Your job contains 1 sequence.
>041553
MNWSSRERKRRRMQYTYTAWVPTTYPPLPKIVTVKSKPSSAKTQTPIRYSAHEYINYNDN
ININDDADDGRKFALPYHVKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREI
YNFNRSLQERTVRMDCLLLLDKVEVPEGLDNISTHTVRVSSVVMKKLSGVQSSESIEAIA
LMKIPTSVFSIDVNQKEADCRSWFPSIHRILVLDGIQDPGNLGTLLRTAMAFKWGGVFLL
PGCCDPFSEKALRASRGACFQLPIVSGSWYHLEVLKDEFQMKLLAGHAGGNEEPRQVLQL
SQELADSFAGVPLCL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041553
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121075 - symbol:AT4G38020 species:3702 "Arabi... 816 2.5e-81 1
UNIPROTKB|Q3ABT2 - symbol:CHY_1573 "RNA methyltransferase... 162 2.7e-15 2
TIGR_CMR|CHY_1573 - symbol:CHY_1573 "RNA methyltransferas... 162 2.7e-15 2
TIGR_CMR|BA_4805 - symbol:BA_4805 "RNA methyltransferase,... 160 1.1e-12 2
UNIPROTKB|E2QXE5 - symbol:RNMTL1 "Uncharacterized protein... 155 1.6e-08 1
UNIPROTKB|F1NG21 - symbol:RNMTL1 "Uncharacterized protein... 147 2.3e-08 2
UNIPROTKB|F1RHK0 - symbol:RNMTL1 "Uncharacterized protein... 147 1.3e-07 1
UNIPROTKB|E1BBM0 - symbol:RNMTL1 "Uncharacterized protein... 145 2.1e-07 1
MGI|MGI:1914640 - symbol:Rnmtl1 "RNA methyltransferase li... 144 2.8e-07 1
UNIPROTKB|Q9HC36 - symbol:RNMTL1 "RNA methyltransferase-l... 141 6.2e-07 1
ZFIN|ZDB-GENE-030131-158 - symbol:rnmtl1b "RNA methyltran... 138 1.5e-06 1
FB|FBgn0036889 - symbol:CG14100 species:7227 "Drosophila ... 133 4.8e-06 1
ZFIN|ZDB-GENE-050417-184 - symbol:rnmtl1a "RNA methyltran... 128 2.0e-05 1
>TAIR|locus:2121075 [details] [associations]
symbol:AT4G38020 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0006396 "RNA
processing" evidence=IEA;ISS] [GO:0008173 "RNA methyltransferase
activity" evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001537 Pfam:PF00588 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003723 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 eggNOG:COG0566 HSSP:P39290 UniGene:At.31211
EMBL:BT024884 EMBL:AK117528 IPI:IPI00535166 RefSeq:NP_195515.2
ProteinModelPortal:Q8GYL4 STRING:Q8GYL4 PaxDb:Q8GYL4 PRIDE:Q8GYL4
EnsemblPlants:AT4G38020.1 GeneID:829958 KEGG:ath:AT4G38020
TAIR:At4g38020 HOGENOM:HOG000218799 InParanoid:Q8GYL4 KO:K03437
OMA:VYIPEGK PhylomeDB:Q8GYL4 ProtClustDB:CLSN2680315
Genevestigator:Q8GYL4 Uniprot:Q8GYL4
Length = 352
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 157/246 (63%), Positives = 195/246 (79%)
Query: 72 KFALPYHVKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNFNRSLQERT 131
+ +LP HV +ITST+NPFVKHCLKLRQSSSYRH+HGS LVVGT PIRE+ F + Q T
Sbjct: 59 RVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQGMT 118
Query: 132 VRMDCLLLLDKVEVPEGLDNISTHTVRVSSVVMKKLSGVQSSESIEAIALMKIPTSVFSI 191
++CLLL ++ ++P+GL+++S VRVSS+VMKKLSGVQS+ES+EAIALM+IP+S +
Sbjct: 119 TEIECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFTDL 178
Query: 192 -DVNQKEADCRSWFPSIHRILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEK 250
D DC WFPS HR+LVLD IQDPGNLGTL+R+AMAF W G FLLPGCCDP+++K
Sbjct: 179 KDDKDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYNDK 238
Query: 251 ALRASRGACFQLPIVSGSWYHLEVLKDEFQMKLLAGH-AGGNEEPRQVLQLSQELADSFA 309
ALRASRGA FQLPIVSG+W HL++L++EFQMKLLAGH A ++ + V +LS E A S A
Sbjct: 239 ALRASRGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLSVEFAQSLA 298
Query: 310 GVPLCL 315
PLCL
Sbjct: 299 EKPLCL 304
>UNIPROTKB|Q3ABT2 [details] [associations]
symbol:CHY_1573 "RNA methyltransferase, TrmH family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 eggNOG:COG0566 HOGENOM:HOG000218799
KO:K03437 RefSeq:YP_360402.1 ProteinModelPortal:Q3ABT2
STRING:Q3ABT2 GeneID:3726319 KEGG:chy:CHY_1573 PATRIC:21276271
OMA:SSHARHA BioCyc:CHYD246194:GJCN-1572-MONOMER Uniprot:Q3ABT2
Length = 258
Score = 162 (62.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 211 LVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSGSWY 270
LVLDG+QDPGN+GTLLR A F GV LLP D ++ K +RAS G F+ P++
Sbjct: 112 LVLDGLQDPGNVGTLLRAAFGFGVSGVILLPPAVDIYNPKVIRASAGTAFKFPVLRMEAD 171
Query: 271 HLE--VLKDEFQMKLLAGHAGG 290
L+ +LK+ + LA GG
Sbjct: 172 ELKDIILKNNIPL-FLAESEGG 192
Score = 81 (33.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 79 VKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNFNRSLQERTVRMDCLL 138
+K I+S N F K KL Q S++R +G +V G + E+ N L+ L+
Sbjct: 2 IKKISSPENSFYKELKKLYQDSAFRRKNGMFIVEGEKLVFELITDNWPLKY-------LV 54
Query: 139 LLDKVEVPEGLDNISTHTVRVSSVVMKKLSGVQSSESIEAIALMK 183
+ + + +D+ V ++ + K+S + + I A+A MK
Sbjct: 55 VSESYWQAKKIDDDGVKIVVLTDQLFNKISELVTPPGILAVACMK 99
>TIGR_CMR|CHY_1573 [details] [associations]
symbol:CHY_1573 "RNA methyltransferase, TrmH family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] [GO:0008173 "RNA
methyltransferase activity" evidence=ISS] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 eggNOG:COG0566 HOGENOM:HOG000218799
KO:K03437 RefSeq:YP_360402.1 ProteinModelPortal:Q3ABT2
STRING:Q3ABT2 GeneID:3726319 KEGG:chy:CHY_1573 PATRIC:21276271
OMA:SSHARHA BioCyc:CHYD246194:GJCN-1572-MONOMER Uniprot:Q3ABT2
Length = 258
Score = 162 (62.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 211 LVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSGSWY 270
LVLDG+QDPGN+GTLLR A F GV LLP D ++ K +RAS G F+ P++
Sbjct: 112 LVLDGLQDPGNVGTLLRAAFGFGVSGVILLPPAVDIYNPKVIRASAGTAFKFPVLRMEAD 171
Query: 271 HLE--VLKDEFQMKLLAGHAGG 290
L+ +LK+ + LA GG
Sbjct: 172 ELKDIILKNNIPL-FLAESEGG 192
Score = 81 (33.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 79 VKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNFNRSLQERTVRMDCLL 138
+K I+S N F K KL Q S++R +G +V G + E+ N L+ L+
Sbjct: 2 IKKISSPENSFYKELKKLYQDSAFRRKNGMFIVEGEKLVFELITDNWPLKY-------LV 54
Query: 139 LLDKVEVPEGLDNISTHTVRVSSVVMKKLSGVQSSESIEAIALMK 183
+ + + +D+ V ++ + K+S + + I A+A MK
Sbjct: 55 VSESYWQAKKIDDDGVKIVVLTDQLFNKISELVTPPGILAVACMK 99
>TIGR_CMR|BA_4805 [details] [associations]
symbol:BA_4805 "RNA methyltransferase, TrmH family"
species:198094 "Bacillus anthracis str. Ames" [GO:0008173 "RNA
methyltransferase activity" evidence=ISS] [GO:0009451 "RNA
modification" evidence=ISS] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 HSSP:P39290 HOGENOM:HOG000218799 KO:K03437
OMA:AQGSHFH RefSeq:NP_847008.1 RefSeq:YP_021450.1
RefSeq:YP_030704.1 ProteinModelPortal:Q81L29 DNASU:1083938
EnsemblBacteria:EBBACT00000012902 EnsemblBacteria:EBBACT00000014455
EnsemblBacteria:EBBACT00000024420 GeneID:1083938 GeneID:2815769
GeneID:2851594 KEGG:ban:BA_4805 KEGG:bar:GBAA_4805 KEGG:bat:BAS4457
ProtClustDB:CLSK873510 BioCyc:BANT260799:GJAJ-4514-MONOMER
BioCyc:BANT261594:GJ7F-4667-MONOMER Uniprot:Q81L29
Length = 254
Score = 160 (61.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 209 RILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSGS 268
+ L+LDG+QDPGNLGT++RTA A V L GC D ++ K LR+++G+ F LPIV G+
Sbjct: 106 KFLLLDGLQDPGNLGTIIRTADAAGIHAVVLGEGCVDAYNSKVLRSTQGSIFHLPIVKGN 165
Score = 58 (25.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 25/101 (24%), Positives = 44/101 (43%)
Query: 79 VKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNFNRSLQERTVRMDCLL 138
+KNI S NP VK KL Q+ R G V G + E +L+ V L+
Sbjct: 1 MKNIDSVQNPRVKQWKKL-QTKKERDKKGLFFVEGFHLVEE------ALKAGVVTE--LI 51
Query: 139 LLDKVEVPEGLDNISTHTVRVSSVVMKKLSGVQSSESIEAI 179
+ D+ ++P+ V ++K L ++++ + A+
Sbjct: 52 VSDQTDLPKDWTVNDVEMYIVPEAIVKVLRETETTQGVFAV 92
>UNIPROTKB|E2QXE5 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008173 "RNA methyltransferase activity" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 GO:GO:0005739 GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
GeneTree:ENSGT00390000017317 CTD:55178 OMA:RYDKAFP
EMBL:AAEX03006687 RefSeq:XP_853914.1 Ensembl:ENSCAFT00000030363
GeneID:611179 KEGG:cfa:611179 Uniprot:E2QXE5
Length = 423
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 161 SVVMKKLSGVQS-SESIEAIALMKIPTSVFSIDVNQKEADCRSWFPSIHRILVLDGIQDP 219
S++ K ++ S+ + +M I + + E R P + L+ D ++DP
Sbjct: 164 SLIKVKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPETQLRHLLPLL---LICDNLRDP 220
Query: 220 GNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSG-SW 269
GNLGT+LR+A V L GC DP+ K LRA+ GA FQ+PI++ W
Sbjct: 221 GNLGTILRSAAGAGCSKVLLTKGCVDPWEPKVLRAAMGAHFQVPIINNLDW 271
>UNIPROTKB|F1NG21 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0008173 "RNA methyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:AADN02025802 IPI:IPI00595089
Ensembl:ENSGALT00000007658 Uniprot:F1NG21
Length = 387
Score = 147 (56.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 210 ILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSG-S 268
+L+ D I+DPGNLGT+LR+A V L GC DP+ K LRA GA F++PIV+
Sbjct: 166 VLICDNIRDPGNLGTILRSAAGAGCEKVLLTKGCVDPWEPKVLRAGMGAHFRVPIVADLD 225
Query: 269 W 269
W
Sbjct: 226 W 226
Score = 44 (20.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 96 LRQSSSYRHSHGSALVVGTTPIRE 119
+ +S S+R HG L+ G IR+
Sbjct: 69 IAKSRSFRDRHGKVLLEGLRLIRD 92
>UNIPROTKB|F1RHK0 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:CU928997 Ensembl:ENSSSCT00000019379 Uniprot:F1RHK0
Length = 424
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 51/175 (29%), Positives = 79/175 (45%)
Query: 103 RHSHGSAL-VVGTTPIREIYNFNRSLQERTVRMDCLLL--LDKVEVPEGLDNIST---HT 156
R SH S + +V + P RE L+ R + D L + K+ L+ I
Sbjct: 103 RLSHSSVMTIVKSRPFREKQG-KILLEGRRLIADALKAGAVPKIFFFSRLEYIKELPIEK 161
Query: 157 VRVSSVVMKKLSGVQS-SESIEAIALMKIPTSVFSIDVNQKEADCRSWFPSIHRILVLDG 215
++ S++ K ++ S+ + +M I + E R P + L+ D
Sbjct: 162 LKGVSLIKVKFEDIKDWSDLVTPQGIMGIFAKPDHAKMTYPETQLRHTLPLL---LICDN 218
Query: 216 IQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSG-SW 269
++DPGNLGT+LR+A V L GC D + K LRA GA FQ+PI++ W
Sbjct: 219 LRDPGNLGTILRSAAGAGCSRVLLTKGCVDAWEPKVLRAGMGAHFQVPIINNLDW 273
>UNIPROTKB|E1BBM0 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:DAAA02048649 IPI:IPI01000980
Ensembl:ENSBTAT00000025502 Uniprot:E1BBM0
Length = 417
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/174 (27%), Positives = 77/174 (44%)
Query: 103 RHSHGSAL-VVGTTPIRE----IYNFNRSLQERTVRMDCLLLLDKVEVPEGLDNISTHTV 157
R SH S + +V + P RE I R L ++ + + E + + +
Sbjct: 103 RLSHSSVMTIVKSRPFREKQGKILLEGRRLIADALKAGAVPQIFFFSRLEYIKELPIEKL 162
Query: 158 RVSSVVMKKLSGVQS-SESIEAIALMKIPTSVFSIDVNQKEADCRSWFPSIHRILVLDGI 216
+ S++ K ++ S+ + +M I + + E R P L+ D +
Sbjct: 163 KGVSLIKVKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPETQLRHTLPIS---LICDNL 219
Query: 217 QDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSG-SW 269
+DPGNLGT+LR+A V L GC D + K LRA GA FQ+PI++ W
Sbjct: 220 RDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIINNLDW 273
>MGI|MGI:1914640 [details] [associations]
symbol:Rnmtl1 "RNA methyltransferase like 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 MGI:MGI:1914640 GO:GO:0005739 GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510 EMBL:AL591129
eggNOG:COG0566 GeneTree:ENSGT00390000017317 CTD:55178
HOGENOM:HOG000154151 HOVERGEN:HBG108411 OMA:RYDKAFP
OrthoDB:EOG4PG619 EMBL:AK014739 EMBL:AK147805 EMBL:BC038288
EMBL:BC090975 EMBL:BC115622 EMBL:BC115623 IPI:IPI00344090
RefSeq:NP_899086.2 UniGene:Mm.24886 ProteinModelPortal:Q5ND52
SMR:Q5ND52 STRING:Q5ND52 PhosphoSite:Q5ND52 PRIDE:Q5ND52
Ensembl:ENSMUST00000040577 GeneID:67390 KEGG:mmu:67390
UCSC:uc007kfn.2 InParanoid:Q5ND52 NextBio:324432 Bgee:Q5ND52
CleanEx:MM_RNMTL1 Genevestigator:Q5ND52 Uniprot:Q5ND52
Length = 418
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 210 ILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIVSG-S 268
+L+ D ++DPGNLGT+LR+A V L GC D + K LRA GA FQ+PIV+
Sbjct: 211 VLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVE 270
Query: 269 W 269
W
Sbjct: 271 W 271
>UNIPROTKB|Q9HC36 [details] [associations]
symbol:RNMTL1 "RNA methyltransferase-like protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 GO:GO:0005739 EMBL:CH471108
GO:GO:0003723 GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
eggNOG:COG0566 EMBL:AK001443 EMBL:AK222900 EMBL:AF177344
EMBL:BC011550 EMBL:BC050614 IPI:IPI00335589 RefSeq:NP_060616.1
UniGene:Hs.182729 ProteinModelPortal:Q9HC36 SMR:Q9HC36
IntAct:Q9HC36 STRING:Q9HC36 PhosphoSite:Q9HC36 DMDM:74734265
PaxDb:Q9HC36 PRIDE:Q9HC36 DNASU:55178 Ensembl:ENST00000304478
GeneID:55178 KEGG:hsa:55178 UCSC:uc002frw.3 CTD:55178
GeneCards:GC17P000685 HGNC:HGNC:18485 HPA:HPA022534 HPA:HPA023031
HPA:HPA023292 MIM:612600 neXtProt:NX_Q9HC36 PharmGKB:PA38341
HOGENOM:HOG000154151 HOVERGEN:HBG108411 InParanoid:Q9HC36
OMA:RYDKAFP OrthoDB:EOG4PG619 PhylomeDB:Q9HC36 ChiTaRS:RNMTL1
GenomeRNAi:55178 NextBio:58983 Bgee:Q9HC36 CleanEx:HS_RNMTL1
Genevestigator:Q9HC36 Uniprot:Q9HC36
Length = 420
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 206 SIHRILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPIV 265
S+ +L+ D ++DPGNLGT+LR+A V L GC D + K LRA GA F++PI+
Sbjct: 207 SLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFRMPII 266
Query: 266 SG-SW 269
+ W
Sbjct: 267 NNLEW 271
>ZFIN|ZDB-GENE-030131-158 [details] [associations]
symbol:rnmtl1b "RNA methyltransferase like 1b"
species:7955 "Danio rerio" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008173
"RNA methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
ZFIN:ZDB-GENE-030131-158 GO:GO:0003723 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 GeneTree:ENSGT00390000017317 EMBL:CU928208
EMBL:FP003594 IPI:IPI00944363 RefSeq:NP_001157404.1
UniGene:Dr.78212 Ensembl:ENSDART00000100240 GeneID:792923
KEGG:dre:792923 CTD:792923 NextBio:20931242 Bgee:F1QYC8
Uniprot:F1QYC8
Length = 449
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 147 EGLDNISTHTVRVSSVVMKKLSGVQS-SE---SIEAIALMKIPTSVFSIDVNQKEADCRS 202
+ L + +R ++VV K+ Q SE S E IA+ K P + + ++++
Sbjct: 171 DALRELPLDKLRQTNVVKVKMEDAQVWSELDTSQEIIAIFKRPEAS-RLTFSEEK----- 224
Query: 203 WFPSIHRILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQL 262
+ ++ L+ D ++DPGNLG++LR+A A V L GC D + K LRA+ GA F+L
Sbjct: 225 YGRAVPLTLICDTVRDPGNLGSVLRSAAAAGCHSVLLTKGCVDIWELKVLRAAMGAHFRL 284
Query: 263 PIVSG-SW 269
PI+ +W
Sbjct: 285 PIIPNLTW 292
>FB|FBgn0036889 [details] [associations]
symbol:CG14100 species:7227 "Drosophila melanogaster"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008173 "RNA methyltransferase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588
Pfam:PF08032 SMART:SM00967 GO:GO:0005875 EMBL:AE014296
GO:GO:0003723 GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
eggNOG:COG0566 EMBL:AY071079 RefSeq:NP_649130.2 UniGene:Dm.6131
ProteinModelPortal:Q9VW14 SMR:Q9VW14 STRING:Q9VW14 PaxDb:Q9VW14
PRIDE:Q9VW14 EnsemblMetazoa:FBtr0074971 GeneID:40132
KEGG:dme:Dmel_CG14100 UCSC:CG14100-RA FlyBase:FBgn0036889
GeneTree:ENSGT00390000017317 InParanoid:Q9VW14 OMA:AVEHGWQ
OrthoDB:EOG4PNVZR PhylomeDB:Q9VW14 GenomeRNAi:40132 NextBio:817156
Bgee:Q9VW14 Uniprot:Q9VW14
Length = 407
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 87 NPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNFNRSLQERTVRMDCLLLLDKVEVP 146
+P L +S R + +V G I+E ++ L L K EV
Sbjct: 118 DPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQKDQLALVKEEV- 176
Query: 147 EGLDNISTHT--VRVSSVVMKKLSGVQSSESIEAIALMKIPTSVFSIDVNQKEADCRSWF 204
G+ + T T +V +K S + + + +A+ P+ ++ N E R
Sbjct: 177 -GVAQVETGTKIYKVPQHDLKTWSSLVTPPGL--MAIFDRPSDK-GLEKNLAEQQ-RLGS 231
Query: 205 PSIHRILVLDGIQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPI 264
+V D I++P NLG+++RT A V + GCCDP+ KALR G F++PI
Sbjct: 232 QPFPITVVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVPI 291
>ZFIN|ZDB-GENE-050417-184 [details] [associations]
symbol:rnmtl1a "RNA methyltransferase like 1a"
species:7955 "Danio rerio" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008173
"RNA methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 ZFIN:ZDB-GENE-050417-184 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
EMBL:AL954372 IPI:IPI00500332 Ensembl:ENSDART00000147900
Uniprot:F1R7U4
Length = 443
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 98 QSSSYRHSHGSALVVGTTPIREIYNFNRSLQERTVRMDCLLLLDKV-EVPEGLDNIS-TH 155
+S ++R G L+ G I + + S Q M LL+++ E+P LD +
Sbjct: 140 RSRAFRDKEGKVLLEGRRLICDALSAGASPQ-----MIFFSLLERLQELP--LDKLQQAK 192
Query: 156 TVRVSSVVMKKLSGVQSSESIEAIALMKIPTSVFSIDVNQKEADCRSWFPSIHRILVLDG 215
++V +K S + + + + IA+ P + S K+A +S + L+ D
Sbjct: 193 LIKVKYEDIKMWSDLVTPQGL--IAIFSKPDA--SRLTFPKDARLQS----VPLFLICDN 244
Query: 216 IQDPGNLGTLLRTAMAFKWGGVFLLPGCCDPFSEKALRASRGACFQLPI 264
++D GNLGT LR A A V L GC D + K LR++ GA F+LP+
Sbjct: 245 VRDAGNLGTTLRCAAAAGCDRVLLSKGCVDAWEPKVLRSAMGAHFRLPV 293
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 299 0.00095 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 618 (66 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.13u 0.09s 22.22t Elapsed: 00:00:01
Total cpu time: 22.13u 0.09s 22.22t Elapsed: 00:00:01
Start: Mon May 20 15:44:41 2013 End: Mon May 20 15:44:42 2013