Your job contains 1 sequence.
>041545
MHWLEVQLSVAPVNLYASLFNGEICTCEQALGLLCETVKDLDMAKPKHKRRRELDPDSNS
RWFHLDDSAFESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNLC
LASVTNSISSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQN
ESNEDKTQRESLMASVLITLEAVIDKLGGFLNPYLGDITELLVLCPEYLPGSDPKLKVKA
DAVRRLLTDKIQVIVLIKMLVIDFDLKFLLFILHLVRLALPPLLKIYSGAVDAGDSSLVI
AFEILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVSIQDIDIVEKSVISTVISLT
MKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFK
YLLEGCVQHLTDAKGVNTANSTRKKKARIQEAGTIKEQNGSLSINHWQLRALVISSLHKC
FLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHLNVPTVKEVDDLLVVCIGQMAV
TAGTDLLWKPLNHE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041545
(554 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0285875 - symbol:DDB_G0285875 "BP28, C-ter... 158 1.7e-24 4
UNIPROTKB|Q5T3Q7 - symbol:HEATR1 "HEAT repeat-containing ... 138 1.7e-15 3
ZFIN|ZDB-GENE-030131-6378 - symbol:heatr1 "HEAT repeat co... 212 1.7e-15 2
UNIPROTKB|Q9H583 - symbol:HEATR1 "HEAT repeat-containing ... 138 1.9e-15 3
FB|FBgn0086451 - symbol:l(2)k09022 "lethal (2) k09022" sp... 120 8.3e-11 3
SGD|S000003645 - symbol:UTP10 "Nucleolar protein" species... 144 2.9e-08 3
UNIPROTKB|E2R476 - symbol:HEATR1 "Uncharacterized protein... 140 1.6e-07 2
POMBASE|SPBC23E6.04c - symbol:utp10 "U3 snoRNP-associated... 162 1.9e-07 2
UNIPROTKB|F1RHL7 - symbol:HEATR1 "Uncharacterized protein... 135 2.2e-07 2
RGD|1564769 - symbol:Heatr1 "HEAT repeat containing 1" sp... 134 1.1e-06 2
UNIPROTKB|F1MDU9 - symbol:HEATR1 "Uncharacterized protein... 137 1.4e-06 2
CGD|CAL0003770 - symbol:orf19.7215 species:5476 "Candida ... 129 7.0e-06 2
>DICTYBASE|DDB_G0285875 [details] [associations]
symbol:DDB_G0285875 "BP28, C-terminal
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA;ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR016024 dictyBase:DDB_G0285875
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000153_GR GO:GO:0030515
EMBL:AAFI02000082 GO:GO:0006364 GO:GO:0005732 eggNOG:NOG116525
KO:K14550 InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146
Pfam:PF12397 SMART:SM01036 RefSeq:XP_637976.1
ProteinModelPortal:Q54ML4 EnsemblProtists:DDB0237545 GeneID:8625328
KEGG:ddi:DDB_G0285875 OMA:YHESNIF ProtClustDB:CLSZ2728903
Uniprot:Q54ML4
Length = 2237
Score = 158 (60.7 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 35/110 (31%), Positives = 63/110 (57%)
Query: 287 YSGAVDA-GDSSLVIAFEILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVSIQDI 345
Y AV + D SL+ F+ +G+I + + I H IF L + R++++ +++
Sbjct: 1820 YEFAVQSENDLSLICLFDFVGDISANLGPKDIALHHKSIFKFYLQCFEFRKKYKNRVKNA 1879
Query: 346 DIVEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSID 395
D VE +IS+ ++L MKL E +F+PLFI+ ++WA ++++ G K D
Sbjct: 1880 DKVEDHIISSFMTLVMKLNENLFKPLFIKVLDWA-LNIQN-GQQNGKHTD 1927
Score = 134 (52.2 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 44/125 (35%), Positives = 58/125 (46%)
Query: 437 NTANSTRKKKARIQEAGTIKEQ-NGSL--SINH-----WQLRALVISSLHKCFLYDTASL 488
N N+ RKK I T N +L S N+ + VIS+L KCF+YDT
Sbjct: 2042 NNINNKRKKNQNITNTTTTNNNSNNNLNNSNNNNIDQDESILCFVISALEKCFMYDTDG- 2100
Query: 489 KFLDSTNFQVLLKPIVSQLAAEPPAGLEEHLNVPTVKEVDDLLVVCIGQMAVTAGTDLLW 548
FLD F+ +L +V+QL + G E + V + I Q+AV DLLW
Sbjct: 2101 -FLDKQKFEQILPALVNQL--DNQMGTVESYKL----RVSRYIAPTITQLAVVINQDLLW 2153
Query: 549 KPLNH 553
K LNH
Sbjct: 2154 KHLNH 2158
Score = 92 (37.4 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 45/196 (22%), Positives = 84/196 (42%)
Query: 65 LDDSAFESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNLC-LAS 123
L F + ++D S E+ + K T++ + E+LA F++ ++ L +
Sbjct: 1626 LTQDQVNQFLSLIDSFTRIID-SQNETETN-KQTSLLSFEILARNFSTTNATAFLSQIPI 1683
Query: 124 VTNSISSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESN 183
+ S+ + + SS L L L K + +P V + S +V+ E N
Sbjct: 1684 IIKSMGHSSHQVVSSSLICIATLCCELQAKTIPYIPQFFP-VLLNTLTGSYKTNVEEE-N 1741
Query: 184 EDKTQRESLMASVLITLEAVIDKLGGFLNPYLGDITELLVLCPEYLPGS--DPKLKVKAD 241
E +T L S + +LE +++ + FL+PYL + L L P S KL +
Sbjct: 1742 ETRTL---LQISCISSLEMMLNTISKFLSPYLPQLLNAL-LHPRLTSNSMLSGKLFAQVK 1797
Query: 242 AVRRLLTDKIQVIVLI 257
+ +LT ++ +L+
Sbjct: 1798 RLLNILTKNVEFRLLL 1813
Score = 86 (35.3 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 393 SIDRAIVFYSLVNKLAESHRSLFVPYFKYLLEGCVQHL 430
S D + FY +VN LA + +++FVPYF Y + ++ L
Sbjct: 1965 SKDNLLFFYKIVNSLASNLKTIFVPYFGYFFDDSIRQL 2002
Score = 44 (20.5 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 73 FRKMCSEVVLLVDNSTGES--NISLKLTAVSTLEVLANRFASYDSVFNLCLASVTNSISS 130
++ +C +L+ S N + + + L +L N+ +S S + + I S
Sbjct: 836 YQSLCLSGILVNSKSFNRYLINNNQAVALIPYLLLLKNQDSSIRSTSLDSIQEIYKQIKS 895
Query: 131 RNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRE 190
++ +SS TT +N + P I V K ++ V +NE DKT +
Sbjct: 896 SSIEASSST--TTSNRLNFY----TSNQPTIELKVLIKF--LAQLVQYKNEITMDKTFLD 947
Query: 191 SLMASVL 197
S + VL
Sbjct: 948 SYFSKVL 954
Score = 41 (19.5 bits), Expect = 2.6e-19, Sum P(4) = 2.6e-19
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 74 RKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNLCLASVTNSI 128
R C ++ L DNS + + + +++ N+F S + L L+S S+
Sbjct: 60 RFKCFQLTLFSDNSKSFNRVLENKEENNKIDIEINKFLELQSNYFL-LSSAHKSL 113
Score = 41 (19.5 bits), Expect = 2.6e-19, Sum P(4) = 2.6e-19
Identities = 38/154 (24%), Positives = 69/154 (44%)
Query: 66 DDSAF-ESFRKMCSEVVLLVDNST---GESNI-SLKLTAVSTLEVLANRFASYDSVFNLC 120
DD F E S+++ V N+T ES I + L + VL N S+ +L
Sbjct: 1023 DDVTFVEVTINYISQLLENVKNATLTYDESLILDILLKRLGQTSVLTNPKTKKQSL-SLF 1081
Query: 121 LASVTNSISSR-NLALASSC----LRTTG--ALVNVLGLKALAELPLIMENVRKKSREIS 173
++S+ SIS+ +L +A ++ T AL+ + L +P + E + +S
Sbjct: 1082 ISSL--SISNELDLTIAGGGNDKPIKYTPLVALIGSINKSLLLTVP-VKEQIGIVETVLS 1138
Query: 174 TYVDVQNESNEDKTQRESLMASVLITLEAVIDKL 207
+ +ESN+ K ++ + SVL+ ++ L
Sbjct: 1139 YFF---SESNQIKQLAKNTLLSVLVDATVILPML 1169
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 339 RVSIQDIDIVEKSVISTVI---SLTMKLT 364
+++ QDI+++ K +IS+ + SL+ +LT
Sbjct: 985 KMTKQDIELIGKFLISSSLLIESLSSRLT 1013
Score = 39 (18.8 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 346 DIVEKSVISTVISLTMKLTETMFRPL 371
D V++SVI+ + SL ++ + F+ L
Sbjct: 390 DEVDESVINILRSLNSEVVQDEFKKL 415
>UNIPROTKB|Q5T3Q7 [details] [associations]
symbol:HEATR1 "HEAT repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR016024 GO:GO:0005739 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL359921
InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397
SMART:SM01036 HOGENOM:HOG000007886 HOVERGEN:HBG050660
UniGene:Hs.708114 HGNC:HGNC:25517 ChiTaRS:HEATR1 IPI:IPI00641437
Ensembl:ENST00000366581 UCSC:uc009xgh.2 Uniprot:Q5T3Q7
Length = 2063
Score = 138 (53.6 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
IL I M + + ++ L ALD R QH + ++++ E +I ++++ +K
Sbjct: 1766 ILQEHIGVMKKEELTSHQSQLTAFFLEALDFRAQHSENDLEEVGKTENCIIDCLVAMVVK 1825
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY+L + +AE + LF + +L
Sbjct: 1826 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYNLADCIAEKLKGLFTLFAGHL 1877
Query: 423 LE 424
++
Sbjct: 1878 VK 1879
Score = 118 (46.6 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 469 LRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHLNVPTVKEVD 528
L +++ L+K FL+DT F+ + L+ P+V QL E G EE K
Sbjct: 1910 LLQFILNCLYKIFLFDTQH--FISKERAEALMMPLVDQL--ENRLGGEEKFQERVTKH-- 1963
Query: 529 DLLVVCIGQMAVTAGTDLLWKPLNHE 554
L+ CI Q +V D LWKPLN++
Sbjct: 1964 --LIPCIAQFSVAMADDSLWKPLNYQ 1987
Score = 81 (33.6 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 45/220 (20%), Positives = 96/220 (43%)
Query: 50 RRRELDPDSNSRWFHLD--DSAFESFRKMCSEVVLLVDNST--GESNISL-KLTAVSTLE 104
RR+ LD +N ++ + F K+ +++ +V GE ++ + TA+ TL+
Sbjct: 1535 RRKALDLLNNKLQQNISWKKTIVTRFLKLVPDLLAIVQRKKKEGEEEQAINRQTALYTLK 1594
Query: 105 VLANRFAS-----YDSVFNLCLASVTNSISSRNLALASSCLRTTGALVNVLGLKALAELP 159
+L F + + V N + + L S+ L + + L A+ +LP
Sbjct: 1595 LLCKNFGAENPDPFVPVLNTAVKLIAPERKEEKNVLGSALL-CIAEVTSTLEALAIPQLP 1653
Query: 160 LIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAVIDKLGGFLNPYLGDIT 219
+M ++ ++T ++N S + E + S L L+ V++ L F++PYL I
Sbjct: 1654 SLMPSL------LTT---MKNTS--ELVSSEVYLLSALAALQKVVETLPHFISPYLEGIL 1702
Query: 220 ELLVLCPEYLP--GSDPKLKVKADAVRRLLTDKIQVIVLI 257
++ + GS + ++ ++++ L + VL+
Sbjct: 1703 SQVIHLEKITSEMGSASQANIRLTSLKKTLATTLAPRVLL 1742
Score = 59 (25.8 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 71 ESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNL 119
ESF K E VL G+ NI + L+A+S E+ F+S ++ NL
Sbjct: 515 ESFIK---EAVLA---RLGDDNIDVVLSAISAFEIFKEHFSSEVTISNL 557
Score = 37 (18.1 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 191 SLMASVLITLEAVIDKLGGFLNPYL 215
S + S L+ E V D + L PY+
Sbjct: 222 STIVSALVAAEDVSDNIIAKLFPYI 246
>ZFIN|ZDB-GENE-030131-6378 [details] [associations]
symbol:heatr1 "HEAT repeat containing 1"
species:7955 "Danio rerio" [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043487 "regulation of RNA stability"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR016024
ZFIN:ZDB-GENE-030131-6378 GO:GO:0043066 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077
GO:GO:0030529 GO:GO:0000462 KO:K14550 InterPro:IPR012954
InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397 SMART:SM01036
EMBL:BC055128 IPI:IPI00492652 RefSeq:NP_956194.1 UniGene:Dr.150767
ProteinModelPortal:Q7SY48 PRIDE:Q7SY48 GeneID:334446
KEGG:dre:334446 CTD:55127 eggNOG:NOG310500 HOGENOM:HOG000007886
HOVERGEN:HBG050660 InParanoid:Q7SY48 OrthoDB:EOG4TMR15
NextBio:20810405 GO:GO:0043487 Uniprot:Q7SY48
Length = 2159
Score = 212 (79.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 70/235 (29%), Positives = 109/235 (46%)
Query: 285 KIYSGAVDAGDSSLVIAFEILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQH-RVSIQ 343
K Y VDA + L IL IS MD+ + ++ L ALD R QH + ++
Sbjct: 1831 KCYCSMVDAQQNRLSPLMNILKEHISHMDKDQLNNHQSELTSFFLSALDFRAQHCQGDLK 1890
Query: 344 DIDIVEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSL 403
+E VI ++ + MKL+E FRPLF + +W++ D G+ K DR + FY L
Sbjct: 1891 KTAEIEGCVIDCLLVMIMKLSEVTFRPLFFKLFDWSKID----GASK----DRLLTFYRL 1942
Query: 404 VNKLAESHRSLFVPYFKYLLEGCVQHLTDAKGVNTANSTRKKKARIQEAGTIKEQNGSLS 463
+++A+ + LFV + L++ L +N +++ + E+ ++ +
Sbjct: 1943 ADRIADKLKGLFVLFAGQLVKPFSDLLHQ---LNISHTDKAFFDSEDESDDDSDEEADDN 1999
Query: 464 INHWQLRA-LVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEE 517
+ L V+ LHK FLYDT FL LL P+V QL E G EE
Sbjct: 2000 VTKSSLLLQYVLDCLHKIFLYDTQH--FLSKERADALLCPLVDQL--ENMLGGEE 2050
Score = 135 (52.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 51/172 (29%), Positives = 76/172 (44%)
Query: 385 DIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYLLEGCVQHLTDAKGVNTANSTRK 444
D + S DR + FY L +++A+ + LFV + L++ L +N +++ +
Sbjct: 1924 DWSKIDGASKDRLLTFYRLADRIADKLKGLFVLFAGQLVKPFSDLLHQ---LNISHTDKA 1980
Query: 445 KKARIQEAGTIKEQNGSLSINHWQLRA-LVISSLHKCFLYDTASLKFLDSTNFQVLLKPI 503
E+ ++ ++ L V+ LHK FLYDT FL LL P+
Sbjct: 1981 FFDSEDESDDDSDEEADDNVTKSSLLLQYVLDCLHKIFLYDTQH--FLSKERADALLCPL 2038
Query: 504 VSQLAAEPPAGLEEHLNVPTVKE-VDDLLVVCIGQMAVTAGTDLLWKPLNHE 554
V QL E G EE T K + LV CI Q AV D WK LN++
Sbjct: 2039 VDQL--ENMLGGEE-----TYKSRITTHLVPCIAQFAVAMRDDSQWKVLNYQ 2083
Score = 74 (31.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 90 ESNISL-KLTAVSTLEVLANRFAS-----YDSVFNLCLASVTNSISSRNLALASSCLRTT 143
E +++ + TA+ +L++L F S + V N + V + +N+ S L
Sbjct: 1664 EEELAINRQTALYSLKLLCRNFGSDHKEEFVPVLNKAVELVADKDEEKNVM--GSALLCV 1721
Query: 144 GALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAV 203
+ + L KALA +P + R + +D E +D E + S + L+
Sbjct: 1722 AEVTSTL--KALA-IPQL-------HRLMPAVLDTLKE-RKDLLNNEIYLLSAVTALQRA 1770
Query: 204 IDKLGGFLNPYLGD----ITELLVLCPEYLPGSDPKLKVKADAVRRLLTDKIQVIVLI 257
+ L F++PYL D +T L +L S P+L V+ ++ L K+ VLI
Sbjct: 1771 SETLPHFISPYLLDTILQVTRLTLLARRLT--SCPQLSVRLASLSSTLATKLPPRVLI 1826
>UNIPROTKB|Q9H583 [details] [associations]
symbol:HEATR1 "HEAT repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR016024 GO:GO:0005739
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0030529 EMBL:AL359921 GO:GO:0006364
eggNOG:NOG116525 KO:K14550 InterPro:IPR012954 InterPro:IPR022125
Pfam:PF08146 Pfam:PF12397 SMART:SM01036 CTD:55127
HOGENOM:HOG000007886 HOVERGEN:HBG050660 OrthoDB:EOG4TMR15
OMA:CQKTIQQ EMBL:AX067150 EMBL:BC065205 EMBL:AK001221
IPI:IPI00024279 RefSeq:NP_060542.4 UniGene:Hs.708114
ProteinModelPortal:Q9H583 SMR:Q9H583 IntAct:Q9H583
PhosphoSite:Q9H583 DMDM:71153494 SWISS-2DPAGE:Q9H583 PaxDb:Q9H583
PRIDE:Q9H583 Ensembl:ENST00000366582 GeneID:55127 KEGG:hsa:55127
UCSC:uc001hyd.2 GeneCards:GC01M236712 H-InvDB:HIX0001726
HGNC:HGNC:25517 HPA:HPA046917 neXtProt:NX_Q9H583
PharmGKB:PA142671697 InParanoid:Q9H583 PhylomeDB:Q9H583
ChiTaRS:HEATR1 GenomeRNAi:55127 NextBio:58786 ArrayExpress:Q9H583
Bgee:Q9H583 CleanEx:HS_HEATR1 Genevestigator:Q9H583
GermOnline:ENSG00000119285 Uniprot:Q9H583
Length = 2144
Score = 138 (53.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
IL I M + + ++ L ALD R QH + ++++ E +I ++++ +K
Sbjct: 1847 ILQEHIGVMKKEELTSHQSQLTAFFLEALDFRAQHSENDLEEVGKTENCIIDCLVAMVVK 1906
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY+L + +AE + LF + +L
Sbjct: 1907 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYNLADCIAEKLKGLFTLFAGHL 1958
Query: 423 LE 424
++
Sbjct: 1959 VK 1960
Score = 118 (46.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 469 LRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHLNVPTVKEVD 528
L +++ L+K FL+DT F+ + L+ P+V QL E G EE K
Sbjct: 1991 LLQFILNCLYKIFLFDTQH--FISKERAEALMMPLVDQL--ENRLGGEEKFQERVTKH-- 2044
Query: 529 DLLVVCIGQMAVTAGTDLLWKPLNHE 554
L+ CI Q +V D LWKPLN++
Sbjct: 2045 --LIPCIAQFSVAMADDSLWKPLNYQ 2068
Score = 81 (33.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 45/220 (20%), Positives = 96/220 (43%)
Query: 50 RRRELDPDSNSRWFHLD--DSAFESFRKMCSEVVLLVDNST--GESNISL-KLTAVSTLE 104
RR+ LD +N ++ + F K+ +++ +V GE ++ + TA+ TL+
Sbjct: 1616 RRKALDLLNNKLQQNISWKKTIVTRFLKLVPDLLAIVQRKKKEGEEEQAINRQTALYTLK 1675
Query: 105 VLANRFAS-----YDSVFNLCLASVTNSISSRNLALASSCLRTTGALVNVLGLKALAELP 159
+L F + + V N + + L S+ L + + L A+ +LP
Sbjct: 1676 LLCKNFGAENPDPFVPVLNTAVKLIAPERKEEKNVLGSALL-CIAEVTSTLEALAIPQLP 1734
Query: 160 LIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAVIDKLGGFLNPYLGDIT 219
+M ++ ++T ++N S + E + S L L+ V++ L F++PYL I
Sbjct: 1735 SLMPSL------LTT---MKNTS--ELVSSEVYLLSALAALQKVVETLPHFISPYLEGIL 1783
Query: 220 ELLVLCPEYLP--GSDPKLKVKADAVRRLLTDKIQVIVLI 257
++ + GS + ++ ++++ L + VL+
Sbjct: 1784 SQVIHLEKITSEMGSASQANIRLTSLKKTLATTLAPRVLL 1823
Score = 59 (25.8 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 71 ESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNL 119
ESF K E VL G+ NI + L+A+S E+ F+S ++ NL
Sbjct: 515 ESFIK---EAVLA---RLGDDNIDVVLSAISAFEIFKEHFSSEVTISNL 557
Score = 37 (18.1 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 191 SLMASVLITLEAVIDKLGGFLNPYL 215
S + S L+ E V D + L PY+
Sbjct: 222 STIVSALVAAEDVSDNIIAKLFPYI 246
>FB|FBgn0086451 [details] [associations]
symbol:l(2)k09022 "lethal (2) k09022" species:7227
"Drosophila melanogaster" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR016024
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 EMBL:AE014134 GO:GO:0022008 GO:GO:0030529
GO:GO:0006364 eggNOG:NOG116525 GeneTree:ENSGT00390000015845
KO:K14550 InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146
Pfam:PF12397 SMART:SM01036 EMBL:BT015178 EMBL:AY069800
RefSeq:NP_609079.2 UniGene:Dm.334 ProteinModelPortal:Q9VM75
SMR:Q9VM75 DIP:DIP-18874N IntAct:Q9VM75 MINT:MINT-962747
STRING:Q9VM75 PaxDb:Q9VM75 EnsemblMetazoa:FBtr0079343 GeneID:33960
KEGG:dme:Dmel_CG10805 FlyBase:FBgn0086451 InParanoid:Q9VM75
OMA:CQKTIQQ OrthoDB:EOG4QV9SS PhylomeDB:Q9VM75 GenomeRNAi:33960
NextBio:786147 Bgee:Q9VM75 GermOnline:CG10805 Uniprot:Q9VM75
Length = 2096
Score = 120 (47.3 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 34/111 (30%), Positives = 61/111 (54%)
Query: 329 LLALDLRRQHR-VSIQD--IDIVEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVED 385
L AL+ R Q R + +Q + VE S+ T ++ +KL+ET FRP++ R +WA
Sbjct: 1831 LQALNFRLQVRGLGLQRQLVSDVEASITETFVTWILKLSETSFRPMYSRVHKWA------ 1884
Query: 386 IGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYLLEGCVQHLTDAKGV 436
++S S + + ++ L N++AE+ +SLFV + +E + LT+ +
Sbjct: 1885 ---LESTSRETRLTYFLLTNRIAEALKSLFVLFASDFVEDSSRLLTEHNSI 1932
Score = 99 (39.9 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 473 VISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHLNVPTVKEVDDLLV 532
++++LH FLY S F++ F VL+ P+V+QL + G E + +L
Sbjct: 1951 ILNTLHHVFLY--CSEDFINDHRFNVLMPPLVNQLENDLVLGNES---------LQQVLS 1999
Query: 533 VCIGQMAVTAGTDLLWKPLNHE 554
CI Q AV A D++WK LN +
Sbjct: 2000 NCIAQFAV-ATNDVMWKQLNSQ 2020
Score = 73 (30.8 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 38 VKDLDMAKPKHKRRRELDPDSNSRWFHLDDSAFESFRKMCSEVVLLVDNSTGESNISLKL 97
+K +D+ K + SN+ F + F +++ + + L +S L+
Sbjct: 1561 IKVMDLLVTKLSPSSDYFQQSNAEHFGV---LFAPLQEIINGI--LEGSSNSAQQAKLQQ 1615
Query: 98 TAVSTLEVLANRFA-SYDSVFNLCLASVTNSISSR-NL--ALASSCLRTTGALVNVLGLK 153
TA+ L++LA R Y LA++T R N+ A+ + + T + L
Sbjct: 1616 TALHALQLLALRHGRDYIEECRSLLATLTKITKRRANVPKAVVGNVVLTLVEICASLKAH 1675
Query: 154 ALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLIT-LEAVIDKLGGFLN 212
ALA+LP K + +++ + Q Q + S L+T L + L FL
Sbjct: 1676 ALAQLP-------KFAPQLTELLKEQVHQMASLKQGPDYVCSTLVTALHKLFKALPLFLG 1728
Query: 213 PYLGDI 218
PYL DI
Sbjct: 1729 PYLVDI 1734
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 77 CSEV-VLLVDNSTGESNISLKLTAVSTLEVLANR 109
C V VL V N+ G +L++ A++ L++++NR
Sbjct: 876 CGLVHVLRVANACGSPLQTLRVQAINILQLISNR 909
Score = 45 (20.9 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 75 KMCSEVVLLVDNSTGE---SNISLKLTAVSTLEVLANRFASYDSVFNLC----LASVTNS 127
K+C+ ++ V N E S L L + + A +++ NL L S +S
Sbjct: 275 KVCNALLERVANCPFERLHSESLLLLVCIYGKQQAALPHFKPETILNLVGKKWLISTLSS 334
Query: 128 ISSRNLALASSCLRT-TGALVNV 149
++ N+A+ S C+ TGA+ +
Sbjct: 335 LAKGNIAIQSICMPLMTGAVAAI 357
>SGD|S000003645 [details] [associations]
symbol:UTP10 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030686 "90S preribosome" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030515 "snoRNA binding"
evidence=IPI] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0034455 "t-UTP
complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0030688 "preribosome, small subunit precursor" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR016024 SGD:S000003645 GO:GO:0016021 GO:GO:0005739
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:BK006943 GO:GO:0030515
GO:GO:0006351 GO:GO:0033553 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 EMBL:X85021 GO:GO:0045943 GO:GO:0000480 GO:GO:0030688
eggNOG:NOG116525 GeneTree:ENSGT00390000015845 KO:K14550
InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397
SMART:SM01036 OMA:VLHSVMP GO:GO:0034455 EMBL:Z49384 PIR:S53378
RefSeq:NP_012426.1 ProteinModelPortal:P42945 DIP:DIP-6466N
IntAct:P42945 MINT:MINT-671263 STRING:P42945 PaxDb:P42945
PeptideAtlas:P42945 EnsemblFungi:YJL109C GeneID:853335
KEGG:sce:YJL109C CYGD:YJL109c HOGENOM:HOG000093519
OrthoDB:EOG4C5GSH NextBio:973709 Genevestigator:P42945
GermOnline:YJL109C Uniprot:P42945
Length = 1769
Score = 144 (55.7 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 285 KIYSGAVDAGDSSLVIAFEI--LGNIISRMDRSSIGGFHGKIFDQCLLAL-DLRRQHRVS 341
+I+S + + ++ ++ + L + + +D+ S IF + LL+L + R
Sbjct: 1459 RIWSTEIATSNDTVAVSLFLSTLESTVENIDKKSATS-QSPIFFKLLLSLFEFRSISSFD 1517
Query: 342 IQDIDIVEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFY 401
I +E SV S +K+ + +FRPLF+ + WA D E + + +R + F+
Sbjct: 1518 NNTISRIEASVHEISNSYVLKMNDKVFRPLFVILVRWA-FDGEGVTNAGITETERLLAFF 1576
Query: 402 SLVNKLAESHRSLFVPYFKYLLE 424
NKL E+ R + YF YLLE
Sbjct: 1577 KFFNKLQENLRGIITSYFTYLLE 1599
Score = 74 (31.1 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 63 FHLDDSAFESFRKMCSEVVLLVDNSTGES-NISLKLTAVSTLEVLANRFASY--DSVFNL 119
F L+ S E+ + + + +L+D ES ++ + ++T+ L +++ S+
Sbjct: 1274 FELEGS--EAIPIVNNVMKVLLDRMPLESKSVVISQVILNTMTALVSKYGKKLEGSILTQ 1331
Query: 120 CLASVTNSISSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTY-VDV 178
L T +SS + S L V VLG+K++A P I+ I + +
Sbjct: 1332 ALTLATEKVSSDMTEVKISSLALITNCVQVLGVKSIAFYPKIVPP------SIKLFDASL 1385
Query: 179 QNESNEDKTQRESLMASVLITLEAVIDKLGGFLNPYLGDITELLVLCPE 227
+ SN K E L ++L+ +I ++ FL + D+ ++ E
Sbjct: 1386 ADSSNPLK---EQLQVAILLLFAGLIKRIPSFLMSNILDVLHVIYFSRE 1431
Score = 45 (20.9 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 461 SLSINHWQLRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLA 508
S + + LR LVI+SL +D + ++ F+++ +V+QL+
Sbjct: 1610 SKDMENVNLRRLVINSLTSSLKFDRDEY-WKSTSRFELISVSLVNQLS 1656
Score = 43 (20.2 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 19/97 (19%), Positives = 44/97 (45%)
Query: 446 KARIQEAGTIKEQNGSLSINHWQLRALVISSLH-KCF----LYDTASLKFLDST---NFQ 497
K ++ G + N + ++ L L++ + C L+ ++K + S ++
Sbjct: 1664 KYLVKAIGALASNNSGVDEHNQILNKLIVEHMKASCSSNEKLWAIRAMKLIYSKIGESWL 1723
Query: 498 VLLK---PIVSQLAAEPPAGLEEHLNVPTVKEVDDLL 531
VLL P++++L + +E + VK V+++L
Sbjct: 1724 VLLPQLVPVIAELLEDDDEEIEREVRTGLVKVVENVL 1760
>UNIPROTKB|E2R476 [details] [associations]
symbol:HEATR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR016024
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GeneTree:ENSGT00390000015845 KO:K14550 InterPro:IPR012954
InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397 SMART:SM01036
CTD:55127 OMA:CQKTIQQ EMBL:AAEX03002675 RefSeq:XP_536334.2
UniGene:Cfa.18805 Ensembl:ENSCAFT00000017410 GeneID:479192
KEGG:cfa:479192 NextBio:20854407 Uniprot:E2R476
Length = 2141
Score = 140 (54.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
IL I M + + ++ L ALD R QH S +++I E +I ++++ +K
Sbjct: 1844 ILQEHIGIMKKEELTSHQSQLTIFFLEALDFRAQHSESDLEEIGKTENFIIDCLVAMVVK 1903
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY+L + +AE + LF + +L
Sbjct: 1904 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYNLADCIAEKLKGLFTLFAGHL 1955
Query: 423 LE 424
++
Sbjct: 1956 VK 1957
Score = 122 (48.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 65/234 (27%), Positives = 106/234 (45%)
Query: 343 QDIDIVEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYS 402
+ I I++K +++ S +LT L R+ + +ESD+E+IG ++ ID + +
Sbjct: 1847 EHIGIMKKEELTSHQS---QLTIFFLEALDFRA-QHSESDLEEIGKTENFIIDCLV---A 1899
Query: 403 LVNKLAE-SHRSLFVPYFKYL-LEGCVQ-------HLTDA-----KGVNT--ANSTRKKK 446
+V KL+E + R LF F + E + +L D KG+ T A K
Sbjct: 1900 MVVKLSEVTFRPLFFKLFDWAKTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPF 1959
Query: 447 ARIQEAGTIKEQNGSL--SINHWQ----LRALVISSLHKCFLYDTASLKFLDSTNFQVLL 500
A I + + + S N + L +++ L+K FL+DT F+ + L+
Sbjct: 1960 ADTLNQVNISKTDEAFFDSDNDPEKCCLLLQFILNCLYKIFLFDTQH--FISKERAEALM 2017
Query: 501 KPIVSQLAAEPPAGLEEHLNVPTVKEVDDLLVVCIGQMAVTAGTDLLWKPLNHE 554
P+V QL E G + H K L+ CI Q +V D LWKPLN++
Sbjct: 2018 MPLVDQL--ENRLGGDAHFQERVTKH----LIPCIAQFSVAVADDSLWKPLNYQ 2065
Score = 72 (30.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/193 (19%), Positives = 78/193 (40%)
Query: 73 FRKMCSEVVLLVDNSTG-ESNISLKLTAVSTLEVLANRFAS-----YDSVFNLCLASVTN 126
F K+ ++ +V + E + TA+ TL++L F + + V N + +
Sbjct: 1640 FLKLVPVLLAIVQHKKMVEEQAINRQTALYTLKLLCKNFGAENPGHFVPVLNAAVKLIAP 1699
Query: 127 SISSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDK 186
L S+ L + + L A+ +LP +M ++ + + S +
Sbjct: 1700 ETKEEKNVLGSALL-CVAEVASTLEALAIPQLPSLMPSLLTRMKNTSELLS--------- 1749
Query: 187 TQRESLMASVLITLEAVIDKLGGFLNPYLGDITELLVLCPEYLP--GSDPKLKVKADAVR 244
E + S L L V++ L F++PYL + +V + GS + V+ +++
Sbjct: 1750 --GEVYLLSALAALHKVVETLPHFISPYLEGVLSQVVHLEKITSEMGSASQANVRVTSLK 1807
Query: 245 RLLTDKIQVIVLI 257
+ L + VL+
Sbjct: 1808 KTLATTLSPRVLL 1820
Score = 49 (22.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 66 DDSAFESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNL 119
+++ ESF K E VL G+ +I + L+A++ ++ F+S +V NL
Sbjct: 510 EENVDESFIK---EAVL---TRLGDDSIDVVLSAMNAFKIFRQHFSSEVTVSNL 557
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 153 KALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAVIDKLGGFLN 212
K L + I V K + + Y + T S + S ++T E +D + L
Sbjct: 184 KDLGFMDFICSLVTKSVKIFTEYPGSSAQLRVLLTFYASTIVSAIVTAEDKLDNIVAKLF 243
Query: 213 PYL 215
PY+
Sbjct: 244 PYI 246
>POMBASE|SPBC23E6.04c [details] [associations]
symbol:utp10 "U3 snoRNP-associated protein Utp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0030490
"maturation of SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISO] [GO:0032040 "small-subunit processome" evidence=ISO]
[GO:0034455 "t-UTP complex" evidence=ISO] [GO:0044732 "mitotic
spindle pole body" evidence=IDA] InterPro:IPR016024
PomBase:SPBC23E6.04c SUPFAM:SSF48371 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0044732 EMBL:CU329671 GO:GO:0030515
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0032040 GO:GO:0030490
eggNOG:NOG116525 KO:K14550 InterPro:IPR012954 InterPro:IPR022125
Pfam:PF08146 Pfam:PF12397 SMART:SM01036 OMA:VLHSVMP
OrthoDB:EOG437VPB PIR:T39938 RefSeq:NP_596604.1
ProteinModelPortal:O60179 EnsemblFungi:SPBC23E6.04c.1
GeneID:2540284 KEGG:spo:SPBC23E6.04c NextBio:20801414 GO:GO:0034455
Uniprot:O60179
Length = 1649
Score = 162 (62.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 294 GDSSLVIAFEILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVSIQDIDIVEKSVI 353
G ++ + E++ + RS+IG + IF L + D RR + +D+D VE +
Sbjct: 1357 GSTAALRLLELIELALQNSSRSAIGTVYKSIFKFFLDSFDSRRS-LLFAEDVDNVETQAV 1415
Query: 354 STVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRS 413
+ + MKL++T FRPLF+ WA D+ + S + R FY+ + ++ +S
Sbjct: 1416 NVFLKFVMKLSDTTFRPLFLHLHSWALEDLYETDP--SGIVSRQTFFYNFLTIFLDTLKS 1473
Query: 414 LFVPYFKYLLEGCVQHLTDAKGVNT 438
+ Y+ Y+L+ ++ L +K N+
Sbjct: 1474 IVTNYYAYVLDDTIE-LLSSKDTNS 1497
Score = 46 (21.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 75 KMCSEVVLLVDNSTGESNISLKLT---AVSTLEVLANRFASYDSVFNLCLASVTNSISSR 131
K+ + L+ D + SN S + T A+ L V+A RF++ +F + V+ +
Sbjct: 1172 KVSALTALIPDVTYNISNYSDEETTQLAMDCLAVMAKRFSASPELFISPIEVVSGPYGLK 1231
Query: 132 NLA--LASSCLRTTGALVNVLGLKALAEL 158
N A + S + L N L + L L
Sbjct: 1232 NSARDVQVSAIVCITVLTNTLAARILPYL 1260
Score = 42 (19.8 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 186 KTQRESLMASVLITLEAVIDKLGGFLNPYLGDI 218
K + S ++ + + + L + PYL DI
Sbjct: 1231 KNSARDVQVSAIVCITVLTNTLAARILPYLADI 1263
Score = 42 (19.8 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 78 SEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNLCLASVTNSISSRNLALAS 137
+E +LL ++ + LT V + V A+R S + CL S+ +S + A
Sbjct: 984 AEKMLLAKSTNVVAIHDFCLTLVQSFSV-ADRIGSINQCSRFCLKSLEEQSNSDSNGKAV 1042
Query: 138 SCLR 141
S ++
Sbjct: 1043 SLIK 1046
>UNIPROTKB|F1RHL7 [details] [associations]
symbol:HEATR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GeneTree:ENSGT00390000015845
InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397
SMART:SM01036 OMA:CQKTIQQ EMBL:CU406971 Ensembl:ENSSSCT00000011107
Uniprot:F1RHL7
Length = 2149
Score = 135 (52.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
+L + M + + ++ L ALD R QH S ++++ E +I ++++ +K
Sbjct: 1852 VLREHVGVMKKEELASHQPQLTAFFLEALDFRAQHAESDLEEVGRTEDYIIDCLVAMVVK 1911
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY L + +AE + LF + +L
Sbjct: 1912 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYHLADCIAEKLKGLFTLFAGHL 1963
Query: 423 LE 424
++
Sbjct: 1964 VK 1965
Score = 130 (50.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 63/215 (29%), Positives = 96/215 (44%)
Query: 362 KLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAE-SHRSLFVPYFK 420
+LT L R+ + AESD+E++G + ID + ++V KL+E + R LF F
Sbjct: 1871 QLTAFFLEALDFRA-QHAESDLEEVGRTEDYIIDCLV---AMVVKLSEVTFRPLFFKLFD 1926
Query: 421 YL-LEGCVQ-------HLTDA-----KGVNT--ANSTRKKKARIQEAGTIKEQNGSL--S 463
+ E + HL D KG+ T A K A I + + + S
Sbjct: 1927 WAKTEDAPKDRLLTFYHLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDS 1986
Query: 464 INHWQ----LRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHL 519
N + L +++ L+K FL+DT FL + L+ P+V QL E G EE
Sbjct: 1987 ENDPEKCCLLLQFILNCLYKIFLFDTQH--FLSKERAEALMMPLVDQL--ENRLGGEEKF 2042
Query: 520 NVPTVKEVDDLLVVCIGQMAVTAGTDLLWKPLNHE 554
+ V L+ C+ Q +V D LWKPLN++
Sbjct: 2043 Q----ERVTQHLIPCLAQFSVAVADDSLWKPLNYQ 2073
Score = 76 (31.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 44/195 (22%), Positives = 87/195 (44%)
Query: 73 FRKMCSEVVLLVDNS--TGESNISLKLTAVSTLEVLANRF-ASYDSVFNLCLASVTNSI- 128
F ++ +V +V + T E + + TA+ TL++L F A F L + I
Sbjct: 1647 FLELVPVLVAMVKHKRKTLEEHAINRQTALYTLKLLCKNFGAENPEPFIPVLTTAVRLIV 1706
Query: 129 --SSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDK 186
+ + S L +V+ L A+ +LP +M ++ ++T +S +
Sbjct: 1707 AGTKEEKNVLGSALLCVAEVVSTLQALAIPQLPSLMPSL------LTTM-----KSTREL 1755
Query: 187 TQRESLMASVLITLEAVIDKLGGFLNPYL-GDITELLVL---CPEYLPGSDPKLKVKADA 242
E + S L L+ V++ L F++PYL G +++++ L E P S + V+ +
Sbjct: 1756 VSGEVYLLSALAALQKVVETLPHFISPYLEGVLSQVIQLEKITSEMGPAS--QANVRLTS 1813
Query: 243 VRRLLTDKIQVIVLI 257
+++ L + VL+
Sbjct: 1814 LKKTLATTLSPRVLL 1828
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 71 ESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNL 119
ESF K E VL G+ ++ + L+A+ E+ F+S +V NL
Sbjct: 515 ESFIK---EAVL---TRLGDDSLDVVLSALHAFEIFKQHFSSEVTVSNL 557
>RGD|1564769 [details] [associations]
symbol:Heatr1 "HEAT repeat containing 1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
InterPro:IPR016024 RGD:1564769 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 KO:K14550 InterPro:IPR012954 InterPro:IPR022125
Pfam:PF08146 Pfam:PF12397 SMART:SM01036 CTD:55127 OrthoDB:EOG4TMR15
EMBL:CH474071 IPI:IPI00364914 RefSeq:NP_001101888.1
RefSeq:XP_003751770.1 UniGene:Rn.47600 Ensembl:ENSRNOT00000037142
GeneID:100910568 GeneID:361262 KEGG:rno:100910568 KEGG:rno:361262
UCSC:RGD:1564769 NextBio:675737 Uniprot:D3ZL86
Length = 2143
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
IL I M + + ++ L ALD R QH ++++ E +I ++++ +K
Sbjct: 1846 ILQEHIGVMKKEELLSHQSQLTTFFLEALDFRAQHSEDDLEEVGKTESWIIDCLVAMVVK 1905
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY+L + +AE + LF + +L
Sbjct: 1906 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYNLADCIAEKLKGLFTLFAGHL 1957
Query: 423 LE 424
++
Sbjct: 1958 VK 1959
Score = 125 (49.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 60/221 (27%), Positives = 96/221 (43%)
Query: 356 VISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAE-SHRSL 414
++S +LT L R+ + +E D+E++G +S ID + ++V KL+E + R L
Sbjct: 1859 LLSHQSQLTTFFLEALDFRA-QHSEDDLEEVGKTESWIIDCLV---AMVVKLSEVTFRPL 1914
Query: 415 FVPYFKYL-LEGCVQ-------HLTDA-----KGVNT--ANSTRKKKA-RIQEAGTIKEQ 458
F F + E + +L D KG+ T A K A + + K
Sbjct: 1915 FFKLFDWAKTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTD 1974
Query: 459 NGSLSINH-----WQLRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPA 513
H L +++ L+K FL+DT + F+ + L+ P+V QL E
Sbjct: 1975 EAFFDSEHDPEKCCLLLQFILNCLYKIFLFDTQN--FMSKERAEALMMPLVDQL--ENRL 2030
Query: 514 GLEEHLNVPTVKEVDDLLVVCIGQMAVTAGTDLLWKPLNHE 554
G E+ K LV CI Q +V D +WKPLN++
Sbjct: 2031 GGEDRFQERVTKH----LVPCIAQFSVAMADDSMWKPLNYQ 2067
Score = 70 (29.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/196 (20%), Positives = 87/196 (44%)
Query: 73 FRKMCSEVVLLVDNSTGESNISLKL---TAVSTLEVLANRFASYD-SVFNLCLASVTNSI 128
F K+ ++ +V + E+ + TA+ TL++L F + + F L++ I
Sbjct: 1640 FLKLVPVLLAIVQHKKKEAEDEQAINRQTALYTLKLLCKNFGAQNREPFIPVLSTAVKLI 1699
Query: 129 SSRNLA---LASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNED 185
+ + S L + + L A+ +LP +M + + T + +S +
Sbjct: 1700 APEKKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPS-------LLTAI----KSTSE 1748
Query: 186 KTQRESLMASVLITLEAVIDKLGGFLNPYL-GDITELLVLCPEYLP---GSDPKLKVKAD 241
+ E + S L L V++ L F++PYL G +T+++ L E + GS + ++
Sbjct: 1749 LVRSEVCLLSALTALHKVVETLPHFISPYLEGLLTQVIHL--EKITSEMGSASQANIRLT 1806
Query: 242 AVRRLLTDKIQVIVLI 257
++++ L + VL+
Sbjct: 1807 SLKKTLATGLSPRVLL 1822
>UNIPROTKB|F1MDU9 [details] [associations]
symbol:HEATR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GeneTree:ENSGT00390000015845
InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397
SMART:SM01036 OMA:CQKTIQQ EMBL:DAAA02061483 EMBL:DAAA02061484
IPI:IPI00720806 Ensembl:ENSBTAT00000061542 ArrayExpress:F1MDU9
Uniprot:F1MDU9
Length = 2142
Score = 137 (53.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 304 ILGNIISRMDRSSIGGFHGKIFDQCLLALDLRRQHRVS-IQDIDIVEKSVISTVISLTMK 362
+L I M + + ++ L ALD R QH + +++I E +I ++++ +K
Sbjct: 1845 VLREHIGVMRKEELASHQPQLTTFFLEALDFRTQHAENDLEEIGKTENYIIDCLVAMVVK 1904
Query: 363 LTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAESHRSLFVPYFKYL 422
L+E FRPLF + +WA++ ED DR + FY+L + +AE + LF + +L
Sbjct: 1905 LSEVTFRPLFFKLFDWAKT--EDAPK------DRLLTFYNLADCIAEKLKGLFTLFAGHL 1956
Query: 423 LE 424
++
Sbjct: 1957 VK 1958
Score = 121 (47.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 62/215 (28%), Positives = 96/215 (44%)
Query: 362 KLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKLAE-SHRSLFVPYFK 420
+LT L R+ + AE+D+E+IG ++ ID + ++V KL+E + R LF F
Sbjct: 1864 QLTTFFLEALDFRT-QHAENDLEEIGKTENYIIDCLV---AMVVKLSEVTFRPLFFKLFD 1919
Query: 421 YL-LEGCVQ-------HLTDA-----KGVNT--ANSTRKKKARIQEAGTIKEQNGSL--S 463
+ E + +L D KG+ T A K A I + + + S
Sbjct: 1920 WAKTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDS 1979
Query: 464 INHWQ----LRALVISSLHKCFLYDTASLKFLDSTNFQVLLKPIVSQLAAEPPAGLEEHL 519
N + L +++ L+K FL+DT FL + L+ P+V QL E G EE
Sbjct: 1980 ENDPEKCCLLLQFILNCLYKIFLFDTQH--FLSKERAEALMVPLVDQL--ENRLGGEEKF 2035
Query: 520 NVPTVKEVDDLLVVCIGQMAVTAGTDLLWKPLNHE 554
K L+ C+ Q +V D LWKPLN++
Sbjct: 2036 QERVTKH----LIPCLAQFSVAMADDSLWKPLNYQ 2066
Score = 66 (28.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 98 TAVSTLEVLANRF-ASYDSVFNLCLASVTNSIS---SRNLALASSCLRTTGALVNVLGLK 153
TA+ TL++L F A F L + I+ + S L +V+ L
Sbjct: 1667 TALYTLKLLCKNFGAENPEPFVPVLHTTVKLIALGAKEEKNVLGSALLCVAEVVSTLEAL 1726
Query: 154 ALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAVIDKLGGFLNP 213
A+ +LP +M + R S + E + S L L+ V++ L F++P
Sbjct: 1727 AIPQLPSLMPPLLTTMR-----------STRELVSGEVYLLSALAALQKVVETLPHFISP 1775
Query: 214 YL-GDITELLVL---CPEYLPGSDPKLKVKADAVRRLLTDKIQVIVLI 257
YL G +++++ L E P S + V+ ++++ L + VL+
Sbjct: 1776 YLEGVLSQVIHLEKITSEMGPAS--QANVRLTSLKKTLATMLSPRVLL 1821
Score = 55 (24.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 66 DDSAFESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNL 119
++S ESF K E +L G+ ++ + L+AVS EV F+S +V +L
Sbjct: 510 EESIDESFIK---EAIL---TRLGDDSVDVVLSAVSAFEVFKQHFSSEVTVSHL 557
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 153 KALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLITLEAVIDKLGGFLN 212
K L + I V K + + Y ++ T S + S L+ E + D + L
Sbjct: 184 KDLGFMDFICSLVTKSVKVFAEYPGSSSQLRVLLTFYASTIVSALVAAETLSDNIVAKLF 243
Query: 213 PYL 215
PY+
Sbjct: 244 PYI 246
>CGD|CAL0003770 [details] [associations]
symbol:orf19.7215 species:5476 "Candida albicans" [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0033553 "rDNA heterochromatin"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0030688
"preribosome, small subunit precursor" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034455 "t-UTP complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR016024 CGD:CAL0003770
GO:GO:0016021 SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR021133 PROSITE:PS50077 GO:GO:0030529
GO:GO:0006364 EMBL:AACQ01000092 eggNOG:NOG116525 KO:K14550
InterPro:IPR012954 InterPro:IPR022125 Pfam:PF08146 Pfam:PF12397
SMART:SM01036 RefSeq:XP_715016.1 STRING:Q59ZX6 GeneID:3643345
KEGG:cal:CaO19.7215 Uniprot:Q59ZX6
Length = 1818
Score = 129 (50.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 348 VEKSVISTVISLTMKLTETMFRPLFIRSIEWAESDVEDIGSMKSKSIDRAIVFYSLVNKL 407
+E S I+ MKL + FRPLF + WA D E ++K+ + R + F+ NKL
Sbjct: 1573 LESSFHGCAIAFVMKLNDKSFRPLFANLVRWAV-DGEG-ATLKTNEVSRLLAFFRFFNKL 1630
Query: 408 AESHRSLFVPYFKYLLE 424
+ +S+ YF YLL+
Sbjct: 1631 QDELKSIITSYFSYLLD 1647
Score = 66 (28.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 29/136 (21%), Positives = 54/136 (39%)
Query: 84 VDNSTGESNISLKLTAVSTLEVLANRFASYDS----VFNLCLASVTNSISSRNLALASSC 139
VD ++ + T V+ FAS D + +L + + + + + +
Sbjct: 1335 VDVELQQAYLDTFSTIVNKFGASGTEFASSDVSKVLIESLGIVTTDRGLLNEQPEVIIAS 1394
Query: 140 LRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMASVLIT 199
+ ++VN+LG+K L P ++ K + S DK + L SVL+
Sbjct: 1395 INAITSIVNILGVKTLGLFPKVVPPALK--------IWESTNSLGDKESAKLLQGSVLVL 1446
Query: 200 LEAVIDKLGGFLNPYL 215
L I K+ F++ L
Sbjct: 1447 LSCYIKKIPAFMSTTL 1462
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 85 DNSTGESNISLKLTAVSTLEVLANRF--ASYDSVFNLCLASVTNSISSRNLALASSCLRT 142
DN+ + I +K + L+ A + YD FNL L + + +S+ + L S + T
Sbjct: 461 DNAVEDIEI-VKTVDFTKLQSTAKSYFNTEYDEEFNLVLKELKSVLSASDAKLHVSVILT 519
Query: 143 -------TGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRESLMAS 195
T + + +A P + ++R + + S + ++N +N KT L+
Sbjct: 520 FLQKVFSTPEVALTFAFR-VALTPAVPLSIRLSAIK-SIRIKIKNAAN-GKTDFYLLIPL 576
Query: 196 VLITL 200
+L+ L
Sbjct: 577 ILLAL 581
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 554 529 0.00092 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 613 (65 KB)
Total size of DFA: 281 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.85u 0.08s 41.93t Elapsed: 00:00:06
Total cpu time: 41.86u 0.08s 41.94t Elapsed: 00:00:06
Start: Fri May 10 18:13:52 2013 End: Fri May 10 18:13:58 2013