Citrus Sinensis ID: 041537

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
GGGLVAYSESQSEPGSPASEHGEKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQGNPRREVDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI
ccccEEEccccccccccccccccccccccEEEEEcccHHHHHHHHccccccccEEEEcccccccccccccHHcccccccccccHHHHHHHHcccccEEEEEEEEEEECccccEEEEcccccccccEEEEcccEEEEEccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEccccEEEECccEEEEEEcccccEEEEcccEEEEcccccccHHHHHHHHHHccccccEEEEcccccccccccEEEEccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHcccccccccccccccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEccccEEEEccccEEECcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccc
**GL**Y**********************RVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQGNPRREVDIEGFTLALSHVDTQ********QVAAQQGAYLARNFNRRQQ**********FRGLGRHHFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI
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GGGLVAYSESQSEPGSPASEHGEKEREKKRVVLLGTGWAGISFLKDLDVSSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIAEPVRNIIKKRNAEIQFWEAEAIKIDAAKNEVFCKSNIDKETRDFSLEYDYLIIAVGAQVNTFGTPGVLENCHFLKELEDAQKIRRTVTDCFEKAVLPGLSEEERKRNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDLVRITLIQSGDHILNSFDERISSFAEKKFQRDGIEVLTECRVVNVSDKEITMKIKSTGAVCSIPHGLVLWSTGVGTRPAIKDFMEQIGQGKRRVLATNEWLRVKECENVYALGDCATIDQRKVMEDISTIFAAADKDNSGTLTVEEFQDVIDDILIRYPQVELYLKNKHLNDVTDLLKDPQGNPRREVDIEGFTLALSHVDTQMKSLPATAQVAAQQGAYLARNFNRRQQCKEHPEGPRRFRGLGRHHFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
NAD(P)H dehydrogenase B1, mitochondrial Calcium-dependent NAD(P)H dehydrogenase. Binds calcium ions.confidentQ1JPL4

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NTD, chain A
Confidence level:very confident
Coverage over the Query: 28-172,188-212,227-345
View the alignment between query and template
View the model in PyMOL
Template: 3SX6, chain A
Confidence level:very confident
Coverage over the Query: 28-175,190-348,366,427-458,474-526
View the alignment between query and template
View the model in PyMOL
Template: 4G6H, chain A
Confidence level:very confident
Coverage over the Query: 24-344,432-546
View the alignment between query and template
View the model in PyMOL
Template: 4G6G, chain A
Confidence level:probable
Coverage over the Query: 27-342
View the alignment between query and template
View the model in PyMOL