Query 041546
Match_columns 490
No_of_seqs 342 out of 2445
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 13:52:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 2.2E-85 7.5E-90 700.0 39.5 438 37-484 3-516 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2.2E-81 7.6E-86 667.4 38.1 426 40-481 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 3.5E-76 1.2E-80 631.4 36.1 434 35-483 5-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 5.1E-67 1.7E-71 555.5 33.9 412 40-481 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2E-65 6.9E-70 545.8 35.8 412 54-480 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 1.3E-59 4.4E-64 504.5 39.7 419 43-480 25-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 9.4E-60 3.2E-64 505.6 36.0 425 37-481 17-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 5.7E-59 2E-63 499.9 34.3 411 56-481 34-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 8.6E-58 2.9E-62 488.7 34.4 420 36-487 4-484 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 5.9E-56 2E-60 470.1 28.7 397 54-480 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.1E-36 3.9E-41 328.0 25.7 206 36-256 29-266 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 2.2E-29 7.7E-34 270.1 31.4 178 78-259 53-262 (524)
13 4feh_A Oxidoreductase DPRE1; a 100.0 1.5E-28 5E-33 260.6 33.9 158 78-240 35-219 (481)
14 4bby_A Alkyldihydroxyacetoneph 100.0 2.9E-29 1E-33 276.0 21.3 217 36-260 159-409 (658)
15 3pm9_A Putative oxidoreductase 100.0 2.4E-28 8.2E-33 258.8 20.3 180 78-260 43-252 (476)
16 2vfr_A Xylitol oxidase, aldito 100.0 1.9E-26 6.6E-31 241.4 27.3 154 78-241 12-189 (422)
17 2uuu_A Alkyldihydroxyacetoneph 99.9 3.5E-27 1.2E-31 255.4 20.7 176 84-261 135-340 (584)
18 1wvf_A 4-cresol dehydrogenase 99.9 3.6E-26 1.2E-30 245.3 21.5 176 84-260 54-265 (520)
19 2i0k_A Oxidoreductase; MIX alp 99.9 2.4E-25 8.1E-30 240.6 17.0 178 55-242 9-228 (561)
20 1e8g_A Vanillyl-alcohol oxidas 99.9 4.8E-24 1.7E-28 230.5 23.4 177 84-260 68-297 (560)
21 1f0x_A DLDH, D-lactate dehydro 99.9 9.9E-25 3.4E-29 234.9 15.2 173 84-260 43-297 (571)
22 3js8_A Cholesterol oxidase; ch 99.9 3.2E-24 1.1E-28 228.0 16.7 158 78-239 21-221 (540)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 3.4E-24 1.2E-28 215.5 13.1 148 84-237 52-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.1E-23 7.3E-28 211.9 12.9 149 83-237 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 2.6E-23 8.8E-28 210.1 10.5 146 84-235 46-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 4.7E-22 1.6E-26 201.4 16.5 148 84-237 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 2.6E-20 8.7E-25 182.4 10.7 135 85-236 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.5 2.2E-14 7.4E-19 136.4 11.8 99 144-245 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 1.2E-06 4E-11 86.5 8.6 138 86-234 4-176 (287)
30 1n62_C Carbon monoxide dehydro 97.5 0.00022 7.4E-09 70.2 8.0 139 86-234 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.2 0.00059 2E-08 71.5 7.7 135 89-234 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 96.2 0.0054 1.8E-07 60.2 5.8 137 85-232 3-173 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.1 0.01 3.5E-07 58.7 7.4 78 86-169 9-90 (305)
34 3hrd_C Nicotinate dehydrogenas 93.5 0.079 2.7E-06 52.0 5.5 76 86-166 2-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.4 0.28 9.7E-06 48.6 4.5 76 86-167 5-84 (324)
36 1wvf_A 4-cresol dehydrogenase 80.3 2.1 7.2E-05 45.1 6.1 30 447-476 481-511 (520)
37 3unc_A Xanthine dehydrogenase/ 74.7 2.5 8.5E-05 49.7 5.1 78 86-169 232-313 (1332)
38 4bby_A Alkyldihydroxyacetoneph 72.4 6.7 0.00023 42.5 7.5 29 446-474 625-654 (658)
39 2i0k_A Oxidoreductase; MIX alp 49.8 6.9 0.00023 41.6 2.4 23 454-476 533-555 (561)
40 1f0x_A DLDH, D-lactate dehydro 47.3 9.6 0.00033 40.6 3.0 32 453-485 536-568 (571)
41 3zyv_A AOH1; oxidoreductase, m 43.5 27 0.00091 41.1 6.1 77 89-170 242-321 (1335)
42 3js8_A Cholesterol oxidase; ch 38.5 11 0.00039 39.7 1.8 23 453-475 511-533 (540)
43 2uuu_A Alkyldihydroxyacetoneph 34.7 51 0.0017 35.0 6.2 26 449-474 554-580 (584)
44 3pm9_A Putative oxidoreductase 33.8 16 0.00054 37.9 2.0 28 446-473 443-471 (476)
45 1wn2_A Peptidyl-tRNA hydrolase 30.0 85 0.0029 25.9 5.5 38 84-121 53-91 (121)
46 1xty_A PTH, peptidyl-tRNA hydr 29.7 88 0.003 25.7 5.6 41 78-120 48-89 (120)
47 1rzw_A Protein AF2095(GR4); be 29.1 63 0.0022 26.9 4.6 37 85-121 47-84 (123)
48 1rlk_A Hypothetical protein TA 27.8 87 0.003 25.7 5.2 38 84-121 49-87 (117)
49 2zv3_A PTH, peptidyl-tRNA hydr 27.4 84 0.0029 25.7 5.0 37 84-120 47-84 (115)
50 1vd2_A Protein kinase C, IOTA 24.7 1.1E+02 0.0036 24.0 4.9 54 152-214 19-72 (89)
51 4gx7_A Cytolysin and hemolysin 23.6 93 0.0032 26.7 4.6 38 135-201 72-109 (152)
52 1e8g_A Vanillyl-alcohol oxidas 23.2 27 0.00093 36.9 1.5 33 454-486 523-555 (560)
53 3fbi_A Mediator of RNA polymer 21.9 28 0.00096 27.1 1.0 16 451-466 23-39 (84)
54 3p04_A Uncharacterized BCR; SE 21.7 85 0.0029 24.4 3.7 34 88-143 7-40 (87)
55 1q7s_A BIT1, protein CGI-147; 21.1 1.6E+02 0.0054 24.0 5.6 37 84-120 49-86 (117)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.2e-85 Score=699.98 Aligned_cols=438 Identities=55% Similarity=0.974 Sum_probs=375.9
Q ss_pred ChhhHHHHHhcCCCCCC-CcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEE
Q 041546 37 DLESLIQCLSMHSDNSS-ISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRV 115 (490)
Q Consensus 37 ~~~~~~~~l~~~~~~~~-~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 115 (490)
..++|++||+.+...+. +++.|++|+++.|++.+.++++|.||+....++|.+||+|++++||+++|++|+++++|+.+
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 35789999998876666 89999999999999998888999999998889999999999999999999999999999999
Q ss_pred EcCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhhc-----------------------
Q 041546 116 RSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEKR----------------------- 172 (490)
Q Consensus 116 ~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g----------------------- 172 (490)
||||||+.+.+.....++++|||++|++|++|.++++|+||||+++++|+++|.++|
T Consensus 83 rggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg 162 (518)
T 3vte_A 83 RSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGG 162 (518)
T ss_dssp ESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCC
T ss_pred ECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCC
Confidence 999999998875322249999999999999999999999999999999999999874
Q ss_pred cCCccccccccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechh-hH
Q 041546 173 YGAMLRKYGLAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLE-QN 251 (490)
Q Consensus 173 ~G~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~-~~ 251 (490)
+|+++++||+++|+|++++||++||++++.+.+++|||||+|||+ +|+|||||+++|||+|.|+.++.|.+.+..+ ++
T Consensus 163 ~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg-~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 241 (518)
T 3vte_A 163 YGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGG-GENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHG 241 (518)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSC-GGGTCEEEEEEEECEECCSCEEEEEEEECCCHHH
T ss_pred CccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheeccc-CCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHH
Confidence 788899999999999999999999999976557899999999984 4999999999999999999888888887654 56
Q ss_pred HHHHHHHHhhcc--------------c--------------------------------ccccCCCCCCCCCccccccce
Q 041546 252 ATKIVHKWQLLP--------------L--------------------------------MQESFPELGLTKEDCIEMSWI 285 (490)
Q Consensus 252 ~~~~~~~~~~~~--------------~--------------------------------~~~~~p~l~~~~~~~~~~~~~ 285 (490)
+.+++.+||++. . +...+|+++....+|.+++|+
T Consensus 242 ~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 242 LVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 788999999621 0 011244555444567777888
Q ss_pred eeeeeecCCCCC-Cc---hhhhhhcccCCccccccccCCCcccccccCCCCCCCHHHHHHHHHHHhhcCCceeEEEEEec
Q 041546 286 ESAHDLAGFNKG-DP---LDLLLDRNSRTNGVAEDAATNGFFKSKSDYVKQPIPENAFEGIYDNFYEEDGETAFMLLVPY 361 (490)
Q Consensus 286 ~s~~~~~g~~~~-~~---~~~ll~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~ 361 (490)
+++.++++.+.+ .+ ++.++++.+. ...|||.||+|+++++++++++.+++++.+.+...+.+++++|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~ 392 (518)
T 3vte_A 322 DTTIFYSGVVNFNTANFKKEILLDRSAG---------KKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPY 392 (518)
T ss_dssp HHHHHTSSSCCC-----CGGGGGCTTCS---------CCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEEC
T ss_pred hhhhhhhcCCccCCccchhhhhccCCcC---------cccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeec
Confidence 777776665543 44 5556655432 3457789999999999999999999998875433488999999
Q ss_pred CCccccCCCCCCCCcccCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhccccccCCCCccccccCCCccC-CCCCCCcc
Q 041546 362 GGKMSEISESETPYPHRAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMTPYVSENPREAYINYRDLDIG-TNNRGHTS 440 (490)
Q Consensus 362 GG~~~~v~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~aY~Ny~d~d~~-~~~~~~~s 440 (490)
||+|++|++++||||||++++|.+++.+.|.+++.++++++|++++++.|.||++++++++|+||+|.|++ .+..++++
T Consensus 393 GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~ 472 (518)
T 3vte_A 393 GGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNN 472 (518)
T ss_dssp CGGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCC
T ss_pred CccccCCCCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccc
Confidence 99999999999999999966899999999988788889999999999999999877788999999999988 55456788
Q ss_pred hhhhhhhhhhhhcccHHHHHHhHhccCCCCCCcCCCCCCCcccc
Q 041546 441 IKQASIWGSKYFKNNFKRLVHVKTMVDPYDFFKNEQSIPPLTSW 484 (490)
Q Consensus 441 ~~~~~~~g~~yfg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~~~ 484 (490)
|++++.|+.+|||+||+||++||+||||+|||+++|||||+++|
T Consensus 473 ~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~ 516 (518)
T 3vte_A 473 YTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPH 516 (518)
T ss_dssp HHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTT
T ss_pred hhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999774
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.2e-81 Score=667.35 Aligned_cols=426 Identities=44% Similarity=0.846 Sum_probs=363.4
Q ss_pred hHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCC
Q 041546 40 SLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGG 119 (490)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggG 119 (490)
+|++||+.+..++ ++.|++|+|+.|++++.++++|.||+....++|.+||+|++++||+++|++|+++++|+++||||
T Consensus 1 ~~~~cl~~~~~~~--~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgG 78 (495)
T 3fw9_A 1 DLLSCLTFNGVRN--HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGG 78 (495)
T ss_dssp CHHHHHHHTTCCC--EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSC
T ss_pred ChhHHHhhcCCCC--CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 4999999886432 68899999999999988889999999988999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhh--c---------------------cCCc
Q 041546 120 HDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEK--R---------------------YGAM 176 (490)
Q Consensus 120 h~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~--g---------------------~G~~ 176 (490)
||+.|.+...+.+++||||++|++|++|.++++|+||||+++++|+++|.++ | +|++
T Consensus 79 h~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~ 158 (495)
T 3fw9_A 79 HSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMM 158 (495)
T ss_dssp CCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred cCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCccc
Confidence 9998888765445999999999999999999999999999999999999999 5 7888
Q ss_pred cccccccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechh-hHHHHH
Q 041546 177 LRKYGLAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLE-QNATKI 255 (490)
Q Consensus 177 ~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~-~~~~~~ 255 (490)
+++||+++|+|++++||++||++++++.+++||||++|||+ +|+|||||+++|||+|+|+.+..|.+.++.+ +++.++
T Consensus 159 ~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 159 SRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGG-GGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp HHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSC-TTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred ccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhccc-CCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 99999999999999999999999985567899999999954 4999999999999999999988888887653 667889
Q ss_pred HHHHhhcc-------------------------------------cccccCCCCCCCCCccccccceeeeeeecCCCCCC
Q 041546 256 VHKWQLLP-------------------------------------LMQESFPELGLTKEDCIEMSWIESAHDLAGFNKGD 298 (490)
Q Consensus 256 ~~~~~~~~-------------------------------------~~~~~~p~l~~~~~~~~~~~~~~s~~~~~g~~~~~ 298 (490)
+.+||.+. .+...+|+++....+|.+|+|++++.++++.+.
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-- 315 (495)
T 3fw9_A 238 LHKWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET-- 315 (495)
T ss_dssp HHHHHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC--
T ss_pred HHHHHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc--
Confidence 99999621 011124444444455666666666555554332
Q ss_pred chhhhhhcccCCccccccccCCCcccccccCCCCCCCHHHHHHHHHHHhhcCCceeEEEEEecCCccccCCCCCCCCccc
Q 041546 299 PLDLLLDRNSRTNGVAEDAATNGFFKSKSDYVKQPIPENAFEGIYDNFYEEDGETAFMLLVPYGGKMSEISESETPYPHR 378 (490)
Q Consensus 299 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~GG~~~~v~~~~tafphR 378 (490)
++.++++... ....+||.||+|+++++++++++.+++.+.+.+. +.+++++|||+|+++++++||||||
T Consensus 316 -~~~l~~~~~~--------~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR 384 (495)
T 3fw9_A 316 -VSQLNNRFLK--------FDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHR 384 (495)
T ss_dssp -GGGGGCTTSC--------SCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCC
T ss_pred -hhhhcCCCCC--------ccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCcccc
Confidence 3334433211 0235789999999999999999999999987765 7899999999999999999999999
Q ss_pred CCcEEEEEEEEEeCCC--ccchHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCC-----CCcchhhhhhhhhhh
Q 041546 379 AGNIYQILYTVTWGED--ETSQSHIDWIRRLYSHMTPYVSENPREAYINYRDLDIGTNNR-----GHTSIKQASIWGSKY 451 (490)
Q Consensus 379 ~~~~~~i~~~~~w~~~--~~~~~~~~wi~~~~~~l~p~~~~~~~~aY~Ny~d~d~~~~~~-----~~~s~~~~~~~g~~y 451 (490)
++++|.+++.+.|.++ +.++++++|+++++++|.||++++++++|+||+|.|++.+.. ++++|++++.|+++|
T Consensus 385 ~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Y 464 (495)
T 3fw9_A 385 SGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESY 464 (495)
T ss_dssp TTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHH
T ss_pred CccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHH
Confidence 9778999999999764 667889999999999999998777789999999999874332 246788889999999
Q ss_pred hcccHHHHHHhHhccCCCCCCcCCCCCCCc
Q 041546 452 FKNNFKRLVHVKTMVDPYDFFKNEQSIPPL 481 (490)
Q Consensus 452 fg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 481 (490)
||+||+||++||+||||+|||+++|||||+
T Consensus 465 yg~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 465 FLSNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHhHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999999999999986
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.5e-76 Score=631.37 Aligned_cols=434 Identities=45% Similarity=0.857 Sum_probs=350.8
Q ss_pred CcChhhHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEE
Q 041546 35 VADLESLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIR 114 (490)
Q Consensus 35 ~~~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 114 (490)
.+..++|++||..... ++.|++|+++.|.+.+.++++|.||+....++|.+||+|++++||+++|++|+++++||.
T Consensus 5 ~~~~~~f~~~L~~~~~----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEIP----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ----CHHHHHHHHHSC----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHhhCC----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 5567899999998753 467899999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCcccc--CCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhhc--------------------
Q 041546 115 VRSGGHDFEGLSYVS--HVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEKR-------------------- 172 (490)
Q Consensus 115 v~ggGh~~~g~~~~~--~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g-------------------- 172 (490)
+|||||++.|.+.+. .+++++|||++|++|++|.++++|+||+|+++++|+++|.++|
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 999999998877542 1359999999999999999999999999999999999999987
Q ss_pred ---cCCccccccccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechh
Q 041546 173 ---YGAMLRKYGLAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLE 249 (490)
Q Consensus 173 ---~G~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~ 249 (490)
+|..+++||+++|+|+++|||++||++++.+.+++||||++|||+ +|+|||||+++||++|+|+.++.+.+.++..
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~-gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGG-GESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSC-SSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhc-ccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 788899999999999999999999999987778899999999887 6899999999999999999998888887777
Q ss_pred hHHHHHHHHHhhcccc---------------------------------cccCCCCCCCCCccccccceeeeeeecCCCC
Q 041546 250 QNATKIVHKWQLLPLM---------------------------------QESFPELGLTKEDCIEMSWIESAHDLAGFNK 296 (490)
Q Consensus 250 ~~~~~~~~~~~~~~~~---------------------------------~~~~p~l~~~~~~~~~~~~~~s~~~~~g~~~ 296 (490)
+.+.+++.+|+.+..- ...+|+++.....|.++.|++++.++.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 319 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHR 319 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEESSSEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEecCCCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccc
Confidence 7788889999873210 0111222222222222222222211111111
Q ss_pred CCchhhhhhcccCCccccccccCCCcccccccCCCCCCCHHHHHHHHHHHhhcCCceeEEEEEecCCccccCCCCCCCCc
Q 041546 297 GDPLDLLLDRNSRTNGVAEDAATNGFFKSKSDYVKQPIPENAFEGIYDNFYEEDGETAFMLLVPYGGKMSEISESETPYP 376 (490)
Q Consensus 297 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~GG~~~~v~~~~tafp 376 (490)
....+.++++.. ....+.+.+++++.+++++..++.+++.+...+. ...+.++++||+++++++++||||
T Consensus 320 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~ 389 (500)
T 3tsh_A 320 DALEDDLLNRQN---------SFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFP 389 (500)
T ss_dssp SCHHHHHHCCCC---------CCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCC
T ss_pred cccccccccccc---------cccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCc
Confidence 111111111111 1234456778888888999999888887665543 356778999999999999999999
Q ss_pred ccCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCC--CCcchhhhhhhhhhhhcc
Q 041546 377 HRAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMTPYVSENPREAYINYRDLDIGTNNR--GHTSIKQASIWGSKYFKN 454 (490)
Q Consensus 377 hR~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~aY~Ny~d~d~~~~~~--~~~s~~~~~~~g~~yfg~ 454 (490)
||++.+|.+++...|.+++++++.++|++++++.|.|++++.++++|+||+|.|++.+.. ...++...+.|+++|||+
T Consensus 390 ~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 390 HRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp CCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred ccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 999888999999999988888999999999999999998878889999999999885432 123466678999999999
Q ss_pred cHHHHHHhHhccCCCCCCcCCCCCCCccc
Q 041546 455 NFKRLVHVKTMVDPYDFFKNEQSIPPLTS 483 (490)
Q Consensus 455 n~~RL~~vK~kyDP~n~F~~~qsI~p~~~ 483 (490)
||+||++||+||||+|+|+++|||||+.+
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 99999999999999999999999999753
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=5.1e-67 Score=555.48 Aligned_cols=412 Identities=24% Similarity=0.400 Sum_probs=317.3
Q ss_pred hHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCC
Q 041546 40 SLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGG 119 (490)
Q Consensus 40 ~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggG 119 (490)
+|++||+.. ...+++|+++.|++.. ..+|.|+ .++|.+||+|++++||+++|++|+++++|+.+||||
T Consensus 2 ~l~~cl~~~------~~~v~~p~~~~y~~~~--~~~n~~~----~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAA------GVPIDIPGTADYERDV--EPFNIRL----PYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHT------TCCBCCTTSHHHHHHT--CCSBTTS----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhC------CCcEECCCCCchHHHH--HHhhccc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 589999997 3458999999999874 3555554 579999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCEEEEEcCCCCcEE-EeCCCCEEEEcCCCChHHHHHHHHhhc----------------------cCCc
Q 041546 120 HDFEGLSYVSHVPFVVIDLLNLSEIS-VDAAEQTAWVQAGATLGQLYYRIAEKR----------------------YGAM 176 (490)
Q Consensus 120 h~~~g~~~~~~~~gvvIdl~~l~~i~-vd~~~~~v~v~aG~~~~~l~~~l~~~g----------------------~G~~ 176 (490)
||+.+.+....+++++|||++|++|. +|.++++|+||+|+++++|+++|.++| +|+.
T Consensus 70 h~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~~~~vgvgG~~~ggg~G~~ 149 (473)
T 3rja_A 70 HSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGTCPGVGISGHFAHGGFGFS 149 (473)
T ss_dssp CCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred CCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCCCCCcEeeeeccCCCCCcc
Confidence 99986554332358999999999997 999999999999999999999999887 7788
Q ss_pred cccccccccceeeeEEEccCCceee-ccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechh--hHHH
Q 041546 177 LRKYGLAADNIVDARLTDANGRLLD-RKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLE--QNAT 253 (490)
Q Consensus 177 ~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~--~~~~ 253 (490)
+++||+++|+|++++||++||++++ +..+++||||++||++ |+|||||+++|||+|+|+.++.+.+.+... +.+.
T Consensus 150 ~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~--g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 227 (473)
T 3rja_A 150 SHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG--SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSAL 227 (473)
T ss_dssp HHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG--GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHH
T ss_pred cccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC--CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHH
Confidence 9999999999999999999999997 5667899999999999 999999999999999999888888777654 3477
Q ss_pred HHHHHHhhcccccccCC-CCCCCCCccccccceeeeeeecCCCC-CCc-hhhhhhcccCC-----c-cc---------c-
Q 041546 254 KIVHKWQLLPLMQESFP-ELGLTKEDCIEMSWIESAHDLAGFNK-GDP-LDLLLDRNSRT-----N-GV---------A- 314 (490)
Q Consensus 254 ~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~s~~~~~g~~~-~~~-~~~ll~~~~~~-----~-~~---------~- 314 (490)
+++++||.+.. ...| ++...-....... +.....|.|..+ +.. +.++++..+.+ . .+ .
T Consensus 228 ~~~~~~~~~~~--~~~p~~l~~~~~~~~~~~-~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~ 304 (473)
T 3rja_A 228 KGIEAVEDYAR--WVAPREVNFRIGDYGAGN-PGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSN 304 (473)
T ss_dssp HHHHHHHHHHH--HTCCTTEEEEEEESSSSC-CEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSS
T ss_pred HHHHHHHHHhh--hCCChhHEEEEEEcCCCc-EEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhc
Confidence 88999988532 0122 2211000000000 111122344321 111 34444332200 0 00 0
Q ss_pred ---cccc--C-CCcccccccCCCCCCCHHHHHHHHHHHhhcC-C---ceeEEEEEecCC---ccccCCCCCCCCcccCCc
Q 041546 315 ---EDAA--T-NGFFKSKSDYVKQPIPENAFEGIYDNFYEED-G---ETAFMLLVPYGG---KMSEISESETPYPHRAGN 381 (490)
Q Consensus 315 ---~~~~--~-~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~-~---~~~~~~~~~~GG---~~~~v~~~~tafphR~~~ 381 (490)
.+.. . ...|+.||.+.. ++++++++.+++.+.+.. . ..+.+++++||| +++++++++||||||+ .
T Consensus 305 ~~~~~~~~~~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~ 382 (473)
T 3rja_A 305 FDHVDFITPQPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-K 382 (473)
T ss_dssp SSCCCCSSCCCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-C
T ss_pred CCCcccccCCCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-c
Confidence 0000 0 245778888864 699999999999886532 1 235788999998 6788899999999999 6
Q ss_pred EEEEEEEEEeCC-CccchHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhhhcccHHHHH
Q 041546 382 IYQILYTVTWGE-DETSQSHIDWIRRLYSHMTPYVSENPREAYINYRDLDIGTNNRGHTSIKQASIWGSKYFKNNFKRLV 460 (490)
Q Consensus 382 ~~~i~~~~~w~~-~~~~~~~~~wi~~~~~~l~p~~~~~~~~aY~Ny~d~d~~~~~~~~~s~~~~~~~g~~yfg~n~~RL~ 460 (490)
.|.+++.+.|.+ ++.+++..+|++++++.+.+.....++++|+||+|.+++ ...|+++|||+||+||+
T Consensus 383 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL~ 451 (473)
T 3rja_A 383 LWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARLQ 451 (473)
T ss_dssp SEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHHH
T ss_pred cEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHHH
Confidence 899999999964 455566778888888877665544456899999998875 23799999999999999
Q ss_pred HhHhccCCCCCCcCCCCCCCc
Q 041546 461 HVKTMVDPYDFFKNEQSIPPL 481 (490)
Q Consensus 461 ~vK~kyDP~n~F~~~qsI~p~ 481 (490)
+||+||||+|+|+++|||||.
T Consensus 452 ~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 452 KLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHCTTCTTCCTTSCCCC
T ss_pred HHhhccCchhhCCCCcCCCCC
Confidence 999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2e-65 Score=545.81 Aligned_cols=412 Identities=21% Similarity=0.353 Sum_probs=313.4
Q ss_pred CcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCE
Q 041546 54 ISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPF 133 (490)
Q Consensus 54 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~g 133 (490)
+.+.+++|+++.|++.+ ..+|.|| ..+|.+||+|++++||+++|++|+++++||++|||||++.+.+.+.+ ++
T Consensus 8 ~~~~~~~p~~~~y~~~~--~~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELS--HSDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-RD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHT--CCSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-CS
T ss_pred CCCceECCCCcchHHHH--HHHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-CE
Confidence 57889999999999885 3667777 46999999999999999999999999999999999999998876543 48
Q ss_pred EEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHh-hc---------------------cCCccccccccccceeeeE
Q 041546 134 VVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAE-KR---------------------YGAMLRKYGLAADNIVDAR 191 (490)
Q Consensus 134 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g---------------------~G~~~~~~G~~~D~v~~~~ 191 (490)
++|||++|++|++|.++++|+||+|+++++|+++|.+ +| +|+++++||+++|+|+++|
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~e 160 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVE 160 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEE
Confidence 9999999999999999999999999999999999974 56 8888999999999999999
Q ss_pred EEc--cCCc--eee----ccCcchhhhhhhccccCCCceEEEEEEEEEE----------Eec-CCeEEEEEEeechhh--
Q 041546 192 LTD--ANGR--LLD----RKSMGEDLFWAIQGGGIGASFGVIVPWKVRL----------VIV-PSTVTRFRVSRSLEQ-- 250 (490)
Q Consensus 192 vV~--~~G~--i~~----~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl----------~p~-p~~~~~~~~~~~~~~-- 250 (490)
||+ +||+ +++ ++.+++|||||+|||| +|+|||||+++||+ +|. |..++.+.+.|+..+
T Consensus 161 vV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G-~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~ 239 (501)
T 3pop_A 161 VAVVDESRTVRLVTARADDTGDLGELFWAHTGGG-GGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMID 239 (501)
T ss_dssp EEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSC-TTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCC
T ss_pred EEEecCCCCEEEEEeccCCCCCCccHHHHhhccC-CCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcC
Confidence 999 8999 343 2467899999999995 59999999999998 664 456777777776432
Q ss_pred --HHHHHHHHHhhcccccccCCCC---CCC----CCccccccceeeeeeecCC-CCCCc-hhhhhhc-------ccCCc-
Q 041546 251 --NATKIVHKWQLLPLMQESFPEL---GLT----KEDCIEMSWIESAHDLAGF-NKGDP-LDLLLDR-------NSRTN- 311 (490)
Q Consensus 251 --~~~~~~~~~~~~~~~~~~~p~l---~~~----~~~~~~~~~~~s~~~~~g~-~~~~~-~~~ll~~-------~~~~~- 311 (490)
...+++..|+.+.... ..|+. ++. ........ +.....+.|. +++.. ++++++. .+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~~ 317 (501)
T 3pop_A 240 ETSFVTVMRRFFEWHERH-SEPGSPESSLFATFFVNHVSSGV-LQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPRG 317 (501)
T ss_dssp HHHHHHHHHHHHHHHHHS-CCTTCGGGGEEEEEEEECGGGCE-EEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEEE
T ss_pred HHHHHHHHHHHHHHHhhc-cCCCccccceEEEEEecCCCCCe-EEEEEEEeCChHHHHHHHHHHHHhhhhccCCCcccee
Confidence 2346666665432100 01110 000 00000000 1111123342 22221 3444332 10000
Q ss_pred -cc--------cccc--cC--CCcccccccCCCCCCCHHHHHHHHHHHhhc-CCceeEEEEEecCCccccCCCCCCCCcc
Q 041546 312 -GV--------AEDA--AT--NGFFKSKSDYVKQPIPENAFEGIYDNFYEE-DGETAFMLLVPYGGKMSEISESETPYPH 377 (490)
Q Consensus 312 -~~--------~~~~--~~--~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~-~~~~~~~~~~~~GG~~~~v~~~~tafph 377 (490)
.+ .... .+ ..+++.||.|++++++++.++.+++.+.+. +.+.+.+++++|||+|+++++++|||||
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~h 397 (501)
T 3pop_A 318 GVMSWLTGTRYMSQADCGDVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQ 397 (501)
T ss_dssp EEEEHHHHHHHTCBCSCGGGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTTTSSCCC
T ss_pred EEeCHHHHHhhhcCCCCCcccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCCCCCccC
Confidence 00 0000 01 246788999999889999999999988763 2334788999999999999999999999
Q ss_pred cCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhccccc------cCCCCccccccCCCccCCCCCCCcchhhhhhhhhhh
Q 041546 378 RAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMTPYV------SENPREAYINYRDLDIGTNNRGHTSIKQASIWGSKY 451 (490)
Q Consensus 378 R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~p~~------~~~~~~aY~Ny~d~d~~~~~~~~~s~~~~~~~g~~y 451 (490)
|+ ..|++++...|.+++.++++++|++++++.|.++. ++.++++|+||+|.|++.+. .++| +..|+++|
T Consensus 398 R~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~-~~~~---~~~w~~~Y 472 (501)
T 3pop_A 398 RD-SVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA-RNRS---GEPWHHLY 472 (501)
T ss_dssp CS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT-TCCS---SCCHHHHH
T ss_pred cC-ccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc-cccc---cchHHHHH
Confidence 99 68999999999887788889999999999997553 33467999999999987422 1232 45699999
Q ss_pred hcccHHHHHHhHhccCCCCCCcCCCCCCC
Q 041546 452 FKNNFKRLVHVKTMVDPYDFFKNEQSIPP 480 (490)
Q Consensus 452 fg~n~~RL~~vK~kyDP~n~F~~~qsI~p 480 (490)
||+||+||++||+||||+|+|+++|||||
T Consensus 473 yg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 473 YKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred hHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 99999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.3e-59 Score=504.45 Aligned_cols=419 Identities=26% Similarity=0.428 Sum_probs=310.3
Q ss_pred HHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCC
Q 041546 43 QCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDF 122 (490)
Q Consensus 43 ~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~ 122 (490)
+||... ...+++|+++.|++.+ +..+|.||. ..|.+||+|++++||+++|++|+++++||.+||||||+
T Consensus 25 ~~l~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~ 93 (523)
T 2wdx_A 25 RCLPPA------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCF 93 (523)
T ss_dssp -CCCCC------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCS
T ss_pred hhcccC------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCC
Confidence 898876 4679999999999886 357788884 58999999999999999999999999999999999999
Q ss_pred CCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHh-hc---------------------cCCccccc
Q 041546 123 EGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAE-KR---------------------YGAMLRKY 180 (490)
Q Consensus 123 ~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g---------------------~G~~~~~~ 180 (490)
.+.+.+.+ ++++|||++|++|++|+++.+|+||+|+++.+|+++|.+ +| +|+++++|
T Consensus 94 ~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~ 172 (523)
T 2wdx_A 94 EDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLSRQF 172 (523)
T ss_dssp SSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHSCCCCCCCCTTCBHHHHHHHTCCCTTHHHH
T ss_pred CCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcCeEEccCCCCCCeeCccccCCCCCcccccc
Confidence 98776542 489999999999999999999999999999999999984 77 78899999
Q ss_pred cccccceeeeEEEccC--Cceee---ccC-cchh--hhhhhccccCCCceEEEEEEEEEE-----------EecCC-eEE
Q 041546 181 GLAADNIVDARLTDAN--GRLLD---RKS-MGED--LFWAIQGGGIGASFGVIVPWKVRL-----------VIVPS-TVT 240 (490)
Q Consensus 181 G~~~D~v~~~~vV~~~--G~i~~---~~~-~~~d--Lf~a~rG~~~~g~fGIIt~~~lkl-----------~p~p~-~~~ 240 (490)
|+++|+|+++|||++| |+++. ... +++| ||||+||++ +|+|||||+++||+ +|.|+ .+.
T Consensus 173 G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg-~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~ 251 (523)
T 2wdx_A 173 GSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGG-GGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLL 251 (523)
T ss_dssp CCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSC-SSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEE
T ss_pred cChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccC-CCCcEEEEEEEEEeecccCCCcccccCCCcccEE
Confidence 9999999999999955 99753 222 4455 999999876 59999999999999 99876 467
Q ss_pred EEEEeechh----hHHHHHHHHHhhcccccccCCCC---CC------CCCccc-cccceeeeeeecCCCCC-C-chhhhh
Q 041546 241 RFRVSRSLE----QNATKIVHKWQLLPLMQESFPEL---GL------TKEDCI-EMSWIESAHDLAGFNKG-D-PLDLLL 304 (490)
Q Consensus 241 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~l---~~------~~~~~~-~~~~~~s~~~~~g~~~~-~-~~~~ll 304 (490)
.+.+.++.+ +...++++.|+++.... ..|+. ++ ...... ....+.....+.|.... . .+.+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~ 330 (523)
T 2wdx_A 252 TSTVTFDWAGMTEAAFSRLLRNHGEWYERN-SGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHI 330 (523)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHHHS-CSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHH
T ss_pred EEEEEecccccCHHHHHHHHHHHHHHHhhc-CCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHH
Confidence 777777642 22346666665532110 11211 00 000000 00001111223333211 1 123333
Q ss_pred hcc------cCCccc-----cc---c-ccCCCcccccccCCCCCCCHHHHHHHHHHHhhcC-CceeEEEEEecCCccccC
Q 041546 305 DRN------SRTNGV-----AE---D-AATNGFFKSKSDYVKQPIPENAFEGIYDNFYEED-GETAFMLLVPYGGKMSEI 368 (490)
Q Consensus 305 ~~~------~~~~~~-----~~---~-~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~-~~~~~~~~~~~GG~~~~v 368 (490)
+.. +..... .+ . .....+++.++.|+.++++.+.++.+++.+.+.. ...+.+.++++||+++++
T Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~~ 410 (523)
T 2wdx_A 331 EAVIDGVPPAEVPEPIEQRWLASTPGRGGRGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTV 410 (523)
T ss_dssp HHHHTTCTTCBCCCCEEEETTSSCCCCCSSCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGGS
T ss_pred HHHHhhcCCCccccceeccHHHHHHhhcCCCCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccccC
Confidence 211 100000 00 0 0011245667888777788999999999886532 244678899999999999
Q ss_pred CCCCCCCcccCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhcc------ccccCCCCccccccCCCccCCCCCCCcchh
Q 041546 369 SESETPYPHRAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMT------PYVSENPREAYINYRDLDIGTNNRGHTSIK 442 (490)
Q Consensus 369 ~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~------p~~~~~~~~aY~Ny~d~d~~~~~~~~~s~~ 442 (490)
+.++|+||||+ .+|++++...|.+++.++.+++|++++++.|. |+.+....++|+||+|.+++.+. .++|++
T Consensus 411 ~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~s~~ 488 (523)
T 2wdx_A 411 DPAATALPQRD-AILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPG-LNTSGV 488 (523)
T ss_dssp CTTTSSCCCCS-CSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTT-TCCSSC
T ss_pred CCccccccccC-ceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccccc-cccchh
Confidence 99999999999 68999999999888778889999999999987 43221245799999999876311 234432
Q ss_pred hhhhhhhhhhcccHHHHHHhHhccCCCCCCcCCCCCCC
Q 041546 443 QASIWGSKYFKNNFKRLVHVKTMVDPYDFFKNEQSIPP 480 (490)
Q Consensus 443 ~~~~~g~~yfg~n~~RL~~vK~kyDP~n~F~~~qsI~p 480 (490)
.|.+.|||+||+||++||+||||+|+|+++|||||
T Consensus 489 ---~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 489 ---PWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp ---CHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 59999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=9.4e-60 Score=505.60 Aligned_cols=425 Identities=24% Similarity=0.388 Sum_probs=305.3
Q ss_pred ChhhHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEE
Q 041546 37 DLESLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVR 116 (490)
Q Consensus 37 ~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ 116 (490)
-.-+-..|++.. ...|++|+++.|++.+ +..+|.||. ..|.+||+|++++||+++|++|+++++|+.+|
T Consensus 17 ~~~~~~~~~~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr 85 (521)
T 2ipi_A 17 WEFDGGACGART------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVR 85 (521)
T ss_dssp ------------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhccccccccCC------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 334556788776 4569999999999876 356788884 58999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHH-hhc---------------------cC
Q 041546 117 SGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIA-EKR---------------------YG 174 (490)
Q Consensus 117 ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~-~~g---------------------~G 174 (490)
|||||+.+.+.... ++++|||++|++|++|+++.+|+||+|++|.+|+++|. ++| +|
T Consensus 86 ggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g 164 (521)
T 2ipi_A 86 SGGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWGVTIPAGVCPQVGVGGHVLGGGYG 164 (521)
T ss_dssp SSCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCCCSCTTCBHHHHTTTTCCC
T ss_pred CCCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCCCCCCCcccCCcccCCCCC
Confidence 99999998765432 48999999999999999999999999999999999997 677 78
Q ss_pred CccccccccccceeeeEEEccC--Cceee---ccC-cch--hhhhhhccccCCCceEEEEEEEEEE-----------Eec
Q 041546 175 AMLRKYGLAADNIVDARLTDAN--GRLLD---RKS-MGE--DLFWAIQGGGIGASFGVIVPWKVRL-----------VIV 235 (490)
Q Consensus 175 ~~~~~~G~~~D~v~~~~vV~~~--G~i~~---~~~-~~~--dLf~a~rG~~~~g~fGIIt~~~lkl-----------~p~ 235 (490)
+++++||+++|+|+++|||++| |+++. ... +++ |||||+|||+ +|+|||||+++||+ +|.
T Consensus 165 ~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg-~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 165 PLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGG-GGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSC-SSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred ccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCC-CCceEEEEEEEEEeecccCCCcccccCC
Confidence 8899999999999999999977 98743 221 444 5999999975 59999999999999 998
Q ss_pred CC-eEEEEEEeechh----hHHHHHHHHHhhcccccccCCC---CCCCCC----ccccccceeeeeeecCCCCC-C-chh
Q 041546 236 PS-TVTRFRVSRSLE----QNATKIVHKWQLLPLMQESFPE---LGLTKE----DCIEMSWIESAHDLAGFNKG-D-PLD 301 (490)
Q Consensus 236 p~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~---l~~~~~----~~~~~~~~~s~~~~~g~~~~-~-~~~ 301 (490)
|+ .+..+.+.++.+ +...++++.|+++.... ..|+ .++... ...... +.....+.+.... . .++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~p~~~~~~l~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~ 321 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSN-SAAGTPYASMHSVFYLNSRAAGQ-ILLDIQIDGGLDGAEALLN 321 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHS-CSSSSGGGGCEEEEEEECTTSCE-EEEEEEEETTSTTHHHHHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhc-cCCCccccceEEEEEeccCCCCc-eEEEEEeccCHHHHHHHHH
Confidence 75 466666666432 22346676666532110 0121 111000 000000 1111223332211 1 133
Q ss_pred hhhhcc------cCCcccc-----------ccccCC-CcccccccCCCCCCCHHHHHHHHHHHhhcCCceeEEEEEecCC
Q 041546 302 LLLDRN------SRTNGVA-----------EDAATN-GFFKSKSDYVKQPIPENAFEGIYDNFYEEDGETAFMLLVPYGG 363 (490)
Q Consensus 302 ~ll~~~------~~~~~~~-----------~~~~~~-~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~GG 363 (490)
++++.. +...... ...... .+++.++.++.++++.+.++.+++.+.+.+...+.+.++++||
T Consensus 322 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG 401 (521)
T 2ipi_A 322 DFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDTGGFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGG 401 (521)
T ss_dssp HHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCCTTCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCG
T ss_pred HHHHHHHhhcCCCccceeeecCHHHHHHhhcCCCCCCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCC
Confidence 333321 1000000 000111 3456678888777899999999998877554557888999999
Q ss_pred ccccCCCCCCCCcccCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhcc------ccccCCCCccccccCCCccCCCCCC
Q 041546 364 KMSEISESETPYPHRAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMT------PYVSENPREAYINYRDLDIGTNNRG 437 (490)
Q Consensus 364 ~~~~v~~~~tafphR~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~------p~~~~~~~~aY~Ny~d~d~~~~~~~ 437 (490)
++++++.++|+|+||+ ..|.+++...|.+++.++...+|++++++.|. |+......++|+||+|.+++... .
T Consensus 402 ~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~ 479 (521)
T 2ipi_A 402 KVNSVPETATATAQRD-SIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDER-W 479 (521)
T ss_dssp GGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTT-T
T ss_pred cccCCCCccccccccc-hhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccccc-c
Confidence 9999999999999999 68999999999887778888999999999997 33211245799999999876211 1
Q ss_pred CcchhhhhhhhhhhhcccHHHHHHhHhccCCCCCCcCCCCCCCc
Q 041546 438 HTSIKQASIWGSKYFKNNFKRLVHVKTMVDPYDFFKNEQSIPPL 481 (490)
Q Consensus 438 ~~s~~~~~~~g~~yfg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 481 (490)
++++ ..|.+.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 480 ~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 480 NTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 2222 2589999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=5.7e-59 Score=499.90 Aligned_cols=411 Identities=26% Similarity=0.418 Sum_probs=304.3
Q ss_pred ceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEE
Q 041546 56 KVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVV 135 (490)
Q Consensus 56 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvv 135 (490)
..|++|+++.|++.+. .+|.||. ..|.+||.|++++||+++|++|+++++||.+||||||+.+.+.... ++++
T Consensus 34 ~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gvv 106 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRVV 106 (530)
T ss_dssp CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCEE
T ss_pred ceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeEE
Confidence 4689999999999854 5688874 5899999999999999999999999999999999999988765432 4899
Q ss_pred EEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHh-hc---------------------cCCccccccccccceeeeEEE
Q 041546 136 IDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAE-KR---------------------YGAMLRKYGLAADNIVDARLT 193 (490)
Q Consensus 136 Idl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g---------------------~G~~~~~~G~~~D~v~~~~vV 193 (490)
|||++|++|++|.++.+|+||||+++.+|+++|.+ +| +|+++++||+++|+|+++|||
T Consensus 107 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 186 (530)
T 2y3s_A 107 MDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVV 186 (530)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred EEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEE
Confidence 99999999999999899999999999999999985 77 788999999999999999999
Q ss_pred c--cCCceee---ccC-cch--hhhhhhccccCCCceEEEEEEEEEE------------EecCC-eEEEEEEeechh---
Q 041546 194 D--ANGRLLD---RKS-MGE--DLFWAIQGGGIGASFGVIVPWKVRL------------VIVPS-TVTRFRVSRSLE--- 249 (490)
Q Consensus 194 ~--~~G~i~~---~~~-~~~--dLf~a~rG~~~~g~fGIIt~~~lkl------------~p~p~-~~~~~~~~~~~~--- 249 (490)
+ ++|+++. ... +++ |||||+||++ +|+|||||+++||+ +|.|+ .+..+.+.|+.+
T Consensus 187 ~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g-~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 265 (530)
T 2y3s_A 187 VVDASGDARTVIATREPSDPNHDLWWAHTGGG-GGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLD 265 (530)
T ss_dssp EECTTSCEEEEEEESCTTCTTHHHHHHTTTSC-TTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCC
T ss_pred EecCCCcEEEEeccccccCCChHHHHHHhcCC-CCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccC
Confidence 9 5599742 222 445 5999999986 58999999999999 88875 566666666432
Q ss_pred -hHHHHHHHHHhhcccccccCCCC---CCCC----CccccccceeeeeeecCCCCC-C-chhhhhhcc------cCCccc
Q 041546 250 -QNATKIVHKWQLLPLMQESFPEL---GLTK----EDCIEMSWIESAHDLAGFNKG-D-PLDLLLDRN------SRTNGV 313 (490)
Q Consensus 250 -~~~~~~~~~~~~~~~~~~~~p~l---~~~~----~~~~~~~~~~s~~~~~g~~~~-~-~~~~ll~~~------~~~~~~ 313 (490)
+...++++.|+.+.... ..|+. ++.. ....... +.....+.|.... . .+.++++.. +.....
T Consensus 266 ~~~~~~~l~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~ 343 (530)
T 2y3s_A 266 EAAFARLVRNHGRWFEQN-SGPDSPWCDLYSVLALTRSQSGA-LAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDT 343 (530)
T ss_dssp HHHHHHHHHHHHHHHHHS-CSTTCGGGGEEEEEEEECGGGSE-EEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEE
T ss_pred HHHHHHHHHHHHHHhhhc-CCCCcccceeEEEEEeccCCCCc-EEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcccee
Confidence 23345666665532110 11211 1000 0000000 1111223333221 1 133333211 100000
Q ss_pred ---------c--ccccCC---CcccccccCCCCCCCHHHHHHHHHHHhhcC--CceeEEEEEecCCccccCCCCCCCCcc
Q 041546 314 ---------A--EDAATN---GFFKSKSDYVKQPIPENAFEGIYDNFYEED--GETAFMLLVPYGGKMSEISESETPYPH 377 (490)
Q Consensus 314 ---------~--~~~~~~---~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~--~~~~~~~~~~~GG~~~~v~~~~tafph 377 (490)
. ...... .+++.++.|+.++++++.++.+++.+.+.+ ...+.+.++++||++++++.++|+|||
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~ 423 (530)
T 2y3s_A 344 RRLPWLHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQ 423 (530)
T ss_dssp EEEEHHHHTTCHHHHCCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCC
T ss_pred eeccHHHHHHhhcCCCCCcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCcccc
Confidence 0 000111 256778888877789999999999887642 223678899999999999999999999
Q ss_pred cCCcEEEEEEEEEeCCCccchHHHHHHHHHHHhcc------ccccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhh
Q 041546 378 RAGNIYQILYTVTWGEDETSQSHIDWIRRLYSHMT------PYVSENPREAYINYRDLDIGTNNRGHTSIKQASIWGSKY 451 (490)
Q Consensus 378 R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~------p~~~~~~~~aY~Ny~d~d~~~~~~~~~s~~~~~~~g~~y 451 (490)
|+ ..|.+++...|.+++.++.+.+|++++++.|. |+.+....++|+||+|.+++.+. .++|+ ..|.+.|
T Consensus 424 R~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~y 498 (530)
T 2y3s_A 424 RD-SILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEE-WNTSG---VPWSELY 498 (530)
T ss_dssp CS-CSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHH
T ss_pred cc-cceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccccc-cccch---hHHHHHH
Confidence 99 68999999999888778889999999999987 43211245799999999876321 23443 2599999
Q ss_pred hcccHHHHHHhHhccCCCCCCcCCCCCCCc
Q 041546 452 FKNNFKRLVHVKTMVDPYDFFKNEQSIPPL 481 (490)
Q Consensus 452 fg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 481 (490)
||+||+||++||+||||+|+|+++|+|+|.
T Consensus 499 yg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 499 YKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 999999999999999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=8.6e-58 Score=488.67 Aligned_cols=420 Identities=20% Similarity=0.375 Sum_probs=306.2
Q ss_pred cChhhHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEE
Q 041546 36 ADLESLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRV 115 (490)
Q Consensus 36 ~~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 115 (490)
...+.|.+||... ...++.|+++.|.... ..+|.| ....|.+||+|++++||+++|++|+++++|+.+
T Consensus 4 ~~~~~l~~~l~~~------~~~~~~~~~~~y~~~~--~~~~~~----~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 4 AEFNSINACLAAA------DVEFHEEDSEGWDMDG--TAFNLR----VDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp CTTCHHHHHHHHT------TCEECCTTSHHHHHHT--SCSBGG----GCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhCcC------CceecCCCccchHHHh--hhhhhc----ccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 3456799999865 2357899999998762 344444 456999999999999999999999999999999
Q ss_pred EcCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhhc----------------------c
Q 041546 116 RSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEKR----------------------Y 173 (490)
Q Consensus 116 ~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g----------------------~ 173 (490)
||||||+.+.+.+..+++++|||++|++|++| ++++|+||||+++.+|+++|.++| +
T Consensus 72 ~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~~~vgvgG~~~gGg~ 150 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGY 150 (503)
T ss_dssp ESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCSCTTSBHHHHHHHCCC
T ss_pred ECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCCCCcCchhhhhcCCCC
Confidence 99999998866542224899999999999999 888999999999999999995553 7
Q ss_pred CCccccccccccceeeeEEEccCCceee-ccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeech-hhH
Q 041546 174 GAMLRKYGLAADNIVDARLTDANGRLLD-RKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSL-EQN 251 (490)
Q Consensus 174 G~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~-~~~ 251 (490)
|+++++||+++|+|++++||++||++++ ...+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.+.. .+.
T Consensus 151 g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~--g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 228 (503)
T 1zr6_A 151 GFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG--GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQ 228 (503)
T ss_dssp STTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC--SSSCEEEEEEECCEECCSCEEEEEEEECCCHHH
T ss_pred CcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC--CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHH
Confidence 8889999999999999999999999998 5567899999999999 79999999999999999877766666543 334
Q ss_pred HHHHHHHHhhcccccccCCCCCCCCCccccccceeeeeeecCCCC-CC-chhhhhhcccCC---c---------cc---c
Q 041546 252 ATKIVHKWQLLPLMQESFPELGLTKEDCIEMSWIESAHDLAGFNK-GD-PLDLLLDRNSRT---N---------GV---A 314 (490)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~s~~~~~g~~~-~~-~~~~ll~~~~~~---~---------~~---~ 314 (490)
+.+++..|+.+... ...+++..... .....+.....+.|... .. .+.++++..+.. . .+ .
T Consensus 229 ~~~~~~~~~~~~~~-~~p~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (503)
T 1zr6_A 229 HVAGLKALQDWAQN-TMPRELSMRLE--INANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYL 305 (503)
T ss_dssp HHHHHHHHHHHHHH-TCCTTBCCEEE--EETTEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSC
T ss_pred HHHHHHHHHHHHhh-cCChhHEEEEE--EeCCeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHc
Confidence 56778888764321 11122221000 00000111123344221 11 123333321110 0 00 0
Q ss_pred c----cc--c--CCCcccccccCCCCCCCHHHHHHHHHHHh-hcCC---ceeEEEEEecCC---ccccCCCCCCCCcccC
Q 041546 315 E----DA--A--TNGFFKSKSDYVKQPIPENAFEGIYDNFY-EEDG---ETAFMLLVPYGG---KMSEISESETPYPHRA 379 (490)
Q Consensus 315 ~----~~--~--~~~~~~~~s~~~~~~l~~~~i~~i~~~~~-~~~~---~~~~~~~~~~GG---~~~~v~~~~tafphR~ 379 (490)
. +. . ....|+.++.++.+ ++++.++.+++.+. +.+. ..+.+.++++|| ++.++++++|+|+||+
T Consensus 306 ~~~~~~~~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~ 384 (503)
T 1zr6_A 306 YGADLNITYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD 384 (503)
T ss_dssp TTCCSSCSSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT
T ss_pred CCCcccccCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc
Confidence 0 00 0 11246677888777 88899999999887 5332 225678999999 9999999999999998
Q ss_pred CcEEEEEEEEEe-----CCCccchHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhhhcc
Q 041546 380 GNIYQILYTVTW-----GEDETSQSHIDWIRRLYSHMTPYVSENPREAYINYRDLDIGTNNRGHTSIKQASIWGSKYFKN 454 (490)
Q Consensus 380 ~~~~~i~~~~~w-----~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~aY~Ny~d~d~~~~~~~~~s~~~~~~~g~~yfg~ 454 (490)
..|.+++...| .+++.++...+|++++++.+.........++|+||+|.+++ ...|.+.|||+
T Consensus 385 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~ 452 (503)
T 1zr6_A 385 -QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRG 452 (503)
T ss_dssp -CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGG
T ss_pred -ceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHh
Confidence 57888887776 33344455567777777766544321124799999998765 13688999999
Q ss_pred cHHHHHHhHhccCCCCCCcCCCCCCCccccccc
Q 041546 455 NFKRLVHVKTMVDPYDFFKNEQSIPPLTSWRKK 487 (490)
Q Consensus 455 n~~RL~~vK~kyDP~n~F~~~qsI~p~~~~~~~ 487 (490)
||+||++||+||||+|+|+++|+|+|. .|...
T Consensus 453 n~~RL~~iK~kyDP~~vF~~~~~i~~~-~w~~~ 484 (503)
T 1zr6_A 453 NLEKLQAIKAKYDPEDVFGNVVSVEPI-AYLEQ 484 (503)
T ss_dssp GHHHHHHHHHHHCTTCTTCCTTSCCCC-CC---
T ss_pred HHHHHHHHHHHhCchhhcCCCCCCCch-hhhhh
Confidence 999999999999999999999999885 56543
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=5.9e-56 Score=470.07 Aligned_cols=397 Identities=21% Similarity=0.298 Sum_probs=288.9
Q ss_pred CcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCE
Q 041546 54 ISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPF 133 (490)
Q Consensus 54 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~g 133 (490)
+.+.|++|+++.|+..+. +|+......|.+||+|++++||+++|++|+++++|+.+||||||+.+.+...+ +
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~--g 83 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG--G 83 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS--S
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC--e
Confidence 467899999999998642 35555567999999999999999999999999999999999999988775444 8
Q ss_pred EEEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhhc---------------------cCCccccccccccceeeeEE
Q 041546 134 VVIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEKR---------------------YGAMLRKYGLAADNIVDARL 192 (490)
Q Consensus 134 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g---------------------~G~~~~~~G~~~D~v~~~~v 192 (490)
++|||++|++|++|+++.+|+||||++|.+|+++|.++| +|+++++||+++|+|++++|
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~v 163 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATL 163 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTTEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcCCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEE
Confidence 999999999999999999999999999999999999998 77788999999999999999
Q ss_pred EccCCceee-ccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechhhHHH--HHHHHHhhcccc-ccc
Q 041546 193 TDANGRLLD-RKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNAT--KIVHKWQLLPLM-QES 268 (490)
Q Consensus 193 V~~~G~i~~-~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~ 268 (490)
|++||++++ ...+++||||++|||+ |+|||||+++||++|.|+.+..+.+.++.+ .+. ++++.|+.+... ...
T Consensus 164 V~~~G~i~~~~~~~~~dLf~a~rg~~--g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 164 VTATGDVIYCSDDERPELFWAVRGAG--PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp ECTTSCEEEEESSSSHHHHHHHHHHG--GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTTT
T ss_pred EcCCCeEEEeCCCCChhhHhHhhccC--CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcHh
Confidence 999999997 5567899999999998 999999999999999977777666666643 234 666666653211 100
Q ss_pred -CCCCCCCCCccccccceeeeeeecCCCCC-C-chhhhhhcccC-Ccccc----------cc---c-cCC-Ccccc-ccc
Q 041546 269 -FPELGLTKEDCIEMSWIESAHDLAGFNKG-D-PLDLLLDRNSR-TNGVA----------ED---A-ATN-GFFKS-KSD 328 (490)
Q Consensus 269 -~p~l~~~~~~~~~~~~~~s~~~~~g~~~~-~-~~~~ll~~~~~-~~~~~----------~~---~-~~~-~~~~~-~s~ 328 (490)
++.+ ...........+.....+.|.... . .++++.+..+. ...+. .. . ... ..+.. ++.
T Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (459)
T 2bvf_A 241 IYPSV-FVGVDENRAPSVTVCVGHLGGLDIAERDIARLRGLGRTVSDSIAVRSYDEVVALNAEVGSFEDGMSNLWIDREI 319 (459)
T ss_dssp CCCEE-EEEECTTCCEEEEEEEECCSCHHHHHHHHHHHHTTSCCSEECCEEECHHHHHHHHHHHSCCCCSCEEEEEEEEE
T ss_pred hcccc-ccCcccCCCceEEEEEEEeCCHHHHHHHHHHHHHhCcchhcceeecCHHHHHhcccccccCCCCCcceEecccc
Confidence 1111 000000000001111223332110 0 12222221110 00000 00 0 111 12222 566
Q ss_pred CCCCCCCHHHHHHHHHHHhhcC-CceeEEEEEecCCccccCCCCCCCCcccCCcEEEEEEEEEeCCCc-cchHHHHHHHH
Q 041546 329 YVKQPIPENAFEGIYDNFYEED-GETAFMLLVPYGGKMSEISESETPYPHRAGNIYQILYTVTWGEDE-TSQSHIDWIRR 406 (490)
Q Consensus 329 ~~~~~l~~~~i~~i~~~~~~~~-~~~~~~~~~~~GG~~~~v~~~~tafphR~~~~~~i~~~~~w~~~~-~~~~~~~wi~~ 406 (490)
++.+.++.+.++.+++.+.+.+ ... .+.++.+||++.+ .++|||+||+. .| +++...|.+++ .++.+.+|+++
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~~~~~~~~~~~~~ 394 (459)
T 2bvf_A 320 AMPNARFAEAIAGNLDKFVSEPASGG-SVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALAEWSGAAPGSEKYPELARE 394 (459)
T ss_dssp CSCHHHHHHHHHTTGGGCEEETTTTE-EEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTSTTTTHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhhCCCCCc-eeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEEEeCCCccchHHHHHHHHH
Confidence 6653355667777777665544 321 2233444888877 66899999995 67 88999998775 67778999999
Q ss_pred HHHhccccccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhhhccc-HHHHHHhHhccCCCCCCcCCCCCCC
Q 041546 407 LYSHMTPYVSENPREAYINYRDLDIGTNNRGHTSIKQASIWGSKYFKNN-FKRLVHVKTMVDPYDFFKNEQSIPP 480 (490)
Q Consensus 407 ~~~~l~p~~~~~~~~aY~Ny~d~d~~~~~~~~~s~~~~~~~g~~yfg~n-~~RL~~vK~kyDP~n~F~~~qsI~p 480 (490)
+++.|.|+......|+|+||+|.+.. .|...|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 395 ~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 395 LDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred HHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 99999998521135799999997632 6889999986 9999999999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.1e-36 Score=327.96 Aligned_cols=206 Identities=16% Similarity=0.221 Sum_probs=159.0
Q ss_pred cChhhHHHHHhcCCCCCCCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHh--c-CCc
Q 041546 36 ADLESLIQCLSMHSDNSSISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKK--H-GLQ 112 (490)
Q Consensus 36 ~~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~--~-~~~ 112 (490)
....+|++||.... +.+.|.+ +...+... ...|+......|.+||+|++++||+++|++|++ + ++|
T Consensus 29 ~~~~~~~~~l~~~~----~~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 29 DRGRPWPASLAALA----LDGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp -----------CTT----TTTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred cchHHHHHHHHhcC----CCceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 35567889998732 2345554 22223221 223555456789999999999999999999998 6 999
Q ss_pred EEEEcCCCCCCCCccccCCCEEEEEcCCCCcE------EEeCCCCEEEEcCCCChHHHHHHHHhhc--------------
Q 041546 113 IRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEI------SVDAAEQTAWVQAGATLGQLYYRIAEKR-------------- 172 (490)
Q Consensus 113 v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i------~vd~~~~~v~v~aG~~~~~l~~~l~~~g-------------- 172 (490)
+.++|||||+.|.+.+.+ +++|||++|++| ++|.++.+|+||||+++.+|++++.++|
T Consensus 98 v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tv 175 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTV 175 (534)
T ss_dssp EEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBH
T ss_pred EEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEe
Confidence 999999999998887654 999999999984 7888888999999999999999999998
Q ss_pred --------cCCccccccccccceeeeEEEccCCceee-ccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEE
Q 041546 173 --------YGAMLRKYGLAADNIVDARLTDANGRLLD-RKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFR 243 (490)
Q Consensus 173 --------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~ 243 (490)
+|..+++||.++|+|++++||++||++++ ...+++||||++|||+ |+|||||+++|||+|.|+....+.
T Consensus 176 GG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~--G~~GIVt~~~l~l~p~~~~~~~~~ 253 (534)
T 1w1o_A 176 GGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL--GQFGVITRARIAVEPAPARARWVR 253 (534)
T ss_dssp HHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT--TCSEEEEEEEEEEEECCSEEEEEE
T ss_pred ceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC--CCcEEEEEEEEEEEECCcceEEEE
Confidence 45556789999999999999999999997 5567899999999999 899999999999999998776666
Q ss_pred EeechhhHHHHHH
Q 041546 244 VSRSLEQNATKIV 256 (490)
Q Consensus 244 ~~~~~~~~~~~~~ 256 (490)
+.+...+.+.+.+
T Consensus 254 ~~~~~~~~~~~~~ 266 (534)
T 1w1o_A 254 FVYTDFAAFSADQ 266 (534)
T ss_dssp EEESCHHHHHHHH
T ss_pred EEeCCHHHHHHHH
Confidence 6665433444433
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.97 E-value=2.2e-29 Score=270.10 Aligned_cols=178 Identities=22% Similarity=0.349 Sum_probs=150.0
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEEEeC-----CC-
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKK-HGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDA-----AE- 150 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~-----~~- 150 (490)
.|.......|.+||+|+|++||+++|++|++ +++|+.+||||||+.|.+.+.+ +|+|||++||+|++|. ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3554455689999999999999999999996 9999999999999998876654 8999999999987776 45
Q ss_pred -CEEEEcCCCChHHHHHHHH-hhc----------------------cCCccccccccccceeeeEEEccCCceee-ccCc
Q 041546 151 -QTAWVQAGATLGQLYYRIA-EKR----------------------YGAMLRKYGLAADNIVDARLTDANGRLLD-RKSM 205 (490)
Q Consensus 151 -~~v~v~aG~~~~~l~~~l~-~~g----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~ 205 (490)
.+|+||||+++.++++++. ++| .|..+.+||.++|+|++++||++||++++ ....
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~ 210 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIE 210 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSS
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCC
Confidence 7999999999999876655 887 35556789999999999999999999997 4457
Q ss_pred chhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechhhHHHHHHHHH
Q 041546 206 GEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNATKIVHKW 259 (490)
Q Consensus 206 ~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (490)
++||||++|||+ |+|||||+++|||+|.|+....+.+.+...+.+.+.+...
T Consensus 211 ~~dL~~~~~Gs~--GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l 262 (524)
T 2exr_A 211 NSELFFSVLGGL--GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWL 262 (524)
T ss_dssp SHHHHHHHTTCT--TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred ChhHHhHhhcCC--CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHH
Confidence 899999999999 9999999999999999997776667665444444444433
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.97 E-value=1.5e-28 Score=260.63 Aligned_cols=158 Identities=20% Similarity=0.288 Sum_probs=141.9
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhc--CCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcE-EEeCCCCEEE
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKH--GLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEI-SVDAAEQTAW 154 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~--~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~ 154 (490)
.|.. ....|.+|++|++++||+++|++|+++ ++|+.++|+|||+.+.+... +|++|||++|++| ++|.++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4744 477899999999999999999999999 79999999999997655433 4999999999998 9999999999
Q ss_pred EcCCCChHHHHHHHHhhc----------------------cCCccccccccccceeeeEEEccCCceee-ccC-cchhhh
Q 041546 155 VQAGATLGQLYYRIAEKR----------------------YGAMLRKYGLAADNIVDARLTDANGRLLD-RKS-MGEDLF 210 (490)
Q Consensus 155 v~aG~~~~~l~~~l~~~g----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~-~~~dLf 210 (490)
||||+++.+|+++|.++| +|.+++.||.++|+|+++++|++||++++ +.. +++|||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dLf 191 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAELF 191 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHHH
Confidence 999999999999999999 55666889999999999999999999998 445 789999
Q ss_pred hhhccccCCCceEEEEEEEEEEEecCCeEE
Q 041546 211 WAIQGGGIGASFGVIVPWKVRLVIVPSTVT 240 (490)
Q Consensus 211 ~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~ 240 (490)
|++|||+ |++||||+++||++|.|+...
T Consensus 192 ~a~rgs~--G~~GIIt~~tl~l~p~~~~~~ 219 (481)
T 4feh_A 192 WATVGGN--GLTGIIMRATIEMTPTSTAYF 219 (481)
T ss_dssp HHHTTCT--TTTCEEEEEEEECEECSCSEE
T ss_pred HHhhccC--CCceEEEEEEEEEEeCCccEE
Confidence 9999999 999999999999999986543
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.96 E-value=2.9e-29 Score=276.03 Aligned_cols=217 Identities=19% Similarity=0.216 Sum_probs=172.4
Q ss_pred cChhhHHHHHhcCCCC-C-CCcceEecCCCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcE
Q 041546 36 ADLESLIQCLSMHSDN-S-SISKVIYTQINSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQI 113 (490)
Q Consensus 36 ~~~~~~~~~l~~~~~~-~-~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v 113 (490)
...++|+..|...... + +-...+.-.-..+|.+.+. .++..| ...|.+||+|+|++||+++|++|+++++||
T Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~r~~h~~g~s~~d~~~--~~~g~~----~~~P~aVV~P~s~eeV~~iv~~A~~~~ipV 232 (658)
T 4bby_A 159 IVNEDFLHELKKTNISYSQEADDRVFRAHGHCLHEIFL--LREGMF----ERIPDIVLWPTCHDDVVKIVNLACKYNLCI 232 (658)
T ss_dssp CCCHHHHHHHHHHTCEEECCHHHHHHTSCCSCHHHHHH--HHSSCC----SCCCSEEEECCSHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHhcccccCchHHHhhhcCCCCHHHHHH--HhCCcc----cCCcCEEEeeCCHHHHHHHHHHHHHCCCeE
Confidence 3456788777654210 0 0111222223345665543 333344 568999999999999999999999999999
Q ss_pred EEEcCCCCCCCCcccc---CCCEEEEEcCCCCcE-EEeCCCCEEEEcCCCChHHHHHHHHhhc-----------------
Q 041546 114 RVRSGGHDFEGLSYVS---HVPFVVIDLLNLSEI-SVDAAEQTAWVQAGATLGQLYYRIAEKR----------------- 172 (490)
Q Consensus 114 ~v~ggGh~~~g~~~~~---~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~g----------------- 172 (490)
.++||||++.|...+. ..++|+|||++||+| +||+++.+|+||||+++.+|.++|.++|
T Consensus 233 vprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG 312 (658)
T 4bby_A 233 IPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGG 312 (658)
T ss_dssp EEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHH
T ss_pred EEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEee
Confidence 9999999987655432 135899999999997 8999999999999999999999999999
Q ss_pred ------cCCccccccccccceeeeEEEccCCceee-----ccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEE
Q 041546 173 ------YGAMLRKYGLAADNIVDARLTDANGRLLD-----RKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTR 241 (490)
Q Consensus 173 ------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~-----~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~ 241 (490)
.|+.+.+||.+.|+|+++|||++||++++ ....++||+|+++||+ |+|||||+++|||+|.|+....
T Consensus 313 ~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSE--GTLGIITeatLrL~P~P~~~~~ 390 (658)
T 4bby_A 313 WISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSE--GTLGVITEATIKIRPTPEYQKY 390 (658)
T ss_dssp HHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCT--TSSCEEEEEEEECEECCSEEEE
T ss_pred hhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCC--CcCcceeeeeeeeccCCccccc
Confidence 67888999999999999999999999985 2456799999999999 9999999999999999998777
Q ss_pred EEEeechhhHHHHHHHHHh
Q 041546 242 FRVSRSLEQNATKIVHKWQ 260 (490)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (490)
+.+.+...+++.+++....
T Consensus 391 ~~~~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 391 GSVAFPNFEQGVACLREIA 409 (658)
T ss_dssp EEEEESSHHHHHHHHHHHH
T ss_pred cccccCCchhhhhhHHHHH
Confidence 7777765555666665543
No 15
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.96 E-value=2.4e-28 Score=258.83 Aligned_cols=180 Identities=23% Similarity=0.289 Sum_probs=157.4
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcE-EEeCCCCEEEEc
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEI-SVDAAEQTAWVQ 156 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~ 156 (490)
.|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... ++|+|||++|++| ++|.++.+|+||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 45544467899999999999999999999999999999999999998877643 5899999999998 799999999999
Q ss_pred CCCChHHHHHHHHhhc-----------------------cCCccccccccccceeeeEEEccCCceee------ccCcch
Q 041546 157 AGATLGQLYYRIAEKR-----------------------YGAMLRKYGLAADNIVDARLTDANGRLLD------RKSMGE 207 (490)
Q Consensus 157 aG~~~~~l~~~l~~~g-----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~------~~~~~~ 207 (490)
||+++.+|++++.++| .|..+.+||.++|+|++++||++||++++ ....++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 9999999999999999 56667789999999999999999999986 234578
Q ss_pred hhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEeechhhHHHHHHHHHh
Q 041546 208 DLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNATKIVHKWQ 260 (490)
Q Consensus 208 dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (490)
||+|+++|++ |+|||||+++|||+|.|+....+.+.+...+.+.+++..++
T Consensus 202 dl~~l~~Gs~--GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 252 (476)
T 3pm9_A 202 DLRDLFIGAE--GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQ 252 (476)
T ss_dssp CCHHHHTTST--TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHhccCC--CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHH
Confidence 9999999999 99999999999999999977766666665556666666664
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.95 E-value=1.9e-26 Score=241.39 Aligned_cols=154 Identities=19% Similarity=0.247 Sum_probs=135.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcE-EEeCCCCEEEEc
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEI-SVDAAEQTAWVQ 156 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~ 156 (490)
.|+......|.+|++|+|++||+++|++| +|+.++||||++.+..... .++++|||++|++| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 36666667999999999999999999998 8999999999988877631 24899999999997 899999999999
Q ss_pred CCCChHHHHHHHHhhc----------------------cCCccccccccccceeeeEEEccCCceee-ccCcchhhhhhh
Q 041546 157 AGATLGQLYYRIAEKR----------------------YGAMLRKYGLAADNIVDARLTDANGRLLD-RKSMGEDLFWAI 213 (490)
Q Consensus 157 aG~~~~~l~~~l~~~g----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dLf~a~ 213 (490)
||+++.+|.++|.++| +|.. .+||.++|+|+++++|++||++++ ...+++ ||++
T Consensus 87 aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~~~ 163 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FGGA 163 (422)
T ss_dssp TTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GGGT
T ss_pred CCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cceE
Confidence 9999999999999999 5554 689999999999999999999997 434444 8999
Q ss_pred ccccCCCceEEEEEEEEEEEecCCeEEE
Q 041546 214 QGGGIGASFGVIVPWKVRLVIVPSTVTR 241 (490)
Q Consensus 214 rG~~~~g~fGIIt~~~lkl~p~p~~~~~ 241 (490)
+|++ |++||||+++||++|.|+....
T Consensus 164 ~g~~--G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 164 VTSL--GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp SSCT--TTTCEEEEEEEECEECCEEEEE
T ss_pred EecC--CCCEEEEEEEEEEEecCceEEE
Confidence 9999 9999999999999999875433
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.95 E-value=3.5e-27 Score=255.40 Aligned_cols=176 Identities=22% Similarity=0.268 Sum_probs=151.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccC--CCEEEEEcCCCCcE-EEeCCCCEEEEcCCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSH--VPFVVIDLLNLSEI-SVDAAEQTAWVQAGAT 160 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~--~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~ 160 (490)
...|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.... .++|+|||++||+| ++|+++.+|+||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 45899999999999999999999999999999999999987665431 25899999999998 8999999999999999
Q ss_pred hHHHHHHHHhhc-----------------------cCCccccccccccceeeeEEEccCCceee----ccCcchhhhhhh
Q 041546 161 LGQLYYRIAEKR-----------------------YGAMLRKYGLAADNIVDARLTDANGRLLD----RKSMGEDLFWAI 213 (490)
Q Consensus 161 ~~~l~~~l~~~g-----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~----~~~~~~dLf~a~ 213 (490)
+.+|+++|.++| +|+.+.+||.++|+|++++||++||++++ ....++||+|++
T Consensus 215 ~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~ 294 (584)
T 2uuu_A 215 GPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHII 294 (584)
T ss_dssp HHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHH
T ss_pred HHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhh
Confidence 999999999998 45666789999999999999999999886 345789999999
Q ss_pred ccccCCCceEEEEEEEEEEEecCCeEEEEEEeechhhHHHHHHHHHhh
Q 041546 214 QGGGIGASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNATKIVHKWQL 261 (490)
Q Consensus 214 rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (490)
+|++ |+|||||+++|||+|.|+....+.+.+...+.+.+++..+..
T Consensus 295 ~Gse--GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 295 LGSE--GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp TTCT--TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred ccCC--CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 9999 999999999999999999777777777655556666665543
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=3.6e-26 Score=245.29 Aligned_cols=176 Identities=26% Similarity=0.347 Sum_probs=144.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCccccCCCEEEEEcCCCCcE-EEeCCCCEEEEcCCCCh
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFE-GLSYVSHVPFVVIDLLNLSEI-SVDAAEQTAWVQAGATL 161 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~-g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~ 161 (490)
...|.+||+|+|++||+++|++|+++++|+.++|||||+. |.+.....++|+|||++||+| ++|+++.+|+||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4579999999999999999999999999999999999986 654431124999999999998 99999999999999999
Q ss_pred HHHHHHHHhhc----------------------cCCccccccccccceeeeEEEccCCceeecc---Ccchhhhhhhccc
Q 041546 162 GQLYYRIAEKR----------------------YGAMLRKYGLAADNIVDARLTDANGRLLDRK---SMGEDLFWAIQGG 216 (490)
Q Consensus 162 ~~l~~~l~~~g----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~~~---~~~~dLf~a~rG~ 216 (490)
.+|+++|.++| .|....+||.++|+|++++||++||++++.. ..++|+|++.+|+
T Consensus 134 ~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~ 213 (520)
T 1wvf_A 134 GQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWG 213 (520)
T ss_dssp HHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSSTTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCC
T ss_pred HHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCccccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCC
Confidence 99999999998 1122246899999999999999999999732 3567887776666
Q ss_pred cCC---------CceEEEEEEEEEEEecCCeEEEEEEeechhhHHHHHHHHHh
Q 041546 217 GIG---------ASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNATKIVHKWQ 260 (490)
Q Consensus 217 ~~~---------g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (490)
. | ++|||||+++|||+|.|+....+.+.+...+.+.+++..++
T Consensus 214 ~-Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~ 265 (520)
T 1wvf_A 214 Y-GPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALR 265 (520)
T ss_dssp S-SCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHH
T ss_pred C-CcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 4 2 48999999999999999987777777765445555444444
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.93 E-value=2.4e-25 Score=240.62 Aligned_cols=178 Identities=13% Similarity=0.105 Sum_probs=148.9
Q ss_pred cceEecC-CCCChHHHhhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccC---
Q 041546 55 SKVIYTQ-INSSYSSVLNFSIQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSH--- 130 (490)
Q Consensus 55 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~--- 130 (490)
++.+++| +++.|.... ..|+......|.+|+.|++++||+++|++|+++++|++++|||||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4557788 999999752 247666667899999999999999999999999999999999999865432211
Q ss_pred CCEEEEEc-CCCCcEEEeC--CCCEEEEcCCCChHHHHHHHHhhc----------------------cCCc---------
Q 041546 131 VPFVVIDL-LNLSEISVDA--AEQTAWVQAGATLGQLYYRIAEKR----------------------YGAM--------- 176 (490)
Q Consensus 131 ~~gvvIdl-~~l~~i~vd~--~~~~v~v~aG~~~~~l~~~l~~~g----------------------~G~~--------- 176 (490)
.++++||| ++|++|++|+ ++++|+||||+++.+|+++|.++| +|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~ 162 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTL 162 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccc
Confidence 24899999 8999999998 788999999999999999999999 3443
Q ss_pred -cccccccccceeeeEEEccCCc---eeeccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEE
Q 041546 177 -LRKYGLAADNIVDARLTDANGR---LLDRKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRF 242 (490)
Q Consensus 177 -~~~~G~~~D~v~~~~vV~~~G~---i~~~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~ 242 (490)
+.+||.++|+|++++||++||+ +++...+++||+|+++|.| . ||||+++|||+|.|+.....
T Consensus 163 s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~--giIt~~tl~l~p~~~~~~~~ 228 (561)
T 2i0k_A 163 PGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R--CFLTSVTMQAGPNFRQRCQS 228 (561)
T ss_dssp TTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S--SCEEEEEEECEECCEEEEEE
T ss_pred cccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C--EEEEEEEEEEEECCceEEEE
Confidence 5679999999999999999999 6654445789999998655 4 89999999999998754443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.92 E-value=4.8e-24 Score=230.53 Aligned_cols=177 Identities=18% Similarity=0.190 Sum_probs=143.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCccccCCCEEEEEc-CCCCcE-EEeCCCCEEEEcCCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFE-GLSYVSHVPFVVIDL-LNLSEI-SVDAAEQTAWVQAGAT 160 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~-g~~~~~~~~gvvIdl-~~l~~i-~vd~~~~~v~v~aG~~ 160 (490)
...|.+||+|+|++||+++|++|+++++|+.+||+|||+. |...+...++|+||| ++||+| ++|+++.+|+||||++
T Consensus 68 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~ 147 (560)
T 1e8g_A 68 YFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVT 147 (560)
T ss_dssp SSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCB
T ss_pred ccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCC
Confidence 4579999999999999999999999999999999999985 554431124999999 999998 9999999999999999
Q ss_pred hHHHHHHHHhhc-----------------------cCCccccccccccceeeeEEEccCCceeeccC---cch-------
Q 041546 161 LGQLYYRIAEKR-----------------------YGAMLRKYGLAADNIVDARLTDANGRLLDRKS---MGE------- 207 (490)
Q Consensus 161 ~~~l~~~l~~~g-----------------------~G~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~---~~~------- 207 (490)
+.+|.++|.++| .|...++||..+|+|++++||++||++++... .++
T Consensus 148 ~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~ 227 (560)
T 1e8g_A 148 YHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYTPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMG 227 (560)
T ss_dssp HHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSSTTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTT
T ss_pred HHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcccceeHHHheeeeEEEeCCCCEEEecCcccCccccccccc
Confidence 999999999987 12223478999999999999999999997321 221
Q ss_pred --------hhhhhhccccC---------CCceEEEEEEEEEEEecCCeEEEEEEeechhhHHHHHHHHHh
Q 041546 208 --------DLFWAIQGGGI---------GASFGVIVPWKVRLVIVPSTVTRFRVSRSLEQNATKIVHKWQ 260 (490)
Q Consensus 208 --------dLf~a~rG~~~---------~g~fGIIt~~~lkl~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (490)
+++|+++++++ +|+|||||+++|||+|.|+....+.+.+...+.+.+++..++
T Consensus 228 ~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 297 (560)
T 1e8g_A 228 LKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIR 297 (560)
T ss_dssp CCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHH
T ss_pred chhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHH
Confidence 66777765421 379999999999999999987777777765455555554443
No 21
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.92 E-value=9.9e-25 Score=234.94 Aligned_cols=173 Identities=13% Similarity=0.125 Sum_probs=148.1
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCC----CEEEEEcCCCCcE-EEeCCCCEEEEcCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHV----PFVVIDLLNLSEI-SVDAAEQTAWVQAG 158 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~----~gvvIdl~~l~~i-~vd~~~~~v~v~aG 158 (490)
...|.+||+|+|++||+++|++|+++++||.++||||++.|.+.+.+. ++|+|||++||+| ++|+ +++|+||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 468999999999999999999999999999999999999887766431 3899999999998 7984 579999999
Q ss_pred CChHHHHHHHHhhc------------------------cCCcccccccccc----------------ceeeeEEEccCCc
Q 041546 159 ATLGQLYYRIAEKR------------------------YGAMLRKYGLAAD----------------NIVDARLTDANGR 198 (490)
Q Consensus 159 ~~~~~l~~~l~~~g------------------------~G~~~~~~G~~~D----------------~v~~~~vV~~~G~ 198 (490)
+++.+|.++|.++| +|..+.+||..+| +|++++||+++|+
T Consensus 122 v~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~ 201 (571)
T 1f0x_A 122 TTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQ 201 (571)
T ss_dssp CBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHH
T ss_pred cCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCc
Confidence 99999999999998 4556778999999 9999999999999
Q ss_pred eee-c-----------------cCcch-----------------hhhhhh--ccccCCCceEEEEEEEEEEEecCCeEEE
Q 041546 199 LLD-R-----------------KSMGE-----------------DLFWAI--QGGGIGASFGVIVPWKVRLVIVPSTVTR 241 (490)
Q Consensus 199 i~~-~-----------------~~~~~-----------------dLf~a~--rG~~~~g~fGIIt~~~lkl~p~p~~~~~ 241 (490)
+++ . ...++ ||+|++ +||+ |+||| |+++|||+|.|+....
T Consensus 202 i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse--GtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 202 ILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA--GKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT--TSSEE-EEEEEECEECCSSCEE
T ss_pred EEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC--CceeE-EEEEEEEEecCCeEEE
Confidence 885 2 12234 988888 9999 99999 9999999999998777
Q ss_pred EEEeechhhHHHHHHHHHh
Q 041546 242 FRVSRSLEQNATKIVHKWQ 260 (490)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (490)
+.+.+...+.+.+++..+.
T Consensus 279 ~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 7777765555666666665
No 22
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.91 E-value=3.2e-24 Score=227.98 Aligned_cols=158 Identities=16% Similarity=0.179 Sum_probs=132.0
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccc---cCCCEEEEEcC-CCCcEEEeCC--CC
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYV---SHVPFVVIDLL-NLSEISVDAA--EQ 151 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~---~~~~gvvIdl~-~l~~i~vd~~--~~ 151 (490)
.|+......|.+|++|+|++||+++|++|+++++||+++|||||+.+.... ...++|+|||+ +|++|++|.+ ..
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 377777789999999999999999999999999999999999998522211 11258999995 7999999975 57
Q ss_pred EEEEcCCCChHHHHHHHHhhc----------------------cCCc----------cccccccccceeeeEEEccCCc-
Q 041546 152 TAWVQAGATLGQLYYRIAEKR----------------------YGAM----------LRKYGLAADNIVDARLTDANGR- 198 (490)
Q Consensus 152 ~v~v~aG~~~~~l~~~l~~~g----------------------~G~~----------~~~~G~~~D~v~~~~vV~~~G~- 198 (490)
+|+||||+++.+|+++|.++| +|.. +++||.++|+|++++||++||+
T Consensus 101 tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~~ 180 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKAS 180 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTT
T ss_pred EEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCCC
Confidence 999999999999999999999 3443 4689999999999999999998
Q ss_pred ----eeeccCcchhhhhhhccccCCCceEEEEEEEEEEEecCCeE
Q 041546 199 ----LLDRKSMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTV 239 (490)
Q Consensus 199 ----i~~~~~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~ 239 (490)
+++.+.+++|| |++|+|. |. ||||+++||++|.++..
T Consensus 181 ~~~~i~~~s~~~~DL-~a~r~G~--G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 181 GAYALRKFARNDPQI-APLLAHV--GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TEEEEEEEETTSGGG-HHHHTCT--TS-SCEEEEEEEEEECCEEE
T ss_pred ceeeEEEeCCCChhH-HHHHhcC--CC-eEEEEEEEEEEECCceE
Confidence 66644467898 5666666 55 59999999999998643
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.91 E-value=3.4e-24 Score=215.54 Aligned_cols=148 Identities=15% Similarity=0.128 Sum_probs=128.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHH
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQ 163 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~ 163 (490)
...|.++|+|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++|++|++| +.+|+||||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 45899999999999999999999999999999999999887665544 999999999999886 46999999999999
Q ss_pred HHHHHHhhc-----------------cCCccccc-cccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEE
Q 041546 164 LYYRIAEKR-----------------YGAMLRKY-GLAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVI 225 (490)
Q Consensus 164 l~~~l~~~g-----------------~G~~~~~~-G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGII 225 (490)
|++++.++| ..++++.| |.++|+|+++++|+++|++++... +|++|+||++.|++.+|||
T Consensus 128 l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~~--~~~~~~yR~s~~g~~~~II 205 (322)
T 3tx1_A 128 TAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKR--SELKAAYRFSTIAEKNYIV 205 (322)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEEG--GGCC--CC-CTTTGGGCEE
T ss_pred HHHHHHHcCCcccccCCCCcchhHHHHHhCccCcccchHhhEEEEEEEcCCCCEEEech--HHcCcchhhcccCCCCEEE
Confidence 999999999 22446778 588999999999999999998433 5999999999866678999
Q ss_pred EEEEEEEEecCC
Q 041546 226 VPWKVRLVIVPS 237 (490)
Q Consensus 226 t~~~lkl~p~p~ 237 (490)
|+++|||.|.|+
T Consensus 206 t~~tl~L~p~~~ 217 (322)
T 3tx1_A 206 LDATFSLALEEK 217 (322)
T ss_dssp EEEEEECEECCH
T ss_pred EEEEEEEEeCCH
Confidence 999999999873
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.89 E-value=2.1e-23 Score=211.94 Aligned_cols=149 Identities=10% Similarity=0.013 Sum_probs=132.3
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEEEeC--CCCEEEEcCCCC
Q 041546 83 NTPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDA--AEQTAWVQAGAT 160 (490)
Q Consensus 83 ~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~--~~~~v~v~aG~~ 160 (490)
....|.++|+|+|++||+++|++|+++++|+.++|||||.++.+. .+ |+||+++ |++|+++. ++.+++|+||++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 345788999999999999999999999999999999999987776 55 9999998 99998753 456899999999
Q ss_pred hHHHHHHHHhhc-----------------cCCccccccc-cccceeeeEEEcc-CCceeeccCcchhhhhhhccccCC--
Q 041546 161 LGQLYYRIAEKR-----------------YGAMLRKYGL-AADNIVDARLTDA-NGRLLDRKSMGEDLFWAIQGGGIG-- 219 (490)
Q Consensus 161 ~~~l~~~l~~~g-----------------~G~~~~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dLf~a~rG~~~~-- 219 (490)
|.+|.+++.++| .+++++.||. ++|+|+++++|++ +|++++... .|++|+||++.|.
T Consensus 103 ~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~--~dl~f~YR~s~~~~~ 180 (357)
T 3i99_A 103 WPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTM--EECQFGYRDSIFKHQ 180 (357)
T ss_dssp HHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGCCBTTBCGGGTT
T ss_pred HHHHHHHHHHcCCcCccccCCCCchhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeH--HHcCcccccccCCCc
Confidence 999999999999 6678899997 8999999999998 999998543 4999999999854
Q ss_pred -CceEEEEEEEEEEEecCC
Q 041546 220 -ASFGVIVPWKVRLVIVPS 237 (490)
Q Consensus 220 -g~fGIIt~~~lkl~p~p~ 237 (490)
+++||||+++|||+|.++
T Consensus 181 ~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 181 LYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TTTTEEEEEEEEEEESSCC
T ss_pred cCCCEEEEEEEEEEEeCCc
Confidence 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.89 E-value=2.6e-23 Score=210.11 Aligned_cols=146 Identities=19% Similarity=0.160 Sum_probs=127.6
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHH
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQ 163 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~ 163 (490)
...|.++++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++|++|++| +.+++||||+++.+
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHHH
Confidence 45799999999999999999999999999999999999887766554 999999999999887 47999999999999
Q ss_pred HHHHHHhhc-----------------cCCcccccc-ccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEE
Q 041546 164 LYYRIAEKR-----------------YGAMLRKYG-LAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVI 225 (490)
Q Consensus 164 l~~~l~~~g-----------------~G~~~~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGII 225 (490)
|++++.++| +.++++.|| .++|+|+++++|+++|++++.... |++|+||++.|++..|||
T Consensus 122 l~~~l~~~Gl~gLe~~~~~PgtvGG~i~~naggyG~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~~~l~s~ggII 199 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQKEHLVV 199 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHHHTTCEE
T ss_pred HHHHHHHCCCccccccCCCcchhhHHHhcccccCchhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccccccCCCCEEE
Confidence 999999998 234566799 999999999999999999874443 899999986532222999
Q ss_pred EEEEEEEEec
Q 041546 226 VPWKVRLVIV 235 (490)
Q Consensus 226 t~~~lkl~p~ 235 (490)
|+++|||+|.
T Consensus 200 t~~~l~l~p~ 209 (326)
T 1hsk_A 200 LEAAFTLAPG 209 (326)
T ss_dssp EEEEEECEEC
T ss_pred EEEEEEEEcC
Confidence 9999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.88 E-value=4.7e-22 Score=201.39 Aligned_cols=148 Identities=16% Similarity=0.075 Sum_probs=130.3
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEE-EeCCC-CEEEEcCCCCh
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEIS-VDAAE-QTAWVQAGATL 161 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~-vd~~~-~~v~v~aG~~~ 161 (490)
...|.++++|+|++||+++|++|+++++|+.++|||||+++.+. .+ |+||+++ |+.|. ++.++ .+++|+||++|
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 35689999999999999999999999999999999999887764 44 9999996 99985 56565 68999999999
Q ss_pred HHHHHHHHhhc-----------------cCCccccccc-cccceeeeEEEcc-CCceeeccCcchhhhhhhccccCCC--
Q 041546 162 GQLYYRIAEKR-----------------YGAMLRKYGL-AADNIVDARLTDA-NGRLLDRKSMGEDLFWAIQGGGIGA-- 220 (490)
Q Consensus 162 ~~l~~~l~~~g-----------------~G~~~~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dLf~a~rG~~~~g-- 220 (490)
.+|.+++.++| ..++++.||. ++|+|+++++|++ +|++++... .|++|+||++.|.+
T Consensus 88 ~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~--~d~~~gYR~s~~~~~~ 165 (340)
T 1uxy_A 88 HRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA--KECRFGYRDSIFKHEY 165 (340)
T ss_dssp HHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGTCBTTBCGGGTTT
T ss_pred HHHHHHHHHCCCCccccccCCccchhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH--HHhccccCcCccCCcC
Confidence 99999999998 5677899995 8999999999996 999988543 59999999997544
Q ss_pred -ceEEEEEEEEEEEecCC
Q 041546 221 -SFGVIVPWKVRLVIVPS 237 (490)
Q Consensus 221 -~fGIIt~~~lkl~p~p~ 237 (490)
++||||+++|||.|.|+
T Consensus 166 ~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 166 QDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TTTEEEEEEEEEEESSCC
T ss_pred CCCEEEEEEEEEEEcCCC
Confidence 59999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.82 E-value=2.6e-20 Score=182.43 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=117.8
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCcEEEeCCCCEEEEcCCCChHHH
Q 041546 85 PKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSEISVDAAEQTAWVQAGATLGQL 164 (490)
Q Consensus 85 ~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l 164 (490)
..|. +|+|+|++||+++| ++|+.++|+|||+++.+.+.+ +|+||++++|++|++| + +|+||++|.+|
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l 87 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLL 87 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHH
Confidence 3566 99999999999999 899999999999988776553 4899999999999865 2 99999999999
Q ss_pred HHHHHhhc-----------------cCCcccccc-ccccceeeeEEEccCCceeeccCcchhhhhhhccccCCCceEEEE
Q 041546 165 YYRIAEKR-----------------YGAMLRKYG-LAADNIVDARLTDANGRLLDRKSMGEDLFWAIQGGGIGASFGVIV 226 (490)
Q Consensus 165 ~~~l~~~g-----------------~G~~~~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~~g~fGIIt 226 (490)
.+++.++| .+++++.|| .++|+|+++++| ++|++++... .|++|+||++.|.+. ||||
T Consensus 88 ~~~~~~~Gl~Gle~~~giPGtvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~~~~-gIVt 163 (268)
T 2gqt_A 88 VQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHLPPG-GIVT 163 (268)
T ss_dssp HHHHHHTTEESCGGGTTCCCBHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCCSTT-CEEE
T ss_pred HHHHHHcCCcCCccccCccchhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCcCCC-ceEE
Confidence 99999999 567889999 689999999999 9999998543 599999999985432 4999
Q ss_pred EEEEEEEecC
Q 041546 227 PWKVRLVIVP 236 (490)
Q Consensus 227 ~~~lkl~p~p 236 (490)
+++|||+|.+
T Consensus 164 ~~~~~L~~~~ 173 (268)
T 2gqt_A 164 RVRLKLKERP 173 (268)
T ss_dssp EEEECCEECC
T ss_pred EEEEEEEeCC
Confidence 9999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.54 E-value=2.2e-14 Score=136.41 Aligned_cols=99 Identities=18% Similarity=0.111 Sum_probs=83.7
Q ss_pred EEEeCCCCEEEEcCCCChHHHHHHHHhhc-----------------cCCcc--ccccccccceeeeEEEccCCceee-cc
Q 041546 144 ISVDAAEQTAWVQAGATLGQLYYRIAEKR-----------------YGAML--RKYGLAADNIVDARLTDANGRLLD-RK 203 (490)
Q Consensus 144 i~vd~~~~~v~v~aG~~~~~l~~~l~~~g-----------------~G~~~--~~~G~~~D~v~~~~vV~~~G~i~~-~~ 203 (490)
|++|+++++|+||||+++.+|++++.++| +.+++ ++||.. |+|++++||++||++++ ..
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG~~yG~~-D~V~~vevV~~dG~i~~~~~ 79 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFAQTFFFP-AEVLGLTFRTPKGRRVRAGG 79 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSSBSSCGG-GGEEEEEEECTTSCEEEEEC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCcccccCCCc-cEEEEEEEEeCCCCEEEECC
Confidence 47899999999999999999999999998 11222 559999 99999999999999986 22
Q ss_pred -----CcchhhhhhhccccCCCceEEEEEEEEEEEecCCeEEEEEEe
Q 041546 204 -----SMGEDLFWAIQGGGIGASFGVIVPWKVRLVIVPSTVTRFRVS 245 (490)
Q Consensus 204 -----~~~~dLf~a~rG~~~~g~fGIIt~~~lkl~p~p~~~~~~~~~ 245 (490)
..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 80 ~~~kn~~gydl~~~~~Gs~--G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 80 VVVKNVQGYDLVRLFVGSF--GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp SSCSSSSCSCHHHHHTTCT--TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred ccccCCCCcchHHHhccCC--CceEEEEEEEEEEEECCcccEEEEEe
Confidence 24589999999998 99999999999999999876555443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.31 E-value=1.2e-06 Score=86.53 Aligned_cols=138 Identities=19% Similarity=0.173 Sum_probs=94.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC--ccccCCCEEEEEcCC---CCcEEEeCCCCEEEEcCCCC
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGL--SYVSHVPFVVIDLLN---LSEISVDAAEQTAWVQAGAT 160 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~--~~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~ 160 (490)
.|.-+++|+|.+|+.++++.. +.+.++.|||||.... .... ..+++||+++ |+.|+.+ ++.+++|||++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~-~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~t 77 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFA-QPEHLIDINRIPELRGIREE--GSTVVIGAMTV 77 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC-CCSEEEECTTCGGGCCEEEE--TTEEEEETTCB
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC-CCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 456789999999999998753 4679999999996542 2111 1389999984 6778765 45799999999
Q ss_pred hHHHHHH-HHhhc----------------------cCCcccccccccccee-------eeEEEccCCceeeccCcchhhh
Q 041546 161 LGQLYYR-IAEKR----------------------YGAMLRKYGLAADNIV-------DARLTDANGRLLDRKSMGEDLF 210 (490)
Q Consensus 161 ~~~l~~~-l~~~g----------------------~G~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~~~~~dLf 210 (490)
+.+|.+. +.+++ .|+.....| ..|.+. .+++.+++| .++... .|+|
T Consensus 78 l~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~-~~D~~~~l~Al~A~v~~~~~~G-~r~i~~--~df~ 153 (287)
T 1ffv_C 78 ENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP-GNDHPALSIAVEAHFVLEGPNG-RRTVPA--DGFF 153 (287)
T ss_dssp HHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT-TCSHHHHHHHTTCEEEEEETTE-EEEEES--TTTE
T ss_pred HHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC-cHHHHHHHHHcCcEEEEEcCCc-eEEEEH--HHHh
Confidence 9999963 33333 111111112 345443 588888988 344333 4899
Q ss_pred hhhccccCCCceEEEEEEEEEEEe
Q 041546 211 WAIQGGGIGASFGVIVPWKVRLVI 234 (490)
Q Consensus 211 ~a~rG~~~~g~fGIIt~~~lkl~p 234 (490)
+++|-..+.. -.|||+++|.+.+
T Consensus 154 ~g~~~t~l~~-~eii~~i~ip~~~ 176 (287)
T 1ffv_C 154 LGTYMTLLEE-NEVMVEIRVPAFA 176 (287)
T ss_dssp EETTEESCCT-TCEEEEEEEECCC
T ss_pred cCcccccCCC-CCEEEEEEecCCC
Confidence 9998655333 4699999998765
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.46 E-value=0.00022 Score=70.22 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=89.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-ccccCCCEEEEEcCC---CCcEEEeCCCCEEEEcCCCCh
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGL-SYVSHVPFVVIDLLN---LSEISVDAAEQTAWVQAGATL 161 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~-~~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~ 161 (490)
.|.-+++|+|.+|+.++++.. +-+.++.+|||+.... -.......++||+++ |+.|+.+ ++.+++||++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 456789999999999988633 4568999999995332 111112379999976 5667764 557999999999
Q ss_pred HHHHH--HHHhhc---------------------cCCcccccccccccee-------eeEEEccCCceeeccCcchhhhh
Q 041546 162 GQLYY--RIAEKR---------------------YGAMLRKYGLAADNIV-------DARLTDANGRLLDRKSMGEDLFW 211 (490)
Q Consensus 162 ~~l~~--~l~~~g---------------------~G~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~~~~~dLf~ 211 (490)
.+|.+ .+.++- .|+.... ....|.+. .+++..++|+ ++..- .|+|.
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a-~p~sD~~~~L~Al~A~v~l~~~~G~-r~v~~--~df~~ 154 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANG-DPGNDMPALMQCLGAAYELTGPEGA-RIVAA--RDYYQ 154 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSC-CTTCSHHHHHHHHTCEEEEEETTEE-EEEEH--HHHEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccC-CCchHHHHHHHHhCcEEEEEeCCcc-EEEEH--HHHhc
Confidence 99984 333321 2222211 12455543 5667777874 33222 48888
Q ss_pred hhccccCCCceEEEEEEEEEEEe
Q 041546 212 AIQGGGIGASFGVIVPWKVRLVI 234 (490)
Q Consensus 212 a~rG~~~~g~fGIIt~~~lkl~p 234 (490)
+++-..+ ..-.|||++.|...+
T Consensus 155 g~~~t~l-~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 155 GAYFTAI-EPGELLTAIRIPVPP 176 (288)
T ss_dssp ETTEESC-CTTCEEEEEEEECCC
T ss_pred CcccccC-CCCCEEEEEEeCCCC
Confidence 7764331 233699999887654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.17 E-value=0.00059 Score=71.45 Aligned_cols=135 Identities=14% Similarity=0.066 Sum_probs=89.7
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC--ccccCCCEEEEEcCC---CCcEEEeCCCCEEEEcCCCChHH
Q 041546 89 VIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGL--SYVSHVPFVVIDLLN---LSEISVDAAEQTAWVQAGATLGQ 163 (490)
Q Consensus 89 ~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~--~~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~~~ 163 (490)
.+++|+|.+|+.++++.. -+.++.+||++.... .... ..+++||+++ |+.|+.+ ++.+++|||+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~----~~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH----PEATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC----TTCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC----CCCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 468999999999988753 257899999997543 1111 2378999987 6778775 45699999999999
Q ss_pred HHHHHHhhc---------------------cCCcc--cccccccccee----eeEEEccCCceeeccCcchhhhhhhccc
Q 041546 164 LYYRIAEKR---------------------YGAML--RKYGLAADNIV----DARLTDANGRLLDRKSMGEDLFWAIQGG 216 (490)
Q Consensus 164 l~~~l~~~g---------------------~G~~~--~~~G~~~D~v~----~~~vV~~~G~i~~~~~~~~dLf~a~rG~ 216 (490)
|.+.+.++= .|+.. ...|.....++ .+++..++|+ ++... .|+|.++|-.
T Consensus 252 l~~~l~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF~~g~~~t 328 (462)
T 2w3s_A 252 LRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQER-RRMPL--EDFFLEYRKQ 328 (462)
T ss_dssp HHHHHTTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGGEEETTEE
T ss_pred HHHHHHHHhHHHHHHHHHhCChhheeeEEcccccccCCCcchHHHHHHHcCCEEEEEeCCce-EEEEH--HHhhcccccc
Confidence 998743221 11111 11233344455 7778888883 33222 4899888754
Q ss_pred cCCCceEEEEEEEEEEEe
Q 041546 217 GIGASFGVIVPWKVRLVI 234 (490)
Q Consensus 217 ~~~g~fGIIt~~~lkl~p 234 (490)
.+ ..-.||+++.|...+
T Consensus 329 ~L-~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 329 DR-RPGEFVESVTLPKSA 345 (462)
T ss_dssp SC-CTTCEEEEEEEESCC
T ss_pred cC-CCCcEEEEEEEecCC
Confidence 42 223699999987644
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.17 E-value=0.0054 Score=60.19 Aligned_cols=137 Identities=18% Similarity=0.116 Sum_probs=83.7
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCc-cccCCCEEEEEcCC---CCcEEEeCCCCEEEEcCCCC
Q 041546 85 PKPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLS-YVSHVPFVVIDLLN---LSEISVDAAEQTAWVQAGAT 160 (490)
Q Consensus 85 ~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~-~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~ 160 (490)
+.|.-+++|+|.+|+.++++. +-..++.+|||+....- ........+||+++ |+.|+.+ ++.+++||+++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQS--AGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEE--TTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEc--CCEEEEcCCCc
Confidence 355678999999999998863 33478899999953211 01112368999987 5567664 56799999999
Q ss_pred hHHHHH--HHHhhc---------------------cCCcccccccccccee-------eeEEEccCCceeeccCcchhhh
Q 041546 161 LGQLYY--RIAEKR---------------------YGAMLRKYGLAADNIV-------DARLTDANGRLLDRKSMGEDLF 210 (490)
Q Consensus 161 ~~~l~~--~l~~~g---------------------~G~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~~~~~dLf 210 (490)
+.+|.+ .+.++- .|+..... ...|.+. .+++..++|+ ++..- .|+|
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~-p~sD~~~~L~Al~A~v~l~~~~g~-R~vp~--~dF~ 152 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD-AGAEMPFLMATLGATMYIASSAGV-RSVSA--TDFM 152 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC-TTCHHHHHHHHTTCEEEEEETTEE-EEEEH--HHHE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC-CcHHHHHHHHHcCcEEEEEcCCce-EEEEH--HHHh
Confidence 999986 333221 12221111 1245443 6667777774 22222 3777
Q ss_pred hhhccccCCCceEEEEEEEEEE
Q 041546 211 WAIQGGGIGASFGVIVPWKVRL 232 (490)
Q Consensus 211 ~a~rG~~~~g~fGIIt~~~lkl 232 (490)
.+++-..+ ..-.|||++.|..
T Consensus 153 ~g~~~t~L-~~~Eil~~I~iP~ 173 (288)
T 1t3q_C 153 KGHYFTDL-EAGEVLVRVEIPI 173 (288)
T ss_dssp EETTEESC-CTTCEEEEEEEEC
T ss_pred cCcccccC-CCCCEEEEEEecC
Confidence 66653221 2236899888764
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.09 E-value=0.01 Score=58.67 Aligned_cols=78 Identities=9% Similarity=0.018 Sum_probs=56.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCcc-ccCCCEEEEEcCC---CCcEEEeCCCCEEEEcCCCCh
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSY-VSHVPFVVIDLLN---LSEISVDAAEQTAWVQAGATL 161 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~-~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~ 161 (490)
.+..+++|+|.+|+.++++. +. ..++.+||++....-. .......+||+++ |+.|+.+ ++.+++||++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEEC--CCeEEEccCCcH
Confidence 45678999999999987753 22 3688999999643210 1112368999986 4556654 567999999999
Q ss_pred HHHHHHHH
Q 041546 162 GQLYYRIA 169 (490)
Q Consensus 162 ~~l~~~l~ 169 (490)
.++.+.+.
T Consensus 83 ~~l~~~~~ 90 (305)
T 3nvz_B 83 SSVEKTLL 90 (305)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.46 E-value=0.079 Score=51.97 Aligned_cols=76 Identities=24% Similarity=0.227 Sum_probs=53.8
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCC-cEEEEcCCCCCCCC-ccccCCCEEEEEcCCC---CcEEEeCCCCEEEEcCCCC
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGL-QIRVRSGGHDFEGL-SYVSHVPFVVIDLLNL---SEISVDAAEQTAWVQAGAT 160 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~-~v~v~ggGh~~~g~-~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~ 160 (490)
+|.-+++|+|.+|+.++++ +++- ..++.+||++.... -.+...+..+||++++ +.|+.+ ++.+++||+++
T Consensus 2 ~~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt 76 (296)
T 3hrd_C 2 KDFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVE--ENTIHIGALST 76 (296)
T ss_dssp CCCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEC--SSEEEEETTCB
T ss_pred CceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEc--CCeEEEccCCc
Confidence 3556899999999888764 3332 47888999996331 1111124789999875 556654 56899999999
Q ss_pred hHHHHH
Q 041546 161 LGQLYY 166 (490)
Q Consensus 161 ~~~l~~ 166 (490)
+.++.+
T Consensus 77 ~~~l~~ 82 (296)
T 3hrd_C 77 FTQIEN 82 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.36 E-value=0.28 Score=48.63 Aligned_cols=76 Identities=20% Similarity=0.142 Sum_probs=54.3
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-ccccCCCEEEEEcCCC---CcEEEeCCCCEEEEcCCCCh
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGL-SYVSHVPFVVIDLLNL---SEISVDAAEQTAWVQAGATL 161 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~-~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 161 (490)
.|.-+++|+|.+|+.+++. + -.-.+.+||+++... -.....+..+||++++ +.|+.+.+ +.+++||++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD-GSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT-SCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC-CeEEEccCCcH
Confidence 4556899999999998876 2 247889999996321 1111123789999865 66776433 36999999999
Q ss_pred HHHHHH
Q 041546 162 GQLYYR 167 (490)
Q Consensus 162 ~~l~~~ 167 (490)
.+|.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998763
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=80.29 E-value=2.1 Score=45.09 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=22.8
Q ss_pred hhhhhhcccH-HHHHHhHhccCCCCCCcCCC
Q 041546 447 WGSKYFKNNF-KRLVHVKTMVDPYDFFKNEQ 476 (490)
Q Consensus 447 ~g~~yfg~n~-~RL~~vK~kyDP~n~F~~~q 476 (490)
|...+||++. +=+++||+.+||+|+|+-.-
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 4467777665 45599999999999997543
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=74.67 E-value=2.5 Score=49.70 Aligned_cols=78 Identities=8% Similarity=0.040 Sum_probs=54.7
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCc-cccCCCEEEEEcCCC---CcEEEeCCCCEEEEcCCCCh
Q 041546 86 KPQVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLS-YVSHVPFVVIDLLNL---SEISVDAAEQTAWVQAGATL 161 (490)
Q Consensus 86 ~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~-~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 161 (490)
.+.-+++|.|.+|+.++++. + -.-++.+||++....- ........+||++++ +.|+.+ ++.+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 44568999999999887653 2 2357889999853211 111123678999874 556654 567999999999
Q ss_pred HHHHHHHH
Q 041546 162 GQLYYRIA 169 (490)
Q Consensus 162 ~~l~~~l~ 169 (490)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 38
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=72.42 E-value=6.7 Score=42.52 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=23.4
Q ss_pred hhhhhhhc-ccHHHHHHhHhccCCCCCCcC
Q 041546 446 IWGSKYFK-NNFKRLVHVKTMVDPYDFFKN 474 (490)
Q Consensus 446 ~~g~~yfg-~n~~RL~~vK~kyDP~n~F~~ 474 (490)
.|-..+|+ ..++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 45556665 479999999999999999963
No 39
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=49.84 E-value=6.9 Score=41.58 Aligned_cols=23 Identities=22% Similarity=0.299 Sum_probs=21.2
Q ss_pred ccHHHHHHhHhccCCCCCCcCCC
Q 041546 454 NNFKRLVHVKTMVDPYDFFKNEQ 476 (490)
Q Consensus 454 ~n~~RL~~vK~kyDP~n~F~~~q 476 (490)
.++++.+++++++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 79999999999999999998753
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=47.29 E-value=9.6 Score=40.59 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=23.6
Q ss_pred cccHHHHHHhHhccCCCCCCcCCCCCCC-ccccc
Q 041546 453 KNNFKRLVHVKTMVDPYDFFKNEQSIPP-LTSWR 485 (490)
Q Consensus 453 g~n~~RL~~vK~kyDP~n~F~~~qsI~p-~~~~~ 485 (490)
++..+ |++||+.+||.|+|+-.--+.| ...|.
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~~~ 568 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSKRKNWQ 568 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSCC-
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCcccccc
Confidence 34444 9999999999999977666655 55664
No 41
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=43.47 E-value=27 Score=41.12 Aligned_cols=77 Identities=13% Similarity=0.053 Sum_probs=48.2
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCC--CccccCCCEEEEEcCCCCcE-EEeCCCCEEEEcCCCChHHHH
Q 041546 89 VIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEG--LSYVSHVPFVVIDLLNLSEI-SVDAAEQTAWVQAGATLGQLY 165 (490)
Q Consensus 89 ~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g--~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~ 165 (490)
..+.|.|.+|+.++..-- -+. ++..|++.... ..... .-.++|++.+.... .+..++..+++||++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~~--p~a--~lvaGnT~~gl~~~~~~~-~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKH--PSA--PLVIGNTYLGLHMKFTDV-SYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHHC--TTS--CBCSSCTTHHHHHC--CC-CCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHHC--CCC--eEEEecccceeeEeecCC-CCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 478999999998875421 122 35567766311 11111 12588988764432 233446679999999999998
Q ss_pred HHHHh
Q 041546 166 YRIAE 170 (490)
Q Consensus 166 ~~l~~ 170 (490)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 42
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=38.53 E-value=11 Score=39.69 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=21.3
Q ss_pred cccHHHHHHhHhccCCCCCCcCC
Q 041546 453 KNNFKRLVHVKTMVDPYDFFKNE 475 (490)
Q Consensus 453 g~n~~RL~~vK~kyDP~n~F~~~ 475 (490)
|+|++.-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999874
No 43
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=34.71 E-value=51 Score=35.02 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=18.4
Q ss_pred hhhhc-ccHHHHHHhHhccCCCCCCcC
Q 041546 449 SKYFK-NNFKRLVHVKTMVDPYDFFKN 474 (490)
Q Consensus 449 ~~yfg-~n~~RL~~vK~kyDP~n~F~~ 474 (490)
...++ ..++=+++||+.+||.|+|+-
T Consensus 554 ~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 554 TRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -----CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 33444 468889999999999999963
No 44
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=33.78 E-value=16 Score=37.89 Aligned_cols=28 Identities=11% Similarity=0.143 Sum_probs=23.2
Q ss_pred hhhhhhhc-ccHHHHHHhHhccCCCCCCc
Q 041546 446 IWGSKYFK-NNFKRLVHVKTMVDPYDFFK 473 (490)
Q Consensus 446 ~~g~~yfg-~n~~RL~~vK~kyDP~n~F~ 473 (490)
.|-...++ ..++-+++||+.+||+|+++
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 45556666 47999999999999999996
No 45
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=30.02 E-value=85 Score=25.94 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=32.4
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGHD 121 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh~ 121 (490)
...|..|++..+++++.++.+.|++.|+|. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 457899999999999999999999999987 45566663
No 46
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=29.70 E-value=88 Score=25.74 Aligned_cols=41 Identities=12% Similarity=0.306 Sum_probs=34.0
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 041546 78 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGH 120 (490)
Q Consensus 78 r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh 120 (490)
+|.. ...|..|+.+.+++++.++.+.|++.|+|. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4643 458899999999999999999999999996 5666665
No 47
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=29.11 E-value=63 Score=26.90 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=32.3
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 041546 85 PKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGHD 121 (490)
Q Consensus 85 ~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh~ 121 (490)
..+..++.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 47889999999999999999999999996 56667765
No 48
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=27.85 E-value=87 Score=25.66 Aligned_cols=38 Identities=11% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGHD 121 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh~ 121 (490)
...|..|+...+++++..+.+-|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 468899999999999999999999999987 55556654
No 49
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=27.44 E-value=84 Score=25.67 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=30.4
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGH 120 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh 120 (490)
...|..|+...+++++.++.+.|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 468899999999999999999999999986 4445554
No 50
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=24.71 E-value=1.1e+02 Score=23.99 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=42.6
Q ss_pred EEEEcCCCChHHHHHHHHhhccCCccccccccccceeeeEEEccCCceeeccCcchhhhhhhc
Q 041546 152 TAWVQAGATLGQLYYRIAEKRYGAMLRKYGLAADNIVDARLTDANGRLLDRKSMGEDLFWAIQ 214 (490)
Q Consensus 152 ~v~v~aG~~~~~l~~~l~~~g~G~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dLf~a~r 214 (490)
.+.+.+.+++.+|++.+.. .++...+.-..++.+|.+|..++..+ ..||.-|+|
T Consensus 19 ~~~v~~~i~~~~L~~kv~~--------~~~~~~~~~f~lky~DEeGD~itisS-d~EL~eAl~ 72 (89)
T 1vd2_A 19 ITHFEPSISFEGLCNEVRD--------MCSFDNEQLFTMKWIDEEGDPCTVSS-QLELEEAFR 72 (89)
T ss_dssp EEEECTTCCHHHHHHHHHH--------HTTCCSSCCEEEEECCSSSCCEECCS-HHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH--------HhCCCCCCeEEEEEECCCCCcccccC-HHHHHHHHH
Confidence 4667888999999999876 45555677789999999999888433 358888888
No 51
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=23.62 E-value=93 Score=26.66 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=29.9
Q ss_pred EEEcCCCCcEEEeCCCCEEEEcCCCChHHHHHHHHhhccCCccccccccccceeeeEEEccCCceee
Q 041546 135 VIDLLNLSEISVDAAEQTAWVQAGATLGQLYYRIAEKRYGAMLRKYGLAADNIVDARLTDANGRLLD 201 (490)
Q Consensus 135 vIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~G~~~~~~G~~~D~v~~~~vV~~~G~i~~ 201 (490)
-|||++++.|++--. -.+|| .++|++++....||..+.
T Consensus 72 ~IDls~V~sI~vT~G---------------------------~f~~g--g~hilaltF~~~dGS~v~ 109 (152)
T 4gx7_A 72 SVDLSGVKSITATSG---------------------------DFQYG--GQQLVALTFTYQDGRQQT 109 (152)
T ss_dssp EEECTTEEEEEEEEE---------------------------EETTS--SEEEEEEEEEETTSCEEE
T ss_pred EeehhhcEEEEEEee---------------------------eeecc--CceEEEEEEEEcCCcEEE
Confidence 589999888876421 13566 789999999999999887
No 52
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=23.17 E-value=27 Score=36.86 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=23.4
Q ss_pred ccHHHHHHhHhccCCCCCCcCCCCCCCcccccc
Q 041546 454 NNFKRLVHVKTMVDPYDFFKNEQSIPPLTSWRK 486 (490)
Q Consensus 454 ~n~~RL~~vK~kyDP~n~F~~~qsI~p~~~~~~ 486 (490)
..++-+++||+.+||+|+|+-..-++-...+|+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~~~~~~~~ 555 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYSH 555 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGCCCTTSCH
T ss_pred HHHHHHHHHHHHcCccCCCCCCccccCcccccc
Confidence 367888999999999999976544432234443
No 53
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=21.89 E-value=28 Score=27.06 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=13.8
Q ss_pred hh-cccHHHHHHhHhcc
Q 041546 451 YF-KNNFKRLVHVKTMV 466 (490)
Q Consensus 451 yf-g~n~~RL~~vK~ky 466 (490)
+| .+|++||.++|+++
T Consensus 23 ~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 23 FFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GCCHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHh
Confidence 44 68999999999887
No 54
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=21.66 E-value=85 Score=24.44 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=27.7
Q ss_pred cEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEcCCCCc
Q 041546 88 QVIITPLDVSQVQAAIKCSKKHGLQIRVRSGGHDFEGLSYVSHVPFVVIDLLNLSE 143 (490)
Q Consensus 88 ~~vv~P~s~~dV~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~gvvIdl~~l~~ 143 (490)
..++.|++-+|.+.+....++.. .|+|+|.+|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 58999999999999999887532 58888887754
No 55
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=21.09 E-value=1.6e+02 Score=24.03 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=30.6
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 041546 84 TPKPQVIITPLDVSQVQAAIKCSKKHGLQI-RVRSGGH 120 (490)
Q Consensus 84 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v-~v~ggGh 120 (490)
...|..+++..+++++..+.+.|.+.|+|. .++=.|+
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 346899999999999999999999999985 4455554
Done!