Query 041538
Match_columns 225
No_of_seqs 109 out of 1274
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:10:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3104 PTR2 Dipeptide/tripept 99.9 5.2E-25 1.1E-29 198.1 10.7 175 22-225 17-195 (498)
2 PRK10207 dipeptide/tripeptide 99.9 1E-22 2.2E-27 187.2 16.9 171 22-222 10-180 (489)
3 PRK15462 dipeptide/tripeptide 99.9 2.3E-21 4.9E-26 177.9 16.9 171 23-223 6-176 (493)
4 TIGR00924 yjdL_sub1_fam amino 99.9 1.3E-20 2.9E-25 172.5 16.0 172 22-223 6-179 (475)
5 PRK09584 tppB putative tripept 99.8 1.4E-19 3E-24 166.9 17.4 171 23-223 18-188 (500)
6 KOG1237 H+/oligopeptide sympor 99.7 3E-17 6.4E-22 153.0 15.5 201 21-224 32-233 (571)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.7 3.4E-16 7.4E-21 140.6 15.6 166 23-223 5-176 (412)
8 PRK11663 regulatory protein Uh 99.7 2E-16 4.4E-21 142.8 13.8 158 31-223 28-185 (434)
9 PRK10054 putative transporter; 99.7 7.2E-16 1.6E-20 137.8 17.0 164 25-223 6-169 (395)
10 PRK10213 nepI ribonucleoside t 99.7 7E-16 1.5E-20 137.8 16.1 167 22-223 16-182 (394)
11 PF07690 MFS_1: Major Facilita 99.7 1.1E-15 2.3E-20 132.0 15.4 157 33-223 3-159 (352)
12 PRK03545 putative arabinose tr 99.7 6.9E-16 1.5E-20 137.0 14.6 164 25-223 8-171 (390)
13 PRK05122 major facilitator sup 99.7 8.9E-16 1.9E-20 136.3 15.1 172 25-222 14-185 (399)
14 PRK10504 putative transporter; 99.7 9.2E-16 2E-20 139.3 15.3 161 26-221 10-170 (471)
15 PRK12382 putative transporter; 99.7 1.3E-15 2.8E-20 135.1 15.9 170 26-221 15-184 (392)
16 TIGR00891 2A0112 putative sial 99.7 2.2E-15 4.8E-20 132.7 16.8 166 22-222 8-175 (405)
17 TIGR00926 2A1704 Peptide:H+ sy 99.7 5.9E-16 1.3E-20 146.5 13.8 163 40-224 1-170 (654)
18 PRK14995 methyl viologen resis 99.7 1.3E-15 2.9E-20 139.9 15.3 163 26-222 6-168 (495)
19 PRK12307 putative sialic acid 99.7 2.4E-15 5.2E-20 134.5 16.1 165 23-222 15-179 (426)
20 PRK11646 multidrug resistance 99.7 4.7E-15 1E-19 132.7 16.3 160 29-223 13-172 (400)
21 TIGR00710 efflux_Bcr_CflA drug 99.7 3.3E-15 7.2E-20 131.0 15.0 164 25-223 4-167 (385)
22 PRK11551 putative 3-hydroxyphe 99.6 4.1E-15 8.9E-20 132.2 15.7 166 22-222 11-176 (406)
23 PRK03893 putative sialic acid 99.6 7.3E-15 1.6E-19 134.0 17.0 165 23-222 17-181 (496)
24 KOG1330 Sugar transporter/spin 99.6 3.3E-16 7.2E-21 140.1 7.6 166 24-224 31-197 (493)
25 TIGR00711 efflux_EmrB drug res 99.6 5E-15 1.1E-19 134.3 15.4 160 28-222 4-163 (485)
26 PRK10406 alpha-ketoglutarate t 99.6 9.6E-15 2.1E-19 131.8 16.7 166 31-223 27-206 (432)
27 TIGR00895 2A0115 benzoate tran 99.6 7.1E-15 1.5E-19 128.8 15.0 163 25-222 16-178 (398)
28 PRK11652 emrD multidrug resist 99.6 1.2E-14 2.6E-19 129.0 15.3 165 23-222 5-169 (394)
29 COG2814 AraJ Arabinose efflux 99.6 1.4E-14 3.1E-19 128.8 15.3 166 23-223 10-175 (394)
30 TIGR00900 2A0121 H+ Antiporter 99.6 6.5E-15 1.4E-19 127.6 12.4 161 33-223 6-166 (365)
31 TIGR00886 2A0108 nitrite extru 99.6 2.2E-14 4.8E-19 125.3 15.4 158 28-219 3-170 (366)
32 cd06174 MFS The Major Facilita 99.6 2.6E-14 5.6E-19 122.6 15.5 158 31-223 4-161 (352)
33 PRK10091 MFS transport protein 99.6 1.9E-14 4.1E-19 127.7 14.9 163 26-223 3-165 (382)
34 COG2271 UhpC Sugar phosphate p 99.6 1.6E-15 3.4E-20 134.6 7.8 162 29-224 28-194 (448)
35 PRK03699 putative transporter; 99.6 3.3E-14 7.2E-19 126.6 16.4 165 24-223 5-170 (394)
36 TIGR00890 2A0111 Oxalate/Forma 99.6 2.7E-14 5.9E-19 124.0 15.1 163 28-223 207-369 (377)
37 TIGR00879 SP MFS transporter, 99.6 1.6E-14 3.5E-19 129.1 13.7 133 59-222 68-203 (481)
38 PRK15011 sugar efflux transpor 99.6 6.5E-14 1.4E-18 124.8 17.5 165 24-223 214-378 (393)
39 TIGR00893 2A0114 d-galactonate 99.6 1.2E-14 2.6E-19 126.4 12.5 143 47-223 14-156 (399)
40 PRK15402 multidrug efflux syst 99.6 3.4E-14 7.3E-19 126.7 15.4 150 39-223 26-175 (406)
41 TIGR00903 2A0129 major facilit 99.6 2.4E-14 5.1E-19 127.3 14.1 141 48-223 12-152 (368)
42 PRK15403 multidrug efflux syst 99.6 3E-14 6.5E-19 128.2 14.9 143 46-223 36-178 (413)
43 PRK11043 putative transporter; 99.6 5.6E-14 1.2E-18 125.0 16.4 151 38-222 15-167 (401)
44 PLN00028 nitrate transmembrane 99.6 5.7E-14 1.2E-18 128.7 16.7 164 24-223 34-206 (476)
45 TIGR00899 2A0120 sugar efflux 99.6 5.4E-14 1.2E-18 123.0 15.2 159 33-223 4-163 (375)
46 PRK09952 shikimate transporter 99.6 9E-14 1.9E-18 125.9 16.3 173 25-223 21-207 (438)
47 TIGR00890 2A0111 Oxalate/Forma 99.6 3.9E-14 8.4E-19 123.0 13.4 146 42-223 19-164 (377)
48 TIGR00883 2A0106 metabolite-pr 99.6 2.1E-14 4.6E-19 125.4 11.5 165 27-221 220-386 (394)
49 PRK09556 uhpT sugar phosphate 99.6 4.9E-15 1.1E-19 135.0 7.7 144 50-222 52-198 (467)
50 PRK10473 multidrug efflux syst 99.6 1.1E-13 2.3E-18 122.8 16.0 160 28-222 5-164 (392)
51 PRK09556 uhpT sugar phosphate 99.6 1.3E-13 2.8E-18 125.7 16.7 165 26-222 258-435 (467)
52 TIGR00892 2A0113 monocarboxyla 99.6 1.1E-13 2.3E-18 126.1 16.1 138 51-223 43-181 (455)
53 PRK09874 drug efflux system pr 99.6 1.3E-13 2.8E-18 122.3 16.2 161 27-223 15-180 (408)
54 PRK03633 putative MFS family t 99.6 1.4E-13 2.9E-18 122.0 15.9 151 26-211 6-156 (381)
55 TIGR00806 rfc RFC reduced fola 99.6 1.9E-13 4.1E-18 124.2 16.6 138 45-218 44-182 (511)
56 PRK10642 proline/glycine betai 99.6 9.8E-14 2.1E-18 127.3 15.0 164 24-218 248-412 (490)
57 PRK11273 glpT sn-glycerol-3-ph 99.6 4.5E-14 9.8E-19 128.2 12.6 145 48-223 50-195 (452)
58 TIGR00891 2A0112 putative sial 99.5 2.1E-13 4.5E-18 120.1 16.3 157 34-223 246-403 (405)
59 PRK03699 putative transporter; 99.5 2.9E-13 6.3E-18 120.6 17.3 162 26-222 205-366 (394)
60 PRK09705 cynX putative cyanate 99.5 1.1E-13 2.5E-18 123.4 14.6 147 38-220 21-168 (393)
61 TIGR01299 synapt_SV2 synaptic 99.5 6.8E-14 1.5E-18 134.2 13.8 144 45-222 185-341 (742)
62 TIGR00897 2A0118 polyol permea 99.5 2.3E-13 5E-18 121.6 16.3 163 24-217 11-174 (402)
63 TIGR00899 2A0120 sugar efflux 99.5 3.1E-13 6.7E-18 118.3 16.6 154 35-223 208-361 (375)
64 PRK09952 shikimate transporter 99.5 1.5E-13 3.3E-18 124.4 14.9 166 26-221 250-418 (438)
65 PRK10077 xylE D-xylose transpo 99.5 1.3E-13 2.8E-18 125.2 14.4 143 58-223 51-202 (479)
66 PRK11102 bicyclomycin/multidru 99.5 8.8E-14 1.9E-18 122.2 12.7 145 43-222 8-152 (377)
67 TIGR00881 2A0104 phosphoglycer 99.5 3.7E-14 8.1E-19 123.2 10.2 140 49-222 17-157 (379)
68 COG2271 UhpC Sugar phosphate p 99.5 7E-14 1.5E-18 124.2 11.9 168 24-222 250-420 (448)
69 PRK10133 L-fucose transporter; 99.5 4.8E-13 1E-17 121.4 17.2 153 24-208 24-176 (438)
70 PRK15075 citrate-proton sympor 99.5 4.6E-13 9.9E-18 120.9 16.9 170 25-221 14-197 (434)
71 PRK10642 proline/glycine betai 99.5 3.2E-13 6.8E-18 124.0 15.9 171 26-223 16-200 (490)
72 TIGR00712 glpT glycerol-3-phos 99.5 1E-13 2.3E-18 125.2 11.6 144 49-223 49-193 (438)
73 TIGR00885 fucP L-fucose:H+ sym 99.5 5.5E-13 1.2E-17 120.1 16.1 149 28-208 5-153 (410)
74 cd06174 MFS The Major Facilita 99.5 9.7E-13 2.1E-17 112.8 16.8 159 31-223 180-339 (352)
75 PRK11195 lysophospholipid tran 99.5 4.5E-13 9.8E-18 119.7 14.8 155 28-221 5-159 (393)
76 PRK15011 sugar efflux transpor 99.5 1.3E-12 2.8E-17 116.5 17.3 162 28-223 17-181 (393)
77 TIGR00893 2A0114 d-galactonate 99.5 9E-13 2E-17 114.6 15.8 167 26-223 215-386 (399)
78 PRK15034 nitrate/nitrite trans 99.5 8.8E-13 1.9E-17 120.3 16.1 153 25-207 33-185 (462)
79 TIGR00882 2A0105 oligosacchari 99.5 1.1E-12 2.3E-17 116.8 15.9 169 26-223 2-170 (396)
80 TIGR00881 2A0104 phosphoglycer 99.5 9E-13 2E-17 114.5 14.5 162 26-218 216-379 (379)
81 TIGR00894 2A0114euk Na(+)-depe 99.5 8.1E-13 1.8E-17 120.0 14.5 136 56-223 70-206 (465)
82 TIGR00887 2A0109 phosphate:H+ 99.5 1.5E-12 3.3E-17 119.7 16.1 157 24-208 14-174 (502)
83 PRK10489 enterobactin exporter 99.5 1.9E-13 4E-18 122.5 9.8 162 32-223 23-184 (417)
84 PRK09705 cynX putative cyanate 99.5 2.7E-12 5.8E-17 114.6 16.9 162 26-222 205-367 (393)
85 TIGR01272 gluP glucose/galacto 99.4 3.9E-12 8.4E-17 110.6 15.9 161 25-222 139-301 (310)
86 PRK03893 putative sialic acid 99.4 1.7E-12 3.7E-17 118.4 14.0 144 44-220 293-437 (496)
87 TIGR00897 2A0118 polyol permea 99.4 2.7E-12 5.8E-17 114.7 14.8 166 26-223 222-388 (402)
88 PRK09874 drug efflux system pr 99.4 2.1E-12 4.6E-17 114.5 13.8 155 35-223 228-385 (408)
89 PRK11551 putative 3-hydroxyphe 99.4 3E-12 6.4E-17 113.8 14.5 152 33-219 227-379 (406)
90 PRK15075 citrate-proton sympor 99.4 1.7E-12 3.7E-17 117.2 13.0 153 32-215 244-398 (434)
91 TIGR00889 2A0110 nucleoside tr 99.4 2.2E-12 4.8E-17 116.3 13.7 163 30-223 212-389 (418)
92 PRK10406 alpha-ketoglutarate t 99.4 3.3E-12 7.1E-17 115.3 14.4 154 35-220 252-408 (432)
93 PRK11273 glpT sn-glycerol-3-ph 99.4 5.5E-12 1.2E-16 114.5 15.8 166 26-223 253-422 (452)
94 TIGR00902 2A0127 phenyl propri 99.4 5.1E-12 1.1E-16 112.2 15.3 160 26-222 205-365 (382)
95 PRK09528 lacY galactoside perm 99.4 2.8E-12 6.1E-17 115.0 13.7 169 26-223 10-178 (420)
96 TIGR00805 oat sodium-independe 99.4 6.4E-13 1.4E-17 125.9 9.7 177 25-211 31-234 (633)
97 PRK03545 putative arabinose tr 99.4 1.7E-11 3.7E-16 108.8 17.6 161 28-223 207-367 (390)
98 PRK03633 putative MFS family t 99.4 8.1E-12 1.8E-16 110.7 15.1 146 40-223 214-359 (381)
99 TIGR01299 synapt_SV2 synaptic 99.4 4.9E-12 1.1E-16 121.5 14.6 120 67-221 600-719 (742)
100 TIGR00900 2A0121 H+ Antiporter 99.4 1.4E-11 3E-16 106.7 16.0 155 26-213 210-365 (365)
101 PRK09528 lacY galactoside perm 99.4 1.5E-12 3.3E-17 116.7 10.3 150 40-223 237-390 (420)
102 PRK12382 putative transporter; 99.4 5.8E-12 1.3E-16 111.7 13.8 149 38-223 228-376 (392)
103 TIGR00896 CynX cyanate transpo 99.4 2.4E-11 5.2E-16 106.4 17.4 153 26-213 197-350 (355)
104 TIGR00896 CynX cyanate transpo 99.4 1.6E-12 3.4E-17 113.8 9.8 140 46-222 20-161 (355)
105 PRK11663 regulatory protein Uh 99.4 7.4E-12 1.6E-16 113.1 14.4 166 27-223 244-411 (434)
106 PRK05122 major facilitator sup 99.4 7.6E-12 1.6E-16 111.1 14.1 150 37-223 227-376 (399)
107 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1.3E-11 2.8E-16 111.0 15.2 163 27-223 243-408 (412)
108 TIGR00892 2A0113 monocarboxyla 99.4 1.5E-11 3.2E-16 112.1 14.8 164 26-223 241-408 (455)
109 PRK10489 enterobactin exporter 99.4 6.3E-12 1.4E-16 112.6 12.1 147 42-222 239-385 (417)
110 TIGR00898 2A0119 cation transp 99.4 4.4E-12 9.6E-17 116.2 11.3 135 52-223 114-251 (505)
111 TIGR00711 efflux_EmrB drug res 99.3 2.2E-11 4.7E-16 110.5 14.9 156 26-211 255-410 (485)
112 TIGR00895 2A0115 benzoate tran 99.3 2.5E-11 5.5E-16 106.3 14.8 145 29-208 253-397 (398)
113 TIGR02718 sider_RhtX_FptX side 99.3 3.1E-11 6.8E-16 107.2 15.3 168 28-223 210-378 (390)
114 COG2223 NarK Nitrate/nitrite t 99.3 1.4E-11 3.1E-16 109.4 12.3 169 25-221 217-386 (417)
115 PRK14995 methyl viologen resis 99.3 3.2E-11 6.9E-16 111.0 15.1 155 26-211 259-413 (495)
116 PTZ00207 hypothetical protein; 99.3 6.4E-11 1.4E-15 111.0 17.2 147 43-222 44-191 (591)
117 PRK08633 2-acyl-glycerophospho 99.3 2.8E-11 6E-16 120.9 15.1 154 27-211 10-165 (1146)
118 PRK11128 putative 3-phenylprop 99.3 6.4E-11 1.4E-15 105.1 15.4 157 26-219 205-362 (382)
119 PRK12307 putative sialic acid 99.3 9E-11 1.9E-15 105.0 16.4 144 41-217 246-389 (426)
120 TIGR00792 gph sugar (Glycoside 99.3 2E-11 4.3E-16 109.4 11.9 163 26-215 222-384 (437)
121 PRK11010 ampG muropeptide tran 99.3 1E-10 2.2E-15 107.8 16.8 165 29-223 225-390 (491)
122 KOG2532 Permease of the major 99.3 1.1E-11 2.4E-16 113.5 10.1 138 55-224 66-204 (466)
123 PRK11010 ampG muropeptide tran 99.3 8.7E-11 1.9E-15 108.2 15.9 167 24-223 10-182 (491)
124 KOG0254 Predicted transporter 99.3 9.9E-11 2.2E-15 108.2 16.3 125 63-222 90-216 (513)
125 TIGR00902 2A0127 phenyl propri 99.3 8.3E-11 1.8E-15 104.4 15.0 158 29-222 7-165 (382)
126 TIGR00880 2_A_01_02 Multidrug 99.3 6.5E-12 1.4E-16 93.8 6.7 119 70-222 6-124 (141)
127 PRK10504 putative transporter; 99.3 7.2E-11 1.6E-15 107.2 14.8 158 26-214 261-418 (471)
128 PRK06814 acylglycerophosphoeth 99.3 4.6E-11 1E-15 119.7 14.6 136 52-220 41-179 (1140)
129 TIGR00882 2A0105 oligosacchari 99.3 6.8E-11 1.5E-15 105.2 14.2 162 28-223 217-382 (396)
130 TIGR00879 SP MFS transporter, 99.3 9E-11 2E-15 104.8 15.0 158 42-223 300-457 (481)
131 PF11700 ATG22: Vacuole efflux 99.3 2E-10 4.3E-15 105.6 17.0 172 24-221 279-453 (477)
132 PRK11128 putative 3-phenylprop 99.3 8.5E-11 1.8E-15 104.3 14.2 150 34-222 12-165 (382)
133 TIGR00710 efflux_Bcr_CflA drug 99.3 1.2E-10 2.5E-15 102.2 14.9 162 28-219 208-369 (385)
134 TIGR00712 glpT glycerol-3-phos 99.3 6.1E-11 1.3E-15 107.2 13.4 164 27-222 252-419 (438)
135 TIGR00901 2A0125 AmpG-related 99.3 7.1E-11 1.5E-15 103.3 12.8 143 48-223 10-165 (356)
136 PRK11902 ampG muropeptide tran 99.3 1.5E-10 3.2E-15 103.4 15.1 157 34-223 7-169 (402)
137 PRK10091 MFS transport protein 99.3 1.2E-10 2.5E-15 103.4 14.3 161 29-223 202-363 (382)
138 TIGR00792 gph sugar (Glycoside 99.3 4.1E-11 9E-16 107.4 11.5 163 35-223 8-181 (437)
139 PF13347 MFS_2: MFS/sugar tran 99.3 9.5E-11 2.1E-15 105.6 13.7 165 26-216 225-389 (428)
140 PRK09848 glucuronide transport 99.3 4.4E-11 9.5E-16 108.4 11.3 165 26-215 228-392 (448)
141 COG2814 AraJ Arabinose efflux 99.2 1.8E-10 4E-15 102.7 14.6 164 24-224 209-374 (394)
142 TIGR00883 2A0106 metabolite-pr 99.2 1.8E-10 3.8E-15 100.6 14.4 123 75-223 48-178 (394)
143 COG2223 NarK Nitrate/nitrite t 99.2 1.1E-10 2.3E-15 103.9 12.4 168 20-221 8-178 (417)
144 PRK15402 multidrug efflux syst 99.2 3.6E-10 7.9E-15 100.7 15.5 160 27-216 216-375 (406)
145 PF07690 MFS_1: Major Facilita 99.2 8.4E-11 1.8E-15 101.4 10.9 141 31-202 211-352 (352)
146 TIGR01301 GPH_sucrose GPH fami 99.2 2.1E-10 4.5E-15 105.3 13.4 164 28-208 6-175 (477)
147 PRK10213 nepI ribonucleoside t 99.2 7.9E-10 1.7E-14 98.8 16.6 162 26-222 216-377 (394)
148 TIGR00894 2A0114euk Na(+)-depe 99.2 5.7E-10 1.2E-14 101.4 15.9 166 25-222 260-436 (465)
149 KOG3764 Vesicular amine transp 99.2 4.5E-11 9.6E-16 105.7 7.3 136 56-224 100-235 (464)
150 PRK10133 L-fucose transporter; 99.2 3.7E-10 8E-15 102.6 13.6 160 26-222 258-419 (438)
151 PF06609 TRI12: Fungal trichot 99.2 4.9E-10 1.1E-14 105.0 14.5 141 47-223 64-204 (599)
152 TIGR00887 2A0109 phosphate:H+ 99.2 3.2E-10 7E-15 104.4 12.5 146 35-211 297-454 (502)
153 PRK15034 nitrate/nitrite trans 99.2 1.2E-09 2.5E-14 100.0 15.7 174 26-220 252-438 (462)
154 TIGR00901 2A0125 AmpG-related 99.2 1.6E-09 3.4E-14 94.8 16.0 144 28-195 211-355 (356)
155 PLN00028 nitrate transmembrane 99.1 8.1E-10 1.8E-14 101.3 13.4 161 29-223 255-420 (476)
156 PRK11902 ampG muropeptide tran 99.1 1.4E-09 3.1E-14 97.0 14.2 143 47-223 230-377 (402)
157 PRK10054 putative transporter; 99.1 6.1E-10 1.3E-14 99.6 11.6 164 26-223 206-371 (395)
158 KOG0255 Synaptic vesicle trans 99.1 4.9E-10 1.1E-14 103.5 10.9 132 54-222 110-241 (521)
159 PRK10077 xylE D-xylose transpo 99.1 4.6E-09 1E-13 95.3 16.4 148 44-222 289-443 (479)
160 PRK08633 2-acyl-glycerophospho 99.1 2.2E-09 4.7E-14 107.4 15.4 150 26-209 232-382 (1146)
161 COG0738 FucP Fucose permease [ 99.1 4.7E-09 1E-13 93.2 15.2 146 34-210 20-165 (422)
162 PF00854 PTR2: POT family; In 99.1 2.4E-10 5.2E-15 101.4 7.2 111 93-224 1-111 (372)
163 PF05977 MFS_3: Transmembrane 99.1 3.4E-09 7.5E-14 98.5 15.0 166 24-222 11-176 (524)
164 KOG2615 Permease of the major 99.1 6.5E-10 1.4E-14 98.0 9.5 116 60-210 66-181 (451)
165 PRK11646 multidrug resistance 99.1 1.8E-09 3.9E-14 96.7 12.5 134 45-212 227-360 (400)
166 TIGR00886 2A0108 nitrite extru 99.1 2E-09 4.4E-14 93.9 12.5 140 28-198 227-366 (366)
167 KOG4686 Predicted sugar transp 99.1 2.2E-09 4.8E-14 91.8 11.8 155 23-213 261-416 (459)
168 PRK09669 putative symporter Ya 99.1 1.7E-09 3.8E-14 97.9 12.0 162 28-215 231-392 (444)
169 KOG2533 Permease of the major 99.1 1E-09 2.2E-14 101.1 10.5 138 53-224 72-215 (495)
170 PRK09669 putative symporter Ya 99.0 1.5E-09 3.2E-14 98.4 10.9 164 33-222 16-190 (444)
171 TIGR00889 2A0110 nucleoside tr 99.0 5E-09 1.1E-13 94.5 14.2 155 29-215 5-160 (418)
172 PRK06814 acylglycerophosphoeth 99.0 2.8E-09 6E-14 107.0 13.4 178 26-220 225-406 (1140)
173 TIGR00885 fucP L-fucose:H+ sym 99.0 5.8E-09 1.3E-13 94.0 14.2 159 27-222 233-398 (410)
174 PRK10429 melibiose:sodium symp 99.0 2E-09 4.4E-14 98.5 11.4 167 26-215 231-397 (473)
175 PF05977 MFS_3: Transmembrane 99.0 6.4E-09 1.4E-13 96.7 13.7 164 26-223 218-381 (524)
176 TIGR00903 2A0129 major facilit 99.0 9.1E-09 2E-13 91.5 14.0 154 26-220 192-349 (368)
177 TIGR00788 fbt folate/biopterin 99.0 5.4E-09 1.2E-13 95.8 12.5 163 29-223 29-196 (468)
178 PRK10429 melibiose:sodium symp 99.0 4.7E-09 1E-13 96.0 11.6 147 33-206 13-164 (473)
179 COG2807 CynX Cyanate permease 99.0 3.6E-08 7.8E-13 86.6 16.0 160 26-219 208-368 (395)
180 PRK10473 multidrug efflux syst 99.0 1.4E-08 3E-13 90.0 13.8 71 43-114 220-290 (392)
181 COG2270 Permeases of the major 99.0 1.2E-08 2.6E-13 91.1 13.2 160 26-219 252-412 (438)
182 KOG2532 Permease of the major 98.9 1.1E-08 2.3E-13 93.9 12.4 165 26-224 258-435 (466)
183 KOG0252 Inorganic phosphate tr 98.9 2.1E-09 4.5E-14 96.8 7.4 177 24-223 36-233 (538)
184 PRK11195 lysophospholipid tran 98.9 7.4E-08 1.6E-12 86.1 17.0 147 39-220 218-364 (393)
185 PRK11043 putative transporter; 98.9 4.7E-08 1E-12 86.9 15.6 145 37-212 214-358 (401)
186 KOG0569 Permease of the major 98.9 2.7E-08 5.9E-13 91.2 13.8 128 65-223 63-192 (485)
187 PRK11102 bicyclomycin/multidru 98.9 5.2E-08 1.1E-12 85.6 14.9 149 28-207 196-345 (377)
188 TIGR00898 2A0119 cation transp 98.9 7.6E-09 1.6E-13 94.8 9.9 118 69-220 362-479 (505)
189 PRK11462 putative transporter; 98.9 2.5E-08 5.5E-13 91.2 13.1 150 33-208 16-169 (460)
190 KOG2504 Monocarboxylate transp 98.9 1.4E-08 3.1E-13 94.0 11.4 159 30-223 46-208 (509)
191 TIGR02718 sider_RhtX_FptX side 98.8 6.6E-08 1.4E-12 85.8 13.8 164 29-223 4-171 (390)
192 COG2211 MelB Na+/melibiose sym 98.8 3.4E-08 7.4E-13 90.0 11.9 165 26-215 236-400 (467)
193 KOG2325 Predicted transporter/ 98.8 3E-08 6.5E-13 90.6 11.4 159 17-205 25-185 (488)
194 KOG2504 Monocarboxylate transp 98.8 5.5E-08 1.2E-12 90.2 12.9 163 26-223 298-463 (509)
195 PRK11652 emrD multidrug resist 98.8 1.6E-07 3.5E-12 83.3 15.0 143 42-216 223-365 (394)
196 PF13347 MFS_2: MFS/sugar tran 98.8 1.4E-08 2.9E-13 91.6 8.1 163 35-222 10-184 (428)
197 PF00083 Sugar_tr: Sugar (and 98.8 3.6E-10 7.8E-15 101.9 -2.6 130 63-223 47-179 (451)
198 KOG0253 Synaptic vesicle trans 98.8 9.6E-08 2.1E-12 84.4 11.3 146 26-205 326-490 (528)
199 PRK11462 putative transporter; 98.7 2.3E-07 5E-12 84.9 13.9 156 34-215 236-391 (460)
200 KOG0569 Permease of the major 98.7 6.7E-07 1.5E-11 82.1 15.5 163 25-214 268-433 (485)
201 PRK09848 glucuronide transport 98.7 2.9E-07 6.2E-12 83.4 13.2 151 33-208 15-174 (448)
202 PF03825 Nuc_H_symport: Nucleo 98.7 7.6E-07 1.7E-11 80.3 15.7 162 26-216 207-369 (400)
203 COG2807 CynX Cyanate permease 98.6 1.2E-06 2.5E-11 77.3 13.7 153 34-223 20-173 (395)
204 PF03209 PUCC: PUCC protein; 98.6 1.7E-06 3.7E-11 77.3 14.2 146 35-210 217-362 (403)
205 PF01306 LacY_symp: LacY proto 98.6 1.7E-07 3.6E-12 84.5 7.9 75 26-101 7-81 (412)
206 COG2211 MelB Na+/melibiose sym 98.5 8.6E-07 1.9E-11 80.9 11.7 157 26-208 12-172 (467)
207 PRK15403 multidrug efflux syst 98.5 3.6E-06 7.7E-11 75.8 13.6 162 26-218 218-379 (413)
208 COG0738 FucP Fucose permease [ 98.5 1.8E-06 3.8E-11 77.0 10.9 158 25-219 235-392 (422)
209 PF03825 Nuc_H_symport: Nucleo 98.4 6.7E-06 1.5E-10 74.2 13.9 116 31-171 7-122 (400)
210 PF12832 MFS_1_like: MFS_1 lik 98.4 4.3E-06 9.3E-11 58.0 9.4 69 33-103 7-75 (77)
211 PF01306 LacY_symp: LacY proto 98.4 7E-06 1.5E-10 74.1 13.3 166 25-224 219-388 (412)
212 COG0477 ProP Permeases of the 98.4 2E-05 4.3E-10 64.6 14.9 143 47-221 23-170 (338)
213 TIGR00924 yjdL_sub1_fam amino 98.4 7.7E-06 1.7E-10 75.2 13.2 166 32-221 278-453 (475)
214 PF05631 DUF791: Protein of un 98.3 2.1E-05 4.5E-10 69.4 14.8 139 54-222 61-202 (354)
215 PF06813 Nodulin-like: Nodulin 98.2 2.6E-05 5.7E-10 65.9 11.4 111 41-171 17-127 (250)
216 KOG2533 Permease of the major 98.2 1.4E-05 3.1E-10 73.9 10.4 162 26-219 273-439 (495)
217 PF03092 BT1: BT1 family; Int 98.1 2.9E-05 6.2E-10 70.7 11.3 147 48-222 11-161 (433)
218 TIGR00788 fbt folate/biopterin 98.1 4.5E-06 9.7E-11 76.6 5.6 137 52-213 278-415 (468)
219 KOG0253 Synaptic vesicle trans 98.1 3.1E-05 6.6E-10 68.9 10.4 141 45-221 96-236 (528)
220 TIGR00805 oat sodium-independe 98.0 0.00019 4.1E-09 68.5 14.7 82 26-108 330-414 (633)
221 PF03137 OATP: Organic Anion T 98.0 9.7E-07 2.1E-11 82.5 -0.8 156 40-209 16-201 (539)
222 PF00083 Sugar_tr: Sugar (and 98.0 2.6E-08 5.7E-13 89.8 -11.6 158 27-213 253-413 (451)
223 KOG3764 Vesicular amine transp 98.0 7.5E-06 1.6E-10 73.1 4.0 168 28-221 272-439 (464)
224 PRK10207 dipeptide/tripeptide 97.9 0.00024 5.1E-09 65.7 13.8 147 37-208 280-438 (489)
225 PF06609 TRI12: Fungal trichot 97.9 0.00022 4.9E-09 67.3 12.9 153 24-208 308-464 (599)
226 KOG0254 Predicted transporter 97.8 0.00036 7.9E-09 64.6 13.0 88 24-114 292-380 (513)
227 PRK09584 tppB putative tripept 97.8 0.00055 1.2E-08 63.4 14.0 145 37-206 283-439 (500)
228 KOG3626 Organic anion transpor 97.8 5.1E-05 1.1E-09 72.6 7.2 170 26-209 96-297 (735)
229 KOG2563 Permease of the major 97.7 0.00063 1.4E-08 61.8 12.7 131 51-210 69-201 (480)
230 KOG2816 Predicted transporter 97.6 0.00055 1.2E-08 62.9 11.2 116 71-223 71-186 (463)
231 KOG4686 Predicted sugar transp 97.6 1.7E-06 3.6E-11 74.4 -4.9 136 46-211 63-198 (459)
232 KOG0637 Sucrose transporter an 97.6 7.6E-05 1.6E-09 67.7 5.1 167 26-208 32-202 (498)
233 PF11700 ATG22: Vacuole efflux 97.5 0.0026 5.7E-08 58.7 14.0 119 65-206 73-209 (477)
234 PF05978 UNC-93: Ion channel r 97.4 0.0081 1.7E-07 47.2 13.2 112 60-206 35-146 (156)
235 TIGR01301 GPH_sucrose GPH fami 97.4 0.0042 9.2E-08 57.4 13.4 190 22-222 254-457 (477)
236 PF03209 PUCC: PUCC protein; 97.4 0.002 4.3E-08 57.9 10.8 140 53-213 6-153 (403)
237 COG2270 Permeases of the major 97.4 0.0011 2.3E-08 59.9 8.7 128 44-202 33-168 (438)
238 KOG2615 Permease of the major 97.3 0.0021 4.5E-08 57.5 10.1 150 29-211 263-414 (451)
239 PF06779 DUF1228: Protein of u 97.2 0.0036 7.8E-08 44.1 8.7 67 46-114 12-78 (85)
240 KOG0252 Inorganic phosphate tr 97.2 0.00027 5.8E-09 64.4 3.2 169 26-224 304-486 (538)
241 PF03137 OATP: Organic Anion T 97.1 0.00014 3E-09 68.1 0.0 175 29-212 308-515 (539)
242 KOG3762 Predicted transporter 97.0 0.0036 7.8E-08 58.2 8.2 153 35-222 380-533 (618)
243 PTZ00207 hypothetical protein; 96.8 0.0088 1.9E-07 56.7 10.1 146 27-209 354-512 (591)
244 PRK15462 dipeptide/tripeptide 96.8 0.033 7.1E-07 51.8 13.6 143 40-208 282-437 (493)
245 KOG2816 Predicted transporter 96.7 0.015 3.3E-07 53.5 10.2 127 48-209 263-390 (463)
246 KOG0255 Synaptic vesicle trans 96.5 0.08 1.7E-06 48.9 13.7 106 74-210 362-467 (521)
247 KOG1330 Sugar transporter/spin 96.4 0.025 5.5E-07 51.7 9.7 133 54-215 275-417 (493)
248 PRK03612 spermidine synthase; 96.4 0.19 4.1E-06 47.1 15.7 140 44-214 32-175 (521)
249 PF01770 Folate_carrier: Reduc 96.4 0.047 1E-06 49.5 11.0 129 45-208 22-152 (412)
250 TIGR00769 AAA ADP/ATP carrier 96.1 0.17 3.7E-06 46.8 13.6 165 25-209 6-189 (472)
251 KOG3762 Predicted transporter 96.1 0.0073 1.6E-07 56.2 4.2 69 36-106 21-89 (618)
252 TIGR01272 gluP glucose/galacto 96.0 0.0099 2.1E-07 51.6 4.7 63 138-209 8-70 (310)
253 KOG2563 Permease of the major 95.9 0.032 6.9E-07 50.9 7.3 152 30-213 270-423 (480)
254 KOG3626 Organic anion transpor 95.6 0.023 5E-07 54.8 5.9 79 28-106 394-474 (735)
255 PF06963 FPN1: Ferroportin1 (F 95.6 1.3 2.8E-05 40.6 16.8 137 45-206 277-413 (432)
256 KOG2325 Predicted transporter/ 95.4 0.016 3.4E-07 53.6 3.9 192 20-220 256-459 (488)
257 KOG4332 Predicted sugar transp 94.2 0.021 4.5E-07 49.3 1.2 94 51-170 61-155 (454)
258 PF06963 FPN1: Ferroportin1 (F 93.7 5.6 0.00012 36.4 16.8 74 27-101 3-76 (432)
259 KOG3574 Acetyl-CoA transporter 93.3 0.71 1.5E-05 41.8 9.1 158 21-204 26-188 (510)
260 COG3104 PTR2 Dipeptide/tripept 92.1 2.8 6.2E-05 38.9 11.7 139 44-206 302-451 (498)
261 COG3202 ATP/ADP translocase [E 91.8 4.6 9.9E-05 37.6 12.6 170 19-211 20-210 (509)
262 KOG3098 Uncharacterized conser 90.5 9.8 0.00021 35.2 13.6 108 73-198 290-401 (461)
263 KOG3098 Uncharacterized conser 90.0 2.9 6.2E-05 38.6 9.7 83 65-173 53-135 (461)
264 PF02487 CLN3: CLN3 protein; 87.8 3.4 7.4E-05 37.5 8.5 61 139-208 334-394 (402)
265 KOG3097 Predicted membrane pro 85.9 17 0.00036 32.5 11.3 151 23-206 26-182 (390)
266 TIGR00939 2a57 Equilibrative N 85.8 10 0.00022 34.8 10.6 55 141-204 373-427 (437)
267 TIGR00880 2_A_01_02 Multidrug 82.1 15 0.00034 26.0 10.6 44 64-108 89-132 (141)
268 PF01770 Folate_carrier: Reduc 78.8 39 0.00085 30.8 11.4 97 65-193 288-384 (412)
269 KOG0637 Sucrose transporter an 76.5 22 0.00047 33.1 9.0 90 22-112 275-381 (498)
270 COG5336 Uncharacterized protei 75.1 14 0.00029 27.2 6.0 31 73-103 53-83 (116)
271 TIGR00769 AAA ADP/ATP carrier 75.0 72 0.0016 29.7 14.8 151 58-218 157-336 (472)
272 KOG4332 Predicted sugar transp 73.3 11 0.00023 33.0 5.9 145 23-198 246-393 (454)
273 PF03092 BT1: BT1 family; Int 71.8 4 8.6E-05 37.2 3.3 130 59-213 252-382 (433)
274 TIGR00806 rfc RFC reduced fola 69.7 35 0.00077 32.0 8.9 97 65-193 301-397 (511)
275 KOG4830 Predicted sugar transp 68.8 7.1 0.00015 33.8 3.9 62 34-97 25-95 (412)
276 KOG1479 Nucleoside transporter 66.3 44 0.00096 30.4 8.6 118 38-173 255-376 (406)
277 PF02694 UPF0060: Uncharacteri 65.7 51 0.0011 24.2 7.3 53 59-112 51-103 (107)
278 PF01733 Nucleoside_tran: Nucl 63.9 2.5 5.5E-05 36.6 0.3 33 141-173 249-281 (309)
279 PF11947 DUF3464: Protein of u 58.1 37 0.00079 26.6 5.8 91 83-200 55-145 (153)
280 PF03219 TLC: TLC ATP/ADP tran 55.2 69 0.0015 29.9 8.2 120 75-210 72-205 (491)
281 PF09527 ATPase_gene1: Putativ 53.5 53 0.0012 20.5 6.8 30 72-101 10-39 (55)
282 PRK02237 hypothetical protein; 53.3 33 0.00071 25.2 4.5 49 62-111 56-104 (109)
283 KOG1479 Nucleoside transporter 47.9 2.2E+02 0.0048 26.0 13.4 34 139-173 116-149 (406)
284 KOG3810 Micronutrient transpor 46.7 1.7E+02 0.0036 26.7 8.7 95 67-193 276-370 (433)
285 KOG3574 Acetyl-CoA transporter 42.7 2.5E+02 0.0054 26.0 9.2 54 157-219 386-439 (510)
286 PF02487 CLN3: CLN3 protein; 42.5 2.2E+02 0.0048 25.9 9.1 79 67-171 64-142 (402)
287 PF00854 PTR2: POT family; In 42.3 1.6E+02 0.0034 25.8 8.1 78 35-113 40-122 (372)
288 PRK11469 hypothetical protein; 41.7 1.8E+02 0.004 23.3 9.7 52 58-110 130-182 (188)
289 PF07672 MFS_Mycoplasma: Mycop 40.6 2.4E+02 0.0051 24.2 8.7 28 70-97 149-176 (267)
290 COG3086 RseC Positive regulato 36.3 2E+02 0.0043 22.4 6.6 42 57-99 67-108 (150)
291 COG1268 BioY Uncharacterized c 31.9 1.3E+02 0.0027 24.4 5.2 20 70-89 90-109 (184)
292 KOG4830 Predicted sugar transp 31.3 40 0.00087 29.4 2.4 118 31-173 206-326 (412)
293 PRK11375 allantoin permease; P 30.5 2E+02 0.0043 26.7 7.1 34 56-89 54-87 (484)
294 TIGR02230 ATPase_gene1 F0F1-AT 30.0 2.2E+02 0.0047 20.6 6.3 17 79-95 59-75 (100)
295 PF11872 DUF3392: Protein of u 28.5 2.4E+02 0.0052 20.7 6.7 30 29-58 52-81 (106)
296 TIGR00926 2A1704 Peptide:H+ sy 28.4 5.6E+02 0.012 24.9 10.5 23 67-89 25-47 (654)
297 TIGR00939 2a57 Equilibrative N 25.7 5.2E+02 0.011 23.6 9.0 31 140-171 106-136 (437)
298 KOG3827 Inward rectifier K+ ch 24.8 1E+02 0.0023 27.8 3.9 39 23-61 60-98 (400)
299 PF02632 BioY: BioY family; I 21.9 2.5E+02 0.0054 21.6 5.2 23 70-93 61-83 (148)
300 PF12670 DUF3792: Protein of u 20.9 3.4E+02 0.0074 19.8 11.3 41 58-101 33-73 (116)
No 1
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.92 E-value=5.2e-25 Score=198.06 Aligned_cols=175 Identities=27% Similarity=0.430 Sum_probs=162.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcC----CchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYN----MKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIG 97 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~ 97 (225)
-+|+|.++.++..+++|+++||++...+..|++.+++ +|++++......+.......++++||++||++|+||++.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 4578999999999999999999999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCc
Q 041538 98 FGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKS 177 (225)
Q Consensus 98 ~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~ 177 (225)
.+.++..+|+++++... ......+++++.++++|.|..+++..+++.|++|++|++
T Consensus 97 lGail~~iGh~~L~~~~----------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-- 152 (498)
T COG3104 97 LGAILMAIGHLVLAISS----------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-- 152 (498)
T ss_pred HHHHHHHHHHHHHhccc----------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc--
Confidence 99999999999998752 123556999999999999999999999999999999864
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhccC
Q 041538 178 KSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAAIM 225 (225)
Q Consensus 178 ~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~~~ 225 (225)
|..+|+.+|.+.|+|+.++|.+++++.++.||+.+|.++++.|
T Consensus 153 -----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm 195 (498)
T COG3104 153 -----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGM 195 (498)
T ss_pred -----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999887653
No 2
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.90 E-value=1e-22 Score=187.20 Aligned_cols=171 Identities=18% Similarity=0.348 Sum_probs=153.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
++|+|.++.++..++++++++|++..+++.|+++++|+++.++.++.+.+.....+.++++|+++||++||||++..+.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999993499999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
++.++.+++.+..+ ....+++++.++++|.|...++..+++.|+||++++
T Consensus 90 ~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~------- 139 (489)
T PRK10207 90 VLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP------- 139 (489)
T ss_pred HHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch-------
Confidence 99999988887541 123466788999999999999999999999998763
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+|++.++++|.+.|+|+.+||.+++++.++.||++.|++.+
T Consensus 140 ~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~ 180 (489)
T PRK10207 140 RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCG 180 (489)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHH
Confidence 26888999999999999999999999999999999998764
No 3
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=2.3e-21 Score=177.85 Aligned_cols=171 Identities=24% Similarity=0.405 Sum_probs=148.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
+|+|.++.++..++++++.+|++..++|.|+++++|+++.+++.+...+.....++++++|+++||++||||++.++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 47788999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++.+++.... .....+++++.+..+|.|...++.+++++|+||++++ .
T Consensus 86 ~~lg~lll~~~~-----------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~-------~ 135 (493)
T PRK15462 86 MAIGHVVLGASE-----------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP-------R 135 (493)
T ss_pred HHHHHHHHHHhh-----------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc-------c
Confidence 988887665322 0122345556666778888888889999999998753 2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|.++++++|...|+|+.++|.+++++.++.||+++|.+.++
T Consensus 136 R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 136 RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 89999999999999999999999999988999999987654
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=1.3e-20 Score=172.48 Aligned_cols=172 Identities=22% Similarity=0.373 Sum_probs=152.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCRE--YNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFG 99 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (225)
.+++|.++.+.+.++++++++|++.+++|.|++++ +|+++.+++.+.+.+.....++++++|+++||++||||++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 35667888888899999999999999999999987 9999999999999999999999999999999933999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.++..++..++.+.. +...+++++.+.+++.|...++..++++|++|++++
T Consensus 86 ~~~~~~g~~~~~~~~------------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~----- 136 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM----- 136 (475)
T ss_pred HHHHHHHHHHHHhcc------------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc-----
Confidence 999999888777643 234577788889999999999999999999997652
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.|+++++++|...|+|+.+||.+.+++.++.||++.|.+.++
T Consensus 137 -~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~ 179 (475)
T TIGR00924 137 -PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAV 179 (475)
T ss_pred -ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 2278889999999999999999999999998899999987654
No 5
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=1.4e-19 Score=166.86 Aligned_cols=171 Identities=22% Similarity=0.411 Sum_probs=146.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
+++|.++.+++.++++++.+|++..+++.|+++++|++++++.++...+.......++++|+++||++|||+++..+.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999988888877777777789999999933999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++..++.++. .....+++++.+.+++.|...+...+++.|++|++++ .
T Consensus 98 ~~ig~~l~~~~~-----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~-------~ 147 (500)
T PRK09584 98 LAIGYALVAWSG-----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP-------R 147 (500)
T ss_pred HHHHHHHHHHhc-----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch-------h
Confidence 888887776643 1234466778889999999889999999999997653 2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|++.++++|...++|+.+||.+.+++.++.||++.|.+.++
T Consensus 148 ~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 148 LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 66778899999999999999999999999999999987653
No 6
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.75 E-value=3e-17 Score=153.00 Aligned_cols=201 Identities=41% Similarity=0.765 Sum_probs=176.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHH
Q 041538 21 PKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGC 100 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~ 100 (225)
+...|+....+++.+.+++.+++++..++..|++..+|.+..++...++.+.......++++++++|.++||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccccc-cccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 101 ITCLLGMVLLWLTTIFPHARPLACDYT-LRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 101 ~~~~i~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
++..+|..++.+....+.+.++.|.+. ..+.|.........+++.++.+.++|.|+..++..++.+||++..++ ++
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~---~~ 188 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDP---VE 188 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCc---ch
Confidence 999999999998888888777766211 22256555666778899999999999999999999999999995554 33
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhcc
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAAI 224 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~~ 224 (225)
++.+.+.|.|+|+..++|..++..+..+++++.||..+|.+..+.
T Consensus 189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred hhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 445679999999999999999999999999999999999887654
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.70 E-value=3.4e-16 Score=140.61 Aligned_cols=166 Identities=13% Similarity=0.040 Sum_probs=136.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
.+|+.++...+..+++....... ....+.+++++|+++++.+++.+.+.++..+++++.|+++||+ ||||++..+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 34555555555555555554444 4444578999999999999999999999999999999999998 999999999888
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++..+..++. +...+++.+.+.|++.+...+....++.|.+|+++
T Consensus 83 ~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~--------- 129 (412)
T TIGR02332 83 WGIASTATMFAT------------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF--------- 129 (412)
T ss_pred HHHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH---------
Confidence 888888877755 35568889999999999988888889999999844
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheec------ccCcchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQD------NLGWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~------~~g~~~~f~~~~~ 223 (225)
|++..+.++...++|..+++.+.+++.+ ..|||+.|.+.++
T Consensus 130 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~ 176 (412)
T TIGR02332 130 RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGF 176 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHH
Confidence 8999999999999999999999998753 3699999987653
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.70 E-value=2e-16 Score=142.81 Aligned_cols=158 Identities=11% Similarity=0.140 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLL 110 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l 110 (225)
.++..+......+.....+|.+.+ ++|+++.+.+++.+.+.+...+++++.|+++||+ |||+++.++.++..++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLA-DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHH
Confidence 333444444444455566665554 6999999999999999999999999999999998 99999999988888888777
Q ss_pred HHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHH
Q 041538 111 WLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWY 190 (225)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~ 190 (225)
.+.. +...+++.+++.+++.|...+....++.|++|+++ |++..+++
T Consensus 106 ~~~~------------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~---------rg~~~~~~ 152 (434)
T PRK11663 106 GFSS------------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE---------RGGWWAIW 152 (434)
T ss_pred HHHh------------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH---------HHHHHHHH
Confidence 6654 34557777888888888888889999999999855 89999999
Q ss_pred HHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 191 YVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 191 ~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+...++|+.++|.+.+++.+++||++.|.+.++
T Consensus 153 ~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i 185 (434)
T PRK11663 153 NTAHNVGGALIPLVVGAIALHYGWRYGMMIAGI 185 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 999999999999999999888999999987553
No 9
>PRK10054 putative transporter; Provisional
Probab=99.70 E-value=7.2e-16 Score=137.80 Aligned_cols=164 Identities=16% Similarity=0.200 Sum_probs=136.9
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
+|.++...+..++...+++...++++.|+++++|+++.+.+++.+...+...+.+++.|+++||+ ||||++..+.+...
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 35677777788888889898999999999999999999999999999999999999999999997 99999998888887
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++..++.+.+ +...+++.+.+.+.+.+...+.......|.+|+++ |+
T Consensus 85 ~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~ 131 (395)
T PRK10054 85 SGFIAIPLVN------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS---------KT 131 (395)
T ss_pred HHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH---------HH
Confidence 7777666654 23445555666666666667778888899988744 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.+++.+...++|..++|.+.+++.+ .||+..|.+.++
T Consensus 132 ~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~ 169 (395)
T PRK10054 132 KIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAI 169 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHH
Confidence 99999999999999999999998875 699999886553
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.69 E-value=7e-16 Score=137.82 Aligned_cols=167 Identities=11% Similarity=0.119 Sum_probs=138.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
|.+|+.+..+....+......|.....+|. +.+++|+++.+.++..+.......+++++.|+++||+ ||||.+..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHH
Confidence 446665555555545555555555666666 4558999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..++.++..+.. +...+++.+++.|++.+...+...+++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~-------- 141 (394)
T PRK10213 94 LLTLSCLLVSFAN------------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT-------- 141 (394)
T ss_pred HHHHHHHHHHHHC------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH--------
Confidence 9888877766543 46678999999999999999999999999998755
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|+...+......++|..++|.+++++.+++||++.|++.++
T Consensus 142 -~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 182 (394)
T PRK10213 142 -VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV 182 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 89999999999999999999999999998999999987543
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.68 E-value=1.1e-15 Score=132.05 Aligned_cols=157 Identities=21% Similarity=0.300 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~ 112 (225)
+..++...........+|.++.+++|.++.+.+++.+...+...+++++.|+++||+ ||||++..+.++..++.....+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 345556666666666677688889999999999999999999999999999999997 9999999999988888544444
Q ss_pred hhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 041538 113 TTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV 192 (225)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~ 192 (225)
+. +...+++.+++.|++.+...+....++.|.+|+++ |++.++..+.
T Consensus 82 ~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~ 128 (352)
T PF07690_consen 82 AS------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE---------RGRAFGILSA 128 (352)
T ss_dssp HC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC---------HHHHHHHHHH
T ss_pred hh------------------------hHHHHhhhccccccccccccccccccccccchhhh---------hhhccccccc
Confidence 32 23378999999999999999999999999999965 8999999999
Q ss_pred HHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 193 SVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 193 ~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
..++|..++|.+++++.++.+|++.|++.++
T Consensus 129 ~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 129 GFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hhhhhhhcccchhhhhhhccccccccccccc
Confidence 9999999999999999988999999987654
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.68 E-value=6.9e-16 Score=136.99 Aligned_cols=164 Identities=10% Similarity=0.060 Sum_probs=133.1
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
|..++.+.+..+......+...+.+| .+.+++|.++.+.++..+.+.+...+++++.|+++||+ ||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 33344444444544444443333344 56778999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++.....+.. +...+++.+.+.|++.+...+...+++.|.+|+++ |+
T Consensus 86 ~~~~~~~~~~------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~---------r~ 132 (390)
T PRK03545 86 ASHVLSALAW------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK---------KA 132 (390)
T ss_pred HHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh---------hh
Confidence 8887777654 45668888999999988888888999999999855 88
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+..++.....++|..++|.+.+.+.++.||++.|++.++
T Consensus 133 ~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 171 (390)
T PRK03545 133 QALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGG 171 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHH
Confidence 999999999999999999999999888899999987654
No 13
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.68 E-value=8.9e-16 Score=136.32 Aligned_cols=172 Identities=15% Similarity=0.092 Sum_probs=140.9
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
+|.+....+..+..........+.+|.|+++++|.|+.+.+++.+...+...+++++.|+++||+ ||||++..+.+++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 35566677788888888877888999999999999999999999999999999999999999998 99999999988877
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+.+...... ....+...+++.+++.|++.+...+.....+.|.+|+++ |+
T Consensus 93 ~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~ 147 (399)
T PRK05122 93 LSGLLYLLAGLLAA----------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH---------TG 147 (399)
T ss_pred HHHHHHHHhhhhhc----------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh---------hc
Confidence 76665554321000 001134568888999999999988888888999998755 78
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+..++.....++|..+||.+++++.++.||++.+.+..
T Consensus 148 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 185 (399)
T PRK05122 148 RVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIM 185 (399)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 88888888889999999999999988889998876543
No 14
>PRK10504 putative transporter; Provisional
Probab=99.68 E-value=9.2e-16 Score=139.30 Aligned_cols=161 Identities=12% Similarity=0.066 Sum_probs=136.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++.....+.+.+++|.+.+ ++|.++.+.+++.+.+.+...++.++.|+++||+ ||||++..+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 45666667777777787788888888776 6999999999999999999999999999999998 999999988877777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.+...+.. +...+++.+.+.|++.+...+.....+.|.+|+++ |++
T Consensus 88 ~~~~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~ 134 (471)
T PRK10504 88 GSLFCALSG------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ---------YMA 134 (471)
T ss_pred HHHHHHHhC------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH---------HHH
Confidence 776555433 34567888999999999988889999999998744 888
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
..+..+...++|..+||.+.+++.++.||++.|.+.
T Consensus 135 ~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 135 AMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 999999999999999999999999999999999864
No 15
>PRK12382 putative transporter; Provisional
Probab=99.68 E-value=1.3e-15 Score=135.14 Aligned_cols=170 Identities=15% Similarity=0.154 Sum_probs=135.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+.++...+..++.........+.+|.|+++++|+|+.+.+++.+.+.+...+.+++.|+++||+ ||||.+..+.+.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 4555565666677777777788889999999999999999999999999999999999999998 999999998877766
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..........+. ....+...+++.+.+.|++.+...+...+.+.|.+|+++ |++
T Consensus 94 ~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~ 148 (392)
T PRK12382 94 AGLAYLLAAILPV----------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH---------SGK 148 (392)
T ss_pred HHHHHHhhhcccc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc---------cch
Confidence 5543322211110 011245678889999999998888888888899998755 788
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
..++.+.+.++|..++|.+++++.+..||++.+.+.
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 184 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTT 184 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 888888889999999999999998888999876543
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.67 E-value=2.2e-15 Score=132.65 Aligned_cols=166 Identities=13% Similarity=0.133 Sum_probs=138.6
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
+.+|+.+....+..+...+..+...... +.+++++|+++.+.+++.+...+...++.++.|+++||+ ||||++..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVL-AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 4566766666677777777766555544 456788999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..++..++.+.. +...+++.+++.|++.+...+...+++.|.+|+++
T Consensus 86 ~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-------- 133 (405)
T TIGR00891 86 LFSAGTLACGFAP------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-------- 133 (405)
T ss_pred HHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh--------
Confidence 8888877766544 35567888999999999999999999999999855
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccC--cchhhhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG--WKVGFGIPA 222 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g--~~~~f~~~~ 222 (225)
|++..++.+...++|..+++.+.+.+.+..+ |++.|.+.+
T Consensus 134 -~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 175 (405)
T TIGR00891 134 -RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISI 175 (405)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHH
Confidence 7889999999999999999999998877665 998887654
No 17
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.67 E-value=5.9e-16 Score=146.52 Aligned_cols=163 Identities=24% Similarity=0.500 Sum_probs=139.3
Q ss_pred HHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 041538 40 MASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHA 119 (225)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~ 119 (225)
++||++...+..|+++.+|++.+++..+...+.....+.++++|+++|+++||+|++.++.+++.+|..++.+.. .+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 368999999999999999999999999999999999999999999999999999999999999999998888754 1110
Q ss_pred CCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhh
Q 041538 120 RPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSM 199 (225)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 199 (225)
.......+.++++.+.++|.|++.++..++..|+++++++ +.|.+.|.++|+++|+|+.
T Consensus 80 ---------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~------~~~~s~F~~fY~~iNiGSl 138 (654)
T TIGR00926 80 ---------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL------SLRSRFFSFFYFAINAGSL 138 (654)
T ss_pred ---------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch------hHHHHHHHHHHHHHHHHHH
Confidence 0012334577889999999999999999999999987543 4589999999999999999
Q ss_pred hHHHhhhheecc-------cCcchhhhhhhcc
Q 041538 200 VAVTFIVYIQDN-------LGWKVGFGIPAAI 224 (225)
Q Consensus 200 ~g~~l~~~l~~~-------~g~~~~f~~~~~~ 224 (225)
+++.+.+++.++ .+|..+|.+.+++
T Consensus 139 is~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~ 170 (654)
T TIGR00926 139 ISTIITPILRGDVGCFGCQDCYPLAFGVPAIL 170 (654)
T ss_pred HHHHHHHHHHHhhcccccCcchHHHHHHHHHH
Confidence 999999999744 3699999887764
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.67 E-value=1.3e-15 Score=139.89 Aligned_cols=163 Identities=13% Similarity=0.023 Sum_probs=135.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
..+..+.+..+........+...+|.. .+++|.+.++.+|+.+.+.+...+..++.|+++||+ |||+++..+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 334444556666666665555555654 568999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.++..++. +...+++++.++|+|.+...+.....+.+.+++++ .|++
T Consensus 84 ~~~~~~~a~------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~--------~r~~ 131 (495)
T PRK14995 84 ASLAAAFSP------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK--------QRNM 131 (495)
T ss_pred HHHHHHHcC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH--------HHHH
Confidence 988877654 45678899999999999888877777878775433 2899
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
..+++....++|..+||.+++++.++.|||+.|++..
T Consensus 132 ~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 132 ALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 9999999999999999999999999999999998643
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.66 E-value=2.4e-15 Score=134.51 Aligned_cols=165 Identities=15% Similarity=0.188 Sum_probs=137.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
.+++.+....+..+.+.+..+.. .+..+++++++|.++.+.+++.+...+...+++++.|+++||+ |||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34455555555555566655544 4444567789999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++.....+.. +...+++.+.+.|++.+...+....++.|.+|+++
T Consensus 93 ~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~--------- 139 (426)
T PRK12307 93 YSVGTGLSGLAS------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL--------- 139 (426)
T ss_pred HHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH---------
Confidence 888887777654 45668889999999999988999999999999855
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
|++..++.+.+.++|..+++.+.+.+.++.||++.|++..
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 7888899999999999999999999888899999987643
No 20
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.65 E-value=4.7e-15 Score=132.73 Aligned_cols=160 Identities=16% Similarity=0.204 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMV 108 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~ 108 (225)
.+.....++...+++.+.++++.|+++++|+|+.+.+.+.....+...+..+++|+++||+ ||||.+..+.+...++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 4556778888888888999999999999999999999999999999999999999999998 999999999988888887
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
.+...+ +...+++.+.+.+++.+...+...+++.|.+|+++ |++..+
T Consensus 92 ~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~a~~ 138 (400)
T PRK11646 92 TMAIAH------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ---------RGRFFS 138 (400)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHH
Confidence 766543 34557788888998888888888899999998755 899999
Q ss_pred HHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 189 WYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.+...++|..+||.+++++. ..||++.|++.++
T Consensus 139 ~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~ 172 (400)
T PRK11646 139 LLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAV 172 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 999999999999999999998 6799999886553
No 21
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.65 E-value=3.3e-15 Score=131.01 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=134.4
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
+|.++.+....+..........+.+| .+++++|.++.+.+++.+...+...+++++.|+++||+ ||||.+..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34444444455555555555555554 45678999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+.... +...+++.+++.+++.+...+...+++.|.+|+++ |+
T Consensus 82 ~~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~ 128 (385)
T TIGR00710 82 LSSLGLALSN------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE---------LS 128 (385)
T ss_pred HHHHHHHHHc------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH---------HH
Confidence 8877776644 35567888999999999988999999999999754 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+..+..+...++|..++|.+.+++.++.+|++.|.+.++
T Consensus 129 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 167 (385)
T TIGR00710 129 RIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSL 167 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 999999999999999999999999888899998876543
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.65 E-value=4.1e-15 Score=132.21 Aligned_cols=166 Identities=15% Similarity=0.076 Sum_probs=136.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
+.+|..+.......+.+....+......| .+.+++|+++.+.+++.+...++..+++++.|+++||+ ||||++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 34455555556677777776666555555 45568999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..++.+++.+.. +...+++.+.+.|++.+...+...+++.|.+|+++
T Consensus 89 ~~~~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~-------- 136 (406)
T PRK11551 89 LFGLFSLATAQAW------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL-------- 136 (406)
T ss_pred HHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH--------
Confidence 7777766655543 35567788999999998888889999999999855
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
|++..++.+...++|..+++.+.+.+.+..+|++.|++.+
T Consensus 137 -r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (406)
T PRK11551 137 -RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGG 176 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 8999999999999999999999988888889999887654
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.64 E-value=7.3e-15 Score=134.01 Aligned_cols=165 Identities=13% Similarity=0.140 Sum_probs=136.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
.+|+.+..+.+..+...+..+... ...+.+.+++|+++.+.++..+...+...++.++.|+++||+ ||||.+..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 445555555555555555555444 444567789999999999999999999999999999999998 999999999888
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++...+.+.. +...+++.+.+.|++.+...+....++.|.+|+++
T Consensus 95 ~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~--------- 141 (496)
T PRK03893 95 FSVGTLACGFAP------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL--------- 141 (496)
T ss_pred HHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH---------
Confidence 888887777654 35568888999999988888889999999999854
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
|+...+.++...++|..++|.+.+++.++.+|++.|.+.+
T Consensus 142 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~ 181 (496)
T PRK03893 142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGI 181 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 8888999999999999999999999999999999887643
No 24
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.64 E-value=3.3e-16 Score=140.06 Aligned_cols=166 Identities=14% Similarity=0.161 Sum_probs=146.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
.++.+....+++++++..-|.+.. .-.-.++.+|.++++.+.+.+...+...+++|++|+++||+ .|++++.++..++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW 108 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIW 108 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHH
Confidence 345566677788889988887655 44557889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++.+...+.. ..+.+.+.|.+.|+|.+.+.+..+++++|.||... |
T Consensus 109 ~~Av~~~~fs~------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~---------R 155 (493)
T KOG1330|consen 109 TLAVFASGFSN------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK---------R 155 (493)
T ss_pred HHHHHHHHHHH------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh---------h
Confidence 98888877765 45669999999999999999999999999999855 9
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhhcc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPAAI 224 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~~~ 224 (225)
++.++++|+...+|+++|-..+..+.++.+ |||+|...+++
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl 197 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVL 197 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHH
Confidence 999999999999999999999999988887 99999877654
No 25
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.64 E-value=5e-15 Score=134.34 Aligned_cols=160 Identities=15% Similarity=0.163 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
+..+.+..+............+ +.+.+++|.++.+.+++.+.+.+...++.++.|+++||+ ||||.+..+.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 3344445555555554444444 456668999999999999999999999999999999998 99999999999888888
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
+++.... +...+++.+.+.|++.+...+...+++.|.+|+++ |++..
T Consensus 82 ~~~~~~~------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~ 128 (485)
T TIGR00711 82 LLCGVAP------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK---------RGRAM 128 (485)
T ss_pred HHHhCcC------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH---------HHHHH
Confidence 7766543 45668889999999999999999999999999855 89999
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
++++....+|..++|.+.+++.++.||++.|++.+
T Consensus 129 ~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~ 163 (485)
T TIGR00711 129 AIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV 163 (485)
T ss_pred HHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence 99999999999999999999999999999987654
No 26
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.64 E-value=9.6e-15 Score=131.77 Aligned_cols=166 Identities=19% Similarity=0.181 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcC---CchhHHHH---HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYN---MKITEGTN---VLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~---~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
..+..+++.+.... .+...+++.++++ .+..+.+. +.....++..++++++|+++||+ ||||++..+.+++.
T Consensus 27 ~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~ 104 (432)
T PRK10406 27 ASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMC 104 (432)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHH
Confidence 33456666666554 5666677888874 55554333 33444445558999999999998 99999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++.+...+..+... .....+..+++.|+++|++.|...+....+++|.+|+++ |+
T Consensus 105 ~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~---------rg 159 (432)
T PRK10406 105 FGSLVIACLPGYET----------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR---------KG 159 (432)
T ss_pred HHHHHHhhcCCchh----------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc---------cc
Confidence 88888777542110 001234568889999999999999999999999999865 67
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhhee--------cccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQ--------DNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~--------~~~g~~~~f~~~~~ 223 (225)
...+..+...++|..+++.+...+. +.+|||+.|++.++
T Consensus 160 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~ 206 (432)
T PRK10406 160 FYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAV 206 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 7777777777777777776654442 25799999987654
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=99.63 E-value=7.1e-15 Score=128.80 Aligned_cols=163 Identities=14% Similarity=0.103 Sum_probs=131.2
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
++.+.......+......+.. ....+++.+++|+++.+.+++.+...+...++.++.|+++||+ |||+.+..+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 344444444444444444433 3444556678999999999999999999999999999999998 99999999888887
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++..++.+.. +...+++.+.+.+++.+...+...+++.|.+|+++ |+
T Consensus 94 ~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------r~ 140 (398)
T TIGR00895 94 VFTLLCALAT------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---------RG 140 (398)
T ss_pred HHHHHHHHcc------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh---------hc
Confidence 7776666543 34557788899999999999999999999999755 78
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+..++.+...++|..+++.+.+++.+..||+..|.+.+
T Consensus 141 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 178 (398)
T TIGR00895 141 TAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGG 178 (398)
T ss_pred hhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhh
Confidence 88999999999999999999999988899998887654
No 28
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.62 E-value=1.2e-14 Score=129.01 Aligned_cols=165 Identities=19% Similarity=0.238 Sum_probs=132.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
+.+|.++.......+.....+...+.+|. +.+++|.|+.+.+++.+...+...+++++.|+++||+ ||||.+..+.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 45677776666666666655555555554 5568999999999999999999999999999999998 999999999888
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++...+.... +...+++.+.+.|++.+...+....+..|.+++++
T Consensus 83 ~~~~~~~~~~~~------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------- 129 (394)
T PRK11652 83 FILGTLVALFAH------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ--------- 129 (394)
T ss_pred HHHHHHHHHHHc------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH---------
Confidence 888777666543 34567888899998888777777777888777644
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
++...+..+.+..++..++|.+.+++.++.||++.|++.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~ 169 (394)
T PRK11652 130 LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLL 169 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 7778888888899999999999999988889999888754
No 29
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.4e-14 Score=128.82 Aligned_cols=166 Identities=13% Similarity=0.106 Sum_probs=147.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
..+..++...+..|.....=+.....+|. +.+++|.|..++++.++.+..+..++.++...+.||+ .|||.++...++
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHH
Confidence 34455666666777766666666676666 4558999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
++++.++.+++. +..++.++|++.++..|..++...+...|+.|+++
T Consensus 88 Fi~~n~l~alAp------------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~--------- 134 (394)
T COG2814 88 FIVSNLLSALAP------------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK--------- 134 (394)
T ss_pred HHHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc---------
Confidence 999999999877 56779999999999999999999999999999977
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|+++.+....+.+++..+|..++.++.|.+|||..|+..+.
T Consensus 135 ~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~ 175 (394)
T COG2814 135 RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAV 175 (394)
T ss_pred hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHH
Confidence 89999999999999999999999999999999999987654
No 30
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.61 E-value=6.5e-15 Score=127.57 Aligned_cols=161 Identities=14% Similarity=0.069 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~ 112 (225)
...++...........+|.|.+ +++.++.+.+++.+...+...+++++.|+++||+ ||||++..+.++..++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHH
Confidence 4555555555556666677776 5799999999999999999999999999999998 9999999998887777766665
Q ss_pred hhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 041538 113 TTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV 192 (225)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~ 192 (225)
....+ +.+...+++.+.+.+++.+...+...+++.|.+|+++ |++..++.+.
T Consensus 84 ~~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 135 (365)
T TIGR00900 84 VALLG-------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ---------LTQANSLSQA 135 (365)
T ss_pred HHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HHHHHhHHHH
Confidence 44111 1245678888999999999999999999999999854 8999999999
Q ss_pred HHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 193 SVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 193 ~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
..++|..++|.+++++.++.||++.|++.++
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999888999998876543
No 31
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.61 E-value=2.2e-14 Score=125.27 Aligned_cols=158 Identities=16% Similarity=0.108 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+......+......+...+.+|.++++++|+|+.+.+++.+...+...+++++.|+++||+ ||||.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 44555566666667777778888789999999999999999999999999999999999998 99999999999888888
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
+.+.+.. .+...+++.+++.|++.+. .+...++++|.+|+++ |+...
T Consensus 82 ~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~---------r~~~~ 128 (366)
T TIGR00886 82 LWAGLAV-----------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI---------QGTAL 128 (366)
T ss_pred HHHHHHh-----------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh---------hhHHH
Confidence 7776543 0345577788888988654 4567788999999855 78888
Q ss_pred HHHHHHHhhhhhhHHHhhhheec----------ccCcchhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQD----------NLGWKVGFG 219 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~----------~~g~~~~f~ 219 (225)
+++....++|..+++.+.+.+.+ +.+|++.|+
T Consensus 129 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~ 170 (366)
T TIGR00886 129 GLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFV 170 (366)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhH
Confidence 88877777777777777665543 347998883
No 32
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=2.6e-14 Score=122.63 Aligned_cols=158 Identities=18% Similarity=0.305 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLL 110 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l 110 (225)
.....+......+......+.|.+ ++|.++.+.+++.....+...++.++.|+++||+ ||||.+..+.++..++...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHH
Confidence 344566777777777777777775 5699999999999999999999999999999998 99999999999888888877
Q ss_pred HHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHH
Q 041538 111 WLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWY 190 (225)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~ 190 (225)
.... +...+++.+.+.+++.+...+...+++.|.+|+++ |++.++..
T Consensus 82 ~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 128 (352)
T cd06174 82 AFAS------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE---------RGRALGLF 128 (352)
T ss_pred HHhc------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc---------hhhhhhHH
Confidence 7653 35668888999999999999999999999999855 88999999
Q ss_pred HHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 191 YVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 191 ~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+...++|..++|.+.+.+.++.+|++.|.+.++
T Consensus 129 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 129 SAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999988899998876553
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.60 E-value=1.9e-14 Score=127.67 Aligned_cols=163 Identities=12% Similarity=0.230 Sum_probs=134.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++......+......+...+.+|. +++++|++.++.++..+....+..+++++.|+++||+ ||||++..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 34445555666666665666666655 5668999999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.+++.++. +...+++.+.+.|++.+...+....++.|.+|+++ |++
T Consensus 81 ~~~l~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~ 127 (382)
T PRK10091 81 GNAMFTLSS------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK---------VTA 127 (382)
T ss_pred HHHHHHHhC------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH---------hhH
Confidence 888777654 45668888999999988877778888888888744 777
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
..+......++|..++|.+.+++.+..||++.|.+.++
T Consensus 128 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 128 AVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 88888888999999999999999888899999987654
No 34
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.6e-15 Score=134.62 Aligned_cols=162 Identities=15% Similarity=0.110 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHH---HHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNM---ILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l---~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+-+++..++...++|.+.-+. .+++.++.++|++|.+.+.+.+.+.+.++..+.|.++||. +.|+.+.++.++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 445667777888888874443 5888989999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
..+++.+.. +..++.+..++.|..+|.-.|.+...++.+||+++ |++
T Consensus 107 ~nil~Gfs~------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e---------RG~ 153 (448)
T COG2271 107 VNILFGFSP------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE---------RGT 153 (448)
T ss_pred HHHHHhhhh------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc---------cCc
Confidence 998888765 56778888899999999999999999999999977 899
Q ss_pred HHHHHHHHHhhhhhhHHHhh--hheecccCcchhhhhhhcc
Q 041538 186 YFSWYYVSVSASSMVAVTFI--VYIQDNLGWKVGFGIPAAI 224 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~--~~l~~~~g~~~~f~~~~~~ 224 (225)
..++++.+.|+|+++.|.++ +++..+.+|+.+|+.++++
T Consensus 154 ~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgii 194 (448)
T COG2271 154 WWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGII 194 (448)
T ss_pred eEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 99999999999999999999 8998888999999988764
No 35
>PRK03699 putative transporter; Provisional
Probab=99.60 E-value=3.3e-14 Score=126.58 Aligned_cols=165 Identities=15% Similarity=0.107 Sum_probs=131.5
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
++|..+.+.+..++.....+.+-..+|. +.+++|+|+.+.+++.+...++..+++++.|+++||+ ||||++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 3455555555555565555555555555 5568999999999999999999999999999999998 9999999998888
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++..++.+.. +...+++.+.+.+++.+...+...+.+.|.+|+++ |
T Consensus 83 ~i~~~l~~~~~------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~---------r 129 (394)
T PRK03699 83 ILAVAGLMFSH------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ---------R 129 (394)
T ss_pred HHHHHHHHHcc------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch---------H
Confidence 88877776643 45567888999999988888888899999998744 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhhee-cccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQ-DNLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~-~~~g~~~~f~~~~~ 223 (225)
+...+..+...++|+.++|.+.+++. ++.||++.|...++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~ 170 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGL 170 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 88888878888899999999988765 45699999976543
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=2.7e-14 Score=124.01 Aligned_cols=163 Identities=11% Similarity=0.063 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+......+...........+.+.|.+ ++|.++.+.+.......+...+++++.|+++||+ |||+.+.++.+...++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQ-SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 333333444444444445566667754 6889999999999999999999999999999998 99999988888777777
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++..... .....+.....+.+++.+...+..+.+..|.+|+++ |++..
T Consensus 285 ~~~~~~~~----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~---------~~~~~ 333 (377)
T TIGR00890 285 AAMLFIPM----------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN---------SAANY 333 (377)
T ss_pred HHHHHccc----------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh---------hhhHh
Confidence 66554330 112223344556677777777777888999999865 79999
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++.+...++|..++|.+.+++.++.||++.|.+.++
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~ 369 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGA 369 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHH
Confidence 999999999999999999999999999999887654
No 37
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.59 E-value=1.6e-14 Score=129.06 Aligned_cols=133 Identities=17% Similarity=0.281 Sum_probs=113.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccch
Q 041538 59 MKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGS 138 (225)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (225)
.+..+.+++.+.+.++..+++++.|+++||+ ||||++..+.++..++..+...... ..
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 125 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF---------------------AL 125 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc---------------------cc
Confidence 3489999999999999999999999999998 9999999999988888877755431 11
Q ss_pred hHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhh---hheecccCcc
Q 041538 139 QLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFI---VYIQDNLGWK 215 (225)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~---~~l~~~~g~~ 215 (225)
+...+++.+.+.|++.+...+....++.|.+|+++ |+...++++...++|..+++.+. ....+..+|+
T Consensus 126 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~ 196 (481)
T TIGR00879 126 SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL---------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWR 196 (481)
T ss_pred chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh---------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHH
Confidence 23468889999999999998999999999999866 78889999999999999999999 7776778999
Q ss_pred hhhhhhh
Q 041538 216 VGFGIPA 222 (225)
Q Consensus 216 ~~f~~~~ 222 (225)
+.|++.+
T Consensus 197 ~~f~~~~ 203 (481)
T TIGR00879 197 IPLGLQL 203 (481)
T ss_pred HHHHHHH
Confidence 9988643
No 38
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=6.5e-14 Score=124.79 Aligned_cols=165 Identities=9% Similarity=0.059 Sum_probs=116.7
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
++|..+......+.....++....+.|.|+++++|+++.+.+.+.....+...++.+++|+++||+ ||||.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 444444443444444445555667899999999999999999888777777888899999999998 9999887766555
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.+....+.... +...+...+.+.+++.+...+..+....|.+|+ + |
T Consensus 293 ~~~~~~~~~~~------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~---------~ 338 (393)
T PRK15011 293 VCFYAGMLMAH------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q---------A 338 (393)
T ss_pred HHHHHHHHHHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C---------c
Confidence 44433322221 233344455555555555555556677787774 3 5
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++..++++...++|..++|.+.|++.+++||+..|.+.++
T Consensus 339 g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~ 378 (393)
T PRK15011 339 GSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALV 378 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 7778888888899999999999999998899988876543
No 39
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.59 E-value=1.2e-14 Score=126.41 Aligned_cols=143 Identities=12% Similarity=0.107 Sum_probs=125.6
Q ss_pred HHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 041538 47 PNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDY 126 (225)
Q Consensus 47 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 126 (225)
....+++++++|+++.+.+++.+...+...++.++.|+++||+ ||||.+..+.++..++...+.+..
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 3344558889999999999999999999999999999999998 999999999888888887777654
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 127 TLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
+...+++.+.+.|++.+...+....++.|.+|+++ |++..++.+...++|..++|.+.+
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE---------RATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH---------HHHHHHHHHHhchHHHHHHHHHHH
Confidence 45668889999999999999999999999999855 899999999999999999999999
Q ss_pred heecccCcchhhhhhhc
Q 041538 207 YIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 207 ~l~~~~g~~~~f~~~~~ 223 (225)
++.++.+|++.|.+.++
T Consensus 140 ~l~~~~~~~~~~~~~~~ 156 (399)
T TIGR00893 140 WILIHFSWQWAFIIEGV 156 (399)
T ss_pred HHHHhCCchHHHHHHHH
Confidence 98888899999876543
No 40
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.59 E-value=3.4e-14 Score=126.71 Aligned_cols=150 Identities=18% Similarity=0.148 Sum_probs=121.9
Q ss_pred HHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCC
Q 041538 39 RMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPH 118 (225)
Q Consensus 39 ~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~ 118 (225)
........+.+|. +++++|.|+.+.++..+.+.++..+++++.|+++||+ ||||.+..+.+...++........
T Consensus 26 ~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---- 99 (406)
T PRK15402 26 YIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ---- 99 (406)
T ss_pred HhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc----
Confidence 3344444555554 5578999999999999999999999999999999998 999999999888887777666544
Q ss_pred CCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhh
Q 041538 119 ARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASS 198 (225)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 198 (225)
+...+++.+.+.|++.+...+...+.+.|.+|+++ |.+..+..+....++.
T Consensus 100 --------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~ 150 (406)
T PRK15402 100 --------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD---------AIKITALMANVALLAP 150 (406)
T ss_pred --------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH---------HHHHHHHHHHHHHHHH
Confidence 34557788899999888877888899999998755 6677777777778899
Q ss_pred hhHHHhhhheecccCcchhhhhhhc
Q 041538 199 MVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 199 ~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
.++|.+.+++.++.+|++.|++.++
T Consensus 151 ~~g~~i~~~l~~~~~w~~~~~~~~~ 175 (406)
T PRK15402 151 LLGPLVGAALIHVLPWRGMFVLFAA 175 (406)
T ss_pred HHHHHHHHHHHHccCccHHHHHHHH
Confidence 9999999999888899999876543
No 41
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.59 E-value=2.4e-14 Score=127.30 Aligned_cols=141 Identities=16% Similarity=0.009 Sum_probs=112.0
Q ss_pred HHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 041538 48 NMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYT 127 (225)
Q Consensus 48 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 127 (225)
...+.+++++|+|+++.+++.+.+.+++.+++++.|+++||+ |||+++..+......+.. .....
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------- 76 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------- 76 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-------------
Confidence 333456779999999999999999999999999999999998 999876655444433322 11211
Q ss_pred cccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhh
Q 041538 128 LRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVY 207 (225)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~ 207 (225)
.+...+++.|++.|++.+.. .......+|.+|+++ |++..++.+.+..+|..+++.+.++
T Consensus 77 ----------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~---------r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 77 ----------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER---------RDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred ----------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14567999999999998864 455566689999744 8999999999999999999999999
Q ss_pred eecccCcchhhhhhhc
Q 041538 208 IQDNLGWKVGFGIPAA 223 (225)
Q Consensus 208 l~~~~g~~~~f~~~~~ 223 (225)
+.++.|||+.|.+.++
T Consensus 137 l~~~~gWr~~f~~~~~ 152 (368)
T TIGR00903 137 IYTAGGLQLLIIPIAA 152 (368)
T ss_pred HHHccchHHHHHHHHH
Confidence 9988999999977443
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.59 E-value=3e-14 Score=128.15 Aligned_cols=143 Identities=17% Similarity=0.156 Sum_probs=120.2
Q ss_pred HHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 041538 46 MPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACD 125 (225)
Q Consensus 46 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 125 (225)
.+.+|. +.+++|.+.++..+..+.+.++..+++++.|+++||+ ||||++..+.++..++.....++.
T Consensus 36 ~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~----------- 102 (413)
T PRK15403 36 QPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT----------- 102 (413)
T ss_pred ccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC-----------
Confidence 344443 5678999999999999999999999999999999998 999999999888888877666544
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhh
Q 041538 126 YTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFI 205 (225)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~ 205 (225)
+...++++++++|++.+...+.....+.|.+|+++ |++..+..+...+++..+||.++
T Consensus 103 -------------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 103 -------------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK---------GIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred -------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568889999999887666666778889888755 78888888889999999999999
Q ss_pred hheecccCcchhhhhhhc
Q 041538 206 VYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 206 ~~l~~~~g~~~~f~~~~~ 223 (225)
+++.++.||++.|++.++
T Consensus 161 ~~l~~~~gw~~~f~~~~~ 178 (413)
T PRK15403 161 AALMHFVHWKVLFAIIAV 178 (413)
T ss_pred HHHHHhcCHHHHHHHHHH
Confidence 999888899999986543
No 43
>PRK11043 putative transporter; Provisional
Probab=99.59 E-value=5.6e-14 Score=124.98 Aligned_cols=151 Identities=15% Similarity=0.123 Sum_probs=121.7
Q ss_pred HHHHHHhhHHHHHHH--HhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhh
Q 041538 38 ERMASTGFMPNMILY--LCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTI 115 (225)
Q Consensus 38 ~~~~~~~~~~~l~~y--l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~ 115 (225)
....+.....+.|.+ +++++|.++.+.++..+...+...+++++.|+++||+ ||||.+..+.++..++.....+..
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 333444444445544 6678999999999999999999999999999999998 999999998888877776666543
Q ss_pred cCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHh
Q 041538 116 FPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVS 195 (225)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ 195 (225)
+...+++.+.+.|++.+...+...+++.|.+|+++ +.+.++..+...+
T Consensus 93 -----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 140 (401)
T PRK11043 93 -----------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK---------ANRVFATIMPLVA 140 (401)
T ss_pred -----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH---------HHHHHHHHHHHHH
Confidence 34557778888888887777777888899998744 6677777777888
Q ss_pred hhhhhHHHhhhheecccCcchhhhhhh
Q 041538 196 ASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 196 ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
++..++|.+.+++.++.||++.|.+.+
T Consensus 141 ~~~~~g~~i~~~l~~~~g~~~~~~~~~ 167 (401)
T PRK11043 141 LSPALAPLLGAWLLNHFGWQAIFATLF 167 (401)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 999999999999999899999887654
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.59 E-value=5.7e-14 Score=128.66 Aligned_cols=164 Identities=10% Similarity=0.013 Sum_probs=120.3
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
+++.+.......+......+.+.+.+ +++++++|++..+.+++.+...++..++++++|+++||+ |||+++..+.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 44444444444455555555544443 466789999999999998888889999999999999998 9999999988888
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++.+++.+.. +...+++.+++.|++.+... .....++|.+|+++ |
T Consensus 112 ~~~~~~~~~~~------------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~---------r 157 (476)
T PLN00028 112 APAVFCMSLVS------------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI---------V 157 (476)
T ss_pred HHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh---------e
Confidence 77776666544 34456777888888877644 34567889999855 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhhee----c-----ccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQ----D-----NLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~----~-----~~g~~~~f~~~~~ 223 (225)
++..+..+...++|+.+++.+.+.+. + ..|||+.|++.++
T Consensus 158 g~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~ 206 (476)
T PLN00028 158 GTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGL 206 (476)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHH
Confidence 88888887777778777766665442 1 2589999987664
No 45
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.58 E-value=5.4e-14 Score=123.03 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH-HHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFG-CITCLLGMVLLW 111 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~-~~~~~i~~~~l~ 111 (225)
+..++...+.....+.+|.|+++++|.|+.+.+++.+...+...+.+++.|+++||+ ||||.+... .+...++..+..
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 356777777788889999999999999999999999999999999999999999998 999876654 444444545444
Q ss_pred HhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 041538 112 LTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYY 191 (225)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~ 191 (225)
++. +...+++.+.+.+.+.+...|...++..|..|+++| .+....+..+
T Consensus 83 ~~~------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~ 131 (375)
T TIGR00899 83 WNR------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGR-------EAVMFSSVMR 131 (375)
T ss_pred hcc------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcch-------hhHHHHHHHH
Confidence 433 344466666777666666777777788887765432 1333356677
Q ss_pred HHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 192 VSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 192 ~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
...++|..++|.+.+++.++.||++.|++.++
T Consensus 132 ~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 132 AQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred HHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 78899999999999999888899999987654
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.57 E-value=9e-14 Score=125.89 Aligned_cols=173 Identities=15% Similarity=0.109 Sum_probs=121.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhc--CCchhHHHHHH----HHHHHHHHHHHHHHHHHhHhhccchHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREY--NMKITEGTNVL----FFWSAASNFLPILGAFLADSYVGRYAMIGF 98 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~~~~~~~~~~----~~~~~~~~i~~~~~G~laDr~~Grr~~~~~ 98 (225)
+|.+....+..+++.+.........+.+..+++ +.++.+..... ....+...++.++.|+++||+ ||||++.+
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l~~ 99 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHHHH
Confidence 455555556667777766554445555666555 67766433211 233344567788899999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCcc
Q 041538 99 GCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSK 178 (225)
Q Consensus 99 ~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~ 178 (225)
+.+++.++..+..++++.+.. .......+++.|.++|++.|...+....++.|.+|+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~----- 158 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTI----------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK----- 158 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHH----------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC-----
Confidence 999999988888876521100 00012357788999999999999999999999999865
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHHhhhhee--------cccCcchhhhhhhc
Q 041538 179 SEGALKSYFSWYYVSVSASSMVAVTFIVYIQ--------DNLGWKVGFGIPAA 223 (225)
Q Consensus 179 ~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~--------~~~g~~~~f~~~~~ 223 (225)
|+...+..+.+..+|..+++.+..++. +++|||..|.+.++
T Consensus 159 ----rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~ 207 (438)
T PRK09952 159 ----KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIV 207 (438)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHH
Confidence 677777777788888888776666543 35799999987654
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=3.9e-14 Score=123.03 Aligned_cols=146 Identities=18% Similarity=0.167 Sum_probs=120.0
Q ss_pred HHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 041538 42 STGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARP 121 (225)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 121 (225)
.|.+ ..+.+++++++|+++.+.+++.+...+...+++++.|+++||+ ||||++..+.++..++...+.+..
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 4444 3445677889999999999999999999999999999999998 999999999998888887777655
Q ss_pred CccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhH
Q 041538 122 LACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVA 201 (225)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 201 (225)
+...+++.+.+.|++.+...+.....+.+.+|+ + |+...+......++|..++
T Consensus 90 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~g~~~~ 142 (377)
T TIGR00890 90 -----------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-K---------RGLASGIIIGGYGLGSFIL 142 (377)
T ss_pred -----------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-c---------cHHHHHHHHHhcchhHhHH
Confidence 455678888899999887777777778887763 3 7888888888889998877
Q ss_pred HHhhhheecccCcchhhhhhhc
Q 041538 202 VTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.+.+.+.+..||++.|.+.++
T Consensus 143 ~~~~~~~~~~~~~~~~f~~~~~ 164 (377)
T TIGR00890 143 SPLITSVINLEGVPAAFIYMGI 164 (377)
T ss_pred HHHHHHHHhcccHHHHHHHHHH
Confidence 7777777677799999886554
No 48
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.57 E-value=2.1e-14 Score=125.44 Aligned_cols=165 Identities=13% Similarity=0.015 Sum_probs=122.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
.++......++....++.+..++|.|+++++|.++.+.+.......+...++.++.|+++||+ |||+.+.....+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 355556667777777888889999999999999999999999999999999999999999998 9999877655544333
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSY 186 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~ 186 (225)
......... ...+...+.....+.+++.+...+...+++.|.+|+++ |+++
T Consensus 299 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~~~~ 349 (394)
T TIGR00883 299 AVPLLMALL--------------------DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV---------RYTG 349 (394)
T ss_pred HHHHHHHHh--------------------cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc---------eeeE
Confidence 221111110 01123445556667777777778889999999999866 5666
Q ss_pred HHHH-HHHHhhhhhhHHHhhhheecccC-cchhhhhh
Q 041538 187 FSWY-YVSVSASSMVAVTFIVYIQDNLG-WKVGFGIP 221 (225)
Q Consensus 187 ~~~~-~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~ 221 (225)
.+.. +....+|+.++|.+.+++.++.| |+..++..
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 6664 45567888899999999999888 77666544
No 49
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.57 E-value=4.9e-15 Score=134.99 Aligned_cols=144 Identities=13% Similarity=0.033 Sum_probs=117.6
Q ss_pred HHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 041538 50 ILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLR 129 (225)
Q Consensus 50 ~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 129 (225)
.+.+++++|++..+.+++.+.+...+.+++++.|+++||+ ||||++..+.++..++...+.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 116 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG-------------- 116 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--------------
Confidence 3457789999999999999999999999999999999998 9999998888777766666554320
Q ss_pred cccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 130 DSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
...++...+++.+.+.|++.+...+....+++|.+|+++ |+...+++....++|..+++.+..++.
T Consensus 117 -----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---------rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 117 -----SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK---------RGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred -----cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc---------eeeeEEeeecccchhhhHHHHHHHHHH
Confidence 012356778889999999999888999999999999966 788888888889999999998887765
Q ss_pred ccc---Ccchhhhhhh
Q 041538 210 DNL---GWKVGFGIPA 222 (225)
Q Consensus 210 ~~~---g~~~~f~~~~ 222 (225)
+.. +|+..|.+.+
T Consensus 183 ~~~~~~~~~~~f~~~g 198 (467)
T PRK09556 183 NYFFDGHVIGMFIFPS 198 (467)
T ss_pred HhhccCcchhHHHHHH
Confidence 543 5877776544
No 50
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.57 E-value=1.1e-13 Score=122.82 Aligned_cols=160 Identities=15% Similarity=0.086 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
+....+..+....+.......+|. +.+++|.++.+.++..+.+.....+++++.|+++||+ ||||.+..+.+...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHH
Confidence 334444555555555555555555 4567999999999999999999999999999999998 99999999988888877
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++.... +...+++.+.+.+++.+...+...+++.|.+|+++ |++..
T Consensus 83 ~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~---------r~~~~ 129 (392)
T PRK10473 83 LLCSLAE------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR---------RAKVL 129 (392)
T ss_pred HHHHHhC------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH---------HHHHH
Confidence 7666543 34557778889999988888888999999998855 89999
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+..+...+++..++|.+.+++.+..||++.|++.+
T Consensus 130 ~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 130 SLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 99999999999999999998888889998887654
No 51
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.56 E-value=1.3e-13 Score=125.68 Aligned_cols=165 Identities=11% Similarity=0.009 Sum_probs=120.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++....+++...++|.|+++++|+++.+++.......++..++.+++|+++||+ ||||.+........+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4566666677777777788889999999999999999999999989999999999999999998 999877665443333
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++.+.. ..+....++.+.+.|+..............|.+|++. |++
T Consensus 337 ~~~~~~~~~----------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~---------~g~ 385 (467)
T PRK09556 337 IFTLGVYQH----------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA---------IGV 385 (467)
T ss_pred HHHHHHHHh----------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh---------HHH
Confidence 322222211 1123334455555554433222233456679998855 899
Q ss_pred HHHHHHHHHhh-hhhhHHHhhhheec------------ccCcchhhhhhh
Q 041538 186 YFSWYYVSVSA-SSMVAVTFIVYIQD------------NLGWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~i-g~~~g~~l~~~l~~------------~~g~~~~f~~~~ 222 (225)
+.++.+...++ |+.++|.+.|++.| ..||+..|.+..
T Consensus 386 a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~ 435 (467)
T PRK09556 386 ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALD 435 (467)
T ss_pred HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHH
Confidence 99999998886 77999999999988 568999887654
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.56 E-value=1.1e-13 Score=126.12 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=113.5
Q ss_pred HHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccc
Q 041538 51 LYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRD 130 (225)
Q Consensus 51 ~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (225)
..+++++|.+.++.+++.+.+.....++.++.|+++||+ |||+.+..+.++..++.+++.+..
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345679999999999999999998999999999999998 999999999888888777766654
Q ss_pred ccccccchhHHHHHH-HHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 131 SCESATGSQLMLLYL-AFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
+...+++ .+++.|++.+...+....++.+.+| ++ |++..++.+...++|..++|.+.+++.
T Consensus 106 --------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~---------r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 106 --------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR---------RPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred --------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh---------HHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 2333443 4577788888765666778888885 33 899999999999999999999999998
Q ss_pred cccCcchhhhhhhc
Q 041538 210 DNLGWKVGFGIPAA 223 (225)
Q Consensus 210 ~~~g~~~~f~~~~~ 223 (225)
+.+||++.|.+.++
T Consensus 168 ~~~gwr~~f~~~~~ 181 (455)
T TIGR00892 168 ESFGWRGSFLILGG 181 (455)
T ss_pred HHhChHHHHHHHHH
Confidence 98999999987654
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=1.3e-13 Score=122.32 Aligned_cols=161 Identities=19% Similarity=0.113 Sum_probs=128.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHH-----HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEG-----TNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
......+..++....+....+.+|.|++ ++|.+..+. +.+.+...+...++.++.|+++||+ ||||.+..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 3445556677777777778888888886 578886653 6778888889999999999999998 99999999888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
...++..++.... +...+++.+++.+++.+ ..+.....+.|.+|+++
T Consensus 93 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~-------- 139 (408)
T PRK09874 93 GMGIVMVLMGLAQ------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK-------- 139 (408)
T ss_pred HHHHHHHHHHHHh------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh--------
Confidence 8777776665543 35567778888888755 45677788888888755
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|++..+..+...++|..++|.+.+.+.+..+|++.|++.++
T Consensus 140 -~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (408)
T PRK09874 140 -SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180 (408)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 78888898899999999999999999888899998876543
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.56 E-value=1.4e-13 Score=122.03 Aligned_cols=151 Identities=9% Similarity=0.004 Sum_probs=129.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++.......+.+.+|.|++ ++|.++.+.+++.+.+.++..+++++.|+++||+ ||||.+..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45677777888888888888888888887 6799999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.....+.. +...+++.+++.|++.+...+.....+.+..++++ |++
T Consensus 84 ~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~ 130 (381)
T PRK03633 84 GCAGLGLMV------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN---------RGR 130 (381)
T ss_pred HHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHH
Confidence 877666544 45668888999999998887777777778877644 889
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
..+.++...++|..+||.+.+.+.+.
T Consensus 131 ~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 131 LLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999988765
No 55
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.55 E-value=1.9e-13 Score=124.16 Aligned_cols=138 Identities=11% Similarity=0.030 Sum_probs=124.3
Q ss_pred hHHHHHHHHhHhcCCchhH-HHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 041538 45 FMPNMILYLCREYNMKITE-GTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLA 123 (225)
Q Consensus 45 ~~~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 123 (225)
..++..+|+.+++|+++.+ .+.+...+..++.+..+++|+++||+ |.||++.++.+..++...++.++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 3555667899999999999 99999999999999999999999998 999999999999999988888865
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHH
Q 041538 124 CDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVT 203 (225)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~ 203 (225)
+...+.+.+++.|++.|... +...++.+.+|+++ |++++++.+.+..+|.++++.
T Consensus 114 ---------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE---------R~ratsi~~sg~~vG~~Ia~~ 168 (511)
T TIGR00806 114 ---------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR---------YQRAAAYSRAAVLLGVFLSSV 168 (511)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH---------HHHHHHHHHHHHHHHHHHHHH
Confidence 46679999999999999988 89999999999855 899999999999999999999
Q ss_pred hhhheecccCcchhh
Q 041538 204 FIVYIQDNLGWKVGF 218 (225)
Q Consensus 204 l~~~l~~~~g~~~~f 218 (225)
++++ ...+||+.-+
T Consensus 169 L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 169 LGQL-LVTLGWISYS 182 (511)
T ss_pred HHHH-HHhcCchhHH
Confidence 9999 4567988654
No 56
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=9.8e-14 Score=127.33 Aligned_cols=164 Identities=10% Similarity=0.081 Sum_probs=116.9
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
+++.+.......++....+|++..++|.|+++.+|++..+.........++..++.++.|+++||+ |||+.+..+.+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444344444556678889999999999999999998888887888888889999999999998 9999888777654
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++...+..... ..+...+++++.+.+++.+...+....+..+.+|++. |
T Consensus 327 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~---------R 376 (490)
T PRK10642 327 FVLAIPAFILIN---------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI---------R 376 (490)
T ss_pred HHHHHHHHHHHh---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc---------c
Confidence 433332222110 1123445566666666655555667788889999866 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhh
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGF 218 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f 218 (225)
+++.+..+....+++.++|.+.+++.+..+ |+..+
T Consensus 377 g~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~ 412 (490)
T PRK10642 377 YSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPA 412 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHH
Confidence 888887655566777899999998877654 55444
No 57
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.55 E-value=4.5e-14 Score=128.15 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=113.9
Q ss_pred HHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 041538 48 NMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYT 127 (225)
Q Consensus 48 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 127 (225)
...++++++ |+++.+.+++.+...+...+++++.|+++||+ |||+++..+.++.+++.+.+.+...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------ 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------ 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc------------
Confidence 344567777 99999999999999999999999999999998 9999999998888888777766430
Q ss_pred cccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhh-hHHHhhh
Q 041538 128 LRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSM-VAVTFIV 206 (225)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-~g~~l~~ 206 (225)
...+...+++.+.+.+++.+...+.....+.|++|+++ |++..++++.+.++|+. .+|.+..
T Consensus 116 --------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~l~~~ 178 (452)
T PRK11273 116 --------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE---------RGGIVSVWNCAHNVGGGLPPLLFLL 178 (452)
T ss_pred --------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH---------HHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 11235567777888899888888877888899998855 89999999999998874 4555433
Q ss_pred heecccCcchhhhhhhc
Q 041538 207 YIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 207 ~l~~~~g~~~~f~~~~~ 223 (225)
.+....||++.|++.++
T Consensus 179 ~~~~~~gw~~~f~i~~~ 195 (452)
T PRK11273 179 GMAWFNDWHAALYMPAF 195 (452)
T ss_pred HHHHhccHHHHHHHHHH
Confidence 33334489999987543
No 58
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.55 E-value=2.1e-13 Score=120.06 Aligned_cols=157 Identities=12% Similarity=0.083 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHh
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLT 113 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~ 113 (225)
..............++|.|+++++|+++.+.+.+.....++..++.++.|+++||+ |||+.+..+.+...+....+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 324 (405)
T TIGR00891 246 LVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAI 324 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHh
Confidence 33334444556677889999999999999999999999999999999999999998 99999887766543322222211
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
. .+...+.+...+.++..+...+..+.++.|.+|+++ |++.++..+..
T Consensus 325 ~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~ 372 (405)
T TIGR00891 325 G-----------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ---------RAAGLGFTYQL 372 (405)
T ss_pred C-----------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch---------hHHHhhHHHHH
Confidence 1 122334444445555555556677888999998855 89999999999
Q ss_pred HhhhhhhHHHhhhheecccC-cchhhhhhhc
Q 041538 194 VSASSMVAVTFIVYIQDNLG-WKVGFGIPAA 223 (225)
Q Consensus 194 ~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~~ 223 (225)
.++|+.++|.+.|++.++.| |+..|....+
T Consensus 373 ~~~g~~~g~~~~g~l~~~~g~~~~~~~~~~~ 403 (405)
T TIGR00891 373 GNLGGALAPIIGALLAQRLDEYGTALASLSF 403 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHhhcc
Confidence 99999999999999999998 8888776544
No 59
>PRK03699 putative transporter; Provisional
Probab=99.55 E-value=2.9e-13 Score=120.56 Aligned_cols=162 Identities=12% Similarity=0.115 Sum_probs=120.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+.++...+..++....++++..++|.|+++++|+|+.+.+.+...+..+..++.++.|+++||+ ||||.+........+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3445455555566666778889999999999999999999999999999999999999999998 999988877665555
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
...++.... +.....+...+.|++.+...+...+...+..|.+ ++.
T Consensus 284 ~~~~~~~~~------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------~~~ 329 (394)
T PRK03699 284 LMYLFVNTD------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA----------SPK 329 (394)
T ss_pred HHHHHHHcC------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC----------CHH
Confidence 444433222 1223444455666666666676777777766642 234
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
..+..+...++|+.++|.+.|++.+..|++..|+..+
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhH
Confidence 4566777889999999999999999899998887554
No 60
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.55 E-value=1.1e-13 Score=123.40 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=123.9
Q ss_pred HHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcC
Q 041538 38 ERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFP 117 (225)
Q Consensus 38 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~ 117 (225)
.+..++...+.+| .+++++|+|.++.+++.+.+..+..+++++.|+++||+ ||||++..+.+++.++.....+++
T Consensus 21 ~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~--- 95 (393)
T PRK09705 21 MRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP--- 95 (393)
T ss_pred cchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc---
Confidence 3333455555555 46779999999999999999999999999999999998 999999999999999999888765
Q ss_pred CCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhh
Q 041538 118 HARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSAS 197 (225)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig 197 (225)
+...+++++++.|++.+...+..+.++.|.+| ++ |+...+.+..+.++|
T Consensus 96 ---------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~---------~~~~~g~~~~~~~~g 144 (393)
T PRK09705 96 ---------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR---------TPLVMGLWSAALMGG 144 (393)
T ss_pred ---------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc---------chhHHHHHHHHHHHH
Confidence 34457888999999999988888899999886 34 788888888888999
Q ss_pred hhhHHHhhhheeccc-Ccchhhhh
Q 041538 198 SMVAVTFIVYIQDNL-GWKVGFGI 220 (225)
Q Consensus 198 ~~~g~~l~~~l~~~~-g~~~~f~~ 220 (225)
..+++.+.+++.++. +|++.+..
T Consensus 145 ~~~g~~~~~~l~~~~~~w~~~~~~ 168 (393)
T PRK09705 145 GGLGAAITPWLVQHSETWYQTLAW 168 (393)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHH
Confidence 999999999888775 89887654
No 61
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=6.8e-14 Score=134.18 Aligned_cols=144 Identities=13% Similarity=0.041 Sum_probs=119.8
Q ss_pred hHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 041538 45 FMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLAC 124 (225)
Q Consensus 45 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 124 (225)
......+.+++++++++.+.+++.+...++..++.+++|+++||+ |||+.+.++.++..++.++..++.
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 344555677788999999999999999999999999999999998 999999999888888877777654
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 125 DYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
+...+++.+++.|++.++..+....+++|.+|++. |+...++......+|.++++.+
T Consensus 254 --------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~---------Rg~~~g~~~~~~~iG~ila~~l 310 (742)
T TIGR01299 254 --------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK---------RGEHLSWLCMFWMIGGIYAAAM 310 (742)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 35668889999999999999999999999999854 8998999888899999998887
Q ss_pred hhheecc-------------cCcchhhhhhh
Q 041538 205 IVYIQDN-------------LGWKVGFGIPA 222 (225)
Q Consensus 205 ~~~l~~~-------------~g~~~~f~~~~ 222 (225)
+.++..+ .+||+.|++.+
T Consensus 311 a~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 311 AWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHhccchhccccccccccHHHHHHHHH
Confidence 7655433 25777665543
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.54 E-value=2.3e-13 Score=121.58 Aligned_cols=163 Identities=12% Similarity=0.140 Sum_probs=128.0
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
-+|.+....+..+......+....++++++ +++|.++++.++..+.+.+...++.++.|+++||+ ||||++..+.++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~ 88 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLW 88 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHH
Confidence 346666677777777777777778888888 46899999999999999999999999999999998 9999999998888
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++..++.... . ...+...+++.+.+.|++.+...+.....+.+.+|+++ |
T Consensus 89 ~~~~~~~~~~~-~-------------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~---------~ 139 (402)
T TIGR00897 89 CVGHAAFIVFG-L-------------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN---------L 139 (402)
T ss_pred HHHHHHHHHHh-c-------------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH---------H
Confidence 77765443211 0 01134556777888888887766667777888888754 8
Q ss_pred HHHHHHHHHHHhhhh-hhHHHhhhheecccCcchh
Q 041538 184 KSYFSWYYVSVSASS-MVAVTFIVYIQDNLGWKVG 217 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~-~~g~~l~~~l~~~~g~~~~ 217 (225)
++..++++...++|. .++|.+.+++.+..||+..
T Consensus 140 g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~ 174 (402)
T TIGR00897 140 SSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNT 174 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHH
Confidence 999999999999986 5899999998888885433
No 63
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=3.1e-13 Score=118.25 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=115.4
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT 114 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~ 114 (225)
.+...........++|.|+++++|.++.+.+............+.+++|+++||+ ||||.+..+.+...+....+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444566788999999999999999888777777778889999999998 999988877665544443333322
Q ss_pred hcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHH
Q 041538 115 IFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSV 194 (225)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~ 194 (225)
+...++....+.+++.+...+....+..|..|+ + +++.++.++...
T Consensus 287 ------------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~ 332 (375)
T TIGR00899 287 ------------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R---------AGAATTLYTNTG 332 (375)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h---------hhHHHHHHHHHH
Confidence 233455556667777777677777788887764 2 458888999999
Q ss_pred hhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 195 SASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 195 ~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++|..++|.+.+++.+..||+..|.+.++
T Consensus 333 ~~g~~~g~~~~g~~~~~~g~~~~~~~~~~ 361 (375)
T TIGR00899 333 RVGWIIAGSVGGILAERWSYHAVYWFAIV 361 (375)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 99999999999999998899988876654
No 64
>PRK09952 shikimate transporter; Provisional
Probab=99.54 E-value=1.5e-13 Score=124.42 Aligned_cols=166 Identities=12% Similarity=0.042 Sum_probs=117.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+.........++....+|...++.|.|+++++|++..+...+.........++.++.|+++||+ ||||.+..+.++..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~ 328 (438)
T PRK09952 250 GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3333334456666777888899999999999999988766666666777788889999999998 999998877665554
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+..... .......+.....+.+++.+...+..+++.+|.+|++. |++
T Consensus 329 ~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~---------r~t 379 (438)
T PRK09952 329 SAFPFFMALE--------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY---------RYS 379 (438)
T ss_pred HHHHHHHHHH--------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch---------hHH
Confidence 4433332210 01122333444555567767667778899999999855 788
Q ss_pred HHHHHHH-HHhhhhhhHHHhhhheeccc--Ccchhhhhh
Q 041538 186 YFSWYYV-SVSASSMVAVTFIVYIQDNL--GWKVGFGIP 221 (225)
Q Consensus 186 ~~~~~~~-~~~ig~~~g~~l~~~l~~~~--g~~~~f~~~ 221 (225)
+.++.+. +..++++++|.+.+++.+.. +|...+...
T Consensus 380 g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~ 418 (438)
T PRK09952 380 GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYL 418 (438)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 8887554 45589999999999997744 366665543
No 65
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.54 E-value=1.3e-13 Score=125.15 Aligned_cols=143 Identities=10% Similarity=0.037 Sum_probs=113.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCcccccccccccccc
Q 041538 58 NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIF-PHARPLACDYTLRDSCESAT 136 (225)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 136 (225)
+.++.+.+++.+.+.++..+++++.|+++||+ ||||++..+.+++.++.....+.... ... ....
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~-------------~~~~ 116 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSI-------------GPDN 116 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccc-------------cccc
Confidence 88899999999999999999999999999998 99999999999888877766653200 000 0001
Q ss_pred chhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee-------
Q 041538 137 GSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ------- 209 (225)
Q Consensus 137 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~------- 209 (225)
......+++.+++.|++.|...+...++++|.+|+++ |+...+..+....+|..+++.+...+.
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~---------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 187 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI---------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW 187 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 1234567899999999999999999999999999855 788888888888999888877665432
Q ss_pred -cccCcchhhhhhhc
Q 041538 210 -DNLGWKVGFGIPAA 223 (225)
Q Consensus 210 -~~~g~~~~f~~~~~ 223 (225)
++.|||+.|++.++
T Consensus 188 ~~~~gWr~~f~~~~~ 202 (479)
T PRK10077 188 LNTDGWRYMFASEAI 202 (479)
T ss_pred cccCChHHHHHHHHH
Confidence 45699999986543
No 66
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.54 E-value=8.8e-14 Score=122.25 Aligned_cols=145 Identities=16% Similarity=0.167 Sum_probs=124.6
Q ss_pred HhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 041538 43 TGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPL 122 (225)
Q Consensus 43 ~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 122 (225)
....+.+|.+.+ ++|+++.+.+++.+...+...+++++.|+++||+ |||+.+..+.++..++..++.+..
T Consensus 8 ~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~-------- 77 (377)
T PRK11102 8 DMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ-------- 77 (377)
T ss_pred HHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc--------
Confidence 344566676665 6899999999999999999999999999999998 999999999988888887777654
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH
Q 041538 123 ACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV 202 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~ 202 (225)
+...+++.+.+.+++.+...+...+++.|.+|+++ |++..++.+...++|..++|
T Consensus 78 ----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~ 132 (377)
T PRK11102 78 ----------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE---------FSRMMSFVTLVMTIAPLLAP 132 (377)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHH
Confidence 34557778889999988888889999999998755 89999999999999999999
Q ss_pred HhhhheecccCcchhhhhhh
Q 041538 203 TFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 203 ~l~~~l~~~~g~~~~f~~~~ 222 (225)
.+.+++.++.+|++.|++.+
T Consensus 133 ~~~~~l~~~~~~~~~~~~~~ 152 (377)
T PRK11102 133 IIGGWLLVWFSWHAIFWVLA 152 (377)
T ss_pred HHHHHHHHHcChHHHHHHHH
Confidence 99999988889999987654
No 67
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.54 E-value=3.7e-14 Score=123.24 Aligned_cols=140 Identities=15% Similarity=0.184 Sum_probs=121.4
Q ss_pred HHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 041538 49 MILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTL 128 (225)
Q Consensus 49 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 128 (225)
..+++++++|+++++.+++.+...+...++.++.|+++||+ |||+.+..+.++..++.+++.+..
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------- 81 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST-------------- 81 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh--------------
Confidence 34578889999999999999999999999999999999998 999999999988888888777654
Q ss_pred ccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH-Hhhhh
Q 041538 129 RDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV-TFIVY 207 (225)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~-~l~~~ 207 (225)
+...+++.+.+.+++.+...+...+++.|.+|+++ |++..++.+...++|..++| .+.+.
T Consensus 82 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~ 142 (379)
T TIGR00881 82 ----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE---------RGTWVSFWNCSHNVGGGLLPPLVLFG 142 (379)
T ss_pred ----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh---------heeeEeehhccchhHHHHHHHHHHHH
Confidence 35568888999999999999999999999999855 78888888889999999999 56667
Q ss_pred eecccCcchhhhhhh
Q 041538 208 IQDNLGWKVGFGIPA 222 (225)
Q Consensus 208 l~~~~g~~~~f~~~~ 222 (225)
+.++.+|++.|.+.+
T Consensus 143 ~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 143 IAELYSWHWVFIVPG 157 (379)
T ss_pred HHhcCCchhHHHHHH
Confidence 777789999887655
No 68
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=7e-14 Score=124.20 Aligned_cols=168 Identities=16% Similarity=0.181 Sum_probs=132.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhc-cchHHHHHHH-H
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYV-GRYAMIGFGC-I 101 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~-Grr~~~~~~~-~ 101 (225)
..|.+|.+.+..++....-|++..|.|.|+.++.|+|..++.+..+.+..+...+++++||++||++ |||....+.+ +
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 3477888999999999999999999999999999999999999999999999999999999999998 7776544433 3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
...++.+.++.++ ..+..+..+.+..+|+..-+.+-.......|..|++.
T Consensus 330 ~i~~~~~~~w~~~----------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A-------- 379 (448)
T COG2271 330 LITASLVLYWLAP----------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA-------- 379 (448)
T ss_pred HHHHHHHHHHcCC----------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh--------
Confidence 4444444444433 2245666666677776655555566666778888744
Q ss_pred hHHHHHHHHHHHHhh-hhhhHHHhhhheecccCcchhhhhhh
Q 041538 182 ALKSYFSWYYVSVSA-SSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 182 ~r~~~~~~~~~~~~i-g~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
-+++.++..+...+ |...+....+++.|++||...|.+..
T Consensus 380 -aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~ 420 (448)
T COG2271 380 -AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLS 420 (448)
T ss_pred -ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHH
Confidence 68888888777777 88889999999999999999887543
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.53 E-value=4.8e-13 Score=121.43 Aligned_cols=153 Identities=13% Similarity=0.069 Sum_probs=116.9
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
....++...+..+...+.........|. +++++|.|+.+.++..+.+.++..+++++.|+++||+ ||||++..+.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 3344444455555556655544555554 5899999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
+++.+++.... ..++...+++++++.|+|.+...+..+.++.|..|+++ |
T Consensus 102 ~~~~~l~~~~~---------------------~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~---------~ 151 (438)
T PRK10133 102 ALGAALFWPAA---------------------EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS---------G 151 (438)
T ss_pred HHHHHHHHHHH---------------------hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh---------H
Confidence 98887653221 01246678899999999999999999999988644432 4
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
....+..+....+|..+||.+++.+
T Consensus 152 ~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 152 HFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777888888888876643
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.53 E-value=4.6e-13 Score=120.90 Aligned_cols=170 Identities=16% Similarity=0.120 Sum_probs=118.7
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHH-HHHH-----HHHHHHHHHHHHHHhHhhccchHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNV-LFFW-----SAASNFLPILGAFLADSYVGRYAMIGF 98 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~-~~~~-----~~~~~i~~~~~G~laDr~~Grr~~~~~ 98 (225)
++......+..+++.+....+. ...+.+.++++.++.+.+.. .+.. .+...+++++.|+++||+ ||||.+..
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 3444444556666666655444 44456777888877765433 2222 122246788999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCcc
Q 041538 99 GCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSK 178 (225)
Q Consensus 99 ~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~ 178 (225)
+.++..++..++.++.+.+.. .......+++.+++.|++.+...+....+++|.+|+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~----- 150 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATI----------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR----- 150 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHH----------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc-----
Confidence 999998888888876521100 00012246888999999999988888999999999866
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHHhhhhe--------ecccCcchhhhhh
Q 041538 179 SEGALKSYFSWYYVSVSASSMVAVTFIVYI--------QDNLGWKVGFGIP 221 (225)
Q Consensus 179 ~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l--------~~~~g~~~~f~~~ 221 (225)
|++..+++....++|..+++.+++.+ .+..|||+.|++.
T Consensus 151 ----rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~ 197 (434)
T PRK15075 151 ----KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIG 197 (434)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHH
Confidence 78888887777777777776666654 2467999999864
No 71
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.52 E-value=3.2e-13 Score=123.99 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=122.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHH-HH-----HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEG-TN-----VLFFWSAASNFLPILGAFLADSYVGRYAMIGFG 99 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~-~~-----~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (225)
+.++...+..+++.+.+.. ..+..+++.++++.+.++. .+ +.+...++..+++++.|+++||+ ||||++.++
T Consensus 16 ~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 93 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 4444555677777776554 5555567787876443221 11 23556677889999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.+++.++.++..++.+...+ ....+.++.+.++++|++.|+..+....+++|.+|+++
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~----------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------ 151 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATI----------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------ 151 (490)
T ss_pred HHHHHHHHHHHHhcccHHHH----------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------
Confidence 99999999888876521110 00012357889999999999999999999999999866
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhhee--------cccCcchhhhhhhc
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYIQ--------DNLGWKVGFGIPAA 223 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~--------~~~g~~~~f~~~~~ 223 (225)
|+...++...+..+|..+|+.+...+. +++|||+.|++.++
T Consensus 152 ---Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~ 200 (490)
T PRK10642 152 ---RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALP 200 (490)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHH
Confidence 677777777777777777765554332 25799999987553
No 72
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.51 E-value=1e-13 Score=125.24 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=116.1
Q ss_pred HHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 041538 49 MILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTL 128 (225)
Q Consensus 49 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 128 (225)
..+++++ .|+++++.++..+.+.+...+++++.|+++||+ |||+.+..+.++..++...+......
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 3456665 599999999999999999999999999999998 99999998888777776665543200
Q ss_pred ccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhh-
Q 041538 129 RDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVY- 207 (225)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~- 207 (225)
..+...+++.+.+.+++.+...+.....+.|.+|+++ |++.+++++...++|+.+++.+.+.
T Consensus 115 --------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~---------rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 115 --------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE---------RGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred --------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc---------chhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 1234556777888999988888888899999999866 8999999999999999999888775
Q ss_pred eecccCcchhhhhhhc
Q 041538 208 IQDNLGWKVGFGIPAA 223 (225)
Q Consensus 208 l~~~~g~~~~f~~~~~ 223 (225)
+.++.+|+..|++.++
T Consensus 178 ~~~~~~w~~~f~~~~~ 193 (438)
T TIGR00712 178 MAWFNDWHAALYFPAI 193 (438)
T ss_pred HHHhhhhHHHHHHHHH
Confidence 4445699999987543
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.51 E-value=5.5e-13 Score=120.06 Aligned_cols=149 Identities=12% Similarity=0.117 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
++......+...+.+ .+...+.+.+++++|+++.+.+++.+....+..++.++.|++.||+ ||||++..+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 333444444444444 4444444667889999999999999999999999999999999998 99999999999998888
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++.... ...+...+.+.+++.|+|.+...+..++++.+..|+++ |++..
T Consensus 83 ~l~~~~~---------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~---------~~~~~ 132 (410)
T TIGR00885 83 FLFWPAA---------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST---------ATRRL 132 (410)
T ss_pred HHHHHHH---------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH---------HHHHH
Confidence 7655432 11245668888999999999999999999999887755 67777
Q ss_pred HHHHHHHhhhhhhHHHhhhhe
Q 041538 188 SWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l 208 (225)
+..+...++|..++|.+.+.+
T Consensus 133 ~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 133 NLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 788888899999999888766
No 74
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.51 E-value=9.7e-13 Score=112.84 Aligned_cols=159 Identities=21% Similarity=0.248 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-HHHHHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYA-MIGFGCITCLLGMVL 109 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-~~~~~~~~~~i~~~~ 109 (225)
..+..+...........+.+.+.++.+|.++.+.+.......+...++.++.|+++||+ |||+ .+..+..+..++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHH
Confidence 33345555666677788888999888899999999999999999999999999999998 9999 888888888887776
Q ss_pred HHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHH
Q 041538 110 LWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSW 189 (225)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~ 189 (225)
+.... +....+....+.+++.+...+....+..|..|+++ |++.++.
T Consensus 259 ~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 305 (352)
T cd06174 259 LALAP------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA---------RGTASGL 305 (352)
T ss_pred HHHhc------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH---------HHHHHHH
Confidence 66543 24557778888999999999999999999999855 8999999
Q ss_pred HHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 190 YYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 190 ~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++...+++..++|.+.+++.+..+|+..|.+.++
T Consensus 306 ~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~ 339 (352)
T cd06174 306 FNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAA 339 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHH
Confidence 9999999999999999999988899988876654
No 75
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.50 E-value=4.5e-13 Score=119.68 Aligned_cols=155 Identities=17% Similarity=0.202 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+......++..++........+.. .+++|.++.+.+++.+.+.+...+..+++|+++||+ ||||++..+.++..++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 3444455666665444444444444 568899999999999999999999999999999998 99999999999888777
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
+.+.... + .++.+.++|++.+...|...+++.|.+|+++ |+++.
T Consensus 83 ~~~~~~~------------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~---------~~~a~ 126 (393)
T PRK11195 83 LLMLFGI------------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK---------LVKAN 126 (393)
T ss_pred HHHHHHH------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH---------HHHHH
Confidence 6655433 1 2567788999999999999999999999855 89999
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
++.+...+++..+||.++|++.+. .|+..+.+.
T Consensus 127 ~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~ 159 (393)
T PRK11195 127 GWMEGSTIAAILLGTVLGGALADP-HAEAALAVC 159 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 999999999999999999998775 366555543
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=1.3e-12 Score=116.46 Aligned_cols=162 Identities=14% Similarity=0.142 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHH-HHHHHHHHHHHHhHhhccchHHHH-HHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSA-ASNFLPILGAFLADSYVGRYAMIG-FGCITCLL 105 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~i 105 (225)
.+...+..++.......+.+.++.|+++++|.|+++.+...+.... ...+.++.+|+ +||+ ||||.++ .+.+...+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHH
Confidence 4555566888888888889999999999999999999998766544 55555666666 9998 9998754 44444445
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHH-HHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLA-FGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+..+..++. +...+++. +.+.+.+ +...+....+..|..++++| ..+
T Consensus 95 ~~~~~~~~~------------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~ 142 (393)
T PRK15011 95 ACTLFAWNR------------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTGR-------EAV 142 (393)
T ss_pred HHHHHHHhh------------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccc-------hHH
Confidence 555444433 23333333 3333333 34567777777776655332 123
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
...+..+...++|..+||.+++++.++.||+..|+..++
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 445677888999999999999999988999999987654
No 77
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=9e-13 Score=114.59 Aligned_cols=167 Identities=17% Similarity=0.059 Sum_probs=119.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHH-HHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAM-IGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-~~~~~~~~~ 104 (225)
|.++...+..++.....+....+.|.|+++++|.++.+.+.......+...++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4455566677777778888889999999999999999999999999999999999999999998 98862 111111111
Q ss_pred HHH---HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 105 LGM---VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 105 i~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
++. ....... . .............+...+.+ ..+....+..|.+|+++
T Consensus 294 ~~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------- 344 (399)
T TIGR00893 294 IAGLVLSLLMFAT--N------------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI-------- 344 (399)
T ss_pred HHHHHHHHHHHHh--c------------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH--------
Confidence 111 1111111 0 01122222222233333333 67888999999999865
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhhc
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPAA 223 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~~ 223 (225)
|++..++.+...++|..++|.+.+++.+..| |+..|.+.++
T Consensus 345 -~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~ 386 (399)
T TIGR00893 345 -AGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAA 386 (399)
T ss_pred -HHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHH
Confidence 8999999999999999999999999999888 8888876543
No 78
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.49 E-value=8.8e-13 Score=120.33 Aligned_cols=153 Identities=12% Similarity=-0.016 Sum_probs=114.7
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
+|.++...+..+.....-+.+.+..+...++++|+|++|.+++.++......+..++.|++.||+ |.||++.++.++..
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 36666655544444444444444344444558999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+....+.+.... ...+...+++.+.+.|++ +...++....++++||+++ |+
T Consensus 112 i~~~~~~~a~~~-------------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~---------rG 162 (462)
T PRK15034 112 IPCVWLGIAVQN-------------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK---------QG 162 (462)
T ss_pred HHHHHHHHHHcc-------------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH---------hH
Confidence 888777764200 012567788889999998 6678889999999999866 78
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVY 207 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~ 207 (225)
+..+++...+++|..+++.+.+.
T Consensus 163 ~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 163 SALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 88888876677777666665554
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.49 E-value=1.1e-12 Score=116.82 Aligned_cols=169 Identities=8% Similarity=-0.036 Sum_probs=121.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+|......++.......+.+++|.|+++++|+++.+.+++.....+...+++++.|+++||+ ||||.+..+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4466677778888888888899999999999999999999999999999999999999999998 999999877665554
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..........+.. ........++..++.+++.+...+....+..|.-++ ++.
T Consensus 81 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~ 133 (396)
T TIGR00882 81 LFAPFFIYVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN-----------SNF 133 (396)
T ss_pred HHHHHHHHHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh-----------ccc
Confidence 44332221100000 001123345556777777777777776666553221 223
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
.++..+...++|..+||.+++.+.+ .+|+..|++.++
T Consensus 134 ~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~ 170 (396)
T TIGR00882 134 EYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSG 170 (396)
T ss_pred ccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHH
Confidence 3455666789999999999998865 599999977654
No 80
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.48 E-value=9e-13 Score=114.53 Aligned_cols=162 Identities=14% Similarity=0.175 Sum_probs=113.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH--HH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI--TC 103 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~--~~ 103 (225)
|.++...+..++.....+.+..+.|.|+++++|+++.+.+.......+...++.++.|+++||..+||+....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 3445555566666666777888999999999999999999999999999999999999999986234443322211 11
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++...+.... ..+.....+...+.+.......+....+..|.+|++. |
T Consensus 296 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~ 344 (379)
T TIGR00881 296 IVSLLVYWLNP----------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA---------A 344 (379)
T ss_pred HHHHHHHhcCc----------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch---------h
Confidence 11111111100 1122334444445555444445556677889998855 8
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhh
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGF 218 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f 218 (225)
++..++++...++|+.++|.+.|++.++.||++.|
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999999998765
No 81
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.48 E-value=8.1e-13 Score=120.03 Aligned_cols=136 Identities=11% Similarity=0.129 Sum_probs=118.4
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccc
Q 041538 56 EYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESA 135 (225)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (225)
++++++.+.+.+.+.+.+...++++++|+++||+ |||+.+..+.++..++..+..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------- 127 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------- 127 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH---------------------
Confidence 6889999999999999999999999999999998 999999999888877776654432
Q ss_pred cchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheeccc-Cc
Q 041538 136 TGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNL-GW 214 (225)
Q Consensus 136 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~-g~ 214 (225)
..+...+++.+++.|++.+...+....++.|.+|+++ |++..++.+.+.++|..++|.+.+++.+.. ||
T Consensus 128 -~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw 197 (465)
T TIGR00894 128 -GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE---------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGW 197 (465)
T ss_pred -HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 1124558888999999999999999999999999855 899999999999999999999999998884 99
Q ss_pred chhhhhhhc
Q 041538 215 KVGFGIPAA 223 (225)
Q Consensus 215 ~~~f~~~~~ 223 (225)
++.|.+.++
T Consensus 198 ~~~f~i~~~ 206 (465)
T TIGR00894 198 PMIFYVFGI 206 (465)
T ss_pred CeehhhhhH
Confidence 999987654
No 82
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.47 E-value=1.5e-12 Score=119.74 Aligned_cols=157 Identities=12% Similarity=-0.018 Sum_probs=116.5
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCRE----YNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFG 99 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (225)
+++.+.++.+..+...+....+....+..-.+. .+.+..+.+++.....++..+++++.|+++||+ |||+.+..+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~ 92 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHH
Confidence 334444444455555555444443344322221 234556778899999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.++..++.++..++.+.. ...+...+++.+++.|++.|...+..+.+++|.+|+++
T Consensus 93 ~~~~~v~~~~~~~~~~~~------------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------ 148 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSS------------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------ 148 (502)
T ss_pred HHHHHHHHHHHHHccCcc------------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------
Confidence 988888887777643100 01135679999999999999999999999999999966
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
|++..++.+....+|..+++.+..++
T Consensus 149 ---Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 149 ---RGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998888887644
No 83
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.47 E-value=1.9e-13 Score=122.46 Aligned_cols=162 Identities=17% Similarity=0.113 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHH
Q 041538 32 IANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLW 111 (225)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~ 111 (225)
....++...........+|.+.+ +++.++.+.+++.+...+...+++++.|+++||+ ||||.+..+.++..++...+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHH
Confidence 33455555555555566666655 5677999999999999999999999999999998 999998888777766665544
Q ss_pred HhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 041538 112 LTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYY 191 (225)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~ 191 (225)
...... ..+...+++.+++.+++.+...+...+.+.|.+|+++ |++..++.+
T Consensus 101 ~~~~~~-------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 152 (417)
T PRK10489 101 LNAFLP-------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN---------LMQAGAITM 152 (417)
T ss_pred HHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH---------HHHHHHHHH
Confidence 321000 1234556777888888877777788888899988755 788888888
Q ss_pred HHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 192 VSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 192 ~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
...++|..+||.+++++.+..||++.|.+.++
T Consensus 153 ~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 153 LTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred HHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 89999999999999999888899988876543
No 84
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.47 E-value=2.7e-12 Score=114.58 Aligned_cols=162 Identities=12% Similarity=0.030 Sum_probs=121.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+..+...+..++....+++...++|.|+++ +|++..+++.......++..++.++.|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 334444445555667778889999999986 799999999999999999999999999999997 999998888777666
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+.... . +.... ...+.+++.+...+.......+.+++++ .+++
T Consensus 283 ~~~~~~~~~----------------------~-~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~--------~~g~ 329 (393)
T PRK09705 283 GFCGFIWLP----------------------L-QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA--------IAGK 329 (393)
T ss_pred HHHHHHHcc----------------------c-hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH--------HHHH
Confidence 655444322 0 11111 1234567777777766666777776432 2889
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~ 222 (225)
.++..+...++++.++|.+.|++.|+.| |...|.+.+
T Consensus 330 ~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~ 367 (393)
T PRK09705 330 LVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHA 367 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 9999999999999999999999999876 666666543
No 85
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.45 E-value=3.9e-12 Score=110.59 Aligned_cols=161 Identities=10% Similarity=0.056 Sum_probs=121.0
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCRE--YNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
+|.++...+..++....-.++..|.+.|+.+. +|+++.+++.....+.....++.++++++.||+ |+||.+.++.++
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34555555555554445567788999999854 799999999999999999999999999999998 999998888777
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
.+++..+..... ... ...+..+.+++.+..+|...+...+.+|++..
T Consensus 218 ~~~~~~l~~~~~-----------------------~~~--~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-------- 264 (310)
T TIGR01272 218 AVLLSIGAALTH-----------------------GYV--AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-------- 264 (310)
T ss_pred HHHHHHHHHHcC-----------------------CHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh--------
Confidence 766654443322 111 22355578888888999988888888886442
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+++ ++. ....+|+.+.|.+.|.+.|..|.+.+|++..
T Consensus 265 ~as--ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 265 QGS--GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hhH--HHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 333 333 5677999999999999999889888887544
No 86
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.44 E-value=1.7e-12 Score=118.38 Aligned_cols=144 Identities=17% Similarity=0.169 Sum_probs=108.7
Q ss_pred hhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 041538 44 GFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLA 123 (225)
Q Consensus 44 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 123 (225)
....++|.|+++++|+++.+.+.+.....++..++.+++|+++||+ |||+.+..+..+..++...+....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567899999989999999999999999999999999999999998 999988877655544443332211
Q ss_pred cccccccccccccchhHHHHHHHHHHH-HHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH
Q 041538 124 CDYTLRDSCESATGSQLMLLYLAFGLM-SLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV 202 (225)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~ 202 (225)
..+.........+. ..+.+ ..+..+.++.|.+|++. |++.+++++...++|+.+||
T Consensus 363 -------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~g~~lgp 419 (496)
T PRK03893 363 -------------GANVWVLGLLLFFQQMLGQG-ISGLLPKLIGGYFDTEQ---------RAAGLGFTYNVGALGGALAP 419 (496)
T ss_pred -------------ccHHHHHHHHHHHHHHHhcc-cchhhHHHHHhhCCHHH---------hhcccchhhhhhhHHHHHHH
Confidence 11222233333332 23333 34567778889998755 89999999999999999999
Q ss_pred HhhhheecccCcchhhhh
Q 041538 203 TFIVYIQDNLGWKVGFGI 220 (225)
Q Consensus 203 ~l~~~l~~~~g~~~~f~~ 220 (225)
.+.|++.+++||+..+..
T Consensus 420 ~l~g~l~~~~g~~~~~~~ 437 (496)
T PRK03893 420 ILGALIAQRLDLGTALAS 437 (496)
T ss_pred HHHHHHhccCChHHHHHH
Confidence 999999999998877644
No 87
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.44 E-value=2.7e-12 Score=114.73 Aligned_cols=166 Identities=13% Similarity=0.088 Sum_probs=118.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHH-HHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIG-FGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~ 104 (225)
|.++...+..++....+++..++.|.|++ ++|+++.+.+.+.....+...++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44555556667777788888999999986 5899999999988888999999999999999997 9988764 2333333
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+...... ..++....++...+.+++.+...+ ......|. ++++ |+
T Consensus 300 ~~~~~l~~~~~~-------------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~---------~g 349 (402)
T TIGR00897 300 IFTLALYYIPQH-------------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKH---------KG 349 (402)
T ss_pred HHHHHHHHHHHc-------------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-Ccch---------hH
Confidence 332222221100 011233445556666666665444 34555554 3333 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++.++++...+++..++|.+.+++.+.+||+..|++.++
T Consensus 350 ~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~ 388 (402)
T TIGR00897 350 AAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAA 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 999999999999999999999999999999988876653
No 88
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.44 E-value=2.1e-12 Score=114.46 Aligned_cols=155 Identities=13% Similarity=0.056 Sum_probs=114.4
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchh---HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHH
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKIT---EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLW 111 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~ 111 (225)
.+........+.++++.|.++..+.... ..+.+.....+...++.+..|+++||+ |||+.+..+.+...++.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 3344444455667788888875443222 234445556667778888999999998 999999888776666555444
Q ss_pred HhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 041538 112 LTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYY 191 (225)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~ 191 (225)
... +...+++...+.+++.+...+.....+.+..|++. |++.++.++
T Consensus 307 ~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~ 353 (408)
T PRK09874 307 FVQ------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI---------AGRIFSYNQ 353 (408)
T ss_pred Hhc------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc---------ceeeehHHH
Confidence 332 23446667778888888888888888888777654 788888888
Q ss_pred HHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 192 VSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 192 ~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
...++|..+||.+.|++.++.||+..|++.++
T Consensus 354 ~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~ 385 (408)
T PRK09874 354 SFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385 (408)
T ss_pred HHHHHHHHhhHHHHHHHHhhcchhHHHHHHHH
Confidence 89999999999999999999999999987654
No 89
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.43 E-value=3e-12 Score=113.85 Aligned_cols=152 Identities=11% Similarity=-0.098 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~ 112 (225)
...+......+....++|.|+++ .|+++.+.+.......++..++.++.|+++||+ |||+.+..+.+...++...+..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445566777888999875 699999999999999999999999999999998 9999888765555554443332
Q ss_pred hhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 041538 113 TTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV 192 (225)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~ 192 (225)
.. +...+.+...+.+++.+...+...++..|.+|+++ |++..++.+.
T Consensus 305 ~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~ 351 (406)
T PRK11551 305 AP------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV---------RGTGVGAAVA 351 (406)
T ss_pred cC------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh---------hhhhhhHHHH
Confidence 22 22334445556666666667788889999999866 8999999999
Q ss_pred HHhhhhhhHHHhhhheecccC-cchhhh
Q 041538 193 SVSASSMVAVTFIVYIQDNLG-WKVGFG 219 (225)
Q Consensus 193 ~~~ig~~~g~~l~~~l~~~~g-~~~~f~ 219 (225)
...+|..++|.+.|++.++.+ |...+.
T Consensus 352 ~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 379 (406)
T PRK11551 352 VGRLGSMAGPLLAGQLLALGRSTVGVIG 379 (406)
T ss_pred hhhHHHHHHhhhHhhhhccCCchHHHHH
Confidence 999999999999999988754 444443
No 90
>PRK15075 citrate-proton symporter; Provisional
Probab=99.43 E-value=1.7e-12 Score=117.21 Aligned_cols=153 Identities=10% Similarity=0.009 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHH-HH
Q 041538 32 IANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMV-LL 110 (225)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~-~l 110 (225)
....+.....++.+..+.|.|+++.+|++..+.++......+...++.+++|+++||+ ||||.+..+.....+... .+
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3344445666778889999999999999999999888888888999999999999998 999987776544332221 11
Q ss_pred HHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHH
Q 041538 111 WLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWY 190 (225)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~ 190 (225)
.... . ............+.+++.+...+....+..|.+|++. |+++.++.
T Consensus 323 ~~~~--~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~---------rg~~~g~~ 372 (434)
T PRK15075 323 SWLV--A-------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV---------RTAGFSLA 372 (434)
T ss_pred HHHH--c-------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc---------cchheeHH
Confidence 1111 0 0111222233334445555555666678899999866 77888876
Q ss_pred HHHHh-hhhhhHHHhhhheecccCcc
Q 041538 191 YVSVS-ASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 191 ~~~~~-ig~~~g~~l~~~l~~~~g~~ 215 (225)
+...+ +++.++|.+.+++.++.|+.
T Consensus 373 ~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 373 YSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 55444 45778999999999988853
No 91
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.43 E-value=2.2e-12 Score=116.30 Aligned_cols=163 Identities=9% Similarity=0.018 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhHhcCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 30 FIIANEAFERMASTGFMPNMILYLCREYNMK--------ITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
...+..++..........+.+.|+++ .+.+ .++.+...++..+...++.++.|+++||+ |||+++..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 33344444444444455777888875 3443 35668888888888899999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..++..++..... .......+++...+.+++.+...+....++.|.+|+++
T Consensus 290 ~~~v~~~l~~~~~~--------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~-------- 341 (418)
T TIGR00889 290 AWALRFGFFAYGDP--------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI-------- 341 (418)
T ss_pred HHHHHHHHHHHcCc--------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--------
Confidence 88777665554220 01123456667788888888777888889999999855
Q ss_pred hHHHHHHHHH-HHHhhhhhhHHHhhhheecc------cCcchhhhhhhc
Q 041538 182 ALKSYFSWYY-VSVSASSMVAVTFIVYIQDN------LGWKVGFGIPAA 223 (225)
Q Consensus 182 ~r~~~~~~~~-~~~~ig~~~g~~l~~~l~~~------~g~~~~f~~~~~ 223 (225)
|++.+++.+ ...++|..+||.+.|++.++ +||+..|.+.++
T Consensus 342 -~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~ 389 (418)
T TIGR00889 342 -RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAG 389 (418)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 899999997 56789999999999999887 458888775543
No 92
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.42 E-value=3.3e-12 Score=115.28 Aligned_cols=154 Identities=14% Similarity=-0.051 Sum_probs=100.4
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH-h
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL-T 113 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~-~ 113 (225)
.+.....+|++.+|+|.|+++++|++..+.+....+......++.++.|+++||+ ||||.+....++..+....+.. .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344667888999999999999999999998888887888888889999999997 9999887765544333322221 1
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
.. ..+.........+.....+...+..+.+..|.+|++. |+++.++.|..
T Consensus 331 ~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~---------r~t~~g~~~~~ 380 (432)
T PRK10406 331 QN---------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV---------RALGVGLSYAV 380 (432)
T ss_pred Hc---------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc---------cchhhhHHHHH
Confidence 10 0111111111121222222233456678899999966 79999988766
Q ss_pred Hh-hhhhhHHHhhhheecccC-cchhhhh
Q 041538 194 VS-ASSMVAVTFIVYIQDNLG-WKVGFGI 220 (225)
Q Consensus 194 ~~-ig~~~g~~l~~~l~~~~g-~~~~f~~ 220 (225)
.+ +++...|.+.+++. ..| |...+..
T Consensus 381 g~~~~g~~~p~~~~~l~-~~g~~~~~~~~ 408 (432)
T PRK10406 381 ANALFGGSAEYVALSLK-SIGMETAFFWY 408 (432)
T ss_pred HHHHHHhHHHHHHHHHH-HhCCCcHHHHH
Confidence 55 44556888888664 445 5444443
No 93
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=5.5e-12 Score=114.51 Aligned_cols=166 Identities=14% Similarity=0.135 Sum_probs=112.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccc--hHHH-HHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGR--YAMI-GFGCIT 102 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr--r~~~-~~~~~~ 102 (225)
+.++...+..++.....++...++|.|++++.|++..+++.+.....+...++.+++|+++||+ ++ |+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4455555666666677788889999999999999999999888888888999999999999997 53 3322 222222
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++...+.+.. ..+....++...+.+............+..|.+|++.
T Consensus 332 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--------- 380 (452)
T PRK11273 332 VTIATIVYWLNP----------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA--------- 380 (452)
T ss_pred HHHHHHHHHHhc----------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh---------
Confidence 333333222211 0112223333334443322222233456678888855
Q ss_pred HHHHHHHHHHHHhhhhhh-HHHhhhheecccCcchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMV-AVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~-g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|++++++.+...++|+.+ +|.+.|++.|+.||+..|.+.++
T Consensus 381 ~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~ 422 (452)
T PRK11273 381 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 422 (452)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHH
Confidence 899999998888888654 79999999999999999875543
No 94
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.42 E-value=5.1e-12 Score=112.20 Aligned_cols=160 Identities=12% Similarity=0.067 Sum_probs=130.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++....+....++.|.|+++ .|.++.+.+.+.....+...+..++.+++.||+ |+|+.+.++.+.+.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 555666666677777777888899999975 899999999999999999999999999999998 999999999998888
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
....+...+ +...++....+.++..+...+....++.+. |+++ |++
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~---------~~~ 328 (382)
T TIGR00902 283 RWAIIGAIE------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE---------IAK 328 (382)
T ss_pred HHHHHHhHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh---------HHH
Confidence 887776544 455677788999999999888888888887 7644 677
Q ss_pred HHHHHH-HHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 186 YFSWYY-VSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~-~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
..+.++ ....+|..++|.++|++.|+.|+ ..|...+
T Consensus 329 ~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~ 365 (382)
T TIGR00902 329 LQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMA 365 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHH
Confidence 788775 46789999999999999999886 4454433
No 95
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.42 E-value=2.8e-12 Score=115.02 Aligned_cols=169 Identities=8% Similarity=-0.071 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|..+...+..++...+++...++++.|+++++|+++.+.+.+.+...+...+++++.|+++||+ ||||++..+.....+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 5566666777777787778899999999999999999999999999999999999999999998 999998876655544
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+......+ ....-......+.++..+...........+..++.. +.++.
T Consensus 89 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~ 141 (420)
T PRK09528 89 LFGPFFIYVFAP--------------------LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS-------RRSGF 141 (420)
T ss_pred HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH-------hhccc
Confidence 433222111000 000001111222222222222222222223222111 11455
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
.++..+...++|..++|.+++++.+ .+|++.|++.++
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~ 178 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSG 178 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHH
Confidence 5666777789999999999998876 488888876553
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.42 E-value=6.4e-13 Score=125.93 Aligned_cols=177 Identities=14% Similarity=0.240 Sum_probs=131.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
+|.+........+....+.+......+-++++++++.++.+++.+.+.++..++.++.|+++||+ ||||.+.++.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 34443444434444445555666666778899999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHHhhhcCCC----------------CCCccccc----cc-c----cccccc--chhHHHHHHHHHHHHHhCccc
Q 041538 105 LGMVLLWLTTIFPHA----------------RPLACDYT----LR-D----SCESAT--GSQLMLLYLAFGLMSLGGGGI 157 (225)
Q Consensus 105 i~~~~l~~~~~~~~~----------------~~~~~~~~----~~-~----~~~~~~--~~~~~~~~~~~~l~g~g~g~~ 157 (225)
++.+++++...+..- ..+.|..+ .+ + .|.... .....++++++++.|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 999888765311100 01122100 00 0 111111 113456888999999999999
Q ss_pred chhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 158 RSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 158 ~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
.+...+++.|.+|+++ |+...++++....+|..+|+.+++++.+.
T Consensus 190 ~~~~~~~i~d~~~~~~---------~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN---------SPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhcCchhhhccCCccc---------cHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 9999999999999866 79999999999999999999999987653
No 97
>PRK03545 putative arabinose transporter; Provisional
Probab=99.41 E-value=1.7e-11 Score=108.84 Aligned_cols=161 Identities=10% Similarity=-0.060 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
++......++.....+...++++.|++++.|++..+.+.......+...++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344444455555566677888999988999999999999999999999999999999997 987654 3333333333
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..+.... .+...+++..++.|++.+...+.....+.+..|+ + |+++.
T Consensus 285 ~~l~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~---------~~~~~ 331 (390)
T PRK03545 285 LLLLPAA-----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A---------TDVAM 331 (390)
T ss_pred HHHHHHh-----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c---------HHHHH
Confidence 2222111 1334556667777777766666667777776553 3 78888
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.++...++|..+||.+.|++.++.|++..|...++
T Consensus 332 g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~ 367 (390)
T PRK03545 332 ALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAA 367 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHH
Confidence 888888999999999999999999999988876654
No 98
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.40 E-value=8.1e-12 Score=110.66 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=110.4
Q ss_pred HHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 041538 40 MASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHA 119 (225)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~ 119 (225)
..+.....++|.|+++ .|.++++.+.......+...+++++.|+++||+ |||+.+..+.....++...+. ..
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~----- 285 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ----- 285 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh-----
Confidence 3444456678888875 699999999989999999999999999999998 999998887776666554332 11
Q ss_pred CCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhh
Q 041538 120 RPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSM 199 (225)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 199 (225)
........+.+++.....|...+...|..|+++ ++...+.++...++|..
T Consensus 286 ---------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 286 ---------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE---------LVAMNQALLLSYTVGSL 335 (381)
T ss_pred ---------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH---------HHHHHHHHHHHHHHHHH
Confidence 112234455555555567888888888887744 56666777788899999
Q ss_pred hHHHhhhheecccCcchhhhhhhc
Q 041538 200 VAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 200 ~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+||.+.|++.|+.||++.|.+.+.
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~ 359 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIAS 359 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHH
Confidence 999999999999999988876543
No 99
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=4.9e-12 Score=121.48 Aligned_cols=120 Identities=12% Similarity=0.047 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHH
Q 041538 67 VLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLA 146 (225)
Q Consensus 67 ~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (225)
...+..++..++.+++|+++||+ |||+++.++.++..++.+++.+.. +...+++.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~------------------------s~~~ll~~ 654 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN------------------------SESAMIAL 654 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc------------------------cHHHHHHH
Confidence 34566678888999999999998 999999998888888777666543 12234444
Q ss_pred HHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 147 FGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 147 ~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
+.+.+++.++..+...++++|++|++. |++++++.+...++|+++||.+.+.+.+. +....|.+.
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~---------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~ 719 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDK---------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFA 719 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHH
Confidence 556666666677888999999999954 99999999999999999999999977654 344455443
No 100
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=1.4e-11 Score=106.72 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=123.2
Q ss_pred chHHHHHHHHHHHHHHHHhhH-HHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFM-PNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
|.++......+.....+.... .+.|.|.++.+|.++.+.+.+.....++..++.++.+++.||+ |||+.+..+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 444555555555555555555 7778888888999999999999999999999999999999998 99998888766666
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+.+.. + +...+++...+.+++.+...+....++.|..|+++ |+
T Consensus 289 ~~~~~~~~~~----------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g 336 (365)
T TIGR00900 289 LAILVVGLTP----------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL---------LG 336 (365)
T ss_pred HHHHHHHhhc----------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HH
Confidence 6655554432 1 24556677788888888888888999999999855 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
+..+.++...+++..++|.+.|++.|+.|
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 337 RVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999988654
No 101
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.40 E-value=1.5e-12 Score=116.72 Aligned_cols=150 Identities=7% Similarity=0.010 Sum_probs=113.0
Q ss_pred HHHHhhHHHHHHHHhHhc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhc
Q 041538 40 MASTGFMPNMILYLCREY---NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIF 116 (225)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~ 116 (225)
..+.....+.|.|+.+.+ +.+..+.+.+.++..+...++.+++|+++||+ ||||.+..+.++..++..++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~-- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT-- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc--
Confidence 333344455777776543 56667778888888888889999999999998 999999888887777776666543
Q ss_pred CCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHH-HHHHHh
Q 041538 117 PHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSW-YYVSVS 195 (225)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~-~~~~~~ 195 (225)
++..++....+.+++.+...+....++.|.+|++. +++..+. ++....
T Consensus 314 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~a~~~~~~~~~~~~ 362 (420)
T PRK09528 314 ----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL---------SATIYLVGFQFAKQ 362 (420)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc---------eeeeeeehHHHHHH
Confidence 33445666777777776666667788888888755 5555544 567788
Q ss_pred hhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 196 ASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 196 ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+|..++|.+.|++.|..||+..|...++
T Consensus 363 lg~~ig~~~~G~l~~~~G~~~~f~~~~~ 390 (420)
T PRK09528 363 LGAVFLSTLAGNLYDSIGFQGTYLILGG 390 (420)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHH
Confidence 9999999999999999999988886543
No 102
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=5.8e-12 Score=111.72 Aligned_cols=149 Identities=13% Similarity=0.123 Sum_probs=115.0
Q ss_pred HHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcC
Q 041538 38 ERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFP 117 (225)
Q Consensus 38 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~ 117 (225)
....+..+..+.+.|+++ .|++. .+.......+...+++++.|++.||+ ||||.+..+..+..++..++....
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~--- 300 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP--- 300 (392)
T ss_pred HHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc---
Confidence 344555666777888875 46553 44555667777788999999999997 999999888877777766554432
Q ss_pred CCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhh
Q 041538 118 HARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSAS 197 (225)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig 197 (225)
+.........+.+++.+...+.......|.+|+++ |++.++.++...++|
T Consensus 301 ---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g 350 (392)
T PRK12382 301 ---------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV---------RGTALGGYAAFQDIA 350 (392)
T ss_pred ---------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHH
Confidence 23345566777788888777778888888888744 899999999999999
Q ss_pred hhhHHHhhhheecccCcchhhhhhhc
Q 041538 198 SMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 198 ~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
..++|.+.+++.++.||+..|.+.++
T Consensus 351 ~~ig~~~~g~l~~~~g~~~~~~~~~~ 376 (392)
T PRK12382 351 YGVSGPLAGMLATSFGYPSVFLAGAI 376 (392)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 99999999999999999999887654
No 103
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.39 E-value=2.4e-11 Score=106.37 Aligned_cols=153 Identities=12% Similarity=0.023 Sum_probs=113.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhcc-chHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVG-RYAMIGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-rr~~~~~~~~~~~ 104 (225)
|..+...+...+....++....++|.|+++ .|+|..+.+.......+...++.++.|+++||+ + ||+.+..+.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV-KDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-ccchHHHHHHHHHHH
Confidence 444444445555666777888899999985 699999999999999999999999999999997 5 4556666666676
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++.+.+.+.. .... . ....+.+++.+...+...+...+..+++++ ++
T Consensus 275 ~~~~~~~~~~----------------------~~~~--~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~--------~g 321 (355)
T TIGR00896 275 VGLCGLLFAP----------------------MHGL--W-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ--------AA 321 (355)
T ss_pred HHHHHHHHhh----------------------hhHH--H-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH--------HH
Confidence 6666555433 0111 1 134567888888877777776665554332 67
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
..++..+...+++..++|.+.|++.|+.|
T Consensus 322 ~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 322 ALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77888888888999999999999998876
No 104
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.39 E-value=1.6e-12 Score=113.84 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=112.6
Q ss_pred HHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 041538 46 MPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACD 125 (225)
Q Consensus 46 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 125 (225)
.+.+ +.+++++|+|+++.+++.+...+...++.++.|+++||+ ||||++..+.+...++.... ...
T Consensus 20 ~~~l-p~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~----------- 85 (355)
T TIGR00896 20 GPLL-PQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP----------- 85 (355)
T ss_pred cccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc-----------
Confidence 3444 456779999999999999999999999999999999998 99999999887777666544 222
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhh
Q 041538 126 YTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFI 205 (225)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~ 205 (225)
+...+++.+.+.+++.+...+..+..+.|.+|+ + |++..+.++...++|..+++.+.
T Consensus 86 -------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 86 -------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R---------VGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h---------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888889988887777777888887753 3 78889999999999999999999
Q ss_pred hheeccc--Ccchhhhhhh
Q 041538 206 VYIQDNL--GWKVGFGIPA 222 (225)
Q Consensus 206 ~~l~~~~--g~~~~f~~~~ 222 (225)
+.+.++. +|+..|...+
T Consensus 143 ~~l~~~~~~~w~~~f~~~~ 161 (355)
T TIGR00896 143 VPLAQHSGGHWQQALAWWA 161 (355)
T ss_pred HHHHHhhhhhHHHHHHHHH
Confidence 9887665 3888776543
No 105
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.39 E-value=7.4e-12 Score=113.13 Aligned_cols=166 Identities=8% Similarity=0.025 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccc-hHHH-HHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGR-YAMI-GFGCITCL 104 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~~-~~~~~~~~ 104 (225)
.++...+..+.....++++.+++|.|+++++|++..+++.......++..++.+++|+++||+.+| |+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 344444455555666677888999999888999999999999999999999999999999997222 2222 22222222
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+..+.+.... . . +...........+++.............|.+|+++ |+
T Consensus 324 ~~~~~~~~~~---~------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g 372 (434)
T PRK11663 324 LSVGSLWLMP---F------------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA---------AG 372 (434)
T ss_pred HHHHHHHHcc---c------------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh---------HH
Confidence 2222222111 0 0 11122222233333222222233445678777644 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+..++.+...++|..++|.+.+++.|+.||+..|...++
T Consensus 373 ~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~ 411 (434)
T PRK11663 373 AATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISI 411 (434)
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHH
Confidence 999999999999999999999999999999998876654
No 106
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.39 E-value=7.6e-12 Score=111.10 Aligned_cols=150 Identities=14% Similarity=0.133 Sum_probs=114.9
Q ss_pred HHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhc
Q 041538 37 FERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIF 116 (225)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~ 116 (225)
+....+.....+++.|+++ .|++ +.+.......++..++.++.|++.||+ ||||.+..+..+..++...+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP-- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3344556667788888764 4653 345556677778888999999999997 999998888777777766555432
Q ss_pred CCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhh
Q 041538 117 PHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSA 196 (225)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~i 196 (225)
+....++..++.+++.+...+.......|.+|+++ |++..+.++...++
T Consensus 301 ----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~ 349 (399)
T PRK05122 301 ----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN---------RGAALGAYSVFLDL 349 (399)
T ss_pred ----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHH
Confidence 23445666778888888777777777788887744 89999999999999
Q ss_pred hhhhHHHhhhheecccCcchhhhhhhc
Q 041538 197 SSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 197 g~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|..+++.+.|++.++.||+..|.+.++
T Consensus 350 g~~~~~~~~g~l~~~~g~~~~~~~~~~ 376 (399)
T PRK05122 350 SLGITGPLAGLVASWFGYPSIFLAAAL 376 (399)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 999999999999998899988876543
No 107
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.38 E-value=1.3e-11 Score=110.98 Aligned_cols=163 Identities=10% Similarity=-0.043 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHH-HHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCR-EYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMI-GFGCITCL 104 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~-~~~~~~~~ 104 (225)
.++...+..++....++++.+++|.|+++ +.++++.+++.......+...++.+++|+++||+ +||+.. ....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 44555566677777888899999999987 3578888899999999999999999999999997 877753 33333333
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++..+ .... . +......+..+.+++.....+.......|.+|++. |+
T Consensus 322 ~~~~~-~~~~----------------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~ 368 (412)
T TIGR02332 322 AGWLL-ASAT----------------------D-HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA---------RA 368 (412)
T ss_pred HHHHH-HHhc----------------------C-CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH---------HH
Confidence 33211 1111 0 11112222223333332222333334455666644 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~~ 223 (225)
.++++.+...++|+.++|.+.+.+.+..| |+.+|++.++
T Consensus 369 ~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 369 IAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 99999999999999999999999998875 9988876543
No 108
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.37 E-value=1.5e-11 Score=112.09 Aligned_cols=164 Identities=11% Similarity=0.039 Sum_probs=124.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh-ccchHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY-VGRYAMIGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~-~Grr~~~~~~~~~~~ 104 (225)
|.++......++....++....+++.|+++ +|+++.+++.+.+...++..++++++|+++||. .++|+...+......
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 445555556666677777788899999875 799999999999999999999999999999984 244444433332222
Q ss_pred --HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 105 --LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 105 --i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
++..++.... +...+++...+.|++.+...+...+++.|.+|+++
T Consensus 320 ~~l~~ll~~~~~------------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~--------- 366 (455)
T TIGR00892 320 NGLTHLLCALAG------------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR--------- 366 (455)
T ss_pred HHHHHHHHHHhc------------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH---------
Confidence 2222222211 34456677888889998888888999999998855
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheeccc-Ccchhhhhhhc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDNL-GWKVGFGIPAA 223 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~-g~~~~f~~~~~ 223 (225)
+++..++++...++|..+||.++|++.+.. +|+..|++.++
T Consensus 367 ~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~ 408 (455)
T TIGR00892 367 FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGS 408 (455)
T ss_pred HhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhH
Confidence 789999999999999999999999999887 59888887654
No 109
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=6.3e-12 Score=112.57 Aligned_cols=147 Identities=8% Similarity=-0.016 Sum_probs=117.0
Q ss_pred HHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 041538 42 STGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARP 121 (225)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 121 (225)
.++...++|.|+++.+|+++.+.+++.....++..++.++.+++.||. ++++.+..+.+...++.+++.+..
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345677889999988999999999999999999999999999999996 888888777766666655444322
Q ss_pred CccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhH
Q 041538 122 LACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVA 201 (225)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 201 (225)
+.....+...+.+++.+...+...+++.|..|++. |++.+++++...++|..+|
T Consensus 311 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 311 -----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM---------LGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH---------HHHHHHHHHHHHhhhHhHH
Confidence 23345556666777776666667788888888744 8999999999999999999
Q ss_pred HHhhhheecccCcchhhhhhh
Q 041538 202 VTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~~f~~~~ 222 (225)
|.+.|++.+..|++..+...+
T Consensus 365 ~~l~G~l~~~~g~~~~~~~~~ 385 (417)
T PRK10489 365 AALLGGLGAMMTPVASASASG 385 (417)
T ss_pred HHHHHHHHHHhchhhHHHHHH
Confidence 999999999888877776544
No 110
>TIGR00898 2A0119 cation transport protein.
Probab=99.36 E-value=4.4e-12 Score=116.16 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=115.7
Q ss_pred HHhHhcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 041538 52 YLCREYNMK---ITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTL 128 (225)
Q Consensus 52 yl~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 128 (225)
-+.+++|++ +.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++..++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 366789998 88999999999999999999999999997 999999999888888877776654
Q ss_pred ccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 129 RDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
+...+++.+.+.|++.+...+....++.|.+|+++ |+...++......+|..++|.++.++
T Consensus 179 ----------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 179 ----------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ---------RAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred ----------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh---------hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45668889999999999999999999999999866 78888888888899999999887776
Q ss_pred ecccCcchhhhhhhc
Q 041538 209 QDNLGWKVGFGIPAA 223 (225)
Q Consensus 209 ~~~~g~~~~f~~~~~ 223 (225)
.+ |++.|.+.++
T Consensus 240 ~~---wr~~~~~~~i 251 (505)
T TIGR00898 240 PD---WRWLQLAVSL 251 (505)
T ss_pred hH---HHHHHHHHHH
Confidence 53 8888876543
No 111
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.35 E-value=2.2e-11 Score=110.50 Aligned_cols=156 Identities=13% Similarity=0.097 Sum_probs=123.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|..+...+..++....+++...++|.|+++.+|+++.+++.......+...++.++.|++.||+ |||+.+.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4445555666677777788888999999999999999999999999999999999999999997 999998888877777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++.+... + ..+.........+.+++.+...+.......+..|+++ |++
T Consensus 334 ~~~~~~~~~~-~-------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~---------~g~ 384 (485)
T TIGR00711 334 GFYWRAFTFT-P-------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK---------IAR 384 (485)
T ss_pred HHHHHhccCC-C-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HhH
Confidence 7766553210 0 1123345555777888888777667777777788755 899
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
+.+.++...++|+.+|+.+.+.+.++
T Consensus 385 ~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 385 GSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987664
No 112
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=2.5e-11 Score=106.25 Aligned_cols=145 Identities=13% Similarity=0.011 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMV 108 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~ 108 (225)
+...+..++....++....++| ++.+++|+++.+.+.......+...++.++.|+++||+ |||+.+.......... .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~-~ 329 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA-V 329 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH-H
Confidence 3334445556666677777777 66678899999999999999999999999999999998 9885544443333332 2
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
++.... .+....+....+.+++.+...+...+++.|.+|++. |++..+
T Consensus 330 ~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g 377 (398)
T TIGR00895 330 LVGSTL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI---------RATGVG 377 (398)
T ss_pred HHHHHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH---------HHHHHH
Confidence 222211 123345666677888888888889999999999855 899999
Q ss_pred HHHHHHhhhhhhHHHhhhhe
Q 041538 189 WYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l 208 (225)
+.+....+|..+||.+.|++
T Consensus 378 ~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 378 WAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999876
No 113
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=3.1e-11 Score=107.15 Aligned_cols=168 Identities=14% Similarity=0.037 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHH-HHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSA-ASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
++......++.........++.+.|+++ .|+++++.+.+...... ...++.+++|++.||+ |+||.+..+.+...+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444445555555556666777888875 79999999998877764 5566788999999998 9999988776655333
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSY 186 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~ 186 (225)
..........+. .......+....+.+++.+...+.......+..++++. +++.
T Consensus 288 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~g~~ 341 (390)
T TIGR02718 288 ALLWFAQAAFWL------------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ--------AGTD 341 (390)
T ss_pred HHHHHHHHHccc------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--------hHHH
Confidence 322222110000 01222333444455556666667777777777665332 7999
Q ss_pred HHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 187 FSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 187 ~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++..+...++|..+||.+.|++.|+.||+..|...++
T Consensus 342 ~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~ 378 (390)
T TIGR02718 342 VTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTV 378 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 9999999999999999999999999999888876654
No 114
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.34 E-value=1.4e-11 Score=109.44 Aligned_cols=169 Identities=13% Similarity=0.049 Sum_probs=131.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
.|.+|...+..+....++-++..++|.|++++++.++.+++...........+..+++|+++||+ |.+|+.....+.++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 46688888889999999999999999999999999999999999999999999999999999998 99999998888887
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+.+...... .+.+...+....+...+..|.-+.....++...+|++ -+
T Consensus 296 ~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~----------~G 348 (417)
T COG2223 296 LAAALLSLFLTGFG-----------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE----------TG 348 (417)
T ss_pred HHHHHHHccccccc-----------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh----------hh
Confidence 77776665431000 0123334444444455555555556677777777762 47
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIP 221 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~ 221 (225)
...++....+++|+..-|...+...+.+| +..+|++-
T Consensus 349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~ 386 (417)
T COG2223 349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLL 386 (417)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHH
Confidence 77888888899999888999999988887 77777643
No 115
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.33 E-value=3.2e-11 Score=110.95 Aligned_cols=155 Identities=12% Similarity=0.008 Sum_probs=123.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|......+..++....+++...++|.|+|+.+|+++.+++.......+...++.++.|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4444555566666667778888999999999999999999999999999999999999999998 999988888877777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+..... ..+.........+.|+|.|...+.......+..|+++ ++.
T Consensus 338 ~~~~l~~~~~---------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~---------~g~ 387 (495)
T PRK14995 338 SFYGLAMTDF---------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK---------AAA 387 (495)
T ss_pred HHHHHHHhcC---------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh---------cch
Confidence 7665554320 1122334556778888888887778888888888755 788
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
+.+.++...++|+.+|+.+.+.+.++
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999987543
No 116
>PTZ00207 hypothetical protein; Provisional
Probab=99.33 E-value=6.4e-11 Score=111.02 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=111.8
Q ss_pred HhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 041538 43 TGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPL 122 (225)
Q Consensus 43 ~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 122 (225)
|++..+. ..+++++|++..+.+++.+... ...+.+++.|+++||+ |||+++.++.+++.++.++++++.. ..
T Consensus 44 y~fsv~s-~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~-~~---- 115 (591)
T PTZ00207 44 YAFNLIS-GAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQ-EV---- 115 (591)
T ss_pred HHHHHHH-HHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhc-cc----
Confidence 4554444 4578899999999998887644 4445677899999998 9999999999999999998888631 00
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhh-H
Q 041538 123 ACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMV-A 201 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~-g 201 (225)
...+...+++.+.+.|+|.+...+.....+.++||+ + |+...++......+|+.+ +
T Consensus 116 -------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-~---------RG~a~Gi~~~~~gLGsaI~~ 172 (591)
T PTZ00207 116 -------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-N---------RGAVVAIMKTFTGLGSAILG 172 (591)
T ss_pred -------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-h---------hHHHHHHHHHHHHHHHHHHH
Confidence 013567788899999999888877788888999973 3 799999999999999975 6
Q ss_pred HHhhhheecccCcchhhhhhh
Q 041538 202 VTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~~f~~~~ 222 (225)
++..+++.+ +|+..|++.+
T Consensus 173 ~l~~~l~~~--~~~~~fl~l~ 191 (591)
T PTZ00207 173 SIQLAFFSD--NTSAYFFFLM 191 (591)
T ss_pred HHHHHHHHH--hHHHHHHHHH
Confidence 655666543 4666665544
No 117
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.32 E-value=2.8e-11 Score=120.89 Aligned_cols=154 Identities=10% Similarity=0.060 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhH--HHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITE--GTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
.....+...++..+...+....+..++..+++.+... .+++.+++.+...++++++|+++||+ ||||++.++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 3344444555555544444555556666666665443 57778888899999999999999998 99999998877665
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+..++..+... ..+...+++.+++.|++.+...+...+++.|.+|+++ |+
T Consensus 89 ~~~~~~~~~~~---------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---------r~ 138 (1146)
T PRK08633 89 GLTLLIVLAYY---------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN---------LS 138 (1146)
T ss_pred HHHHHHHHHHH---------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc---------ch
Confidence 55554444320 1235678889999999999999999999999999855 88
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
..+++.....++|.++|+.+++++.+.
T Consensus 139 ~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 139 RANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988765
No 118
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=6.4e-11 Score=105.07 Aligned_cols=157 Identities=11% Similarity=0.031 Sum_probs=115.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++....+.....++|.|++ +.|+++.+.+...........+..++.|++.||+ |+|+.+..+.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44454455555555666667778888986 5899999999988888888888899999999997 999998888877777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++...+ +...+++..++.+++.+...+....+..+. ++++ +++
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~---------~~~ 328 (382)
T PRK11128 283 RWGLMGSTT------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE---------VIR 328 (382)
T ss_pred HHHHHHhhh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh---------hHH
Confidence 665554432 345567777888888887777777766664 4323 466
Q ss_pred HHHHHH-HHHhhhhhhHHHhhhheecccCcchhhh
Q 041538 186 YFSWYY-VSVSASSMVAVTFIVYIQDNLGWKVGFG 219 (225)
Q Consensus 186 ~~~~~~-~~~~ig~~~g~~l~~~l~~~~g~~~~f~ 219 (225)
..+.++ ....+|..+||.++|++.|..|+. .|+
T Consensus 329 ~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~ 362 (382)
T PRK11128 329 LQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFW 362 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHH
Confidence 666665 456778789999999999988874 444
No 119
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=9e-11 Score=104.99 Aligned_cols=144 Identities=13% Similarity=0.050 Sum_probs=103.9
Q ss_pred HHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 041538 41 ASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHAR 120 (225)
Q Consensus 41 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~ 120 (225)
..+.+..++|.|+++ .|+++.+.+.......++..++.++.|+++||+ |||+.+..+.++..+....+....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 344567788999886 599999999888888899999999999999998 999998888776655544333222
Q ss_pred CCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhh
Q 041538 121 PLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMV 200 (225)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 200 (225)
......+.......+....+..+..+.++.|.+|++. |+++.+..+...++++.+
T Consensus 318 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~~~~~ 372 (426)
T PRK12307 318 ----------------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV---------RGLGTGLIYNLAATSGTF 372 (426)
T ss_pred ----------------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH---------HhhhhhHHHHHHhHHHHH
Confidence 0111111112222222233334556678889999855 899999999999999999
Q ss_pred HHHhhhheecccCcchh
Q 041538 201 AVTFIVYIQDNLGWKVG 217 (225)
Q Consensus 201 g~~l~~~l~~~~g~~~~ 217 (225)
+|.+.+++.++.|+...
T Consensus 373 gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 373 NSMAATWLGITMGLGAA 389 (426)
T ss_pred HHHHHHHHHHcccHHHH
Confidence 99999999988886543
No 120
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=2e-11 Score=109.44 Aligned_cols=163 Identities=16% Similarity=0.107 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++....++....+.+.|.+..++ ++.+.+.......+...++.++.++++||+ |||+++.++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 445555556666666666655556666665566 555666777777888899999999999998 999999998887777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.+.+.+.. .+...+++...+.+++.+...+...++++|..|.++.+ .+++.++.
T Consensus 300 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~ 354 (437)
T TIGR00792 300 GYLIFFFAG-----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWK--TGVRAEGL 354 (437)
T ss_pred HHHHHHHcc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--cCccchHH
Confidence 766655432 12344556667788888888888899999987743210 11233788
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
.++++++...+|..+++.+.+++.+..||.
T Consensus 355 ~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 355 VYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999999999999998877774
No 121
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.31 E-value=1e-10 Score=107.77 Aligned_cols=165 Identities=15% Similarity=0.084 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHH-HHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVL-FFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
+...+..++.....+....+.++|+.+++|+++.+.+.+. ....++..++.+++|+++||+ ||||.+.++.++..+..
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 3333333444455555667788898888999999999987 455678999999999999998 99998776665544444
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..+..... ...+...+.....+..+..|...+...++..+..+++. +++.+
T Consensus 304 l~~~~l~~--------------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~---------~~t~~ 354 (491)
T PRK11010 304 AGYWLLSI--------------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF---------SATQF 354 (491)
T ss_pred HHHHHHHh--------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------cHHHH
Confidence 33322110 01122223334444333334444556777888888765 57778
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++.+...++|..+++.+.|++.|..||+..|.+.++
T Consensus 355 gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~ 390 (491)
T PRK11010 355 ALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVA 390 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 888888899999898999999998999988876543
No 122
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.1e-11 Score=113.46 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=123.8
Q ss_pred HhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccccccc
Q 041538 55 REYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCES 134 (225)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 134 (225)
++++++++|.+.+.+....+..++++++|+++||+ |-|+++..+.++.+++..+..++...
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------ 126 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------ 126 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 36889999999999999999999999999999998 99999999999999999888887621
Q ss_pred ccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc-cC
Q 041538 135 ATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN-LG 213 (225)
Q Consensus 135 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~-~g 213 (225)
+...+++.|+++|++.|...|+...+.+++.|+.+ |++..+..+....+|.+++-.+.|++.+. .|
T Consensus 127 ----~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E---------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~G 193 (466)
T KOG2532|consen 127 ----GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE---------RSTFIAILTAGSQLGTIITMPVSGLLCESSLG 193 (466)
T ss_pred ----cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH---------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC
Confidence 22357899999999999999999999999999977 89999998888999999999999999888 89
Q ss_pred cchhhhhhhcc
Q 041538 214 WKVGFGIPAAI 224 (225)
Q Consensus 214 ~~~~f~~~~~~ 224 (225)
|++.|++.+++
T Consensus 194 W~sifY~~g~~ 204 (466)
T KOG2532|consen 194 WPSIFYVFGIV 204 (466)
T ss_pred CchHHHHHHHH
Confidence 99999977653
No 123
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.30 E-value=8.7e-11 Score=108.19 Aligned_cols=167 Identities=14% Similarity=0.101 Sum_probs=126.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh----ccchHH-HHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY----VGRYAM-IGF 98 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~~-~~~ 98 (225)
++|+....+...+......+.....+|.|+++ .|.|.++.+....+.. . .++.++.|.++||+ +||||. +..
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~~~-~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLVGQ-A-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHH-H-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 34556666677777777777778888888875 4999988887632222 2 36789999999994 288886 556
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCcc
Q 041538 99 GCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSK 178 (225)
Q Consensus 99 ~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~ 178 (225)
+.++..++...+.+.. ...+...+...+.+.+++.+...+...++..|.+|+++
T Consensus 87 ~~i~~~~~~~~~a~~~---------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~----- 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE---------------------PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE----- 140 (491)
T ss_pred HHHHHHHHHHHHHHcC---------------------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-----
Confidence 6666666666555543 11245567777778888888888889999999999755
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHHhhhheec-ccCcchhhhhhhc
Q 041538 179 SEGALKSYFSWYYVSVSASSMVAVTFIVYIQD-NLGWKVGFGIPAA 223 (225)
Q Consensus 179 ~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~-~~g~~~~f~~~~~ 223 (225)
|++..++...+.++|..+++.+.+++.+ ..||+..|++.++
T Consensus 141 ----rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~ 182 (491)
T PRK11010 141 ----RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAA 182 (491)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHH
Confidence 8888999999999999999999999888 4699999987654
No 124
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.30 E-value=9.9e-11 Score=108.23 Aligned_cols=125 Identities=17% Similarity=0.251 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHH
Q 041538 63 EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLML 142 (225)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (225)
+.+++.+...++..++.++.|.++|++ |||+.+.++.+++.+|.++..++. +...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~------------------------~~~~ 144 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP------------------------SWYQ 144 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh------------------------hHHH
Confidence 448999999999999999999999998 999999999999999999999876 5677
Q ss_pred HHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc--cCcchhhhh
Q 041538 143 LYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN--LGWKVGFGI 220 (225)
Q Consensus 143 ~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~--~g~~~~f~~ 220 (225)
++++|++.|+|.|......+.+++|.-|++. |+...+..+...++|..++ .+.++..++ .+||..+++
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~~~---------RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~ 214 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPAHI---------RGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGL 214 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCChhh---------hHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHH
Confidence 9999999999999999999999999999866 8999999999989888888 445544444 489977765
Q ss_pred hh
Q 041538 221 PA 222 (225)
Q Consensus 221 ~~ 222 (225)
..
T Consensus 215 ~~ 216 (513)
T KOG0254|consen 215 AL 216 (513)
T ss_pred HH
Confidence 44
No 125
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.29 E-value=8.3e-11 Score=104.41 Aligned_cols=158 Identities=11% Similarity=-0.095 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH-HHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL-LGM 107 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~-i~~ 107 (225)
+...+..+....++....+++|.|++ ++|+|..+.+.+.+.+.....+.+++.|.++||+ ||++.......... +..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 34445566666666667888999996 6799999999999999999999999999999998 98543322211111 111
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..+... .++.+.+++.+.+.+.+.+...|...++..+. + ++ |++.+
T Consensus 85 ~~~~~~-----------------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~~---------~~~~~ 130 (382)
T TIGR00902 85 AAFSAG-----------------------AHNAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-KQ---------FGLDY 130 (382)
T ss_pred HHHHHh-----------------------hhhHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-HH---------cCCCc
Confidence 111111 12456677778888888777777777776542 2 12 56667
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+......++|..++|.+.+++.+++||+..|.+.+
T Consensus 131 g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~ 165 (382)
T TIGR00902 131 GKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILT 165 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 78888899999999999999999999999887653
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.29 E-value=6.5e-12 Score=93.82 Aligned_cols=119 Identities=17% Similarity=0.235 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHH
Q 041538 70 FWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGL 149 (225)
Q Consensus 70 ~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 149 (225)
...+...++.++.|+++||+ ||||.+..+.....++...+.... +...+.+.+.+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 60 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIARFL 60 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHHHHH
Confidence 34566778899999999998 999999988888777776665433 34456677888
Q ss_pred HHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 150 MSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 150 ~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
.+++.+...+....+..|.+|+++ |++..+..+...++|..++|.+.+++.+..+|++.|.+.+
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEE---------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLA 124 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhh---------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHH
Confidence 888888888889999999999865 7889999999999999999999999988889988877644
No 127
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=7.2e-11 Score=107.24 Aligned_cols=158 Identities=15% Similarity=0.024 Sum_probs=119.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|......+..++....+.....+.|.|++..+|.++.+.+.......+...++.++.|+++||+ |||+.+..+.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3344455556666666655666778888888999999999998888888888889999999998 999999888877766
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++.... ...+...+.+..++.+++.+...+..+.+..+..|+++ ++.
T Consensus 340 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~ 389 (471)
T PRK10504 340 VSLLFMLVA---------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL---------ASS 389 (471)
T ss_pred HHHHHHhcc---------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh---------ccc
Confidence 655554422 01122333445566677777777788888889888755 788
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGW 214 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~ 214 (225)
.++++++...+|..+|+.+.+.+.+..|+
T Consensus 390 ~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 390 GNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 89999999999999999999988776655
No 128
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.29 E-value=4.6e-11 Score=119.67 Aligned_cols=136 Identities=12% Similarity=0.035 Sum_probs=103.3
Q ss_pred HHhHhcCCchh-HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH--HHHHHHHHHHHhhhcCCCCCCcccccc
Q 041538 52 YLCREYNMKIT-EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI--TCLLGMVLLWLTTIFPHARPLACDYTL 128 (225)
Q Consensus 52 yl~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~--~~~i~~~~l~~~~~~~~~~~~~~~~~~ 128 (225)
.+++..+.+.. ..+++...+.+...++++++|+++||+ ||||++..... ........+.+..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 34444444333 356677788888999999999999998 99997643222 2211222222211
Q ss_pred ccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 129 RDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
.+...+++.++++|++.+...|...+++.|++|+++ |+.+.++.+.+.++|.++||.++|++
T Consensus 106 ---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~---------~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 106 ---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE---------LLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc---------cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 246678899999999999999999999999999865 78899999999999999999999999
Q ss_pred ecccCcchhhhh
Q 041538 209 QDNLGWKVGFGI 220 (225)
Q Consensus 209 ~~~~g~~~~f~~ 220 (225)
.+..||++.|..
T Consensus 168 ~~~~~~~~~~~~ 179 (1140)
T PRK06814 168 TISGNFVILVAL 179 (1140)
T ss_pred HhccccHHHHHH
Confidence 988899988743
No 129
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=6.8e-11 Score=105.18 Aligned_cols=162 Identities=6% Similarity=0.001 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREY---NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
++...+..+.....+.....+.+.|+++.+ +.+..+.+.+.+...+...++.+..|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 333344444444455555567788888765 45566677778888888888899999999998 99999988887777
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++........ ++..+++...+.+++.+........+..+..|++. ++
T Consensus 296 l~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~a 342 (396)
T TIGR00882 296 VRIIGSSFAT------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL---------SA 342 (396)
T ss_pred HHHHHHHhcC------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce---------EE
Confidence 7665544332 23445666667777655444444445555555533 44
Q ss_pred HHHHH-HHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSW-YYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~-~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+..+. +++...+|+.++|.+.|++.|..||+..|.+.++
T Consensus 343 t~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~ 382 (396)
T TIGR00882 343 TIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGC 382 (396)
T ss_pred EeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHH
Confidence 54444 5678999999999999999998999999987665
No 130
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.29 E-value=9e-11 Score=104.82 Aligned_cols=158 Identities=9% Similarity=0.058 Sum_probs=107.6
Q ss_pred HHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 041538 42 STGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARP 121 (225)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 121 (225)
......+.|. ..+++|++..+.+.......+...++.+++|+++||+ |||+.+..+.++..++..++.+...... +
T Consensus 300 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 375 (481)
T TIGR00879 300 INAIMYYSPT-IFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--T 375 (481)
T ss_pred CeehHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc--C
Confidence 3334444444 4457799998888888888999999999999999998 9999998887777777666653221000 0
Q ss_pred CccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhH
Q 041538 122 LACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVA 201 (225)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 201 (225)
+ .........+........+.+.+ ..+....+..|.+|+++ |++..+..+...++|+.++
T Consensus 376 ~----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~lg~~i~ 435 (481)
T TIGR00879 376 G----------SSKSSGNVAIVFILLFIAFFAMG-WGPVPWVIVSEIFPLSL---------RPKGISIAVAANWLANFIV 435 (481)
T ss_pred C----------cccchhHHHHHHHHHHHHHHHcc-ccCeehhhhhccCChHH---------HHHHHHHHHHHHHHHHHHH
Confidence 0 00000111112222222223322 34566677799999855 8999999999999999999
Q ss_pred HHhhhheecccCcchhhhhhhc
Q 041538 202 VTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
|.+.+++.++.+|++.|++.++
T Consensus 436 ~~~~~~~~~~~~~~~~f~~~~~ 457 (481)
T TIGR00879 436 GFLFPTMLESIGVGGVFIFFGG 457 (481)
T ss_pred HHHHHHHHHhcCccceehhHHH
Confidence 9999999888899887776543
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.28 E-value=2e-10 Score=105.61 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=135.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccch--HHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRY--AMIGFGCI 101 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr--~~~~~~~~ 101 (225)
+.|.+..-++..++.+-+..++......|.++++|++..+...+..+..+...++.++.|++.||+ |.| +++..+.+
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 346666666677777777888899999999999999999999999999999999999999999998 999 88877766
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..+..+.-.+ ...+... ...+.+.+++.-.+.|+..|..++..-++.+++.|+++
T Consensus 358 ~~~~i~~~g~~-G~~~~~~---------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~-------- 413 (477)
T PF11700_consen 358 LWIIIPLYGLF-GFWPSFF---------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR-------- 413 (477)
T ss_pred HHHHHHHHHHH-Hhhhccc---------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch--------
Confidence 55332222221 0000000 01244557777778999999999999999999999966
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIP 221 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~ 221 (225)
.+..|+++.+....++.+||.+.+.+.+.+| .|.++...
T Consensus 414 -e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l 453 (477)
T PF11700_consen 414 -EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFL 453 (477)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 6999999999999999999999999988886 66666543
No 132
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.28 E-value=8.5e-11 Score=104.26 Aligned_cols=150 Identities=13% Similarity=0.033 Sum_probs=109.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccch----HHHHHHHHHHHHHHHH
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRY----AMIGFGCITCLLGMVL 109 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr----~~~~~~~~~~~i~~~~ 109 (225)
..+....++..+.+++|.|++ ++|.|..+.+++.+...+...+++++.|.++||+ ||+ |.+.+..... ...
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~ 86 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVA 86 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHH
Confidence 345555666677888999996 5799999999999999999999999999999998 984 3322221111 111
Q ss_pred HHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHH
Q 041538 110 LWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSW 189 (225)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~ 189 (225)
+... .++.+.+++.+.+.+++.+...+...++..+..++ |+..++.
T Consensus 87 ~~~~-----------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~-----------~~~a~~~ 132 (382)
T PRK11128 87 FWFG-----------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ-----------IGLDYGK 132 (382)
T ss_pred HHHh-----------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh-----------ccCCcch
Confidence 1111 12456677788888888888888777777765222 3444555
Q ss_pred HHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 190 YYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 190 ~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
.+...++|..+||.+++++.+++||+..|+..+
T Consensus 133 ~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 133 VRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 566678999999999999999999999987654
No 133
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.28 E-value=1.2e-10 Score=102.18 Aligned_cols=162 Identities=12% Similarity=0.090 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+...+........++....+.|.|+++++|+++.+.+.+.....+...++.++.|++.||+ |||+.+..+.++..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34444444445555667777888999999999999999999999999999999999999998 99999888877777766
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++......+ ............+.+++.+...+.......|..|+ + +++..
T Consensus 287 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~---------~g~~~ 337 (385)
T TIGR00710 287 VLLEITAILG-------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-V---------AGTAS 337 (385)
T ss_pred HHHHHHHHhc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-c---------chHHH
Confidence 6655533111 01233345555667777777777777777777653 3 67778
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFG 219 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~ 219 (225)
+.++.....++.+.+.+.+.+.+..+|...+.
T Consensus 338 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccChHHHHHH
Confidence 87776665444444444556655545554443
No 134
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=6.1e-11 Score=107.18 Aligned_cols=164 Identities=13% Similarity=0.142 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH-
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL- 105 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i- 105 (225)
.++...+..++.....+++..++|.|+++..|+++.++++......+...++.+++|+++||+ |++|....+.....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 344444555566666778889999999998999999999999999999999999999999997 755432333222211
Q ss_pred --HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 106 --GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 106 --~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
+...+.... ..+........+..+.+.............|.+|+++ |
T Consensus 331 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~ 379 (438)
T TIGR00712 331 TIAVIVYWMNP----------------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA---------A 379 (438)
T ss_pred HHHHHHHHhcC----------------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh---------e
Confidence 111111111 0112222333334444322222222345678888755 7
Q ss_pred HHHHHHHHHHHhhhh-hhHHHhhhheecccCcchhhhhhh
Q 041538 184 KSYFSWYYVSVSASS-MVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~-~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
+++.++++...++++ .++|.+.|++.|+.||...|.+..
T Consensus 380 g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~ 419 (438)
T TIGR00712 380 GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 419 (438)
T ss_pred eeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHH
Confidence 888999888888875 689999999999999988886543
No 135
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.27 E-value=7.1e-11 Score=103.33 Aligned_cols=143 Identities=15% Similarity=0.091 Sum_probs=104.3
Q ss_pred HHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh----ccchHHH-HHHHHHHHHHHHHHHHhhhcCCCCCC
Q 041538 48 NMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY----VGRYAMI-GFGCITCLLGMVLLWLTTIFPHARPL 122 (225)
Q Consensus 48 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~~~-~~~~~~~~i~~~~l~~~~~~~~~~~~ 122 (225)
.+|.+ .+++|+|.++.+..... .....+ .++.|.++||+ +||||.+ ..+.+...+....+.+..
T Consensus 10 ~~~~~-~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-------- 78 (356)
T TIGR00901 10 TLPYW-LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-------- 78 (356)
T ss_pred HHHHH-HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC--------
Confidence 34444 45789999999988655 333333 88999999996 3899975 455555555554444432
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH
Q 041538 123 ACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV 202 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~ 202 (225)
...+...+....++.+.+.+...+...+++.|.+|+++ |+.+.++...+.++|.++++
T Consensus 79 -------------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---------r~~~~~~~~~~~~~G~~~~~ 136 (356)
T TIGR00901 79 -------------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE---------LGYGSTIYIVGYRAGMLLSG 136 (356)
T ss_pred -------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh---------hchHHHHHHHHHHHHHHHHH
Confidence 01233444555556667777778889999999998755 78888999999999999999
Q ss_pred HhhhheecccC--------cchhhhhhhc
Q 041538 203 TFIVYIQDNLG--------WKVGFGIPAA 223 (225)
Q Consensus 203 ~l~~~l~~~~g--------~~~~f~~~~~ 223 (225)
.+++++.++.| |+..|++.++
T Consensus 137 ~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 137 SLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHhhhcccccccccccHHHHHHHHH
Confidence 99998888888 9999987654
No 136
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.27 E-value=1.5e-10 Score=103.39 Aligned_cols=157 Identities=14% Similarity=0.092 Sum_probs=118.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh----ccchH-HHHHHHHHHHHHHH
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY----VGRYA-MIGFGCITCLLGMV 108 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~-~~~~~~~~~~i~~~ 108 (225)
..+.....+.....-+|.|++++ |+|.++.+.+..+... .+..++.|+++||+ +|||| .+.++.+...++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 45555666666778889999965 9999999988666654 58899999999996 27776 67777777776666
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
.+.+.. ...+...++....+.+...+...+...+++.|.+|+++ |++..+
T Consensus 84 ~l~~~~---------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~---------r~~~~~ 133 (402)
T PRK11902 84 AMAFCP---------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE---------RGAGAA 133 (402)
T ss_pred HHHhcC---------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---------hhHHHH
Confidence 665542 01234445555555667777788899999999998865 788888
Q ss_pred HHHHHHhhhhhhHHHhhhheecc-cCcchhhhhhhc
Q 041538 189 WYYVSVSASSMVAVTFIVYIQDN-LGWKVGFGIPAA 223 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l~~~-~g~~~~f~~~~~ 223 (225)
....+.++|..+++.+.+++.+. .||+..|++.++
T Consensus 134 ~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~ 169 (402)
T PRK11902 134 VKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAG 169 (402)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHH
Confidence 88888899999999999988775 499999987554
No 137
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.26 E-value=1.2e-10 Score=103.39 Aligned_cols=161 Identities=11% Similarity=0.039 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMV 108 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~ 108 (225)
+......++.....+.+..++++|+++.+|+++.+.+.......+...++.++.|++.||+ |+|+.+..+..+..++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHH
Confidence 3333333344444455667778899888999999999999999999999999999999997 999998888777776665
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
++.... .+.....+...+.+.+.....+.......+..++++ .++..
T Consensus 281 ~~~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~-- 327 (382)
T PRK10091 281 MLFFFG-----------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE--------LLGAA-- 327 (382)
T ss_pred HHHHHH-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch--------HHHHH--
Confidence 544322 011223333334444443333333333344333222 13333
Q ss_pred HHHHHHhhhhhhHHHhhhheecc-cCcchhhhhhhc
Q 041538 189 WYYVSVSASSMVAVTFIVYIQDN-LGWKVGFGIPAA 223 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l~~~-~g~~~~f~~~~~ 223 (225)
..+...++|..+||.++|++.|. .+|++.+...++
T Consensus 328 ~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~ 363 (382)
T PRK10091 328 GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAAL 363 (382)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHH
Confidence 23566789999999999998885 588888876543
No 138
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.26 E-value=4.1e-11 Score=107.39 Aligned_cols=163 Identities=11% Similarity=0.132 Sum_probs=116.9
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHH-HHHHHHHHHHHHHHH
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAM-IGFGCITCLLGMVLL 110 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~-~~~~~~~~~i~~~~l 110 (225)
.+........+.++++.|+++++|+++.+.+.+..+..+...+..++.|+++||. +||||. +..+.....++..++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 3455566667778899999999999999999999999999999999999999983 388664 556666777676666
Q ss_pred HHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHH
Q 041538 111 WLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWY 190 (225)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~ 190 (225)
......+ .......+++...+.+++.+....+..++..|..+++++ |++..++.
T Consensus 88 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~--------R~~~~~~~ 141 (437)
T TIGR00792 88 FTTPDFS------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE--------RESLSTFR 141 (437)
T ss_pred HhCCCCC------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH--------HHHHHHHH
Confidence 5543111 112234455556667777777777778888888754332 88888888
Q ss_pred HHHHhhhhhhHHHhhhhee-------cccCcchhhhhhhc
Q 041538 191 YVSVSASSMVAVTFIVYIQ-------DNLGWKVGFGIPAA 223 (225)
Q Consensus 191 ~~~~~ig~~~g~~l~~~l~-------~~~g~~~~f~~~~~ 223 (225)
+...++|+.+++.+.+.+. +..||++.+.+.++
T Consensus 142 ~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 142 RFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 8888888777666554432 24589887765543
No 139
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.26 E-value=9.5e-11 Score=105.63 Aligned_cols=165 Identities=16% Similarity=0.167 Sum_probs=133.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|......+..++.........+..+.|.+..+|.+ ...+.......+...++.++.++++||+ |+||++..+.++..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55566677777777777777778888888888877 4556667778888889999999999998 999999999999988
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+.+.. .++...+++...+.+++.+......+++++|..+.++. +.+++..+.
T Consensus 303 ~~~~~~~~~----------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~--~tg~r~~g~ 358 (428)
T PF13347_consen 303 GFLLLFFLG----------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEW--KTGRRREGM 358 (428)
T ss_pred HHHHHHHHH----------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHH--hcCCCchHH
Confidence 888777754 13567788888999999999999999999999986542 133344688
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcch
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKV 216 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~ 216 (225)
.++.+.+...++.++++.+.+.+.+..|+..
T Consensus 359 ~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~ 389 (428)
T PF13347_consen 359 YFSVNSFFIKIGQGLAGAIVGLLLALVGYDA 389 (428)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHhCcCC
Confidence 8889999999999999999998877666653
No 140
>PRK09848 glucuronide transporter; Provisional
Probab=99.26 E-value=4.4e-11 Score=108.36 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=124.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+....+..++....++......+.|+++.+|.++...........+...++.++.++++||+ |+|+++.++.+++.+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455555566666666666777778888888898776666555544566778899999999998 999999999888888
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.+.+.+.. ..+...+++...+.++|.+...+...++.+|..|.++. +.+++.++.
T Consensus 307 ~~~~~~~~~----------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~--~~g~r~~G~ 362 (448)
T PRK09848 307 GYLLFFWVS----------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY--LTGVRIEGL 362 (448)
T ss_pred HHHHHHHcC----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH--hhCccchhH
Confidence 776665432 12344566667788899888888999999998886542 123344688
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
.++.+++...+|..+|+.+.+.+.+..||.
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 889999999999999999999887776764
No 141
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.8e-10 Score=102.69 Aligned_cols=164 Identities=13% Similarity=0.034 Sum_probs=127.9
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
+++.++...+..++...+.|...+|+-+++++..|+|.+..+++...+.++..++..++|+++|| +.|+.+....++.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 34667788888888899999999999999999999999999999999999999999999999999 7888888877766
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccC--CCCCCCccchh
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLE--KGDGIKSKSEG 181 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p--~~~~~~~~~~~ 181 (225)
++....+.+.. ++.........+.++..... .+....+..+ +++
T Consensus 287 a~~~l~l~~~~-----------------------~~~~~~~~~~~~wg~a~~~~---~~~~~~~~a~~~p~~-------- 332 (394)
T COG2814 287 ALALLALTFTG-----------------------ASPALALALLFLWGFAFSPA---LQGLQTRLARLAPDA-------- 332 (394)
T ss_pred HHHHHHHHHhc-----------------------chHHHHHHHHHHHHHHhhhh---hhHHHHHhcccCCCc--------
Confidence 66666555543 23344444445555554433 3444444444 222
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhcc
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAAI 224 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~~ 224 (225)
++...+++....|+|-.+|..++|.+.|+.|+....+..+++
T Consensus 333 -~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l 374 (394)
T COG2814 333 -ADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAAL 374 (394)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Confidence 688888889999999999999999999999998888776653
No 142
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.25 E-value=1.8e-10 Score=100.61 Aligned_cols=123 Identities=19% Similarity=0.230 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhC
Q 041538 75 SNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGG 154 (225)
Q Consensus 75 ~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~ 154 (225)
..+++++.|+++||+ ||||++..+.++..++..+..+..+.+.. .......+++.+.+.|++.
T Consensus 48 ~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~r~l~G~~~ 110 (394)
T TIGR00883 48 RPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI----------------GIWAPILLLLARLIQGFSL 110 (394)
T ss_pred hhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh----------------HHHHHHHHHHHHHHHHhhc
Confidence 346789999999998 99999999999888888877765521110 0011235778889999999
Q ss_pred cccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee--------cccCcchhhhhhhc
Q 041538 155 GGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ--------DNLGWKVGFGIPAA 223 (225)
Q Consensus 155 g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~--------~~~g~~~~f~~~~~ 223 (225)
+...+..+.++.|.+|+++ |+...+..+....+|..+++.+...+. +..+|++.|.+.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 178 (394)
T TIGR00883 111 GGEWGGAALYLAEYAPPGK---------RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAV 178 (394)
T ss_pred cccccccHHHhhhcCCccc---------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHH
Confidence 9988999999999998865 788888888888899888888776543 34689988876543
No 143
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=1.1e-10 Score=103.94 Aligned_cols=168 Identities=13% Similarity=0.100 Sum_probs=130.0
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH
Q 041538 20 NPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFG 99 (225)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (225)
.++.++|.+++........... ..+...+..++.+++|+|+.|.+++..+-.+...+..++-|.+.||+ |.|++..++
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~V-W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s 85 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMV-WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILS 85 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHH-HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHH
Confidence 3456678777655543333333 33445555677799999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.++.++-++.+.++...| +...+++...+.|++-+ ..++..+.+++.|||++
T Consensus 86 ~~l~~IP~~~~~~a~~~~---------------------~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~------ 137 (417)
T COG2223 86 MLLLLIPCLGLAFAVTYP---------------------STWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEK------ 137 (417)
T ss_pred HHHHHHHHHHHHHHccCC---------------------chHHHHHHHHHHhcccc-eehcccccccccCChhh------
Confidence 999888888888876322 12346666666676644 56778888999999976
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhheecccC---cchhhhhh
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG---WKVGFGIP 221 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g---~~~~f~~~ 221 (225)
.+.+.+++. .+|+|..+...+++++....| |+..-.+.
T Consensus 138 ---qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~ 178 (417)
T COG2223 138 ---QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIY 178 (417)
T ss_pred ---hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 688888888 999999999999999988888 76655443
No 144
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.23 E-value=3.6e-10 Score=100.74 Aligned_cols=160 Identities=11% Similarity=-0.047 Sum_probs=115.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
.++...+...+.....+.+..+.|.|+++++|+++.+.+........+..++.++.|+++||+ |+||.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444444444555556677788999989999999988887777778888999999999998 9999998888777777
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSY 186 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~ 186 (225)
..++....... ..+...+++...+.+++.+...+..+...... ++++ +++.
T Consensus 295 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~---------~g~~ 345 (406)
T PRK15402 295 LLLAALATVIS-------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS---------KGTV 345 (406)
T ss_pred HHHHHHHHHcc-------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc---------ccHH
Confidence 76665533110 12334456677778888776666555544332 3333 7899
Q ss_pred HHHHHHHHhhhhhhHHHhhhheecccCcch
Q 041538 187 FSWYYVSVSASSMVAVTFIVYIQDNLGWKV 216 (225)
Q Consensus 187 ~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~ 216 (225)
++.++....++..+|+.+.+++.+..++..
T Consensus 346 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 346 SAAMGMLSMLIFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence 999999999999999999999988766543
No 145
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.22 E-value=8.4e-11 Score=101.42 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMK-ITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVL 109 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~ 109 (225)
.....+.....++....++|.|+++++|++ ..+.+.......+...++.++.|+++||+ |+|+..........++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444555555566778899999999999999 88999999999999999999999999997 9988888777766666655
Q ss_pred HHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHH
Q 041538 110 LWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSW 189 (225)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~ 189 (225)
+.+... ..+....+....+.+++.+...+....++.|.+|+++ |++..+.
T Consensus 290 ~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~ 339 (352)
T PF07690_consen 290 LLLLPF---------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY---------RGTAFGL 339 (352)
T ss_dssp HCCSHH---------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH---------HHHHHHH
T ss_pred HHHHHH---------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHH
Confidence 554331 1134456667777888888889999999999998855 8999999
Q ss_pred HHHHHhhhhhhHH
Q 041538 190 YYVSVSASSMVAV 202 (225)
Q Consensus 190 ~~~~~~ig~~~g~ 202 (225)
.+...++|+.+||
T Consensus 340 ~~~~~~~~~~igP 352 (352)
T PF07690_consen 340 FNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999987
No 146
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.21 E-value=2.1e-10 Score=105.28 Aligned_cols=164 Identities=11% Similarity=0.111 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHh----hccchHHHHHH-HHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADS----YVGRYAMIGFG-CIT 102 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr----~~Grr~~~~~~-~~~ 102 (225)
++.+....+...+.+-.-.+++++|++ ++|.++.+.+.+.....+...+.+++.|+++|| + ||||.++.+ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 444444555666666666777777764 799999999999999999999999999999995 6 999998875 445
Q ss_pred HHHHHHHHHHhhhcCCCCCCcccccccccccccc-chhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESAT-GSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
.+++..++.+..+......+ ...... ........++..+.-+.....++...++++|..|+++|
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~--------~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~------- 148 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGD--------NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR------- 148 (477)
T ss_pred HHHHHHHHHhCchhhhhccc--------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH-------
Confidence 55665666554321110000 000000 00112344444455566677778889999999998763
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
.++.++++.+...++|+.+|+.++++.
T Consensus 149 ~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 149 RTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 146788888999999999999988764
No 147
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.21 E-value=7.9e-10 Score=98.82 Aligned_cols=162 Identities=11% Similarity=-0.008 Sum_probs=111.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..+......++...+.++++.+++|+++.+.+.+.....++..++.++.|++.||. +| +.+....++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~-~~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VK-LALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch-hHHHHHHHHHHH
Confidence 4455444444555555556666765555567899999999999989999999999999999995 54 443433333333
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
..+++.... .+...+.....+.|++.+...+..+.++.+..|+ + +++
T Consensus 294 ~~~~l~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~---------~~~ 340 (394)
T PRK10213 294 SALVLTLWG-----------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q---------AEK 340 (394)
T ss_pred HHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c---------HHH
Confidence 322222221 1234556677778888888888888888888774 2 334
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
..+.++...++|..+||.+.|++.|..|++..+...+
T Consensus 341 ~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~ 377 (394)
T PRK10213 341 AGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSG 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHH
Confidence 4455566778999999999999999889888777654
No 148
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.20 E-value=5.7e-10 Score=101.38 Aligned_cols=166 Identities=14% Similarity=-0.032 Sum_probs=109.3
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHH--------
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMI-------- 96 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~-------- 96 (225)
++.++...+..++....++....++|.|+++++|++..+++....+..++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 34566667777888888888899999999999999999999999999999999999999999997 644321
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCC
Q 041538 97 GFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIK 176 (225)
Q Consensus 97 ~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~ 176 (225)
..+......+...+.... ...+.....+.+.+.+.+.+...+.......|..|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----- 392 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY---------------------LSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR----- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHH---------------------cCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-----
Confidence 111111111111111111 001222233334444444444444443344444443
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhHHHhhhheeccc---Ccchhhhhhh
Q 041538 177 SKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNL---GWKVGFGIPA 222 (225)
Q Consensus 177 ~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~---g~~~~f~~~~ 222 (225)
.++...++.+...++++.++|.+.+++.+.. +|+.+|.+.+
T Consensus 393 -----~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~ 436 (465)
T TIGR00894 393 -----FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMA 436 (465)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHH
Confidence 2799999999999999999999999987653 3777776654
No 149
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.19 E-value=4.5e-11 Score=105.75 Aligned_cols=136 Identities=17% Similarity=0.110 Sum_probs=122.8
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccc
Q 041538 56 EYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESA 135 (225)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (225)
..+-.+++.+++.....+...+..++.|.+.||+ |+|-.+.++........+++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 3556778889999999999999999999999997 999999999988888888888866
Q ss_pred cchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 136 TGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 136 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
+..++.++|.++|+|.+....+..++++|.||++++ |+++.+..-....+|-.+||.++|.+.+..|++
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e--------r~~vmGialgfislG~lvgPpfGGilYe~~Gk~ 226 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE--------RGSVMGIALGFISLGVLVGPPFGGILYEFAGKS 226 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh--------hhHHHHHHHHHHhccceecCCcccchHhhcCCc
Confidence 456799999999999999999999999999998775 899999998899999999999999999999999
Q ss_pred hhhhhhhcc
Q 041538 216 VGFGIPAAI 224 (225)
Q Consensus 216 ~~f~~~~~~ 224 (225)
..|.+.+++
T Consensus 227 aPFlVL~~v 235 (464)
T KOG3764|consen 227 APFLVLAIV 235 (464)
T ss_pred CcHHHHHHH
Confidence 999887654
No 150
>PRK10133 L-fucose transporter; Provisional
Probab=99.18 E-value=3.7e-10 Score=102.56 Aligned_cols=160 Identities=14% Similarity=0.053 Sum_probs=116.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHH-hHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYL-CREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
|..+...+..++.....++...+.+.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ ||||++..+.++.+
T Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~ 336 (438)
T PRK10133 258 RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAM 336 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence 3333444444555556666677888885 667899999999999999999999999999999997 99999888876666
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++..+..+.. +. .......+.+++.+...|...+...+.+|++. +
T Consensus 337 ~~~~~~~~~~------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~----------~ 381 (438)
T PRK10133 337 ALCLISAFAG------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT----------K 381 (438)
T ss_pred HHHHHHHHcC------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh----------c
Confidence 5554433322 11 12445677889999999999999999888643 2
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPA 222 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~ 222 (225)
.+.++.. ...+|+.++|.+.|++.|..| -+..|++..
T Consensus 382 ~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~ 419 (438)
T PRK10133 382 YGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPA 419 (438)
T ss_pred cchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHH
Confidence 2233332 344678899999999988887 677776543
No 151
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.18 E-value=4.9e-10 Score=104.95 Aligned_cols=141 Identities=12% Similarity=0.118 Sum_probs=110.1
Q ss_pred HHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 041538 47 PNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDY 126 (225)
Q Consensus 47 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 126 (225)
.....+..+++|-+ ....|+.+.+.+...+..++.|.++|.+ |||..++.+.++.++|.++.+-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456777888865 5566778889999999999999999998 999999999999999999888655
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 127 TLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
+...++.+..+.|+|.|... .....++|..|.+. |..+........-+....+|.++.
T Consensus 130 ------------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~---------R~~~~~~~~~~~i~~~~~~~~ia~ 187 (599)
T PF06609_consen 130 ------------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW---------RGLGLAIASIPFIITTWISPLIAQ 187 (599)
T ss_pred ------------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch---------hhhHhHHHHHHHHhhhcccHHHHH
Confidence 45668999999999977654 45667899998744 555555555555555556777777
Q ss_pred heecccCcchhhhhhhc
Q 041538 207 YIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 207 ~l~~~~g~~~~f~~~~~ 223 (225)
.+..+.+|||.|++..+
T Consensus 188 ~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 188 LFAAHSGWRWIFYIFII 204 (599)
T ss_pred HhccCCCcchHHHHHHH
Confidence 77667799999987654
No 152
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.17 E-value=3.2e-10 Score=104.35 Aligned_cols=146 Identities=14% Similarity=0.050 Sum_probs=94.8
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHH------------HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTN------------VLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
.+.....+|+...+.|.+++ +.|++..++.. ...+..+...++.+++++++||+ |||+.+..+.++
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~ 374 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHH
Confidence 34455677888888888886 56876543221 12223334555778899999998 999998888777
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
..++..++...... .... ............+..+..+....+.+|.+|++.
T Consensus 375 ~~~~~~~l~~~~~~-------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~--------- 425 (502)
T TIGR00887 375 LTVLFFVLGFAYNH-------------------LSTH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY--------- 425 (502)
T ss_pred HHHHHHHHHHHHHh-------------------cchh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH---------
Confidence 76666555543200 0001 111111111122222234556677899999955
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
|+++.++.+....+++.++|.+.+++.+.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 89999999999999999999999988774
No 153
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.16 E-value=1.2e-09 Score=99.95 Aligned_cols=174 Identities=12% Similarity=0.054 Sum_probs=117.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+|...+..++....|.++..++|.|+++.+ +.........+..+...+..+++|+++||+ |+||++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 45677777788888888888889999998765 333344445556778888999999999998 999999998886666
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCC-CCC---------
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKG-DGI--------- 175 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~-~~~--------- 175 (225)
+...+.... |. ....+...+....+...++.|..+.+...++.+.||+. .+.
T Consensus 329 ~~~~~~l~l--p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~ 390 (462)
T PRK15034 329 FSALLFLTL--PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDE 390 (462)
T ss_pred HHHHHHHHh--cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchh
Confidence 654433322 11 01123455555555555666666777888888888741 100
Q ss_pred --CccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhh
Q 041538 176 --KSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGI 220 (225)
Q Consensus 176 --~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~ 220 (225)
....++.-+.+.++....+.+|+.+-|.+.+...+.+| +..+|+.
T Consensus 391 ~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~ 438 (462)
T PRK15034 391 QAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKV 438 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHH
Confidence 00112245777888888899999999988887766654 6555543
No 154
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.16 E-value=1.6e-09 Score=94.80 Aligned_cols=144 Identities=12% Similarity=0.035 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHH-HHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWS-AASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
++...+..++....++...+++|.|+++ +|+++.+.+.+..... +...++.+++|+++||+ ||||.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5555556666677788888999999987 8999999988777655 56788999999999998 9999988888777666
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSY 186 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~ 186 (225)
...+.+..+...- .+....+...+....++.+++.+...+...+++.|.+|++. |++.
T Consensus 289 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~---------~g~~ 346 (356)
T TIGR00901 289 NAGFVWLASNGHH-------------DGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF---------GATQ 346 (356)
T ss_pred HHHHHHHHhcCcc-------------cccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc---------cHHH
Confidence 5544433100000 00000233456666777888889899999999999999976 7999
Q ss_pred HHHHHHHHh
Q 041538 187 FSWYYVSVS 195 (225)
Q Consensus 187 ~~~~~~~~~ 195 (225)
+++++...+
T Consensus 347 ~g~~~~~~~ 355 (356)
T TIGR00901 347 MALLSSLSA 355 (356)
T ss_pred HHHHHHHHh
Confidence 998776654
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.13 E-value=8.1e-10 Score=101.26 Aligned_cols=161 Identities=9% Similarity=0.095 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-----HHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYA-----MIGFGCITC 103 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-----~~~~~~~~~ 103 (225)
+...+..+......+....++|.|+.+++|+++.+++.+.....+...++.+++|+++||+ |||+ .........
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHH
Confidence 3333333344444456677899999999999999999999999999999999999999998 8762 222211111
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
..+...+.+.. ..+.....+...+.+++.+...+...++..+..| +. +
T Consensus 334 l~~i~~~~~~~----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~---------~ 381 (476)
T PLN00028 334 LGGVFCIWLGR----------------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS---------L 381 (476)
T ss_pred HHHHHHHHhcc----------------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh---------c
Confidence 11111122111 0122223333444444443333344444555433 22 6
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+...++.+...++|+.++|.+.+ ..+..+|+.+|.+.++
T Consensus 382 g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~ 420 (476)
T PLN00028 382 GVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGV 420 (476)
T ss_pred hhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHH
Confidence 88888877777777777766654 2233468888877654
No 156
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=1.4e-09 Score=97.03 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=92.5
Q ss_pred HHHHHHHhHhcCCchhHHHHHHHHHH-HHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 041538 47 PNMILYLCREYNMKITEGTNVLFFWS-AASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACD 125 (225)
Q Consensus 47 ~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 125 (225)
.+.+.++.+++|+++.+.+.+..... ....++.+++|++.||+ ||||.+..+.+...+....+......
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~--------- 299 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT--------- 299 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 34456778889999999998876544 45788899999999998 99998877766555544333221100
Q ss_pred cccccccccccchhHHHHHHHH----HHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhH
Q 041538 126 YTLRDSCESATGSQLMLLYLAF----GLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVA 201 (225)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 201 (225)
.++...++... +..+++.+...+....++.+.+|.++ + +.++...+++..++
T Consensus 300 -----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~l~~~~~ 355 (402)
T PRK11902 300 -----------PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ---------Y----ALLSALASVGRVYV 355 (402)
T ss_pred -----------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH---------H----HHHHHHHHHHHHHH
Confidence 01223333333 23445555556666666666666432 3 33444456677666
Q ss_pred HHhhhheecccCcchhhhhhhc
Q 041538 202 VTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.++|++.|..||+..|.+.++
T Consensus 356 ~~~~G~l~~~~G~~~~f~~~~~ 377 (402)
T PRK11902 356 GPTSGYLVEAYGWPGFYLMTVV 377 (402)
T ss_pred HHHHHHHHHHhChHHHHHHHHH
Confidence 6789999999999988877654
No 157
>PRK10054 putative transporter; Provisional
Probab=99.12 E-value=6.1e-10 Score=99.57 Aligned_cols=164 Identities=15% Similarity=0.054 Sum_probs=115.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHh--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCRE--YNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
|.++...+..++....+.....+.+.|+... .+.+....+.............++..|++.||+ ++|+.+..+.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 3444444455555555555555667776543 455566667777777777777788889999997 9999988887777
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.++...+.... ++...+.++..+.++|.+...|.....+.+..|++. |
T Consensus 285 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~---------~ 332 (395)
T PRK10054 285 VIGLVGFIFSG-----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM---------K 332 (395)
T ss_pred HHHHHHHHHcc-----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc---------c
Confidence 77765554422 134445566778888887777788888888888755 5
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
++.++.++ ...+|..+||.++|++.|+.|.+..|.+.++
T Consensus 333 ~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~ 371 (395)
T PRK10054 333 ASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILAL 371 (395)
T ss_pred eehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHH
Confidence 66666543 5668999999999999999998887776543
No 158
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.11 E-value=4.9e-10 Score=103.46 Aligned_cols=132 Identities=11% Similarity=0.028 Sum_probs=114.8
Q ss_pred hHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccc
Q 041538 54 CREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCE 133 (225)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (225)
.+..+.+........+++.++..+++++.|.++||+ |||+++.++.++.+++.+..+++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~------------------- 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP------------------- 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC-------------------
Confidence 356677888889999999999999999999999996 999999999999999888777766
Q ss_pred cccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 134 SATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
+...+++.|.+.|++.++...+...+++|.++++. |+.+..+ ......++.+++.+.+++.+ +
T Consensus 170 -----~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~---------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~ 232 (521)
T KOG0255|consen 170 -----NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ---------RGLALTL-GGFFFVGGLMLPAGAAYITR--D 232 (521)
T ss_pred -----cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch---------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--h
Confidence 56779999999999999999999999999999966 7887777 66777777888888888876 7
Q ss_pred cchhhhhhh
Q 041538 214 WKVGFGIPA 222 (225)
Q Consensus 214 ~~~~f~~~~ 222 (225)
||+.+++..
T Consensus 233 Wr~~~~~~~ 241 (521)
T KOG0255|consen 233 WRWLFWIIS 241 (521)
T ss_pred HHHHHHHHH
Confidence 998887654
No 159
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.09 E-value=4.6e-09 Score=95.34 Aligned_cols=148 Identities=7% Similarity=-0.007 Sum_probs=102.2
Q ss_pred hhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 041538 44 GFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLA 123 (225)
Q Consensus 44 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 123 (225)
....+.|.+. ++.|++..+..+......+...++.+++|+++||+ |||+.+..+.++.+++.+.+......+
T Consensus 289 ~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~------ 360 (479)
T PRK10077 289 VVLYYAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ------ 360 (479)
T ss_pred HHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC------
Confidence 3344445544 46898888777777778888899999999999998 999999999888888777665443100
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhCcc-cchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH
Q 041538 124 CDYTLRDSCESATGSQLMLLYLAFGLMSLGGGG-IRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV 202 (225)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~ 202 (225)
... ......+.+.+++.+. ..+..+.++.|.+|++. |+++.++.+...+++..+++
T Consensus 361 -------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---------r~~~~g~~~~~~~~g~~~~~ 417 (479)
T PRK10077 361 -------------APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI---------RGKALAIAVAAQWIANYFVS 417 (479)
T ss_pred -------------ccc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH---------HHHHHHHHHHHHHHHHHHHH
Confidence 111 1222233333333332 33667889999999855 89999998888888888876
Q ss_pred Hhhh------heecccCcchhhhhhh
Q 041538 203 TFIV------YIQDNLGWKVGFGIPA 222 (225)
Q Consensus 203 ~l~~------~l~~~~g~~~~f~~~~ 222 (225)
.+.+ ++.++.+|+..|.+.+
T Consensus 418 ~~~p~~~~~~~~~~~~~~~~~~~~~~ 443 (479)
T PRK10077 418 WTFPMMDKNSWLVAHFHNGFSYWIYG 443 (479)
T ss_pred HHhHHHHhccchhhhccCccHHHHHH
Confidence 5555 4446678887776544
No 160
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=2.2e-09 Score=107.41 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=116.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchh-HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKIT-EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
|.++..++..++.....+....++|.|+++.+|++.. +.+++.....++..++.++.|+++||+ ++++.+.++.++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3344444444444555566778889999999999999 999999999999999999999999997 99998888777666
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++.+++.+.. +...+++..++.+++.+...+...+++.+..|++. |+
T Consensus 311 ~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------rg 357 (1146)
T PRK08633 311 LSLFLLPTAP------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE---------LG 357 (1146)
T ss_pred HHHHHHHHhh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc---------hh
Confidence 6665555432 34456666777888888888888899989888866 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
++++.+++..++|..+++.+.+.+.
T Consensus 358 ~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 358 KVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888877776654
No 161
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.08 E-value=4.7e-09 Score=93.17 Aligned_cols=146 Identities=12% Similarity=0.095 Sum_probs=121.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHh
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLT 113 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~ 113 (225)
.-|+.....+.....+.+.+++.++++..|++.+......++.+.++..|++.||+ |+|+.+.++..++++|+.+++=+
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhh
Confidence 33333334456677888999999999999999999999999999999999999998 99999999999999999877643
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
. ......++++++.+.+.|.+......+++++.+.|+++ -+.-.+..+..
T Consensus 99 a---------------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~---------a~~rlnl~q~f 148 (422)
T COG0738 99 A---------------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES---------AAFRLNLAQAF 148 (422)
T ss_pred h---------------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh---------HHHHHHHHHHh
Confidence 3 12356789999999999999999999999999999854 23335566778
Q ss_pred HhhhhhhHHHhhhheec
Q 041538 194 VSASSMVAVTFIVYIQD 210 (225)
Q Consensus 194 ~~ig~~~g~~l~~~l~~ 210 (225)
..+|+++||.+++++..
T Consensus 149 n~lGa~~gp~~g~~lil 165 (422)
T COG0738 149 NGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 89999999999997755
No 162
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.08 E-value=2.4e-10 Score=101.45 Aligned_cols=111 Identities=42% Similarity=0.798 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCC
Q 041538 93 YAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKG 172 (225)
Q Consensus 93 r~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~ 172 (225)
+|++.++.+++++|++++.++...+.. +.+.+...+++++.+.++|.|+..|+..++++|||+++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~---------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL---------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC---------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh---------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 478999999999999998887632220 12334577999999999999999999999999999987
Q ss_pred CCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhcc
Q 041538 173 DGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAAI 224 (225)
Q Consensus 173 ~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~~ 224 (225)
++ +.|.++|.++|++.|+|+.+++.+.++++++.||.++|++.++.
T Consensus 66 ~~------~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~ 111 (372)
T PF00854_consen 66 DD------SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIG 111 (372)
T ss_dssp TT------THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHH
T ss_pred ch------hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHH
Confidence 43 45999999999999999999999999999999999999988764
No 163
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.08 E-value=3.4e-09 Score=98.47 Aligned_cols=166 Identities=15% Similarity=0.089 Sum_probs=123.2
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
..|.+|. ..++.+++......-++-++. ++.-|+...+.+.....+-..+..+++|.++||+ .|||+++.+-++.
T Consensus 11 ~Fr~lw~---a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~ 85 (524)
T PF05977_consen 11 NFRRLWI---AQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLR 85 (524)
T ss_pred hHHHHHH---HHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHH
Confidence 3455555 444444443322222333333 4566788888888888888889999999999998 9999999998877
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.+....+.+..... ..+++.+++..++.+++.+...|+.++++.|+.|+++ .
T Consensus 86 ~~~~~~L~~l~~~~-------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~---------L 137 (524)
T PF05977_consen 86 ALVALLLAVLAFFG-------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED---------L 137 (524)
T ss_pred HHHHHHHHHHHHhC-------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh---------H
Confidence 66555555433111 1246667888888999999999999999999999866 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
..+.++.....|++-.+||.++|.+....|-.+.|.+-+
T Consensus 138 ~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~ina 176 (524)
T PF05977_consen 138 PAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINA 176 (524)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999888778777776543
No 164
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=6.5e-10 Score=97.98 Aligned_cols=116 Identities=17% Similarity=0.054 Sum_probs=99.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchh
Q 041538 60 KITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQ 139 (225)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (225)
+..-++.+-+.+++.-.+.++..|.++||+ |||+++..+++..++...+++.+. +
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~------------------------~ 120 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR------------------------N 120 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH------------------------H
Confidence 344568888999999999999999999998 999999999888888776666655 4
Q ss_pred HHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheec
Q 041538 140 LMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQD 210 (225)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~ 210 (225)
...+.++|++.|+..|-. ..+-++++|.+++++ |+.+++....+..+|.++||.+++++.+
T Consensus 121 F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~---------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY---------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh---------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 455777799999998854 678899999999866 7888999999999999999999999877
No 165
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.07 E-value=1.8e-09 Score=96.70 Aligned_cols=134 Identities=11% Similarity=-0.001 Sum_probs=95.7
Q ss_pred hHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 041538 45 FMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLAC 124 (225)
Q Consensus 45 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 124 (225)
...++|.|+++..| ++.+.+.................+++.||.++.++.+..+.++..++..++....
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 45678888887666 6677777776666655555555556665533767767777666666665555433
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 125 DYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
+...+.+...+.+++.+...|....++.|..|+++ |+++.+.++...++|..+||.+
T Consensus 296 --------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 296 --------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA---------RGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc---------chhhhhHHHHHHHHHHHhcccc
Confidence 22334445556677777777888889999999866 7899999999999999999999
Q ss_pred hhheeccc
Q 041538 205 IVYIQDNL 212 (225)
Q Consensus 205 ~~~l~~~~ 212 (225)
.|++.|+.
T Consensus 353 ~G~l~~~~ 360 (400)
T PRK11646 353 GGWLFDLG 360 (400)
T ss_pred hHHHHHHH
Confidence 99998764
No 166
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.07 E-value=2e-09 Score=93.90 Aligned_cols=140 Identities=9% Similarity=0.066 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+...+..+......+.+..+.|.|+++.+|+++.+++.......+...++.+++|+++||+ ||||.+..+......+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 44444445555556677888999999999999999999988888999999999999999998 99988877766655555
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++.+... ...+.........+..++.|...+...+...+..|+ + +++..
T Consensus 306 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~---------~g~~~ 355 (366)
T TIGR00886 306 FLVVLGLV--------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A---------TGAVS 355 (366)
T ss_pred HHHHhcCC--------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h---------cccHH
Confidence 54444320 001233344445555555565566677777787763 3 67888
Q ss_pred HHHHHHHhhhh
Q 041538 188 SWYYVSVSASS 198 (225)
Q Consensus 188 ~~~~~~~~ig~ 198 (225)
+..+...++|+
T Consensus 356 g~~~~~~~~g~ 366 (366)
T TIGR00886 356 GLVGAIGNLGG 366 (366)
T ss_pred HHHHHhccCCC
Confidence 88777777653
No 167
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=2.2e-09 Score=91.75 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=122.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHH-HHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGF-GCI 101 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~-~~~ 101 (225)
...+.+|.+.++.++-.++.+=+.+.-|.+.++.+|+|+.+++.+.+.......+.+++.|.++||+ ||+-.... +++
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACI 339 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHH
Confidence 4446678888888887777777777788999999999999999999999999999999999999998 98765443 445
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
....++..+.++.- + -+.++.++|+.......+.++.++...|.+.
T Consensus 340 ~tl~~H~~l~Ft~l-----------------------s---Py~~m~~lGLsysllAcslWP~va~~vpE~q-------- 385 (459)
T KOG4686|consen 340 LTLLGHSGLFFTFL-----------------------S---PYTSMTFLGLSYSLLACSLWPCVASLVPEEQ-------- 385 (459)
T ss_pred HHHHHhhhHHhhhc-----------------------c---HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH--------
Confidence 66677777776541 1 3445556666655555556777777777644
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
.+++++..+...|+|-.+-|++++.+.|+-|
T Consensus 386 -LGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 386 -LGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred -hcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 8999999999999999999999999998765
No 168
>PRK09669 putative symporter YagG; Provisional
Probab=99.06 E-value=1.7e-09 Score=97.89 Aligned_cols=162 Identities=10% Similarity=0.049 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+...+..++............+.|.+..++ ++...........+...++.++.++++||+ |+|+.+..+.+...++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 3333334444434333333333333333333 233334445555666777888999999998 99999988876655444
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..+.+.. .++...+++...+.+++.+...+..+++++|..|.++. +.+++..+..+
T Consensus 309 ~~~~~~~----------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~--~~G~r~~g~~~ 364 (444)
T PRK09669 309 ALIFFIP----------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK--RSGRRLDGLVF 364 (444)
T ss_pred HHHHHhC----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh--hcCcCcchHHH
Confidence 3333221 12445566677788999998899999999999884432 12334467788
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
+.+.+...+|.++|+.+.+++.+..||.
T Consensus 365 s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 365 STNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8899999999999999999988888874
No 169
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1e-09 Score=101.10 Aligned_cols=138 Identities=14% Similarity=0.028 Sum_probs=113.7
Q ss_pred HhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccccc
Q 041538 53 LCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSC 132 (225)
Q Consensus 53 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (225)
+.++.|+...+-+.+.+++.+++.++.+++|.+.||+ .-.+.+....+...+-.++.....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------ 132 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------ 132 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 3467888889999999999999999999999999998 866666666555544333333322
Q ss_pred ccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee---
Q 041538 133 ESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ--- 209 (225)
Q Consensus 133 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~--- 209 (225)
+...+++.+++.|+..+..+|+...+++.+|.+++ |+.-+++++...++|+++|..++..+.
T Consensus 133 ------s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e---------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~ 197 (495)
T KOG2533|consen 133 ------SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE---------RGLRMGIWYASASLGNIFGGLIAYGVFKLN 197 (495)
T ss_pred ------hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh---------hhhhHHHHHHhcchhhHHHHHHHHHhhhhc
Confidence 45669999999999999999999999999999966 788899999999999999999998753
Q ss_pred ---cccCcchhhhhhhcc
Q 041538 210 ---DNLGWKVGFGIPAAI 224 (225)
Q Consensus 210 ---~~~g~~~~f~~~~~~ 224 (225)
...||||.|.+.+++
T Consensus 198 ~~~~~~gW~~~FiI~G~i 215 (495)
T KOG2533|consen 198 GSGGLAGWRWLFIIEGVI 215 (495)
T ss_pred CCCCcCCceeehhHHHHH
Confidence 235899999988764
No 170
>PRK09669 putative symporter YagG; Provisional
Probab=99.04 E-value=1.5e-09 Score=98.38 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHH-HHHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAM-IGFGCITCLLGMV 108 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~-~~~~~~~~~i~~~ 108 (225)
+..+.....+..+..+++.|+++++|+++.+.+.+..+..+...+..|+.|+++||. +||||. +..+.+...+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344556666667788999999999999999999999999999999999999999993 388665 4455566666655
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
++...+.. +.......+++...+...+......+..++.+|+.+++++ |++.++
T Consensus 96 l~f~~p~~------------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e--------R~~l~~ 149 (444)
T PRK09669 96 LTFYTPDF------------------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE--------RHSLQS 149 (444)
T ss_pred HHHhCCCC------------------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH--------HHHHHH
Confidence 44433210 0122334455555555655556666788899998765332 788777
Q ss_pred HHHHHHhhhhhhHHHhhhheec-------ccCcchhhhhhh
Q 041538 189 WYYVSVSASSMVAVTFIVYIQD-------NLGWKVGFGIPA 222 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l~~-------~~g~~~~f~~~~ 222 (225)
+.....++|+.+++.+...+.. ..||+..+.+.+
T Consensus 150 ~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 150 WRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 7777777877777654432221 235665555443
No 171
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.04 E-value=5e-09 Score=94.52 Aligned_cols=155 Identities=10% Similarity=-0.030 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccc-hHHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGR-YAMIGFGCITCLLGM 107 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~~~~~~~~~~i~~ 107 (225)
..+.+..++....+..+.++++.|+++++|++..+.+++.....+...+++++.|.++||+ || |+.+.++.+...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 3455567777777777789999999999999999999999999999999999999999997 76 667776666665555
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
....+.. +...+.+.+.+.+++.+...+...++..+...+..+...+. ..|.+.+
T Consensus 84 ~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~-~~~~r~~ 138 (418)
T TIGR00889 84 FFAAQVT------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTD-FPPIRVM 138 (418)
T ss_pred HHHHHhc------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhc-CCCeeee
Confidence 5544432 23445566666777655555544444322221110000000 0022222
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
+++|.++||.+.+.+....+|.
T Consensus 139 ------G~lG~~ig~~l~g~l~~~~~~~ 160 (418)
T TIGR00889 139 ------GTIGFIAAMWAVSLLDIELSNI 160 (418)
T ss_pred ------hhHHHHHHHHHHHHhcccchhH
Confidence 2467888888888774333344
No 172
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.03 E-value=2.8e-09 Score=106.97 Aligned_cols=178 Identities=10% Similarity=-0.043 Sum_probs=124.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++..+.++.+.+++|.|+++.+|.++.+.+++.....++..++.++.|+++||. ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4555555666666666677788999999999999999999999999999999999999999987 777766555554444
Q ss_pred HHHHHHHhhh---cCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhh
Q 041538 106 GMVLLWLTTI---FPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGA 182 (225)
Q Consensus 106 ~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (225)
+.+.+.+... .+..... + ..+.. ...+.+.+++..++.|++.+...+..++++.+..|++.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~-~-----~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--------- 367 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLK-S-----ILVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH--------- 367 (1140)
T ss_pred HHHHHHhccccccccccccc-c-----hhhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc---------
Confidence 4433333200 0000000 0 00000 00233456677778888888888889999999999866
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhheec-ccCcchhhhh
Q 041538 183 LKSYFSWYYVSVSASSMVAVTFIVYIQD-NLGWKVGFGI 220 (225)
Q Consensus 183 r~~~~~~~~~~~~ig~~~g~~l~~~l~~-~~g~~~~f~~ 220 (225)
|+++++..+...+++..+++.+.+.+.+ ..++...|.+
T Consensus 368 ~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 368 RARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 7999999999999999999999998863 3455555443
No 173
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.03 E-value=5.8e-09 Score=93.96 Aligned_cols=159 Identities=10% Similarity=-0.048 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREY-NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
..+...+..++......+..++++.|+++.. +.+...+............++.+++++++||+ ++||.+.+..+...+
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 3444444444444444466788999997532 55555555566666678899999999999997 999998888777777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
...+..+.. +. .......+.+++.+..+|...+...+..+++.+ ..
T Consensus 312 ~~ll~~~~~-----------------------~~--~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~---------~~ 357 (410)
T TIGR00885 312 LCLGSIFAG-----------------------GH--VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK---------YG 357 (410)
T ss_pred HHHHHHHcC-----------------------Ch--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh---------hh
Confidence 666665533 11 134555666677777789999999999887442 11
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheeccc------Ccchhhhhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNL------GWKVGFGIPA 222 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~------g~~~~f~~~~ 222 (225)
...+. ...+|+.+.|.+.|++.|+. +.+..|.+..
T Consensus 358 s~~l~--~~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 358 AAGLV--MAIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred HHHHH--HHHhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 12222 23499999999999999954 4777777654
No 174
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=2e-09 Score=98.47 Aligned_cols=167 Identities=19% Similarity=0.106 Sum_probs=117.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++..++..++.....+....+.+.|.+...+ ++...+.+.....+...++.++.++++||+ |+|+.+.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 555566666666666666666666655554444 555566666666678888899999999998 999999988877766
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+.+.+...... ...+...+++..++.+++.+...+...++++|..|.++- +.+++..+.
T Consensus 309 ~~~~~~~~~~~-------------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~--~tG~R~~G~ 367 (473)
T PRK10429 309 SCGVLLLMGLA-------------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEY--KLGIRCESI 367 (473)
T ss_pred HHHHHHHHhcc-------------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhH--hcCccchhH
Confidence 66555432100 012344556666778888888888889999999775421 123344677
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
.++.+.+...++..+++.+.|++.+..||.
T Consensus 368 ~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 368 AYSVQTMVVKGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888889999999999999999988777764
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.01 E-value=6.4e-09 Score=96.69 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=129.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+...+...++..+........+|.+.++.+|.++...+.+.+...++..++.++.+++.+|+ ++++.+..+.+.+.+
T Consensus 218 ~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~ 296 (524)
T PF05977_consen 218 PPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFAL 296 (524)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHH
Confidence 3333333334444444445566788999999999999999999999999999999999999997 999998888887777
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+...+.+.. +..+.++.+++.|++........+..+-+..|++. |++
T Consensus 297 ~~~~lal~~------------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~---------~GR 343 (524)
T PF05977_consen 297 ALLLLALSP------------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV---------RGR 343 (524)
T ss_pred HHHHHhcch------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HhH
Confidence 776666544 44556667777888877777777777777778744 899
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+++.++.....+..+|..+.|.+.++.|-+..+.++++
T Consensus 344 v~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~ 381 (524)
T PF05977_consen 344 VFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGA 381 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99999999999999999999999999998888776654
No 176
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.00 E-value=9.1e-09 Score=91.52 Aligned_cols=154 Identities=11% Similarity=-0.074 Sum_probs=100.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccch---HHHHH-HHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRY---AMIGF-GCI 101 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr---~~~~~-~~~ 101 (225)
|.++...+..++....+|++.+|+|.|+++ .|++.. .+....+... .+.+..++++||. .|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAIL---AGLIGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHH---HHHHHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 556777778888888999999999999975 678764 4444333333 3344468999987 654 33222 222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..+....+.+.. +.........+.+++.....+..+++.+|.+|++.
T Consensus 266 ~~a~~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~-------- 313 (368)
T TIGR00903 266 LIAAFFLALAFEL------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL-------- 313 (368)
T ss_pred HHHHHHHHHHHcc------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh--------
Confidence 2222222222211 11223333444555666666778889999999966
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGI 220 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~ 220 (225)
|+++.++.+..+++++..+|.+.+.+.. |.+..|.+
T Consensus 314 -rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~ 349 (368)
T TIGR00903 314 -HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTF 349 (368)
T ss_pred -cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHH
Confidence 8999999999999999999999987763 44444443
No 177
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.99 E-value=5.4e-09 Score=95.83 Aligned_cols=163 Identities=11% Similarity=0.040 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhcc-----chHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVG-----RYAMIGFGCITC 103 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----rr~~~~~~~~~~ 103 (225)
..+....+..... +.....++.++++++|+|+++.+...+....-..+-++ .|.++||+ + ||+.+.++.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHH
Confidence 3344466667777 77788888999999999999998888888877777544 99999998 6 566666665554
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
. ......+.. ..+......+.+.+.+++.+....+.-++..|..+ +++ +.+
T Consensus 106 ~-~~~~~~l~~---------------------~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~------~~~ 156 (468)
T TIGR00788 106 S-AILYGLLPG---------------------KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP------SAG 156 (468)
T ss_pred H-HHHHHhccc---------------------ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC------CcC
Confidence 2 111122211 01123334446777888888888899999999999 443 124
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+...++.+.+.++|..+|+.++|.+.+..+|+..|++.++
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~ 196 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAA 196 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 4445566667789999999999999998899999987654
No 178
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.98 E-value=4.7e-09 Score=96.03 Aligned_cols=147 Identities=9% Similarity=0.097 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhH----hhccchHH-HHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLAD----SYVGRYAM-IGFGCITCLLGM 107 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Grr~~-~~~~~~~~~i~~ 107 (225)
+..+.....+..+.++++.|+++.+|+++.+.+.+..+.-+...+..|+.|+++| |+ ||||. +..+.+.+.++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 3556667777778899999999999999999999999999999999999999999 65 98554 555666666665
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.+++.....+ .......+.+...+..++......+..++..|+.+..++ |.+.+
T Consensus 92 ~llf~~p~~~------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e--------R~~l~ 145 (473)
T PRK10429 92 FLLFSAHLFE------------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE--------REQLV 145 (473)
T ss_pred HHHHcCCCCC------------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH--------HHHHH
Confidence 5554322000 111233344444556677777777888999998754332 88888
Q ss_pred HHHHHHHhhhhhhHHHhhh
Q 041538 188 SWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~ 206 (225)
++-....++|+.+.+.+..
T Consensus 146 ~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 146 PYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8767777777666555443
No 179
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.97 E-value=3.6e-08 Score=86.62 Aligned_cols=160 Identities=15% Similarity=0.089 Sum_probs=126.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|..|.+.+..-..+..+|.+..|+|.+++ +.|+|..++++..++.........+.+-.+++|.-.+|+.......++.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 34566777777888999999999999999 45999999999999999999999999999999876788888888888888
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
|.+-+.+.. .+. .+...+++|+|.|+..+....++.+-.+..++ -++
T Consensus 287 G~~G~~~~P-----------------------~~~--~~lw~~llG~G~G~~F~laL~li~~rs~~a~~--------Aa~ 333 (395)
T COG2807 287 GLVGLLLAP-----------------------GQL--PILWALLLGLGQGGAFPLALTLILLRSSDAAI--------AAA 333 (395)
T ss_pred HHHHHHHhh-----------------------hhH--HHHHHHHHhCccchHHHHHHHHHHhhcCChHH--------HHH
Confidence 887777654 111 22225889999999998888888877665442 566
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccC-cchhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFG 219 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~ 219 (225)
..++.+..+.+=+..||.+.|++.|.+| |+....
T Consensus 334 LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~ 368 (395)
T COG2807 334 LSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLV 368 (395)
T ss_pred HHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHH
Confidence 6666666666666799999999998774 765544
No 180
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.96 E-value=1.4e-08 Score=90.05 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=59.4
Q ss_pred HhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh
Q 041538 43 TGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT 114 (225)
Q Consensus 43 ~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~ 114 (225)
.....+.|.|+++++|+++.+.+.......+...++.++.|++.||+ |||+.+..+..+..++.+.+.+..
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667888889999999999888888999999999999999998 999999988887777777666543
No 181
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=1.2e-08 Score=91.12 Aligned_cols=160 Identities=16% Similarity=0.215 Sum_probs=127.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+..-.+..++-+=+..++...-..|..+++|++..|.........+...++++++|+++||+ |.|+++..+.+...+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3555555555555555566777777899999999999999999999999999999999999998 999999999887766
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
..+...+.. ...-+.+.-++.|...|..++.+-++.+++.|+++ -++
T Consensus 331 ~~~~~~~~~------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k---------~~~ 377 (438)
T COG2270 331 AALYLIFLE------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK---------EGR 377 (438)
T ss_pred HHHHHHHcc------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc---------ccc
Confidence 655444432 12235555577888899999999999999999966 588
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccC-cchhhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFG 219 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~ 219 (225)
.|++|+.....++.+||.+.+.+.+.+| -|.++.
T Consensus 378 fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 8999999999999999999998877664 444443
No 182
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.1e-08 Score=93.88 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=108.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhcc-------chHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVG-------RYAMIGF 98 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-------rr~~~~~ 98 (225)
+.+|.+.+..++...+++.+..++|.|+++.+|++..+.++...+-.+...+..+++|.++||... +||.+-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 455677889999999999999999999999999999999999999999999999999999999822 1222221
Q ss_pred H-HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccch--hHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCC
Q 041538 99 G-CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGS--QLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGI 175 (225)
Q Consensus 99 ~-~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~ 175 (225)
. ...-.++++.+.+.. . ... ....+.++..+.|+..++.. .-..|.-|+ .
T Consensus 338 i~~~~~ai~l~~l~~~~---~-----------------~~~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~apq-~-- 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTS---D-----------------EHRLLAVILLTIAIGLSGFNISGFY----KNHQDIAPQ-H-- 390 (466)
T ss_pred HHHHHHHHHHHeeeecC---C-----------------CcchHHHHHHHHHHHHcccchhhhH----hhhhhccch-H--
Confidence 1 112222222222221 0 011 11112222222222222221 111222222 2
Q ss_pred CccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc---cCcchhhhhhhcc
Q 041538 176 KSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN---LGWKVGFGIPAAI 224 (225)
Q Consensus 176 ~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~---~g~~~~f~~~~~~ 224 (225)
-+...+..++..++++.++|.+.+.+.++ ..|+..|.+.+++
T Consensus 391 -------a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i 435 (466)
T KOG2532|consen 391 -------AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGI 435 (466)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHH
Confidence 47778888999999999999999988743 2799999987764
No 183
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.94 E-value=2.1e-09 Score=96.84 Aligned_cols=177 Identities=16% Similarity=0.093 Sum_probs=113.8
Q ss_pred CCchHHHHHH---HHHHHHHHHHhhHHHHHHHHhH-------hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccch
Q 041538 24 GIRTLPFIIA---NEAFERMASTGFMPNMILYLCR-------EYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRY 93 (225)
Q Consensus 24 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~yl~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr 93 (225)
+|+....+++ .-+.+.+..+.+....+.+-.- +-|+++...+.+.....++..++|++.||++||+ |||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cch
Confidence 4554443333 3334555555554444433221 1346777888899999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 94 AMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 94 ~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
+++....++.+++.+...+....+. ..+..+.++.-|.++|+|.|+-+|.+..+.+|..-+..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~-----------------~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~ 177 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTS-----------------PLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT 177 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCC-----------------CcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc
Confidence 9999999999998885555431111 11345668888999999999999999888888655533
Q ss_pred CCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheeccc-----------Ccchhhhhhhc
Q 041538 174 GIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNL-----------GWKVGFGIPAA 223 (225)
Q Consensus 174 ~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~-----------g~~~~f~~~~~ 223 (225)
|. +..+-.++.+.+..-.|+.++-++..-..... -||..|.+.++
T Consensus 178 RG-----a~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 178 RG-----AFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred cc-----ceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 21 11122334445555556655555544332211 27877776553
No 184
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.92 E-value=7.4e-08 Score=86.10 Aligned_cols=147 Identities=12% Similarity=-0.012 Sum_probs=105.4
Q ss_pred HHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCC
Q 041538 39 RMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPH 118 (225)
Q Consensus 39 ~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~ 118 (225)
..........++.|+++.+|.++.+.+.......++..++.++.+++.||. ++|+.+..+... .+....+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh----
Confidence 334445556677889999999999999999999999999999999999997 988887776433 22222222211
Q ss_pred CCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhh
Q 041538 119 ARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASS 198 (225)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 198 (225)
+.....+...+.|++.+...+..+..+.+. ++++. .++++++..+...+++.
T Consensus 292 --------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~-~~~~~-------~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 292 --------------------SLLPAYPLLILIGALGGFFVVPMNALLQHR-GHVLV-------GAGHSIAVQNFNENLAM 343 (393)
T ss_pred --------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhh-Ccccc-------cchhHHHHHhHHHHHHH
Confidence 233345566677888887777777777665 33331 16888999999999999
Q ss_pred hhHHHhhhheecccCcchhhhh
Q 041538 199 MVAVTFIVYIQDNLGWKVGFGI 220 (225)
Q Consensus 199 ~~g~~l~~~l~~~~g~~~~f~~ 220 (225)
.++..+.+.+ +..|-+..+.+
T Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~ 364 (393)
T PRK11195 344 LLMLGLYSLL-VKLGVPVVAVI 364 (393)
T ss_pred HHHHHHHHHH-HHcCCCHHHHH
Confidence 9999998866 44565554443
No 185
>PRK11043 putative transporter; Provisional
Probab=98.92 E-value=4.7e-08 Score=86.90 Aligned_cols=145 Identities=10% Similarity=0.061 Sum_probs=99.3
Q ss_pred HHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhc
Q 041538 37 FERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIF 116 (225)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~ 116 (225)
+....++....+.|.|++ +.|+++.+.+.......+...++.++.+++.||+ |+||.+....+...++...+......
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445566677888876 4799999999887777788888999999999997 99987766555554444433332210
Q ss_pred CCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhh
Q 041538 117 PHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSA 196 (225)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~i 196 (225)
. ............+.+++.+...+.......|..|+ + ++++.++++.....
T Consensus 292 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~g~~~g~~~~~~~~ 342 (401)
T PRK11043 292 S-------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A---------TGKAAALQNTLQLG 342 (401)
T ss_pred c-------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c---------ChHHHHHHHHHHHH
Confidence 0 11223344455566777777777776666666653 3 68888888888888
Q ss_pred hhhhHHHhhhheeccc
Q 041538 197 SSMVAVTFIVYIQDNL 212 (225)
Q Consensus 197 g~~~g~~l~~~l~~~~ 212 (225)
++..++.+.+.+.+..
T Consensus 343 ~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 343 LCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHccCCC
Confidence 8888888888887643
No 186
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=2.7e-08 Score=91.21 Aligned_cols=128 Identities=13% Similarity=0.140 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHH
Q 041538 65 TNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLY 144 (225)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (225)
..+++.+.++.+++++.+|+++||+ |||..+.+..++..++.+++.++.. .....+++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~---------------------~~~~e~li 120 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKS---------------------APSFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHH---------------------hhhHHHHH
Confidence 4467889999999999999999998 9999999999998888888887652 23578899
Q ss_pred HHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhh--heecccCcchhhhhhh
Q 041538 145 LAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIV--YIQDNLGWKVGFGIPA 222 (225)
Q Consensus 145 ~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~--~l~~~~g~~~~f~~~~ 222 (225)
++|++.|+..|......+-++.|.-|++- ||........+.++|-.++..++- .+.+...|++.+....
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~---------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNL---------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhh---------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 99999999999999999999999999966 888888889999999999866653 4445557888776654
Q ss_pred c
Q 041538 223 A 223 (225)
Q Consensus 223 ~ 223 (225)
+
T Consensus 192 i 192 (485)
T KOG0569|consen 192 I 192 (485)
T ss_pred H
Confidence 3
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.90 E-value=5.2e-08 Score=85.56 Aligned_cols=149 Identities=10% Similarity=0.020 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
.+...+..++.....+....+.|.++.+++|+++.+.+.+.....+...++.++.|++.||+ ||||.+..+..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 33333444444455556667778888888999999999999999999999999999999998 99999888876544433
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..+...... +.......++..+.+.+.+...+.....+.|..| +. +++..
T Consensus 275 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~g~~~ 324 (377)
T PRK11102 275 IWLVVSALL--------------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM---------AGTAS 324 (377)
T ss_pred HHHHHHHHH--------------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc---------chHHH
Confidence 333222100 0112223333333333334444444455566555 33 56666
Q ss_pred HHHHHH-HhhhhhhHHHhhhh
Q 041538 188 SWYYVS-VSASSMVAVTFIVY 207 (225)
Q Consensus 188 ~~~~~~-~~ig~~~g~~l~~~ 207 (225)
+..+.. ..+|..+++.+.+.
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 665443 45667777666543
No 188
>TIGR00898 2A0119 cation transport protein.
Probab=98.90 E-value=7.6e-09 Score=94.82 Aligned_cols=118 Identities=10% Similarity=0.036 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHH
Q 041538 69 FFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFG 148 (225)
Q Consensus 69 ~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (225)
....+....+.++.+++.||+ |||+.+.++.++..++.+++.+... ...........
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~~ 418 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV----------------------DLYFLRTALAV 418 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC----------------------CchHHHHHHHH
Confidence 344566677888999999998 9999999888877777666655330 11122333344
Q ss_pred HHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhh
Q 041538 149 LMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGI 220 (225)
Q Consensus 149 l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~ 220 (225)
+.+++.+...+..+.+..|.+|++. |+++.++.+....+|++++|.+.+ +. ..++...+.+
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~~---------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~ 479 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVV---------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVL 479 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHH---------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHH
Confidence 4455555566778889999999855 899999999999999999999998 43 3344444443
No 189
>PRK11462 putative transporter; Provisional
Probab=98.89 E-value=2.5e-08 Score=91.16 Aligned_cols=150 Identities=15% Similarity=0.190 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHHHH-HHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAMIG-FGCITCLLGMV 108 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~~~-~~~~~~~i~~~ 108 (225)
...+.....+..+..+++.|+++..|+++...+.+..+.-+...+.-|+.|+++||. +||||..+ ++.+...+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 455566677777788999999999999999999999999999999999999999974 59887655 45566766666
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
+++..+. . +.......+.+...+..++......+..++.+|+.+..++ |++.++
T Consensus 96 llf~~p~--~----------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e--------Rt~l~s 149 (460)
T PRK11462 96 LAYSTPD--L----------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ--------RISLQS 149 (460)
T ss_pred HHHhCCC--C----------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH--------HHHHHH
Confidence 5554321 0 0112233344455556777777777888999998876443 999999
Q ss_pred HHHHHHhhhhhhHHHhhhhe
Q 041538 189 WYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l 208 (225)
+.....++|..+++.+...+
T Consensus 150 ~r~~~~~iG~~~~~~~~~pl 169 (460)
T PRK11462 150 WRFVLATAGGMLSTVLMMPL 169 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 98888898888877775443
No 190
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.4e-08 Score=94.05 Aligned_cols=159 Identities=16% Similarity=0.173 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHhhH---HHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 30 FIIANEAFERMASTGFM---PNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 30 ~~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
.+.+..++.....+++. ..+-..++++++.+..+..|+.++......+..++.+.+.||+ |.|++.+.+.+++.+|
T Consensus 46 vV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 46 VVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHH
Confidence 33344444444333332 2334567889999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHH-HHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLA-FGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
.++..++. +.+.+++. -++.|+|.+..+.....++...|++ .|+.
T Consensus 125 ~~lssF~~------------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k----------kR~l 170 (509)
T KOG2504|consen 125 LLLSSFAT------------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK----------KRAL 170 (509)
T ss_pred HHHHHHHh------------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH----------HHHH
Confidence 99888876 23334444 4668899999887777778777765 2788
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
+.++......+|..+=|.+..++.+..|||..+.+.+.
T Consensus 171 A~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~ 208 (509)
T KOG2504|consen 171 ATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGG 208 (509)
T ss_pred HHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHH
Confidence 88887778888888888888888899999998876553
No 191
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.85 E-value=6.6e-08 Score=85.82 Aligned_cols=164 Identities=10% Similarity=-0.086 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHH--HHHHHHHHHHHHHH-HHHhHhhccchHHHHHHHHHH-H
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVL--FFWSAASNFLPILG-AFLADSYVGRYAMIGFGCITC-L 104 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~-G~laDr~~Grr~~~~~~~~~~-~ 104 (225)
..+....+.+...+..+.+.+|.|+++ .|.|+++.+... ........+..++. ++.+||+ ||||...+...+. .
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHH
Confidence 344556677777777788999999985 599999999863 44455555555555 6689997 9999876554332 2
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+....+.... +. ......+.....+..+..+...+...++..|..++++ ++
T Consensus 82 ~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~---------~~ 132 (390)
T TIGR02718 82 ACLASLALVG--PD------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT---------LA 132 (390)
T ss_pred HHHHHHHcCC--cc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh---------hh
Confidence 1222222111 00 0111122233333434444444555555555444422 56
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
...+....+..+|..+|+...+++.++.||+..|++.++
T Consensus 133 ~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~ 171 (390)
T TIGR02718 133 KGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVAC 171 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 666666677789999999888899999999999987764
No 192
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.84 E-value=3.4e-08 Score=89.98 Aligned_cols=165 Identities=17% Similarity=0.140 Sum_probs=132.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+...++..++...++....+....|.+-.++.++.+.............++.++...+.+|+ |+|+++..+.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4444455567777777777777778888888999999998888888888888899999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++.+.. .++..+.++...+.++|.+...+...++++|..+-++- +.+++.-+.
T Consensus 315 ~~~~~~f~~----------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~--~TG~R~eGi 370 (467)
T COG2211 315 GYLLLYFTP----------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEW--KTGVRREGI 370 (467)
T ss_pred HHHHHHhhc----------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHH--HhCCCchhh
Confidence 999888865 23567788888889999999999999999998774431 133444577
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcc
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
.++.+.+..=+|.+++..+.|++....||.
T Consensus 371 ~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 371 VYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 777888888899999988888887776664
No 193
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.84 E-value=3e-08 Score=90.63 Aligned_cols=159 Identities=15% Similarity=0.110 Sum_probs=120.5
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccc-hH
Q 041538 17 INKNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCR-EYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGR-YA 94 (225)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~ 94 (225)
+.+.++.+||.+++..+..++...-+....+..-+|+++ +.+-+.+..|+++....++..+..+..|+...|. ++ |+
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~ 103 (488)
T KOG2325|consen 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKK 103 (488)
T ss_pred cccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCccc
Confidence 334457899999998888888888776666666688885 5788888999999999999999999999999997 75 77
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCC
Q 041538 95 MIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDG 174 (225)
Q Consensus 95 ~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~ 174 (225)
.+..+++.+++|.++.......|. ....++.++|++.|+|.+. ....-.++++.-..++
T Consensus 104 Pli~s~ii~~~g~llY~~l~~~~~-------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d- 162 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLALAYVPN-------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED- 162 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccc-------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc-
Confidence 888889999999988844332221 2678899999999999885 4667888888766656
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhhhHHHhh
Q 041538 175 IKSKSEGALKSYFSWYYVSVSASSMVAVTFI 205 (225)
Q Consensus 175 ~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~ 205 (225)
|.++++....+..+|..+||.+.
T Consensus 163 --------R~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 163 --------RPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred --------hHHHHHHhhhHHHHHHHHhHHHH
Confidence 55555555444444444444443
No 194
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=5.5e-08 Score=90.18 Aligned_cols=163 Identities=14% Similarity=0.115 Sum_probs=126.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHH--HHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGF--GCITC 103 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~--~~~~~ 103 (225)
|..+...+...+..++++....++|.|.. ..++++.++..+.++..+...++.++.|+++|+. ..++.... +.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45555666777788888888899999998 8899999999999999999999999999999997 64343333 33333
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
.+....+.+.. ....++...+++|+..|......+..+.|..+.++ .
T Consensus 376 gl~~~~~p~~~------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~---------l 422 (509)
T KOG2504|consen 376 GLARLFLPFAT------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK---------L 422 (509)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh---------c
Confidence 33332233222 34556667777888888777766678889888855 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccC-cchhhhhhhc
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLG-WKVGFGIPAA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g-~~~~f~~~~~ 223 (225)
...+++......++..+||.++|++.|..| |...|...++
T Consensus 423 ~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~ 463 (509)
T KOG2504|consen 423 SNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGL 463 (509)
T ss_pred chHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcCh
Confidence 889999999999999999999999999887 8888877654
No 195
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.81 E-value=1.6e-07 Score=83.26 Aligned_cols=143 Identities=10% Similarity=0.067 Sum_probs=96.2
Q ss_pred HHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 041538 42 STGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARP 121 (225)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 121 (225)
........+.|+++.+|+++.+.+........+..++.++.+++.||+ +++... ....+.++...+.... ..
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~~---- 294 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPG-WF---- 294 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHH-Hh----
Confidence 333445567788888999999998888887888888888888999987 733322 2222222222222111 00
Q ss_pred CccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhH
Q 041538 122 LACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVA 201 (225)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 201 (225)
...+...++....+.+++.+...+.......|.+|+ + ++...+..+...++|+.++
T Consensus 295 --------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~---------~g~~~~~~~~~~~lg~~~~ 350 (394)
T PRK11652 295 --------------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L---------AGTAGALLGGLQNIGSGLA 350 (394)
T ss_pred --------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c---------chHHHHHHHHHHHHHHHHH
Confidence 011234456666778888888888888888888773 3 5777788888889999999
Q ss_pred HHhhhheecccCcch
Q 041538 202 VTFIVYIQDNLGWKV 216 (225)
Q Consensus 202 ~~l~~~l~~~~g~~~ 216 (225)
+.+++++.++..+..
T Consensus 351 ~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 351 ALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHHccCCchHHH
Confidence 999998876544443
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.81 E-value=1.4e-08 Score=91.65 Aligned_cols=163 Identities=15% Similarity=0.140 Sum_probs=115.9
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhH----hhccchHHHH-HHHHHHHHHHHH
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLAD----SYVGRYAMIG-FGCITCLLGMVL 109 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Grr~~~~-~~~~~~~i~~~~ 109 (225)
.+...........+++.|+++.+|+++...+.+..+..+...+..|+.|.++| |+ ||||..+ .+.+...++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 34555555566778899999999999999999999999999999999999999 76 9888654 566777777776
Q ss_pred HHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHH
Q 041538 110 LWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSW 189 (225)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~ 189 (225)
+.... |. ..+.......+.+...+..++......+..++..|..+.+++ |.+..++
T Consensus 89 lf~~~--p~--------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~--------R~~l~~~ 144 (428)
T PF13347_consen 89 LFSPP--PA--------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE--------RTRLSSW 144 (428)
T ss_pred hhccc--cc--------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh--------hhhHHHH
Confidence 66541 10 000111233345555666788888888899999999886554 8888888
Q ss_pred HHHHHhhhhhhHHHhhhheeccc-------Ccchhhhhhh
Q 041538 190 YYVSVSASSMVAVTFIVYIQDNL-------GWKVGFGIPA 222 (225)
Q Consensus 190 ~~~~~~ig~~~g~~l~~~l~~~~-------g~~~~f~~~~ 222 (225)
-.....+|..+...+.+.+.+.. +|++...+.+
T Consensus 145 ~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 145 RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 77777777766666665544322 4666555443
No 197
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.79 E-value=3.6e-10 Score=101.92 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHH
Q 041538 63 EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLML 142 (225)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (225)
+..+..+...++..++.+++|+++||+ |||+.+.++.++..++.++..++.. ..+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~ 104 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS---------------------YNNFWM 104 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc---------------------cccccc
Confidence 457788999999999999999999998 9999999999999999887777551 124566
Q ss_pred HHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc---cCcchhhh
Q 041538 143 LYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN---LGWKVGFG 219 (225)
Q Consensus 143 ~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~---~g~~~~f~ 219 (225)
+.+++.+.|++.|+..+..+.++.|..|++. |+....+.+....+|..++..+...+.+. .+||..+.
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~---------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~ 175 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPKH---------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLI 175 (451)
T ss_pred ccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccccccc
Confidence 8999999999999999999999999999866 77777788888888888877766544333 34888876
Q ss_pred hhhc
Q 041538 220 IPAA 223 (225)
Q Consensus 220 ~~~~ 223 (225)
+..+
T Consensus 176 ~~~~ 179 (451)
T PF00083_consen 176 FGAI 179 (451)
T ss_pred cccc
Confidence 6543
No 198
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=9.6e-08 Score=84.39 Aligned_cols=146 Identities=10% Similarity=-0.001 Sum_probs=100.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhc--C-----------------CchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREY--N-----------------MKITEGTNVLFFWSAASNFLPILGAFLA 86 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~-----------------~~~~~~~~~~~~~~~~~~i~~~~~G~la 86 (225)
|..+..+.+.+.+.+.||+..-...-..|.+. | .+..+.-.=+.+.+...+-+.++.+++-
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 34455666888888899988766555544332 1 1111112223455667777899999999
Q ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhh
Q 041538 87 DSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGA 166 (225)
Q Consensus 87 Dr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 166 (225)
||+ |||+++....+++.+..+++..... +.. --.+++.++.....+.. +.+.+-.
T Consensus 406 erl-GRKkTMal~l~~f~iflfll~~c~~-------------------rn~-~tvllf~arafisg~fq----vaYvYtP 460 (528)
T KOG0253|consen 406 ERL-GRKKTMALSLILFGIFLFLLTTCKT-------------------RNA-YTVLLFTARAFISGAFQ----VAYVYTP 460 (528)
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHhcC-------------------cch-hHHHHHHHHHHHhchhe----EEEEecC
Confidence 997 9999999999888877766665331 011 12345556666554433 4566789
Q ss_pred hccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhh
Q 041538 167 DQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFI 205 (225)
Q Consensus 167 ~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~ 205 (225)
|.||+.. |+.+.+.......+|+++.|.++
T Consensus 461 EVyPTav---------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 461 EVYPTAV---------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cccchhh---------hhcchhhhhhHHhhhhhhhhHHH
Confidence 9999944 89999999999999999999998
No 199
>PRK11462 putative transporter; Provisional
Probab=98.74 E-value=2.3e-07 Score=84.88 Aligned_cols=156 Identities=8% Similarity=0.022 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHh
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLT 113 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~ 113 (225)
..++..............|.+-.+|. +...+.+.....+...++.+++++++||+ |+|+.+..+.....+....+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 33344343333333333334433443 33345566777788888999999999998 99888765554433333333222
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
. ..+...+++...+.+++.+...+...++++|..+-++- +.+++.-+..++.+.+.
T Consensus 314 ~----------------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~--~tG~r~~g~~~a~~~f~ 369 (460)
T PRK11462 314 P----------------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW--CNGKRLTGISFAGTLFV 369 (460)
T ss_pred c----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH--hcCCCchHHHHHHHHHH
Confidence 1 11222233444555666666666677888888774321 12333345556777788
Q ss_pred HhhhhhhHHHhhhheecccCcc
Q 041538 194 VSASSMVAVTFIVYIQDNLGWK 215 (225)
Q Consensus 194 ~~ig~~~g~~l~~~l~~~~g~~ 215 (225)
..+|..+|+.+.+++.+..||.
T Consensus 370 ~Klg~alg~~i~g~iL~~~Gy~ 391 (460)
T PRK11462 370 LKLGLAFGGALIGWMLAYGGYD 391 (460)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999887766764
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=6.7e-07 Score=82.13 Aligned_cols=163 Identities=13% Similarity=0.066 Sum_probs=110.4
Q ss_pred CchHHHHHHHHHHHHH-HHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERM-ASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
++.+...+...+...+ +.+.+..+ .+.+.++.|++..++.++.........+.++++.++.||+ |||+.++.+..++
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Y-st~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFY-STSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLM 345 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHH
Confidence 3445555555555555 33443333 3445557799999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHhhhcCCCCCCccccccccccccccchhHH-HHHHHHHHHHHhCcc-cchhhhhhhhhccCCCCCCCccchh
Q 041538 104 LLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLM-LLYLAFGLMSLGGGG-IRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 104 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~-~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
.+..+++.....+.. ....... ..+++..+..+..+. ..|...-+.+|++|++.
T Consensus 346 ~~~~~~~~~~~~l~~----------------~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~-------- 401 (485)
T KOG0569|consen 346 AVALLLMSIALFLSN----------------SFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA-------- 401 (485)
T ss_pred HHHHHHHHHHHHHHH----------------HhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc--------
Confidence 888777776542221 0001111 223334433333222 35778889999999977
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCc
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGW 214 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~ 214 (225)
|..+.++.+....+...+-......+.+..|-
T Consensus 402 -R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~ 433 (485)
T KOG0569|consen 402 -RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP 433 (485)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77777777777766666666666666666553
No 201
>PRK09848 glucuronide transporter; Provisional
Probab=98.70 E-value=2.9e-07 Score=83.43 Aligned_cols=151 Identities=11% Similarity=0.087 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHHH-HHHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAMI-GFGCITCLLGMV 108 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~~-~~~~~~~~i~~~ 108 (225)
...+.....+..+.++++.|+++.+|+++.+.+.+.....+...+..++.|+++||. +||||.. ..+.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 355666777767778888999999999999999999999999999999999999995 3777755 555554544444
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
++..... .. .........+....+.+++.+...++..++..+..++.++ |...++
T Consensus 95 ~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~--------r~~~~~ 149 (448)
T PRK09848 95 LVFWVPT-DW----------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS--------RARLGA 149 (448)
T ss_pred HHHhCcC-CC----------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH--------HHHHHH
Confidence 3322110 00 0111233344445566777777777777777776655332 566554
Q ss_pred HHHH-----HHhhhhhhHHHhhhhe
Q 041538 189 WYYV-----SVSASSMVAVTFIVYI 208 (225)
Q Consensus 189 ~~~~-----~~~ig~~~g~~l~~~l 208 (225)
+-.. ..+++..++|.+.+..
T Consensus 150 ~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 150 ARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4333 2345566677766643
No 202
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.69 E-value=7.6e-07 Score=80.26 Aligned_cols=162 Identities=10% Similarity=0.018 Sum_probs=120.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.+....+..++..........+.+.|+++.-+.+....+...++..+.-...-...+++-.|+ |.|+++.++.+.+++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3344444455555655555677778899976657777777777777777777778899999997 999999999988887
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
=..++..... |. .....+..++..+.|+..+....+...++.+..|++. |++
T Consensus 286 R~~l~a~~~~-~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~---------~at 337 (400)
T PF03825_consen 286 RWLLYAYFSD-PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL---------RAT 337 (400)
T ss_pred HHHHHHHhcC-Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc---------hHH
Confidence 7777776520 00 0112233444567898888888999999999999866 788
Q ss_pred HHHHHHH-HHhhhhhhHHHhhhheecccCcch
Q 041538 186 YFSWYYV-SVSASSMVAVTFIVYIQDNLGWKV 216 (225)
Q Consensus 186 ~~~~~~~-~~~ig~~~g~~l~~~l~~~~g~~~ 216 (225)
+.++++. ...+|..+|..++|++.|+.|-+.
T Consensus 338 ~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 338 AQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 8888766 568999999999999999877543
No 203
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.61 E-value=1.2e-06 Score=77.25 Aligned_cols=153 Identities=17% Similarity=0.137 Sum_probs=122.3
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHh
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLT 113 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~ 113 (225)
+.+=.+-...++ ..+..-+++++|++.+.++.+.++-.+...+..++..+++.|+ |.+|.+..+.++..+|..+=..
T Consensus 20 ia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~- 96 (395)
T COG2807 20 IAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSL- 96 (395)
T ss_pred HHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhc-
Confidence 333344454443 3344567889999999999999999999999999999999998 9999999998888777643322
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
.+...++.+-.+.|.|.+..+...++++-+-||++. +..++.|..+
T Consensus 97 ------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~----------~~mtglYs~s 142 (395)
T COG2807 97 ------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV----------GLMTGLYSTS 142 (395)
T ss_pred ------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch----------hhHHhHHHHH
Confidence 134567888888888888888999999999999744 6677888889
Q ss_pred HhhhhhhHHHhhhheeccc-Ccchhhhhhhc
Q 041538 194 VSASSMVAVTFIVYIQDNL-GWKVGFGIPAA 223 (225)
Q Consensus 194 ~~ig~~~g~~l~~~l~~~~-g~~~~f~~~~~ 223 (225)
.++++++++.++..+.++. ||+..+.+.+.
T Consensus 143 l~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 143 LGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred HHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 9999999999999888887 79988766553
No 204
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.58 E-value=1.7e-06 Score=77.33 Aligned_cols=146 Identities=17% Similarity=0.205 Sum_probs=116.1
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT 114 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~ 114 (225)
.+....+++.=-..+=+|--+.+|++..|++.....+..+..++-.+.|++..|..+++|...+++..++++..++.++.
T Consensus 217 l~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 217 LFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAG 296 (403)
T ss_pred HHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444332333447788899999999999999999999999999999999656999999999999998888777765
Q ss_pred hcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHH
Q 041538 115 IFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSV 194 (225)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~ 194 (225)
...+.+++..+.+++|++.|.......+.+.|+.++++ -+...+.+....
T Consensus 297 ---------------------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~---------aG~~mG~WGaaQ 346 (403)
T PF03209_consen 297 ---------------------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR---------AGLFMGAWGAAQ 346 (403)
T ss_pred ---------------------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc---------hhHHHHHHHHHH
Confidence 12356789999999999999988888888888887755 577788888888
Q ss_pred hhhhhhHHHhhhheec
Q 041538 195 SASSMVAVTFIVYIQD 210 (225)
Q Consensus 195 ~ig~~~g~~l~~~l~~ 210 (225)
.++-.+|-.++|.+.|
T Consensus 347 A~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 347 AIARGLGTFLGGALRD 362 (403)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888887655
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.58 E-value=1.7e-07 Score=84.48 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=60.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
+..+......+...+.+....++++.|++++.|+|.+|.+.+.+.......+.+++.|.++||+ |.||.++....
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~ 81 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIA 81 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHH
Confidence 4566666666666777777899999999999999999999999999999999999999999997 97776555443
No 206
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.55 E-value=8.6e-07 Score=80.92 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=121.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHH-HHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAM-IGFGCI 101 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~-~~~~~~ 101 (225)
|..+--....+.....+..+..+++.|.++.+|+++..++.+..+.-+...+.-|+.|.+.||. +||||. ++.+.+
T Consensus 12 ~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 12 KEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3333334467777778888899999999999999999999999999999999999999999986 587776 455556
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
..++...+++.+... +.+.+....++..++.+++......+..++.+++.+..++
T Consensus 92 p~~i~~~l~F~~p~~------------------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E------- 146 (467)
T COG2211 92 PFAIVAVLLFITPDF------------------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE------- 146 (467)
T ss_pred HHHHHHHHHHcCCCc------------------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-------
Confidence 777777777665411 1234556677777888888888888888999888776543
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
|.+..++-....++|..+...+.+.+
T Consensus 147 -R~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 147 -RASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888877666555444
No 207
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.47 E-value=3.6e-06 Score=75.78 Aligned_cols=162 Identities=14% Similarity=0.031 Sum_probs=99.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
|.++...+..++....++.+..+.|.++++.+|+++.+.++.......+..++..+.+.+.+|. +++|.+........+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4555555555666666677778889999999999999999887777777777777777765554 455554444444444
Q ss_pred HHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHH
Q 041538 106 GMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKS 185 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~ 185 (225)
+..++...... ..++....++...+.++|.+...+......- .+.+.+ +++
T Consensus 297 g~~l~~~~~~~-------------------~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~--------~G~ 347 (413)
T PRK15403 297 GLALLIVGNLL-------------------WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP--------KGT 347 (413)
T ss_pred HHHHHHHHHHH-------------------ccccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC--------CcH
Confidence 54444332100 0112233456777778887777766664332 333222 466
Q ss_pred HHHHHHHHHhhhhhhHHHhhhheecccCcchhh
Q 041538 186 YFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGF 218 (225)
Q Consensus 186 ~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f 218 (225)
..+.++.....+...++...+++.++ +-...|
T Consensus 348 a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 379 (413)
T PRK15403 348 VSASLNMVILMVMAVSVEIGRWLWFN-GGRLPF 379 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHH
Confidence 66666666666677777777877554 334444
No 208
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.46 E-value=1.8e-06 Score=77.02 Aligned_cols=158 Identities=13% Similarity=0.100 Sum_probs=122.0
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (225)
.|.++...+..|+--..=-.+-++++.|+.+..+.++.++....+.+..+.+++.+++-++-.|+ ...|.+.+.++...
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~i 313 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAI 313 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 35555555555555544456678899999998999999999999999999999999999999997 99999988876665
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+.++...++. + .+...+..+.|...+..+|...+...+..|.+.. .+
T Consensus 314 ll~~~~~l~~------------------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts--------~~ 360 (422)
T COG0738 314 LLLLAVALIG------------------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS--------VG 360 (422)
T ss_pred HHHHHHHHhc------------------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc--------cc
Confidence 5555555543 1 3355566778888899999999999999995443 33
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhheecccCcchhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFG 219 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~ 219 (225)
+ ..-.+..+|+++-|.+.|++.|..|-+..+.
T Consensus 361 s---~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 361 S---GLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred c---eeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 3 2334678999999999999999988776654
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.41 E-value=6.7e-06 Score=74.15 Aligned_cols=116 Identities=17% Similarity=0.126 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLL 110 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l 110 (225)
+....++..+.+..+.++++.|+++ .|+|..|.+.+.+...+...+.+++.|+++||...+||.+.+..+...+.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4445666677777788999999996 579999999999999999999999999999998346666666555554444333
Q ss_pred HHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCC
Q 041538 111 WLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEK 171 (225)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~ 171 (225)
.... +...+....++..+......|...++..+...+
T Consensus 86 ~~~~------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 86 AFSS------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD 122 (400)
T ss_pred HHhc------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc
Confidence 3322 233344555566666666667777777666553
No 210
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.39 E-value=4.3e-06 Score=57.98 Aligned_cols=69 Identities=23% Similarity=0.227 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 33 ANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
...++...+...+.++++.|+++ .|+++.|.+.+..+.-....+++++.|+++||+ +|+|.+......+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 34555666677788999999995 899999999999999999999999999999998 9999887765543
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.39 E-value=7e-06 Score=74.07 Aligned_cols=166 Identities=10% Similarity=0.074 Sum_probs=122.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcC---CchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYN---MKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
.|..|...+........|+..-.-.+.|.+..++ .+....+.+.+...+.-.+.-.+..++-+|+ |.|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 4566665555555555555554456777775443 3445567777888888888888999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
..++=.....+++ ++..+.....+.++-.+..-....-++++.+|++-
T Consensus 298 i~~iRi~~~~~~~------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl-------- 345 (412)
T PF01306_consen 298 IMAIRIIGSGFAT------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL-------- 345 (412)
T ss_dssp HHHHHHHHHHT--------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG--------
T ss_pred HHHHHHHHHhhhc------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH--------
Confidence 8877766666654 45667888888888888888888899999999833
Q ss_pred hHHHHHHHH-HHHHhhhhhhHHHhhhheecccCcchhhhhhhcc
Q 041538 182 ALKSYFSWY-YVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAAI 224 (225)
Q Consensus 182 ~r~~~~~~~-~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~~ 224 (225)
.++...+. +++..+|..+.+.++|++.|+.|++..|++.+.+
T Consensus 346 -sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~i 388 (412)
T PF01306_consen 346 -SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLI 388 (412)
T ss_dssp -HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHH
Confidence 56666663 6788999999999999999999999888766543
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.38 E-value=2e-05 Score=64.65 Aligned_cols=143 Identities=21% Similarity=0.262 Sum_probs=99.5
Q ss_pred HHHHHHHhHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 041538 47 PNMILYLCREYNMKI--TEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLAC 124 (225)
Q Consensus 47 ~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 124 (225)
...+.+.. +.+.+. .+.++..........++.++.|.++||+ |||+.+..+.....++.....+...
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 33444443 445454 5788888888888899889999999998 9998888777664555444444330
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH-HHhhhhhhHHH
Q 041538 125 DYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV-SVSASSMVAVT 203 (225)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~~g~~ 203 (225)
.....+...+...+++.+...+...+++.|.+|+ . +.|+...+.... ...++..++|.
T Consensus 92 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 92 -------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-------TERGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred -------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2355677777778888888889999999999887 2 116777777666 57777778876
Q ss_pred hhhheecc--cCcchhhhhh
Q 041538 204 FIVYIQDN--LGWKVGFGIP 221 (225)
Q Consensus 204 l~~~l~~~--~g~~~~f~~~ 221 (225)
+.+.+... .+|+..|...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 151 LAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred HHHHHHHHHhcchHHHHHHH
Confidence 66655443 4677755543
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.36 E-value=7.7e-06 Score=75.19 Aligned_cols=166 Identities=8% Similarity=0.033 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhcCCchhH----HHHHHHHHHHHHHHHHHHHHH----HhHhhccchHHH--HHHHH
Q 041538 32 IANEAFERMASTGFMPNMILYLCREYNMKITE----GTNVLFFWSAASNFLPILGAF----LADSYVGRYAMI--GFGCI 101 (225)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~G~----laDr~~Grr~~~--~~~~~ 101 (225)
.+...+....+....+.++.|.+++.+.+... .++..++..+...+.+++..+ +.||-.+.+... .++.+
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~ 357 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGML 357 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 33444455566666777888887765544322 556666666677776666554 444411233333 66777
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
+..++...+.+...... .....++..+....++.++|.....|...+++.+..|++.
T Consensus 358 l~~~~~~~~~~~~~~~~---------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~-------- 414 (475)
T TIGR00924 358 FCGASFLTFAASIWFAD---------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL-------- 414 (475)
T ss_pred HHHHHHHHHHHHHhhcC---------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH--------
Confidence 77777766665321100 0012356778889999999999999999999999999855
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
|++..+.++....+|..+++.+.....+..+|...|...
T Consensus 415 -~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 453 (475)
T TIGR00924 415 -MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKI 453 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHH
Confidence 899999999999999999999988776666676655443
No 214
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.34 E-value=2.1e-05 Score=69.39 Aligned_cols=139 Identities=18% Similarity=0.109 Sum_probs=96.3
Q ss_pred hHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccc
Q 041538 54 CREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCE 133 (225)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (225)
.+++|+++.|...+.........+...+.|.++||+ ||||..+..++++.+.++..-.
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~--------------------- 118 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS--------------------- 118 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc---------------------
Confidence 357899999999999999999999999999999998 9999999999998877753221
Q ss_pred cccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHH-HHHhhhhhhHHHhhhheeccc
Q 041538 134 SATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYY-VSVSASSMVAVTFIVYIQDNL 212 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~~g~~l~~~l~~~~ 212 (225)
.+...+++++++.|++......+.=+.+.....+++- ++ +-.+..++... +.+.+-++.+..++.++.+..
T Consensus 119 ----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~--~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~ 190 (354)
T PF05631_consen 119 ----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGF--PQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWF 190 (354)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--Ch--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh
Confidence 2456799999999998877665555544433333221 11 22455555444 334455556666666776665
Q ss_pred Cc--chhhhhhh
Q 041538 213 GW--KVGFGIPA 222 (225)
Q Consensus 213 g~--~~~f~~~~ 222 (225)
|. ..+|..+.
T Consensus 191 ~~g~vaPF~~a~ 202 (354)
T PF05631_consen 191 GFGPVAPFDAAI 202 (354)
T ss_pred CCCCcchHHHHH
Confidence 44 56665543
No 215
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.18 E-value=2.6e-05 Score=65.95 Aligned_cols=111 Identities=18% Similarity=0.193 Sum_probs=78.9
Q ss_pred HHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 041538 41 ASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHAR 120 (225)
Q Consensus 41 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~ 120 (225)
..|.+..+. ..+++.+|+|.+|...+.+...++..++ ++.|.+.|++ |++.++.++.+...+|..++++.-.-..
T Consensus 17 t~Y~Fs~yS-~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i-- 91 (250)
T PF06813_consen 17 TTYTFSAYS-PQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI-- 91 (250)
T ss_pred cccchhhhh-HHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 345554444 4578899999999999999999998875 8889999998 9999999999999999998888641100
Q ss_pred CCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCC
Q 041538 121 PLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEK 171 (225)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~ 171 (225)
...+.+.+.+...+.+.+.+...........+.||.
T Consensus 92 ---------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 92 ---------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred ---------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 012344455555555555444444444445588986
No 216
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.16 E-value=1.4e-05 Score=73.88 Aligned_cols=162 Identities=17% Similarity=0.101 Sum_probs=102.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHHHHHHHH-
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAMIGFGCI- 101 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~~~~~~~- 101 (225)
+.+|...+..++.....|++..|+|.|+++..|++..++..+.....++..++.+++|+++||. ..+|-.+.....
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3456667788888889999999999999997789999999999999999999999999999993 144444443333
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
...++.+.+.... .......+.+....+.....++...-.++....+.+
T Consensus 353 ~~~~g~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k------- 401 (495)
T KOG2533|consen 353 YAIIGAISLLAAA------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK------- 401 (495)
T ss_pred HHHHHHHHHHhhc------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-------
Confidence 3334433333322 112223322333333333334444445555544443
Q ss_pred hHHHHHHHHHHHH-hhhhhhHHHhhhheecccCcchhhh
Q 041538 182 ALKSYFSWYYVSV-SASSMVAVTFIVYIQDNLGWKVGFG 219 (225)
Q Consensus 182 ~r~~~~~~~~~~~-~ig~~~g~~l~~~l~~~~g~~~~f~ 219 (225)
+.+..+.+..+. +.+.+.+++..+.....++|...|.
T Consensus 402 -~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~ 439 (495)
T KOG2533|consen 402 -ALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFY 439 (495)
T ss_pred -hHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHH
Confidence 444445544444 4444555555666666678888773
No 217
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.12 E-value=2.9e-05 Score=70.73 Aligned_cols=147 Identities=17% Similarity=0.123 Sum_probs=105.0
Q ss_pred HHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh--cc-chHH-HHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 041538 48 NMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY--VG-RYAM-IGFGCITCLLGMVLLWLTTIFPHARPLA 123 (225)
Q Consensus 48 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~--~G-rr~~-~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 123 (225)
-...|+++++|+++.+...+......-..+ -++.|.++|.+ .| |||. +.++.++.+++...+.....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~-------- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA-------- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc--------
Confidence 344678999999999988776666554444 68889999998 45 3444 45566666555555554331
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHH
Q 041538 124 CDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVT 203 (225)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~ 203 (225)
...+.....+.+.+..+|........-++..|....+.. . |+...++.+...++|++++..
T Consensus 82 ------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~------~-~g~lqS~~~~~~~~G~lv~~~ 142 (433)
T PF03092_consen 82 ------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE------S-RGDLQSFVWGVRSVGSLVGSL 142 (433)
T ss_pred ------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc------h-hHHHHHHHHHHHHHHHHHHHH
Confidence 112333455566677788888888888888888765442 2 788888888999999999999
Q ss_pred hhhheecccCcchhhhhhh
Q 041538 204 FIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 204 l~~~l~~~~g~~~~f~~~~ 222 (225)
+.|.+.+..+++..|.+.+
T Consensus 143 l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred hhhhhhhcCCCeEEehHHH
Confidence 9999999889988887654
No 218
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.09 E-value=4.5e-06 Score=76.63 Aligned_cols=137 Identities=10% Similarity=-0.105 Sum_probs=103.3
Q ss_pred HHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCcccccccc
Q 041538 52 YLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT-IFPHARPLACDYTLRD 130 (225)
Q Consensus 52 yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~-~~~~~~~~~~~~~~~~ 130 (225)
+.++.+|+++.+.+.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.....+.. +.+...
T Consensus 278 ~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~---------- 346 (468)
T TIGR00788 278 ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF---------- 346 (468)
T ss_pred EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc----------
Confidence 33457899999999999999999999999999999997 999999999888877665443211 111000
Q ss_pred ccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheec
Q 041538 131 SCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQD 210 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~ 210 (225)
............++.+++.+....+...++.+..|++. +++.++++....++|..+++.+++++.+
T Consensus 347 -----gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~---------egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 347 -----GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC---------ESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred -----CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc---------eehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00112234444566667767767778899999999866 6899999999999999999999999988
Q ss_pred ccC
Q 041538 211 NLG 213 (225)
Q Consensus 211 ~~g 213 (225)
+.|
T Consensus 413 ~~g 415 (468)
T TIGR00788 413 TIG 415 (468)
T ss_pred HcC
Confidence 777
No 219
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.09 E-value=3.1e-05 Score=68.85 Aligned_cols=141 Identities=11% Similarity=0.033 Sum_probs=102.7
Q ss_pred hHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 041538 45 FMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLAC 124 (225)
Q Consensus 45 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 124 (225)
....+.+-++..-+.+..+...+......+..+++...|.++|++ |||+...+..+.-.+.-++-..
T Consensus 96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~------------ 162 (528)
T KOG0253|consen 96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGA------------ 162 (528)
T ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcC------------
Confidence 344444556667788888899999999999999999999999998 9999888775544333332222
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 125 DYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
+.+...+++.+.+.++|.|+ .|...++-.|..|...| ..-.... +...+|......+
T Consensus 163 ------------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r---------~~~~V~~-~~waig~v~ea~l 219 (528)
T KOG0253|consen 163 ------------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHR---------WLLTVMS-FFWAIGQVFEALL 219 (528)
T ss_pred ------------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCC---------CcchhHH-HHHHHHHHHHHHH
Confidence 22456688889999999998 78899999999998663 3323233 5566777777666
Q ss_pred hhheecccCcchhhhhh
Q 041538 205 IVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 205 ~~~l~~~~g~~~~f~~~ 221 (225)
.=.+..++||+|-....
T Consensus 220 aw~vm~~~gwr~~l~~~ 236 (528)
T KOG0253|consen 220 AWGVMSNFGWRYLLFTS 236 (528)
T ss_pred HHHHHHhhhHHHHHHHH
Confidence 66666778998866544
No 220
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.00 E-value=0.00019 Score=68.49 Aligned_cols=82 Identities=15% Similarity=0.259 Sum_probs=65.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHH-HHHHHHHHHHHHhHhhcc--chHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSA-ASNFLPILGAFLADSYVG--RYAMIGFGCIT 102 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~G--rr~~~~~~~~~ 102 (225)
|.++...+..++....++++.+++|.|+++.+|+++.+++.+.....+ ...++.+++|++.||+ + .|+.+.++.++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 445566677888888899999999999999999999999998877665 5678999999999997 6 45666666665
Q ss_pred HHHHHH
Q 041538 103 CLLGMV 108 (225)
Q Consensus 103 ~~i~~~ 108 (225)
.+++..
T Consensus 409 ~~~~~~ 414 (633)
T TIGR00805 409 STLSYL 414 (633)
T ss_pred HHHHHH
Confidence 555543
No 221
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.00 E-value=9.7e-07 Score=82.48 Aligned_cols=156 Identities=15% Similarity=0.266 Sum_probs=2.8
Q ss_pred HHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 041538 40 MASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHA 119 (225)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~ 119 (225)
...++......+-+++.++++.++++++.+.+.++..+..++..+.++|. -|-|.+..+.++..+|.+++.+ |++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l----Phf 90 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL----PHF 90 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc----cHh
Confidence 44555556666779999999999999999999999999999999999997 8889999999999899887775 334
Q ss_pred CCCccccc-----------ccccc---------------cc--cc--chhHHHHHHHHHHHHHhCcccchhhhhhhhhcc
Q 041538 120 RPLACDYT-----------LRDSC---------------ES--AT--GSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQL 169 (225)
Q Consensus 120 ~~~~~~~~-----------~~~~~---------------~~--~~--~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 169 (225)
..+.|++. ..+.| .. .. ..-..+++++.++.|+|....++...+++=|..
T Consensus 91 ~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 91 LSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV 170 (539)
T ss_dssp -------------------------------------------------------------SSS----------------
T ss_pred hcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc
Confidence 44333211 01111 11 11 112456888888999999888888888888887
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 170 EKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 170 p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
++++ -....+..+....+|.++|-.+++...
T Consensus 171 ~~~~---------splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 171 SKKN---------SPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ----------------------------------------
T ss_pred cccc---------CccchhhhhHHhhccHHHHHHHHHHHH
Confidence 7755 567778888888999988888887654
No 222
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=2.6e-08 Score=89.79 Aligned_cols=158 Identities=13% Similarity=0.139 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
.+..............+....+...++.+..+.++. ........+...++.+++.++.||+ |||+.+..+..+.+++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 333334444444333333334444445556676666 2333444456667778888999997 9999999988887777
Q ss_pred HHHHH-HhhhcCCCCCCccccccccccccccc-hhHHHHHHHHHHHHHhCc-ccchhhhhhhhhccCCCCCCCccchhhH
Q 041538 107 MVLLW-LTTIFPHARPLACDYTLRDSCESATG-SQLMLLYLAFGLMSLGGG-GIRSSSLAFGADQLEKGDGIKSKSEGAL 183 (225)
Q Consensus 107 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~~~~p~~~~~~~~~~~~r 183 (225)
...+. .....+. .. ...........+..+..+ +..+....+.+|.||++. |
T Consensus 330 ~~~~~~~~~~~~~-----------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~---------R 383 (451)
T PF00083_consen 330 SLILGIIFFLGVS-----------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV---------R 383 (451)
T ss_pred ccccccccccccc-----------------cccccccccceeeeeccccccccccccccccccccccccc---------c
Confidence 76664 1110000 00 001111122222222222 234556688899999966 7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 184 KSYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 184 ~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
+++.++.+....+++.+++.+.+.+.+..+
T Consensus 384 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 384 STGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred cccccccccccccccccccccccccccccc
Confidence 888999888889999999999988877766
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.95 E-value=7.5e-06 Score=73.06 Aligned_cols=168 Identities=14% Similarity=0.031 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGM 107 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~ 107 (225)
++...+.....+...-..-+.++.+..+.+..+.-+.+.+.....+.+.+++.+.|.++||+ +..|.+....-+..+|.
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~ 350 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGV 350 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHH
Confidence 33333333333333334567777888888885555888888888999999999999999998 96665555444444443
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
..... |. | ++...+++-....+++.+...++.......+.+.+.. .+-..+++++
T Consensus 351 ~~~~i----P~-----~-------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~---s~~~vYGsVy 405 (464)
T KOG3764|consen 351 SSGPI----PF-----A-------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHV---SGFNVYGSVY 405 (464)
T ss_pred Hhchh----Hh-----h-------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhc---cccceeeeHH
Confidence 22221 11 1 1233344444455555555555555555555554321 1112589999
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccCcchhhhhh
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIP 221 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~ 221 (225)
++...+..+|..+||.++|.+.+..|+.|.-.+.
T Consensus 406 aIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 406 AIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred HHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 9999999999999999999999999987765443
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.94 E-value=0.00024 Score=65.72 Aligned_cols=147 Identities=12% Similarity=0.102 Sum_probs=98.3
Q ss_pred HHHHHHHhhHHHHHHHHhHhcCCchh----HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHH-------HHHHHHHHHH
Q 041538 37 FERMASTGFMPNMILYLCREYNMKIT----EGTNVLFFWSAASNFLPILGAFLADSYVGRYAM-------IGFGCITCLL 105 (225)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-------~~~~~~~~~i 105 (225)
.....+......++.|+++..+.+.. ...+..++..+...+..++.|++.||+ |||+. +.++.++..+
T Consensus 280 ~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~ 358 (489)
T PRK10207 280 VFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSL 358 (489)
T ss_pred HHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHH
Confidence 34444555557778888754333211 123344444556667788889999998 98873 6667677666
Q ss_pred HHHHHHHhhh-cCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 106 GMVLLWLTTI-FPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 106 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
+...+..... ... .....+...+.....+.++|.+...+....++.+..|++. ++
T Consensus 359 ~~~~~~~~~~~~~~---------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~---------~g 414 (489)
T PRK10207 359 GFLTAAAAGMWFAD---------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL---------MG 414 (489)
T ss_pred HHHHHHHHHHhhcC---------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH---------HH
Confidence 6654432210 000 0011234556677888999999999999999999999855 78
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 185 SYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
..++.++...++|+.+|..+..+.
T Consensus 415 ~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 415 FILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999988899998888777544
No 225
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.89 E-value=0.00022 Score=67.28 Aligned_cols=153 Identities=10% Similarity=-0.064 Sum_probs=105.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchh---HHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHH-HH
Q 041538 24 GIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKIT---EGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIG-FG 99 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~-~~ 99 (225)
++|.+...+++.++....+|.+..+.|......++-|+. +.++.......+..++..+.|.+.-++ +|-|..+ ++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~ 386 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFG 386 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHH
Confidence 346676667788888888898888999888888776664 567777788888888889999999886 8877654 55
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.+++.++...|+... ..+....+...++.+++.|........ +.+..-+++.
T Consensus 387 ~~~~ta~~Gama~~~----------------------~~n~~~~i~~~~l~g~giG~~~~~~~~-~~ql~~p~~~----- 438 (599)
T PF06609_consen 387 SVLMTAFCGAMAAVR----------------------PDNKNAAIAFLVLAGFGIGGILVPAIV-IAQLIVPDED----- 438 (599)
T ss_pred HHHHHHHHHHHHHcc----------------------CCCcchHHHHHHHHHHhHHHHHHHHHH-eeEeeeCchH-----
Confidence 556666656555443 112223445566677777765433333 3344333332
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 180 EGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
.+..+++.-....+|+.+|..+..-+
T Consensus 439 ---ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 439 ---IGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred ---HHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 88999998889999998888876544
No 226
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00036 Score=64.62 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=61.8
Q ss_pred CCchHHHHHHHHHHHHH-HHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 24 GIRTLPFIIANEAFERM-ASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
.+|.+.+.+....+... ++..+..+.+..++ ..+.+.+. ........+...+++.++.++.||+ |||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~-~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK-SAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHH-hcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 44555555555555444 55555666666655 44555433 5555666777788888889999998 999999999999
Q ss_pred HHHHHHHHHHhh
Q 041538 103 CLLGMVLLWLTT 114 (225)
Q Consensus 103 ~~i~~~~l~~~~ 114 (225)
..++.+++....
T Consensus 369 m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 369 MSICLVILAVVG 380 (513)
T ss_pred HHHHHHHHHHHH
Confidence 999988888754
No 227
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.81 E-value=0.00055 Score=63.39 Aligned_cols=145 Identities=15% Similarity=0.101 Sum_probs=94.8
Q ss_pred HHHHHHHhhHHHHHHHHhH--hcCCchh------HHHHHHHHHHHHHHHHHHHH----HHHhHhhccchHHHHHHHHHHH
Q 041538 37 FERMASTGFMPNMILYLCR--EYNMKIT------EGTNVLFFWSAASNFLPILG----AFLADSYVGRYAMIGFGCITCL 104 (225)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~--~~~~~~~------~~~~~~~~~~~~~~i~~~~~----G~laDr~~Grr~~~~~~~~~~~ 104 (225)
.....++....-++.++.. ..+.+.. ...++.++..+...+..++. +++.||+ +.++.+.++.++..
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 4444555555555555442 1122211 14555556666666666666 4555554 56677888888888
Q ss_pred HHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHH
Q 041538 105 LGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALK 184 (225)
Q Consensus 105 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~ 184 (225)
++...+........ . ....+...+.....+.++|.....|...+++.+..|++. |+
T Consensus 362 l~f~~l~~~~~~~~--------------~-~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~---------rg 417 (500)
T PRK09584 362 GAFLVLPLGAKFAN--------------D-AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL---------MG 417 (500)
T ss_pred HHHHHHHHHHHhcC--------------C-CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH---------HH
Confidence 88887776542111 0 011234468888899999999999999999999999855 89
Q ss_pred HHHHHHHHHHhhhhhhHHHhhh
Q 041538 185 SYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 185 ~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
+.++.++....+|+.++..+..
T Consensus 418 ~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 418 FIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888777777777666654
No 228
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.80 E-value=5.1e-05 Score=72.59 Aligned_cols=170 Identities=16% Similarity=0.274 Sum_probs=121.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLL 105 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i 105 (225)
+.+..+.....+....+.+......+-+++.++++.++++++...+.++..+...+-.+.+-|. -|-|.+..+.++..+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4344444444444444447777778889999999999999999999999999999999999997 899999999999999
Q ss_pred HHHHHHHhhhcCCCCCCccccc-----------------------------cccccc---cccchhHHHHHHHHHHHHHh
Q 041538 106 GMVLLWLTTIFPHARPLACDYT-----------------------------LRDSCE---SATGSQLMLLYLAFGLMSLG 153 (225)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~-----------------------------~~~~~~---~~~~~~~~~~~~~~~l~g~g 153 (225)
+.+++++- ++....|+|. ..+.+. .++...+.+++++.++.|+|
T Consensus 175 gsll~alP----Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG 250 (735)
T KOG3626|consen 175 GSLLFALP----HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIG 250 (735)
T ss_pred HHHHHhCh----HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcC
Confidence 98887753 2333333111 001111 11112345788888899999
Q ss_pred CcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 154 GGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 154 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
....++...+++=|...+.+ -.-..++.++...+|.++|-++++++.
T Consensus 251 ~Tpi~tlGisYiDDnvk~~~---------SplYlgi~~~~~~lGPaiGfllgS~~l 297 (735)
T KOG3626|consen 251 ATPIFTLGISYIDDNVKKKN---------SPLYLGILYSMAILGPAIGFLLGSFCL 297 (735)
T ss_pred CCCCccCCCccccccccccC---------CcHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 88887777777755544433 567788888889999999988888764
No 229
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.74 E-value=0.00063 Score=61.76 Aligned_cols=131 Identities=9% Similarity=0.047 Sum_probs=91.1
Q ss_pred HHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccc
Q 041538 51 LYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRD 130 (225)
Q Consensus 51 ~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (225)
.|.++-++ +...+.|...++........+.+-|+.||+ |-|.+.+++..+-.+|..+=..+. .|.+
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v----------- 134 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFV----------- 134 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccc-----------
Confidence 56666677 777888999999999999999999999998 999999999999988887666654 2211
Q ss_pred ccccccchhH--HHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 131 SCESATGSQL--MLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 131 ~~~~~~~~~~--~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
++.. .+...+..+.+..+......-.-+..-+||+++ |+++...-.++..+|.++|-++.+.+
T Consensus 135 ------~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q---------ra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 135 ------PPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ---------RAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred ------cccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch---------hhhhhhHHHhcchHHHHHHhhcccee
Confidence 1122 245556666666555444333445556799866 67777766666666666665555555
Q ss_pred ec
Q 041538 209 QD 210 (225)
Q Consensus 209 ~~ 210 (225)
..
T Consensus 200 V~ 201 (480)
T KOG2563|consen 200 VP 201 (480)
T ss_pred cC
Confidence 43
No 230
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.65 E-value=0.00055 Score=62.94 Aligned_cols=116 Identities=22% Similarity=0.181 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHH
Q 041538 71 WSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLM 150 (225)
Q Consensus 71 ~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 150 (225)
......+.++..|.++||+ |||..+......+.+..+.+.+.. .+ +++ ..-.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~-------------------------~~-~~~-~~~l 122 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQG-------------------------YW-FFL-LLGL 122 (463)
T ss_pred hHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHH-------------------------HH-Hhh-hccc
Confidence 3567788899999999998 999999998888877776666532 11 221 1111
Q ss_pred HHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhhhhc
Q 041538 151 SLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGIPAA 223 (225)
Q Consensus 151 g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~~~~ 223 (225)
.-+.+.......++++|....++ |....++.+.....+..++|.+.+.+.+..|....|.++++
T Consensus 123 ~g~~~~~~s~~~a~vadis~~~~---------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~ 186 (463)
T KOG2816|consen 123 SGGFSAIFSVGFAYVADISSEEE---------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAA 186 (463)
T ss_pred ccchhhhhhhhhhheeeccchhH---------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHH
Confidence 11233455667778888777654 89989998888889999999999999888888777776654
No 231
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.64 E-value=1.7e-06 Score=74.35 Aligned_cols=136 Identities=15% Similarity=0.183 Sum_probs=103.8
Q ss_pred HHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 041538 46 MPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACD 125 (225)
Q Consensus 46 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 125 (225)
-.-+..+...+.+...++.+.+.++++.=+.+.++++|++.||.+|-|..-.+-+.+..+|-++++.-.
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg----------- 131 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG----------- 131 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch-----------
Confidence 344455666667777778888899999999999999999999998877665555566667777666533
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhh
Q 041538 126 YTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFI 205 (225)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~ 205 (225)
.....+++..+++++|+|.-......+.+...+|.-.+ ..-+++++-....+|+.+--.++
T Consensus 132 ----------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE---------Ln~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 132 ----------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE---------LNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred ----------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc---------ccchhhHHHHHHHhhceeeeeec
Confidence 12356789999999999977677778888888887644 78889998888888887766677
Q ss_pred hheecc
Q 041538 206 VYIQDN 211 (225)
Q Consensus 206 ~~l~~~ 211 (225)
+++.++
T Consensus 193 ~~ly~~ 198 (459)
T KOG4686|consen 193 PFLYDT 198 (459)
T ss_pred HHHHHH
Confidence 777654
No 232
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.63 E-value=7.6e-05 Score=67.69 Aligned_cols=167 Identities=12% Similarity=0.067 Sum_probs=109.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh---ccchHHHHHHHH-
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSY---VGRYAMIGFGCI- 101 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~~~~~~~- 101 (225)
+.++....+.+...+.+-.=.+++++|++ .+|.+..-++.+-...-+...+.+++-|..+||- +||||.++....
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 45555555666666665555778889988 5688888777776777777888899999999986 699998776655
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchh
Q 041538 102 TCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEG 181 (225)
Q Consensus 102 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (225)
...++..++.++..+.... |++.-.+ ...-...+++++..+.=+.....+...-++++|+..+.++
T Consensus 111 ~i~~~l~Lig~aaDig~~l---gd~~~~~----~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~------- 176 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL---GDNERKP----VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK------- 176 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh---cCCcccc----cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-------
Confidence 5555665555544222211 1111000 0011334556666666666667778888999999887664
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 182 ALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 182 ~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
..++.+++.+...+|+.+|..+.++.
T Consensus 177 -~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 177 -KTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred -hhccchhHHHHHHhcceeeeeccccc
Confidence 22277777888888888877666643
No 233
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.53 E-value=0.0026 Score=58.74 Aligned_cols=119 Identities=14% Similarity=0.072 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHH-HHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHH
Q 041538 65 TNVLFFWSAASNFLPILGAFLADSYVGRYAMIG-FGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLL 143 (225)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (225)
+...++..+...+..|+.|-++|+- |+||.++ +...++++....+.+.. ++.....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~----------------------~~~~~~~ 129 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS----------------------PGQWWLA 129 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC----------------------cchHHHH
Confidence 4567788888888999999999997 7777554 44456666666666643 2233334
Q ss_pred HHHHHHHHHhCcccchhhhhhhhhccCCCCCCCcc-----------------chhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 144 YLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSK-----------------SEGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 144 ~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~-----------------~~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
.+..++..++.+......++++.|+.+++++.++. ....|++.++.-+..+++|+.+.-.+.-
T Consensus 130 ~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l 209 (477)
T PF11700_consen 130 LVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL 209 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 44444455666667788899999998876641100 0111267777777777888876655543
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.39 E-value=0.0081 Score=47.24 Aligned_cols=112 Identities=10% Similarity=0.130 Sum_probs=76.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchh
Q 041538 60 KITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQ 139 (225)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (225)
++.....-..+......+..++.+.+-+++ |.|+.+.++.+.+.+-....... +
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~~-------------------------~ 88 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFYP-------------------------N 88 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhh-------------------------h
Confidence 333444445555566677778888899997 99999999988776443322211 3
Q ss_pred HHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 140 LMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
...++.+-.+.|++.+..+.....++.+.-++++ +++.++++-...+.+..+|.++.-
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~---------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTEET---------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH---------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4568888899999999999999999988666544 556566655555555555544443
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.38 E-value=0.0042 Score=57.38 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=117.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hcCCchhH----------HHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCR-EYNMKITE----------GTNVLFFWSAASNFLPILGAFLADSYV 90 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~----------~~~~~~~~~~~~~i~~~~~G~laDr~~ 90 (225)
++-.|.++.+.+..++..++++.+..+...|..+ .+|-++.+ ..+.....++...+.+++--++.+|+
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3455777888889999999888888888888764 45543321 23344555555566677788899997
Q ss_pred cc-hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhcc
Q 041538 91 GR-YAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQL 169 (225)
Q Consensus 91 Gr-r~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 169 (225)
|+ |+...++.++..+++....+...... +.+.. .........+.+......+...+.|+..+.....-++++++..
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~ 409 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAK--NSRYY-DGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRS 409 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhh--ccccc-cccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc
Confidence 95 56667777777777777765442110 00000 0000000011122355666777788888888888889999988
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccC--cchhhhhhh
Q 041538 170 EKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG--WKVGFGIPA 222 (225)
Q Consensus 170 p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g--~~~~f~~~~ 222 (225)
|++++ ..+...+..|.+..+.-++..+..|.+.+.+| -.+.+.+++
T Consensus 410 ~~~~~-------~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~g 457 (477)
T TIGR01301 410 SNLGA-------GQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGA 457 (477)
T ss_pred cccCC-------CCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHH
Confidence 86442 15788888888888777777766666444333 334444433
No 236
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.38 E-value=0.002 Score=57.89 Aligned_cols=140 Identities=17% Similarity=0.085 Sum_probs=95.9
Q ss_pred HhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhcc-----chHH-HHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 041538 53 LCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVG-----RYAM-IGFGCITCLLGMVLLWLTTIFPHARPLACDY 126 (225)
Q Consensus 53 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----rr~~-~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 126 (225)
+..|++++..-.+..+.+-..... ..+..|+.||+. + ||.. +..+.+.+..+..++.+..-...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~-------- 75 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA-------- 75 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 445788887777777766665555 488899999997 5 5544 45555566666666655431111
Q ss_pred ccccccccccc--hhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 127 TLRDSCESATG--SQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 127 ~~~~~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
+....+... .......++..+.|+|.+....+..++.+|..|+++ |.+..++.+...-+|.+++..+
T Consensus 76 --~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~---------R~~~v~ivw~Mli~G~iv~ai~ 144 (403)
T PF03209_consen 76 --ESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER---------RPRVVAIVWVMLIVGIIVSAIV 144 (403)
T ss_pred --ccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh---------hhhhHHHHHHHHHHHHHHHHHH
Confidence 000000011 123345566677888888888999999999999866 8999999999999999999999
Q ss_pred hhheecccC
Q 041538 205 IVYIQDNLG 213 (225)
Q Consensus 205 ~~~l~~~~g 213 (225)
.+.+.+.+.
T Consensus 145 ~g~lL~~~s 153 (403)
T PF03209_consen 145 FGRLLDPFS 153 (403)
T ss_pred HHHHccccC
Confidence 997766543
No 237
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.35 E-value=0.0011 Score=59.85 Aligned_cols=128 Identities=17% Similarity=0.092 Sum_probs=88.4
Q ss_pred hhHHHHHHHHhHhcCC---chhHH----HHHHHHHHHHHHHHHHHHHHHhHhhccchHH-HHHHHHHHHHHHHHHHHhhh
Q 041538 44 GFMPNMILYLCREYNM---KITEG----TNVLFFWSAASNFLPILGAFLADSYVGRYAM-IGFGCITCLLGMVLLWLTTI 115 (225)
Q Consensus 44 ~~~~~l~~yl~~~~~~---~~~~~----~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-~~~~~~~~~i~~~~l~~~~~ 115 (225)
.+.++.|.|++++.+- ++.+. +...++......+..|+-|-++|+. |+||- +.+..++.++..+.+++..
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~- 110 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP- 110 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC-
Confidence 3466778999887654 44433 4456777777888899999999998 86664 5555567777777777655
Q ss_pred cCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHh
Q 041538 116 FPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVS 195 (225)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ 195 (225)
+++.+....+..++..++........++++.|..++++ .++.++..+-...
T Consensus 111 --------------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~---------~~riS~lg~~~gy 161 (438)
T COG2270 111 --------------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN---------MGRISGLGWALGY 161 (438)
T ss_pred --------------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc---------cCccccccccccc
Confidence 12355666666777888888888899999999988865 3344444445556
Q ss_pred hhhhhHH
Q 041538 196 ASSMVAV 202 (225)
Q Consensus 196 ig~~~g~ 202 (225)
+|+.+.-
T Consensus 162 lgs~i~l 168 (438)
T COG2270 162 LGSVILL 168 (438)
T ss_pred ccchHHH
Confidence 6665433
No 238
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0021 Score=57.51 Aligned_cols=150 Identities=12% Similarity=0.052 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHH-hHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH-HHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYL-CREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI-TCLLG 106 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~-~~~i~ 106 (225)
+..+....+.....|....+...++ ++.+++++.+.+.+....+....+.+..-....||..|.-+....-.+ ++.-.
T Consensus 263 ~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~ 342 (451)
T KOG2615|consen 263 LRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPA 342 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHH
Confidence 3344444443333334444444445 677999999999999988888888888888888887444444333333 33222
Q ss_pred HHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHH
Q 041538 107 MVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSY 186 (225)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~ 186 (225)
..++.... ...+++.+..+..+..+...++...++....|++. |+..
T Consensus 343 ~llls~~~------------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q---------rG~~ 389 (451)
T KOG2615|consen 343 FLLLSLAR------------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ---------RGTL 389 (451)
T ss_pred HHHHhccc------------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc---------chHH
Confidence 22222221 23558888888888888888999999999888866 8999
Q ss_pred HHHHHHHHhhhhhhHHHhhhheecc
Q 041538 187 FSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 187 ~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
.+.....+.++=++||.+.|.+..+
T Consensus 390 ~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 390 NGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHHHHhhhhhhheeEEE
Confidence 9999999999999999999877653
No 239
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.24 E-value=0.0036 Score=44.13 Aligned_cols=67 Identities=10% Similarity=0.050 Sum_probs=58.1
Q ss_pred HHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh
Q 041538 46 MPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT 114 (225)
Q Consensus 46 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~ 114 (225)
.+.+ +.++++.++|.++.+++.+...+++.++.+...++.++. .+++.+..+.+..++....+.+..
T Consensus 12 TplL-P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLL-PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444 457778899999999999999999999999999999996 888899999888888888888765
No 240
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.20 E-value=0.00027 Score=64.39 Aligned_cols=169 Identities=15% Similarity=0.080 Sum_probs=105.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHH--------HHHHHHHHHHH-HHHHHHHHhHhhccchHHH
Q 041538 26 RTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTN--------VLFFWSAASNF-LPILGAFLADSYVGRYAMI 96 (225)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~--------~~~~~~~~~~i-~~~~~G~laDr~~Grr~~~ 96 (225)
+.+.......|....++|+...+....++ +.++.+++... ...+......+ +..+..++.|++ ||++.-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 44445556777777788887776666555 44544443322 12222223333 556677889997 999998
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCC
Q 041538 97 GFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIK 176 (225)
Q Consensus 97 ~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~ 176 (225)
+.+..++.+..+.+...-+ + .. .+.+ ...++.. .+-+++-+.......+-+|.||++.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~--~-------------~~-~~~G-f~v~y~l--~~ff~NFGPn~ttfivpaE~FParv--- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYN--Q-------------LE-NTIG-FVVLYSL--TFFFGNFGPNATTFIVPAEIFPARV--- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCcc--c-------------cc-ccCc-eeehHHH--HHHHHhcCCCceeEEeehhhchHHH---
Confidence 8888777766655554221 0 00 1111 1112222 1222333334445566689999944
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhHHHhhhheec-----ccCcchhhhhhhcc
Q 041538 177 SKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQD-----NLGWKVGFGIPAAI 224 (225)
Q Consensus 177 ~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~-----~~g~~~~f~~~~~~ 224 (225)
|++.-++...++-+|+++|.....++.+ ..|.+..|++.+..
T Consensus 440 ------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~ 486 (538)
T KOG0252|consen 440 ------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGC 486 (538)
T ss_pred ------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHH
Confidence 8999999999999999999999999998 67888888776543
No 241
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.06 E-value=0.00014 Score=68.14 Aligned_cols=175 Identities=12% Similarity=0.159 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHH-HHHHHHHHHHHHhHhh-ccchHHHHHHHHHHHHH
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSA-ASNFLPILGAFLADSY-VGRYAMIGFGCITCLLG 106 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~-~Grr~~~~~~~~~~~i~ 106 (225)
.+..+....+.....++.+++|.|++.+++.+++++..+.....+ +..++.+++|++..|+ ++.|+++.+..+..++.
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 344557777888888999999999999999999999888765555 6778999999999998 55666665555544444
Q ss_pred HHH---HHHh--hhcC-CCCCCcc----------------ccc--------cccccccccchhHHHHHHHHHHHHHhCcc
Q 041538 107 MVL---LWLT--TIFP-HARPLAC----------------DYT--------LRDSCESATGSQLMLLYLAFGLMSLGGGG 156 (225)
Q Consensus 107 ~~~---l~~~--~~~~-~~~~~~~----------------~~~--------~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 156 (225)
.+. +.+. .+.+ ..++..| +.. .+-.|...=......+.+...+..+..+.
T Consensus 388 ~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~ 467 (539)
T PF03137_consen 388 VILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFM 467 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHh
Confidence 332 1111 0001 0111111 110 01123222011233344444444444444
Q ss_pred cchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH-HhhhhhhHHHhhhheeccc
Q 041538 157 IRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS-VSASSMVAVTFIVYIQDNL 212 (225)
Q Consensus 157 ~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~-~~ig~~~g~~l~~~l~~~~ 212 (225)
.........-+..|+++ |+-+.++.... .-+|.+=||++.|.+.|..
T Consensus 468 ~~~p~~~i~LR~V~~~~---------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 468 SQVPSTLITLRCVPPEQ---------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred cccchheeeeccCChhh---------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 44445556668888876 67777776654 4677788999999998864
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.95 E-value=0.0036 Score=58.16 Aligned_cols=153 Identities=8% Similarity=-0.019 Sum_probs=108.9
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhh
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTT 114 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~ 114 (225)
.++..++...+.+++ .+-.++.+-.+.-.+.+....-.+-...-++.+++..|+ |+-+++.++.....+=........
T Consensus 380 av~mG~g~~lv~tFL-fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFL-FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHH-HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc
Confidence 333333433444444 333445665666666566666666677788889999998 999999988776665555555444
Q ss_pred hcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH-H
Q 041538 115 IFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV-S 193 (225)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~-~ 193 (225)
++++..-.-++.++-.+.++.++.+++++..||+- |+++.++... .
T Consensus 458 ------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l---------~at~Q~l~~g~f 504 (618)
T KOG3762|consen 458 ------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL---------RATAQGLLQGIF 504 (618)
T ss_pred ------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc---------hHHHHHHHHHHh
Confidence 45556667788999999999999999999999966 6777777655 4
Q ss_pred HhhhhhhHHHhhhheecccCcchhhhhhh
Q 041538 194 VSASSMVAVTFIVYIQDNLGWKVGFGIPA 222 (225)
Q Consensus 194 ~~ig~~~g~~l~~~l~~~~g~~~~f~~~~ 222 (225)
-.+|-.+|.+++|.+.+.+|-+..|.+.+
T Consensus 505 ~GlG~g~GslIGG~~v~~fg~~ttf~~~g 533 (618)
T KOG3762|consen 505 HGLGKGLGSLIGGFVVERFGARTTFRIFG 533 (618)
T ss_pred cccCcchhhhhhhhhheeehhHHHHHHHH
Confidence 58888889999998888887666555443
No 243
>PTZ00207 hypothetical protein; Provisional
Probab=96.84 E-value=0.0088 Score=56.70 Aligned_cols=146 Identities=11% Similarity=0.068 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhc-CCchhH--HHHHHHHHHHHHHHHHHHHHHHhHhhccchH---------
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREY-NMKITE--GTNVLFFWSAASNFLPILGAFLADSYVGRYA--------- 94 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-~~~~~~--~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~--------- 94 (225)
.+|+++...++....-..+..|+-...+ .+ |.+.++ ....+++.++++.++.+.+|++.... -||+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~-sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt~ 431 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYT-ALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPITI 431 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHH-HhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-HhhccccccchhH
Confidence 3455556666655555555666654444 45 663333 23378999999999999999998332 2222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCC
Q 041538 95 MIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDG 174 (225)
Q Consensus 95 ~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~ 174 (225)
.+.+..+ +.++++++++.. | ...++++.++.|++.|..++......+|+|. ++
T Consensus 432 ~l~~~~~-~~~~~lll~~~~--p----------------------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~- 484 (591)
T PTZ00207 432 ALFIPSV-CIITMLTLFLTL--P----------------------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KD- 484 (591)
T ss_pred HHHHHHH-HHHHHHHHHHHC--C----------------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc-
Confidence 2333333 666777666643 1 1359999999999999999999999999999 55
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhhhH-HHhhhhee
Q 041538 175 IKSKSEGALKSYFSWYYVSVSASSMVA-VTFIVYIQ 209 (225)
Q Consensus 175 ~~~~~~~~r~~~~~~~~~~~~ig~~~g-~~l~~~l~ 209 (225)
.+.-+.......-+|+.+= ..+.|.+.
T Consensus 485 --------~g~~yN~~~~a~pigs~~~n~~l~G~~Y 512 (591)
T PTZ00207 485 --------PAKHYNFCFLGSVLSAIFLNRLLYGEWY 512 (591)
T ss_pred --------hHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555442 34455443
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.84 E-value=0.033 Score=51.78 Aligned_cols=143 Identities=13% Similarity=0.019 Sum_probs=91.3
Q ss_pred HHHHhhHHHHHHHHhHhc-----CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccch-H------HHHHHHHHHHHHH
Q 041538 40 MASTGFMPNMILYLCREY-----NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRY-A------MIGFGCITCLLGM 107 (225)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr-~------~~~~~~~~~~i~~ 107 (225)
..|.-..+.+..|..++. |++- ...+..++......+..|+.+++=.|. +|| | =+.++.++..++.
T Consensus 282 ~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f 359 (493)
T PRK15462 282 AFAQQGGSSISLYIDRFVNRDMFGYTV-PTAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGF 359 (493)
T ss_pred HHHHHhhHHHHHHHHHhccchhcceee-CHHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHH
Confidence 344444555556666542 2221 244555666666777777777776664 432 2 1666777777777
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHH
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~ 187 (225)
.++.+...... + ....++..++....++++|.-...|...+++++..|++. ++..+
T Consensus 360 ~~l~~~~~~~~----------~-----~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~---------~g~~m 415 (493)
T PRK15462 360 CILTLSARWSA----------M-----YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV---------TGVLT 415 (493)
T ss_pred HHHHHHHhhcC----------C-----CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH---------HHHHH
Confidence 77766442111 0 011345567788888999999999999999999999844 89988
Q ss_pred HHHHHH-HhhhhhhHHHhhhhe
Q 041538 188 SWYYVS-VSASSMVAVTFIVYI 208 (225)
Q Consensus 188 ~~~~~~-~~ig~~~g~~l~~~l 208 (225)
+.+... ..+|..++..+.++.
T Consensus 416 g~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 416 GIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 888663 357766666665544
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.68 E-value=0.015 Score=53.55 Aligned_cols=127 Identities=18% Similarity=0.211 Sum_probs=98.8
Q ss_pred HHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHH-HHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 041538 48 NMILYLCREYNMKITEGTNVLFFWSAASNFLPILGA-FLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDY 126 (225)
Q Consensus 48 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G-~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 126 (225)
.++.|+...+++++.+.+...........+.+++.. .+.-. +|-|+.+..+...-.+......+...
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~~----------- 330 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFATE----------- 330 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhcc-----------
Confidence 446778889999999999999999999999999988 55555 59999888888888888888787662
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 127 TLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
.++++....+.++ .....+...++.+.+.++++ ++.++++.+....+.+.++|.+-+
T Consensus 331 -------------~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e---------~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 331 -------------TWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE---------QGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred -------------chhhhHHHHHHHh-hcchhHHHHhHHHhhccccc---------ccchhhHHHHHHHHhhhhhHHHHH
Confidence 2334444444443 34457888899999888866 788899998888999989888877
Q ss_pred hee
Q 041538 207 YIQ 209 (225)
Q Consensus 207 ~l~ 209 (225)
.+.
T Consensus 388 ~i~ 390 (463)
T KOG2816|consen 388 NIF 390 (463)
T ss_pred HHH
Confidence 653
No 246
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.48 E-value=0.08 Score=48.90 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHh
Q 041538 74 ASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLG 153 (225)
Q Consensus 74 ~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 153 (225)
.....-...+..-||+ |||.....+..+..++.+...+... .....+......+...+
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ 419 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPD---------------------DLGGWLHWILPLLGKFF 419 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhc---------------------cchhHHHHHHHHHHHHH
Confidence 4444455568999998 9999999998888888877777551 11101122222222222
Q ss_pred CcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheec
Q 041538 154 GGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQD 210 (225)
Q Consensus 154 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~ 210 (225)
.+........+.+|++|+.. |..+.+.......++++++|.+......
T Consensus 420 ~~~~~~~~~~~~~el~pt~~---------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 420 IGSAFNLIFLYSAELIPTVV---------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHhhccHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334445788899999955 8999999999999999999988865543
No 247
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.025 Score=51.72 Aligned_cols=133 Identities=11% Similarity=0.001 Sum_probs=76.6
Q ss_pred hHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhc------cchHHHHHHHHHHHHHHHHHH-HhhhcCCCCCCcccc
Q 041538 54 CREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYV------GRYAMIGFGCITCLLGMVLLW-LTTIFPHARPLACDY 126 (225)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~------Grr~~~~~~~~~~~i~~~~l~-~~~~~~~~~~~~~~~ 126 (225)
.+-.|++..+..+...+...+..++.++||.++||+. +|.++=.+.+.+.+.....+. +.. .
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~---~-------- 343 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFP---A-------- 343 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHH---h--------
Confidence 3445677777788888888999999999999999941 233332222222222221111 111 0
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhCc-ccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHH-hhhhhhHHHh
Q 041538 127 TLRDSCESATGSQLMLLYLAFGLMSLGGG-GIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSV-SASSMVAVTF 204 (225)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~-~ig~~~g~~l 204 (225)
.+.....+.+.+++++.-.. ..++....+..+..|++. |.+++++.+... ..|..-+|.+
T Consensus 344 ---------~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~---------Rt~a~a~~~~~~h~fgd~~~p~i 405 (493)
T KOG1330|consen 344 ---------FTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSR---------RTTAYALDTVFEHIFGDAASPYI 405 (493)
T ss_pred ---------hhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCccc---------ccHHHHHHHHHHHHhccCCCcce
Confidence 01122223333333332221 123445556778888865 888888876654 6666667779
Q ss_pred hhheeccc-Ccc
Q 041538 205 IVYIQDNL-GWK 215 (225)
Q Consensus 205 ~~~l~~~~-g~~ 215 (225)
.|.+.|+. ||+
T Consensus 406 vGilsd~l~g~~ 417 (493)
T KOG1330|consen 406 VGILSDKLRGYK 417 (493)
T ss_pred ehhHHHHhhCCC
Confidence 99998875 665
No 248
>PRK03612 spermidine synthase; Provisional
Probab=96.41 E-value=0.19 Score=47.08 Aligned_cols=140 Identities=15% Similarity=0.098 Sum_probs=74.1
Q ss_pred hhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH---HHHHHHhhhcCCCC
Q 041538 44 GFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG---MVLLWLTTIFPHAR 120 (225)
Q Consensus 44 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~---~~~l~~~~~~~~~~ 120 (225)
.....+...+...+|-+..+.+.+++++..+..++..++++++++. -|+. ...-..+..++ ..++.......
T Consensus 32 ~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~--- 106 (521)
T PRK03612 32 VYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGF-VAVELLLALLGGLSALILYAAFAFQ--- 106 (521)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 3344445566667888888889999999999999888888877554 2222 11111111111 11111111000
Q ss_pred CCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhh
Q 041538 121 PLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMV 200 (225)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 200 (225)
......++...++.++..|+..|....+..+.... + -++..+-.|....+|+++
T Consensus 107 ----------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-~---------~g~~~g~ly~~ntlGa~~ 160 (521)
T PRK03612 107 ----------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-H---------LGHNVATVLAADYLGALV 160 (521)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c---------hhhhhhhhHhHHhHHHHH
Confidence 00112223333445555555554443333322110 1 234456678888999999
Q ss_pred HHHhhhheec-ccCc
Q 041538 201 AVTFIVYIQD-NLGW 214 (225)
Q Consensus 201 g~~l~~~l~~-~~g~ 214 (225)
|.++.+++.- ..|-
T Consensus 161 G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 161 GGLAFPFLLLPRLGL 175 (521)
T ss_pred HHHHHHHHHHHhcch
Confidence 9999886543 4554
No 249
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.37 E-value=0.047 Score=49.50 Aligned_cols=129 Identities=12% Similarity=0.129 Sum_probs=86.5
Q ss_pred hHHHHHHHHhHh-cCCchhHHH-HHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 041538 45 FMPNMILYLCRE-YNMKITEGT-NVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPL 122 (225)
Q Consensus 45 ~~~~l~~yl~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 122 (225)
.-+++..|+.+. .|++..|.. -+.-.+.-......++...+.|.+ |.|+++++..+..++...++.+..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~-------- 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT-------- 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC--------
Confidence 367777999887 899999875 466777777788888899999997 999999998888877777777655
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHH
Q 041538 123 ACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAV 202 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~ 202 (225)
++..+-+.-+..|+..+.. .+..+++=...|+++ ..++.+....+.-+|-.++.
T Consensus 93 ----------------sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~---------yq~vts~~raa~l~g~~~s~ 146 (412)
T PF01770_consen 93 ----------------SVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEH---------YQKVTSYTRAATLVGRFISS 146 (412)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHH---------HHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666665543 344555544455422 55556555555555544444
Q ss_pred Hhhhhe
Q 041538 203 TFIVYI 208 (225)
Q Consensus 203 ~l~~~l 208 (225)
.++-.+
T Consensus 147 ~lgQll 152 (412)
T PF01770_consen 147 LLGQLL 152 (412)
T ss_pred HHHHHH
Confidence 444433
No 250
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.13 E-value=0.17 Score=46.81 Aligned_cols=165 Identities=9% Similarity=-0.005 Sum_probs=95.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCch-----hHHHHHHHHHHHHHHHH-HHHHHHHhHhhccchHHHHH
Q 041538 25 IRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKI-----TEGTNVLFFWSAASNFL-PILGAFLADSYVGRYAMIGF 98 (225)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~-----~~~~~~~~~~~~~~~i~-~~~~G~laDr~~Grr~~~~~ 98 (225)
+|.++...+..++..+.|+...+ +.+.+..+. ....++.+....-..+. .++-+++++|+ +|+|.+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 45566666777777777776655 666666632 23344444343333333 78889999997 99999888
Q ss_pred HHHHHHHHHHHHHHhhh-cCCCCCCccccccccccccccch----------h--HHHHHHHHHHHHHhCcccchhhhhhh
Q 041538 99 GCITCLLGMVLLWLTTI-FPHARPLACDYTLRDSCESATGS----------Q--LMLLYLAFGLMSLGGGGIRSSSLAFG 165 (225)
Q Consensus 99 ~~~~~~i~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~l~g~g~g~~~~~~~~~~ 165 (225)
....+.....++.+... .+...||+- ..+......+. + ...+++..-+.+.. ...-..+++.
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~---~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~--vvS~lFW~fa 154 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTA---LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSV--VLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcH---HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 77776666655555421 111111100 00000000000 0 01222222222211 1112567888
Q ss_pred hhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 166 ADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 166 ~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
.|.+..++ -.+.+.+....+|+|..+++.+..++.
T Consensus 155 ndi~t~~q---------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE---------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988755 688899999999999999999988875
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.05 E-value=0.0073 Score=56.18 Aligned_cols=69 Identities=14% Similarity=0.143 Sum_probs=54.3
Q ss_pred HHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHH
Q 041538 36 AFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLG 106 (225)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~ 106 (225)
++....+..+.+.++.|.. .+|+++++.+.+...--+..+++.++.|++|||+ -+||.++++..+....
T Consensus 21 ~~~~~~~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 21 LFFGARFGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVT 89 (618)
T ss_pred eeeeecccccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHH
Confidence 3333444566778888877 6899999999999999999999999999999998 6666666666544433
No 252
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.99 E-value=0.0099 Score=51.60 Aligned_cols=63 Identities=11% Similarity=-0.066 Sum_probs=55.7
Q ss_pred hhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhee
Q 041538 138 SQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQ 209 (225)
Q Consensus 138 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~ 209 (225)
.+...+.++.++.+.|.+...+..++++++..|+++ +++..++.+....+|..++|.+.+.+.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~---------~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET---------AASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch---------HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 356778999999999999999999999999988755 677788889999999999999999765
No 253
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.85 E-value=0.032 Score=50.93 Aligned_cols=152 Identities=13% Similarity=0.154 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-HHHHHHHHHHHHHH
Q 041538 30 FIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYA-MIGFGCITCLLGMV 108 (225)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-~~~~~~~~~~i~~~ 108 (225)
+..+...+....+++..+.+-.-+. .-|++...++.......+.++++..++|.++||. ...| +..+......++.
T Consensus 270 il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~~- 346 (480)
T KOG2563|consen 270 ILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVGT- 346 (480)
T ss_pred HHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHH-
Confidence 3333333344444444443322222 3467778899999999999999999999999998 5444 3443333333332
Q ss_pred HHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhc-cCCCCCCCccchhhHHHHH
Q 041538 109 LLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQ-LEKGDGIKSKSEGALKSYF 187 (225)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~-~p~~~~~~~~~~~~r~~~~ 187 (225)
++....... ......++....++|.+..+..|...-+..|. ||..+ ++.+
T Consensus 347 ~~l~~~t~~-------------------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E----------~tSs 397 (480)
T KOG2563|consen 347 LMLLTCTLF-------------------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE----------GTSS 397 (480)
T ss_pred HHHHHhhcc-------------------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC----------cccc
Confidence 222221111 11123355555666666666777777777776 56544 3335
Q ss_pred HHHHHHHhhhhhhHHHhhhheecccC
Q 041538 188 SWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 188 ~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
+..+.++++.+.+-.++.+...+..+
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccC
Confidence 66666777777777777777666554
No 254
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.65 E-value=0.023 Score=54.80 Aligned_cols=79 Identities=14% Similarity=0.253 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHH-HHHHHHHHHHHHHHHHhHhh-ccchHHHHHHHHHHHH
Q 041538 28 LPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLF-FWSAASNFLPILGAFLADSY-VGRYAMIGFGCITCLL 105 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~G~laDr~-~Grr~~~~~~~~~~~i 105 (225)
....++...++...+.+..+++|.|++++++.+.+.+..+.. +..-+..++.+++|++..|+ +..|.+..+..+...+
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 345567888899999999999999999999999999988874 44445677899999999998 5566665555544433
Q ss_pred H
Q 041538 106 G 106 (225)
Q Consensus 106 ~ 106 (225)
.
T Consensus 474 ~ 474 (735)
T KOG3626|consen 474 S 474 (735)
T ss_pred H
Confidence 3
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.59 E-value=1.3 Score=40.60 Aligned_cols=137 Identities=9% Similarity=-0.037 Sum_probs=92.0
Q ss_pred hHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 041538 45 FMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLAC 124 (225)
Q Consensus 45 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 124 (225)
+-..+..|+..+ |+++...+..=....+....++.+..++-+|+ |..|.=.++...-..+..+.....-.+.
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~------ 348 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPG------ 348 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCC------
Confidence 344556888877 99999999999999999999999999999998 9999877776643322222221110110
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 125 DYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
+ + ....+...+..+..+-=+|.=+..-+..-++-|..|+++ |+..++..+...++...+...+
T Consensus 349 ----~-~---~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~---------Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 349 ----S-P---FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE---------RGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred ----C-C---chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH---------hhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 001133444445555446666667777777777777655 8999999888888888766544
Q ss_pred hh
Q 041538 205 IV 206 (225)
Q Consensus 205 ~~ 206 (225)
+-
T Consensus 412 ~i 413 (432)
T PF06963_consen 412 TI 413 (432)
T ss_pred Hh
Confidence 43
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.44 E-value=0.016 Score=53.57 Aligned_cols=192 Identities=15% Similarity=0.084 Sum_probs=109.8
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHH--HHHHHHHHhHhh--ccchHH
Q 041538 20 NPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNF--LPILGAFLADSY--VGRYAM 95 (225)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~G~laDr~--~Grr~~ 95 (225)
..+.+|+..+.++...+.....+....+..+......++++.+++-...........+ ..+...+.--|+ +.+|+.
T Consensus 256 ~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~ 335 (488)
T KOG2325|consen 256 KPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRI 335 (488)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccee
Confidence 3456777777777788888887777677777777777888888775543222222111 122223333332 133444
Q ss_pred HHHHHHHHHHHHHH--HHHhhh-cCCC----CCCccccccccccccccchhHHHHHHH-HHHHHHhCcccchhhhhhhhh
Q 041538 96 IGFGCITCLLGMVL--LWLTTI-FPHA----RPLACDYTLRDSCESATGSQLMLLYLA-FGLMSLGGGGIRSSSLAFGAD 167 (225)
Q Consensus 96 ~~~~~~~~~i~~~~--l~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~ 167 (225)
+..++........+ ..+... .|.. .+..|++....-|...+..+...++.. .+++|.+.........++-++
T Consensus 336 ~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySk 415 (488)
T KOG2325|consen 336 ILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSK 415 (488)
T ss_pred eeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHH
Confidence 44442222222211 111111 1111 122333333335555555555555554 445777777777778888899
Q ss_pred ccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhhh
Q 041538 168 QLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFGI 220 (225)
Q Consensus 168 ~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~~ 220 (225)
+..+.+ .+...+.+.....++-.+||++...+....|.++...+
T Consensus 416 iLgp~~---------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~ 459 (488)
T KOG2325|consen 416 ILGPRD---------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWII 459 (488)
T ss_pred HhCCcc---------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHH
Confidence 999877 46666677778888888999998888777777665443
No 257
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.22 E-value=0.021 Score=49.30 Aligned_cols=94 Identities=21% Similarity=0.178 Sum_probs=63.7
Q ss_pred HHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccc
Q 041538 51 LYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRD 130 (225)
Q Consensus 51 ~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (225)
.|+.+++++.+.+.+.+........++.-.+.|-++||- ||||.-...++.+++++ ++-.
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiLsC----iTKh--------------- 120 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYILSC----ITKH--------------- 120 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHHHH----Hhhc---------------
Confidence 456678899999998887777777777788889999997 99998766666555443 3321
Q ss_pred ccccccchhHHHHHHHHHHHHHhCcccchhhhh-hhhhccC
Q 041538 131 SCESATGSQLMLLYLAFGLMSLGGGGIRSSSLA-FGADQLE 170 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~p 170 (225)
..+.-++++++++.|+.......+.-+ +++|.-+
T Consensus 121 ------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 121 ------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred ------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 123345788888888776655433322 3444443
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.66 E-value=5.6 Score=36.44 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 27 TLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
..+.+-...++.+..--.+..-.+.|+.+-+.-+.--....-..-.....++.+..|...||. .|.|++..+.+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~ 76 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLV 76 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHH
Confidence 345555677777777777888888888877654555555555666677777888889999997 99998776654
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.27 E-value=0.71 Score=41.81 Aligned_cols=158 Identities=17% Similarity=0.179 Sum_probs=87.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhH-----hhccchHH
Q 041538 21 PKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLAD-----SYVGRYAM 95 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD-----r~~Grr~~ 95 (225)
.+++.+.+..+++.......- ++....+|..++ .-|.|-++-+..... ..-...-++...+-| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS~a--y~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFSFA--YWPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhhhh--hhHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 466777777766666666654 456666666666 556665554433322 222334667788888 87 99997
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCC
Q 041538 96 IGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGI 175 (225)
Q Consensus 96 ~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~ 175 (225)
-++=+ -+.+|.+++.++...+...+ .+....++........+.-+..+....+.-.....+..+++
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~~~g-----------~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-- 166 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDRGLG-----------GNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-- 166 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCcccc-----------cCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--
Confidence 55432 33456666666542222111 01122233334444455555666666666666666766654
Q ss_pred CccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 176 KSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 176 ~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
.+-+...+..+.+.|..++-.+
T Consensus 167 -------lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 167 -------LGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred -------cCchhHHHHHHHhhhHHhhcce
Confidence 4555555556666666665443
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.07 E-value=2.8 Score=38.91 Aligned_cols=139 Identities=17% Similarity=0.111 Sum_probs=83.4
Q ss_pred hhHHHHHHHHhHhcCCc----hhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-------HHHHHHHHHHHHHHHHHH
Q 041538 44 GFMPNMILYLCREYNMK----ITEGTNVLFFWSAASNFLPILGAFLADSYVGRYA-------MIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 44 ~~~~~l~~yl~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-------~~~~~~~~~~i~~~~l~~ 112 (225)
-..+.+..|.++..+.+ +-...+..++..+...+..++..++--|. ++++ -+.++..++..+.+++..
T Consensus 302 Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~ 380 (498)
T COG3104 302 QMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLL 380 (498)
T ss_pred hccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 34455556665432222 11233444555666677777777887775 4441 244555566666655555
Q ss_pred hhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 041538 113 TTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYV 192 (225)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~ 192 (225)
...... .+ +...+++.++...+++++|.=...|.-.+++.+..|+.- .+..++.+..
T Consensus 381 ~~~~~~---------~~-----~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~---------~s~~ma~wfL 437 (498)
T COG3104 381 AGIWFG---------GP-----SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL---------KSFIMAMWFL 437 (498)
T ss_pred HHHhhc---------CC-----CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH---------HHHHHHHHHH
Confidence 421000 00 123467788889999999998889999999999999832 5666666666
Q ss_pred HHhhhhhhHHHhhh
Q 041538 193 SVSASSMVAVTFIV 206 (225)
Q Consensus 193 ~~~ig~~~g~~l~~ 206 (225)
....|..++..+.+
T Consensus 438 t~a~~~~l~g~va~ 451 (498)
T COG3104 438 TVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHhhceecc
Confidence 66666655555554
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.77 E-value=4.6 Score=37.58 Aligned_cols=170 Identities=9% Similarity=-0.044 Sum_probs=95.1
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCc---hhHHHHHHHHHHH-HHHHHHHHHHHHhHhhccchH
Q 041538 19 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMK---ITEGTNVLFFWSA-ASNFLPILGAFLADSYVGRYA 94 (225)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~---~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~ 94 (225)
+.+|+.++......+..++..+.++.... +.+.+.++ +....++-+.... ...+..++-+++.+++ .|++
T Consensus 20 pi~r~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~ 93 (509)
T COG3202 20 PIRRYELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREK 93 (509)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHH
Confidence 33455566666666677776666554433 45555444 2233444444444 5667788899999997 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccc-----cc-h---------hH--HHHHHHHHHHHHhCccc
Q 041538 95 MIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESA-----TG-S---------QL--MLLYLAFGLMSLGGGGI 157 (225)
Q Consensus 95 ~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~---------~~--~~~~~~~~l~g~g~g~~ 157 (225)
++......+.....+.++.. +|-|+.--+++...+ .+ . .+ .++++.-=+.+ .-..
T Consensus 94 vF~~~~~~F~~fF~LFa~Vi------~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg--slV~ 165 (509)
T COG3202 94 VFYIILGFFLGFFALFAFVI------YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG--SLVL 165 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH------hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH--HHHH
Confidence 98888777766666666643 222222211111111 01 0 00 11111111111 0001
Q ss_pred chhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecc
Q 041538 158 RSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDN 211 (225)
Q Consensus 158 ~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~ 211 (225)
.-..+.+..|+...++ -.+.+.+++...|++..++..+..++.++
T Consensus 166 S~lFw~faNeitt~~e---------akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 166 SLLFWQFANEITTIEE---------AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHhhhHHH---------hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1134556666666533 67888899999999999998888887653
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.49 E-value=9.8 Score=35.20 Aligned_cols=108 Identities=20% Similarity=0.217 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhHhh--ccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccc--cchhHHHHHHHHH
Q 041538 73 AASNFLPILGAFLADSY--VGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESA--TGSQLMLLYLAFG 148 (225)
Q Consensus 73 ~~~~i~~~~~G~laDr~--~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 148 (225)
.+..++....+.+.+|. +||++.+.++..+..++.++.-+.. |. |...+++.... -+.+..+..+.-.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~------dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PN------DAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cc------cCCCCCCcccccccccchhHHHHHHH
Confidence 33444445556666555 5899999998888777766555432 21 00001111000 1123344555567
Q ss_pred HHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhh
Q 041538 149 LMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASS 198 (225)
Q Consensus 149 l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 198 (225)
+.|++.+..+...+.++.+.+|. + |...++++-+-..+++
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~~~-~---------~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLYPD-D---------RAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcC-c---------hHHHHHHHHHHHHHHH
Confidence 78899998889999999999953 4 4555555444444433
No 263
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.96 E-value=2.9 Score=38.64 Aligned_cols=83 Identities=8% Similarity=0.025 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHH
Q 041538 65 TNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLY 144 (225)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (225)
-....+......+..++++.+-|+. |.|..+.++...+..-..-+... +...++
T Consensus 53 y~~~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-------------------------N~y~~y 106 (461)
T KOG3098|consen 53 YYGQAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-------------------------NSYYLY 106 (461)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-------------------------chHHHH
Confidence 3336666777888899999999997 99999999988776544433332 346689
Q ss_pred HHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 145 LAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 145 ~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
..-.+.|+|.+..+.....++++..+++.
T Consensus 107 fssallG~Gaallw~GqG~ylt~~st~~t 135 (461)
T KOG3098|consen 107 FSSALLGFGAALLWTGQGGYLTSNSTRET 135 (461)
T ss_pred HHHHHhhhhHHheecccceehhhcCChhh
Confidence 99999999999988888888888777654
No 264
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=87.81 E-value=3.4 Score=37.47 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhhe
Q 041538 139 QLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYI 208 (225)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l 208 (225)
+.++.++..+..|+..|+.+......+.|..|+++ |.-..+....+-++|-.++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~---------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED---------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH---------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34455555666777778888888888888877755 44444454445555555544444333
No 265
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=85.93 E-value=17 Score=32.48 Aligned_cols=151 Identities=9% Similarity=0.030 Sum_probs=71.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCIT 102 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (225)
..-|.++++....+....+|.+. .++......++| +... ..........+++.+.+..++ |.|.++.++...
T Consensus 26 ~~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg----~~sl--~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~ 97 (390)
T KOG3097|consen 26 GILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLG----TVSL--GALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVFP 97 (390)
T ss_pred chhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCcc----cchh--hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 34466666666555566665554 444443333222 2211 111223333445555777776 999888876443
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCC--Cc--c
Q 041538 103 CLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGI--KS--K 178 (225)
Q Consensus 103 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~--~~--~ 178 (225)
+. +..+.+.+ | ...-+.-+-+..|++.+..+.+--.++++.-...... +. +
T Consensus 98 Y~-----lyiA~Nl~----p----------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~ 152 (390)
T KOG3097|consen 98 YA-----LYIAANLE----P----------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGD 152 (390)
T ss_pred HH-----HHHHhhcc----h----------------hHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccC
Confidence 32 22222111 1 1222444556667777777766666665554322100 00 0
Q ss_pred c--hhhHHHHHHHHHHHHhhhhhhHHHhhh
Q 041538 179 S--EGALKSYFSWYYVSVSASSMVAVTFIV 206 (225)
Q Consensus 179 ~--~~~r~~~~~~~~~~~~ig~~~g~~l~~ 206 (225)
+ -+-.+-.+.+++...-+|..++..+..
T Consensus 153 ~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 153 GMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred ceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011244455555556666555555544
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.78 E-value=10 Score=34.80 Aligned_cols=55 Identities=9% Similarity=0.126 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHh
Q 041538 141 MLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTF 204 (225)
Q Consensus 141 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l 204 (225)
...++...++|+-+|-.......+..+..++++ |..+..+..++.++|-.+|..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e---------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE---------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778888888766666666666655533 4444445555555555555444
No 267
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=82.12 E-value=15 Score=25.98 Aligned_cols=44 Identities=23% Similarity=0.092 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHH
Q 041538 64 GTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMV 108 (225)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~ 108 (225)
.+.......++..+++.+.|++.|.. |.+..+........++.+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHH
Confidence 34555667778888899999999987 877776665555444433
No 268
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=78.80 E-value=39 Score=30.82 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHH
Q 041538 65 TNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLY 144 (225)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (225)
|.+-....+.+.+..+..|++..++ .+..-+.++..-...+..++.+.. +.+.++.+
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~----------------------t~~Iwv~Y 344 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSF----------------------TGNIWVCY 344 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHH----------------------hhHHHHHH
Confidence 5566667777788888899996665 665555555443333333333332 23567778
Q ss_pred HHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 145 LAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 145 ~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
++.++.....-...+....=++.....+. .+-.|+.+.+.
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~~e~---------yaLVFGiNtf~ 384 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLSEER---------YALVFGINTFV 384 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc---------eeeeeeeHHHH
Confidence 88777665554444444444455444322 67777775553
No 269
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=76.47 E-value=22 Score=33.08 Aligned_cols=90 Identities=18% Similarity=0.069 Sum_probs=57.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hcCCchh----------------HHHHHHHHHHHHHHHHHHHHHH
Q 041538 22 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCR-EYNMKIT----------------EGTNVLFFWSAASNFLPILGAF 84 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~----------------~~~~~~~~~~~~~~i~~~~~G~ 84 (225)
++.+|.++.+.+..++...+.+...-+-..|+-+ .++=|+. .-.+-..++++...+.+...-+
T Consensus 275 ~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~ 354 (498)
T KOG0637|consen 275 KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEK 354 (498)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888877776666655555533 2332221 1234567778888888999999
Q ss_pred HhHhhccchHHHHHHHHHHHHHHHHHHH
Q 041538 85 LADSYVGRYAMIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 85 laDr~~Grr~~~~~~~~~~~i~~~~l~~ 112 (225)
+.||+ |-|+.+..+...+.++..++.+
T Consensus 355 l~~~~-g~r~~y~~~~~~f~~~~~~~gl 381 (498)
T KOG0637|consen 355 LSRKF-GTRKRYWGGVNAFGLATGLAGL 381 (498)
T ss_pred HHHhc-CcceEEeehhHHHHHHHHHHhh
Confidence 99998 8555555444444455554443
No 270
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.15 E-value=14 Score=27.25 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhHhhccchHHHHHHHHHH
Q 041538 73 AASNFLPILGAFLADSYVGRYAMIGFGCITC 103 (225)
Q Consensus 73 ~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (225)
+...+.-...||+-||+.|.++..++..++.
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 3444445667899999999998877654433
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=75.00 E-value=72 Score=29.66 Aligned_cols=151 Identities=11% Similarity=0.077 Sum_probs=80.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccc-----------h-----HHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 041538 58 NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGR-----------Y-----AMIGFGCITCLLGMVLLWLTTIFPHARP 121 (225)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-----------r-----~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 121 (225)
-.+..|+.-......++..++.+++|.+...+ .. . ..+.+..++..+...+.....+... ..
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~-~~ 234 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYF-SKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVL-TD 234 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CC
Confidence 46778888888888888888888888776654 21 1 1222222222222222222221111 00
Q ss_pred Cc-cccc----cccccccc------cchhHHHHHHHHHH--HHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHH
Q 041538 122 LA-CDYT----LRDSCESA------TGSQLMLLYLAFGL--MSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFS 188 (225)
Q Consensus 122 ~~-~~~~----~~~~~~~~------~~~~~~~~~~~~~l--~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~ 188 (225)
|. +++. .+.+..+- .-.++.+..++..+ .++.........-..+.+++|.+++ |+..++
T Consensus 235 ~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~--------~~~f~g 306 (472)
T TIGR00769 235 PRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNE--------YSAFMG 306 (472)
T ss_pred ccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--------HHHHHH
Confidence 10 0000 00000000 01123333333333 3333344444555677888876443 888888
Q ss_pred HHHHHHhhhhhhHHHhhhheecccCcchhh
Q 041538 189 WYYVSVSASSMVAVTFIVYIQDNLGWKVGF 218 (225)
Q Consensus 189 ~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f 218 (225)
-++...++...+-..+.+.+.+..||....
T Consensus 307 ~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a 336 (472)
T TIGR00769 307 DFSTWTGVVSVTMMLLSGNVIRKYGWLTAA 336 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 888888888877777778888888997544
No 272
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=73.32 E-value=11 Score=33.02 Aligned_cols=145 Identities=11% Similarity=0.002 Sum_probs=74.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH---HHHHH
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYA---MIGFG 99 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~---~~~~~ 99 (225)
.+.|......+-.+++...|..+..|.|..--++-+.+ -+.+...+..+.++++-+...+..|- |.| .+.+.
T Consensus 246 SD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqiv 320 (454)
T KOG4332|consen 246 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIV 320 (454)
T ss_pred cchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHH
Confidence 34455555666777777766555555543221122222 24444544445555544444444442 222 23333
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccc
Q 041538 100 CITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKS 179 (225)
Q Consensus 100 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~ 179 (225)
.+.... .+++...++.. .| + ..++..-.++..++-.+.|..+|++..+=++..|.+.
T Consensus 321 f~vs~a-~l~Lpilt~~v---sP--------~-----kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------ 377 (454)
T KOG4332|consen 321 FLVSIA-ALLLPILTSSV---SP--------S-----KESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------ 377 (454)
T ss_pred HHHHHH-HHHHHHHHhcc---CC--------C-----cCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------
Confidence 332222 22222222110 00 0 1233344666667777889999998888777777755
Q ss_pred hhhHHHHHHHHHHHHhhhh
Q 041538 180 EGALKSYFSWYYVSVSASS 198 (225)
Q Consensus 180 ~~~r~~~~~~~~~~~~ig~ 198 (225)
|++...++...-++-.
T Consensus 378 ---rstimNfFRvPLnifv 393 (454)
T KOG4332|consen 378 ---RSTIMNFFRVPLNIFV 393 (454)
T ss_pred ---HhhhhhheechhhHhh
Confidence 7777777766655543
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=71.76 E-value=4 Score=37.19 Aligned_cols=130 Identities=14% Similarity=0.021 Sum_probs=71.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH-hhhcCCCCCCccccccccccccccc
Q 041538 59 MKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL-TTIFPHARPLACDYTLRDSCESATG 137 (225)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (225)
+|+...+.+..+..++..++..+....--+. .-|+++....+..++..+.-.. ..+.+.-. +-+
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~------Gi~-------- 316 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLLVTRWNLDL------GIP-------- 316 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEEEEEEeeee------CcC--------
Confidence 8888888777767777677666655544444 6677777666554433322111 11111000 000
Q ss_pred hhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccC
Q 041538 138 SQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLG 213 (225)
Q Consensus 138 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g 213 (225)
.....+.--++..+......-....+.+++-|++. -++.+++.....|+|..++..++..+.+.++
T Consensus 317 -d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~---------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 317 -DQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGS---------EGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred -CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00111111122223333334456677899999876 4777888777778887777777776655443
No 274
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=69.73 E-value=35 Score=31.98 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHH
Q 041538 65 TNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLY 144 (225)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (225)
|.+-.+......+..+..|++-.++ .|---+.++..-..-+.+++.+.. +++.++.|
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gll~~m~~----------------------t~~Iw~~Y 357 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGLVFWMSQ----------------------SHDIWVLY 357 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHhhhhhc----------------------ccchHHHH
Confidence 4444555666777888889987665 443344444333333333333322 34677888
Q ss_pred HHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 145 LAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 145 ~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
++.+++........+....-+++....+. .+-.|+++.+.
T Consensus 358 ~~yvlf~~~y~flitia~~~iA~~L~~~~---------~aLvFGiNtfv 397 (511)
T TIGR00806 358 VTYVLFRGIYQFLVPIATFQIASSLSKEL---------CALVFGINTFV 397 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc---------eEEEEecHHHH
Confidence 88888877766666666666666655433 56666665443
No 275
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.81 E-value=7.1 Score=33.82 Aligned_cols=62 Identities=8% Similarity=0.216 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHH---------hHhhccchHHHH
Q 041538 34 NEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFL---------ADSYVGRYAMIG 97 (225)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l---------aDr~~Grr~~~~ 97 (225)
..+.+....-.+.+++..|+++. +.++.....+.....+...+.+++.|.. -||+ |||+...
T Consensus 25 GHmlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~wh 95 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSWH 95 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeeee
Confidence 45566665667889999999965 7777777788888888888888888644 4787 9988654
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=66.32 E-value=44 Score=30.43 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=56.4
Q ss_pred HHHHHHhhHHHHHHHHhHhcCCchh---HHHHHHHH-HHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHh
Q 041538 38 ERMASTGFMPNMILYLCREYNMKIT---EGTNVLFF-WSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLT 113 (225)
Q Consensus 38 ~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~-~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~ 113 (225)
..+.|....+..|.+..+..+-+.. -....... +.....++.+...++-++ +||..... ..+-.+...++.+-
T Consensus 255 i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~-v~lR~lfiPlF~~c 331 (406)
T KOG1479|consen 255 IFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIP-VLLRLLFIPLFLLC 331 (406)
T ss_pred hheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHH-HHHHHHHHHHHHHh
Confidence 3334444455677777655433222 12222333 556666665555555554 44444333 33332222322322
Q ss_pred hhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 114 TIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
+..|. +. --.+-..++....++|+..|=.......+..+..|+++
T Consensus 332 n~~~~--~v-------------~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 332 NYPPL--PV-------------VFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred ccCCC--Cc-------------eecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 21110 00 01123446677778888888666555555666655544
No 277
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=65.74 E-value=51 Score=24.17 Aligned_cols=53 Identities=15% Similarity=0.216 Sum_probs=43.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHH
Q 041538 59 MKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWL 112 (225)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~ 112 (225)
+.++..+-+...+.....+.+++.+|..|+. -+.|.=.++..++.+|..+..+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 3446778899999999999999999999997 7777777777788777765543
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=63.86 E-value=2.5 Score=36.57 Aligned_cols=33 Identities=6% Similarity=0.241 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 141 MLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 141 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
...++...++|+-+|-.......+..+..++++
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e 281 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE 281 (309)
T ss_dssp ------------------HHHH-----------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHH
Confidence 445666778888888877777777777777555
No 279
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.14 E-value=37 Score=26.60 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=47.8
Q ss_pred HHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhh
Q 041538 83 AFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSL 162 (225)
Q Consensus 83 G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 162 (225)
=.++||. .||+...+.+-..+|+..+...-.+-. .. ...-.....+....+++++|.-++ .+
T Consensus 55 ~~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~--~~-----------~~dvP~~~~~~~S~~~Fg~gllGi---sY 116 (153)
T PF11947_consen 55 EVVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKS--RQ-----------IVDVPPWAVLLVSLVFFGLGLLGI---SY 116 (153)
T ss_pred HHHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHh--cc-----------ccccCchHHHHHHHHHHHHHHHhh---hh
Confidence 3678998 567777777766666554444221110 00 001123344555555565554332 34
Q ss_pred hhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhh
Q 041538 163 AFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMV 200 (225)
Q Consensus 163 ~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 200 (225)
.+++-.-++++ -|+..++-.+-.|++-+.
T Consensus 117 GilSaSWD~~r---------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 117 GILSASWDPER---------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhcccccCCCC---------CCCcccHHHHHHhHHHHH
Confidence 44555555544 377778877777776543
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=55.19 E-value=69 Score=29.92 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhh-cCCCCCCcc--ccccccccccccchhHH----------
Q 041538 75 SNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTI-FPHARPLAC--DYTLRDSCESATGSQLM---------- 141 (225)
Q Consensus 75 ~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~---------- 141 (225)
..+...+-.+++||+ +|.+++.+....+.....+.++... .....||.- ++.. .....+-..
T Consensus 72 a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~----~~~~~~~~~~i~~~~~Wt~ 146 (491)
T PF03219_consen 72 AILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLL----AILPPGFKGFIAMFRNWTF 146 (491)
T ss_pred HHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhh----hhccchHHHHHHHHHHHHH
Confidence 444567788999997 9999888776665555554444321 111122200 0000 000000000
Q ss_pred -HHHHHHHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheec
Q 041538 142 -LLYLAFGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQD 210 (225)
Q Consensus 142 -~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~ 210 (225)
++|+..=+. |.-...-..+.+..|.+..++ -.+.+.++....|+|..++..+..++.+
T Consensus 147 slfYv~aElw--gsvvlSlLFW~fAN~itt~~e---------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 147 SLFYVMAELW--GSVVLSLLFWGFANEITTVEE---------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 111111124677778777644 6788889999999999999888887766
No 281
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=53.55 E-value=53 Score=20.52 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 72 SAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 72 ~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
.....+.....|+..|+.+|.++...+..+
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ 39 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGL 39 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 344555566778888988898776655444
No 282
>PRK02237 hypothetical protein; Provisional
Probab=53.26 E-value=33 Score=25.23 Aligned_cols=49 Identities=16% Similarity=0.163 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHH
Q 041538 62 TEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLW 111 (225)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~ 111 (225)
++++-+...+.....+.+++.+|..|+. -+-|-=.++..++.+|..+..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhe
Confidence 4588899999999999999999999997 777766777777777775543
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=47.89 E-value=2.2e+02 Score=25.99 Aligned_cols=34 Identities=9% Similarity=0.138 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 139 QLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
...+.++...+.+.+.|..+.......++ +|++.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 34555666667777888777766665544 66533
No 284
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=46.74 E-value=1.7e+02 Score=26.68 Aligned_cols=95 Identities=9% Similarity=0.044 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHH
Q 041538 67 VLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLA 146 (225)
Q Consensus 67 ~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+=.+....+.++.+..|++--++ .|..-++++..-...+.+++.+.. +.+.+..+++
T Consensus 276 veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~----------------------t~~Iw~~Ya~ 332 (433)
T KOG3810|consen 276 VEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ----------------------TQHIWVCYAG 332 (433)
T ss_pred HHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc----------------------ccceehhhhh
Confidence 33455566777788888888775 666555544443333333333332 2345667777
Q ss_pred HHHHHHhCcccchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 041538 147 FGLMSLGGGGIRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVS 193 (225)
Q Consensus 147 ~~l~g~g~g~~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~ 193 (225)
.+++..-.....+....-+++....+. .+-.|+...+.
T Consensus 333 yvlfr~~y~l~itiA~~~iA~nL~~e~---------~gLvFGiNTFv 370 (433)
T KOG3810|consen 333 YVLFRVIYQLTITIATFQIARNLSSEL---------FGLVFGINTFV 370 (433)
T ss_pred HHHHHhhHhhhhhHHHHHHHHhhhhhh---------heeeeehHHHH
Confidence 777766555555555555566555533 56666665443
No 285
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=42.69 E-value=2.5e+02 Score=26.01 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=42.6
Q ss_pred cchhhhhhhhhccCCCCCCCccchhhHHHHHHHHHHHHhhhhhhHHHhhhheecccCcchhhh
Q 041538 157 IRSSSLAFGADQLEKGDGIKSKSEGALKSYFSWYYVSVSASSMVAVTFIVYIQDNLGWKVGFG 219 (225)
Q Consensus 157 ~~~~~~~~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g~~l~~~l~~~~g~~~~f~ 219 (225)
......++.++.-||.- -++.+++.+...|+|+-.-..++.++.|.+++.-++.
T Consensus 386 ~fv~~maf~aqisdp~i---------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~~ 439 (510)
T KOG3574|consen 386 MFVSGMAFHAQISDPAI---------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCVL 439 (510)
T ss_pred HHHHHHHHHhhcCCccc---------CccHHHHHHHHHHhcCCcHHHHHHHhcccCceeeccc
Confidence 34455667777777754 5888999999999999999999999999888876554
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=42.46 E-value=2.2e+02 Score=25.91 Aligned_cols=79 Identities=19% Similarity=0.172 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccccccccccchhHHHHHHH
Q 041538 67 VLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLA 146 (225)
Q Consensus 67 ~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+...-..-..+..+++.+..+|+ -.+.-+....++.++++++.+++. +..+-+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~------------------------~v~~~l~G 118 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP------------------------SVWVRLLG 118 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc------------------------chhHHHHH
Confidence 33333444555667788889987 644445555567777777666543 34455667
Q ss_pred HHHHHHhCcccchhhhhhhhhccCC
Q 041538 147 FGLMSLGGGGIRSSSLAFGADQLEK 171 (225)
Q Consensus 147 ~~l~g~g~g~~~~~~~~~~~~~~p~ 171 (225)
..+.+++.|..=....++. ..|++
T Consensus 119 v~las~ssg~GE~tfL~lt-~~y~~ 142 (402)
T PF02487_consen 119 VVLASLSSGLGEVTFLSLT-HFYGK 142 (402)
T ss_pred HHHHhhhhhhhHHHHHHHH-HhcCc
Confidence 7777777666544444443 34554
No 287
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=42.28 E-value=1.6e+02 Score=25.81 Aligned_cols=78 Identities=19% Similarity=0.332 Sum_probs=54.2
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhcCCc-hhHHH----HHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHHHHHHHHHH
Q 041538 35 EAFERMASTGFMPNMILYLCREYNMK-ITEGT----NVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVL 109 (225)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~----~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~ 109 (225)
-.+...+..++-+++..+..+.+.-+ +.+.. +......++..++..+.+++.|++ |..-.+.+..+...++...
T Consensus 40 L~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 40 LALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHH
Confidence 33456677789999999999887754 33332 444555556666677788999997 9888888887777777766
Q ss_pred HHHh
Q 041538 110 LWLT 113 (225)
Q Consensus 110 l~~~ 113 (225)
+...
T Consensus 119 f~~~ 122 (372)
T PF00854_consen 119 FLSG 122 (372)
T ss_dssp HHCC
T ss_pred HHhC
Confidence 5553
No 288
>PRK11469 hypothetical protein; Provisional
Probab=41.72 E-value=1.8e+02 Score=23.32 Aligned_cols=52 Identities=17% Similarity=0.186 Sum_probs=28.1
Q ss_pred CCchhHHHHHHHHHHHHHH-HHHHHHHHHhHhhccchHHHHHHHHHHHHHHHHH
Q 041538 58 NMKITEGTNVLFFWSAASN-FLPILGAFLADSYVGRYAMIGFGCITCLLGMVLL 110 (225)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~-i~~~~~G~laDr~~Grr~~~~~~~~~~~i~~~~l 110 (225)
+.+.-.......+.+.... .+..++..+.+++ |||.-+.-+.++..+|.-++
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 3343334333333333333 3333455555565 88877777777777776544
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=40.63 E-value=2.4e+02 Score=24.25 Aligned_cols=28 Identities=14% Similarity=0.120 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhHhhccchHHHH
Q 041538 70 FWSAASNFLPILGAFLADSYVGRYAMIG 97 (225)
Q Consensus 70 ~~~~~~~i~~~~~G~laDr~~Grr~~~~ 97 (225)
++..+..+++...|.....-..||+-+.
T Consensus 149 ~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 3444455555666666655546666544
No 290
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=36.27 E-value=2e+02 Score=22.40 Aligned_cols=42 Identities=14% Similarity=-0.067 Sum_probs=27.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHH
Q 041538 57 YNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFG 99 (225)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (225)
.|+++........+..+.-.++-+++++++|+. ++-..+.+.
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L-~~~e~~~~~ 108 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYL-FFSELIVIF 108 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHH
Confidence 556655555555666666666777788888887 666654443
No 291
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=31.94 E-value=1.3e+02 Score=24.36 Aligned_cols=20 Identities=15% Similarity=0.044 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhHhh
Q 041538 70 FWSAASNFLPILGAFLADSY 89 (225)
Q Consensus 70 ~~~~~~~i~~~~~G~laDr~ 89 (225)
-+..+..+...+.|+++||.
T Consensus 90 GyL~gfi~aa~l~G~l~~k~ 109 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKI 109 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhh
Confidence 34556777889999999998
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=31.25 E-value=40 Score=29.36 Aligned_cols=118 Identities=11% Similarity=0.089 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhcc--chHH-HHHHHHHHHHHH
Q 041538 31 IIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVG--RYAM-IGFGCITCLLGM 107 (225)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G--rr~~-~~~~~~~~~i~~ 107 (225)
+.+..+..+.....-+.+++.|.+++++++.+....+-.+..+..+..+.+- +.-.+. |+|. ...+.+...++.
T Consensus 206 iAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~---~eipwngkrlKayYsaGgiiwifcg 282 (412)
T KOG4830|consen 206 IALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN---SEIPWNGKRLKAYYSAGGIIWIFCG 282 (412)
T ss_pred HHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc---ccCCcCcceeeeeeecccHHHHHhh
Confidence 4457777888777788999999999999988877766555444444433321 111122 3333 233334444333
Q ss_pred HHHHHhhhcCCCCCCccccccccccccccchhHHHHHHHHHHHHHhCcccchhhhhhhhhccCCCC
Q 041538 108 VLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGADQLEKGD 173 (225)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~~~ 173 (225)
..+.+.. ......++..-+..|+.++.......++-+++..++.
T Consensus 283 a~ilLlp----------------------r~i~symyAisvfIGIAnAimlvtslsitavli~~~~ 326 (412)
T KOG4830|consen 283 AVILLLP----------------------RGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNT 326 (412)
T ss_pred hheeecc----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3322221 0112234444556677777665555555556555544
No 293
>PRK11375 allantoin permease; Provisional
Probab=30.45 E-value=2e+02 Score=26.72 Aligned_cols=34 Identities=6% Similarity=-0.023 Sum_probs=23.5
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 041538 56 EYNMKITEGTNVLFFWSAASNFLPILGAFLADSY 89 (225)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~ 89 (225)
.+|++..|+-....+......+...+.|..+-|.
T Consensus 54 ~~GLs~~~ai~ai~lG~~i~~~~~~l~g~~G~~~ 87 (484)
T PRK11375 54 ILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKY 87 (484)
T ss_pred HccchHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3688888888777777766666666666665554
No 294
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.96 E-value=2.2e+02 Score=20.62 Aligned_cols=17 Identities=6% Similarity=-0.209 Sum_probs=9.1
Q ss_pred HHHHHHHhHhhccchHH
Q 041538 79 PILGAFLADSYVGRYAM 95 (225)
Q Consensus 79 ~~~~G~laDr~~Grr~~ 95 (225)
....|...|+.++-.+.
T Consensus 59 G~~lG~WLD~~~~t~~~ 75 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFS 75 (100)
T ss_pred HHHHHHHHHhhcCCCcH
Confidence 34445666665565443
No 295
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=28.52 E-value=2.4e+02 Score=20.65 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhcC
Q 041538 29 PFIIANEAFERMASTGFMPNMILYLCREYN 58 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~ 58 (225)
+..........++|.....++.+++.+.+.
T Consensus 52 ~Rt~~FIlicAFGYGll~v~~tP~l~~~L~ 81 (106)
T PF11872_consen 52 LRTLAFILICAFGYGLLIVWLTPLLARQLA 81 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555666676677777788876653
No 296
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=28.44 E-value=5.6e+02 Score=24.90 Aligned_cols=23 Identities=4% Similarity=-0.158 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhh
Q 041538 67 VLFFWSAASNFLPILGAFLADSY 89 (225)
Q Consensus 67 ~~~~~~~~~~i~~~~~G~laDr~ 89 (225)
...++.....+..+.....+|-.
T Consensus 25 A~~i~~~f~~l~yl~pilGg~iA 47 (654)
T TIGR00926 25 STVLFHTFTYLCYLTPLIGAIIA 47 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444443
No 297
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=25.67 E-value=5.2e+02 Score=23.61 Aligned_cols=31 Identities=6% Similarity=0.123 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHhCcccchhhhhhhhhccCC
Q 041538 140 LMLLYLAFGLMSLGGGGIRSSSLAFGADQLEK 171 (225)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~p~ 171 (225)
..+.++...+.+++.+..+....++.+ .+|+
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~ 136 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPS 136 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCH
Confidence 344555556677777777776666654 5665
No 298
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=24.75 E-value=1e+02 Score=27.81 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=34.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhcCCch
Q 041538 23 GGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKI 61 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~ 61 (225)
-.||+...++...+..+..++++.-|+..|.+.++..++
T Consensus 60 ~kWR~~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~ 98 (400)
T KOG3827|consen 60 LKWRWMLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDP 98 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 468888888889999999999999999999999887776
No 299
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=21.88 E-value=2.5e+02 Score=21.62 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhHhhccch
Q 041538 70 FWSAASNFLPILGAFLADSYVGRY 93 (225)
Q Consensus 70 ~~~~~~~i~~~~~G~laDr~~Grr 93 (225)
-+..+..+...+.|++.+|. .++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~-~~~ 83 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERL-KRS 83 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccc
Confidence 34556667788899999997 665
No 300
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.88 E-value=3.4e+02 Score=19.77 Aligned_cols=41 Identities=10% Similarity=-0.017 Sum_probs=25.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHHHHHHHH
Q 041538 58 NMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCI 101 (225)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (225)
++++....+ ...+...+..+++|+++-|..++|+.+.-...
T Consensus 33 ~~~e~~~~~---~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~ 73 (116)
T PF12670_consen 33 SLSESILPW---LVVIIYILSVFIGGFYAGRKAGSKGWLHGLLV 73 (116)
T ss_pred CCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 455554443 33455667778899999988555555554443
Done!