 32000 01212 2323344445544442 47899999999964
No 89
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.94 E-value=3.7e-26 Score=244.37 Aligned_cols=238 Identities=16% Similarity=0.183 Sum_probs=159.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh-hcccc-CccccchhHHHHHHhCCCcEEE-EEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV-TCGTV-EARSIAEPVRNIIKKRNAEIQF-WEAEA 104 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~-~~g~~-~~~~~~~~~~~~~~~~~~~v~~-~~~~v 104 (547)
+++|||||||++|+++|.+|++. ++|+|||+++++++....... ..+.. ...++...+.+.+ ..+ +++ ...+|
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~--v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NEN--TKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTT--EEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcC--CEEEcCCEE
Confidence 46899999999999999999988 999999999887654321110 11100 1122222222222 334 553 45788
Q ss_pred EEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCH
Q 041537 105 IKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSE 184 (547)
Q Consensus 105 ~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 184 (547)
..++.+++.+.+.... ......+.||+||+|||+.+..+++||.+.. .+.+..++..+.+. ..
T Consensus 184 ~~i~~~~~~~~~~~~~--~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~~-------~~------ 246 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVR--GDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMNV-------WE------ 246 (493)
T ss_dssp CCCEECSSSEEEEEEE--TTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHHT-------SC------
T ss_pred EEEEcCCcEEEEEEec--CCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHHh-------cc------
Confidence 8888877654432110 1212479999999999999999999987521 12233333322211 00
Q ss_pred HHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEc
Q 041537 185 EERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLT 264 (547)
Q Consensus 185 ~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~ 264 (547)
....++++|||+|++|+| +.+++.||++++
T Consensus 247 --~~~~~~vvViGgG~~gle------------------------------------------------~~l~~~GV~v~~ 276 (493)
T 1y56_A 247 --VAPGRKVAVTGSKADEVI------------------------------------------------QELERWGIDYVH 276 (493)
T ss_dssp --BCSCSEEEEESTTHHHHH------------------------------------------------HHHHHHTCEEEE
T ss_pred --cCCCCEEEEECCCHHHHH------------------------------------------------HHHHhCCcEEEe
Confidence 123469999999999987 345678999999
Q ss_pred CceEEEEeCCe-EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC----CCCccEE-eCCCCCcCCCCCEEEe
Q 041537 265 ECRVVNVSDKE-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ----GKRRVLA-TNEWLRVKECENVYAL 338 (547)
Q Consensus 265 ~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~----~~~g~i~-Vd~~l~~~~~~~Vfai 338 (547)
++.|++++.++ +......+|+. +++|.||+|+|+. |+. .++..+++ +.+|+|. ||++++ +.|+|||+
T Consensus 277 ~~~v~~i~~~~~v~~v~~~~g~~--i~aD~Vv~a~G~~--p~~-~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~ 349 (493)
T 1y56_A 277 IPNVKRVEGNEKVERVIDMNNHE--YKVDALIFADGRR--PDI-NPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVA 349 (493)
T ss_dssp CSSEEEEECSSSCCEEEETTCCE--EECSEEEECCCEE--ECC-HHHHHTTCCEEEETTEEEECCCTTSE--EETTEEEC
T ss_pred CCeeEEEecCCceEEEEeCCCeE--EEeCEEEECCCcC--cCc-hHHHhcCCCccccCCceeeccccccC--cCCCEEEE
Confidence 99999997643 22112234654 9999999999964 444 46666665 3578887 899999 78999999
Q ss_pred CccCc
Q 041537 339 GDCAT 343 (547)
Q Consensus 339 GD~a~ 343 (547)
|||+.
T Consensus 350 GD~~~ 354 (493)
T 1y56_A 350 GSAVS 354 (493)
T ss_dssp STTTC
T ss_pred eccCC
Confidence 99986
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=1e-26 Score=250.89 Aligned_cols=182 Identities=13% Similarity=0.083 Sum_probs=118.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh--------------hh------------hhccccCc
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL--------------PS------------VTCGTVEA 79 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l--------------~~------------~~~g~~~~ 79 (547)
+..++|||||||++|+++|..|++.|++|+|||+++.++++... +. ........
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 34679999999999999999999999999999998765432110 00 00111122
Q ss_pred cccchhHHHHHHhCCC--cEEEEEEEEEEEECCCC----EEEEecCCCCCCceeeeecCEEEEccC--CCccCCCCCCcc
Q 041537 80 RSIAEPVRNIIKKRNA--EIQFWEAEAIKIDAAKN----EVFCKSNIDKETRDFSLEYDYLIIAVG--AQVNTFGTPGVL 151 (547)
Q Consensus 80 ~~~~~~~~~~~~~~~~--~v~~~~~~v~~id~~~~----~v~~~~~~~~g~~~~~i~yD~LViAtG--~~~~~~~ipG~~ 151 (547)
.++...++.++++.++ +++ +..+|+.++.+.. .|.+.+ |. ++.||+||+|+| +.|+.|++||++
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~----G~---~~~ad~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDN----EE---VVTCRFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETT----TE---EEEEEEEEECCCSCBC---CCCTTGG
T ss_pred HHHHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECC----CC---EEEeCEEEECcCCCCCCcCCCCCCcc
Confidence 3455566777777664 454 3668888876554 555554 43 899999999999 889999999986
Q ss_pred cccc-ccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 152 ENCH-FLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 152 e~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
+..- .+++... ....+..+......+++|+|||+|++|+|+|.+|++. +.+|
T Consensus 159 ~f~g~~~h~~~~-------------~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~--------------~~~V 211 (545)
T 3uox_A 159 SFKGESFHSSRW-------------PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAET--------------AKEL 211 (545)
T ss_dssp GCCSEEEEGGGC-------------CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTT--------------BSEE
T ss_pred ccCCCeEEcccc-------------cccccccccccccCCCeEEEECCCccHHHHHHHHHhh--------------CCEE
Confidence 4211 0111000 0000000000113567999999999999999999875 5799
Q ss_pred EEEecCCc-cCCc
Q 041537 231 TLIQSGDH-ILNS 242 (547)
Q Consensus 231 ~lv~~~~~-il~~ 242 (547)
+++++.++ ++|.
T Consensus 212 tv~~r~~~~i~p~ 224 (545)
T 3uox_A 212 YVFQRTPNWCTPL 224 (545)
T ss_dssp EEEESSCCCCEEC
T ss_pred EEEEcCCCccccC
Confidence 99999997 3443
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=6.2e-26 Score=245.04 Aligned_cols=176 Identities=13% Similarity=0.184 Sum_probs=121.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCCh--------------hhh------------hccccCc
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLL--------------PSV------------TCGTVEA 79 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l--------------~~~------------~~g~~~~ 79 (547)
..+++|||||||++|+++|..|++.|++|+|||+++.++.+... +.. .......
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 34579999999999999999999999999999997655422110 000 0001122
Q ss_pred cccchhHHHHHHhCCC--cEEEEEEEEEEEECCCC----EEEEecCCCCCCceeeeecCEEEEccC--CCccCCCCCCcc
Q 041537 80 RSIAEPVRNIIKKRNA--EIQFWEAEAIKIDAAKN----EVFCKSNIDKETRDFSLEYDYLIIAVG--AQVNTFGTPGVL 151 (547)
Q Consensus 80 ~~~~~~~~~~~~~~~~--~v~~~~~~v~~id~~~~----~v~~~~~~~~g~~~~~i~yD~LViAtG--~~~~~~~ipG~~ 151 (547)
.++...++..+++.++ +++ ...+|+.++.+.+ .|.+.+ |. ++.||+||+|+| +.|..|.+||++
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~----G~---~i~ad~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDR----GD---EVSARFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETT----CC---EEEEEEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECC----CC---EEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 3455567777788775 454 3668888876665 555544 44 799999999999 889999999986
Q ss_pred cccc-ccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceE
Q 041537 152 ENCH-FLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRI 230 (547)
Q Consensus 152 e~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 230 (547)
+..- .+++.. ... ......+++|+|||+|.+|+|+|.+|++. +.+|
T Consensus 171 ~f~g~~~~~~~-----------------~~~--~~~~~~~krV~VIG~G~sgve~a~~l~~~--------------~~~V 217 (549)
T 4ap3_A 171 RFTGDIVHTAR-----------------WPH--DGVDFTGKRVGVIGTGSSGIQSIPIIAEQ--------------AEQL 217 (549)
T ss_dssp GCCSEEEEGGG-----------------CCT--TCCCCBTCEEEEECCSHHHHHHHHHHHHH--------------BSEE
T ss_pred cCCCceEEecc-----------------ccc--cccccCCCEEEEECCCchHHHHHHHHHhh--------------CCEE
Confidence 4211 111100 000 00112567999999999999999999987 5799
Q ss_pred EEEecCCcc-CCc
Q 041537 231 TLIQSGDHI-LNS 242 (547)
Q Consensus 231 ~lv~~~~~i-l~~ 242 (547)
+++++.+.+ +|.
T Consensus 218 tv~~r~~~~ilp~ 230 (549)
T 4ap3_A 218 FVFQRSANYSIPA 230 (549)
T ss_dssp EEEESSCCCEEEC
T ss_pred EEEECCCCccccC
Confidence 999999973 444
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=2.1e-24 Score=233.62 Aligned_cols=172 Identities=17% Similarity=0.237 Sum_probs=112.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC---hh-----------hhh------------ccccCcc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL---LP-----------SVT------------CGTVEAR 80 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~---l~-----------~~~------------~g~~~~~ 80 (547)
...+|+|||||++|+++|..|++.|++|+|||+++.++.+.. .+ .+. .......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 457999999999999999999999999999999876532110 00 000 0001112
Q ss_pred ccchhHHHHHHhCC--CcEEEEEEEEEEEECCC--C--EEEEecCCCCCCceeeeecCEEEEccC--CCccCCCCCCccc
Q 041537 81 SIAEPVRNIIKKRN--AEIQFWEAEAIKIDAAK--N--EVFCKSNIDKETRDFSLEYDYLIIAVG--AQVNTFGTPGVLE 152 (547)
Q Consensus 81 ~~~~~~~~~~~~~~--~~v~~~~~~v~~id~~~--~--~v~~~~~~~~g~~~~~i~yD~LViAtG--~~~~~~~ipG~~e 152 (547)
++...++.+.++.+ ..++ ...+|+.++.+. . .|.+.+ |. ++.||+||+|+| +.|..|.+||++.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~----G~---~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGIT-FHTTVTAAAFDEATNTWTVDTNH----GD---RIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEE-CSCCEEEEEEETTTTEEEEEETT----CC---EEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEE-cCcEEEEEEEcCCCCeEEEEECC----CC---EEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 23344555556554 2354 366788887543 2 344443 44 799999999999 5678888999753
Q ss_pred ccc-ccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEE
Q 041537 153 NCH-FLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRIT 231 (547)
Q Consensus 153 ~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~ 231 (547)
..- .+++. ..+. +.....+++|+|||+|.+|+|+|..+... +.+|+
T Consensus 167 f~G~~~hs~-----------------~~~~--~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--------------~~~vt 213 (542)
T 1w4x_A 167 FAGNLYHTG-----------------NWPH--EPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--------------AAELF 213 (542)
T ss_dssp CCSEEEEGG-----------------GCCS--SCCCCBTCEEEEECCSHHHHHHHHHHHHH--------------BSEEE
T ss_pred CCCceEECC-----------------CCCC--chhccCCCEEEEECCCccHHHHHHHHhhc--------------CceEE
Confidence 210 01110 0000 00013567999999999999999999986 57999
Q ss_pred EEecCCcc
Q 041537 232 LIQSGDHI 239 (547)
Q Consensus 232 lv~~~~~i 239 (547)
++++.+..
T Consensus 214 v~~r~~~~ 221 (542)
T 1w4x_A 214 VFQRTPHF 221 (542)
T ss_dssp EEESSCCC
T ss_pred EEEcCCcc
Confidence 99988765
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.85 E-value=2.7e-20 Score=171.47 Aligned_cols=127 Identities=24% Similarity=0.314 Sum_probs=104.5
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---------Ccc-----cHHHHHHHHHHHHh
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------NSF-----DERISSFAEKKFQR 257 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------~~~-----~~~~~~~~~~~l~~ 257 (547)
+++|||||++|+|+|..|.+. +.+|+++++.+.++ |.+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~--------------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARA--------------GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHC--------------CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999985 68999999998776 334 57889999999999
Q ss_pred CCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC--CCCccEEeCCCCCcCCCC
Q 041537 258 DGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ--GKRRVLATNEWLRVKECE 333 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~ 333 (547)
.||+++++ +|++++. +.+.+.. .+| + +++|.||+|+|.. |. +.+.+++ + +|.|.||+++|+ +.|
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~-~~g-~--i~ad~vI~A~G~~--~~---~~~~~g~~~~-~g~i~vd~~~~t-~~~ 136 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVET-EEG-V--EKAERLLLCTHKD--PT---LPSLLGLTRR-GAYIDTDEGGRT-SYP 136 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEEC-SSC-E--EEEEEEEECCTTC--CH---HHHHHTCCEE-TTEECCCTTCBC-SST
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEE-CCC-E--EEECEEEECCCCC--CC---ccccCCCCcc-CceEEeCCCCCc-CCC
Confidence 99999999 9999864 3455543 345 3 9999999999964 43 3344454 5 889999999999 899
Q ss_pred CEEEeCccCcc
Q 041537 334 NVYALGDCATI 344 (547)
Q Consensus 334 ~VfaiGD~a~~ 344 (547)
+|||+|||+..
T Consensus 137 ~i~a~GD~~~~ 147 (180)
T 2ywl_A 137 RVYAAGVARGK 147 (180)
T ss_dssp TEEECGGGGTC
T ss_pred CEEEeecccCc
Confidence 99999999863
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.77 E-value=1e-17 Score=179.14 Aligned_cols=283 Identities=12% Similarity=0.153 Sum_probs=166.0
Q ss_pred CCCCCeEEEECCchHHHHHHHhcCC--------------CCCeEEEEcCCCCCccCCC--hhhhhcc-------------
Q 041537 25 EREKKRVVLLGTGWAGISFLKDLDV--------------SSYDVQVVSPQNYFAFTPL--LPSVTCG------------- 75 (547)
Q Consensus 25 ~~~~~~VvIIGgG~aGl~aA~~L~~--------------~g~~Vtlid~~~~~~~~p~--l~~~~~g------------- 75 (547)
....+||||||+||+||++|..|.+ .+...+.+|+.+.|.|.+. ++.....
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCC
Confidence 3455799999999999999988752 2346788999988877542 2211000
Q ss_pred -------------------------ccCccccchhHHHHHHhCCCcEEEEEEEEEEEECCC----------CEEEEecCC
Q 041537 76 -------------------------TVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAK----------NEVFCKSNI 120 (547)
Q Consensus 76 -------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~----------~~v~~~~~~ 120 (547)
.....++..+++.+.++.+..++| ..+|+.+.+.. -+|++.+..
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf-~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAY-GEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEE-SEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEc-ceEEEeeccccccccccccceEEEEEecCC
Confidence 001123444556666666655765 66888886422 145555432
Q ss_pred CCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCCh
Q 041537 121 DKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGP 200 (547)
Q Consensus 121 ~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~ 200 (547)
......+.+++||+|||..|..|+.++....++ ++.+ ........ . .....+|+|+|||+|.
T Consensus 195 --~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~--Hss~----y~~~~~~~-~---------~~~~~gKrV~VVG~G~ 256 (501)
T 4b63_A 195 --TGEISARRTRKVVIAIGGTAKMPSGLPQDPRII--HSSK----YCTTLPAL-L---------KDKSKPYNIAVLGSGQ 256 (501)
T ss_dssp --TCCEEEEEEEEEEECCCCEECCCTTSCCCTTEE--EGGG----HHHHHHHH-S---------CCTTSCCEEEEECCSH
T ss_pred --CceEEEEEeCEEEECcCCCCCCCCCCCCCccee--eccc----cccchhhc-c---------ccccCCcEEEEECCcH
Confidence 222457899999999998887776554433222 2211 11111100 0 0124678999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc---------ccHHHHH-----------H----------
Q 041537 201 TGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS---------FDERISS-----------F---------- 250 (547)
Q Consensus 201 ~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------~~~~~~~-----------~---------- 250 (547)
||+|++.+|.+.. ...+|+++.|.+.+.|. +.++..+ .
T Consensus 257 SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~ 324 (501)
T 4b63_A 257 SAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNY 324 (501)
T ss_dssp HHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTS
T ss_pred HHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhh
Confidence 9999999998752 25799999998765442 1111111 1
Q ss_pred ----------HHHHH-----H-----hCCcEEEcCceEEEEeC----CeEEEEe-----------ccCCeEEEEeeceEE
Q 041537 251 ----------AEKKF-----Q-----RDGIEVLTECRVVNVSD----KEITMKI-----------KSTGAVCSIPHGLVL 295 (547)
Q Consensus 251 ----------~~~~l-----~-----~~GV~v~~~~~V~~v~~----~~v~~~~-----------~~~G~~~~i~~D~vv 295 (547)
+.+.+ . .....+..+..+..++. ..+.+.. ..+|++ +++|.||
T Consensus 325 ~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~--~~~D~VI 402 (501)
T 4b63_A 325 SVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKET--LEVDALM 402 (501)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCE--EEESEEE
T ss_pred cccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeE--EECCEEE
Confidence 11111 0 01234566666666643 1222211 123554 9999999
Q ss_pred EccCCCCCcchHHHHH---HhCCCCCccEEeCCCCCcC-------CCCCEEEeCcc
Q 041537 296 WSTGVGTRPAIKDFME---QIGQGKRRVLATNEWLRVK-------ECENVYALGDC 341 (547)
Q Consensus 296 ~a~G~~~~p~~~~l~~---~~~~~~~g~i~Vd~~l~~~-------~~~~VfaiGD~ 341 (547)
+|||+++.... .|.. .+..+.+|++.|+.+++.. ..++||+.|-|
T Consensus 403 ~ATGy~~~~p~-~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 403 VATGYNRNAHE-RLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp ECCCEECCTHH-HHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred ECcCCCCCCcc-hhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 99998654321 3322 2233677888998877652 23569999944
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.54 E-value=9e-14 Score=133.22 Aligned_cols=95 Identities=17% Similarity=0.126 Sum_probs=71.1
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-----------------cCCcc-------cHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-----------------ILNSF-------DERI 247 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-----------------il~~~-------~~~~ 247 (547)
.|+|||||++|+++|..|++. +.+|+++++... ++..+ ...+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~--------------g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQK--------------GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 799999999999999999985 689999998731 11111 2366
Q ss_pred HHHHHHHHHhC-CcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCCCCC
Q 041537 248 SSFAEKKFQRD-GIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGVGTR 303 (547)
Q Consensus 248 ~~~~~~~l~~~-GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~ 303 (547)
.+.+.+.+++. ||+++ +++|+++. ++.+......+|+. +++|.||+|+|....
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~--i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP--ARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC--EECSEEEECCTTCSS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE--EECCEEEECCCCChh
Confidence 77888888887 99999 56899885 44443223345654 999999999997433
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.49 E-value=8.8e-15 Score=155.19 Aligned_cols=257 Identities=15% Similarity=0.149 Sum_probs=141.9
Q ss_pred eEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC----------Ch----hh------------------------
Q 041537 30 RVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP----------LL----PS------------------------ 71 (547)
Q Consensus 30 ~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p----------~l----~~------------------------ 71 (547)
||||||||+||+++|..|++.|.+|+|||+. ...... +. +.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999899999999997 221110 00 00
Q ss_pred --------h-----h--------ccccCc----------cccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEE---EEe
Q 041537 72 --------V-----T--------CGTVEA----------RSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEV---FCK 117 (547)
Q Consensus 72 --------~-----~--------~g~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v---~~~ 117 (547)
+ . .+...+ ..+...+.+.+++.++++ +...+| .+..++..+ .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i-~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI-IEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE-ECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE-EECcEE-EEEEeCCEEEEEEEE
Confidence 0 0 000000 112233444455667444 234457 887666654 333
Q ss_pred cCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEc
Q 041537 118 SNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVG 197 (547)
Q Consensus 118 ~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG 197 (547)
+. + .++.+|.+|+|||+.+..+.++.... ..+- +...+-.+.-. ...+.+. .+...+++++|
T Consensus 158 ~~---~---g~~~a~~VVlAtGg~~~~~~~~~~~~----~~tG-dgi~~a~~aGa--~~~d~e~-----~q~~p~~~~~g 219 (472)
T 2e5v_A 158 KR---G---LVEDVDKLVLATGGYSYLYEYSSTQS----TNIG-DGMAIAFKAGT--ILADMEF-----VQFHPTVTSLD 219 (472)
T ss_dssp TT---E---EECCCSEEEECCCCCGGGSSSBSSCT----TCSC-HHHHHHHHTTC--CEECTTC-----EEEEEEEECGG
T ss_pred eC---C---CeEEeeeEEECCCCCcccCccccCCC----CCch-HHHHHHHHcCC--CEeCCcc-----eEEEeEEEccC
Confidence 21 1 15779999999999886655432111 0111 11110000000 0001110 01112445667
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHH--------HHHHHHHHHhCCcEEEcCceEE
Q 041537 198 GGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERI--------SSFAEKKFQRDGIEVLTECRVV 269 (547)
Q Consensus 198 gG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~--------~~~~~~~l~~~GV~v~~~~~V~ 269 (547)
+| +++++..+... +..+ +.+.++++++.+++.. ...+.+.+++.|. ++++...
T Consensus 220 gg--~~~~ae~~~~~--------------G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~- 280 (472)
T 2e5v_A 220 GE--VFLLTETLRGE--------------GAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK- 280 (472)
T ss_dssp GC--CEECCTHHHHT--------------TCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT-
T ss_pred CC--ceeeehhhcCC--------------ceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc-
Confidence 66 78877766543 4555 8889999987665543 5666677776653 3222110
Q ss_pred EEeCCeEEEEeccCCeEEEEe-eceEEEccCCCCCcchHHHHHH--hCCCCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 270 NVSDKEITMKIKSTGAVCSIP-HGLVLWSTGVGTRPAIKDFMEQ--IGQGKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 270 ~v~~~~v~~~~~~~G~~~~i~-~D~vv~a~G~~~~p~~~~l~~~--~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+. . + .+ .++ .+.++++.|+.+. .+..- ......|+|.||+++|| +.|+|||+|||+.
T Consensus 281 -~~--~--~-----~~--~~~~~~~~~~~~G~dp~----~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 281 -IE--D--F-----ER--KFPVVAKYLARHGHNYK----VKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp -CT--T--H-----HH--HCHHHHHHHHHTTCCTT----SCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred -hH--H--H-----HH--HhHHHHHHHHHhCcCcc----cceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 00 0 0 11 144 4677778886443 11111 11234688999999999 8999999999987
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.39 E-value=2.8e-15 Score=151.39 Aligned_cols=229 Identities=11% Similarity=0.023 Sum_probs=129.0
Q ss_pred CCeEEEECCchHHHHHHHhcC--CCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLD--VSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~--~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
.+||+|||||||||+||.+|+ +.|++|+|||++++.++........ ++...+......+++..++++. .
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~---~~~~~l~~~~~~~~~e~Gv~~~--~---- 135 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL---FSAMVMRKPAHLFLQELEIPYE--D---- 135 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT---CCCEEEETTTHHHHHHTTCCCE--E----
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc---CCHHHHHHHHHHHHHHcCCEEE--E----
Confidence 358999999999999999996 5799999999998877654432211 1223344456677788874332 1
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCCccccccccCCHHHHHHHHHHHHHHHHHccCCCCCHH
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEE 185 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 185 (547)
... .....+.++++++..+..+.+||...... ....+ +..+ ..
T Consensus 136 ----~~~--------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~----------~~~~-------~~ 178 (326)
T 3fpz_A 136 ----EGD--------------YVVVKHAALFISTVLSKVLQLPNVKLFNA--TCVED----------LVTR-------PP 178 (326)
T ss_dssp ----CSS--------------EEEESCHHHHHHHHHHHHHTSTTEEEETT--EEEEE----------EEEE-------SS
T ss_pred ----CCc--------------ceecceeEEEEcchhhhccccccceeecc--cccce----------eecc-------CC
Confidence 111 13334445566666666667777542100 00000 0000 00
Q ss_pred HHhccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcC
Q 041537 186 ERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTE 265 (547)
Q Consensus 186 ~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~ 265 (547)
.....++++|+|+|.++++.|..+..+ ..+++++.+.......... .. ..
T Consensus 179 ~~~~~~~v~viggg~~av~~a~~~~~~--------------~~~v~i~~~~~~~~~~~~~----------~~-~~----- 228 (326)
T 3fpz_A 179 TEKGEVTVAGVVTNWTLVTQAHGTQCA--------------MDPNVIELAGYKNDGTRDL----------SQ-KH----- 228 (326)
T ss_dssp CSSSSCEEEEEEEEEHHHHTCTTSSSC--------------CCCEEEEESCBCTTSSBCT----------TS-CC-----
T ss_pred cccCCCEEEEEccCceeeehhhhhhhc--------------cCcEEEEeecccccccccc----------ee-ec-----
Confidence 113456999999999999988766543 5688888777654322110 00 00
Q ss_pred ceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCCCCCcCCCCCEEEeCccCcc
Q 041537 266 CRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATI 344 (547)
Q Consensus 266 ~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 344 (547)
..+....+....... .+....+++|.+..+.|..+.. ..+. .+.|.+|..++| +.|+|||+||++..
T Consensus 229 ~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~--~~~~-------e~~iv~~~~~~t-~vpGv~aaGDaa~~ 295 (326)
T 3fpz_A 229 GVILSTTGHDGPFGA--FCAKRIVDIDQNQKLGGMKGLD--MNHA-------EHDVVIHSGAYA-GVDNMYFAGMEVAE 295 (326)
T ss_dssp CEEEECCCSCSSSCS--HHHHHHHHHCTTCCCCCCCCBC--HHHH-------HHHHHHHCEECT-TSBTEEECTHHHHH
T ss_pred ceEEEEecceeeEee--cceeEEEecCceeeecceeccc--cccc-------CCeEEECCCeEE-CCCCEEEEchHhcc
Confidence 111111111100000 0111235667777777754322 1222 234677778888 89999999999863
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=2.4e-12 Score=133.50 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=33.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
.++|+|||||++|+++|..|++.|.+|+|||+++..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998754
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.04 E-value=1.4e-09 Score=113.56 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccC--------CCCCcchHHH-HHHhC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTG--------VGTRPAIKDF-MEQIG 314 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G--------~~~~p~~~~l-~~~~~ 314 (547)
.+...+...+++.| +|+++++|++|+. +++.+.. .+|+. +.+|.||+|+| +. |.+... .+.+.
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vi~a~~~~~l~~i~~~--p~l~~~~~~~~~ 278 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTV-KDGHA--FQAHSVIVATPMNTWRRIVFT--PALPERRRSVIE 278 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEE-TTSCC--EEEEEEEECSCGGGGGGSEEE--SCCCHHHHHHHH
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEE-CCCCE--EEeCEEEEecCcchHhheeeC--CCCCHHHHHHHH
Confidence 34555556666778 9999999999964 4566654 44654 99999999999 42 222122 22222
Q ss_pred C-CCCccEEeCCCCCcCCCCCEEEeCccCc
Q 041537 315 Q-GKRRVLATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 315 ~-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
. .....+.|+..+++ ..++||+.||+..
T Consensus 279 ~~~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 279 EGHGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp HCCCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred hCCCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 2 22335899999998 6799999999854
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.00 E-value=5.1e-10 Score=102.28 Aligned_cols=107 Identities=10% Similarity=0.083 Sum_probs=74.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC-CCh---hhhhccccCccccchhHHHHHHhCCCcEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT-PLL---PSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAE 103 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~-p~l---~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 103 (547)
+++|+|||||++|+++|..|++.|.+|+|||+++..... ..+ +.++ ......++...+.+.+++.+ ++++.++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g--v~v~~~~ 77 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLL-DEPSGEELLRRLEAHARRYG--AEVRPGV 77 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCT-TCCCHHHHHHHHHHHHHHTT--CEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCc-CCCCHHHHHHHHHHHHHHcC--CEEEeCE
Confidence 368999999999999999999999999999998743221 000 1110 11223455666777888888 4555558
Q ss_pred EEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCcc
Q 041537 104 AIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVN 143 (547)
Q Consensus 104 v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~ 143 (547)
|+.++.++..+.+... +. ++++|+||+|+|..++
T Consensus 78 v~~i~~~~~~~~v~~~---~g---~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 78 VKGVRDMGGVFEVETE---EG---VEKAERLLLCTHKDPT 111 (180)
T ss_dssp CCEEEECSSSEEEECS---SC---EEEEEEEEECCTTCCH
T ss_pred EEEEEEcCCEEEEEEC---CC---EEEECEEEECCCCCCC
Confidence 8899876554443321 11 7999999999999863
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.00 E-value=3.6e-10 Score=108.02 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=76.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh---hccc----c------CccccchhHHHHHHhC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV---TCGT----V------EARSIAEPVRNIIKKR 93 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~---~~g~----~------~~~~~~~~~~~~~~~~ 93 (547)
+.++|+|||||++|+++|..|++.|.+|+|||++......+..+.. ..+. + +...+...+.+.+++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~ 81 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGL 81 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcC
Confidence 3579999999999999999999999999999997322111111000 0000 0 1123344455666665
Q ss_pred -CCcEEEEEEEEEEEECCCCEE---EEecCCCCCCceeeeecCEEEEccCCCccCCCCCCcc
Q 041537 94 -NAEIQFWEAEAIKIDAAKNEV---FCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVL 151 (547)
Q Consensus 94 -~~~v~~~~~~v~~id~~~~~v---~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG~~ 151 (547)
+ +++++++|++++.++..+ .+.+ |. ++.+|+||+|+|...+....+|..
T Consensus 82 ~g--v~i~~~~v~~i~~~~~~v~~v~~~~----g~---~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 82 RP--LHLFQATATGLLLEGNRVVGVRTWE----GP---PARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp TT--EEEEECCEEEEEEETTEEEEEEETT----SC---CEECSEEEECCTTCSSCEEEETTE
T ss_pred CC--cEEEEeEEEEEEEeCCEEEEEEECC----CC---EEECCEEEECCCCChhhceecCCc
Confidence 6 677788999998765543 3332 43 799999999999977655455544
No 102
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.98 E-value=3.6e-09 Score=104.27 Aligned_cols=139 Identities=15% Similarity=0.159 Sum_probs=89.1
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS---------------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------------------------- 242 (547)
..|+|||||++|+.+|..|++. ++.+|+++++.+.+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~-------------~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN-------------PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-------------TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred cCEEEECccHHHHHHHHHHHHc-------------CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 3799999999999999999862 26899999998754211
Q ss_pred ----------ccHHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCeE---EEEec----c--C---CeEEEEeeceEEEc
Q 041537 243 ----------FDERISSFAEKKFQR-DGIEVLTECRVVNVS--DKEI---TMKIK----S--T---GAVCSIPHGLVLWS 297 (547)
Q Consensus 243 ----------~~~~~~~~~~~~l~~-~GV~v~~~~~V~~v~--~~~v---~~~~~----~--~---G~~~~i~~D~vv~a 297 (547)
....+...+.+.+.+ .||+++++++|+++. ++.+ .+... . + |+..++++|.||.|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123455566666665 699999999999985 3433 33210 0 1 23345999999999
Q ss_pred cCCCCC--cchHHHHHHhC----CCCCccEEeCC-------CCCcCCCCCEEEeCccCc
Q 041537 298 TGVGTR--PAIKDFMEQIG----QGKRRVLATNE-------WLRVKECENVYALGDCAT 343 (547)
Q Consensus 298 ~G~~~~--p~~~~l~~~~~----~~~~g~i~Vd~-------~l~~~~~~~VfaiGD~a~ 343 (547)
+|..+. ++...+...++ +.....+.++. ..++ ..|++|++||++.
T Consensus 187 tG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp CCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred CCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 995322 22223332322 22222233332 2334 5699999999864
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.87 E-value=2.9e-09 Score=115.11 Aligned_cols=115 Identities=12% Similarity=0.168 Sum_probs=75.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC-CCccCCChh------------hh--hcc-----------------
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN-YFAFTPLLP------------SV--TCG----------------- 75 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~-~~~~~p~l~------------~~--~~g----------------- 75 (547)
.+||||||||+||++||..|++.|.+|+|||++. ..+..+..+ .+ ..+
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 5799999999999999999999999999999874 222111100 00 000
Q ss_pred ------------ccCccccchhHHHHHHh-CCCcEEEEEEEEEEEECCCCE---EEEecCCCCCCceeeeecCEEEEccC
Q 041537 76 ------------TVEARSIAEPVRNIIKK-RNAEIQFWEAEAIKIDAAKNE---VFCKSNIDKETRDFSLEYDYLIIAVG 139 (547)
Q Consensus 76 ------------~~~~~~~~~~~~~~~~~-~~~~v~~~~~~v~~id~~~~~---v~~~~~~~~g~~~~~i~yD~LViAtG 139 (547)
..+...+...+.+.++. .+ +++++++|+++..++.. |.+.+ |. .+.+|.||+|||
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~G--V~I~~~~V~~L~~e~g~V~GV~t~d----G~---~I~Ad~VVLATG 178 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPN--LMIFQQAVEDLIVENDRVVGAVTQM----GL---KFRAKAVVLTVG 178 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEESSSBEEEEEETT----SE---EEEEEEEEECCS
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCC--CEEEEEEEEEEEecCCEEEEEEECC----CC---EEECCEEEEcCC
Confidence 00001122334555555 45 77788999999766553 33433 43 799999999999
Q ss_pred CCccCCCCCCcc
Q 041537 140 AQVNTFGTPGVL 151 (547)
Q Consensus 140 ~~~~~~~ipG~~ 151 (547)
+.+..+.++|..
T Consensus 179 t~s~~~~i~G~~ 190 (651)
T 3ces_A 179 TFLDGKIHIGLD 190 (651)
T ss_dssp TTTCCEEECC--
T ss_pred CCccCccccCcc
Confidence 988777777753
No 104
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.86 E-value=6.4e-09 Score=110.85 Aligned_cols=53 Identities=21% Similarity=0.135 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEE--eCCeEEEEeccCCeEEEEeeceEEEccC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNV--SDKEITMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
..+.+.+.+.+++.|++|+++++|++| ++++++...+.+|++ +.||.||.+++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~--~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRR--FLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcE--EEcCEEEECCC
Confidence 467888889999999999999999998 466666555566876 99999999887
No 105
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.76 E-value=1e-08 Score=105.19 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=70.4
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCC-----------------hhhhhc-------------c
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPL-----------------LPSVTC-------------G 75 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~-----------------l~~~~~-------------g 75 (547)
+++++|+|||||++|+++|..|++.|++|+|||+.+....... ...+.. |
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 4467999999999999999999999999999999876432110 000000 0
Q ss_pred --------------ccCccccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCC
Q 041537 76 --------------TVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQ 141 (547)
Q Consensus 76 --------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~ 141 (547)
.++...+...+.+.+.+.++++. ...+|+.++.+. .|++.+ |. ++.+|+||.|+|..
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~-~v~~~~----g~---~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDIS-VNSEAVAADPVG-RLTLQT----GE---VLEADLIVGADGVG 159 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEE-SSCCEEEEETTT-EEEETT----SC---EEECSEEEECCCTT
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEeCC-EEEECC----CC---EEEcCEEEECCCcc
Confidence 00001122334555666664442 355788888755 676654 44 79999999999987
Q ss_pred c
Q 041537 142 V 142 (547)
Q Consensus 142 ~ 142 (547)
+
T Consensus 160 s 160 (379)
T 3alj_A 160 S 160 (379)
T ss_dssp C
T ss_pred H
Confidence 5
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.74 E-value=1.2e-08 Score=109.84 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=77.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC-CCccCCCh------------hhh--hcc-----------------
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN-YFAFTPLL------------PSV--TCG----------------- 75 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~-~~~~~p~l------------~~~--~~g----------------- 75 (547)
.+||||||||+||++||..|++.|.+|+|||++. ..+..+.. ..+ ..+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5799999999999999999999999999999974 22211100 000 000
Q ss_pred ------------ccCccccchhHHHHHHh-CCCcEEEEEEEEEEEECCCCE---EEEecCCCCCCceeeeecCEEEEccC
Q 041537 76 ------------TVEARSIAEPVRNIIKK-RNAEIQFWEAEAIKIDAAKNE---VFCKSNIDKETRDFSLEYDYLIIAVG 139 (547)
Q Consensus 76 ------------~~~~~~~~~~~~~~~~~-~~~~v~~~~~~v~~id~~~~~---v~~~~~~~~g~~~~~i~yD~LViAtG 139 (547)
..+...+...+.+.+.. .+ +++++++|+++..++.. |.+.+ |. .+.+|.||+|||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~G--VeI~~~~Vt~L~~e~g~V~GV~t~d----G~---~i~AdaVVLATG 177 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQEN--LYIKQEEVVDIIVKNNQVVGVRTNL----GV---EYKTKAVVVTTG 177 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEESCEEEEEESSSBEEEEEETT----SC---EEECSEEEECCT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCC--CEEEEeEEEEEEecCCEEEEEEECC----Cc---EEEeCEEEEccC
Confidence 00011123334555655 35 77788899999876554 44433 44 899999999999
Q ss_pred CCccCCCCCCcc
Q 041537 140 AQVNTFGTPGVL 151 (547)
Q Consensus 140 ~~~~~~~ipG~~ 151 (547)
+.++.+.++|..
T Consensus 178 ~~s~~~~~~G~~ 189 (637)
T 2zxi_A 178 TFLNGVIYIGDK 189 (637)
T ss_dssp TCBTCEEEETTE
T ss_pred CCccCceeccce
Confidence 998877777754
No 107
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.71 E-value=3.6e-07 Score=94.96 Aligned_cols=53 Identities=17% Similarity=0.145 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
..+.+.+.+.+++.|++|++++.|++|. +++++.... +|+. +.+|.||+|+|.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~--~~ad~VV~a~~~ 250 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRI--HDADLVISNLGH 250 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEE--EECSEEEECSCH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEE--EECCEEEECCCH
Confidence 5688888899999999999999999985 455552222 3664 999999999983
No 108
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.71 E-value=3.1e-07 Score=93.15 Aligned_cols=65 Identities=6% Similarity=0.152 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce-EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHh
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVSD--KE-ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQI 313 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~-v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~ 313 (547)
+..+.+.+.+.+++.|++++++++|++++. ++ +.+.. .+|+..++.+|.||+|+|. +...+...+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~~~~~a~~VV~A~G~----~s~~l~~~~ 216 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDF-GGAEPMTLSCRVLINAAGL----HAPGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEE-CTTSCEEEEEEEEEECCGG----GHHHHHHTE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEE-CCCceeEEEeCEEEECCCc----chHHHHHHh
Confidence 457888888999999999999999999964 33 55443 4564335999999999994 344555555
No 109
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=6.4e-09 Score=110.79 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=99.5
Q ss_pred ecCEEEEccCCCccCCCCCCcc-ccccccCCHHHHHHHHHHHHHHHHHccCCCCCHHHHhccccEEEEcCChhHHHHHHH
Q 041537 130 EYDYLIIAVGAQVNTFGTPGVL-ENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAE 208 (547)
Q Consensus 130 ~yD~LViAtG~~~~~~~ipG~~-e~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~ 208 (547)
.||.+++++|+.+..+++++.. +..+..+...+..++... +................|+|||||++|+.+|..
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~ 110 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDK------RASQPVYQQGQACTNTKCLVVGAGPCGLRAAVE 110 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHH------HHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhh------hhccccccCccccCCCCEEEECccHHHHHHHHH
Confidence 5789999999998766665543 334444455554433100 000000000111234689999999999999999
Q ss_pred HHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-----cc----------------------------HHHHHHHHHHH
Q 041537 209 LHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-----FD----------------------------ERISSFAEKKF 255 (547)
Q Consensus 209 l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-----~~----------------------------~~~~~~~~~~l 255 (547)
|++. +.+|+||++.+.+... .+ ..+.+.+.+.+
T Consensus 111 La~~--------------G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 176 (497)
T 2bry_A 111 LALL--------------GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVA 176 (497)
T ss_dssp HHHT--------------TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHH
T ss_pred HHHC--------------CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHH
Confidence 9975 7899999998764210 11 45667778888
Q ss_pred HhCCcEEEcCceEEEEeC-----CeEEEEec-c-CCeEEEEeeceEEEccCCCC
Q 041537 256 QRDGIEVLTECRVVNVSD-----KEITMKIK-S-TGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~-----~~v~~~~~-~-~G~~~~i~~D~vv~a~G~~~ 302 (547)
++.||+++++++|++++. +.+.+... . +|+..++.+|.||.|+|..+
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 889999999999999974 22333221 2 35222499999999999644
No 110
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.68 E-value=6.1e-08 Score=100.88 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=42.5
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
...+.+.+.+.+++.|++|+++++|++++. +++ +. .+|+. +.+|.||+|+|.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~--~~g~~--~~ad~Vv~a~~~ 241 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YT--RDNEE--YSFDVAISNVGV 241 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EE--TTCCE--EECSEEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EE--eCCcE--EEeCEEEECCCH
Confidence 357888899999999999999999999964 456 32 34654 999999999993
No 111
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.67 E-value=2.5e-08 Score=107.71 Aligned_cols=118 Identities=16% Similarity=0.239 Sum_probs=75.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC-CCccCCChh------------hh--hcc---------------
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN-YFAFTPLLP------------SV--TCG--------------- 75 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~-~~~~~p~l~------------~~--~~g--------------- 75 (547)
...+||+|||||+||++||..|++.|.+|+|||++. ..+..+..+ .+ ..+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 345899999999999999999999999999999874 222111000 00 000
Q ss_pred --------------ccCccccchhHHHHHHhC-CCcEEEEEEEEEEEECCCCEEE-EecCCCCCCceeeeecCEEEEccC
Q 041537 76 --------------TVEARSIAEPVRNIIKKR-NAEIQFWEAEAIKIDAAKNEVF-CKSNIDKETRDFSLEYDYLIIAVG 139 (547)
Q Consensus 76 --------------~~~~~~~~~~~~~~~~~~-~~~v~~~~~~v~~id~~~~~v~-~~~~~~~g~~~~~i~yD~LViAtG 139 (547)
..+...+...+.+.++.. + +++++++|+++..++..|. +... +|. .+.+|.||+|||
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~G--V~I~~~~V~~L~~d~g~V~GV~t~--~G~---~i~Ad~VVLATG 171 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPN--IDLLQDTVIGVSANSGKFSSVTVR--SGR---AIQAKAAILACG 171 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEEETTEEEEEEET--TSC---EEEEEEEEECCT
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCC--CEEEeeEEEEEEecCCEEEEEEEC--CCc---EEEeCEEEECcC
Confidence 001112233345555553 5 7778889999877666543 2211 144 899999999999
Q ss_pred CCccCCCCCCc
Q 041537 140 AQVNTFGTPGV 150 (547)
Q Consensus 140 ~~~~~~~ipG~ 150 (547)
+.++...++|.
T Consensus 172 ~~s~~~i~~G~ 182 (641)
T 3cp8_A 172 TFLNGLIHIGM 182 (641)
T ss_dssp TCBTCEEEETT
T ss_pred CCCCccceeee
Confidence 98765544443
No 112
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.63 E-value=2.8e-08 Score=103.29 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=70.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC---------------Chhhhh------------------
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP---------------LLPSVT------------------ 73 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p---------------~l~~~~------------------ 73 (547)
..+||+|||||++|+++|..|++.|++|+|+|+++..+... ....+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 45799999999999999999999999999999987642210 000000
Q ss_pred ----------------ccc----cCccccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCE
Q 041537 74 ----------------CGT----VEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDY 133 (547)
Q Consensus 74 ----------------~g~----~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~ 133 (547)
.+. ....++...+.+.+++.++.+. ...+|+.+..++..+.+... +. ++.+|+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~-~~~~V~~i~~~~~~~~V~~~---~g---~i~ad~ 178 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLR-LETSIGEVERTASGFRVTTS---AG---TVDAAS 178 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEE-CSCCEEEEEEETTEEEEEET---TE---EEEESE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEE-ECCEEEEEEEeCCEEEEEEC---Cc---EEEeeE
Confidence 000 0111233345555666674442 35688888776665555431 11 799999
Q ss_pred EEEccCCCc
Q 041537 134 LIIAVGAQV 142 (547)
Q Consensus 134 LViAtG~~~ 142 (547)
||+|+|..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999875
No 113
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.63 E-value=3.9e-08 Score=104.67 Aligned_cols=121 Identities=19% Similarity=0.237 Sum_probs=76.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC---Chhh---h--hcc------c--------cCccccc
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP---LLPS---V--TCG------T--------VEARSIA 83 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p---~l~~---~--~~g------~--------~~~~~~~ 83 (547)
...++|+|||||++||++|..|++.|++|+|||+++..+... ..+. . ..| . ....++.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 456899999999999999999999999999999987653211 0000 0 000 0 1112333
Q ss_pred hhHHHHHHhCCCcEEEEEEEEEEEECC---CC--EEEEecCCCCCCceeeeecCEEEEccCCCccCCCCCC
Q 041537 84 EPVRNIIKKRNAEIQFWEAEAIKIDAA---KN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPG 149 (547)
Q Consensus 84 ~~~~~~~~~~~~~v~~~~~~v~~id~~---~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ipG 149 (547)
..+.+.+.+.++.+. ...+|+++..+ .. .|.+.+.. +|. ..++.+|+||+|+|..+......+
T Consensus 170 ~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~~~~~~v~~~~~~-~g~-~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIH-WGVKFTGLQPPPRKGSGWRAQLQPNP-PAQ-LASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEE-ESCEEEEEECCCSTTCCBEEEEESCC-CHH-HHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEE-eCCEEEEEEEecCCCCEEEEEEEECC-CCC-EEEEEcCEEEECCCCCcccccccc
Confidence 445566666775443 35688888763 22 55553210 031 137899999999999876655444
No 114
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.62 E-value=1.1e-06 Score=90.65 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=46.8
Q ss_pred eEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 229 RITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 229 ~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
.--++......+. +..+.+.+.+.+++.|++++++++|+++.. +.+......+| . +.+|.||+|+|.
T Consensus 160 ~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~--~~a~~vV~a~G~ 228 (405)
T 2gag_B 160 MGATWQPRAGIAK--HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-T--IHAGKVALAGAG 228 (405)
T ss_dssp CEEEEETTCBBCC--HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-C--EEEEEEEECCGG
T ss_pred eeEEEeCCCccCC--HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-e--EECCEEEECCch
Confidence 3344544443332 357788888999999999999999999963 44432333445 3 999999999994
No 115
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.60 E-value=9.4e-08 Score=94.03 Aligned_cols=116 Identities=15% Similarity=0.172 Sum_probs=69.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC-CCeEEEEcCCCCCccCCChh------------------hh--hc---ccc----C
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS-SYDVQVVSPQNYFAFTPLLP------------------SV--TC---GTV----E 78 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~-g~~Vtlid~~~~~~~~p~l~------------------~~--~~---g~~----~ 78 (547)
..++|+|||||++|+++|..|++. |.+|+|||+++......... .. .. +.. +
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 346999999999999999999986 99999999987653211000 00 00 000 1
Q ss_pred ccccchhHHHHHHh-CCCcEEEE-EEEEEEEECCCCEE---EEecC----C-CCC--CceeeeecCEEEEccCCCccC
Q 041537 79 ARSIAEPVRNIIKK-RNAEIQFW-EAEAIKIDAAKNEV---FCKSN----I-DKE--TRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 79 ~~~~~~~~~~~~~~-~~~~v~~~-~~~v~~id~~~~~v---~~~~~----~-~~g--~~~~~i~yD~LViAtG~~~~~ 144 (547)
...+...+.+.+.+ .+ ++++ ..+|+.++.++..+ .+... . .++ .+...+.+|.||+|+|..+..
T Consensus 118 ~~~~~~~l~~~~~~~~g--v~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPN--VKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHHTSTT--EEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHHhcCC--CEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 11122233333333 45 5554 46889998765543 33210 0 001 112479999999999987654
No 116
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.58 E-value=1e-08 Score=111.99 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=34.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFA 64 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~ 64 (547)
.++|||||||++|+++|..|++.|++|+|||+.+...
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 5799999999999999999999999999999987655
No 117
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.57 E-value=9.3e-08 Score=97.67 Aligned_cols=63 Identities=11% Similarity=0.180 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIG 314 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~ 314 (547)
+..+...+.+.+++.|++++++++|++++ ++.+.+.. .+| . +.+|.||+|+|. +...+...++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t-~~g-~--i~a~~VV~A~G~----~s~~l~~~~g 217 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRC-DAG-S--YRAAVLVNAAGA----WCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEEC-SSE-E--EEESEEEECCGG----GHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEe-CCC-E--EEcCEEEECCCh----hHHHHHHHhC
Confidence 35778888889999999999999999884 45555543 334 3 999999999994 3334544443
No 118
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.57 E-value=1.7e-06 Score=88.50 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=55.4
Q ss_pred hCCCCC-CCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEE
Q 041537 220 LYPTVK-DLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLW 296 (547)
Q Consensus 220 ~~~~~~-~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~ 296 (547)
.+|.+. ++....++.+....+. +..+.+.+.+.+++.|++++++++|++++. +.+.+.. .+| . +.+|.||+
T Consensus 126 ~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~g-~--~~a~~vV~ 199 (389)
T 2gf3_A 126 RWPGITVPENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET-ANG-S--YTADKLIV 199 (389)
T ss_dssp HSTTCCCCTTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE-TTE-E--EEEEEEEE
T ss_pred hCCCcccCCCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe-CCC-E--EEeCEEEE
Confidence 345543 4567788877765543 357888888999999999999999999853 4565544 333 3 99999999
Q ss_pred ccCC
Q 041537 297 STGV 300 (547)
Q Consensus 297 a~G~ 300 (547)
|+|.
T Consensus 200 A~G~ 203 (389)
T 2gf3_A 200 SMGA 203 (389)
T ss_dssp CCGG
T ss_pred ecCc
Confidence 9994
No 119
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.55 E-value=1.2e-06 Score=95.00 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=33.9
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
|+.++|||||||++|+++|..|++.|++|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 4468999999999999999999999999999999864
No 120
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.54 E-value=3.7e-08 Score=101.01 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=34.7
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
|+.+||+||||||||+++|..|++.|++|+|||+++.+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 44689999999999999999999999999999997664
No 121
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.53 E-value=8.4e-08 Score=102.66 Aligned_cols=110 Identities=18% Similarity=0.247 Sum_probs=71.9
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc--------------CC------------------C-----
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF--------------TP------------------L----- 68 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~--------------~p------------------~----- 68 (547)
...++|||||||++|+++|..|++.|++|+|||+.+.... .+ +
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 3457999999999999999999999999999999854200 00 0
Q ss_pred h-----hhh-----hcc--------------ccCccccchhHHHHHHhCCCcEEEEEEEEEEEECCCCE---EEEecCCC
Q 041537 69 L-----PSV-----TCG--------------TVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNE---VFCKSNID 121 (547)
Q Consensus 69 l-----~~~-----~~g--------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~---v~~~~~~~ 121 (547)
. ..+ ..| ......+...+.+.+...++++. ...+|+.+..++.. |.+.+
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~-~~t~V~~I~~~~~~v~gV~l~~--- 260 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIR-FSTRVDDLHMEDGQITGVTLSN--- 260 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEE-SSCCEEEEEESSSBEEEEEETT---
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEEeCCEEEEEEECC---
Confidence 0 000 000 00012233445666667775543 35688888876553 44443
Q ss_pred CCCceeeeecCEEEEccCCCcc
Q 041537 122 KETRDFSLEYDYLIIAVGAQVN 143 (547)
Q Consensus 122 ~g~~~~~i~yD~LViAtG~~~~ 143 (547)
|+ ++.+|+||+|+|..++
T Consensus 261 -G~---~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 261 -GE---EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp -SC---EEECSCEEECCCTTCH
T ss_pred -CC---EEECCEEEECCCCChh
Confidence 44 7999999999999773
No 122
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.52 E-value=6e-06 Score=84.33 Aligned_cols=75 Identities=20% Similarity=0.236 Sum_probs=50.4
Q ss_pred hCCCCC-CCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEE-EEeccCCeEEEEeeceEE
Q 041537 220 LYPTVK-DLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVS--DKEIT-MKIKSTGAVCSIPHGLVL 295 (547)
Q Consensus 220 ~~~~~~-~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~-~~~~~~G~~~~i~~D~vv 295 (547)
.+|.+. ....-.++......+. +..+.+.+.+.+++.|++++++++|++++ ++.+. +.. .+| . +.+|.||
T Consensus 125 ~~p~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~-~~g-~--i~a~~VV 198 (382)
T 1y56_B 125 IVPLLDISEVIAASWNPTDGKAD--PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKT-NKG-I--IKTGIVV 198 (382)
T ss_dssp SSTTCCCTTCCEEEEETTCCEEC--HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE-TTE-E--EECSEEE
T ss_pred hCCCCCcccceEEEEcCCCeeEC--HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEE-CCc-E--EECCEEE
Confidence 345443 2333344444443322 45777888888999999999999999985 34555 443 335 3 9999999
Q ss_pred EccCC
Q 041537 296 WSTGV 300 (547)
Q Consensus 296 ~a~G~ 300 (547)
+|+|.
T Consensus 199 ~A~G~ 203 (382)
T 1y56_B 199 NATNA 203 (382)
T ss_dssp ECCGG
T ss_pred ECcch
Confidence 99994
No 123
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.46 E-value=9.5e-08 Score=97.81 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=33.4
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..+++|||||||++|+++|+.|++.|++|+|||++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3457999999999999999999999999999999753
No 124
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.45 E-value=2.4e-07 Score=95.65 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=34.1
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
++.++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 34579999999999999999999999999999998653
No 125
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.45 E-value=2.2e-07 Score=97.56 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=33.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
+.++|+|||||++|+++|..|++.|.+|+|||+.+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3479999999999999999999999999999998653
No 126
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.44 E-value=2.5e-07 Score=93.33 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=32.8
Q ss_pred CCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~~~ 63 (547)
|++|+|||||++|+++|+.|++ .|++|+|+|+++..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 4689999999999999999998 99999999998654
No 127
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.43 E-value=2e-07 Score=96.54 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=33.6
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
...++++|+|||||++||++|..|++.|++|+|||+.+..
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3445689999999999999999999999999999998653
No 128
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.43 E-value=3.8e-07 Score=94.69 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999863
No 129
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.41 E-value=2.7e-07 Score=95.24 Aligned_cols=36 Identities=22% Similarity=0.159 Sum_probs=33.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
+++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999997654
No 130
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.41 E-value=4.4e-07 Score=96.93 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=32.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 34799999999999999999999999999999986
No 131
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.39 E-value=1.8e-07 Score=101.12 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+.++|+|||||++||++|..|++.|++|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 357999999999999999999999999999998754
No 132
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.39 E-value=4e-07 Score=91.32 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=33.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
+++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 469999999999999999999999999999998643
No 133
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.38 E-value=2e-07 Score=95.89 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=33.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
++++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999998743
No 134
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.36 E-value=7.1e-07 Score=95.91 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=33.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
...+|+|||||++||++|..|++.|++|+|||+++.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 357999999999999999999999999999999764
No 135
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.36 E-value=7.7e-07 Score=98.43 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..++|||||||++|+++|+.|++.|++|+|||+++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 448999999999999999999999999999999643
No 136
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.34 E-value=3.3e-06 Score=91.14 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=49.0
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCe---EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS--DKE---ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIG 314 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~ 314 (547)
+..+...+.+.+++.|++++++++|+++. +++ +.+.+..+|+..++.++.||.|+| ++...+...++
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~~s~~l~~~~g 240 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAG----PWVDTLREKDR 240 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCG----GGHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCC----cchHHHHHhcC
Confidence 35777788888899999999999999985 344 444443356555699999999999 45545554443
No 137
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.33 E-value=6.7e-06 Score=91.01 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCe-EEEEeeceEEEccCCCCC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGA-VCSIPHGLVLWSTGVGTR 303 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~-~~~i~~D~vv~a~G~~~~ 303 (547)
+..+...+.+.+++.|++|+++++|+++. ++++.+.. .+|+ . +.+|.||+|+|....
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTF-GQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEE-C-CCCC--EEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEe-CCCcEE--EECCEEEECCCcchh
Confidence 35788888889999999999999999985 34565554 3354 4 899999999996543
No 138
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.32 E-value=1e-06 Score=95.48 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=33.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFA 64 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~ 64 (547)
..+|||||||+|||++|..|++.|++|+|||+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~g 162 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIG 162 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987653
No 139
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.31 E-value=8.3e-07 Score=93.31 Aligned_cols=102 Identities=19% Similarity=0.235 Sum_probs=75.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||++|+.+|..|++.|.+|+||++.+.+. |. ...++...+.+.+++.++++. ...+|+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~V~~i 234 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--PT---------MDLEVSRAAERVFKKQGLTIR-TGVRVTAV 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-ECCEEEEE
Confidence 4799999999999999999999999999999987632 11 112344556677777774432 24588889
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
+.+++.+.+... ++. ++++|.||+|+|.+|+...
T Consensus 235 ~~~~~~v~v~~~--~g~---~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 235 VPEAKGARVELE--GGE---VLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEETTEEEEEET--TSC---EEEESEEEECSCEEECCTT
T ss_pred EEeCCEEEEEEC--CCe---EEEcCEEEECcCCCcCCCC
Confidence 876665554421 143 8999999999999987653
No 140
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.31 E-value=1.3e-06 Score=93.03 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=70.1
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC-----------------Chhhhhc----------c---
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP-----------------LLPSVTC----------G--- 75 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p-----------------~l~~~~~----------g--- 75 (547)
.++++|+|||||++||++|..|++.|++|+|||+.+.....+ +...+.. +
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 456799999999999999999999999999999976532111 0000000 0
Q ss_pred ---ccC---c-------cccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCc
Q 041537 76 ---TVE---A-------RSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQV 142 (547)
Q Consensus 76 ---~~~---~-------~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~ 142 (547)
... + ..+..-+.+.+...+++++ ...+|++++.+...|++.-.. +.+..++.+|+||.|.|...
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~--~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIR-RGHEVLSLTDDGAGVTVEVRG--PEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEE-ETCEEEEEEEETTEEEEEEEE--TTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEE-CCcEEEEEEEcCCeEEEEEEc--CCCCEEEEeCEEEECCCcch
Confidence 000 0 0011123444555665554 356888887666655443211 22234799999999999865
No 141
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.31 E-value=2.9e-07 Score=88.33 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=35.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
..+|+|||||||||+||..|++.|++|+|||+++..+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 468999999999999999999999999999999876543
No 142
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.30 E-value=6.8e-07 Score=92.16 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=33.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.+++|+|||||++||++|..|++.|++|+|+|+++.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 457999999999999999999999999999999865
No 143
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.28 E-value=1.8e-06 Score=89.38 Aligned_cols=97 Identities=15% Similarity=0.287 Sum_probs=73.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+...-.. .+.++...+.+.+++.++++. ...+++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 213 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA----------APATLADFVARYHAAQGVDLR-FERSVTGS 213 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------SCHHHHHHHHHHHHHTTCEEE-ESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------cCHHHHHHHHHHHHHcCcEEE-eCCEEEEE
Confidence 5799999999999999999999999999999987532110 112345566777888884442 24488888
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
+ ++ .|.+.+ |. ++++|.+|+|+|.+|+.
T Consensus 214 ~-~~-~v~~~~----g~---~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 214 V-DG-VVLLDD----GT---RIAADMVVVGIGVLAND 241 (408)
T ss_dssp E-TT-EEEETT----SC---EEECSEEEECSCEEECC
T ss_pred E-CC-EEEECC----CC---EEEcCEEEECcCCCccH
Confidence 8 44 777765 54 89999999999998764
No 144
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.28 E-value=4.6e-07 Score=92.31 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=32.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+.+|+|||||++|+++|++|++.|++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 46999999999999999999999999999999753
No 145
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.28 E-value=1.6e-06 Score=91.17 Aligned_cols=113 Identities=17% Similarity=0.164 Sum_probs=69.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc--CCC--------hhhhh---------------------ccc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF--TPL--------LPSVT---------------------CGT 76 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~--~p~--------l~~~~---------------------~g~ 76 (547)
.++|+|||||++|+++|..|++.|++|+|||+.+.... .+. +.... .+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 47999999999999999999999999999999865211 100 00000 000
Q ss_pred -----------cCccccchhHHHHHHhCCCcEEEEEEEEEEEECCCCE---EEEecCCCCCCceeeeecCEEEEccCCCc
Q 041537 77 -----------VEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNE---VFCKSNIDKETRDFSLEYDYLIIAVGAQV 142 (547)
Q Consensus 77 -----------~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~---v~~~~~~~~g~~~~~i~yD~LViAtG~~~ 142 (547)
++...+...+.+.+...++++. ...+|++++.++.. |.+.+.. +|+ ..++.+|.||.|+|...
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~-~~~~v~~i~~~~~~v~gv~~~~~~-~G~-~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIW-DLTTAMKPIFEDGYVKGAVLFNRR-TNE-ELTVYSKVVVEATGYSR 162 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEE-SSEEEEEEEEETTEEEEEEEEETT-TTE-EEEEECSEEEECCGGGC
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEE-eCcEEEEEEEECCEEEEEEEEEcC-CCc-eEEEEcCEEEECcCCch
Confidence 0000111223444455664442 35688888776665 3444210 032 24799999999999865
Q ss_pred c
Q 041537 143 N 143 (547)
Q Consensus 143 ~ 143 (547)
.
T Consensus 163 ~ 163 (453)
T 3atr_A 163 S 163 (453)
T ss_dssp T
T ss_pred h
Confidence 4
No 146
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.27 E-value=1.4e-06 Score=91.06 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=32.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~~ 62 (547)
..++|||||||++|+++|++|++.|+ +|+|||+++.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 35799999999999999999999999 9999998754
No 147
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.26 E-value=9.1e-07 Score=90.97 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999999999999763
No 148
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.25 E-value=2.9e-06 Score=85.36 Aligned_cols=95 Identities=17% Similarity=0.212 Sum_probs=74.8
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---------------------Cccc------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------------NSFD------ 244 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------------~~~~------ 244 (547)
+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +.++
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~--------------g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRS--------------GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHS--------------SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 899999999999999999875 68999999987531 1111
Q ss_pred -----HHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEE-EEeccCCeEEEEeeceEEEccCCCCCc
Q 041537 245 -----ERISSFAEKKFQRDGIEVLTECRVVNVSD--KEIT-MKIKSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 245 -----~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~-~~~~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
..+.+++.+.+++.|++++++++|++++. +.+. +.. .+| . +.+|.||+|+|....|
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g-~--~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVAR-DGR-Q--WLARAVISATGTWGEA 134 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEET-TSC-E--EEEEEEEECCCSGGGB
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEe-CCC-E--EEeCEEEECCCCCCCC
Confidence 57888899999999999999999999854 4454 443 345 3 9999999999964443
No 149
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.25 E-value=2e-06 Score=88.25 Aligned_cols=98 Identities=24% Similarity=0.374 Sum_probs=73.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... ..+.++...+.+.+++.+ ++++ ..+|+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~g--v~i~~~~~v~~ 212 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLG--VRFHLGPVLAS 212 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTT--CEEEESCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcC--CEEEeCCEEEE
Confidence 679999999999999999999999999999998753211 112344566777788888 4444 457888
Q ss_pred EECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++.++.. |.+.+ |. ++++|.+|+|+|.+|+.
T Consensus 213 i~~~~~~~~v~~~~----g~---~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 213 LKKAGEGLEAHLSD----GE---VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEEETTEEEEEETT----SC---EEEESEEEECSCEEECC
T ss_pred EEecCCEEEEEECC----CC---EEECCEEEECcCCCcCH
Confidence 8765554 44433 44 89999999999998865
No 150
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.24 E-value=1.5e-06 Score=92.53 Aligned_cols=111 Identities=19% Similarity=0.238 Sum_probs=69.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC-----------------Chhhhhc----------c----
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP-----------------LLPSVTC----------G---- 75 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p-----------------~l~~~~~----------g---- 75 (547)
+.++|+|||||++||++|..|++.|++|+|||+.+.....+ +...+.. +
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 56799999999999999999999999999999976542111 0000000 0
Q ss_pred --ccC---c-------cccchhHHHHHHhCCCcEEEEEEEEEEEECCCCEE--EEecCCCCCCceeeeecCEEEEccCCC
Q 041537 76 --TVE---A-------RSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEV--FCKSNIDKETRDFSLEYDYLIIAVGAQ 141 (547)
Q Consensus 76 --~~~---~-------~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v--~~~~~~~~g~~~~~i~yD~LViAtG~~ 141 (547)
... + ..+..-+.+.+...+++++ ...+|++++.+...| ++.+ +.++.++.+|+||.|.|..
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~----~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELL-RGHTVRALTDEGDHVVVEVEG----PDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEE-ESCEEEEEEECSSCEEEEEEC----SSCEEEEEEEEEEECCCTT
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEc----CCCcEEEEeCEEEEccCcc
Confidence 000 0 0111123444555664553 356888887665544 4443 2223579999999999987
Q ss_pred c
Q 041537 142 V 142 (547)
Q Consensus 142 ~ 142 (547)
.
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 5
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.24 E-value=2.3e-06 Score=89.75 Aligned_cols=100 Identities=18% Similarity=0.265 Sum_probs=74.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 105 (547)
..++|+|||||++|+.+|..|++.|.+|+|+++.+.+.... ...++...+.+.+++.+ ++++. .+|+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~g--v~i~~~~~v~ 215 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY----------LDKEFTDVLTEEMEANN--ITIATGETVE 215 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------CCHHHHHHHHHHHHTTT--EEEEESCCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----------CCHHHHHHHHHHHHhCC--CEEEcCCEEE
Confidence 46899999999999999999999999999999987532110 11344556777788887 66554 5788
Q ss_pred EEECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 106 KIDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 106 ~id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
.++.+++ .+.++ +. ++++|.+|+|+|.+|+...
T Consensus 216 ~i~~~~~v~~v~~~-----~~---~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 216 RYEGDGRVQKVVTD-----KN---AYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp EEECSSBCCEEEES-----SC---EEECSEEEECSCEEESCGG
T ss_pred EEEccCcEEEEEEC-----CC---EEECCEEEECcCCCCChHH
Confidence 8987643 24432 33 7999999999999987643
No 152
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.23 E-value=1.3e-06 Score=94.44 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFA 64 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~ 64 (547)
...+|||||||++||++|..|++.|++|+|||+.+...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 34689999999999999999999999999999987543
No 153
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.22 E-value=1.1e-06 Score=90.55 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..+|||||||++|+++|+.|++.|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 47999999999999999999999999999998753
No 154
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=2.8e-06 Score=89.31 Aligned_cols=104 Identities=19% Similarity=0.276 Sum_probs=74.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ...++...+.+.+++.++++. ...+++.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 237 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL--SG---------FEKQMAAIIKKRLKKKGVEVV-TNALAKGA 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEE-ESEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999987532 11 113445566777888884442 34688888
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.+...+.+.-.. ++. ..++++|.+|+|+|.+|+..
T Consensus 238 ~~~~~~~~v~~~~-~g~-~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 238 EEREDGVTVTYEA-NGE-TKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEETTEEEEEEEE-TTE-EEEEEESEEEECSCEEESCS
T ss_pred EEeCCeEEEEEEe-CCc-eeEEEcCEEEECcCCCcccC
Confidence 8665444332100 011 23799999999999998764
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.21 E-value=2.9e-06 Score=89.46 Aligned_cols=105 Identities=17% Similarity=0.239 Sum_probs=74.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+. |. ...++...+.+.+++.++++. ...+++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~i 236 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL--PQ---------GDPETAALLRRALEKEGIRVR-TKTKAVGY 236 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHhcCCEEE-cCCEEEEE
Confidence 5799999999999999999999999999999987532 11 123445566777888884442 34688888
Q ss_pred ECCCCEE--EEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 108 DAAKNEV--FCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 108 d~~~~~v--~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
+.++..+ .+.+.. .|+ ..++++|.||+|+|.+|+...
T Consensus 237 ~~~~~~~~v~~~~~~-~g~-~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 237 EKKKDGLHVRLEPAE-GGE-GEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEETTEEEEEEEETT-CCS-CEEEEESEEEECSCEEESCTT
T ss_pred EEeCCEEEEEEeecC-CCc-eeEEEcCEEEECCCcccCCCC
Confidence 8765543 333110 021 237999999999999987653
No 156
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.21 E-value=2.3e-06 Score=89.66 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=32.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~~ 62 (547)
.+++|||||||++|+++|+.|++.| .+|+|||++..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~ 58 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHA 58 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCC
Confidence 4579999999999999999999989 99999999433
No 157
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.19 E-value=2e-05 Score=89.23 Aligned_cols=54 Identities=20% Similarity=0.308 Sum_probs=42.3
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+..+...+.+.+++.|++++++++|++++ ++.+....+.+| . +.||.||+|+|.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~--i~Ad~VV~AaG~ 205 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-V--IPADIVVSCAGF 205 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-E--EECSEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-E--EECCEEEECCcc
Confidence 45788888899999999999999999985 455543333345 3 999999999994
No 158
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.18 E-value=3.2e-06 Score=84.33 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=72.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---------------Ccc----cHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------NSF----DERISSFA 251 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~~----~~~~~~~~ 251 (547)
.+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +.+ ..++..++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMR--------------QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 4899999999999999999874 68999999987432 111 36778888
Q ss_pred HHHHHhCCcEEEcCceEEEEeCC---eEEEEeccCCeEEEEeeceEEEccCC
Q 041537 252 EKKFQRDGIEVLTECRVVNVSDK---EITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 252 ~~~l~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
.+.+++.|++++++++|++++.+ .+.+.. .+|+ +.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~---~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVT-NEET---HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEE-SSEE---EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEE-CCCE---EEeCEEEECCCC
Confidence 88888899999999999999643 344443 2343 999999999996
No 159
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.17 E-value=7.5e-06 Score=81.82 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=74.2
Q ss_pred hccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC----cc------------CCcc-----cHH
Q 041537 188 KRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD----HI------------LNSF-----DER 246 (547)
Q Consensus 188 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~----~i------------l~~~-----~~~ 246 (547)
....+|+|||||+.|+.+|..|.+. +.+|+++++.+ .+ .|.+ ..+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 85 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA--------------EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSE 85 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHH
Confidence 3456999999999999999999875 68999999943 11 1222 357
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeCC--eEEEEec--cCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVSDK--EITMKIK--STGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~v~~~~~--~~G~~~~i~~D~vv~a~G~~ 301 (547)
+.+++.+.+++.|++++.++ |.+++.+ .+.+... .++.. +.+|.+|+|+|..
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~--~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEP--VTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCC--EEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcE--EEeCEEEECcCCC
Confidence 88889999999999999998 9888653 4555442 23443 8999999999964
No 160
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1.8e-06 Score=90.88 Aligned_cols=101 Identities=22% Similarity=0.340 Sum_probs=74.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ...++...+.+.+++.+ ++++ ..+++.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~g--v~i~~~~~v~~ 237 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL--PT---------YDSELTAPVAESLKKLG--IALHLGHSVEG 237 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHT--CEEETTCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCC--CEEEECCEEEE
Confidence 5799999999999999999999999999999987642 11 11234455667777777 4444 458899
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
++. ++ +.+... +|+ ..++++|.||+|+|.+|+...
T Consensus 238 i~~-~~-v~v~~~--~G~-~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 238 YEN-GC-LLANDG--KGG-QLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EET-TE-EEEECS--SSC-CCEECCSCEEECCCEEECCSS
T ss_pred EEe-CC-EEEEEC--CCc-eEEEECCEEEECcCCCcCCCC
Confidence 987 44 655521 131 138999999999999987653
No 161
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.17 E-value=7.9e-06 Score=87.39 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=78.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc-------------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI------------------------------- 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i------------------------------- 239 (547)
..|+|||||+.|+.+|..|++. +.+|+++++++.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~--------------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQM--------------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHT--------------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 4899999999999999999974 6899999987532
Q ss_pred -----C------Ccc------------------------------cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeE
Q 041537 240 -----L------NSF------------------------------DERISSFAEKKFQRDGIEVLTECRVVNVSD--KEI 276 (547)
Q Consensus 240 -----l------~~~------------------------------~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v 276 (547)
+ +.+ ...+.+.+.+.+++.||+++++++|+++.. +.+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 145666777888889999999999999853 444
Q ss_pred EEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCC
Q 041537 277 TMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQ 315 (547)
Q Consensus 277 ~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~ 315 (547)
....+.+|+. +.||.||+|+|..+.... .++...++
T Consensus 254 ~gV~l~~G~~--i~Ad~VVlA~G~~s~~~~-~~l~~~Gi 289 (549)
T 3nlc_A 254 TGVTLSNGEE--IKSRHVVLAVGHSARDTF-EMLHERGV 289 (549)
T ss_dssp EEEEETTSCE--EECSCEEECCCTTCHHHH-HHHHHTTC
T ss_pred EEEEECCCCE--EECCEEEECCCCChhhHH-HHHHHcCC
Confidence 4333345765 999999999996544333 23445554
No 162
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.17 E-value=2.3e-06 Score=88.63 Aligned_cols=98 Identities=17% Similarity=0.281 Sum_probs=74.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ... ...+...+.+.+++.+ ++++ ..+++.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-----~~~-----~~~~~~~l~~~l~~~G--V~i~~~~~v~~ 210 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-----RVL-----GRRIGAWLRGLLTELG--VQVELGTGVVG 210 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-----HHH-----CHHHHHHHHHHHHHHT--CEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-----hhc-----CHHHHHHHHHHHHHCC--CEEEeCCEEEE
Confidence 57999999999999999999999999999999876321 100 1344556677778888 5544 568888
Q ss_pred EECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++.+++ .|.+.+ |+ ++++|.+|+|+|.+|+.
T Consensus 211 i~~~~~~~~v~~~d----g~---~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 211 FSGEGQLEQVMASD----GR---SFVADSALICVGAEPAD 243 (410)
T ss_dssp EECSSSCCEEEETT----SC---EEECSEEEECSCEEECC
T ss_pred EeccCcEEEEEECC----CC---EEEcCEEEEeeCCeecH
Confidence 887654 466655 54 89999999999998864
No 163
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.16 E-value=1.2e-05 Score=84.70 Aligned_cols=104 Identities=15% Similarity=0.286 Sum_probs=74.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce---EEEEecCCccCC--------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR---ITLIQSGDHILN-------------------------- 241 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~---V~lv~~~~~il~-------------------------- 241 (547)
++|+|||||++|+.+|..|.+... .+.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~-----------~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE-----------KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH-----------TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhh-----------cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchh
Confidence 389999999999999999987321 1567 999998764310
Q ss_pred -----------cc---------------cHHHHHHHHHHHHhCCcE--EEcCceEEEEe--CC----eEEEEeccCCeEE
Q 041537 242 -----------SF---------------DERISSFAEKKFQRDGIE--VLTECRVVNVS--DK----EITMKIKSTGAVC 287 (547)
Q Consensus 242 -----------~~---------------~~~~~~~~~~~l~~~GV~--v~~~~~V~~v~--~~----~v~~~~~~~G~~~ 287 (547)
.+ ...+.+++.+.+++.|++ ++++++|+.++ ++ .|++.+..+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 72 SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 00 145667778888888998 99999999995 33 3444442345444
Q ss_pred EEeeceEEEccCCCCCcc
Q 041537 288 SIPHGLVLWSTGVGTRPA 305 (547)
Q Consensus 288 ~i~~D~vv~a~G~~~~p~ 305 (547)
++.+|.||+|+|....|.
T Consensus 152 ~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEESEEEECCCSSSSBC
T ss_pred EEEcCEEEECCCCCCCCc
Confidence 589999999999544443
No 164
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.16 E-value=4.6e-06 Score=81.72 Aligned_cols=90 Identities=8% Similarity=0.050 Sum_probs=71.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
..++|+|||+|+.|+.+|..|.+.| +|+++++.+. .+...+.+.+++.+ ++++..+++.
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------------------~~~~~~~~~l~~~g--v~i~~~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------------------EPDADQHALLAARG--VRVETTRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------------------CCCHHHHHHHHHTT--CEEECSCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------------------CCCHHHHHHHHHCC--cEEEcceeee
Confidence 3579999999999999999999888 9999988754 12334566777888 5555678899
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++ .|.+.+ |+ ++++|.+|+|+|..|+.+
T Consensus 199 i~~~~-~v~~~~----g~---~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 199 IAGHA-DVVLAD----GR---SIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EETTE-EEEETT----SC---EEEESEEEECCEEECCCS
T ss_pred eecCC-eEEeCC----CC---EEEEEEEEEccCcccCch
Confidence 98755 677765 54 899999999999987653
No 165
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.15 E-value=4.8e-06 Score=86.32 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=74.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.-.. ....+...+.+.+++.|+++. ...+|+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV----------AGEALSEFYQAEHRAHGVDLR-TGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------cCHHHHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 6799999999999999999999999999999987643111 123455667778888884442 25678888
Q ss_pred ECCCC---EEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 108 DAAKN---EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 108 d~~~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
+.++. .|.+.+ |+ ++++|.+|+|+|..|+.
T Consensus 221 ~~~~~~v~~v~l~d----G~---~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQD----GS---VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EESSSBEEEEEESS----SC---EEECSEEEECSCCEESC
T ss_pred EecCCcEEEEEeCC----CC---EEEcCEEEECCCCccCh
Confidence 87654 355554 54 89999999999998864
No 166
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.14 E-value=1.8e-05 Score=80.83 Aligned_cols=92 Identities=16% Similarity=0.246 Sum_probs=72.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS---------------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------------------------- 242 (547)
.+|+|||||++|+.+|..|++. +.+|+++++.+.+.+.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN--------------GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 4899999999999999999875 6899999987654210
Q ss_pred ----------------c-----------cHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEE
Q 041537 243 ----------------F-----------DERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVL 295 (547)
Q Consensus 243 ----------------~-----------~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv 295 (547)
+ ...+.+.+.+.+++.||+++++++|++++.++ .+.. .+|++ +.+|.||
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~-~~g~~--~~ad~vV 153 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTL-QTGEV--LEADLIV 153 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEE-TTSCE--EECSEEE
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEE-CCCCE--EEcCEEE
Confidence 0 04456777888888999999999999997654 4433 34664 9999999
Q ss_pred EccCC
Q 041537 296 WSTGV 300 (547)
Q Consensus 296 ~a~G~ 300 (547)
.|+|.
T Consensus 154 ~AdG~ 158 (379)
T 3alj_A 154 GADGV 158 (379)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99994
No 167
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.14 E-value=4.9e-06 Score=89.40 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~ 61 (547)
.+++|||||||++|+++|..|++ .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 35799999999999999999998 999999999964
No 168
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.13 E-value=3.9e-06 Score=86.36 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=32.3
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
.||+|||||++||++|..|++.|++|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 48999999999999999999999999999997654
No 169
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.11 E-value=3e-06 Score=87.70 Aligned_cols=37 Identities=19% Similarity=0.340 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCe-EEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYD-VQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~-Vtlid~~~~~ 63 (547)
+.++|+|||||++||++|..|++.|++ |+|||+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 357999999999999999999999999 9999998653
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.11 E-value=4.4e-06 Score=87.62 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=72.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+... + . . ..++...+.+.+++.+ ++++ ..+++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~---~-----~-~~~~~~~l~~~l~~~G--v~i~~~~~v~~ 233 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL--P---S-----F-DPMISETLVEVMNAEG--PQLHTNAIPKA 233 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T---T-----S-CHHHHHHHHHHHHHHS--CEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh--h---h-----h-hHHHHHHHHHHHHHCC--CEEEeCCEEEE
Confidence 5799999999999999999999999999999986532 1 1 1 1234555677777777 4444 457888
Q ss_pred EECCC-C--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAK-N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~-~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.+. . .|.+.+ |+ ++++|.+|+|+|.+|+..
T Consensus 234 i~~~~~~~~~v~~~~----g~---~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 234 VVKNTDGSLTLELED----GR---SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EEECTTSCEEEEETT----SC---EEEESEEEECSCEEESCT
T ss_pred EEEeCCcEEEEEECC----Cc---EEEcCEEEECCCCCcCCC
Confidence 87653 2 455544 54 799999999999998764
No 171
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.11 E-value=1.2e-05 Score=83.20 Aligned_cols=96 Identities=18% Similarity=0.259 Sum_probs=74.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS---------------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------------------------- 242 (547)
..|+|||||++|+.+|..+++. +.+|+|+++.+.+...
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~--------------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~ 93 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKR--------------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHF 93 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHH
Confidence 3899999999999999999875 6899999988753100
Q ss_pred ------------------------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCC
Q 041537 243 ------------------------------------FDERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTG 284 (547)
Q Consensus 243 ------------------------------------~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G 284 (547)
-...+.+.+.+.+++.||+++++++|+++. ++.+.+.. .+|
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~-~~g 172 (417)
T 3v76_A 94 CKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTT-SAG 172 (417)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTE
T ss_pred HHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCc
Confidence 012566677788888999999999999984 45566554 334
Q ss_pred eEEEEeeceEEEccCCCCCc
Q 041537 285 AVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 285 ~~~~i~~D~vv~a~G~~~~p 304 (547)
++.+|.||.|+|..+.|
T Consensus 173 ---~i~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 173 ---TVDAASLVVASGGKSIP 189 (417)
T ss_dssp ---EEEESEEEECCCCSSCG
T ss_pred ---EEEeeEEEECCCCccCC
Confidence 39999999999976544
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.11 E-value=1.3e-05 Score=80.04 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=72.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---------------Ccc----cHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------NSF----DERISSFA 251 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~~----~~~~~~~~ 251 (547)
.+|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +.+ ...+.+++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMR--------------GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 4899999999999999999864 68999999986541 111 25677778
Q ss_pred HHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 252 EKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 252 ~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
.+.+++.+++++++++|..++. +.+.+.. .+|+. +.+|.||+|+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~ 119 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTT-SQGNA--YTAKAVIIAAGV 119 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCTT
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEE-CCCCE--EEeCEEEECCCC
Confidence 8888888999999999999864 3454543 34654 999999999996
No 173
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.10 E-value=9.1e-06 Score=89.10 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=33.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~~~ 63 (547)
...+|+|||||++||++|..|++ .|++|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 35789999999999999999999 99999999997653
No 174
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.10 E-value=6.8e-06 Score=85.85 Aligned_cols=97 Identities=21% Similarity=0.361 Sum_probs=76.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|||+++.+.+. + . ...++...+.+.+++.++++. ...+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll--~---~------~d~~~~~~~~~~l~~~gV~i~-~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN--K---L------MDADMNQPILDELDKREIPYR-LNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS--T---T------SCGGGGHHHHHHHHHTTCCEE-ESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc--c---c------ccchhHHHHHHHhhccceEEE-eccEEEEe
Confidence 5689999999999999999999999999999987532 1 1 123556677888888986664 46678888
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+. ..+.+++ |+ .+++|.+++|+|.+|+..
T Consensus 215 ~~--~~v~~~~----g~---~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 215 NG--NEITFKS----GK---VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ET--TEEEETT----SC---EEECSEEEECCCEEESCG
T ss_pred cC--CeeeecC----Ce---EEeeeeEEEEeceecCcH
Confidence 74 4677765 54 899999999999988653
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=8.4e-06 Score=86.14 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=74.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+||||++.+.+. +.+ ..++...+.+.+++.++++. ...+++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~~---------~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 250 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG--ASM---------DGEVAKATQKFLKKQGLDFK-LSTKVISA 250 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--SSS---------CHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc--ccc---------CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999987532 111 13445667777888884442 34688888
Q ss_pred EC--CCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DA--AKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~--~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+. +++. +.+.+..+ +. ..++++|.+|+|+|.+|+..
T Consensus 251 ~~~~~~~~~~v~~~~~~~-g~-~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTKT-NK-QENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEEETTT-TE-EEEEEESEEEECSCEEECCT
T ss_pred EEecCCCeEEEEEEEcCC-CC-ceEEECCEEEECCCCCcCCC
Confidence 86 5543 44431100 11 23799999999999998764
No 176
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.09 E-value=6.8e-06 Score=86.80 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=73.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. . ...++...+.+.+++.++++. ...+|+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 246 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-G---------IDMEISKNFQRILQKQGFKFK-LNTKVTGA 246 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-S---------CCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-c---------cCHHHHHHHHHHHHHCCCEEE-eCceEEEE
Confidence 579999999999999999999999999999998753210 0 112345567777888885442 35688899
Q ss_pred ECCCCE-EEEe--cC-CCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKNE-VFCK--SN-IDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~~-v~~~--~~-~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++.. +.+. +. .+++ .++++|.||+|+|.+|+..
T Consensus 247 ~~~~~~~~~v~~~~~~~~~~---~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 247 TKKSDGKIDVSIEAASGGKA---EVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EECTTSCEEEEEEETTSCCC---EEEEESEEEECSCEEECCT
T ss_pred EEcCCceEEEEEEecCCCCc---eEEEcCEEEECcCCCcCCC
Confidence 876532 3332 10 0012 3799999999999998764
No 177
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.08 E-value=5.5e-06 Score=85.03 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=68.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---CcccH---------HHHHHHHHHHHhC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---NSFDE---------RISSFAEKKFQRD 258 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---~~~~~---------~~~~~~~~~l~~~ 258 (547)
-+|+|||||+.|+.+|..|.. .+.+|+++++.+.+. |.++. ++.....+.+++.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~ 75 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKN 75 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHT
T ss_pred CCEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHC
Confidence 489999999999999999932 378999999988642 22221 1112244667789
Q ss_pred CcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 259 GIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 259 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
||+++++++|++++.+.-.+.. .+|+. +.+|.+|+|||.
T Consensus 76 ~i~~~~~~~V~~id~~~~~v~~-~~g~~--~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKLVTL-KSGEK--IKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTTEEEE-TTSCE--EECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEE-CCCCE--EECCEEEEecCC
Confidence 9999999999999865423332 34765 999999999995
No 178
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.08 E-value=6.2e-06 Score=85.17 Aligned_cols=98 Identities=22% Similarity=0.332 Sum_probs=73.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.-.. ....+...+.+.+++.+ ++++ ..+|+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------~~~~~~~~l~~~l~~~G--V~i~~~~~v~~ 209 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------VTPEISSYFHDRHSGAG--IRMHYGVRATE 209 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHTT--CEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------cCHHHHHHHHHHHHhCC--cEEEECCEEEE
Confidence 5789999999999999999999999999999987643111 12344566777888888 5544 457888
Q ss_pred EECCCCE---EEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDAAKNE---VFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~~~~~---v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++.++.. |.+.+ |+ ++++|.+|+|+|..|+.
T Consensus 210 i~~~~~~v~~V~~~d----G~---~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 210 IAAEGDRVTGVVLSD----GN---TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEEETTEEEEEEETT----SC---EEECSEEEECCCEEECC
T ss_pred EEecCCcEEEEEeCC----CC---EEEcCEEEECcCCccCH
Confidence 8765443 44544 54 89999999999998864
No 179
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.08 E-value=2.5e-05 Score=79.18 Aligned_cols=95 Identities=19% Similarity=0.335 Sum_probs=71.2
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc-eEEEEecCC------------cc-CCc---------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV-RITLIQSGD------------HI-LNS--------------- 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~------------~i-l~~--------------- 242 (547)
+|+|||||+.|+.+|..|.+. +. +|+++++.+ .+ .+.
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~--------------g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDF--------------GITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHc--------------CCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 799999999999999999874 56 899999875 00 000
Q ss_pred --------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCCCCc
Q 041537 243 --------------FDERISSFAEKKFQRDGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 243 --------------~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
....+..++.+.+++.|+++++++.|.+++.+ .+.+.. .+|+ +.+|.||+|+|..+.|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~---~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TTET---YHADYIFVATGDYNFP 145 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCC---EEEEEEEECCCSTTSB
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CCCE---EEeCEEEECCCCCCcc
Confidence 01345667777888899999999999998753 455544 2343 8999999999975544
No 180
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.08 E-value=1.5e-05 Score=78.89 Aligned_cols=93 Identities=18% Similarity=0.283 Sum_probs=71.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecC--Ccc--------CCcc----cHHHHHHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSG--DHI--------LNSF----DERISSFAEKKFQ 256 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~--~~i--------l~~~----~~~~~~~~~~~l~ 256 (547)
.+|+|||||+.|+.+|..|.+. +.+|+++++. ..+ .|.+ ..++.+++.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--------------MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHC--------------CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999875 6799999985 111 1222 3577888888889
Q ss_pred hCCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 257 RDGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 257 ~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+.|++++. +.|.+++.+ .+.+.. .+|+. +.+|.+|+|+|..
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKT-KRKGE--FKADSVILGIGVK 124 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEE-SSSCE--EEEEEEEECCCCE
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEE-CCCCE--EEcCEEEECcCCC
Confidence 99999999 899998654 444443 33554 9999999999964
No 181
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.07 E-value=8.9e-06 Score=86.75 Aligned_cols=37 Identities=24% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
...||||||||+|||++|..|++.|++|+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 182
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.07 E-value=1.8e-06 Score=90.04 Aligned_cols=95 Identities=25% Similarity=0.356 Sum_probs=67.5
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--Cccc---------HHHHHHHHHHHHhCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--NSFD---------ERISSFAEKKFQRDG 259 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--~~~~---------~~~~~~~~~~l~~~G 259 (547)
|+|||||||+.|+.+|..|+++. ++.+|+||++.+... |.+. +++.....+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 48999999999999999998763 358999999988642 2111 111111234566789
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.+ +|++|+.+.-++.. .+|++ +++|.+|+|+|..
T Consensus 71 v~~i~~-~v~~Id~~~~~V~~-~~g~~--i~YD~LViAtG~~ 108 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCE
T ss_pred cEEEEe-EEEEEECCCCEEEE-CCCCE--EECCEEEEeCCCC
Confidence 999876 69999865433322 34775 9999999999964
No 183
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.06 E-value=5.5e-06 Score=88.13 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++.||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 35799999999999999999999999999999965
No 184
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.06 E-value=3.1e-06 Score=91.75 Aligned_cols=37 Identities=30% Similarity=0.360 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC------CCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS------SYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~------g~~Vtlid~~~~~ 63 (547)
+.++|||||||+|||++|..|++. |++|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 347999999999999999999987 9999999998654
No 185
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.06 E-value=4e-06 Score=86.70 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=71.5
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--Cc---------ccHHHHHHHHHHHHhCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--NS---------FDERISSFAEKKFQRDG 259 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--~~---------~~~~~~~~~~~~l~~~G 259 (547)
++|+|||||+.|+++|..|.+... .+.+|+++++.+.+. |. ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 389999999999999999998321 268999999988542 11 11233344566777889
Q ss_pred cEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.+ +|++++.+ .+.+.+ .+++..++.+|.||+|+|..
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~-g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTK-PDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEEC-TTSCEEEEECSEEEECCCCE
T ss_pred eEEEEe-eEEEEeCCCCEEEEcc-CCcccceeeCCEEEECCCCC
Confidence 999988 89999765 566654 22333459999999999964
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.06 E-value=7.8e-06 Score=85.23 Aligned_cols=98 Identities=15% Similarity=0.300 Sum_probs=71.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+...-.. ...++...+.+.+++.| ++++ ..+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~G--V~i~~~~~v~~ 216 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV----------TAPPVSAFYEHLHREAG--VDIRTGTQVCG 216 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHHT--CEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------hhHHHHHHHHHHHHhCC--eEEEeCCEEEE
Confidence 5799999999999999999999999999999886532110 11234455667777778 4444 447888
Q ss_pred EEC--CC-C--EEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDA--AK-N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~--~~-~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++. ++ + .|.+.+ |. ++++|.+|+|+|.+|+.
T Consensus 217 i~~~~~~~~v~~v~~~~----G~---~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCED----GT---RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EEECTTTCCEEEEEETT----SC---EEECSEEEECCCEEECC
T ss_pred EEeccCCCcEEEEEeCC----CC---EEEcCEEEECCCCCcCc
Confidence 875 33 3 355544 44 89999999999998764
No 187
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.05 E-value=7.6e-06 Score=88.51 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=33.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFA 64 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~ 64 (547)
.++|+|||||++||++|..|++.|++|+|+|+.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG 162 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 5689999999999999999999999999999987543
No 188
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.05 E-value=2.8e-05 Score=78.69 Aligned_cols=94 Identities=22% Similarity=0.290 Sum_probs=73.4
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC---------------Ccc----cHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------NSF----DERISSFA 251 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~~----~~~~~~~~ 251 (547)
.+|+|||||+.|+.+|..|.+. +.+|+|+++.+.+. +.+ ...+.+++
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMN--------------NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 4899999999999999999864 68999999876431 111 25677788
Q ss_pred HHHHHhCCcEEEcCceEEEEeC--C-eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 252 EKKFQRDGIEVLTECRVVNVSD--K-EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 252 ~~~l~~~GV~v~~~~~V~~v~~--~-~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+.+++.|++++++++|+.++. + .+.+.. .+|+. +.+|.+|+|+|..
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~~--~~~~~li~AtG~~ 130 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRT-NTGNV--YRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEEEEEEECCTTC
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEE-CCCcE--EEeeEEEEccCCC
Confidence 8888889999999999999864 2 344443 34654 9999999999963
No 189
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.05 E-value=3.4e-05 Score=83.61 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=43.8
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe---CCe---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS---DKE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~---~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+..+...+.+.+++.||+|++++.|+++. ++. +.+.+..+|+...+.++.||+|+|-.
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 35677778888888999999999999984 233 34443345765569999999999963
No 190
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=1.2e-05 Score=85.43 Aligned_cols=99 Identities=18% Similarity=0.273 Sum_probs=73.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+||++.+... +. ...++...+.+.+++.++++. ...+++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~gv~i~-~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--RK---------FDESVINVLENDMKKNNINIV-TFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--cc---------cchhhHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 5799999999999999999999999999999987632 11 112345567777888884442 34578888
Q ss_pred ECCC-C--EEEEecCCCCCCceee-eecCEEEEccCCCccCC
Q 041537 108 DAAK-N--EVFCKSNIDKETRDFS-LEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~-~--~v~~~~~~~~g~~~~~-i~yD~LViAtG~~~~~~ 145 (547)
+.+. + .|.+.+ |+ + +++|.+|+|+|.+|+..
T Consensus 244 ~~~~~~~~~v~~~~----g~---~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 244 KKVSDKNLSIHLSD----GR---IYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EESSTTCEEEEETT----SC---EEEEESEEEECCCBCCTTT
T ss_pred EEcCCceEEEEECC----Cc---EEEECCEEEECCCCCcCCC
Confidence 7643 2 455543 44 5 99999999999998763
No 191
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.04 E-value=9.7e-06 Score=85.02 Aligned_cols=101 Identities=12% Similarity=0.293 Sum_probs=73.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-.. ...++...+.+.+++.++++. ...+|+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 217 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY----------FDKEFTDILAKDYEAHGVNLV-LGSKVAAF 217 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEE-ESSCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh----------hhhhHHHHHHHHHHHCCCEEE-cCCeeEEE
Confidence 5789999999999999999999999999999987532100 113445567777888884442 34578888
Q ss_pred ECCCCEEE-EecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKNEVF-CKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~~v~-~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++..+. +.. +|. ++++|.+|+|+|.+|+..
T Consensus 218 ~~~~~~v~~v~~---~g~---~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 218 EEVDDEIITKTL---DGK---EIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEETTEEEEEET---TSC---EEEESEEEECCCEEECCG
T ss_pred EcCCCeEEEEEe---CCC---EEECCEEEECcCCCCCHH
Confidence 76444443 222 144 899999999999998754
No 192
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.04 E-value=2.1e-06 Score=88.75 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=31.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~ 61 (547)
.++|+|||||++|+++|+.|++. |++|+|||++.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 37899999999999999999988 99999999864
No 193
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.03 E-value=6.5e-06 Score=88.09 Aligned_cols=101 Identities=16% Similarity=0.213 Sum_probs=74.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
.+++++|||||+.|+.+|..+++.|.+|||+++... ++. ...++...+...+++.++.+. ....+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~------L~~------~D~ei~~~l~~~l~~~gi~~~-~~~~v~~ 288 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV------LRG------FDQQCAVKVKLYMEEQGVMFK-NGILPKK 288 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCEEE-ETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc------ccc------cchhHHHHHHHHHHhhcceee-cceEEEE
Confidence 357999999999999999999999999999987532 111 123566677888888885442 3456777
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+......+.+.... +. ++.+|.|++|+|.+|+..
T Consensus 289 ~~~~~~~~~v~~~~--~~---~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 289 LTKMDDKILVEFSD--KT---SELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEETTEEEEEETT--SC---EEEESEEEECSCEEESCG
T ss_pred EEecCCeEEEEEcC--CC---eEEEEEEEEcccccCCcc
Confidence 77666666554321 33 788999999999998764
No 194
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.03 E-value=7.5e-06 Score=86.21 Aligned_cols=102 Identities=20% Similarity=0.218 Sum_probs=73.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ...++...+.+.+++.++++. ...+++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 238 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL--PN---------EDADVSKEIEKQFKKLGVTIL-TATKVESI 238 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCEEE-CSCEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHcCCEEE-eCcEEEEE
Confidence 5799999999999999999999999999999987532 11 112345556777777884442 34588888
Q ss_pred ECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++.. +.+.+ +|+ ..++++|.+|+|+|.+|+..
T Consensus 239 ~~~~~~~~v~~~~---~g~-~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 239 ADGGSQVTVTVTK---DGV-AQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp EECSSCEEEEEES---SSC-EEEEEESEEEECSCEEECCS
T ss_pred EEcCCeEEEEEEc---CCc-eEEEEcCEEEECCCCCccCC
Confidence 765543 34331 131 23799999999999998764
No 195
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.03 E-value=1.1e-05 Score=85.72 Aligned_cols=100 Identities=15% Similarity=0.324 Sum_probs=73.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-.. ...++...+.+.+++.++++. ...+++.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 261 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY----------YDRDLTDLMAKNMEEHGIQLA-FGETVKE 261 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHTTTCEEE-ETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH----------HHHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 46799999999999999999999999999999987532100 113445567777888884442 2457888
Q ss_pred EECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.+++ .+.+ + +. ++++|.+|+|+|.+|+..
T Consensus 262 i~~~~~v~~v~~-~----g~---~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 262 VAGNGKVEKIIT-D----KN---EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EECSSSCCEEEE-S----SC---EEECSEEEECCCEEECCG
T ss_pred EEcCCcEEEEEE-C----Cc---EEECCEEEECCCCCcChH
Confidence 886443 3444 2 43 899999999999998754
No 196
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.03 E-value=6.3e-06 Score=86.09 Aligned_cols=95 Identities=21% Similarity=0.344 Sum_probs=69.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc--CCc---------ccHHHHHHHHHHHHhCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI--LNS---------FDERISSFAEKKFQRDG 259 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i--l~~---------~~~~~~~~~~~~l~~~G 259 (547)
++|+|||||+.|+++|..|++... .+.+|+||++.+.+ .|. ...++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 489999999999999999998432 26899999999865 121 11233334567778899
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
|+++. .+|++++.+.-.+.. .+|+. +.+|.+|+|+|.
T Consensus 74 v~~~~-~~v~~id~~~~~V~~-~~g~~--i~~d~lviAtG~ 110 (437)
T 3sx6_A 74 IHFIA-QSAEQIDAEAQNITL-ADGNT--VHYDYLMIATGP 110 (437)
T ss_dssp CEEEC-SCEEEEETTTTEEEE-TTSCE--EECSEEEECCCC
T ss_pred CEEEE-eEEEEEEcCCCEEEE-CCCCE--EECCEEEECCCC
Confidence 99985 689999875423332 23654 999999999995
No 197
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.02 E-value=7.5e-06 Score=88.14 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=33.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
..+|+|||||++||++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999997653
No 198
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=6.3e-06 Score=86.90 Aligned_cols=105 Identities=15% Similarity=0.275 Sum_probs=75.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
..++|+|||||+.|+.+|..|++.|.+|+||++.+.+. |. ...++...+.+.+++.++++. ...++..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV--PT---------MDAEIRKQFQRSLEKQGMKFK-LKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHSSCCEE-CSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--cc---------ccHHHHHHHHHHHHHcCCEEE-eCCEEEE
Confidence 35799999999999999999998999999999987532 11 113445567777888885553 3568999
Q ss_pred EECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++. .+.+.+.. +|+ ..++++|.+|+|+|.+|+..
T Consensus 244 i~~~~~~~~v~~~~~~-~g~-~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSA-GGE-QTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp EECSSSSEEEEEEESS-SCC-CEEEEESEEECCCCEEECCT
T ss_pred EEEcCCeEEEEEEecC-CCc-ceEEECCEEEECCCCCcCCC
Confidence 987654 34443210 021 13799999999999998764
No 199
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=6.9e-06 Score=83.73 Aligned_cols=92 Identities=17% Similarity=0.416 Sum_probs=71.0
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEEEE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAIKI 107 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i 107 (547)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. + ...++...+.+.+++.+ ++++. .+++.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~----------~~~~~~~~l~~~l~~~g--V~i~~~~~v~~i 209 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--G----------LDEELSNMIKDMLEETG--VKFFLNSELLEA 209 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT--T----------CCHHHHHHHHHHHHHTT--EEEECSCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec--c----------CCHHHHHHHHHHHHHCC--CEEEcCCEEEEE
Confidence 789999999999999999999999999999987532 1 11344566777788888 65554 478888
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
+ ...|.+++ | ++++|.+|+|+|..|+.
T Consensus 210 ~--~~~v~~~~----g----~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 210 N--EEGVLTNS----G----FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp C--SSEEEETT----E----EEECSCEEEECCEEECC
T ss_pred E--eeEEEECC----C----EEEcCEEEECcCCCcCH
Confidence 7 34677653 3 39999999999998764
No 200
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.01 E-value=6.2e-06 Score=84.99 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=67.2
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--Cc--------ccHHHHHHHHHHHHhCC
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--NS--------FDERISSFAEKKFQRDG 259 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--~~--------~~~~~~~~~~~~l~~~G 259 (547)
+|+|||||||+.|+.+|..|++.. ++.+|+||++.+... |. .+.+....-.+.+.+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 579999999999999999998763 357999999987532 11 11111111124566789
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.+ +|+.|+.+.-.+.. .+|++ +.+|.+|+|+|..
T Consensus 70 v~~i~~-~v~~id~~~~~v~~-~~g~~--i~yd~LviAtG~~ 107 (401)
T 3vrd_B 70 IQVVHD-SALGIDPDKKLVKT-AGGAE--FAYDRCVVAPGID 107 (401)
T ss_dssp CEEECS-CEEEEETTTTEEEE-TTSCE--EECSEEEECCCEE
T ss_pred CEEEEe-EEEEEEccCcEEEe-cccce--eecceeeeccCCc
Confidence 999866 68999875433332 34765 9999999999953
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.00 E-value=2.2e-05 Score=77.92 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=72.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+...+.+.+++.+ ++++ ..+++
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~g--v~i~~~~~v~ 208 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGN--IILHTNRTLE 208 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSS--EEEECSCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCC--eEEEcCceeE
Confidence 357899999999999999999999999999999875421 1222334555566677 6655 45888
Q ss_pred EEECCC-C--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 106 KIDAAK-N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 106 ~id~~~-~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
.++.+. + .|.+.+..+.| +..++++|.+|+|+|.+|+..
T Consensus 209 ~i~~~~~~v~~v~~~~~~~~g-~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 209 EVTGDQMGVTGVRLRDTQNSD-NIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEEECSSSEEEEEEECCTTCC-CCEEEECSEEEECSCEEESCG
T ss_pred EEEcCCCceEEEEEEeccCCC-ceEEEEcCEEEEEeCCCCChH
Confidence 888765 2 25665411001 124899999999999988653
No 202
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.00 E-value=2.3e-05 Score=82.17 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.-.. ...++...+.+.+++.+ ++++. .+|+
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~d~~~~~~l~~~l~~~G--V~i~~~~~v~ 213 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------FDKEMVAEVQKSLEKQA--VIFHFEETVL 213 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------CCHHHHHHHHHHHHTTT--EEEEETCCEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------CCHHHHHHHHHHHHHcC--CEEEeCCEEE
Confidence 35789999999999999999999999999999987643110 11345566777888888 65554 5788
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGT 147 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~i 147 (547)
.++..+..+.+... +. ++++|.+|+|+|.+|+....
T Consensus 214 ~i~~~~~~v~v~~~---~g---~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 214 GIEETANGIVLETS---EQ---EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEEECSSCEEEEES---SC---EEEESEEEECSCCBCCCSSC
T ss_pred EEEccCCeEEEEEC---CC---EEEeCEEEECcCCCCChHHH
Confidence 88854444433321 22 79999999999999876533
No 203
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.00 E-value=3.9e-05 Score=75.64 Aligned_cols=91 Identities=18% Similarity=0.214 Sum_probs=69.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEE-EecCCcc------------CCccc-----HHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITL-IQSGDHI------------LNSFD-----ERISSFAE 252 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~l-v~~~~~i------------l~~~~-----~~~~~~~~ 252 (547)
.+|+|||||+.|+.+|..|.+. +.+|++ +++. .+ .|.++ .++..++.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG--------------GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--------------TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHH
Confidence 4899999999999999999986 678999 9973 21 12333 57888888
Q ss_pred HHHHhCCcEEEcCceEEEE-eC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 253 KKFQRDGIEVLTECRVVNV-SD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 253 ~~l~~~GV~v~~~~~V~~v-~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+.+++.|++++.+ .|.++ ++ +.+.+....++ ++.+|.+|+|+|.
T Consensus 70 ~~~~~~~v~~~~~-~v~~i~~~~~~~~~v~~~~~~---~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQILKNSDGSFTIKLEGGK---TELAKAVIVCTGS 116 (315)
T ss_dssp HHHTTTCCEEECC-CEEEEEECTTSCEEEEETTSC---EEEEEEEEECCCE
T ss_pred HHHHHcCcEEEEE-EEEEEecCCCCcEEEEEecCC---EEEeCEEEEeeCC
Confidence 9999999999998 78888 44 44553121223 4999999999996
No 204
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.99 E-value=1.7e-05 Score=84.85 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCC------------CCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV------------SSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~------------~g~~Vtlid~~~ 61 (547)
..++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35799999999999999999998 899999999864
No 205
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.99 E-value=1.2e-05 Score=87.42 Aligned_cols=97 Identities=21% Similarity=0.330 Sum_probs=76.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.+ ++++ ..+|+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~G--V~i~~~~~v~~ 253 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP--P---------IDYEMAAYVHEHMKNHD--VELVFEDGVDA 253 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--T---------SCHHHHHHHHHHHHHTT--CEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc--c---------CCHHHHHHHHHHHHHcC--CEEEECCeEEE
Confidence 57999999999999999999999999999998875321 1 11344566777788888 4444 468889
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++.+...|.+.+ |+ ++++|.+|+|+|..|+.
T Consensus 254 i~~~~~~v~~~~----g~---~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 254 LEENGAVVRLKS----GS---VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEGGGTEEEETT----SC---EEECSEEEECSCEEECC
T ss_pred EecCCCEEEECC----CC---EEEcCEEEEccCCCCCh
Confidence 987667788765 54 89999999999998865
No 206
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.99 E-value=1.4e-05 Score=84.70 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=75.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++...+.+.+++.++++. ...+++.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~gV~v~-~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG--G---------MDGEVAKQLQRMLTKQGIDFK-LGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS--S---------SCHHHHHHHHHHHHHTTCEEE-CSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc--c---------CCHHHHHHHHHHHHhCCCEEE-ECCeEEE
Confidence 357899999999999999999999999999998876431 0 113455667777888884442 3457888
Q ss_pred EECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 107 IDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 107 id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
++.++.. +.+.+.. .| +..++++|.+|+|+|.+|+...
T Consensus 265 i~~~~~~~~v~~~~~~-~g-~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVK-GG-EATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEETTEEEEEEEETT-SC-CCEEEEESEEEECCCCEECCTT
T ss_pred EEEeCCEEEEEEEecC-CC-ceEEEEcCEEEEeeCCccCCCc
Confidence 8766554 4444311 02 1248999999999999887643
No 207
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.99 E-value=1.1e-05 Score=84.80 Aligned_cols=99 Identities=21% Similarity=0.293 Sum_probs=72.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+... + . . ..++...+.+.+++.+ ++++ ..+++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l--~---~-----~-~~~~~~~l~~~l~~~g--v~i~~~~~v~~ 232 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL--F---Q-----F-DPLLSATLAENMHAQG--IETHLEFAVAA 232 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T---T-----S-CHHHHHHHHHHHHHTT--CEEESSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc--c---c-----c-CHHHHHHHHHHHHHCC--CEEEeCCEEEE
Confidence 5799999999999999999999999999999986532 1 1 1 1234455677778888 4444 457888
Q ss_pred EECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++. .|.+.+ |+ . ++++|.||+|+|.+|+..
T Consensus 233 i~~~~~~~~v~~~~----G~-~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 233 LERDAQGTTLVAQD----GT-R-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEEETTEEEEEETT----CC-E-EEEESEEEECSCEEESCT
T ss_pred EEEeCCeEEEEEeC----Cc-E-EEEcCEEEECCCCCcCCC
Confidence 876543 344433 32 1 699999999999998764
No 208
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.99 E-value=0.00013 Score=78.65 Aligned_cols=64 Identities=22% Similarity=0.281 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCe---EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH
Q 041537 244 DERISSFAEKKFQRDGIEVLTECRVVNVS--DKE---ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME 311 (547)
Q Consensus 244 ~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~ 311 (547)
+..+...+.+.+++.|++++++++|+++. ++. |.+.+..+|+..++.+|.||.|+| ++...+..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG----~ws~~l~~ 255 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSG----PWVDKVRN 255 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCG----GGHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCC----hhHHHHHH
Confidence 45677777788889999999999999985 344 344432245534599999999999 55545543
No 209
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.98 E-value=1.3e-05 Score=84.89 Aligned_cols=98 Identities=15% Similarity=0.265 Sum_probs=73.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCC---CCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS---SYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AE 103 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~---g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 103 (547)
.++|+|||||+.|+.+|..|++. |.+|+||++.+... |. ...++...+.+.+++.+ ++++. .+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~G--V~i~~~~~ 253 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL--RG---------FDSELRKQLTEQLRANG--INVRTHEN 253 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTT--EEEEETCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc--cc---------cCHHHHHHHHHHHHhCC--CEEEeCCE
Confidence 57999999999999999999877 99999999987532 11 11244566777788888 55544 47
Q ss_pred EEEEECCC-C--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 104 AIKIDAAK-N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 104 v~~id~~~-~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
|+.++.++ + .|.+.+ |+ ++++|.||+|+|.+|+..
T Consensus 254 v~~i~~~~~~~~~v~~~~----G~---~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 254 PAKVTKNADGTRHVVFES----GA---EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEEEECTTSCEEEEETT----SC---EEEESEEEECSCEEESCT
T ss_pred EEEEEEcCCCEEEEEECC----Cc---EEEcCEEEEccCCCcCcc
Confidence 88887653 2 455543 54 799999999999998764
No 210
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.98 E-value=6.5e-06 Score=87.77 Aligned_cols=34 Identities=32% Similarity=0.403 Sum_probs=30.6
Q ss_pred CCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~ 61 (547)
.++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4699999999999999999998 999999999864
No 211
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.97 E-value=8.9e-06 Score=86.04 Aligned_cols=100 Identities=14% Similarity=0.245 Sum_probs=72.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~ 105 (547)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . ...++...+.+.+++.+ ++++ ..+++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~G--v~i~~~~~v~ 251 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--I---------YDGDMAEYIYKEADKHH--IEILTNENVK 251 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--S---------SCHHHHHHHHHHHHHTT--CEEECSCCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--c---------CCHHHHHHHHHHHHHcC--cEEEcCCEEE
Confidence 468999999999999999999999999999999865321 0 11344556777788888 4444 45788
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
.++.+++...+... +. ++++|.||+|+|..|+..
T Consensus 252 ~i~~~~~v~~v~~~---~~---~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 252 AFKGNERVEAVETD---KG---TYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEEESSBEEEEEET---TE---EEECSEEEECSCEEESCG
T ss_pred EEEcCCcEEEEEEC---CC---EEEcCEEEECcCCCcChH
Confidence 88766443122210 22 799999999999988654
No 212
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.97 E-value=9.4e-06 Score=85.16 Aligned_cols=90 Identities=20% Similarity=0.264 Sum_probs=70.6
Q ss_pred hccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc-------CCc--ccHHHHHHHHHHHHhC
Q 041537 188 KRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI-------LNS--FDERISSFAEKKFQRD 258 (547)
Q Consensus 188 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i-------l~~--~~~~~~~~~~~~l~~~ 258 (547)
...++|+|||||+.|+.+|..|++. +.+|+++++.+.+ +|. ++..+.+...+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~--------------G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK--------------GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 3567999999999999999999986 6799999998875 343 3667778888899999
Q ss_pred CcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 259 GIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 259 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
||++++++.|. ..+.+.+ +. +.+|.||+|+|..
T Consensus 186 gv~~~~~~~v~----~~v~~~~---~~---~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 186 GVIYHPNFEVG----RDASLPE---LR---RKHVAVLVATGVY 218 (456)
T ss_dssp TCEEETTCCBT----TTBCHHH---HH---SSCSEEEECCCCC
T ss_pred CcEEEeCCEec----cEEEhhH---hH---hhCCEEEEecCCC
Confidence 99999998762 2222221 22 6799999999964
No 213
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.97 E-value=1.2e-05 Score=84.72 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=73.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHH-HhCCCcEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNII-KKRNAEIQFW-EAEA 104 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~-~~~~~~v~~~-~~~v 104 (547)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ...++...+.+.+ ++.+ ++++ ..+|
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~~g--v~i~~~~~v 239 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA--PT---------LDEDVTNALVGALAKNEK--MKFMTSTKV 239 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTC--CEEECSCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc--cc---------CCHHHHHHHHHHHhhcCC--cEEEeCCEE
Confidence 35799999999999999999999999999999987632 11 1133455677777 8888 4444 4588
Q ss_pred EEEECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 105 IKIDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 105 ~~id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++.++. .+.+.+.. |+ ..++++|.+|+|+|.+|+..
T Consensus 240 ~~i~~~~~~~~v~~~~~~--g~-~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKN--GK-RETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEEECSSSEEEEEECC------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCeEEEEEEcCC--Cc-eEEEECCEEEECCCcccCCC
Confidence 88887553 34443101 31 23799999999999998764
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.96 E-value=1.2e-05 Score=85.28 Aligned_cols=99 Identities=20% Similarity=0.271 Sum_probs=73.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCC---CCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS---SYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEA 104 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~---g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 104 (547)
.++|+|||||+.|+.+|..|++. |.+|+||++.+... +. ...++...+.+.+++.++++. ...+|
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~-~~~~v 258 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--RG---------FDETIREEVTKQLTANGIEIM-TNENP 258 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEE-ESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHhCCCEEE-eCCEE
Confidence 57999999999999999999877 99999999987532 11 112345567777888884442 34578
Q ss_pred EEEECCC-C--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 105 IKIDAAK-N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 105 ~~id~~~-~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++.+. + .|.+.+ |+ ++++|.+|+|+|.+|+..
T Consensus 259 ~~i~~~~~~~~~v~~~~----G~---~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 259 AKVSLNTDGSKHVTFES----GK---TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEEECTTSCEEEEETT----SC---EEEESEEEECSCEEECCG
T ss_pred EEEEEcCCceEEEEECC----Cc---EEEcCEEEECCCCccccc
Confidence 8887653 2 455543 54 899999999999988753
No 215
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.96 E-value=9.9e-06 Score=85.73 Aligned_cols=102 Identities=13% Similarity=0.182 Sum_probs=73.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+. |. ...++...+.+.+++.+ ++++. .++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~g--V~i~~~~~v~~ 251 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM--QG---------ADRDLVKVWQKQNEYRF--DNIMVNTKTVA 251 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHGGGE--EEEECSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--cc---------cCHHHHHHHHHHHHhcC--CEEEECCEEEE
Confidence 5799999999999999999999999999999987632 11 11344556677777777 65554 58888
Q ss_pred EECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++.. |.+.+....|+ ++++|.+|+|+|.+|+..
T Consensus 252 i~~~~~~~~v~~~~~~~~g~---~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKE---PQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEETTEEEEEEESSSCCSS---CEEESCEEECCCEEECGG
T ss_pred EEEcCCeEEEEEeccCCCce---EEEcCEEEECcCCCcCCC
Confidence 8765543 44442110122 688999999999998763
No 216
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=2.4e-05 Score=81.92 Aligned_cols=96 Identities=16% Similarity=0.369 Sum_probs=68.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC------Ccc------cHHHHHHHHHHH-Hh
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL------NSF------DERISSFAEKKF-QR 257 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------~~~------~~~~~~~~~~~l-~~ 257 (547)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.+. |.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998863 367999999988541 111 111222222334 67
Q ss_pred CCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 258 DGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
.||+++++++|+.++.+...+.. .+|+ .++.+|.+|+|||.
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~-~~g~-~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRE-NGGE-KSYEWDYLVFANGA 112 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEEC-SSSE-EEEECSEEEECCCE
T ss_pred cCcEEEecCEEEEEecCCCEEEE-CCce-EEEEcCEEEECCCC
Confidence 89999999999999887766654 3342 24999999999995
No 217
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.96 E-value=4.3e-05 Score=75.38 Aligned_cols=93 Identities=19% Similarity=0.262 Sum_probs=70.3
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC--ccC--------Cc----ccHHHHHHHHHHHHh
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD--HIL--------NS----FDERISSFAEKKFQR 257 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~il--------~~----~~~~~~~~~~~~l~~ 257 (547)
.|+|||+|+.|+.+|..|.+. +.+|++++... ... +. ..+.+.+++.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARK--------------GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999864 67999997531 110 11 124677888888899
Q ss_pred CCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 258 DGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.|++++.+++|+.++.+ ...+.. .+|+. +.+|.+|+|+|..
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIET-ASGAV--LKARSIIVATGAK 114 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEE-TTSCE--EEEEEEEECCCEE
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEE-CCCCE--EEeCEEEECcCCC
Confidence 99999999999999643 344433 34654 9999999999963
No 218
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.96 E-value=5.4e-05 Score=78.02 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=73.0
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-----------------c------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-----------------S------------ 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-----------------~------------ 242 (547)
.|+|||||+.|+.+|..+++. +.+|+++++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~--------------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKL--------------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhC--------------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 799999999999999999875 678999998764310 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEe-C-----CeEEEEec
Q 041537 243 -----------------------------------FDERISSFAEKKFQRDGIEVLTECRVVNVS-D-----KEITMKIK 281 (547)
Q Consensus 243 -----------------------------------~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~-~-----~~v~~~~~ 281 (547)
....+.+.+.+.+++.||+++++++|+++. . +.+.+..
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~- 150 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV- 150 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE-
Confidence 123455677788888999999999999986 3 4455554
Q ss_pred cCCeEEEEeeceEEEccCCCCCcc
Q 041537 282 STGAVCSIPHGLVLWSTGVGTRPA 305 (547)
Q Consensus 282 ~~G~~~~i~~D~vv~a~G~~~~p~ 305 (547)
.+| ++.+|.||.|+|..+.|.
T Consensus 151 ~~g---~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 151 NST---QWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp TTE---EEEESEEEECCCCSSCGG
T ss_pred CCC---EEECCEEEECCCCccCCC
Confidence 233 399999999999766553
No 219
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=1.1e-05 Score=85.23 Aligned_cols=100 Identities=15% Similarity=0.241 Sum_probs=72.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIK 106 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 106 (547)
..++|+|||||+.|+.+|..|++.|.+|++|++.+... + . ...++...+.+.+++.|+++. ...+|+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~---~------~d~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL--R---K------FDECIQNTITDHYVKEGINVH-KLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC--T---T------SCHHHHHHHHHHHHHHTCEEE-CSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc--c---c------cCHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 35799999999999999999999999999999987532 1 1 112345566777777784442 3457888
Q ss_pred EECCC-C---EEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 107 IDAAK-N---EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 107 id~~~-~---~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
++.+. . .|.+.+ |+ .++++|.+|+|+|.+|+.
T Consensus 252 i~~~~~~~~~~v~~~~----G~--~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 252 VEKNVETDKLKIHMND----SK--SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEECC-CCCEEEEETT----SC--EEEEESEEEECSCEEECC
T ss_pred EEEcCCCcEEEEEECC----Cc--EEEEcCEEEECCCCCCcc
Confidence 87642 2 455543 41 289999999999999876
No 220
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.94 E-value=1.9e-05 Score=85.04 Aligned_cols=35 Identities=17% Similarity=0.344 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCC---CCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV---SSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~---~g~~Vtlid~~~ 61 (547)
..++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35799999999999999999998 999999999864
No 221
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.93 E-value=3.2e-06 Score=89.94 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=37.9
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCCCCccCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~~~~~~p 67 (547)
.+.+..||||||||++||+||++|++ .|++|+|+|++++.++..
T Consensus 6 ~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 6 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 33456799999999999999999986 699999999999987743
No 222
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.93 E-value=4.5e-05 Score=76.11 Aligned_cols=98 Identities=13% Similarity=0.161 Sum_probs=70.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhH-HHHHHhCCCcEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPV-RNIIKKRNAEIQFW-EAEA 104 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~v~~~-~~~v 104 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+ ++++++.+ ++++ ..++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~g--v~i~~~~~v 218 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------------SKIMQQRALSNPK--IDVIWNSSV 218 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHTCTT--EEEECSEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------cHHHHHHHHhCCC--eeEecCCce
Confidence 357999999999999999999999999999999875421 1122 24445566 6655 5688
Q ss_pred EEEECCC---C--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 105 IKIDAAK---N--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 105 ~~id~~~---~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.++.+. + .|.+.+.. +|+ ..++++|.+|+|+|.+|+..
T Consensus 219 ~~i~~~~~~~~v~~v~~~~~~-~g~-~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 219 VEAYGDGERDVLGGLKVKNVV-TGD-VSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEEESSSSSSEEEEEEEETT-TCC-EEEEECSEEEECSCEEESCG
T ss_pred EEEeCCCCccceeeEEEEecC-CCc-eEEEecCEEEEEeCCccchH
Confidence 8888765 3 36665321 122 24899999999999988754
No 223
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.93 E-value=1.5e-05 Score=84.05 Aligned_cols=98 Identities=18% Similarity=0.355 Sum_probs=73.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCC-CCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS-SYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAI 105 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~-g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 105 (547)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+.-.. ....+...+.+.+++.+ ++++. .+|+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~G--V~i~~~~~v~ 226 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF----------TSKSLSQMLRHDLEKND--VVVHTGEKVV 226 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------SCHHHHHHHHHHHHHTT--CEEECSCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------cCHHHHHHHHHHHHhcC--CEEEeCCEEE
Confidence 57999999999999999999988 99999999987532101 11345566777788888 55544 4788
Q ss_pred EEECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 106 KIDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 106 ~id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
.++.++.. +.+.+ |+ ++++|.+|+|+|.+|+.
T Consensus 227 ~i~~~~~~v~v~~~~----g~---~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 227 RLEGENGKVARVITD----KR---TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEEESSSBEEEEEES----SC---EEECSEEEECSCEEECC
T ss_pred EEEccCCeEEEEEeC----CC---EEEcCEEEECCCCCcCH
Confidence 88875544 44443 44 89999999999998864
No 224
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.93 E-value=1.5e-05 Score=84.67 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +.. ..++...+.+.+++. +++. ...+++.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~~---------d~~~~~~l~~~l~~~-V~i~-~~~~v~~i 240 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA--NLQ---------DEEMKRYAEKTFNEE-FYFD-AKARVIST 240 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--TCC---------CHHHHHHHHHHHHTT-SEEE-TTCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--ccC---------CHHHHHHHHHHHhhC-cEEE-ECCEEEEE
Confidence 5799999999999999999999999999999987643 111 123445556666654 4443 35678888
Q ss_pred ECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 108 DAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 108 d~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
+.++..+.+.....+|+ +.++++|.+|+|+|.+|+...
T Consensus 241 ~~~~~~v~v~~~~~~G~-~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 241 IEKEDAVEVIYFDKSGQ-KTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EECSSSEEEEEECTTCC-EEEEEESEEEECSCCEESCSS
T ss_pred EEcCCEEEEEEEeCCCc-eEEEECCEEEEeeCCccCCCC
Confidence 76554443321100132 248999999999999987654
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.93 E-value=1.2e-05 Score=84.63 Aligned_cols=98 Identities=18% Similarity=0.293 Sum_probs=73.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|++|++.+.+. | . ..++...+.+.+++.| ++++ ..+|+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~-~---------~~~~~~~l~~~l~~~G--v~i~~~~~v~~ 241 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--R-E---------DPAIGEAVTAAFRAEG--IEVLEHTQASQ 241 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--T-S---------CHHHHHHHHHHHHHTT--CEEETTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--C-C---------CHHHHHHHHHHHHhCC--CEEEcCCEEEE
Confidence 5799999999999999999999999999999987532 1 1 1345566777788888 4444 457888
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++..+.+... +. ++++|.+|+|+|.+|+..
T Consensus 242 i~~~~~~~~v~~~---~~---~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 242 VAHMDGEFVLTTT---HG---ELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEEETTEEEEEET---TE---EEEESEEEECSCEEESCT
T ss_pred EEEeCCEEEEEEC---Cc---EEEcCEEEECCCCCcCCC
Confidence 8766554433321 22 799999999999998753
No 226
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.92 E-value=7.8e-05 Score=73.58 Aligned_cols=91 Identities=21% Similarity=0.218 Sum_probs=69.2
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc-eEEEEecCCc-----------cCCcc-----cHHHHHHHHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV-RITLIQSGDH-----------ILNSF-----DERISSFAEKK 254 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~-----------il~~~-----~~~~~~~~~~~ 254 (547)
+|+|||||+.|+.+|..|.+. +. +|+++++... ..|.+ ...+.+++.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRG--------------GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHC--------------CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 799999999999999999874 67 9999998531 01222 25677788888
Q ss_pred HHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 255 FQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 255 l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+++.|++++. ++|..++ ++.+.+.. .+|+. +.+|.+|+|+|.
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~ 112 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILA-EDGKT--FEAKSVIIATGG 112 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCCE
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEE-cCCCE--EECCEEEECCCC
Confidence 8899999998 7888875 34444433 34654 999999999995
No 227
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.92 E-value=6.3e-05 Score=74.65 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=69.2
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-----------cCCcc----cHHHHHHHHHH
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-----------ILNSF----DERISSFAEKK 254 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-----------il~~~----~~~~~~~~~~~ 254 (547)
..+|+|||||+.|+.+|..|++. +.+|+++++... -.|.+ ...+.+.+.+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS--------------GFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHH
Confidence 35899999999999999999875 679999998521 01221 24667778888
Q ss_pred HHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 255 FQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 255 l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+++.|++++. .+|..++ ++.+.+.. +++. +.+|.+|+|+|.
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~--~~~~--~~~~~li~AtG~ 124 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET--NDDT--YHAKYVIITTGT 124 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE--SSSE--EEEEEEEECCCE
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE--CCCE--EEeCEEEECCCC
Confidence 8889999998 6788885 44444443 3544 999999999995
No 228
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.92 E-value=3.1e-05 Score=81.70 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=75.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.+ ++++ ..+++
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~G--v~v~~~~~v~ 245 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL--PA---------VDEQVAKEAQKILTKQG--LKILLGARVT 245 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTT--EEEEETCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC--cc---------cCHHHHHHHHHHHHhCC--CEEEECCEEE
Confidence 35789999999999999999999999999999987542 11 11345566777788888 5554 45888
Q ss_pred EEECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 106 KIDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 106 ~id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
.++.++.. +.+.+ +.+..++++|.+|+|+|.+|+..
T Consensus 246 ~i~~~~~~~~v~~~~----~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 246 GTEVKNKQVTVKFVD----AEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEEECSSCEEEEEES----SSEEEEEEESEEEECSCEEECCT
T ss_pred EEEEcCCEEEEEEEe----CCCcEEEECCEEEEeeCCcccCC
Confidence 88866543 44443 21124899999999999998764
No 229
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.92 E-value=5.4e-05 Score=75.35 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=69.2
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-----------cCCcc-----cHHHHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-----------ILNSF-----DERISSFAEKK 254 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-----------il~~~-----~~~~~~~~~~~ 254 (547)
.+|+|||||+.|+.+|..|.+. +.+|+++++... -.|.+ ...+.+++.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRA--------------QLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQ 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHc--------------CCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHH
Confidence 4899999999999999999875 679999998721 01222 24677788888
Q ss_pred HHhCCcEEEcCceEEEEeCC---e--EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 255 FQRDGIEVLTECRVVNVSDK---E--ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 255 l~~~GV~v~~~~~V~~v~~~---~--v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+++.|++++. .+|.+++.+ . +.+.. .+|+. +.+|.+|+|+|..
T Consensus 75 ~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 75 AEKFGAKVEM-DEVQGVQHDATSHPYPFTVR-GYNGE--YRAKAVILATGAD 122 (325)
T ss_dssp HHHTTCEEEE-CCEEEEEECTTSSSCCEEEE-ESSCE--EEEEEEEECCCEE
T ss_pred HHHcCCEEEe-eeEEEEEeccCCCceEEEEE-CCCCE--EEeCEEEECcCCC
Confidence 8999999998 578888543 2 33322 23654 9999999999963
No 230
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.89 E-value=8.2e-05 Score=74.43 Aligned_cols=100 Identities=12% Similarity=0.186 Sum_probs=71.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhH-HHHHHhCCCcEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPV-RNIIKKRNAEIQFW-EAEA 104 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~v~~~-~~~v 104 (547)
..++|+|||+|+.|+.+|..|++.+.+|+++++.+.+... ..+ ..++++.+ ++++ ..++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~-----------------~~~~~~~~~~~g--V~v~~~~~v 214 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS-----------------KIMLDRARNNDK--IRFLTNHTV 214 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC-----------------TTHHHHHHHCTT--EEEECSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc-----------------HHHHHHHhccCC--cEEEeCcee
Confidence 3579999999999999999999999999999988754210 112 24445566 6655 5688
Q ss_pred EEEECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCCCC
Q 041537 105 IKIDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGT 147 (547)
Q Consensus 105 ~~id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~i 147 (547)
+.++.+.+ .|.+.+.. +|+ ..++++|.+|+|+|.+|+..-.
T Consensus 215 ~~i~~~~~~~~v~~~~~~-~g~-~~~i~~D~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 215 VAVDGDTTVTGLRVRDTN-TGA-ETTLPVTGVFVAIGHEPRSGLV 257 (335)
T ss_dssp EEEECSSSCCEEEEEEET-TSC-CEEECCSCEEECSCEEECCTTT
T ss_pred EEEecCCcEeEEEEEEcC-CCc-eEEeecCEEEEccCCccChhHh
Confidence 89987653 46665311 021 2479999999999999875433
No 231
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.89 E-value=3e-05 Score=81.13 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=66.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCe-EEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYD-VQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~-Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.+.+ |+|+++.+.+ +...+ ++ ....|+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~--------------------------l~~~~--i~-~~~~v~ 261 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD--------------------------IQNES--LQ-QVPEIT 261 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------CBCSS--EE-EECCEE
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------CCCCC--eE-EecCeE
Confidence 457899999999999999999999999 9999998654 11123 54 356778
Q ss_pred EEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 106 KIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
.+..+...|.+.+ |+ ..+.+|.+|+|||..|+.+-
T Consensus 262 ~~~~~~~~v~~~d----G~--~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 262 KFDPTTREIYLKG----GK--VLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEETTTTEEEETT----TE--EECCCSEEEECCCBCCCCCC
T ss_pred EEecCCCEEEECC----CC--EeccCCEEEECCCCCcCCCC
Confidence 8876667888875 53 24799999999999988654
No 232
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.89 E-value=2.9e-05 Score=83.78 Aligned_cols=98 Identities=20% Similarity=0.247 Sum_probs=71.1
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC------Cc-----c---cHHHHHHHHHHHH
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL------NS-----F---DERISSFAEKKFQ 256 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------~~-----~---~~~~~~~~~~~l~ 256 (547)
++|+|||||+.|+.+|..|.+.. ++.+|+++++.+.+. |. + ...+........+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS------------ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHH
Confidence 38999999999999999998762 368999999998642 10 0 0011122333445
Q ss_pred hCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 257 RDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 257 ~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+.||+++++++|++++. +.+.+.+..+|+..++.+|.+|+|||.
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 57999999999999975 346666544465446999999999995
No 233
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.88 E-value=1.6e-05 Score=84.60 Aligned_cols=100 Identities=19% Similarity=0.328 Sum_probs=74.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.| ++++ ..+|+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~G--V~i~~~~~V~~ 248 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL--PY---------EDADAALVLEESFAERG--VRLFKNARAAS 248 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS--CC---------SSHHHHHHHHHHHHHTT--CEEETTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCC--CEEEeCCEEEE
Confidence 5789999999999999999999999999999987643 11 11245566777888888 4444 457888
Q ss_pred EECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 107 IDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
++.++..+.+... +|. ++++|.+|+|+|.+|+..
T Consensus 249 i~~~~~~v~v~~~--~g~---~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 249 VTRTGAGVLVTMT--DGR---TVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EEECSSSEEEEET--TSC---EEEESEEEECCCEEECCS
T ss_pred EEEeCCEEEEEEC--CCc---EEEcCEEEECCCCCcCCC
Confidence 8876543444321 143 799999999999998764
No 234
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.87 E-value=3.7e-05 Score=81.32 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=73.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.++++. ...++..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~------l~~~------d~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 253 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV------LRGF------DQQMAELVAASMEERGIPFL-RKTVPLSV 253 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCCEE-ETEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC------Cccc------CHHHHHHHHHHHHhCCCEEE-eCCEEEEE
Confidence 56899999999999999999999999999987421 1111 13455667778888885553 35678888
Q ss_pred ECCCC---EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAKN---EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~~---~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.... .|.+.+.. .....++++|.+|+|+|.+|+..
T Consensus 254 ~~~~~~~~~v~~~~~~--~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 254 EKQDDGKLLVKYKNVE--TGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EECTTSCEEEEEEETT--TCCEEEEEESEEEECSCEEECCG
T ss_pred EEcCCCcEEEEEecCC--CCceeEEEcCEEEECcccccCcC
Confidence 76332 35555421 11234799999999999988654
No 235
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.86 E-value=2.6e-05 Score=83.42 Aligned_cols=98 Identities=10% Similarity=0.219 Sum_probs=72.4
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEEE
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIKI 107 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i 107 (547)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.| ++++ ..+|+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~G--V~i~~~~~V~~i 281 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK--LI---------KDNETRAYVLDRMKEQG--MEIISGSNVTRI 281 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--TC---------CSHHHHHHHHHHHHHTT--CEEESSCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--cc---------ccHHHHHHHHHHHHhCC--cEEEECCEEEEE
Confidence 899999999999999999999999999999987532 11 12344566777788888 4444 5688888
Q ss_pred ECCC-C-----EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAAK-N-----EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~~-~-----~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
+.+. . .|.+.+ |+ .++++|.||+|+|.+|+..
T Consensus 282 ~~~~~~~v~~~~v~~~~----G~--~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 282 EEDANGRVQAVVAMTPN----GE--MRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp EECTTSBEEEEEEEETT----EE--EEEECSCEEECCCCEECCH
T ss_pred EEcCCCceEEEEEEECC----Cc--EEEEcCEEEECcCCccCCc
Confidence 7632 2 234332 31 2799999999999998753
No 236
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.86 E-value=3.3e-05 Score=81.79 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=71.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.++++. ...++..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~------l~~~------d~~~~~~l~~~l~~~gv~~~-~~~~v~~i 251 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP------LRGF------DQQMSSLVTEHMESHGTQFL-KGCVPSHI 251 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEEE-ETEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc------cccC------CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 46899999999999999999999999999998631 1111 13455667778888884442 34577777
Q ss_pred ECC-CC--EEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DAA-KN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~~-~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
... +. .+.+.+.. +....++++|.+|+|+|..|+..
T Consensus 252 ~~~~~~~~~v~~~~~~--~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 252 KKLPTNQLQVTWEDHA--SGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EECTTSCEEEEEEETT--TTEEEEEEESEEEECSCEEESCG
T ss_pred EEcCCCcEEEEEEeCC--CCeeEEEECCEEEEcccCCcccC
Confidence 652 22 35444321 12223689999999999988764
No 237
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.86 E-value=2e-05 Score=78.79 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=33.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFA 64 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~ 64 (547)
.++|+|||||++|+++|..|++. |++|+|||+.+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 47999999999999999999975 99999999987654
No 238
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.84 E-value=2.5e-05 Score=82.70 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=74.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.+ ++++ ..+|+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--~~---------~~~~~~~~l~~~l~~~G--v~i~~~~~V~ 256 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL--RN---------FDYDLRQLLNDAMVAKG--ISIIYEATVS 256 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHT--CEEESSCCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc--cc---------cCHHHHHHHHHHHHHCC--CEEEeCCEEE
Confidence 35799999999999999999999999999999987532 11 01234555677777777 5544 36788
Q ss_pred EEECCCC--EEEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 106 KIDAAKN--EVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 106 ~id~~~~--~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
.++.++. .|.+.+ |. ++++|.+|+|+|.+|+...
T Consensus 257 ~i~~~~~~v~v~~~~----g~---~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 257 QVQSTENCYNVVLTN----GQ---TICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EEEECSSSEEEEETT----SC---EEEESEEEECCCEEECCTT
T ss_pred EEEeeCCEEEEEECC----Cc---EEEcCEEEEeeCCCcCCCC
Confidence 8887654 344443 44 8999999999999887643
No 239
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.84 E-value=2.5e-05 Score=82.80 Aligned_cols=98 Identities=16% Similarity=0.229 Sum_probs=70.2
Q ss_pred CCeEEEECCchHHHHHHHhcCC----CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV----SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EA 102 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~----~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 102 (547)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+...-.. + +..+...+.+.+++.+ ++++ ..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-l---------~~~~~~~~~~~l~~~G--V~v~~~~ 247 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-L---------PEYLSNWTMEKVRREG--VKVMPNA 247 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-S---------CHHHHHHHHHHHHTTT--CEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-C---------CHHHHHHHHHHHHhcC--CEEEeCC
Confidence 5799999999999999999874 578999999875422111 1 1234455677778888 4444 44
Q ss_pred EEEEEECCCCE--EEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 103 EAIKIDAAKNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 103 ~v~~id~~~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
+|+.++.++.. |.+.+ |+ ++++|.+|+|+|.+|+.
T Consensus 248 ~V~~i~~~~~~~~v~l~d----G~---~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 248 IVQSVGVSSGKLLIKLKD----GR---KVETDHIVAAVGLEPNV 284 (493)
T ss_dssp CEEEEEEETTEEEEEETT----SC---EEEESEEEECCCEEECC
T ss_pred EEEEEEecCCeEEEEECC----CC---EEECCEEEECCCCCccH
Confidence 78888755444 44443 54 89999999999999865
No 240
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.83 E-value=4.1e-05 Score=81.73 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=68.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++... ++.. ..++...+.+.+++.++++. ...+++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~------l~~~------d~~~~~~~~~~l~~~GV~v~-~~~~v~~v 276 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL------LRGF------DQDMANKIGEHMEEHGIKFI-RQFVPIKV 276 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS------CHHHHHHHHHHHHHTTCEEE-ESEEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc------cccC------CHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 46799999999999999999999999999997421 1111 13455667777888884442 23344444
Q ss_pred ECC----CCE--EEEecCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 108 DAA----KNE--VFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 108 d~~----~~~--v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
... ... +.+.... +.+..++++|.+|+|+|.+|+...
T Consensus 277 ~~~~~~~~~~~~v~~~~~~--g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 277 EQIEAGTPGRLRVVAQSTN--SEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEECCTTCEEEEEEEESS--SSCEEEEEESEEEECSCEEESCSS
T ss_pred EEccCCCCceEEEEEEECC--CcEEEEEECCEEEEecCCcccCCC
Confidence 321 123 3333211 332346789999999999987643
No 241
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.81 E-value=0.00011 Score=76.70 Aligned_cols=98 Identities=19% Similarity=0.375 Sum_probs=72.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-------------------c---------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-------------------S--------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-------------------~--------- 242 (547)
..|+|||||++|+-+|..+++. +.+|+|+++.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~--------------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~ 92 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE--------------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNG 92 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTG
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccCh
Confidence 4799999999999999999874 678999998763210 0
Q ss_pred ----------------------------------c-----cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEec
Q 041537 243 ----------------------------------F-----DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIK 281 (547)
Q Consensus 243 ----------------------------------~-----~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~ 281 (547)
+ ...+.+.+.+.+++.||+++++++|+++. ++.+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~ 172 (447)
T 2i0z_A 93 RFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVIL 172 (447)
T ss_dssp GGGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEE
Confidence 0 13445566777788999999999999985 455332333
Q ss_pred cCCeEEEEeeceEEEccCCCCCc
Q 041537 282 STGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 282 ~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
.+|+. +.+|.||+|+|....|
T Consensus 173 ~~G~~--i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 173 QTGEV--LETNHVVIAVGGKSVP 193 (447)
T ss_dssp TTCCE--EECSCEEECCCCSSSG
T ss_pred CCCCE--EECCEEEECCCCCcCC
Confidence 45654 9999999999975543
No 242
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.81 E-value=8.1e-05 Score=79.76 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=73.9
Q ss_pred ccEEEEcCChhHHHHHHHHH-HHHHHhhhhhCCCCCCCceEEEEecCCccC--------Cc-------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELH-DYIQEDLINLYPTVKDLVRITLIQSGDHIL--------NS------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~-~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~~------------------- 242 (547)
.+|+|||||++|+.+|..|. +. +.+|+++++.+.+. |.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~--------------G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHEL--------------GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcC--------------CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 48999999999999999998 53 67999999976432 10
Q ss_pred ----------ccHHHHHHHHHHHHhCCc--EEEcCceEEEEeC--C--eEEEEeccCCeEEEEeeceEEEccCCCCCc
Q 041537 243 ----------FDERISSFAEKKFQRDGI--EVLTECRVVNVSD--K--EITMKIKSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 243 ----------~~~~~~~~~~~~l~~~GV--~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
..+++.+++.+.+++.|+ +++++++|++++. + ...+.. .+|+. +.||.||.|+|....|
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~G~~--i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT-DHGEV--YRAKYVVNAVGLLSAI 149 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE-TTSCE--EEEEEEEECCCSCCSB
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE-cCCCE--EEeCEEEECCcccccC
Confidence 024677888888899998 8999999998852 3 334443 45765 9999999999964444
No 243
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.81 E-value=5.3e-05 Score=81.38 Aligned_cols=93 Identities=14% Similarity=0.265 Sum_probs=72.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC--------c--------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN--------S-------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------~-------------------- 242 (547)
.+|+|||||++|+.+|..|.+. +.+|+++++.+.+.. .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQ--------------GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 4899999999999999999874 679999999764320 0
Q ss_pred ---------ccHHHHHHHHHHHHhCCc--EEEcCceEEEEe--CC--eEEEEeccCCeEEEEeeceEEEccCC
Q 041537 243 ---------FDERISSFAEKKFQRDGI--EVLTECRVVNVS--DK--EITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 243 ---------~~~~~~~~~~~~l~~~GV--~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
-.+++.+++.+.+++.|+ +++++++|++++ ++ ...+.. .+|++ +.+|.||.|+|.
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~-~~G~~--i~ad~lV~AtG~ 157 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT-DRGDE--VSARFLVVAAGP 157 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCS
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE-CCCCE--EEeCEEEECcCC
Confidence 124677888888899998 899999999984 33 334433 45765 999999999995
No 244
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.80 E-value=0.00024 Score=76.65 Aligned_cols=55 Identities=22% Similarity=0.185 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--C-Ce---EEEEeccCCeEEEEeeceEEEccCCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVS--D-KE---ITMKIKSTGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vv~a~G~~~ 302 (547)
+.+.+.+.+++.||+++++++|+++. + +. +.+.+ .+|+..++.+|.||+|+|-..
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcc
Confidence 44566677788999999999999984 3 33 34432 357655699999999999643
No 245
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=0.00013 Score=77.99 Aligned_cols=95 Identities=17% Similarity=0.264 Sum_probs=72.2
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC--ccC-----------C-cccHHHHHHHHHHH
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD--HIL-----------N-SFDERISSFAEKKF 255 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~il-----------~-~~~~~~~~~~~~~l 255 (547)
...|+|||||+.|+.+|..+++. +.+|++++... ... + ...+.+.+.+.+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~--------------G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARK--------------GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHV 277 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhC--------------CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 45799999999999999999874 67999997531 111 0 12357788888889
Q ss_pred HhCCcEEEcCceEEEEeCC-----eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 256 QRDGIEVLTECRVVNVSDK-----EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 256 ~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
++.||+++.+++|+.++.+ ...+.. .+|+. +.+|.||+|+|..
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~-~~g~~--~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIET-ASGAV--LKARSIIIATGAK 325 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEE-TTSCE--EEEEEEEECCCEE
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEE-CCCCE--EEcCEEEECCCCC
Confidence 9999999999999999642 344433 34654 9999999999953
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.79 E-value=5.5e-05 Score=79.87 Aligned_cols=104 Identities=12% Similarity=0.141 Sum_probs=73.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIK 106 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~ 106 (547)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.+ ++++ ..+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~~~~~l~~~g--v~i~~~~~v~~ 253 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--RS---------FDSMISTNCTEELENAG--VEVLKFSQVKE 253 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTT--CEEETTEEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--cc---------cCHHHHHHHHHHHHHCC--CEEEeCCEEEE
Confidence 5799999999999999999999999999999987533 11 11334556677788888 4444 467888
Q ss_pred EECCC-C---EEEEecCCCCCCc-eeeeecCEEEEccCCCccCC
Q 041537 107 IDAAK-N---EVFCKSNIDKETR-DFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 107 id~~~-~---~v~~~~~~~~g~~-~~~i~yD~LViAtG~~~~~~ 145 (547)
++... . .+.+.+.. .++. ..++++|.+|+|+|..|+..
T Consensus 254 i~~~~~~~~~~v~~~~~~-~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEECSSSEEEEEEECCTT-SCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEcCCCcEEEEEEccCC-CCcccceEEEcCEEEEeeccccCCC
Confidence 87543 2 23343211 0110 14799999999999988764
No 247
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.78 E-value=7.2e-05 Score=78.47 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=69.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC-------Cc---------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL-------NS--------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il-------~~--------------------- 242 (547)
..|+|||||+.|+.+|..|.+..... . ..+|+++++.+.+. +.
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~--------~-~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 101 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQ--------G-ALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPY 101 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHH--------C-CCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhccccc--------C-cccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCC
Confidence 37999999999999999999874210 0 06899999887421 00
Q ss_pred -----------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeCC----e---EEEEec-cCCeEEEEee
Q 041537 243 -----------------------FDERISSFAEKKFQRDGIEVLTECRVVNVSDK----E---ITMKIK-STGAVCSIPH 291 (547)
Q Consensus 243 -----------------------~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~----~---v~~~~~-~~G~~~~i~~ 291 (547)
....+.+++....++.+++++++++|++++.+ + +.+... .+|+..++.+
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~ 181 (463)
T 3s5w_A 102 SFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT 181 (463)
T ss_dssp SHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE
T ss_pred ChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe
Confidence 01344556666666779999999999998642 2 233321 1233335999
Q ss_pred ceEEEccCC
Q 041537 292 GLVLWSTGV 300 (547)
Q Consensus 292 D~vv~a~G~ 300 (547)
|.||+|+|.
T Consensus 182 d~lVlAtG~ 190 (463)
T 3s5w_A 182 RALVVSPGG 190 (463)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999995
No 248
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.77 E-value=0.00022 Score=78.07 Aligned_cols=35 Identities=9% Similarity=0.096 Sum_probs=31.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCC------CCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVS------SYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~------g~~Vtlid~~~~ 62 (547)
..||||||||.|||+||..|++. |.+|+|||+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999976 999999999753
No 249
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.77 E-value=0.00022 Score=72.98 Aligned_cols=96 Identities=13% Similarity=0.203 Sum_probs=70.2
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc------C-----C-------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI------L-----N------------------- 241 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i------l-----~------------------- 241 (547)
+|+|||||++|+-+|..|++. +.+|+++++.+.. - +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKA--------------GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 799999999999999999986 6788888876531 0 0
Q ss_pred ------------------------c-----cc-HHHHHHHHHHHHhCCcEEEcCceEEEEeCC---eEEEEeccCCeEEE
Q 041537 242 ------------------------S-----FD-ERISSFAEKKFQRDGIEVLTECRVVNVSDK---EITMKIKSTGAVCS 288 (547)
Q Consensus 242 ------------------------~-----~~-~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~ 288 (547)
. ++ ..+.+.+.+.+.+.|++++++++|++++.+ .+.+....+|+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01 334556667777889999999999999642 34433212576445
Q ss_pred EeeceEEEccCCC
Q 041537 289 IPHGLVLWSTGVG 301 (547)
Q Consensus 289 i~~D~vv~a~G~~ 301 (547)
+.+|.||.|.|..
T Consensus 150 ~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 150 LDCDYIAGCDGFH 162 (394)
T ss_dssp EECSEEEECCCTT
T ss_pred EEeCEEEECCCCC
Confidence 9999999999963
No 250
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.76 E-value=1.4e-05 Score=83.25 Aligned_cols=95 Identities=25% Similarity=0.336 Sum_probs=67.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc--c---------cHHHHHHHHHHHHhCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS--F---------DERISSFAEKKFQRDG 259 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--~---------~~~~~~~~~~~l~~~G 259 (547)
++|+|||||+.|+.+|..|+++. .+.+|+||++.+.+... + ...+...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 38999999999999999999842 26899999999865321 0 1111222334556789
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.+ .++.++.+...+.. .+|++ +.+|.+|+|+|..
T Consensus 71 v~~~~~-~v~~id~~~~~v~~-~~g~~--i~~d~liiAtG~~ 108 (430)
T 3h28_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCE
T ss_pred CEEEEE-EEEEEECCCCEEEE-CCCcE--EECCEEEEcCCcc
Confidence 999975 89999875433332 23654 9999999999953
No 251
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.76 E-value=7e-05 Score=80.31 Aligned_cols=97 Identities=14% Similarity=0.215 Sum_probs=73.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--------C---------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--------N--------------------- 241 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~--------------------- 241 (547)
.+|+|||||++|+.+|..|.+. +.+|+++++.+.+. |
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~--------------g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQA--------------GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 4899999999999999999864 67999999986431 0
Q ss_pred --------cccHHHHHHHHHHHHhCCc--EEEcCceEEEEeC--C--eEEEEeccCCeEEEEeeceEEEccCCCCCc
Q 041537 242 --------SFDERISSFAEKKFQRDGI--EVLTECRVVNVSD--K--EITMKIKSTGAVCSIPHGLVLWSTGVGTRP 304 (547)
Q Consensus 242 --------~~~~~~~~~~~~~l~~~GV--~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p 304 (547)
.-.+++.+++.+.+++.|+ +++++++|++++. + ...+.. .+|+. +.||.||.|+|....|
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL-DNEEV--VTCRFLISATGPLSAS 149 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE-TTTEE--EEEEEEEECCCSCBC-
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE-CCCCE--EEeCEEEECcCCCCCC
Confidence 0135778888888888888 8899999998853 2 234433 45765 9999999999964444
No 252
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.76 E-value=7.2e-05 Score=76.81 Aligned_cols=93 Identities=19% Similarity=0.297 Sum_probs=68.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC------------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL------------------------------ 240 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------------------------------ 240 (547)
.+|+|||||++|+.+|..|++. +.+|+++++.+.+-
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQ--------------GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG 72 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC
Confidence 3899999999999999999875 56777777654320
Q ss_pred -------------------------C-----cccHHHHHHHHHHHHhC-CcEEEcCceEEEEeC--CeE--EEEeccCCe
Q 041537 241 -------------------------N-----SFDERISSFAEKKFQRD-GIEVLTECRVVNVSD--KEI--TMKIKSTGA 285 (547)
Q Consensus 241 -------------------------~-----~~~~~~~~~~~~~l~~~-GV~v~~~~~V~~v~~--~~v--~~~~~~~G~ 285 (547)
+ .....+.+.+.+.+++. ||+++++++|++++. +++ .+.. .+|+
T Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~-~~g~ 151 (399)
T 2x3n_A 73 RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRL-NDGR 151 (399)
T ss_dssp EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEE-TTSC
T ss_pred CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEE-CCCC
Confidence 0 00135566677777777 999999999999853 445 4443 4476
Q ss_pred EEEEeeceEEEccCC
Q 041537 286 VCSIPHGLVLWSTGV 300 (547)
Q Consensus 286 ~~~i~~D~vv~a~G~ 300 (547)
. +.+|.||.|+|.
T Consensus 152 ~--~~ad~vV~AdG~ 164 (399)
T 2x3n_A 152 V--LRPRVVVGADGI 164 (399)
T ss_dssp E--EEEEEEEECCCT
T ss_pred E--EECCEEEECCCC
Confidence 4 999999999995
No 253
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.74 E-value=1.8e-05 Score=83.43 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=36.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCCCCccCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQNYFAFTP 67 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~~~~~~p 67 (547)
+++|+|||||++||+||++|++.|+ +|+|+|+++..++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999999999 999999998877654
No 254
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.73 E-value=0.00017 Score=77.86 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEe--C-Ce---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVS--D-KE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+.+.+.+.+++.||+|+++++|+++. + +. +.+.+ .+|+..++.+|.||+|+|..
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCc
Confidence 445566677788999999999999984 3 33 44443 25765569999999999963
No 255
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.70 E-value=0.00012 Score=72.22 Aligned_cols=94 Identities=16% Similarity=0.188 Sum_probs=66.8
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc--------c--------CCcc-----cHHHHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH--------I--------LNSF-----DERISSF 250 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~--------i--------l~~~-----~~~~~~~ 250 (547)
.|+||||||.|+.+|..+++. +.+|+++++.+. + .|.+ ++++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~--------------g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRS--------------SLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 699999999999999998875 678999997542 0 0111 2567788
Q ss_pred HHHHHHhCCcEEEcCceEEEEeC-CeEEEEeccCCeEEEEeeceEEEccCCCC
Q 041537 251 AEKKFQRDGIEVLTECRVVNVSD-KEITMKIKSTGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 251 ~~~~l~~~GV~v~~~~~V~~v~~-~~v~~~~~~~G~~~~i~~D~vv~a~G~~~ 302 (547)
..+.+++.++++........... +...... .++.+ +.+|.+|+|||..+
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~liiATG~~~ 121 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFT-EEGKE--VLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEE-TTCCE--EEEEEEEECCCEEE
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEE-CCCeE--EEEeEEEEcccccc
Confidence 88889999999887654333322 3333333 33554 99999999999643
No 256
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.70 E-value=2.6e-05 Score=79.39 Aligned_cols=44 Identities=23% Similarity=0.281 Sum_probs=38.0
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC-CCCccCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ-NYFAFTP 67 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~-~~~~~~p 67 (547)
+...+++|+|||||++||++|+.|++.|++|+|+|++ +..++..
T Consensus 40 ~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 40 PPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp SCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CCCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 3345679999999999999999999999999999999 7766543
No 257
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.69 E-value=2e-05 Score=82.63 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p 67 (547)
..++|||||||++||+||..|++.|++|+|+|++++.++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 45799999999999999999999999999999999987754
No 258
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.68 E-value=0.00029 Score=70.20 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=64.5
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC--------------------cccHHHHHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN--------------------SFDERISSFA 251 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------------------~~~~~~~~~~ 251 (547)
.|+|||||++|+.+|..|++. +.+|+|+|+.+.+.. ...+.+.+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~--------------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHC--------------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 799999999999999999975 689999998864310 1112222222
Q ss_pred H-------------------------------------------HHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeE
Q 041537 252 E-------------------------------------------KKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAV 286 (547)
Q Consensus 252 ~-------------------------------------------~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~ 286 (547)
. +.|. .|++++++++|++++ ++++.+.. .+|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~-~~g~~ 147 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLD-AEGQN 147 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEE-TTSCE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEe-CCCcC
Confidence 2 2222 289999999999995 35566654 45654
Q ss_pred EEEeeceEEEccCC
Q 041537 287 CSIPHGLVLWSTGV 300 (547)
Q Consensus 287 ~~i~~D~vv~a~G~ 300 (547)
...+|.||.|+|.
T Consensus 148 -~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 148 -HGPFSHVIIATPA 160 (336)
T ss_dssp -EEEESEEEECSCH
T ss_pred -ccccCEEEEcCCH
Confidence 2359999999993
No 259
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.67 E-value=0.00011 Score=73.06 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=32.5
Q ss_pred CeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCCc
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYFA 64 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~~ 64 (547)
.+|+|||||++|+++|..|++. |++|+|+|+++..+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 4899999999999999999976 99999999987654
No 260
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.65 E-value=0.00011 Score=81.18 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=72.3
Q ss_pred CCCeEEEEC--CchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEE
Q 041537 27 EKKRVVLLG--TGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEA 104 (547)
Q Consensus 27 ~~~~VvIIG--gG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 104 (547)
..++|+||| +|+.|+.+|..|++.|.+|+++++.+.+.- . .........+.+.+++.++++. ...+|
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~-----~-----~~~~~~~~~l~~~l~~~GV~i~-~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS-----W-----TNNTFEVNRIQRRLIENGVARV-TDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG-----G-----GGGGTCHHHHHHHHHHTTCEEE-ESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc-----c-----cccchhHHHHHHHHHHCCCEEE-cCcEE
Confidence 346799999 999999999999999999999998765321 1 0112234556777888884442 35689
Q ss_pred EEEECCCCEEEEecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 105 IKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 105 ~~id~~~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
+.|+.++..+..... + +..++++|.||+|+|.+|+.
T Consensus 591 ~~i~~~~~~v~~~~~---~-~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 591 VAVGAGGVTVRDTYA---S-IERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEETTEEEEEETTT---C-CEEEEECSEEEEESCEEECC
T ss_pred EEEECCeEEEEEccC---C-eEEEEECCEEEECCCCCCCh
Confidence 999876444433211 1 12489999999999998754
No 261
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.65 E-value=0.00024 Score=73.34 Aligned_cols=95 Identities=16% Similarity=0.315 Sum_probs=69.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc--------CCc--------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI--------LNS-------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i--------l~~-------------------- 242 (547)
..|+|||||++|+-+|..|++. +.+|+|+++.+.. .|.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~ 71 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS--------------GFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQ 71 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCc
Confidence 3899999999999999999864 6788888886410 000
Q ss_pred -------------------------------c-cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCe--EEEEeccCCeE
Q 041537 243 -------------------------------F-DERISSFAEKKFQRDGIEVLTECRVVNVS--DKE--ITMKIKSTGAV 286 (547)
Q Consensus 243 -------------------------------~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~--v~~~~~~~G~~ 286 (547)
+ ...+.+.+.+.+++.|++++.+++|++++ +++ +.+.. .+|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~ 150 (421)
T 3nix_A 72 QKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNK 150 (421)
T ss_dssp EECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCE
T ss_pred ccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCE
Confidence 0 12455666777778899999999999885 344 33333 45765
Q ss_pred EEEeeceEEEccCC
Q 041537 287 CSIPHGLVLWSTGV 300 (547)
Q Consensus 287 ~~i~~D~vv~a~G~ 300 (547)
.++.+|.||.|+|.
T Consensus 151 ~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 151 REIEARFIIDASGY 164 (421)
T ss_dssp EEEEEEEEEECCGG
T ss_pred EEEEcCEEEECCCC
Confidence 46999999999994
No 262
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.64 E-value=2.5e-05 Score=83.44 Aligned_cols=70 Identities=20% Similarity=0.197 Sum_probs=48.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhh------ccccCccccchhHHHHHHhCCCc
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVT------CGTVEARSIAEPVRNIIKKRNAE 96 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~------~g~~~~~~~~~~~~~~~~~~~~~ 96 (547)
.+++|||||||++||+||..|++.|++|+|+|+++..++........ .|..-.......+.+++++.++.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 78 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLE 78 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCc
Confidence 35789999999999999999999999999999999887654322211 11000001134567788888843
No 263
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.64 E-value=0.00024 Score=70.12 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=68.4
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc---cC--------Cc----ccHHHHHHHHHHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH---IL--------NS----FDERISSFAEKKFQ 256 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---il--------~~----~~~~~~~~~~~~l~ 256 (547)
-|+|||+||.|+.+|..+++. +.+|+|+++... ++ |. ..+++.....+...
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~--------------g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRA--------------NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 689999999999999999875 689999997531 11 22 13567777778888
Q ss_pred hCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 257 RDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 257 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+.++.+..+..+............ .++++ +.+|.+|+|||..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~d~liiAtGs~ 115 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVIN-FGNKE--LTAKAVIIATGAE 115 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEE-CSSCE--EEEEEEEECCCEE
T ss_pred hccccccceeeeeeeeeecceeec-cCCeE--EEeceeEEcccCc
Confidence 889998888777766554433333 23554 9999999999953
No 264
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.63 E-value=1.9e-05 Score=84.22 Aligned_cols=41 Identities=24% Similarity=0.390 Sum_probs=37.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~~~~~~p 67 (547)
..++|+|||||++||+||+.|++.| ++|+|+|+++..++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 4579999999999999999999999 9999999999887754
No 265
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.63 E-value=3e-05 Score=80.40 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=36.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~~~~~~p 67 (547)
++++|+|||||++||+||..|++.| ++|+|+|+++..++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4579999999999999999999999 8999999998876643
No 266
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.63 E-value=0.00011 Score=77.26 Aligned_cols=101 Identities=11% Similarity=0.184 Sum_probs=73.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEE-EEEE
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWE-AEAI 105 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 105 (547)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++...+.+.+++.+ ++++. .+|+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--~~---------~~~~~~~~l~~~l~~~G--v~i~~~~~v~ 235 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--SR---------FDQDMRRGLHAAMEEKG--IRILCEDIIQ 235 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTT--CEEECSCCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCC--CEEECCCEEE
Confidence 36799999999999999999999999999999987532 11 11344566777788888 44443 6788
Q ss_pred EEECCC-CEEEEe-cCCCCCCceeeeecCEEEEccCCCccCCC
Q 041537 106 KIDAAK-NEVFCK-SNIDKETRDFSLEYDYLIIAVGAQVNTFG 146 (547)
Q Consensus 106 ~id~~~-~~v~~~-~~~~~g~~~~~i~yD~LViAtG~~~~~~~ 146 (547)
.++.+. +.+.+. .. +| ++++|.+|+|+|.+|+...
T Consensus 236 ~i~~~~~~~~~v~~~~--~g----~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 236 SVSADADGRRVATTMK--HG----EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEEECTTSCEEEEESS--SC----EEEESEEEECSCEEESCTT
T ss_pred EEEEcCCCEEEEEEcC--CC----eEEeCEEEEeeCcccCCCC
Confidence 887653 323332 21 02 3999999999999887653
No 267
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.62 E-value=2.4e-05 Score=80.63 Aligned_cols=41 Identities=12% Similarity=0.276 Sum_probs=36.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC-CCeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS-SYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~-g~~Vtlid~~~~~~~~p 67 (547)
.+++|+|||||++||++|..|++. |++|+|+|+++..++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 367999999999999999999987 99999999998877654
No 268
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.62 E-value=7e-05 Score=81.32 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=31.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCC--CeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSS--YDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g--~~Vtlid~~~~ 62 (547)
..+|||||||+|||++|..|++.| .+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 469999999999999999999888 99999999753
No 269
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.61 E-value=2.4e-05 Score=81.49 Aligned_cols=35 Identities=31% Similarity=0.395 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++++|+|||||++|+++|..|++.|++|+|||+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 44799999999999999999999999999999986
No 270
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.60 E-value=0.00019 Score=75.19 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=69.9
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN----------------------------- 241 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------------------------- 241 (547)
..|+|||||++|+-+|..|++. +.+|+|+++.+....
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~--------------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~ 72 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRR--------------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELEN 72 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSS--------------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHh
Confidence 3899999999999999999764 577777776543100
Q ss_pred -------------------c----c-cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeE---EEEeccCCeEEEEeec
Q 041537 242 -------------------S----F-DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEI---TMKIKSTGAVCSIPHG 292 (547)
Q Consensus 242 -------------------~----~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v---~~~~~~~G~~~~i~~D 292 (547)
. + ...+.+.+.+.+++.|++++++++|+++. ++.+ ++.+..+|+..++.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad 152 (453)
T 3atr_A 73 KINGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSK 152 (453)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECS
T ss_pred hhcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcC
Confidence 0 0 12466677777788999999999999885 4444 3432114764469999
Q ss_pred eEEEccCCC
Q 041537 293 LVLWSTGVG 301 (547)
Q Consensus 293 ~vv~a~G~~ 301 (547)
.||.|+|..
T Consensus 153 ~VV~AdG~~ 161 (453)
T 3atr_A 153 VVVEATGYS 161 (453)
T ss_dssp EEEECCGGG
T ss_pred EEEECcCCc
Confidence 999999953
No 271
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.60 E-value=0.00043 Score=74.72 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEe--C-Ce---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVS--D-KE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+.+.+.+.+++.||+++++++|+++. + +. |.+.+ .+|+..++.+|.||+|+|..
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCC
Confidence 345566777788999999999999984 3 33 44443 25765569999999999953
No 272
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.60 E-value=1.7e-05 Score=83.21 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=35.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCC------CeEEEEcCCCCCccC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSS------YDVQVVSPQNYFAFT 66 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g------~~Vtlid~~~~~~~~ 66 (547)
+++|+|||||++||+||++|++.| ++|+|+|+++..++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 579999999999999999999888 999999999877654
No 273
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.60 E-value=0.00021 Score=73.34 Aligned_cols=100 Identities=17% Similarity=0.201 Sum_probs=68.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc------ccHHHHH---------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS------FDERISS--------------- 249 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~------~~~~~~~--------------- 249 (547)
.+|+|||||++|+.+|..|++. +.+|+++++.+...+. +.+...+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA--------------GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 4899999999999999999875 6899999987653211 1222111
Q ss_pred ----------------------------HHHHHHHh--CCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEc
Q 041537 250 ----------------------------FAEKKFQR--DGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWS 297 (547)
Q Consensus 250 ----------------------------~~~~~l~~--~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a 297 (547)
.+.+.|.+ .|++++++++|++++ ++++++.. .+|+. +.+|.||.|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~~ad~vV~A 148 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRF-SDGTK--AEANWVIGA 148 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEE-TTSCE--EEESEEEEC
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEEC
Confidence 12222222 388999999999985 34566554 44664 999999999
Q ss_pred cCCCCCcchHHH
Q 041537 298 TGVGTRPAIKDF 309 (547)
Q Consensus 298 ~G~~~~p~~~~l 309 (547)
.|. ...+...
T Consensus 149 dG~--~S~vr~~ 158 (397)
T 2vou_A 149 DGG--ASVVRKR 158 (397)
T ss_dssp CCT--TCHHHHH
T ss_pred CCc--chhHHHH
Confidence 994 4444443
No 274
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.59 E-value=4.1e-05 Score=80.36 Aligned_cols=90 Identities=14% Similarity=0.145 Sum_probs=68.2
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--------Ccc--cHHHHHHHHHHHHhCC
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--------NSF--DERISSFAEKKFQRDG 259 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~~~--~~~~~~~~~~~l~~~G 259 (547)
.++|+|||+|+.|+.+|..|.+.. ++.+|+++++.+.+. |.+ ...+...+.+.+++.|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCC
Confidence 358999999999999999998762 138999999988765 322 2356777788888999
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.++.|. ..+.+.+ . .+.+|.||+|||..
T Consensus 74 v~~~~~~~v~----~~V~~~~---~---~~~~d~lVlAtGs~ 105 (460)
T 1cjc_A 74 CAFYGNVEVG----RDVTVQE---L---QDAYHAVVLSYGAE 105 (460)
T ss_dssp EEEEBSCCBT----TTBCHHH---H---HHHSSEEEECCCCC
T ss_pred cEEEeeeEEe----eEEEecc---c---eEEcCEEEEecCcC
Confidence 9999997762 2333221 2 27899999999965
No 275
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.59 E-value=0.00031 Score=75.98 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=67.3
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-cC-----------------------Cc-----
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-IL-----------------------NS----- 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~----- 242 (547)
.|+|||||+.|+++|..+++. +.+|.|+++.+. +. ..
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARM--------------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhC--------------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 799999999999999999985 689999998631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeece
Q 041537 243 -------------------------FD-ERISSFAEKKFQR-DGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGL 293 (547)
Q Consensus 243 -------------------------~~-~~~~~~~~~~l~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 293 (547)
.+ ..+.+.+.+.+++ .||+++ ++.|+++. ++.+......+|.. +.+|.
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~--I~Ad~ 172 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLK--FRAKA 172 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEE--EEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCE--EECCE
Confidence 01 1345566677777 699994 67899884 45554333345754 99999
Q ss_pred EEEccCCC
Q 041537 294 VLWSTGVG 301 (547)
Q Consensus 294 vv~a~G~~ 301 (547)
||.|+|..
T Consensus 173 VVLATGt~ 180 (651)
T 3ces_A 173 VVLTVGTF 180 (651)
T ss_dssp EEECCSTT
T ss_pred EEEcCCCC
Confidence 99999964
No 276
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.57 E-value=4.3e-05 Score=80.82 Aligned_cols=41 Identities=27% Similarity=0.351 Sum_probs=36.9
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
.+.++|+|||||++||+||+.|++.|++|+|+|+++..++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 34679999999999999999999999999999999887664
No 277
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.57 E-value=4.1e-05 Score=80.65 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=36.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p 67 (547)
...++|+|||||++||+||..|++.|++|+|+|+++..++..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 446799999999999999999999999999999999877654
No 278
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.56 E-value=0.00042 Score=70.42 Aligned_cols=52 Identities=19% Similarity=0.219 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
..+.+.+.+.+++.|++++++++|++++. +.+.+.. .+| . +.+|.||+|+|.
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~-~~g-~--~~a~~vV~A~G~ 217 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKT-PSG-D--VWANHVVVASGV 217 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEE-TTE-E--EEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEc-CCc-e--EEcCEEEECCCh
Confidence 34667777888899999999999999964 4454443 334 3 999999999995
No 279
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.56 E-value=0.0002 Score=75.25 Aligned_cols=93 Identities=13% Similarity=0.177 Sum_probs=68.6
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-----------------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS----------------------------- 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~----------------------------- 242 (547)
.|+|||||+.|+.+|..+++. +.+|+||++.+.+...
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~--------------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKA--------------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 799999999999999999875 6899999977654211
Q ss_pred --ccH-H----------HH--HHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 243 --FDE-R----------IS--SFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 243 --~~~-~----------~~--~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
++. . +. ..+.+.+++.||+++.+ .+..++++.+.+.. .+|+..++.+|.+|+|+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~-~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKT-DEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEE-TTSCEEEEEEEEEEECCCE
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEc-CCCcEEEEecCEEEECCCC
Confidence 000 0 01 33444556779999988 68888888877765 3465445899999999995
No 280
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.55 E-value=0.00054 Score=69.89 Aligned_cols=96 Identities=18% Similarity=0.350 Sum_probs=66.5
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC------------------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN------------------------------ 241 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~------------------------------ 241 (547)
.|+|||||++|+-+|..|++. +.+|+|+++.+.+..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~--------------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 799999999999999999875 456666666542100
Q ss_pred -------------cc--------------cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEE-EEeccCCeEEEEee
Q 041537 242 -------------SF--------------DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEIT-MKIKSTGAVCSIPH 291 (547)
Q Consensus 242 -------------~~--------------~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~-~~~~~~G~~~~i~~ 291 (547)
.+ ...+.+.+.+.+++.|++++.+++|++++ ++.+. +.....++..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 00 12345667777788899999999999885 34443 22211233335999
Q ss_pred ceEEEccCCC
Q 041537 292 GLVLWSTGVG 301 (547)
Q Consensus 292 D~vv~a~G~~ 301 (547)
|.||.|+|..
T Consensus 152 ~~vV~A~G~~ 161 (397)
T 3cgv_A 152 KMVIAADGFE 161 (397)
T ss_dssp EEEEECCCTT
T ss_pred CEEEECCCcc
Confidence 9999999953
No 281
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.53 E-value=0.00039 Score=68.43 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=61.3
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc---c---CC-------cccHHHHHHHHHHHHhC
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH---I---LN-------SFDERISSFAEKKFQRD 258 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---i---l~-------~~~~~~~~~~~~~l~~~ 258 (547)
-|+|||+||.|+.+|..+++. +.+|+++++... + .| ..++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRA--------------RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 689999999999999888765 679999997642 0 01 12345666666666666
Q ss_pred C-cEEEcCceEEEEe---CCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 259 G-IEVLTECRVVNVS---DKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 259 G-V~v~~~~~V~~v~---~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+ +.++.. .+..+. .+..++.. .+|++ +.+|.||+|||..
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~~~~v~~-~~g~~--~~a~~liiATGs~ 116 (304)
T 4fk1_A 74 PSVHYYEK-TVVMITKQSTGLFEIVT-KDHTK--YLAERVLLATGMQ 116 (304)
T ss_dssp TTEEEEEC-CEEEEEECTTSCEEEEE-TTCCE--EEEEEEEECCCCE
T ss_pred CCEEEEee-EEEEeeecCCCcEEEEE-CCCCE--EEeCEEEEccCCc
Confidence 5 555544 444442 23344443 34665 9999999999964
No 282
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.51 E-value=0.00012 Score=77.69 Aligned_cols=101 Identities=13% Similarity=0.261 Sum_probs=70.6
Q ss_pred CeEEEECCchHHHHHHHhcCC--------------CCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDV--------------SSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRN 94 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~--------------~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~ 94 (547)
.+++|||||+.|+.+|..|+. .+.+|+|||..+... |.+ +..+.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--~~~---------~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--NMF---------EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--TTS---------CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--cCC---------CHHHHHHHHHHHHhcc
Confidence 479999999999999988752 246899999987632 111 1345566778888999
Q ss_pred CcEEEEEEEEEEEECCCCEEEEecCCCCCC-ceeeeecCEEEEccCCCcc
Q 041537 95 AEIQFWEAEAIKIDAAKNEVFCKSNIDKET-RDFSLEYDYLIIAVGAQVN 143 (547)
Q Consensus 95 ~~v~~~~~~v~~id~~~~~v~~~~~~~~g~-~~~~i~yD~LViAtG~~~~ 143 (547)
+++. ...+|+.++.+...+..... +|. ...++++|.+|+|+|..|+
T Consensus 287 V~v~-~~~~v~~v~~~~~~~~~~~~--dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVH-LRTAVAKVEEKQLLAKTKHE--DGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEE-TTEEEEEECSSEEEEEEECT--TSCEEEEEEECSEEEECCCEECC
T ss_pred eeee-cCceEEEEeCCceEEEEEec--CcccceeeeccCEEEEccCCcCC
Confidence 6553 46789999866443333321 132 1247999999999998765
No 283
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.50 E-value=0.00045 Score=71.14 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=69.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCce-EEEEecCCccCCc-----c---------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVR-ITLIQSGDHILNS-----F--------------------- 243 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~il~~-----~--------------------- 243 (547)
..|+|||||++|+-+|..|++. +.+ |+|+++.+.+.+. +
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~ 70 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQA--------------GIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--------------CCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhC
Confidence 3899999999999999999875 567 8888876542110 0
Q ss_pred -----------------------------------cHHHHHHHHHHHHh-CC-cEEEcCceEEEEeC-CeEEEEec--cC
Q 041537 244 -----------------------------------DERISSFAEKKFQR-DG-IEVLTECRVVNVSD-KEITMKIK--ST 283 (547)
Q Consensus 244 -----------------------------------~~~~~~~~~~~l~~-~G-V~v~~~~~V~~v~~-~~v~~~~~--~~ 283 (547)
...+.+.+.+.+++ .| ++++++++|++++. +++.+... .+
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~ 150 (410)
T 3c96_A 71 IPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGH 150 (410)
T ss_dssp EEECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETT
T ss_pred CCcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCC
Confidence 01344556666665 36 68999999998863 44544332 23
Q ss_pred CeEEEEeeceEEEccCCCCCcchHH
Q 041537 284 GAVCSIPHGLVLWSTGVGTRPAIKD 308 (547)
Q Consensus 284 G~~~~i~~D~vv~a~G~~~~p~~~~ 308 (547)
|+..++.+|.||.|.|. ...+..
T Consensus 151 g~~~~~~ad~vV~AdG~--~S~vR~ 173 (410)
T 3c96_A 151 GKPQALGADVLVGADGI--HSAVRA 173 (410)
T ss_dssp SCEEEEEESEEEECCCT--TCHHHH
T ss_pred CCceEEecCEEEECCCc--cchhHH
Confidence 64345999999999994 444433
No 284
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.50 E-value=0.00012 Score=80.37 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHhcCC-----CCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV-----SSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~-----~g~~Vtlid~~~~ 62 (547)
..+|+|||||++||++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4799999999999999999999 9999999998754
No 285
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.49 E-value=6.9e-05 Score=79.35 Aligned_cols=53 Identities=11% Similarity=0.107 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCC-cEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 245 ERISSFAEKKFQRDG-IEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 245 ~~~~~~~~~~l~~~G-V~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
..+.+.+.+.+++.| ++|++++.|++|+ ++++.+.. .+|+. +.+|.||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTA-RDGRE--FVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEE-TTCCE--EEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCCH
Confidence 367788888888898 9999999999995 34566654 34654 999999999995
No 286
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.49 E-value=3.6e-05 Score=80.47 Aligned_cols=69 Identities=12% Similarity=0.209 Sum_probs=47.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh-----hccccCccccchhHHHHHHhCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV-----TCGTVEARSIAEPVRNIIKKRNAE 96 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 96 (547)
+++|+|||||++||+||..|++.|++|+|+|+++..++....... -.|..-.......+.+++++.++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 579999999999999999999999999999999887665422211 011000001134567778888743
No 287
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.48 E-value=6e-05 Score=77.25 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=37.1
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p 67 (547)
....+|+|||||++||++|..|++.|.+|+|+|+++..++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 346799999999999999999999999999999998876543
No 288
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.47 E-value=0.00077 Score=72.07 Aligned_cols=56 Identities=11% Similarity=0.265 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEe--CC----eEEEEeccCCeEEEEeeceEEEccCC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNVS--DK----EITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~----~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
..+.+.+.+.+++.|++++++++|++++ ++ ++++...+.+...++.||.||.|.|.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 3566677788888999999999999985 34 55554322222335999999999995
No 289
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.47 E-value=0.00059 Score=73.11 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=71.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC--------C-------------cc------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL--------N-------------SF------ 243 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~-------------~~------ 243 (547)
..|+|||||++|+.+|..|.+. +.+|+++++.+.+. | .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--------------GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 4899999999999999999875 67999999876431 1 00
Q ss_pred ----------cHHHHHHHHHHHHhCC--cEEEcCceEEEEeC--C--eEEEEeccCCeEEEEeeceEEEccCCCCCcc
Q 041537 244 ----------DERISSFAEKKFQRDG--IEVLTECRVVNVSD--K--EITMKIKSTGAVCSIPHGLVLWSTGVGTRPA 305 (547)
Q Consensus 244 ----------~~~~~~~~~~~l~~~G--V~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~ 305 (547)
.+++.+++....++.+ ++++++++|++++. + ...+.. .+|++ +.+|.||.|+|....|.
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHGDR--IRARYLIMASGQLSVPQ 157 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCSCCCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE-CCCCE--EEeCEEEECcCCCCCCC
Confidence 1345666666667765 67899999998852 2 344443 45764 99999999999754443
No 290
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.47 E-value=5.7e-05 Score=79.54 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=35.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC--CeEEEEcCCCCCccC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS--YDVQVVSPQNYFAFT 66 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g--~~Vtlid~~~~~~~~ 66 (547)
++++|+|||||++||++|++|++.| ++|+|+|+++..++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 4679999999999999999999888 999999998876653
No 291
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.46 E-value=7.6e-05 Score=79.17 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=36.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p 67 (547)
++++|+|||||++||++|..|++.|++|+|+|+++..++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 35799999999999999999999999999999998876643
No 292
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.46 E-value=6.4e-05 Score=76.15 Aligned_cols=35 Identities=34% Similarity=0.508 Sum_probs=32.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++.+|+|||||++|+++|++|++.|++|+|||++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35799999999999999999999999999999875
No 293
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.45 E-value=0.0003 Score=76.40 Aligned_cols=104 Identities=16% Similarity=0.250 Sum_probs=65.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEEEE
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKI 107 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 107 (547)
.++|+|||||+.|+.+|..|++.|.+||||++. .. ++.. ..++...+.+.+++.++++. ....++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~-----l~~~------d~~~~~~~~~~l~~~gv~i~-~~~~v~~v 352 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL-----LRGF------DQQMAEKVGDYMENHGVKFA-KLCVPDEI 352 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS-----STTS------CHHHHHHHHHHHHHTTCEEE-ETEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC-----cCcC------CHHHHHHHHHHHHhCCCEEE-ECCeEEEE
Confidence 468999999999999999999999999999986 21 1110 12334556667777884432 23344444
Q ss_pred EC-------C--CCEEEEecCCCCCCceeeeecCEEEEccCCCccCC
Q 041537 108 DA-------A--KNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTF 145 (547)
Q Consensus 108 d~-------~--~~~v~~~~~~~~g~~~~~i~yD~LViAtG~~~~~~ 145 (547)
.. . ...+.+.....+|+ +.++++|.+|+|+|.+|+..
T Consensus 353 ~~~~~~~~~~~~~~~~~v~~~~~~g~-~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 353 KQLKVVDTENNKPGLLLVKGHYTDGK-KFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEECCBTTTTBCCEEEEEEEETTSC-EEEEEESEEEECSCEEECGG
T ss_pred EeccccccccCCCceEEEEEEeCCCc-EEeccCCEEEEEeCCccccC
Confidence 21 1 13333221000143 23456999999999998753
No 294
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.45 E-value=8.2e-05 Score=76.19 Aligned_cols=39 Identities=15% Similarity=0.423 Sum_probs=35.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
.++|+|||||++|+++|..|++.|++|+|+|+++..++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 469999999999999999999999999999999887654
No 295
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.44 E-value=0.00065 Score=72.25 Aligned_cols=96 Identities=18% Similarity=0.324 Sum_probs=68.9
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc--------CC---------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI--------LN--------------------- 241 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i--------l~--------------------- 241 (547)
..|+|||||+.|+-+|..|++. +.+|+|+++.+.. .|
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~--------------G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~ 73 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR--------------GHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGF 73 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCC
Confidence 4899999999999999999864 5677777766410 00
Q ss_pred ---------------------------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce---EEEEecc
Q 041537 242 ---------------------------------SF-DERISSFAEKKFQRDGIEVLTECRVVNVSD--KE---ITMKIKS 282 (547)
Q Consensus 242 ---------------------------------~~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~---v~~~~~~ 282 (547)
.+ ...+.+.+.+.+++.||+++.+++|+++.. +. +.+.. .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~ 152 (512)
T 3e1t_A 74 PIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-T 152 (512)
T ss_dssp CEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-S
T ss_pred ccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-C
Confidence 01 124556677777889999999999998853 43 44443 3
Q ss_pred CCeEEEEeeceEEEccCCC
Q 041537 283 TGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 283 ~G~~~~i~~D~vv~a~G~~ 301 (547)
+|+..++.+|.||.|+|..
T Consensus 153 dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 153 EGVELMAHARFIVDASGNR 171 (512)
T ss_dssp SSCEEEEEEEEEEECCCTT
T ss_pred CCCEEEEEcCEEEECCCcc
Confidence 4654459999999999963
No 296
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.43 E-value=0.00071 Score=68.42 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+.+.+.+.+++.|++++.+++|++++. +.+.+.. .+|+ +.+|.||+|+|..
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~-~~g~---~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIET-ADGE---YQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCE---EEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEE-CCCe---EEcCEEEEcCCcc
Confidence 4555666777889999999999999853 4455543 3453 9999999999953
No 297
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.43 E-value=0.00088 Score=72.19 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=66.8
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-cC-----------------------Cc-----
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-IL-----------------------NS----- 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~----- 242 (547)
.|+|||||+.|+++|..+++. +.+|.|+++.+. +. +.
T Consensus 29 DVIVIGgG~AGl~AAlalAr~--------------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARM--------------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 799999999999999999985 689999998631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeece
Q 041537 243 -------------------------FD-ERISSFAEKKFQR-DGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGL 293 (547)
Q Consensus 243 -------------------------~~-~~~~~~~~~~l~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 293 (547)
.+ ..+.+.+.+.+++ .||+++ ++.|+++. ++.+....+.+|.. +.+|.
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~--i~Ada 171 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVE--YKTKA 171 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCE--EECSE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 00 1345556677777 599995 67898874 45554333345764 99999
Q ss_pred EEEccCCC
Q 041537 294 VLWSTGVG 301 (547)
Q Consensus 294 vv~a~G~~ 301 (547)
||+|+|..
T Consensus 172 VVLATG~~ 179 (637)
T 2zxi_A 172 VVVTTGTF 179 (637)
T ss_dssp EEECCTTC
T ss_pred EEEccCCC
Confidence 99999963
No 298
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.41 E-value=7e-05 Score=78.53 Aligned_cols=93 Identities=17% Similarity=0.105 Sum_probs=67.6
Q ss_pred ccEEEEcCChhHHHHHHHHHH-HHHHhhhhhCCCCCCCceEEEEecCCccC--------Cc--ccHHHHHHHHHHHHhCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHD-YIQEDLINLYPTVKDLVRITLIQSGDHIL--------NS--FDERISSFAEKKFQRDG 259 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~~--~~~~~~~~~~~~l~~~G 259 (547)
++|+|||+|+.|+.+|..|.+ ... ....+.+|+++++.+.+. |. ....+...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 521 001158999999987654 21 23456777778888899
Q ss_pred cEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 260 IEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 260 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
|+++.++.+ +..+.+.+ ++ +.+|.||+|+|..
T Consensus 76 v~~~~~v~v----~~~v~~~~---~~---~~~d~lViAtG~~ 107 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQPGE---LS---ERYDAVIYAVGAQ 107 (456)
T ss_dssp EEEEESCCB----TTTBCHHH---HH---HHSSEEEECCCCC
T ss_pred CEEEeeEEE----CCEEEECC---Ce---EeCCEEEEeeCCC
Confidence 999988654 33344322 43 8899999999974
No 299
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.40 E-value=8.3e-05 Score=78.78 Aligned_cols=70 Identities=23% Similarity=0.191 Sum_probs=48.4
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhh-------hccccCccccchhHHHHHHhCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSV-------TCGTVEARSIAEPVRNIIKKRNA 95 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~-------~~g~~~~~~~~~~~~~~~~~~~~ 95 (547)
..+++|+|||||++||++|..|++.|++|+|+|+++..+........ -.|..........+.+++++.++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~ 107 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDL 107 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCC
Confidence 34679999999999999999999999999999999887664322111 01110001113456778888884
No 300
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.40 E-value=0.00077 Score=68.40 Aligned_cols=95 Identities=17% Similarity=0.337 Sum_probs=67.3
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC------------------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN------------------------------ 241 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~------------------------------ 241 (547)
-|+|||||++|+-+|..|++. +.+|+|+|+.+.+..
T Consensus 6 DViIVGaGpaGl~~A~~La~~--------------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 599999999999999999986 567777776543210
Q ss_pred --------------------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEE-eccCCeEEEEee
Q 041537 242 --------------------------SF-DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMK-IKSTGAVCSIPH 291 (547)
Q Consensus 242 --------------------------~~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~-~~~~G~~~~i~~ 291 (547)
.+ -..+.+.+.+.+++.|++++.+++++.+. ++.+... ...+|+..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 00 12345566677788899999999998873 4444322 223466556999
Q ss_pred ceEEEccCC
Q 041537 292 GLVLWSTGV 300 (547)
Q Consensus 292 D~vv~a~G~ 300 (547)
|+||-|.|.
T Consensus 152 ~~vIgAdG~ 160 (397)
T 3oz2_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred eEEEeCCcc
Confidence 999999995
No 301
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.39 E-value=0.00082 Score=69.07 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=66.0
Q ss_pred hccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC--------------------------
Q 041537 188 KRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-------------------------- 241 (547)
Q Consensus 188 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-------------------------- 241 (547)
.+...|+|||||++|+-+|..|++. +.+|+|+|+.+.+-+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~ 86 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS--------------GIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMET 86 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHh
Confidence 3446899999999999999999875 578888887653210
Q ss_pred --------------------cc-----------------cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEecc
Q 041537 242 --------------------SF-----------------DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKS 282 (547)
Q Consensus 242 --------------------~~-----------------~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~ 282 (547)
.+ ...+.+.+.+.+++ ++++++++|++++ ++++.+.. .
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~-~ 163 (407)
T 3rp8_A 87 FGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWF-T 163 (407)
T ss_dssp HSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEE-T
T ss_pred hcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEE-c
Confidence 00 02234444455444 8899999999885 45666654 4
Q ss_pred CCeEEEEeeceEEEccCC
Q 041537 283 TGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 283 ~G~~~~i~~D~vv~a~G~ 300 (547)
+|+. +.+|.||-|.|.
T Consensus 164 ~g~~--~~a~~vV~AdG~ 179 (407)
T 3rp8_A 164 DGSS--ASGDLLIAADGS 179 (407)
T ss_dssp TSCE--EEESEEEECCCT
T ss_pred CCCE--EeeCEEEECCCc
Confidence 5764 999999999995
No 302
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.39 E-value=9.1e-05 Score=75.33 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=35.0
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
++|+|||||++|+++|..|++.|++|+|+|+++..++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 58999999999999999999999999999999877654
No 303
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.37 E-value=0.00061 Score=68.23 Aligned_cols=94 Identities=22% Similarity=0.292 Sum_probs=63.4
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc--------------------c---cH---
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS--------------------F---DE--- 245 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--------------------~---~~--- 245 (547)
+|+|||||++|+-+|..|.+.. ..+.+|+++|+.+.+... + +.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~-----------~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~ 71 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT-----------SGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAK 71 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC------------CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhc-----------cCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHH
Confidence 7999999999999999998610 026899999987532110 0 00
Q ss_pred HH--------------------------------------HHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCe
Q 041537 246 RI--------------------------------------SSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGA 285 (547)
Q Consensus 246 ~~--------------------------------------~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~ 285 (547)
.+ ........++.|++|+++++|++++ ++++.+.. .+|+
T Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~-~~g~ 150 (342)
T 3qj4_A 72 KHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSK-QTGS 150 (342)
T ss_dssp HTHHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-SSSC
T ss_pred HHHHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEE-CCCC
Confidence 11 1122223334489999999999995 34566654 3465
Q ss_pred EEEEeeceEEEccC
Q 041537 286 VCSIPHGLVLWSTG 299 (547)
Q Consensus 286 ~~~i~~D~vv~a~G 299 (547)
. +.+|.||+|+.
T Consensus 151 ~--~~ad~vV~A~p 162 (342)
T 3qj4_A 151 P--EQFDLIVLTMP 162 (342)
T ss_dssp C--EEESEEEECSC
T ss_pred E--EEcCEEEECCC
Confidence 4 89999999987
No 304
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.36 E-value=0.0015 Score=69.31 Aligned_cols=62 Identities=26% Similarity=0.312 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC-Ce---EEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHH
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSD-KE---ITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFME 311 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~-~~---v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~ 311 (547)
.+...+.+.+++.|++++++++|+++.. ++ +.+.+..+|+..++.+|.||.|+| ++...+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG----~~s~~l~~ 215 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATG----PWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCG----GGHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCC----hhHHHHHH
Confidence 4566677778889999999999999853 22 344332357644599999999999 44444544
No 305
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.35 E-value=0.0023 Score=65.30 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+...+.+.+++.|++++++++|++++ ++.+.+.. .+| . +.+|.||.|+|.
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t-~~g-~--i~a~~VV~A~G~ 206 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDADGVSVTT-DRG-T--YRAGKVVLACGP 206 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-SSC-E--EEEEEEEECCGG
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE-CCC-E--EEcCEEEEcCCc
Confidence 44556667778899999999999985 45566554 334 3 999999999994
No 306
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.31 E-value=9.1e-05 Score=75.66 Aligned_cols=35 Identities=20% Similarity=0.484 Sum_probs=32.0
Q ss_pred CeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQNYF 63 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~~~ 63 (547)
++|+|||||++|+++|..|++. |++|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999977 9999999998664
No 307
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.30 E-value=0.00012 Score=84.59 Aligned_cols=90 Identities=14% Similarity=0.224 Sum_probs=69.0
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc-eEEEEecCCccC-------Cc--ccHHHHHHHHHHHHhC
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV-RITLIQSGDHIL-------NS--FDERISSFAEKKFQRD 258 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~il-------~~--~~~~~~~~~~~~l~~~ 258 (547)
..++|+|||||+.|+.+|..|++. +. +|+++++.+.+. |. ++....++..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--------------G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--------------GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--------------CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 467999999999999999999875 56 799999987653 22 3456667777889999
Q ss_pred CcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 259 GIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 259 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
||++++++.+.. +.+.+.+ +.. +.+|.||+|||.
T Consensus 252 gv~~~~~~~v~~---~~v~~~~---~~~--~~~d~vvlAtGa 285 (1025)
T 1gte_A 252 GVKIICGKSLSE---NEITLNT---LKE--EGYKAAFIGIGL 285 (1025)
T ss_dssp TCEEEESCCBST---TSBCHHH---HHH--TTCCEEEECCCC
T ss_pred CcEEEcccEecc---ceEEhhh---cCc--cCCCEEEEecCC
Confidence 999999987631 2333322 333 789999999996
No 308
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.30 E-value=0.0022 Score=67.96 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=68.8
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC----------------------------
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------------------- 240 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------------------- 240 (547)
....|+|||||++|+-+|..|++. +.+|+++|+.+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 76 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG--------------GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV 76 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc
Confidence 445899999999999999999875 45666666543210
Q ss_pred ----------------------Cc---c-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEecc-CCeEEEEee
Q 041537 241 ----------------------NS---F-DERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIKS-TGAVCSIPH 291 (547)
Q Consensus 241 ----------------------~~---~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~~-~G~~~~i~~ 291 (547)
|. + ...+.+.+.+.+++.|++|+.+++|++++. +++++...+ +| ..++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-~~~~~a 155 (499)
T 2qa2_A 77 ETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDG-PRSLTT 155 (499)
T ss_dssp CEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSC-EEEEEE
T ss_pred cccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCC-cEEEEe
Confidence 00 0 135666777778888999999999999853 455544321 23 235999
Q ss_pred ceEEEccCC
Q 041537 292 GLVLWSTGV 300 (547)
Q Consensus 292 D~vv~a~G~ 300 (547)
|.||-|.|.
T Consensus 156 ~~vVgADG~ 164 (499)
T 2qa2_A 156 RYVVGCDGG 164 (499)
T ss_dssp EEEEECCCT
T ss_pred CEEEEccCc
Confidence 999999995
No 309
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.27 E-value=0.0017 Score=70.18 Aligned_cols=94 Identities=20% Similarity=0.282 Sum_probs=66.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc-cC-----------------------Cc----
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH-IL-----------------------NS---- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~---- 242 (547)
..|+|||||+.|+++|..+++. +.+|.|+++.+. +. +.
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~ 87 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARG--------------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGK 87 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECccHHHHHHHHHHHHC--------------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHH
Confidence 4899999999999999999986 689999998741 10 00
Q ss_pred --------------------------cc-HHHHHHHHHHHHhC-CcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeec
Q 041537 243 --------------------------FD-ERISSFAEKKFQRD-GIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHG 292 (547)
Q Consensus 243 --------------------------~~-~~~~~~~~~~l~~~-GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D 292 (547)
.+ ..+...+.+.+++. ||+++. ..|+.+. ++.+......+|+. +.+|
T Consensus 88 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~--i~Ad 164 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRA--IQAK 164 (641)
T ss_dssp HHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCE--EEEE
T ss_pred HHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcE--EEeC
Confidence 01 13455666677774 999965 4788864 56665233345764 9999
Q ss_pred eEEEccCCC
Q 041537 293 LVLWSTGVG 301 (547)
Q Consensus 293 ~vv~a~G~~ 301 (547)
.||.|+|..
T Consensus 165 ~VVLATG~~ 173 (641)
T 3cp8_A 165 AAILACGTF 173 (641)
T ss_dssp EEEECCTTC
T ss_pred EEEECcCCC
Confidence 999999964
No 310
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.27 E-value=0.00013 Score=76.41 Aligned_cols=55 Identities=13% Similarity=0.031 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeC---CeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNVSD---KEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.++.+.+.+.+++.|+++++++.|++|.- +++....+.+|+. +.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcE--EECCEEEECCCcc
Confidence 37888888999999999999999999853 4454444445765 9999999999975
No 311
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.26 E-value=0.0013 Score=70.86 Aligned_cols=94 Identities=18% Similarity=0.297 Sum_probs=69.6
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC-------------------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL------------------------------- 240 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------------------------------- 240 (547)
.|+|||||++|+-+|..|++. +.+|+|||+.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~--------------G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAG--------------GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 899999999999999999875 67888888653210
Q ss_pred -----------------------C---cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEEec-cCCeEEEEe
Q 041537 241 -----------------------N---SF-DERISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMKIK-STGAVCSIP 290 (547)
Q Consensus 241 -----------------------~---~~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~ 290 (547)
+ .+ ...+.+.+.+.+++.||+|+.+++|++++. +++++... .+|+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~ 195 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVR 195 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEE
Confidence 0 01 234566777778888999999999999954 44554431 3452 2499
Q ss_pred eceEEEccCC
Q 041537 291 HGLVLWSTGV 300 (547)
Q Consensus 291 ~D~vv~a~G~ 300 (547)
+|.||.|.|.
T Consensus 196 a~~vV~ADG~ 205 (570)
T 3fmw_A 196 ARYGVGCDGG 205 (570)
T ss_dssp ESEEEECSCS
T ss_pred eCEEEEcCCC
Confidence 9999999994
No 312
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.25 E-value=0.003 Score=66.86 Aligned_cols=97 Identities=14% Similarity=0.241 Sum_probs=68.5
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC----------------------------
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL---------------------------- 240 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------------------- 240 (547)
....|+|||||++|+-+|..|++. +.+|+++|+.+.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 75 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLA--------------GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV 75 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc
Confidence 335899999999999999999875 45666666543210
Q ss_pred ----------------------Cc---c-cHHHHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCe-EEEEee
Q 041537 241 ----------------------NS---F-DERISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGA-VCSIPH 291 (547)
Q Consensus 241 ----------------------~~---~-~~~~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~-~~~i~~ 291 (547)
|. + ...+.+.+.+.+++.|++++.+++|++++ ++++++...+ ++ ..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~-~~g~~~~~a 154 (500)
T 2qa1_A 76 ETSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRG-PEGKHTLRA 154 (500)
T ss_dssp CBCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEE-TTEEEEEEE
T ss_pred cccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEc-CCCCEEEEe
Confidence 00 0 13456677777888899999999999985 4555544321 32 235999
Q ss_pred ceEEEccCC
Q 041537 292 GLVLWSTGV 300 (547)
Q Consensus 292 D~vv~a~G~ 300 (547)
|.||-|.|.
T Consensus 155 ~~vVgADG~ 163 (500)
T 2qa1_A 155 AYLVGCDGG 163 (500)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999995
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.23 E-value=0.00036 Score=73.85 Aligned_cols=95 Identities=23% Similarity=0.393 Sum_probs=66.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC----------cc---cHHHHHHHHHHHHh
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN----------SF---DERISSFAEKKFQR 257 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------~~---~~~~~~~~~~~l~~ 257 (547)
.+|+|||+|+.|+.+|..|.+. .+|+++++.+.+.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4899999999999999998752 58999999876521 11 122333333334 5
Q ss_pred CCcEEEcCceEEEEeCC--eEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 258 DGIEVLTECRVVNVSDK--EITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.||++++++.|.++..+ .+.+...++++..++.+|.+|+|+|..
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 69999999999887543 343332234554459999999999953
No 314
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.22 E-value=0.0018 Score=71.24 Aligned_cols=52 Identities=15% Similarity=0.264 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+...+.+.+++.|++++++++|+++. ++++.+.. .+|.. +.+|.||+|+|..
T Consensus 419 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~--i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 419 LTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNF-AGDQQ--ATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEE-CCCCE--EECCEEEECCCcc
Confidence 34445566678899999999999984 45666554 34554 9999999999964
No 315
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.22 E-value=0.00016 Score=76.36 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=36.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~~~~~~p 67 (547)
++++|+|||||++||++|+.|++.| .+|+|+|+++..++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 4579999999999999999999888 7999999998876543
No 316
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.21 E-value=0.00017 Score=72.89 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=32.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
|++|+|||||+||+.+|..|++.|++|+|||+++
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 4789999999999999999999999999999876
No 317
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.19 E-value=0.0035 Score=67.68 Aligned_cols=68 Identities=12% Similarity=0.292 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEe--C-CeEE-EEec-----cCCeE-------EEEeeceEEEccCCCCCcch-HH
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVS--D-KEIT-MKIK-----STGAV-------CSIPHGLVLWSTGVGTRPAI-KD 308 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~--~-~~v~-~~~~-----~~G~~-------~~i~~D~vv~a~G~~~~p~~-~~ 308 (547)
.+.+.+.+.+++.||+|+++++|+++. + +.+. +... .+|+. .++.+|.||.|.|. ...+ ..
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~--~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC--HGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC--CchHHHH
Confidence 556677888888999999999999985 2 2343 3221 13421 24999999999995 3333 34
Q ss_pred HHHHhCC
Q 041537 309 FMEQIGQ 315 (547)
Q Consensus 309 l~~~~~~ 315 (547)
+....++
T Consensus 223 l~~~~gl 229 (584)
T 2gmh_A 223 LYKKFDL 229 (584)
T ss_dssp HHHHTTT
T ss_pred HHHHhCC
Confidence 4444454
No 318
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.18 E-value=0.00093 Score=73.56 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=63.5
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEE-------------------------------------EcCCCCCccCCCh
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQV-------------------------------------VSPQNYFAFTPLL 69 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtl-------------------------------------id~~~~~~~~p~l 69 (547)
..++|+|||||+.|+.+|..|++.|.+|++ +++.+..
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~------ 566 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASK------ 566 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSC------
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchh------
Confidence 357999999999999999999987765543 3222110
Q ss_pred hhhhccccCccccchhHHHHHHhCCCcEEEE-EEEEEEEECCCCEEEE-ecCCCCCCceeeeecCEEEEccCCCccC
Q 041537 70 PSVTCGTVEARSIAEPVRNIIKKRNAEIQFW-EAEAIKIDAAKNEVFC-KSNIDKETRDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 70 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~id~~~~~v~~-~~~~~~g~~~~~i~yD~LViAtG~~~~~ 144 (547)
....+. ......+...+++.+ |+++ ..+++.++.+ .+.+ .+ |+ ..++++|.+|+|+|.+|+.
T Consensus 567 ---l~~~l~-~~~~~~~~~~l~~~G--V~v~~~~~v~~i~~~--~v~~~~~----G~-~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 567 ---PGQGLG-KTTGWIHRTTLLSRG--VKMIPGVSYQKIDDD--GLHVVIN----GE-TQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp ---TTTTSC-TTTHHHHHHHHHHTT--CEEECSCEEEEEETT--EEEEEET----TE-EEEECCSEEEECCCEEECC
T ss_pred ---hccccc-cccHHHHHHHHHhcC--CEEEeCcEEEEEeCC--eEEEecC----Ce-EEEEeCCEEEECCCccccH
Confidence 000011 122234566777788 4444 4578888854 4555 33 42 2489999999999998864
No 319
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.18 E-value=0.00011 Score=73.94 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.6
Q ss_pred CeEEEECCchHHHHHHHhcCCCC------CeEEEEcCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSS------YDVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g------~~Vtlid~~~ 61 (547)
+||+|||||++|+++|++|++.| .+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999877 9999999975
No 320
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.15 E-value=0.0027 Score=67.35 Aligned_cols=54 Identities=17% Similarity=0.122 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC---Ce---EEEEeccCCeEEEEeec-eEEEccCCC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSD---KE---ITMKIKSTGAVCSIPHG-LVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~~---v~~~~~~~G~~~~i~~D-~vv~a~G~~ 301 (547)
.+.+.+.+.+++.||+|+++++|+++.. +. |.+.. +|+..++.+| .||+|+|-.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCCh
Confidence 4556667777889999999999999852 33 34433 4655569996 999999953
No 321
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.14 E-value=0.00025 Score=73.83 Aligned_cols=41 Identities=22% Similarity=0.305 Sum_probs=37.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTP 67 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p 67 (547)
..++|+|||||++|+++|..|++.|++|+|+|++++.++..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 35799999999999999999999999999999998877654
No 322
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.14 E-value=0.00029 Score=77.46 Aligned_cols=42 Identities=17% Similarity=0.414 Sum_probs=37.5
Q ss_pred CCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 25 EREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 25 ~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
....++|+|||||++||++|..|.+.|++|+|+|+++..++.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 345689999999999999999999999999999999887653
No 323
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.11 E-value=0.0005 Score=76.39 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=67.7
Q ss_pred CCeEEEEC--CchHHHHHHHhcCCCCCeEEEEcCCCCCccCCChhhhhccccCccccchhHHHHHHhCCCcEEEEEEEEE
Q 041537 28 KKRVVLLG--TGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAI 105 (547)
Q Consensus 28 ~~~VvIIG--gG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 105 (547)
.++|+||| ||+.|+.+|..|++.|.+|+||++.+ +. ..... . .. ...+.+.+++.++++. ...+++
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~-----~~~~~---~-~~-~~~~~~~l~~~GV~i~-~~~~v~ 595 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA-----NYMHF---T-LE-YPNMMRRLHELHVEEL-GDHFCS 595 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT-----HHHHH---T-TC-HHHHHHHHHHTTCEEE-CSEEEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc-----ccccc---c-cc-HHHHHHHHHhCCCEEE-cCcEEE
Confidence 56999999 99999999999999999999999876 21 11000 0 01 2345666777884442 345788
Q ss_pred EEECCCCEEEEecCCCCCC----------------ceeeeecCEEEEccCCCccC
Q 041537 106 KIDAAKNEVFCKSNIDKET----------------RDFSLEYDYLIIAVGAQVNT 144 (547)
Q Consensus 106 ~id~~~~~v~~~~~~~~g~----------------~~~~i~yD~LViAtG~~~~~ 144 (547)
.|+.+. +.+.....++. .++++++|.||+|+|..|+.
T Consensus 596 ~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 596 RIEPGR--MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEETTE--EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEECCe--EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 888653 33321110011 12249999999999998754
No 324
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.11 E-value=0.00031 Score=78.86 Aligned_cols=41 Identities=17% Similarity=0.425 Sum_probs=37.1
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
...++|+|||||++||+||+.|++.|++|+|+|+++..++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 45689999999999999999999999999999999887653
No 325
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.09 E-value=0.0014 Score=67.14 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=63.1
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-----c--c-c---HH----------H--
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN-----S--F-D---ER----------I-- 247 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-----~--~-~---~~----------~-- 247 (547)
.+|+|||||++|+.+|..|++. +.+|+|+++.+.+.. . + + .. +
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQN--------------GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 4899999999999999999864 689999998764321 0 0 0 00 0
Q ss_pred ----------------------------------HHHHHHHHHhC--CcEEEcCceEEEEeC--CeEEEEeccCCeEEEE
Q 041537 248 ----------------------------------SSFAEKKFQRD--GIEVLTECRVVNVSD--KEITMKIKSTGAVCSI 289 (547)
Q Consensus 248 ----------------------------------~~~~~~~l~~~--GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i 289 (547)
...+.+.|.+. +++++++++|++++. +++.+.. .+|++ +
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~ 169 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTF-ENKPS--E 169 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEE-TTSCC--E
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEE-CCCcE--E
Confidence 01122223221 367889999999853 4465554 34654 9
Q ss_pred eeceEEEccCCC
Q 041537 290 PHGLVLWSTGVG 301 (547)
Q Consensus 290 ~~D~vv~a~G~~ 301 (547)
.+|.||.|.|..
T Consensus 170 ~ad~vV~AdG~~ 181 (398)
T 2xdo_A 170 TADLVILANGGM 181 (398)
T ss_dssp EESEEEECSCTT
T ss_pred ecCEEEECCCcc
Confidence 999999999963
No 326
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.06 E-value=0.0016 Score=74.58 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=68.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc--------c----cHHHHHHHHHHHHhC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS--------F----DERISSFAEKKFQRD 258 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--------~----~~~~~~~~~~~l~~~ 258 (547)
.+|+|||+|+.|+.+|..+.+. +.+|+|++..+.+... + +.++.....+.+.+.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~--------------G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~ 194 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRS--------------GARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEA 194 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHS
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhc
Confidence 4899999999999999999875 6899999998754211 1 234445555667775
Q ss_pred -CcEEEcCceEEEEeCCe-EEEEe-cc------------CCeEEEEeeceEEEccCCC
Q 041537 259 -GIEVLTECRVVNVSDKE-ITMKI-KS------------TGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 259 -GV~v~~~~~V~~v~~~~-v~~~~-~~------------~G~~~~i~~D~vv~a~G~~ 301 (547)
+|++++++.|..+..+. +.... .. +++..++.+|.||+|||..
T Consensus 195 ~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 195 EETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp TTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred CCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 99999999999987543 21111 00 0222258999999999963
No 327
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.99 E-value=0.0033 Score=65.72 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.++|+|+|+|--|.+.|..|...|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999853
No 328
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.96 E-value=0.0015 Score=66.63 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=30.2
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
++|+|||||++|+-+|..|++. +++|+|+|+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--------------G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--------------GIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--------------CCCEEEEecCCCC
Confidence 4899999999999999999975 7899999876543
No 329
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.94 E-value=0.0004 Score=77.39 Aligned_cols=40 Identities=23% Similarity=0.361 Sum_probs=36.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCcc
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAF 65 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~ 65 (547)
...++|+|||||++|+++|..|++.|++|+|+|+++..++
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 4468999999999999999999999999999999887665
No 330
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.92 E-value=0.0034 Score=68.62 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCc--EEEcCceEEEEeCC------eEEEEec-----cCCeEEEEeeceEEEccCC
Q 041537 246 RISSFAEKKFQRDGI--EVLTECRVVNVSDK------EITMKIK-----STGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV--~v~~~~~V~~v~~~------~v~~~~~-----~~G~~~~i~~D~vv~a~G~ 300 (547)
.+.+.+.+.+++.|+ +|+.+++|++++.+ .+.+... .+|+..++.+|.||-|.|.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~ 209 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGA 209 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCc
Confidence 566778888888887 99999999998532 3554422 2464446999999999995
No 331
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.90 E-value=0.0043 Score=65.67 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc-------CCc----------------------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI-------LNS---------------------- 242 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i-------l~~---------------------- 242 (547)
-|+|||+||+|+-+|..|.+.....+..............++++.+.+ +|.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 699999999999999999876432211111111223455666665421 110
Q ss_pred ----------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEeC---C---------eEEEEeccCCeEEE
Q 041537 243 ----------------------FDERISSFAEKKFQRDGIEVLTECRVVNVSD---K---------EITMKIKSTGAVCS 288 (547)
Q Consensus 243 ----------------------~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~---~---------~v~~~~~~~G~~~~ 288 (547)
.-.++.+|+....++.+..++++++|++|+. + .|+..+..+|+..+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0135667777777788888999999999952 1 14455545566667
Q ss_pred EeeceEEEccCCCCCcch
Q 041537 289 IPHGLVLWSTGVGTRPAI 306 (547)
Q Consensus 289 i~~D~vv~a~G~~~~p~~ 306 (547)
+.|+.||+|+|. .|.+
T Consensus 201 ~~ar~vVlatG~--~P~i 216 (501)
T 4b63_A 201 RRTRKVVIAIGG--TAKM 216 (501)
T ss_dssp EEEEEEEECCCC--EECC
T ss_pred EEeCEEEECcCC--CCCC
Confidence 999999999994 4543
No 332
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.90 E-value=0.00048 Score=72.38 Aligned_cols=40 Identities=25% Similarity=0.389 Sum_probs=35.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCCCCccCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQNYFAFTP 67 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~~~~~~p 67 (547)
.++|+|||||++||++|..|++.|+ +|+|+|+++..++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 5789999999999999999999998 899999998776543
No 333
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.90 E-value=0.0073 Score=62.45 Aligned_cols=54 Identities=19% Similarity=0.308 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhCCcEEEcCc---eEEEEe--CCeEEEEeccCCeEEEEeeceEEEccCCC
Q 041537 246 RISSFAEKKFQRDGIEVLTEC---RVVNVS--DKEITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~---~V~~v~--~~~v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+...+.+.+++.|++|++++ +|+++. ++.++...+.+|+. +.+|.||+|+|..
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~--i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKI--WRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEE--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCE--EECCEEEECCCCC
Confidence 566677778888999999999 999984 55666233355754 9999999999953
No 334
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.90 E-value=0.004 Score=63.92 Aligned_cols=50 Identities=16% Similarity=0.258 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCcEEEcCceEE---------EEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVV---------NVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~---------~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
+...+.+.+++.|++++++++|+ ++.. +.+.+.. .+| ++.+|.||.|+|.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~-~~g---~i~a~~VV~A~G~ 234 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVH-ETR---QIRAGVIIVAAGA 234 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CB-CCE---EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEE-CCc---EEECCEEEECCCc
Confidence 55667777888999999999999 7753 3343322 234 3999999999994
No 335
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.88 E-value=0.00058 Score=73.10 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=32.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
..+|||||||+|||++|..|++ |.+|+|||+.+..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998653
No 336
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.85 E-value=0.0082 Score=64.99 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCC-cEEEcCceEEEEe--CCe---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDG-IEVLTECRVVNVS--DKE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~G-V~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+...+.+.+++.| |+++.++.|+++. ++. +.+.+..+|+...+.++.||+|+|..
T Consensus 136 l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 136 MLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 3444555566678 9999999999884 443 33444456775569999999999963
No 337
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.82 E-value=0.0013 Score=66.97 Aligned_cols=86 Identities=21% Similarity=0.371 Sum_probs=63.9
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc----------------------C-C-------
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI----------------------L-N------- 241 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i----------------------l-~------- 241 (547)
+|+|||||++|+.+|..|++.. ++.+|+++|+.+.+ . .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~------------~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR------------PLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNP 69 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCC
T ss_pred eEEEECCCHHHHHHHHHHHhcC------------CCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhh
Confidence 7999999999999999998751 24677777765432 0 0
Q ss_pred -------------------------cccHHHHHHHHHHHHhCCcEEEcCceEEEEeCCeEEEEeccCCeEEEEeeceEEE
Q 041537 242 -------------------------SFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLW 296 (547)
Q Consensus 242 -------------------------~~~~~~~~~~~~~l~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vv~ 296 (547)
.....+.+.+.+.+++.||+++++++|++++.. . ++.+|.||.
T Consensus 70 ~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~---------~---~~~ad~vV~ 137 (381)
T 3c4a_A 70 QFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL---------P---LADYDLVVL 137 (381)
T ss_dssp EEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC---------C---GGGCSEEEE
T ss_pred ccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc---------c---cccCCEEEE
Confidence 012456777888888889999999999877642 1 168999999
Q ss_pred ccCCC
Q 041537 297 STGVG 301 (547)
Q Consensus 297 a~G~~ 301 (547)
|.|..
T Consensus 138 AdG~~ 142 (381)
T 3c4a_A 138 ANGVN 142 (381)
T ss_dssp CCGGG
T ss_pred CCCCC
Confidence 99963
No 338
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.79 E-value=0.00065 Score=74.32 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=32.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..||||||||.|||+||..|++.|++|+|||+.+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 46999999999999999999999999999999653
No 339
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.74 E-value=0.00058 Score=74.19 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=32.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...+|||||||.|||+||..|++.|++|+|||+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 35799999999999999999999999999999964
No 340
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.72 E-value=0.022 Score=56.35 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=83.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS---------------------------- 242 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------------------------- 242 (547)
..|+|||+|++|+.+|..|++.. ++.+|+++++.+.+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc
Confidence 38999999999999999998751 25789999986543210
Q ss_pred ----------ccHHHHHHHHHHHHhC-CcEEEcCceEEEEeC------C--eEE---EEec---cCC------eEEEEee
Q 041537 243 ----------FDERISSFAEKKFQRD-GIEVLTECRVVNVSD------K--EIT---MKIK---STG------AVCSIPH 291 (547)
Q Consensus 243 ----------~~~~~~~~~~~~l~~~-GV~v~~~~~V~~v~~------~--~v~---~~~~---~~G------~~~~i~~ 291 (547)
....+...+.+.+.+. ||+++.++.|+++.. + .|. +... .+| +..++.+
T Consensus 134 ~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A 213 (326)
T 2gjc_A 134 EDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIEL 213 (326)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEE
T ss_pred ccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEE
Confidence 1233445566666664 999999999998842 2 332 2210 112 2234899
Q ss_pred ---------------ceEEEccCCCCCcchHHHHHHh---CCCC--Cc----------cEEeCCCCCcCCCCCEEEeCcc
Q 041537 292 ---------------GLVLWSTGVGTRPAIKDFMEQI---GQGK--RR----------VLATNEWLRVKECENVYALGDC 341 (547)
Q Consensus 292 ---------------D~vv~a~G~~~~p~~~~l~~~~---~~~~--~g----------~i~Vd~~l~~~~~~~VfaiGD~ 341 (547)
+.||.|+|-. .|....+...+ +... .| ...|+.+-...-+|++|+.|-.
T Consensus 214 ~G~~~~~~~~~~~~~~~VV~ATG~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~ 292 (326)
T 2gjc_A 214 AGYKNDGTRDLSQKHGVILSTTGHD-GPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGME 292 (326)
T ss_dssp SCCCSSSCCCSSTTCCEEEECCCCC---CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHH
T ss_pred eeccccccccccccCCEEEECcCCC-chHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChH
Confidence 9999999963 34443333322 2211 01 1122222221257999999987
Q ss_pred Cc
Q 041537 342 AT 343 (547)
Q Consensus 342 a~ 343 (547)
+.
T Consensus 293 ~~ 294 (326)
T 2gjc_A 293 VA 294 (326)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 341
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.72 E-value=0.0072 Score=64.53 Aligned_cols=51 Identities=18% Similarity=0.356 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEeC--Ce-E-EEEeccCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVSD--KE-I-TMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~-v-~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+.+.+.+.+++.||+++.+ +|++++. ++ + .+. ..+|+. +.+|.||.|+|..
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~-~~~g~~--i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLL-TKEGRT--LEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE-ETTSCE--ECCSEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEE-ECCCcE--EEeCEEEECCCCc
Confidence 3345566667789999999 8998853 32 2 333 245654 9999999999963
No 342
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.72 E-value=0.007 Score=64.80 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEeC--CeEEEE--eccCCeEEEEeeceEEEccCC
Q 041537 246 RISSFAEKKFQRDGIEVLTECRVVNVSD--KEITMK--IKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 246 ~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~v~~~--~~~~G~~~~i~~D~vv~a~G~ 300 (547)
.+.+.+.+.+++. ++++++|++++. +++++. +..+|+..++.+|.||-|.|.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGA 194 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCC
Confidence 3455566666665 889999999853 455443 322364446999999999995
No 343
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.68 E-value=0.014 Score=58.10 Aligned_cols=138 Identities=16% Similarity=0.147 Sum_probs=84.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCC-----------------------------
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILN----------------------------- 241 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------------------------- 241 (547)
..|+|||||+.|+-+|..|++.. ++.+|+|+++.+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc
Confidence 48999999999999999998751 2578999998764320
Q ss_pred ---------cccHHHHHHHHHHHHh-CCcEEEcCceEEEEe--C-----------------C--e---EEEEec---cCC
Q 041537 242 ---------SFDERISSFAEKKFQR-DGIEVLTECRVVNVS--D-----------------K--E---ITMKIK---STG 284 (547)
Q Consensus 242 ---------~~~~~~~~~~~~~l~~-~GV~v~~~~~V~~v~--~-----------------~--~---v~~~~~---~~G 284 (547)
.....+.+.+.+.+++ .||+++.++.++++. + + . +++... .+|
T Consensus 148 ~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g 227 (344)
T 3jsk_A 148 EDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHH 227 (344)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTS
T ss_pred cccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccC
Confidence 0022344556666677 599999999998873 2 1 2 222210 112
Q ss_pred ------eEEEEeeceEEEccCCCCCcchHHH---HHHhCCCC--Ccc----------EEeCCCCCcCCCCCEEEeCccCc
Q 041537 285 ------AVCSIPHGLVLWSTGVGTRPAIKDF---MEQIGQGK--RRV----------LATNEWLRVKECENVYALGDCAT 343 (547)
Q Consensus 285 ------~~~~i~~D~vv~a~G~~~~p~~~~l---~~~~~~~~--~g~----------i~Vd~~l~~~~~~~VfaiGD~a~ 343 (547)
+..++.++.||.|+|.. .+....+ +.++++.. .|. ..|+.+-++ +|++|+.|=.++
T Consensus 228 ~~~~~~d~~~i~Ak~VV~ATG~~-s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~ 304 (344)
T 3jsk_A 228 DDQSAMDPNTINAPVIISTTGHD-GPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELS 304 (344)
T ss_dssp SSSSCCBCEEEECSEEEECCCSS-SSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHH
T ss_pred CcccccCceEEEcCEEEECCCCC-chhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhH
Confidence 22459999999999953 2332222 23344421 111 112222222 699999998765
No 344
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.62 E-value=0.001 Score=72.79 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCeEEEECCchHHHHHHHhcC---C-CCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLD---V-SSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~---~-~g~~Vtlid~~~ 61 (547)
..||||||||+|||+||..|+ + .|.+|+||||.+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 479999999999999999999 6 899999999975
No 345
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.53 E-value=0.00071 Score=74.10 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=33.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCC--------CeEEEEcCCC-CC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSS--------YDVQVVSPQN-YF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g--------~~Vtlid~~~-~~ 63 (547)
+++|+|||||++||+||+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 578999999999999999998777 9999999998 76
No 346
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.38 E-value=0.0016 Score=69.73 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..+++||||||++|+.+|.+|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999864
No 347
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.34 E-value=0.019 Score=60.19 Aligned_cols=52 Identities=23% Similarity=0.266 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--CCeEEEE-eccCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVS--DKEITMK-IKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~v~~~-~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+.+.+.+.+++.||+++.++.| ++. ++.+... ...++.. +.+|.||+|+|..
T Consensus 121 l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~--~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 121 IFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV--EDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEE--CCCSEEEECCCCC
T ss_pred HHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCe--EEeeeEEECCCCC
Confidence 3455556667789999999999 883 4444211 1111222 7799999999953
No 348
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.27 E-value=0.0025 Score=67.78 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~~ 62 (547)
..+|+||||||+||+.+|.+|++ .+++|+|+|+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36899999999999999999996 7899999998754
No 349
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.25 E-value=0.032 Score=59.66 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhC-CcEEEcCceEEEEeC--Ce--EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 246 RISSFAEKKFQRD-GIEVLTECRVVNVSD--KE--ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 246 ~~~~~~~~~l~~~-GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
.+.+.+.+.+++. ||+++.+ +|++++. ++ +.+. ..+|+. +.+|.||.|+|..
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~-~~~G~~--i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVR-TATGRV--FDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEE-ETTSCE--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEE-ECCCCE--EECCEEEECCCCc
Confidence 4556667777777 9999999 9999852 33 3333 345654 9999999999963
No 350
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.00 E-value=0.0049 Score=53.00 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=33.2
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+...+.+|+|+|.|.-|...|..|.+.|++|++||++
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3445678999999999999999999999999999986
No 351
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.94 E-value=0.0037 Score=66.77 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=32.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..+|+||||||.||+.+|.+|++ |.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35799999999999999999999 999999999865
No 352
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.88 E-value=0.0052 Score=53.87 Aligned_cols=39 Identities=26% Similarity=0.332 Sum_probs=32.8
Q ss_pred CCCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 23 EKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 23 ~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+.....++|+|+|+|.-|..+|..|...|++|+++|+++
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 444456799999999999999999998999999999874
No 353
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.87 E-value=0.0059 Score=65.66 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~~ 62 (547)
..+|+||||||.||+.+|.+|++.+ ++|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3589999999999999999999876 79999999865
No 354
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.83 E-value=0.058 Score=58.42 Aligned_cols=54 Identities=11% Similarity=0.023 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEe--CCe---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 248 SSFAEKKFQRDGIEVLTECRVVNVS--DKE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 248 ~~~~~~~l~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
...+.+.+++.||+++.++.|+++. ++. +.+.+..+|+...+.++.||+|+|-.
T Consensus 158 ~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 158 LHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 3344445566799999999999884 443 34444345765569999999999963
No 355
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.77 E-value=0.053 Score=59.36 Aligned_cols=20 Identities=40% Similarity=0.702 Sum_probs=19.3
Q ss_pred cEEEEcCChhHHHHHHHHHH
Q 041537 192 HFVIVGGGPTGVEFAAELHD 211 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~ 211 (547)
.|+|||||++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 79999999999999999998
No 356
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.71 E-value=0.062 Score=58.65 Aligned_cols=55 Identities=13% Similarity=0.097 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEe--CCe---EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 247 ISSFAEKKFQRDGIEVLTECRVVNVS--DKE---ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 247 ~~~~~~~~l~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
+...+.+.+++.||+|+.++.|+++. ++. +.+.+..+|+...+.++.||+|+|-.
T Consensus 160 l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 160 MLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 33444555667799999999999883 443 44444356775569999999999953
No 357
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.64 E-value=0.055 Score=57.10 Aligned_cols=53 Identities=13% Similarity=0.224 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEeC--Ce--EEEEeccCCeEEEEeeceEEEccCCC
Q 041537 245 ERISSFAEKKFQRDGIEVLTECRVVNVSD--KE--ITMKIKSTGAVCSIPHGLVLWSTGVG 301 (547)
Q Consensus 245 ~~~~~~~~~~l~~~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vv~a~G~~ 301 (547)
..+.+.+.+.+++.||+++.+ +|++++. ++ +.+.. .+|+. +.+|.||.|+|..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~-~~g~~--~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT-KQHGE--ISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE-SSSCE--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE-CCCCE--EEcCEEEECCCcc
Confidence 345566677778889999999 8999863 33 33333 44754 9999999999963
No 358
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.56 E-value=0.0059 Score=64.67 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=33.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCc
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFA 64 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~ 64 (547)
.++++|||+|++|+.+|..|++.|.+|+|||+...+.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999987544
No 359
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.54 E-value=0.0069 Score=64.18 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=33.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~ 63 (547)
..++++|||+|++|+.+|..|++.|.+|+|||+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4589999999999999999999999999999998653
No 360
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.50 E-value=0.019 Score=59.76 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|.|||.|.+|+++|+.|.+.|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 46899999999999999999999999999999875
No 361
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.49 E-value=0.0093 Score=64.12 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~ 61 (547)
..+|+||||||.||+.+|.+|++ .+++|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999995 689999999987
No 362
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.40 E-value=0.01 Score=51.72 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
.+++|+|+|+|..|...+..|...|++|++||++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3568999999999999999999899999999986
No 363
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.34 E-value=0.012 Score=55.35 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=31.1
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
.|+||||||+|+-+|..|++. +.+|+|+|+.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--------------G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCC
Confidence 699999999999999999986 7899999998765
No 364
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.34 E-value=0.041 Score=58.62 Aligned_cols=49 Identities=20% Similarity=0.168 Sum_probs=34.8
Q ss_pred HHHh-CCcEEEcCceEEEEe--C-C------e---EEEEeccCCeEEEEeeceEEEccCCCC
Q 041537 254 KFQR-DGIEVLTECRVVNVS--D-K------E---ITMKIKSTGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 254 ~l~~-~GV~v~~~~~V~~v~--~-~------~---v~~~~~~~G~~~~i~~D~vv~a~G~~~ 302 (547)
.+++ .||++++++.|+++. + + . +.+.+..+|+...+.++.||+|+|-..
T Consensus 147 ~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 147 KALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp HHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3455 699999999999984 2 3 3 334432357655699999999999643
No 365
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.32 E-value=0.0076 Score=64.61 Aligned_cols=36 Identities=22% Similarity=0.157 Sum_probs=32.7
Q ss_pred CCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQNYF 63 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~~~ 63 (547)
.+|+||||||.||+.+|.+|++ .+++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4799999999999999999997 79999999998654
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.27 E-value=0.01 Score=50.91 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
.+++|+|+|+|.-|..+|..|.+.|++|+++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3568999999999999999999999999999985
No 367
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.27 E-value=0.01 Score=64.01 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=34.0
Q ss_pred CCCCeEEEECCchHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDV-SSYDVQVVSPQNYF 63 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~-~g~~Vtlid~~~~~ 63 (547)
+..++++|||+|++|+.+|..|++ .+.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 345899999999999999999998 89999999998654
No 368
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.25 E-value=0.013 Score=62.76 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC-CCeEEEEcCCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS-SYDVQVVSPQNYF 63 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~-g~~Vtlid~~~~~ 63 (547)
..++++|||+|.+|+.+|.+|++. +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999986 8999999998653
No 369
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.24 E-value=0.01 Score=48.70 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~ 60 (547)
+++|+|+|+|..|..++..|...| ++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 568999999999999999999888 999999986
No 370
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.17 E-value=0.032 Score=55.36 Aligned_cols=36 Identities=14% Similarity=0.256 Sum_probs=31.8
Q ss_pred CCCeEEEECCchHHHH-HHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGIS-FLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~-aA~~L~~~g~~Vtlid~~~~ 62 (547)
.+++|.|||.|-+|++ +|+.|.+.|++|++.|.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3678999999999997 78889999999999998753
No 371
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.08 E-value=0.013 Score=49.68 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
.++|+|||+|..|...|..|.+.|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 358999999999999999999889999999975
No 372
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.79 E-value=0.2 Score=55.70 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=30.9
Q ss_pred CCcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccC
Q 041537 258 DGIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 258 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
.|++|++++.|++|+. +++.+.. .+|+. +.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~-~~G~~--i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTT-TDGTG--YSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEE-TTCCE--EEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 4789999999999964 4577664 44654 99999999985
No 373
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.34 E-value=0.16 Score=55.36 Aligned_cols=51 Identities=10% Similarity=0.082 Sum_probs=35.1
Q ss_pred HHHHHhC-Cc-EEEcCceEEEEe--CC---eEE---EEeccCCeEEEEeeceEEEccCCCC
Q 041537 252 EKKFQRD-GI-EVLTECRVVNVS--DK---EIT---MKIKSTGAVCSIPHGLVLWSTGVGT 302 (547)
Q Consensus 252 ~~~l~~~-GV-~v~~~~~V~~v~--~~---~v~---~~~~~~G~~~~i~~D~vv~a~G~~~ 302 (547)
.+.+++. || +++.++.|+++. ++ .+. +.+..+|+...+.++.||+|+|-..
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 3344455 89 999999999884 34 443 3333456655689999999999643
No 374
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.27 E-value=0.032 Score=51.96 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=32.3
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
...++|+|||||-.|...+..|.+.|.+|+||+++
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 45689999999999999999999999999999975
No 375
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.20 E-value=0.022 Score=48.51 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+++|+|+|+|..|..+|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999889999999976
No 376
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.09 E-value=0.035 Score=54.36 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=32.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.+++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999874
No 377
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.90 E-value=0.039 Score=59.62 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=36.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCCCccC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFT 66 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~~~~~ 66 (547)
+.+||+|||+|..|..+|..|++.|.+|.+||++++++..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 3689999999999999999999999999999999998664
No 378
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.71 E-value=0.043 Score=51.43 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCCCCCCeEEEEC-CchHHHHHHHhcCCCC-CeEEEEcCCC
Q 041537 23 EKEREKKRVVLLG-TGWAGISFLKDLDVSS-YDVQVVSPQN 61 (547)
Q Consensus 23 ~~~~~~~~VvIIG-gG~aGl~aA~~L~~~g-~~Vtlid~~~ 61 (547)
...+++++|+|.| +|.-|..++..|.+.| ++|++++|+.
T Consensus 18 ~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred eecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 4456678999999 5999999999999999 8999999874
No 379
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=93.65 E-value=0.043 Score=54.26 Aligned_cols=67 Identities=21% Similarity=0.198 Sum_probs=46.5
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCc-------cc-HHHHHHHHHHHHhCCcEE
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNS-------FD-ERISSFAEKKFQRDGIEV 262 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-------~~-~~~~~~~~~~l~~~GV~v 262 (547)
..|+|||+||.|+-+|..|+.. +.+.+|+++++.+.+... ++ ..+.+.+.+.+++.||++
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~------------r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~ 133 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN------------RPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH------------CTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHh------------CCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEE
Confidence 4799999999999999999764 137899999998764321 11 112223445677889988
Q ss_pred EcCceEE
Q 041537 263 LTECRVV 269 (547)
Q Consensus 263 ~~~~~V~ 269 (547)
..+....
T Consensus 134 ~~~~~~~ 140 (326)
T 3fpz_A 134 EDEGDYV 140 (326)
T ss_dssp EECSSEE
T ss_pred EECCcce
Confidence 7765443
No 380
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.63 E-value=0.038 Score=49.58 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=31.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC-CCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS-SYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~-g~~Vtlid~~ 60 (547)
...+|+|+|+|..|..+|..|.+. |++|+++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 356899999999999999999988 9999999986
No 381
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.22 E-value=0.035 Score=53.38 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=32.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|+|||||-.|...+..|.+.|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46799999999999999999999999999999753
No 382
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.19 E-value=0.058 Score=55.49 Aligned_cols=39 Identities=13% Similarity=0.202 Sum_probs=35.0
Q ss_pred CCCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 23 EKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 23 ~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
|..+.|.+|.|||.|+.||.+|..|++.|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 455678899999999999999999999999999999764
No 383
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.94 E-value=0.091 Score=45.04 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
.++|+|||+|..|...+..|...|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 578999999999999999999999999999986
No 384
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.92 E-value=0.052 Score=56.23 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.++|+|||.|.+|+++|+.|.+.|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 46899999999999999999999999999998764
No 385
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.88 E-value=0.2 Score=52.00 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=54.0
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceE
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRV 268 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V 268 (547)
.+++|.|||.|.+|+-+|..|.+. +.+|++.+..+... + ...+.|++.||+++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~--------------G~~V~~~D~~~~~~---~-----~~~~~L~~~gi~~~~g~~~ 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL--------------GAIVTVNDGKPFDE---N-----PTAQSLLEEGIKVVCGSHP 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT--------------TCEEEEEESSCGGG---C-----HHHHHHHHTTCEEEESCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--------------CCEEEEEeCCcccC---C-----hHHHHHHhCCCEEEECCCh
Confidence 457999999999999988888765 78999999875311 1 1235778899999877531
Q ss_pred EEEeCCeEEEEeccCCeEEEEe-eceEEEccCCC
Q 041537 269 VNVSDKEITMKIKSTGAVCSIP-HGLVLWSTGVG 301 (547)
Q Consensus 269 ~~v~~~~v~~~~~~~G~~~~i~-~D~vv~a~G~~ 301 (547)
.+. .-. +|.||.++|+.
T Consensus 66 ---------------~~~-~~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 66 ---------------LEL-LDEDFCYMIKNPGIP 83 (451)
T ss_dssp ---------------GGG-GGSCEEEEEECTTSC
T ss_pred ---------------HHh-hcCCCCEEEECCcCC
Confidence 010 012 79999999984
No 386
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.82 E-value=0.059 Score=56.59 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=29.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL 240 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il 240 (547)
|+|+|||+|..|+-+|..|++. +.+|+++|+.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~--------------G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA--------------GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--------------TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCcEEEEccCCCCC
Confidence 5899999999999999999875 78999999988764
No 387
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.61 E-value=0.058 Score=49.93 Aligned_cols=31 Identities=13% Similarity=0.360 Sum_probs=29.6
Q ss_pred eEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 30 RVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 30 ~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+|+|+|+|.-|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999976
No 388
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.50 E-value=0.08 Score=50.91 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=31.3
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|+|.|+|+-|-.++..|.+.|++|++++|++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999999863
No 389
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.42 E-value=0.09 Score=50.89 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35789999999999999999999999999999874
No 390
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.39 E-value=0.073 Score=49.68 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=31.4
Q ss_pred CCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.+.++|+|.|| |+-|..++..|.+.|++|++++|+.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 45678999998 9999999999999999999999863
No 391
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.24 E-value=0.11 Score=55.96 Aligned_cols=34 Identities=26% Similarity=0.466 Sum_probs=30.3
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH 238 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 238 (547)
..|+|||||++|+-+|..|++. +.+|+|+++.+.
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~--------------G~~V~LiEr~~~ 57 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL--------------GHDVTIYERSAF 57 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHcC--------------CCCEEEEcCCCC
Confidence 4899999999999999999875 789999999853
No 392
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.20 E-value=0.087 Score=52.87 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=32.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
|++|+|||||.-|..+++.+++.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 68999999999999999999999999999998764
No 393
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.14 E-value=0.096 Score=53.12 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
...+|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 457999999999999999999999999999998753
No 394
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.11 E-value=0.091 Score=50.58 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
++++|+|.|+|+-|-.++..|.+.|++|++++++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 356899999999999999999999999999998743
No 395
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=92.00 E-value=0.068 Score=56.70 Aligned_cols=45 Identities=33% Similarity=0.330 Sum_probs=30.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD 237 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 237 (547)
.+|+|||||++|.-+|..|++..... ..-+.-..+.+|+|||+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~--~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVD--KGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEE--TTEECSSCSCEEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccc--cccccCCCCCeEEEEeCCC
Confidence 48999999999999999999843100 0000000278999999865
No 396
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.98 E-value=0.094 Score=51.72 Aligned_cols=32 Identities=28% Similarity=0.290 Sum_probs=30.3
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
++|.|||+|.-|...|..|.+.|++|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 58999999999999999999999999999986
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.96 E-value=0.43 Score=47.10 Aligned_cols=72 Identities=14% Similarity=0.090 Sum_probs=51.4
Q ss_pred cccEEEEcCChhHHH-HHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceE
Q 041537 190 NLHFVIVGGGPTGVE-FAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRV 268 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V 268 (547)
.++|.|||.|.+|+. +|..|.+. +.+|++.+..+.. . ..+.|++.||+++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--------------G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--------------GFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--------------TCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--------------CCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCH
Confidence 358999999999997 67767664 7899999987541 1 235678889998865321
Q ss_pred EEEeCCeEEEEeccCCeEEE-EeeceEEEccCCC
Q 041537 269 VNVSDKEITMKIKSTGAVCS-IPHGLVLWSTGVG 301 (547)
Q Consensus 269 ~~v~~~~v~~~~~~~G~~~~-i~~D~vv~a~G~~ 301 (547)
... . -.+|+||.+.|+.
T Consensus 60 ---------------~~l-~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 60 ---------------AQL-DEFKADVYVIGNVAK 77 (326)
T ss_dssp ---------------GGG-GSCCCSEEEECTTCC
T ss_pred ---------------HHc-CCCCCCEEEECCCcC
Confidence 110 0 1489999999984
No 398
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.87 E-value=0.097 Score=51.13 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 358999999999999999999999999999986
No 399
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.79 E-value=0.11 Score=50.94 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=33.2
Q ss_pred CCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 25 EREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 25 ~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3456799999999999999999999999999999874
No 400
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.74 E-value=0.11 Score=52.12 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
|++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3389999999999999999999999999999863
No 401
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.59 E-value=0.17 Score=53.01 Aligned_cols=60 Identities=17% Similarity=0.208 Sum_probs=45.3
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCccc------------------HHHHHHH
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFD------------------ERISSFA 251 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~------------------~~~~~~~ 251 (547)
..+|+|||||.+|+.+|..|.+. +.+|+++++.+++..... ......+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--------------g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 98 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--------------GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIV 98 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--------------TCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHH
Confidence 45899999999999999999986 689999999887654210 0113456
Q ss_pred HHHHHhCCcEEE
Q 041537 252 EKKFQRDGIEVL 263 (547)
Q Consensus 252 ~~~l~~~GV~v~ 263 (547)
.+.+++.|+++.
T Consensus 99 ~~~~~~~g~~~~ 110 (498)
T 2iid_A 99 REYIRKFDLRLN 110 (498)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHhCCCce
Confidence 777888888653
No 402
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.50 E-value=0.097 Score=51.22 Aligned_cols=35 Identities=11% Similarity=0.271 Sum_probs=29.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~ 61 (547)
.+.+|.|||+|..|.++|..|...++ +|+|+|.+.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 45789999999999999999987777 899999864
No 403
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.45 E-value=0.13 Score=47.86 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=61.9
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceE
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRV 268 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V 268 (547)
.+++|+|||||.+|...+..|.+. +.+|+++.+. +.+++ .+..++.+|+++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--------------GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--------------GAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--------------CCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC-
Confidence 457999999999999888888765 7899999753 23343 2333445576653311
Q ss_pred EEEeCCeEEEEeccCCeEEEEeeceEEEccCCCCCcchHHHHHHhCCCCCccEEeCC----CCCcCCCCCEEEeCccC
Q 041537 269 VNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNE----WLRVKECENVYALGDCA 342 (547)
Q Consensus 269 ~~v~~~~v~~~~~~~G~~~~i~~D~vv~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~----~l~~~~~~~VfaiGD~a 342 (547)
.. +.. -.+|+||.|||. +.+....... ... +|.||- .+..--.|-++--||..
T Consensus 85 ----------~~---~dL--~~adLVIaAT~d---~~~N~~I~~~--ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 85 ----------GE---EDL--LNVFFIVVATND---QAVNKFVKQH--IKN-DQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ----------CG---GGS--SSCSEEEECCCC---THHHHHHHHH--SCT-TCEEEC-----CCSEECCEEEEETTEE
T ss_pred ----------CH---hHh--CCCCEEEECCCC---HHHHHHHHHH--HhC-CCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 11 111 348999999983 3332222222 123 355542 22222356666666654
No 404
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.43 E-value=0.17 Score=49.78 Aligned_cols=39 Identities=13% Similarity=0.247 Sum_probs=33.4
Q ss_pred CCCCCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 23 EKEREKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 23 ~~~~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+.....++|+|.|| |+-|..++..|.+.|++|++++++.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34455678999997 9999999999999999999999864
No 405
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.35 E-value=0.12 Score=51.28 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=30.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
+.+|+|||+|..|.+.|..|+..|+ +|+|+|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999998887 999999874
No 406
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.35 E-value=0.12 Score=50.79 Aligned_cols=34 Identities=9% Similarity=0.215 Sum_probs=30.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~ 61 (547)
+++|+|||+|..|...|..|...|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4589999999999999999998888 999999863
No 407
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.24 E-value=0.099 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=32.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...+|+|||+|..|+.+|+.|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45799999999999999999998999999999874
No 408
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.05 E-value=0.12 Score=51.20 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999974
No 409
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.97 E-value=0.16 Score=46.79 Aligned_cols=35 Identities=26% Similarity=0.511 Sum_probs=31.6
Q ss_pred CCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+++|+|.|| |+-|..++..|.+.|++|++++|++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 578999995 99999999999999999999998743
No 410
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.96 E-value=0.13 Score=51.72 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQ 60 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~ 60 (547)
....+|||+|||.||+.+|+.|...|. +|+++|++
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 345799999999999999999988888 89999987
No 411
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.96 E-value=0.11 Score=51.14 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=29.5
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 58999999999999999999999999999985
No 412
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.90 E-value=0.17 Score=51.96 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=31.0
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..+.+++|.|||.|.-|+..|..|++ |++|+++|+++
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34455689999999999999999998 99999999874
No 413
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.90 E-value=0.17 Score=50.64 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.+++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999863
No 414
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.83 E-value=0.15 Score=50.98 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+++|.|||+|..|...|..|.+.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999899999999986
No 415
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.67 E-value=0.23 Score=51.98 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=30.9
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL 240 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il 240 (547)
..|+|||||.+|+-+|..|++. .+.+|+|+|+.+++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-------------~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-------------DGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-------------CCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-------------CCCCEEEEECCCCCc
Confidence 3799999999999999999864 267889988887654
No 416
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.67 E-value=0.15 Score=52.84 Aligned_cols=33 Identities=12% Similarity=0.309 Sum_probs=31.0
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++|.|||+|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 417
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.66 E-value=0.18 Score=46.33 Aligned_cols=37 Identities=11% Similarity=0.293 Sum_probs=31.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
..+++|.|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3456899999999999999999999999999998754
No 418
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.54 E-value=0.17 Score=52.03 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.2
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD 237 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 237 (547)
.+|+|||||++|+-+|..|++. +.+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--------------G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--------------DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--------------TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCeEEEEcCCC
Confidence 4899999999999999999985 78999999876
No 419
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.54 E-value=0.21 Score=51.07 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=30.7
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
+|+|||||.+|+-+|..|++. +.+|+++|+.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN--------------GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeCCCCC
Confidence 799999999999999999875 6899999998765
No 420
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.42 E-value=0.15 Score=51.10 Aligned_cols=35 Identities=31% Similarity=0.303 Sum_probs=31.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQ 60 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~ 60 (547)
....+|||+|||-+|..+|+.|...|. +|+++|++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 346799999999999999999998888 79999987
No 421
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.36 E-value=0.14 Score=50.73 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=30.6
Q ss_pred CCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 26 REKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 26 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.++++|+|.|| |+-|..++..|.+.|++|+++++.+.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 45678999998 99999999999999999999998753
No 422
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.35 E-value=0.19 Score=49.61 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
+.+.+|.|||+|..|.++|..|...++ +|+|+|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 446799999999999999999987777 999999864
No 423
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.27 E-value=0.19 Score=45.40 Aligned_cols=33 Identities=24% Similarity=0.543 Sum_probs=30.6
Q ss_pred CeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 29 KRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++|+|+|| |+-|..++..|.+.|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999998 9999999999998899999999874
No 424
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.20 E-value=0.19 Score=49.03 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=32.2
Q ss_pred CCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 27 EKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
++++|+|.|| |+-|..++..|.+.|++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4679999998 99999999999989999999998754
No 425
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.18 E-value=0.18 Score=51.47 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=31.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...+|+|||+|.+|+.++..+...|.+|+++|++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35799999999999999999998999999999874
No 426
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.18 E-value=0.2 Score=49.20 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~ 60 (547)
..++|.|||+|..|.++|..|+..|+ +|+|+|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45789999999999999999998888 99999986
No 427
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.16 E-value=0.17 Score=49.90 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|.|||+|.-|.+.|..|+..|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999874
No 428
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.06 E-value=0.23 Score=48.32 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=32.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+++|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 429
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.01 E-value=0.24 Score=51.17 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=34.4
Q ss_pred CCCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 24 KEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 24 ~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+++..++|.|||+|.-|...|..|+..|++|+++|+++.
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 344567999999999999999999999999999998754
No 430
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.01 E-value=0.19 Score=52.37 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC-CC-eEEEEcCCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS-SY-DVQVVSPQNY 62 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~-g~-~Vtlid~~~~ 62 (547)
..++|.|||+|.-|+..|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 456899999999999999999988 99 9999998864
No 431
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.97 E-value=0.17 Score=46.72 Aligned_cols=34 Identities=32% Similarity=0.299 Sum_probs=29.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
.+++|.|||+|..|...|..|.+.|++|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999999999999999999889999999976
No 432
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.93 E-value=0.26 Score=51.28 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=32.7
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 456789999999999999999999999999999874
No 433
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.88 E-value=0.11 Score=48.06 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=31.5
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEE-EcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQV-VSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtl-id~~~ 61 (547)
+++++|.|||+|.-|.+.|..|.+.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 4467899999999999999999988999999 77763
No 434
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.88 E-value=0.18 Score=47.04 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..++|+|+|+|..|...|..|...|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 45689999999999999999999999 99999863
No 435
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=89.87 E-value=0.25 Score=50.43 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.8
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
+|+|||||.+|+-+|..|++. +.+|+++|+.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA--------------GHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCceEEEeCCCCC
Confidence 799999999999999999875 6899999998765
No 436
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.82 E-value=0.22 Score=49.28 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=30.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
+++|.|||+|..|.+.|..|+..|+ +|+|+|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999998888 999999874
No 437
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.80 E-value=0.21 Score=48.00 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=30.6
Q ss_pred eEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 30 RVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 30 ~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
+|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 799999999999999999999999999998753
No 438
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.73 E-value=0.23 Score=50.33 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=32.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...+|+|||+|.+|+.++..+...|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999998999999999874
No 439
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.72 E-value=0.24 Score=48.45 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|.|||+|.-|...|..|. .|++|+++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 358999999999999999999 999999999863
No 440
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=89.68 E-value=0.25 Score=48.96 Aligned_cols=33 Identities=15% Similarity=0.328 Sum_probs=30.0
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH 238 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 238 (547)
.|+|||||.+|+-+|..|++. +.+|+++++.+.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~--------------G~~V~vlE~~~~ 38 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAG--------------GHEVLVAEAAEG 38 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 799999999999999999974 789999999864
No 441
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.64 E-value=0.22 Score=48.63 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=31.3
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999863
No 442
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=89.60 E-value=0.23 Score=51.24 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=31.7
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
.+|+|||||.+|+-+|..|.+...+ ..++.+|+|+|+.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~--------~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKE--------KNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT--------TTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccc--------cCCCCCEEEEECCCCC
Confidence 4899999999999999999987310 0023799999988654
No 443
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.48 E-value=0.26 Score=45.27 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=29.9
Q ss_pred CCeEEEECC-chHHHHHHHhcC-CCCCeEEEEcCC
Q 041537 28 KKRVVLLGT-GWAGISFLKDLD-VSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGg-G~aGl~aA~~L~-~~g~~Vtlid~~ 60 (547)
+++|+|.|| |.-|..++..|. +.|++|++++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 466999995 999999999999 899999999986
No 444
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.40 E-value=0.27 Score=48.01 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=32.4
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 446789999999999999999999999999999863
No 445
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.40 E-value=0.26 Score=48.62 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
+++|.|||+|..|..+|..|+..|+ +|+|+|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999998887 899999764
No 446
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.22 E-value=0.19 Score=52.18 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.7
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
..++|+|||+|-.|...+..|.+.|++|+||+++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4578999999999999999999999999999985
No 447
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.20 E-value=0.27 Score=50.24 Aligned_cols=34 Identities=26% Similarity=0.596 Sum_probs=30.4
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCcc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHI 239 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 239 (547)
.|+|||||.+|+-+|..|++. +.+|+|+|+.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~--------------G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA--------------GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc--------------CCeEEEEecCCCc
Confidence 799999999999999999985 6899999987654
No 448
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.17 E-value=0.23 Score=51.84 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..+|.|||+|.-|+..|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3589999999999999999999999999999864
No 449
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.13 E-value=0.23 Score=48.85 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=30.8
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
+++|.|||+|..|.+.|..|+..|+ +|+|+|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999998888 999999874
No 450
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=89.11 E-value=0.27 Score=47.21 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=30.8
Q ss_pred CCCCCCCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCC
Q 041537 21 HGEKEREKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 21 ~~~~~~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
...+....++|+|.|| |+-|..++..|.+.|++|++++++
T Consensus 5 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 5 KIHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp -------CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred ccccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence 3345556789999997 999999999999999999999986
No 451
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.06 E-value=0.7 Score=39.12 Aligned_cols=73 Identities=14% Similarity=0.232 Sum_probs=47.8
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccCCcccHHHHHHHHHHHHhCCcEEEcCceEEE
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVN 270 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~l~~~GV~v~~~~~V~~ 270 (547)
.+++|+|+|..|..+|..|... +.+|+++++.+. .. +.+++.|+.++.+..-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--------------g~~v~vid~~~~--------~~----~~~~~~g~~~i~gd~~-- 59 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--------------DIPLVVIETSRT--------RV----DELRERGVRAVLGNAA-- 59 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCHH--------HH----HHHHHTTCEEEESCTT--
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCHH--------HH----HHHHHcCCCEEECCCC--
Confidence 3899999999999999999875 689999998642 21 3345678876543110
Q ss_pred EeCCeEEEEeccCCeEEEEeeceEEEccC
Q 041537 271 VSDKEITMKIKSTGAVCSIPHGLVLWSTG 299 (547)
Q Consensus 271 v~~~~v~~~~~~~G~~~~i~~D~vv~a~G 299 (547)
... .+.. .+- -.+|.+|.+++
T Consensus 60 --~~~-~l~~--a~i---~~ad~vi~~~~ 80 (140)
T 3fwz_A 60 --NEE-IMQL--AHL---ECAKWLILTIP 80 (140)
T ss_dssp --SHH-HHHH--TTG---GGCSEEEECCS
T ss_pred --CHH-HHHh--cCc---ccCCEEEEECC
Confidence 000 0000 121 35899999987
No 452
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.93 E-value=0.25 Score=49.54 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=31.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.++|+|+|+|.+|+.++..|+..|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999999863
No 453
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.91 E-value=0.27 Score=48.20 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=29.7
Q ss_pred CeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
++|.|||+|..|...|..|+..|+ +|+|+|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999987776 899999764
No 454
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.90 E-value=0.3 Score=48.14 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=31.1
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
|.+.+|.|||+|..|.++|..|...++ +|+|+|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345789999999999999999987676 999999874
No 455
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=88.90 E-value=0.33 Score=49.53 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=31.1
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCC-ceEEEEecCCcc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDL-VRITLIQSGDHI 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~-~~V~lv~~~~~i 239 (547)
.+|+|||||.+|+-+|..|.+. + .+|+++|+.+++
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA--------------GFHDYTILERTDHV 42 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEECCCCC
Confidence 4899999999999999999874 6 799999998776
No 456
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.89 E-value=0.14 Score=49.76 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=30.6
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|.|||+|--|...|..|.+.|++|++++|+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3589999999999999999998899999999874
No 457
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=88.88 E-value=0.32 Score=49.16 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=29.2
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD 237 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 237 (547)
.|+|||||+.|++.|..+++. +.+|+|+++.+
T Consensus 3 dViVIGgG~AG~~AA~~la~~--------------G~~V~liE~~~ 34 (443)
T 3g5s_A 3 RVNVVGAGLAGSEAAWTLLRL--------------GVPVRLFEMRP 34 (443)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECCTT
T ss_pred CEEEECchHHHHHHHHHHHHC--------------CCcEEEEeccC
Confidence 799999999999999999985 78999999765
No 458
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.73 E-value=0.37 Score=48.56 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=32.1
Q ss_pred ccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecC-Ccc
Q 041537 189 RNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSG-DHI 239 (547)
Q Consensus 189 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~i 239 (547)
...+|+|||+|.+|+-+|..|.+. +.+|+|+|+. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--------------G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--------------GHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--------------SCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--------------CCcEEEEecccccc
Confidence 346999999999999999999875 6899999998 654
No 459
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.72 E-value=0.27 Score=46.31 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=31.8
Q ss_pred CCCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 25 EREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 25 ~~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
....++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3456899999999999999999999999999999874
No 460
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.71 E-value=0.48 Score=40.93 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=31.5
Q ss_pred hccccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc
Q 041537 188 KRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH 238 (547)
Q Consensus 188 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 238 (547)
....+|+|+|+|.+|..+|..|... +.+|+++++.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~--------------g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS--------------GHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCHH
Confidence 4556999999999999999998864 679999998764
No 461
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.71 E-value=0.32 Score=47.17 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=31.0
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
...++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 45689999999999999999999 999999999874
No 462
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=88.69 E-value=0.36 Score=48.75 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=29.6
Q ss_pred cEEEEcCChhHHHHHHHHHH-HHHHhhhhhCCCCCCC-ceEEEEecCC
Q 041537 192 HFVIVGGGPTGVEFAAELHD-YIQEDLINLYPTVKDL-VRITLIQSGD 237 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~-~~~~~~~~~~~~~~~~-~~V~lv~~~~ 237 (547)
.|+|||||.+|+-+|..|++ . + .+|+|+++.+
T Consensus 23 dVvIIG~G~~Gl~~A~~La~~~--------------G~~~V~vlE~~~ 56 (405)
T 2gag_B 23 DAIIVGGGGHGLATAYFLAKNH--------------GITNVAVLEKGW 56 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH--------------CCCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhc--------------CCCcEEEEeCCC
Confidence 89999999999999999998 5 6 7999999876
No 463
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.64 E-value=0.24 Score=49.17 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=30.9
Q ss_pred CCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
|.+++|+|+|| |+-|-..+..|.+.|++|+++.|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44678999998 9999999999998899999999875
No 464
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=88.63 E-value=0.27 Score=48.57 Aligned_cols=36 Identities=25% Similarity=0.488 Sum_probs=31.1
Q ss_pred CCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+.+++|+|.|| |+-|..++..|.+.|++|+++++..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45678999998 9999999999998899999999853
No 465
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.62 E-value=0.24 Score=51.86 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCC--CCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVS--SYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~--g~~Vtlid~~~ 61 (547)
++++|.|||.|.-|+..|..|++. |++|+++|++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 346899999999999999999876 79999999864
No 466
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=88.60 E-value=0.28 Score=50.95 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=30.4
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCc--eEEEEecCCcc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLV--RITLIQSGDHI 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~~~i 239 (547)
++|+|||||.+|+-+|..|.+. +. +|+++|+.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~--------------G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA--------------PCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS--------------SSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC--------------CCCCcEEEEeCCCCC
Confidence 3899999999999999999864 56 99999997754
No 467
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.51 E-value=0.24 Score=46.95 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~~ 61 (547)
.++|+|||+|-.|..+|..|++.|. +|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 799999863
No 468
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.44 E-value=0.25 Score=50.59 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=31.5
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+.+|+|||.|-.|..+|..|...|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999874
No 469
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.30 E-value=0.26 Score=47.96 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5689999999999999999999999999999863
No 470
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.27 E-value=0.39 Score=48.95 Aligned_cols=31 Identities=23% Similarity=0.453 Sum_probs=29.1
Q ss_pred eEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 30 RVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 30 ~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+|.|||+|.-|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999864
No 471
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=88.26 E-value=0.33 Score=51.11 Aligned_cols=35 Identities=23% Similarity=0.448 Sum_probs=30.0
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCC-ceEEEEecCCcc
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDL-VRITLIQSGDHI 239 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~-~~V~lv~~~~~i 239 (547)
.+|+|||||.+|+-+|..|.+. + .+|+|+|+.+++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~--------------G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN--------------GIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--------------TCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhc--------------CCCCEEEEeCCCCC
Confidence 4899999999999999999875 5 788888887754
No 472
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.24 E-value=0.33 Score=46.57 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
..++|+|+|+|-.|.++|..|.+.|.+|++++|+
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999889999999976
No 473
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.23 E-value=0.3 Score=47.76 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=29.9
Q ss_pred CeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~ 61 (547)
++|+|||+|..|.+.|..|+..|+ +|+|+|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999998888 999999863
No 474
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.20 E-value=0.31 Score=44.51 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=29.5
Q ss_pred eEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 30 RVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 30 ~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+|+|+|| |+.|..++..|.+.|++|++++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999873
No 475
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.14 E-value=0.29 Score=48.07 Aligned_cols=34 Identities=18% Similarity=0.355 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
..+|.|||+|.-|-.-|..++..|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999874
No 476
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=88.12 E-value=0.35 Score=48.51 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=29.6
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCc
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDH 238 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 238 (547)
.|+|||||.+|+-+|..|++. +.+|+|+++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~--------------G~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQ--------------GVKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 799999999999999999875 689999998764
No 477
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=88.08 E-value=0.33 Score=47.49 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999998899999999863
No 478
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.07 E-value=0.42 Score=46.90 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=31.9
Q ss_pred CCCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCC
Q 041537 25 EREKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 25 ~~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
..+.++|+|.|| |+-|..++..|.+.|++|++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345678999998 999999999999899999999875
No 479
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.06 E-value=0.32 Score=47.86 Aligned_cols=34 Identities=15% Similarity=0.398 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCC--eEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSY--DVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~--~Vtlid~~~ 61 (547)
+.||+|||+|..|.++|..|...+. +|+|+|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999987776 899999763
No 480
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.05 E-value=0.36 Score=48.36 Aligned_cols=33 Identities=33% Similarity=0.465 Sum_probs=29.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD 237 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 237 (547)
..|+|||||.+|+-+|..|++. +.+|+|+++.+
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~--------------G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKR--------------GEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeCCC
Confidence 3899999999999999999975 68999999874
No 481
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.98 E-value=0.41 Score=46.56 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCC-eEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSY-DVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~Vtlid~~ 60 (547)
..++|+|||+|-+|..+|..|...|+ +|++++|+
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35789999999999999999999998 89999986
No 482
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.96 E-value=0.37 Score=46.07 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.++|+|||+|-+|-+++..|...|.+|+|++|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999999999999998889999999874
No 483
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.95 E-value=0.32 Score=48.13 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+.++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4578999999999999999999999999999986
No 484
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.90 E-value=0.43 Score=48.29 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
...++|+|||+|..|..++..+++.|++|+++|+.+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4567999999999999999999999999999997654
No 485
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=87.89 E-value=0.38 Score=50.72 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=30.2
Q ss_pred CcEEEcCceEEEEeC--CeEEEEeccCCeEEEEeeceEEEccCC
Q 041537 259 GIEVLTECRVVNVSD--KEITMKIKSTGAVCSIPHGLVLWSTGV 300 (547)
Q Consensus 259 GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vv~a~G~ 300 (547)
|++|++++.|++|+. +++.+.. .+|+. +.+|.||+|++.
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~VI~a~p~ 266 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVET-LNHEM--YEAKYVISAIPP 266 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEE-TTSCE--EEESEEEECSCG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEE-CCCeE--EEeCEEEECCCH
Confidence 678999999999963 4566544 45664 899999999884
No 486
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.83 E-value=0.32 Score=47.84 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=31.8
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45689999999999999999999999999999863
No 487
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.77 E-value=0.33 Score=48.81 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
..++|+|+|+|..|..+|..|+..|++|+++|++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4579999999999999999999999999999976
No 488
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.75 E-value=0.55 Score=45.64 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=31.3
Q ss_pred CCeEEEEC-CchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLG-TGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIG-gG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+++|.||| .|.-|.+.|..|.+.|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999 99999999999999999999999864
No 489
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.75 E-value=0.34 Score=48.50 Aligned_cols=36 Identities=14% Similarity=0.248 Sum_probs=31.6
Q ss_pred CCCCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 26 REKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 26 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345799999999999999999999999999999863
No 490
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.73 E-value=0.34 Score=47.61 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHhcCCCC-CeEEEEcCCC
Q 041537 27 EKKRVVLLGTGWAGISFLKDLDVSS-YDVQVVSPQN 61 (547)
Q Consensus 27 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~Vtlid~~~ 61 (547)
++++|.|||.|.-|...|..|.+.| ++|+++|+++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3468999999999999999999999 9999999874
No 491
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.69 E-value=0.35 Score=47.48 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCCCCCCeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCCC
Q 041537 23 EKEREKKRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQNY 62 (547)
Q Consensus 23 ~~~~~~~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~~ 62 (547)
.++.++++|+|.|| |+-|..++..|.+.|++|+++++.+.
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45566789999997 99999999999989999999998753
No 492
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=87.65 E-value=0.45 Score=49.61 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=31.8
Q ss_pred cccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCCccC
Q 041537 190 NLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHIL 240 (547)
Q Consensus 190 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il 240 (547)
..+|+|||+|.+|+-+|..|.+. +.+|+++|+.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~--------------g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA--------------GYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeccCCCC
Confidence 34899999999999999999874 67999999887654
No 493
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.59 E-value=0.41 Score=43.68 Aligned_cols=31 Identities=35% Similarity=0.403 Sum_probs=29.2
Q ss_pred eEEEEC-CchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 30 RVVLLG-TGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 30 ~VvIIG-gG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+|.||| +|..|...|..|.+.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999986
No 494
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.58 E-value=0.21 Score=48.28 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
|++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 3589999999999999999999999999999874
No 495
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=87.51 E-value=0.46 Score=47.06 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=29.4
Q ss_pred cEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecCC
Q 041537 192 HFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGD 237 (547)
Q Consensus 192 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 237 (547)
.|+|||||.+|+-+|..|++.... ..++.+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~--------~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHS--------VLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTT--------TSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccc--------cCCCceEEEEECCC
Confidence 799999999999999999986300 00137999999875
No 496
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=87.40 E-value=0.23 Score=48.49 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=28.7
Q ss_pred CeEEEECCchHHHHHHHhcCCC-----C-CeEEEEcC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVS-----S-YDVQVVSP 59 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~-----g-~~Vtlid~ 59 (547)
++|.|||+|.-|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999887 8 99999986
No 497
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.38 E-value=0.35 Score=46.65 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=30.7
Q ss_pred CeEEEECCchHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 29 KRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999874
No 498
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=87.31 E-value=0.47 Score=47.23 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=28.6
Q ss_pred ccEEEEcCChhHHHHHHHHHHHHHHhhhhhCCCCCCCceEEEEecC
Q 041537 191 LHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSG 236 (547)
Q Consensus 191 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 236 (547)
..|+|||||.+|+-+|..|++. +.+|+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~--------------G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARK--------------GYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCEEEEEecc
Confidence 3899999999999999999874 6899999975
No 499
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.30 E-value=0.36 Score=46.66 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=30.2
Q ss_pred CeEEEECC-chHHHHHHHhcCCCCCeEEEEcCCC
Q 041537 29 KRVVLLGT-GWAGISFLKDLDVSSYDVQVVSPQN 61 (547)
Q Consensus 29 ~~VvIIGg-G~aGl~aA~~L~~~g~~Vtlid~~~ 61 (547)
+||+|.|| |+-|-.++..|.+.|++|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 36999998 9999999999999999999998864
No 500
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.27 E-value=0.56 Score=44.36 Aligned_cols=33 Identities=12% Similarity=0.311 Sum_probs=30.2
Q ss_pred CCeEEEECCchHHHHHHHhcCCCCCeEEEEcCC
Q 041537 28 KKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQ 60 (547)
Q Consensus 28 ~~~VvIIGgG~aGl~aA~~L~~~g~~Vtlid~~ 60 (547)
+.+|.|||.|.-|...|..|.+.|++|+++|++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 358999999999999999999889999999976
Done!