Query 041556
Match_columns 143
No_of_seqs 119 out of 1068
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 08:21:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041556.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041556hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01251 PH_centaurin_alpha Cen 99.9 8.3E-24 1.8E-28 132.0 12.4 95 29-127 1-102 (103)
2 cd01233 Unc104 Unc-104 pleckst 99.9 1.2E-23 2.6E-28 130.7 12.4 94 27-125 2-98 (100)
3 cd01264 PH_melted Melted pleck 99.9 9E-24 2E-28 130.1 11.2 92 29-124 2-100 (101)
4 cd01260 PH_CNK Connector enhan 99.9 2.2E-23 4.8E-28 128.7 12.0 91 28-124 1-96 (96)
5 cd01238 PH_Tec Tec pleckstrin 99.9 3.5E-23 7.5E-28 129.8 11.5 94 28-123 1-105 (106)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 7.6E-23 1.6E-27 125.9 11.8 89 29-124 1-93 (95)
7 cd01247 PH_GPBP Goodpasture an 99.9 3E-22 6.4E-27 122.2 12.5 89 29-123 1-90 (91)
8 cd01235 PH_SETbf Set binding f 99.9 4.1E-22 8.8E-27 124.0 12.6 93 29-125 1-101 (101)
9 cd01252 PH_cytohesin Cytohesin 99.9 9.5E-22 2.1E-26 126.9 13.7 95 28-128 1-116 (125)
10 cd01257 PH_IRS Insulin recepto 99.9 8E-22 1.7E-26 122.0 12.5 92 26-122 1-99 (101)
11 cd01236 PH_outspread Outspread 99.9 8.5E-22 1.8E-26 122.3 11.6 91 29-122 1-101 (104)
12 cd01266 PH_Gab Gab (Grb2-assoc 99.9 2.8E-21 6E-26 121.7 11.5 92 29-124 1-107 (108)
13 cd01246 PH_oxysterol_bp Oxyste 99.9 3.2E-20 6.9E-25 113.1 12.1 88 29-124 1-91 (91)
14 cd01250 PH_centaurin Centaurin 99.8 4.5E-20 9.7E-25 113.1 11.7 92 29-123 1-93 (94)
15 cd01245 PH_RasGAP_CG5898 RAS G 99.8 2.1E-20 4.6E-25 114.7 9.5 89 30-123 2-97 (98)
16 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 1.5E-19 3.2E-24 111.3 11.3 79 41-124 19-98 (98)
17 PF00169 PH: PH domain; Inter 99.8 2.8E-18 6E-23 106.1 14.1 97 28-125 2-103 (104)
18 cd01241 PH_Akt Akt pleckstrin 99.8 1.6E-18 3.4E-23 108.0 11.6 90 27-124 1-101 (102)
19 KOG0930 Guanine nucleotide exc 99.8 1.5E-18 3.2E-23 122.4 11.0 97 24-126 257-376 (395)
20 cd01219 PH_FGD FGD (faciogenit 99.8 4.1E-17 8.9E-22 101.4 12.3 98 27-126 2-100 (101)
21 cd01263 PH_anillin Anillin Ple 99.8 2.1E-17 4.6E-22 105.2 10.4 95 28-123 2-121 (122)
22 cd01230 PH_EFA6 EFA6 Pleckstri 99.7 8E-17 1.7E-21 102.1 12.4 100 29-129 2-115 (117)
23 cd01253 PH_beta_spectrin Beta- 99.7 1.2E-16 2.5E-21 99.9 10.8 94 29-123 1-103 (104)
24 cd01256 PH_dynamin Dynamin ple 99.7 2.3E-16 5E-21 94.8 10.8 96 27-126 1-106 (110)
25 cd01254 PH_PLD Phospholipase D 99.7 1.6E-16 3.5E-21 101.7 10.4 79 42-124 32-121 (121)
26 cd01237 Unc112 Unc-112 pleckst 99.7 5.9E-16 1.3E-20 95.3 10.2 84 39-125 16-103 (106)
27 PF15409 PH_8: Pleckstrin homo 99.7 1.5E-15 3.2E-20 91.2 10.8 85 31-124 1-88 (89)
28 PF15413 PH_11: Pleckstrin hom 99.7 1.5E-15 3.2E-20 96.0 10.5 96 29-124 1-112 (112)
29 cd01220 PH_CDEP Chondrocyte-de 99.7 6.7E-15 1.5E-19 90.9 12.3 96 28-126 3-98 (99)
30 smart00233 PH Pleckstrin homol 99.7 1.2E-14 2.6E-19 88.7 13.5 97 28-125 2-101 (102)
31 PF15410 PH_9: Pleckstrin homo 99.6 1.2E-14 2.6E-19 92.9 12.0 96 29-125 2-118 (119)
32 cd01234 PH_CADPS CADPS (Ca2+-d 99.6 4.6E-15 1E-19 89.9 5.6 103 28-130 3-115 (117)
33 cd00821 PH Pleckstrin homology 99.6 6.8E-14 1.5E-18 84.5 9.8 93 29-123 1-95 (96)
34 cd00900 PH-like Pleckstrin hom 99.5 3E-13 6.5E-18 82.2 11.8 90 30-124 2-99 (99)
35 cd01218 PH_phafin2 Phafin2 Pl 99.4 3.6E-11 7.9E-16 74.7 12.1 98 27-128 4-101 (104)
36 cd01239 PH_PKD Protein kinase 99.3 2E-11 4.4E-16 75.8 9.8 93 28-124 1-117 (117)
37 cd01242 PH_ROK Rok (Rho- assoc 99.3 2.1E-10 4.6E-15 70.8 12.3 96 29-125 2-110 (112)
38 KOG1090 Predicted dual-specifi 99.2 2.9E-12 6.3E-17 103.3 2.5 97 25-125 1632-1731(1732)
39 cd01259 PH_Apbb1ip Apbb1ip (Am 99.2 6.1E-11 1.3E-15 73.4 7.3 97 29-126 2-109 (114)
40 KOG2059 Ras GTPase-activating 99.2 3.1E-11 6.8E-16 94.4 7.1 99 27-130 565-669 (800)
41 cd01243 PH_MRCK MRCK (myotonic 99.2 9.4E-10 2E-14 69.0 12.3 96 28-123 3-117 (122)
42 cd01261 PH_SOS Son of Sevenles 99.2 6.1E-10 1.3E-14 70.0 11.1 100 26-126 3-110 (112)
43 cd01249 PH_oligophrenin Oligop 99.2 6.6E-10 1.4E-14 68.4 10.2 92 29-122 1-102 (104)
44 KOG0690 Serine/threonine prote 99.2 7.9E-11 1.7E-15 86.1 6.4 101 25-128 13-119 (516)
45 PF14593 PH_3: PH domain; PDB: 99.1 1.5E-09 3.3E-14 67.3 10.7 92 25-129 11-103 (104)
46 KOG3640 Actin binding protein 99.1 2.6E-10 5.6E-15 91.7 7.6 107 26-133 989-1114(1116)
47 cd01240 PH_beta-ARK Beta adren 98.9 1.7E-09 3.7E-14 66.4 3.4 97 26-127 2-100 (116)
48 PLN00188 enhanced disease resi 98.8 4.9E-08 1.1E-12 77.6 10.7 101 26-128 3-112 (719)
49 KOG0521 Putative GTPase activa 98.8 5.1E-09 1.1E-13 85.0 3.6 105 25-134 272-377 (785)
50 KOG3751 Growth factor receptor 98.8 3.9E-08 8.5E-13 75.2 7.9 101 25-126 315-425 (622)
51 cd01224 PH_Collybistin Collybi 98.8 6.2E-07 1.3E-11 55.8 11.8 96 28-123 3-105 (109)
52 cd01222 PH_clg Clg (common-sit 98.8 4.9E-07 1.1E-11 55.5 11.3 91 26-126 3-96 (97)
53 KOG4424 Predicted Rho/Rac guan 98.7 3E-08 6.5E-13 76.6 5.4 109 18-128 263-372 (623)
54 cd01258 PH_syntrophin Syntroph 98.7 1.5E-07 3.2E-12 58.6 7.1 93 31-123 3-107 (108)
55 PTZ00267 NIMA-related protein 98.6 3E-07 6.4E-12 71.5 9.8 99 25-125 375-476 (478)
56 cd01262 PH_PDK1 3-Phosphoinosi 98.6 9.1E-07 2E-11 52.9 8.7 86 28-125 2-88 (89)
57 KOG3543 Ca2+-dependent activat 98.6 9.6E-09 2.1E-13 80.4 0.1 111 24-134 461-574 (1218)
58 KOG0932 Guanine nucleotide exc 98.6 3.4E-08 7.4E-13 76.2 2.8 104 25-129 504-621 (774)
59 PLN02866 phospholipase D 98.5 4.5E-06 9.8E-11 69.2 12.6 100 25-128 180-310 (1068)
60 cd01225 PH_Cool_Pix Cool (clon 98.4 1.2E-05 2.7E-10 49.9 10.9 100 23-124 8-108 (111)
61 PF12814 Mcp5_PH: Meiotic cell 98.4 1.8E-05 3.8E-10 50.8 12.1 99 27-125 9-121 (123)
62 KOG3723 PH domain protein Melt 98.4 7.2E-08 1.6E-12 74.7 0.1 126 3-132 712-843 (851)
63 cd01226 PH_exo84 Exocyst compl 98.3 2.5E-05 5.5E-10 48.0 10.3 95 28-125 3-98 (100)
64 KOG1739 Serine/threonine prote 98.3 2E-06 4.3E-11 65.6 5.8 93 28-126 25-117 (611)
65 PTZ00283 serine/threonine prot 98.1 1.3E-05 2.8E-10 62.8 7.8 99 26-126 372-490 (496)
66 cd01223 PH_Vav Vav pleckstrin 98.1 0.0001 2.2E-09 46.5 9.4 102 27-128 4-114 (116)
67 cd01221 PH_ephexin Ephexin Ple 98.1 0.00014 3E-09 46.6 10.1 77 42-121 26-118 (125)
68 KOG0248 Cytoplasmic protein Ma 98.0 3.1E-06 6.8E-11 67.0 2.8 97 27-129 249-345 (936)
69 cd01232 PH_TRIO Trio pleckstri 97.9 0.00062 1.3E-08 43.0 11.3 98 26-126 4-113 (114)
70 KOG3531 Rho guanine nucleotide 97.9 1.5E-06 3.2E-11 70.0 -0.7 94 29-126 926-1020(1036)
71 KOG1451 Oligophrenin-1 and rel 97.9 5.7E-05 1.2E-09 59.2 7.7 98 25-124 263-366 (812)
72 KOG1117 Rho- and Arf-GTPase ac 97.9 8.7E-06 1.9E-10 66.0 3.0 99 21-128 81-180 (1186)
73 PF15408 PH_7: Pleckstrin homo 97.8 1.4E-05 3E-10 47.2 2.4 89 30-125 1-97 (104)
74 PF15406 PH_6: Pleckstrin homo 97.8 0.00019 4.1E-09 44.4 6.6 64 51-122 47-110 (112)
75 cd01231 PH_Lnk LNK-family Plec 97.7 0.0004 8.6E-09 42.4 7.0 76 40-123 18-106 (107)
76 KOG4236 Serine/threonine prote 97.6 9.8E-05 2.1E-09 57.9 4.1 98 26-128 412-526 (888)
77 KOG1117 Rho- and Arf-GTPase ac 97.5 0.0005 1.1E-08 56.3 7.4 93 28-124 493-600 (1186)
78 cd01228 PH_BCR-related BCR (br 97.4 0.0016 3.5E-08 39.4 7.2 87 27-124 3-93 (96)
79 cd01227 PH_Dbs Dbs (DBL's big 97.0 0.021 4.6E-07 37.1 9.5 83 43-128 29-118 (133)
80 PF15404 PH_4: Pleckstrin homo 96.7 0.023 5E-07 38.9 8.5 54 29-82 1-61 (185)
81 PF15411 PH_10: Pleckstrin hom 96.7 0.068 1.5E-06 33.9 10.1 93 25-121 5-116 (116)
82 cd01248 PH_PLC Phospholipase C 96.6 0.089 1.9E-06 33.1 10.2 73 44-122 22-113 (115)
83 KOG3549 Syntrophins (type gamm 96.2 0.032 6.9E-07 41.8 7.2 102 26-127 280-388 (505)
84 KOG1738 Membrane-associated gu 96.0 0.00048 1E-08 54.5 -3.1 66 23-93 558-626 (638)
85 KOG1737 Oxysterol-binding prot 95.8 0.01 2.2E-07 48.9 3.5 91 26-124 76-167 (799)
86 PF15405 PH_5: Pleckstrin homo 95.8 0.094 2E-06 34.2 7.3 96 28-124 2-134 (135)
87 KOG4407 Predicted Rho GTPase-a 95.6 0.00035 7.6E-09 59.3 -5.4 103 23-126 919-1042(1973)
88 KOG4424 Predicted Rho/Rac guan 95.6 0.013 2.9E-07 46.2 3.3 85 40-128 510-598 (623)
89 KOG3523 Putative guanine nucle 95.4 0.04 8.6E-07 43.9 5.4 81 42-122 498-591 (695)
90 KOG4807 F-actin binding protei 95.2 5.9E-05 1.3E-09 56.5 -10.1 81 41-124 33-113 (593)
91 KOG3727 Mitogen inducible gene 95.0 0.0038 8.3E-08 49.0 -1.1 83 40-128 372-461 (664)
92 KOG0248 Cytoplasmic protein Ma 94.3 0.024 5.1E-07 45.9 1.5 93 27-128 259-351 (936)
93 KOG3531 Rho guanine nucleotide 94.0 0.041 8.9E-07 45.4 2.4 99 27-129 750-848 (1036)
94 cd01255 PH_TIAM TIAM Pleckstri 93.7 1.3 2.8E-05 29.1 8.9 87 42-128 48-157 (160)
95 PF08458 PH_2: Plant pleckstri 93.4 0.33 7.2E-06 30.4 5.2 38 91-128 69-106 (110)
96 KOG1264 Phospholipase C [Lipid 93.1 0.24 5.2E-06 41.3 5.3 62 67-128 849-913 (1267)
97 KOG0517 Beta-spectrin [Cytoske 92.1 0.0024 5.2E-08 56.1 -7.2 98 28-126 2300-2410(2473)
98 KOG4047 Docking protein 1 (p62 91.5 0.18 3.8E-06 39.0 2.7 101 25-127 6-119 (429)
99 KOG3551 Syntrophins (type beta 91.1 0.17 3.7E-06 38.5 2.3 99 26-124 291-400 (506)
100 KOG2070 Guanine nucleotide exc 90.8 0.45 9.8E-06 37.4 4.3 80 42-123 324-404 (661)
101 KOG0705 GTPase-activating prot 90.0 0.32 6.9E-06 38.9 2.9 35 94-128 447-482 (749)
102 KOG2996 Rho guanine nucleotide 89.6 1.4 3.1E-05 35.5 6.2 105 23-130 402-516 (865)
103 KOG1170 Diacylglycerol kinase 85.3 0.018 4E-07 47.3 -6.3 94 29-128 4-97 (1099)
104 PF15277 Sec3-PIP2_bind: Exocy 84.5 6.8 0.00015 23.6 8.5 81 44-126 4-89 (91)
105 KOG3551 Syntrophins (type beta 81.7 2.4 5.2E-05 32.6 3.7 38 91-128 235-274 (506)
106 cd05394 RasGAP_RASA2 RASA2 (or 75.1 0.71 1.5E-05 34.4 -0.6 29 24-52 280-313 (313)
107 KOG1264 Phospholipase C [Lipid 73.2 6.7 0.00014 33.3 4.3 38 25-62 473-510 (1267)
108 cd05135 RasGAP_RASAL Ras GTPas 73.2 1.4 3.1E-05 33.2 0.6 27 25-51 301-333 (333)
109 KOG3520 Predicted guanine nucl 73.0 8.9 0.00019 33.6 5.1 59 70-131 666-727 (1167)
110 KOG0592 3-phosphoinositide-dep 71.7 18 0.00039 29.3 6.2 83 29-124 453-536 (604)
111 cd05134 RasGAP_RASA3 RASA3 (or 71.2 1.4 3E-05 32.9 0.1 28 25-52 278-310 (310)
112 KOG3521 Predicted guanine nucl 71.1 5 0.00011 33.0 3.1 99 25-129 425-530 (846)
113 cd05128 RasGAP_GAP1_like The G 63.2 2 4.3E-05 32.1 -0.4 27 25-51 284-315 (315)
114 PF04714 BCL_N: BCL7, N-termin 60.0 6.9 0.00015 20.9 1.4 20 41-60 28-47 (52)
115 PF06017 Myosin_TH1: Myosin ta 53.3 72 0.0016 22.0 9.8 84 26-117 49-138 (199)
116 KOG4095 Uncharacterized conser 42.9 12 0.00025 24.8 0.7 19 41-59 29-47 (165)
117 KOG0976 Rho/Rac1-interacting s 41.0 16 0.00035 31.0 1.4 98 29-127 814-921 (1265)
118 PF14470 bPH_3: Bacterial PH d 40.8 75 0.0016 18.5 9.1 76 42-122 20-95 (96)
119 KOG3518 Putative guanine nucle 33.4 47 0.001 25.4 2.7 39 90-128 394-435 (521)
120 KOG1729 FYVE finger containing 32.8 19 0.00042 26.6 0.6 85 42-128 59-143 (288)
121 cd01229 PH_etc2 Epithelial cel 32.5 1.4E+02 0.003 19.2 5.9 55 72-126 67-128 (129)
122 KOG1329 Phospholipase D1 [Lipi 29.8 46 0.00099 28.6 2.3 92 28-125 176-269 (887)
123 KOG0705 GTPase-activating prot 29.7 8.5 0.00018 31.3 -1.7 38 26-63 301-341 (749)
124 PLN02958 diacylglycerol kinase 28.1 1.1E+02 0.0023 24.5 4.0 27 102-128 82-108 (481)
125 COG4026 Uncharacterized protei 27.5 1.1E+02 0.0024 22.0 3.5 26 102-127 249-274 (290)
126 PF12213 Dpoe2NT: DNA polymera 26.5 46 0.00099 19.2 1.3 25 109-133 35-59 (73)
127 PF08394 Arc_trans_TRASH: Arch 23.8 1.1E+02 0.0024 15.2 2.7 19 94-112 12-30 (37)
128 cd01269 PLX Pollux (PLX) Phosp 23.5 1.6E+02 0.0034 19.1 3.4 24 103-126 103-126 (129)
129 PF10882 bPH_5: Bacterial PH d 23.2 1.7E+02 0.0038 17.3 3.9 24 91-114 69-92 (100)
130 cd05395 RasGAP_RASA4 Ras GTPas 21.4 22 0.00047 27.0 -0.9 24 28-51 302-331 (337)
131 PRK11370 YciI-like protein; Re 20.1 1.4E+02 0.0031 17.9 2.8 20 101-120 58-77 (99)
No 1
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.92 E-value=8.3e-24 Score=131.97 Aligned_cols=95 Identities=25% Similarity=0.553 Sum_probs=78.3
Q ss_pred eEEEEEeeCCC-CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeE----EeecCc-c-cCCCCceEEEEeCC
Q 041556 29 RSGWLTKQGDY-IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCL----TVRGAE-D-LLNKPFAFELSTGE 101 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~----~~~~~~-~-~~~~~~~f~i~~~~ 101 (143)
++|||.|+|+. .+.|++|||||+++.|+||+++. +..+.|.|+|..+. +....+ . .....++|.|.+++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~ 76 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL----DAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPE 76 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC----CcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCC
Confidence 58999999986 68999999999999999999988 67899999997542 222111 1 11234599999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
++|+|+|+|++|+.+||.||+.++..
T Consensus 77 Rty~l~a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 77 RKFLFACETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998764
No 2
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.91 E-value=1.2e-23 Score=130.71 Aligned_cols=94 Identities=22% Similarity=0.438 Sum_probs=81.2
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc---CCCCceEEEEeCCeE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL---LNKPFAFELSTGEYT 103 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~---~~~~~~f~i~~~~~~ 103 (143)
++++|||.|+++..+.|++|||||+++.|+||+++. +..+.+.|+|..+.+. ..++. .+++++|.|.+++++
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~-~~~~~~~~~~~~~~F~I~t~~rt 76 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDK----DPVERGVINLSTARVE-HSEDQAAMVKGPNTFAVCTKHRG 76 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCC----CccEeeEEEecccEEE-EccchhhhcCCCcEEEEECCCCE
Confidence 468999999999889999999999999999999988 6889999999976433 33221 246899999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q 041556 104 MYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
|+|+|+|++|+++||.||+...
T Consensus 77 ~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 77 YLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred EEEEcCCHHHHHHHHHHhhhhh
Confidence 9999999999999999997654
No 3
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.91 E-value=9e-24 Score=130.07 Aligned_cols=92 Identities=28% Similarity=0.498 Sum_probs=79.5
Q ss_pred eEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCc-cEEEeCCCeEEeecCcccC---CCCceEEEEeCC
Q 041556 29 RSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTP-RGVIPVGTCLTVRGAEDLL---NKPFAFELSTGE 101 (143)
Q Consensus 29 ~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~-~~~i~L~~~~~~~~~~~~~---~~~~~f~i~~~~ 101 (143)
.+|||.++++ .++.|++|||+|+++.|+||+... ...+ .++|+|..|..|....+.. .++++|.|.+++
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~----~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~ 77 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS----KDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD 77 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccC----ccCCCCceEEcccceEEeeccccccccccCcEEEEEcCC
Confidence 5899999988 789999999999999999999876 3334 4899999998877665421 347999999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
++|+|+|+|+++++.||.+|+.|
T Consensus 78 rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 78 KTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred ceEEEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999999999876
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.91 E-value=2.2e-23 Score=128.68 Aligned_cols=91 Identities=29% Similarity=0.641 Sum_probs=77.8
Q ss_pred ceEEEEEeeCCC----CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-e
Q 041556 28 ERSGWLTKQGDY----IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-Y 102 (143)
Q Consensus 28 ~~~G~L~k~~~~----~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~ 102 (143)
.++|||++++.. .+.|++|||||.++.|+||+++. +..+.+.|+|.++.+....+. .++++|+|.+++ +
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~~~~~~--~k~~~F~I~~~~~~ 74 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQ----DEKAEGLIFLSGFTIESAKEV--KKKYAFKVCHPVYK 74 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCC----CCccceEEEccCCEEEEchhc--CCceEEEECCCCCc
Confidence 368999998653 35999999999999999999998 678899999999855433232 588999999887 9
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+++|+|+|++++++||.||++|
T Consensus 75 ~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 75 SFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EEEEEeCCHHHHHHHHHHHHhC
Confidence 9999999999999999999764
No 5
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.90 E-value=3.5e-23 Score=129.80 Aligned_cols=94 Identities=20% Similarity=0.379 Sum_probs=78.0
Q ss_pred ceEEEEEeeCCCC-----CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccC------CCCceEE
Q 041556 28 ERSGWLTKQGDYI-----KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLL------NKPFAFE 96 (143)
Q Consensus 28 ~~~G~L~k~~~~~-----~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~------~~~~~f~ 96 (143)
+++|+|.|++.+. ..|++|||||.+++|+||+++.+. ...++|.|+|..+..++...+.. .++++|+
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~--~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~ 78 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK--RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ 78 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc--ccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence 4789999996533 389999999999999999998721 24799999999986666543321 3579999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 041556 97 LSTGEYTMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 97 i~~~~~~~~~~a~s~~e~~~Wi~al~~ 123 (143)
|.+++++||+.|+|++|+++||.||+.
T Consensus 79 i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 79 VVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999975
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.90 E-value=7.6e-23 Score=125.90 Aligned_cols=89 Identities=21% Similarity=0.459 Sum_probs=76.0
Q ss_pred eEEEEEeeCC--CCCCeeeEEEEEEC--CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEE
Q 041556 29 RSGWLTKQGD--YIKTWRRRWFILKQ--GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTM 104 (143)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~r~~vL~~--~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 104 (143)
.+|||.|+++ ..+.|++|||||.+ ..|+||+++. +..|.|.|+|.++..+.... ..++.|.|.+++++|
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----d~~p~G~I~L~~~~~~~~~~---~~~~~F~i~t~~r~y 73 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----DAKPLGRVDLSGAAFTYDPR---EEKGRFEIHSNNEVI 73 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----cccccceEECCccEEEcCCC---CCCCEEEEEcCCcEE
Confidence 3699999976 36899999999984 5899999988 68899999999975443322 247899999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHH
Q 041556 105 YFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~ 124 (143)
+|+|+|++|++.||.||+.+
T Consensus 74 ~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 74 ALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EEECCCHHHHHHHHHHHHhh
Confidence 99999999999999999865
No 7
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=3e-22 Score=122.17 Aligned_cols=89 Identities=28% Similarity=0.553 Sum_probs=75.4
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eEEEEE
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YTMYFV 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~~~~~ 107 (143)
++|||.|++...++|++|||||.++.|.||+++.+. ...++|.|+|..+.++ ..+ .+++.|.|...+ ++|+|.
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--~~~~~G~I~L~~~~i~-~~~---~~~~~F~i~~~~~r~~~L~ 74 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--SHGCRGSIFLKKAIIA-AHE---FDENRFDISVNENVVWYLR 74 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--cCCCcEEEECcccEEE-cCC---CCCCEEEEEeCCCeEEEEE
Confidence 479999999999999999999999999999998731 2457999999998544 222 357899996655 999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGR 123 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~ 123 (143)
|+|++|++.|+.||++
T Consensus 75 A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 75 AENSQSRLLWMDSVVR 90 (91)
T ss_pred eCCHHHHHHHHHHHhh
Confidence 9999999999999975
No 8
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.89 E-value=4.1e-22 Score=124.01 Aligned_cols=93 Identities=28% Similarity=0.568 Sum_probs=78.3
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEE--CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc------cCCCCceEEEEeC
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILK--QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED------LLNKPFAFELSTG 100 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~------~~~~~~~f~i~~~ 100 (143)
++|||.|+|+..+.|++|||||. ++.|.||+++. +..+.|.|+|..+..+..... .....+.|.|.++
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~ 76 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----DTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTS 76 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----CCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeC
Confidence 48999999998899999999999 45999999987 788999999998765543211 1134578999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 101 EYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
+++|+|+|++++|+.+|+.||+.++
T Consensus 77 ~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 77 KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CceEEEECCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999998764
No 9
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.89 E-value=9.5e-22 Score=126.86 Aligned_cols=95 Identities=41% Similarity=0.815 Sum_probs=80.7
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC------
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE------ 101 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~------ 101 (143)
.++|||.|+++..+.|++|||+|.++.|+||+++. +..+.+.|+|.++.+.. .++ ..++++|+|..++
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----~~~~~g~I~L~~~~v~~-~~~-~~~~~~F~i~~~~~~~~i~ 74 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENVSIRE-VED-PSKPFCFELFSPSDKQQIK 74 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----CCCceEEEECCCcEEEE-ccc-CCCCeeEEEECCccccccc
Confidence 36899999998889999999999999999999988 67899999999875433 322 2578999987654
Q ss_pred ---------------eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 ---------------YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 ---------------~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|+|+|+|++|+++|+.||++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 75 ACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred cccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 478899999999999999999988754
No 10
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.89 E-value=8e-22 Score=121.96 Aligned_cols=92 Identities=26% Similarity=0.584 Sum_probs=77.9
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECC------eEEEEccCCCCCC-CCCccEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQG------KLFWFKDSHNITP-GSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~------~l~~y~~~~~~~~-~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
++.++|||.|+ +.|++|||||++. .|.||+++++... ...|.++|+|..|..+...++. .++++|.|.
T Consensus 1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~-k~~~~f~i~ 75 (101)
T cd01257 1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADA-KHRHLIALY 75 (101)
T ss_pred CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeecccc-ccCeEEEEE
Confidence 46799999997 6899999999977 7999999873211 2679999999999877654442 457999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHH
Q 041556 99 TGEYTMYFVADTEKEKEEWINSIG 122 (143)
Q Consensus 99 ~~~~~~~~~a~s~~e~~~Wi~al~ 122 (143)
++++.|+|.|+|++|+++|+.+|.
T Consensus 76 t~dr~f~l~aese~E~~~Wi~~i~ 99 (101)
T cd01257 76 TRDEYFAVAAENEAEQDSWYQALL 99 (101)
T ss_pred eCCceEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999995
No 11
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.88 E-value=8.5e-22 Score=122.30 Aligned_cols=91 Identities=33% Similarity=0.606 Sum_probs=74.1
Q ss_pred eEEEEEeeCC---------CCCCeeeEEEEEEC-CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 29 RSGWLTKQGD---------YIKTWRRRWFILKQ-GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 29 ~~G~L~k~~~---------~~~~w~~r~~vL~~-~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
++|||.+.++ ..+.|++|||||.+ +.|+||++.. ....|+|.|+|..|..|....+..+++++|.|.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~ 77 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICIL 77 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC---CCcccceEEEccceEEEeecccccCCccEEEEE
Confidence 4799999754 24689999999985 6666665542 146789999999987776665544667999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHH
Q 041556 99 TGEYTMYFVADTEKEKEEWINSIG 122 (143)
Q Consensus 99 ~~~~~~~~~a~s~~e~~~Wi~al~ 122 (143)
+++++|||.|+|++|+++|+.+|.
T Consensus 78 tp~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 78 TPDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred CCCceEEEEeCCHHHHHHHHHHHH
Confidence 999999999999999999999985
No 12
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.87 E-value=2.8e-21 Score=121.67 Aligned_cols=92 Identities=29% Similarity=0.519 Sum_probs=75.6
Q ss_pred eEEEEEeeCC----CCCCeeeEEEEEECCe-------EEEEccCCCCCCCCCccEEEeCCCeEEeecCc----ccCCCCc
Q 041556 29 RSGWLTKQGD----YIKTWRRRWFILKQGK-------LFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE----DLLNKPF 93 (143)
Q Consensus 29 ~~G~L~k~~~----~~~~w~~r~~vL~~~~-------l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~----~~~~~~~ 93 (143)
.+|||.|+++ ..+.|++|||||.++. |.||+++. ...+.+.|+|..+..++... ......+
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~ 76 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGY 76 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC----CCccceEEECCccEEEcccccccccCcccce
Confidence 4799999987 3459999999999876 59999987 78899999999986654321 1123457
Q ss_pred eEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 94 AFELSTGEYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 94 ~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
.|.|.++.++|+|+|+|++|+++||.+|+..
T Consensus 77 ~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 77 GFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 7999999999999999999999999999753
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.85 E-value=3.2e-20 Score=113.15 Aligned_cols=88 Identities=31% Similarity=0.725 Sum_probs=76.3
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCC--CccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eEEE
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGS--TPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YTMY 105 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~~~ 105 (143)
++|||.|+++..+.|++|||+|.++.|+||+++. .. .+.+.|+|.++.+. ... ..+++|+|.+++ +.++
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~----~~~~~~~~~i~l~~~~~~-~~~---~~~~~F~i~~~~~~~~~ 72 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKS----SMRGKPRGTILLSGAVIS-EDD---SDDKCFTIDTGGDKTLH 72 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCc----cCCCCceEEEEeceEEEE-ECC---CCCcEEEEEcCCCCEEE
Confidence 5899999988789999999999999999999998 45 78999999997533 222 348999999876 9999
Q ss_pred EEcCCHHHHHHHHHHHHHH
Q 041556 106 FVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al~~~ 124 (143)
|+|+|.+|+..|+.||+.|
T Consensus 73 ~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 73 LRANSEEERQRWVDALELA 91 (91)
T ss_pred EECCCHHHHHHHHHHHHhC
Confidence 9999999999999999764
No 14
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.85 E-value=4.5e-20 Score=113.13 Aligned_cols=92 Identities=29% Similarity=0.623 Sum_probs=75.8
Q ss_pred eEEEEEeeCCC-CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEE
Q 041556 29 RSGWLTKQGDY-IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
++|||.++++. .+.|++|||+|.++.|+||+++.+. ...+.+.|+|..+.+ ...+....++++|+|.++++.++|+
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~--~~~~~~~i~l~~~~v-~~~~~~~~~~~~f~i~~~~~~~~f~ 77 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY--DNAHVKEIDLRRCTV-RHNGKQPDRRFCFEVISPTKTWHFQ 77 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc--ccccceEEeccceEE-ecCccccCCceEEEEEcCCcEEEEE
Confidence 58999998765 7899999999999999999998721 256778999988743 3333322378999999999999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGR 123 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~ 123 (143)
|+|+++++.|+.||+.
T Consensus 78 a~s~~~~~~Wi~al~~ 93 (94)
T cd01250 78 ADSEEERDDWISAIQE 93 (94)
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999999975
No 15
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.84 E-value=2.1e-20 Score=114.69 Aligned_cols=89 Identities=20% Similarity=0.421 Sum_probs=76.1
Q ss_pred EEEEEeeCCC-CCCeeeEEEEEEC----CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCe--
Q 041556 30 SGWLTKQGDY-IKTWRRRWFILKQ----GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEY-- 102 (143)
Q Consensus 30 ~G~L~k~~~~-~~~w~~r~~vL~~----~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~-- 102 (143)
.|||.|+++. .+.|++|||+|.+ +.|+||++.. +..|.+.|+|..+.+....+...++++||+|.++++
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~----~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~ 77 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPK----KTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPT 77 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCC----CCCccceeeccccEEEEccccccCCCeEEEEecCCCCe
Confidence 5999999887 8999999999986 9999999998 788999999999844433444457899999999875
Q ss_pred EEEEEcCCHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~ 123 (143)
.|+++|++ +|+++||.+|++
T Consensus 78 ~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 78 VYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred EEEEeCCH-HHHHHHHHHHhc
Confidence 78888888 999999999975
No 16
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.83 E-value=1.5e-19 Score=111.27 Aligned_cols=79 Identities=18% Similarity=0.342 Sum_probs=68.4
Q ss_pred CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-cCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH
Q 041556 41 KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-LLNKPFAFELSTGEYTMYFVADTEKEKEEWIN 119 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~ 119 (143)
..|++|||+|++..|+||+++. ..+.|.|+|..+..++...+ ...++++|+|.++++++||+|+|++|+++||.
T Consensus 19 ~n~KkRwF~Lt~~~L~Y~k~~~-----~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~ 93 (98)
T cd01244 19 LHFKKRYFQLTTTHLSWAKDVQ-----CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLN 93 (98)
T ss_pred cCCceeEEEECCCEEEEECCCC-----CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHH
Confidence 6899999999999999999765 67999999998766655433 34567999999999999999999999999999
Q ss_pred HHHHH
Q 041556 120 SIGRA 124 (143)
Q Consensus 120 al~~~ 124 (143)
||+.+
T Consensus 94 al~k~ 98 (98)
T cd01244 94 ALEKQ 98 (98)
T ss_pred HHhcC
Confidence 99753
No 17
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.81 E-value=2.8e-18 Score=106.12 Aligned_cols=97 Identities=31% Similarity=0.701 Sum_probs=82.0
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----cCCCCceEEEEeCCe-
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED----LLNKPFAFELSTGEY- 102 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~----~~~~~~~f~i~~~~~- 102 (143)
+++|||.+++...+.|++|||+|.++.|++|+++.. .....+.+.|+|.++.+...... ....+++|.|..+++
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~-~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~ 80 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKD-KSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGK 80 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTT-TTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCcc-ccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCc
Confidence 689999999977889999999999999999999872 12467899999999855443332 246789999999875
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
.++|+|+|++++..|+.+|+.++
T Consensus 81 ~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 81 SYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 18
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=1.6e-18 Score=107.99 Aligned_cols=90 Identities=32% Similarity=0.632 Sum_probs=67.0
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEE-CCeEEEEccCCCCCCCCCccEEEeCCCeEE----eecCcccCCCCceEEEEe--
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILK-QGKLFWFKDSHNITPGSTPRGVIPVGTCLT----VRGAEDLLNKPFAFELST-- 99 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~-~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~----~~~~~~~~~~~~~f~i~~-- 99 (143)
++++|||.|+++..+.|++|||+|. ++.|+||++.. .....+.++|.+..+ +...+ ..+++.|.|..
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~----~~~~~~~i~l~~~~v~~~~~~~~~--~~~~~~F~i~~~~ 74 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKP----EDGDPFLPPLNNFSVAECQLMKTE--RPRPNTFIIRCLQ 74 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCC----CccCccccccCCeEEeeeeeeecc--CCCcceEEEEecc
Confidence 3689999999999999999999999 78898888765 223345666666532 21112 25678999972
Q ss_pred ----CCeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 100 ----GEYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 100 ----~~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
.++ +|+|+|++|+++||.||+.+
T Consensus 75 ~~~~~~r--~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 75 WTTVIER--TFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred CCcccCE--EEEeCCHHHHHHHHHHHHhh
Confidence 234 45799999999999999875
No 19
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=1.5e-18 Score=122.39 Aligned_cols=97 Identities=41% Similarity=0.762 Sum_probs=82.4
Q ss_pred ccccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 24 WSNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
+.++..+|||.|.++ ..+.|++|||+|++++||||.-.. ++.|+|.|+|.+..+.+..+ ..+|+||.|..++
T Consensus 257 ffnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT----DKEPrGIIpLeNlsir~Ved--P~kP~cfEly~ps~ 330 (395)
T KOG0930|consen 257 FFNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIREVED--PKKPNCFELYIPSN 330 (395)
T ss_pred ccCccccceeeeecCCcccchhheeEEeecceeeeeeecc----CCCCCcceeccccceeeccC--CCCCCeEEEecCCC
Confidence 567999999999987 568999999999999999999887 89999999999864443333 3789999997542
Q ss_pred ---------------------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 102 ---------------------YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 102 ---------------------~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
..|-++|.+.+|+++||.+|+.++.
T Consensus 331 ~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 331 KGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred CcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 1577999999999999999998876
No 20
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.76 E-value=4.1e-17 Score=101.44 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=78.9
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCC-CCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNI-TPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMY 105 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~-~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~ 105 (143)
.+++|+|.|.+...+.|+.|||+|.++.|.|++..... ...-...+.++|.++.+.+... ...+|.|.|....++++
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~--~~~~~~F~I~~~~rsf~ 79 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDN--LERPHSFLVSGKQRCLE 79 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCC--CCcCceEEEecCCcEEE
Confidence 37899999999877899999999999999998864310 0122356789999975544322 25789999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHH
Q 041556 106 FVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al~~~~~ 126 (143)
++|+|++|+.+|+.||+.++.
T Consensus 80 l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 80 LQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEcCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999875
No 21
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=2.1e-17 Score=105.18 Aligned_cols=95 Identities=28% Similarity=0.618 Sum_probs=73.7
Q ss_pred ceEEEEEe-e-CCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC---cccCCCCceEEEEeC--
Q 041556 28 ERSGWLTK-Q-GDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA---EDLLNKPFAFELSTG-- 100 (143)
Q Consensus 28 ~~~G~L~k-~-~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~---~~~~~~~~~f~i~~~-- 100 (143)
...|||+. + .++.+.|++|||+|+++.|+||+.+.+ .....|.+.|+|.+|...... .+...+++.|.|...
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d-~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~ 80 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDD-EKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP 80 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCc-cccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence 46899996 3 346789999999999999999998774 224789999999998554332 234578999998531
Q ss_pred C-----------------eE-EEEEcCCHHHHHHHHHHHHH
Q 041556 101 E-----------------YT-MYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 101 ~-----------------~~-~~~~a~s~~e~~~Wi~al~~ 123 (143)
. +. ++|+|+|++|+++|+.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~ 121 (122)
T cd01263 81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS 121 (122)
T ss_pred cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence 1 22 67999999999999999975
No 22
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.75 E-value=8e-17 Score=102.07 Aligned_cols=100 Identities=25% Similarity=0.363 Sum_probs=77.8
Q ss_pred eEEEEEeeC-----C-----CCCCeeeEEEEEECCeEEEEccCCCCCCC---CCccEEEeCCCeEEeecCcccCCCCceE
Q 041556 29 RSGWLTKQG-----D-----YIKTWRRRWFILKQGKLFWFKDSHNITPG---STPRGVIPVGTCLTVRGAEDLLNKPFAF 95 (143)
Q Consensus 29 ~~G~L~k~~-----~-----~~~~w~~r~~vL~~~~l~~y~~~~~~~~~---~~~~~~i~L~~~~~~~~~~~~~~~~~~f 95 (143)
++|+|..+- + +.+.|+++||||+++.|++|+++...... ......|.|.++. +....++.+++++|
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~-~~ia~dy~Kr~~VF 80 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHAL-ATRASDYSKKPHVF 80 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccce-eEeeccccCCCcEE
Confidence 578887641 1 24689999999999999999998731111 2345688999874 33444556899999
Q ss_pred EEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 96 ELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 96 ~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
.|.++ ++.|+|+|.+.+||+.||.+|+.+++..+
T Consensus 81 ~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s 115 (117)
T cd01230 81 RLRTADWREFLFQTSSLKELQSWIERINVVAAAFS 115 (117)
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 99987 58999999999999999999999877543
No 23
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.72 E-value=1.2e-16 Score=99.93 Aligned_cols=94 Identities=18% Similarity=0.292 Sum_probs=68.3
Q ss_pred eEEEEEeeC--------CCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC
Q 041556 29 RSGWLTKQG--------DYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG 100 (143)
Q Consensus 29 ~~G~L~k~~--------~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~ 100 (143)
++|+|..+. ...+.|++|||+|.++.|++|+++............|++.++ .++..++..+++++|.|..+
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~-~i~~~~~~~k~~~~F~l~~~ 79 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGA-QCEVASDYTKKKHVFRLRLP 79 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCC-EEEecCCcccCceEEEEEec
Confidence 468887531 135689999999999999999987631111111126778775 34444444467899999755
Q ss_pred -CeEEEEEcCCHHHHHHHHHHHHH
Q 041556 101 -EYTMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 101 -~~~~~~~a~s~~e~~~Wi~al~~ 123 (143)
+..|+|+|++++++..|+.||+.
T Consensus 80 ~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 80 DGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc
Confidence 58999999999999999999975
No 24
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.72 E-value=2.3e-16 Score=94.78 Aligned_cols=96 Identities=22% Similarity=0.374 Sum_probs=79.2
Q ss_pred cceEEEEEeeCCC-C-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC---
Q 041556 27 PERSGWLTKQGDY-I-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE--- 101 (143)
Q Consensus 27 ~~~~G~L~k~~~~-~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~--- 101 (143)
+++.|||...+.+ + .+-+++||||++.+|+||+... ++.++++|+|++..+.+......+++|+|.|..++
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e----eKE~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rn 76 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE----EKEKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRN 76 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccc----cccccceeeccccEEEeecccccCCCcEEEEEcCcccc
Confidence 4788999987542 2 3579999999999999999998 78999999999975555555556889999999763
Q ss_pred -----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 102 -----YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 102 -----~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+.+.|+|+++++++.|.+++-+|..
T Consensus 77 vykd~k~lel~~~~~e~vdswkasflragv 106 (110)
T cd01256 77 VYKDYKQLELGCETLEEVDSWKASFLRAGV 106 (110)
T ss_pred cccchheeeecCCCHHHHHHHHHHHHhccc
Confidence 3567999999999999999977643
No 25
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=1.6e-16 Score=101.73 Aligned_cols=79 Identities=20% Similarity=0.494 Sum_probs=66.9
Q ss_pred CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-----------cCCCCceEEEEeCCeEEEEEcCC
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-----------LLNKPFAFELSTGEYTMYFVADT 110 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-----------~~~~~~~f~i~~~~~~~~~~a~s 110 (143)
.|++|||+|+++.|.||+++. +..+.++|.++....+..... .....+.|.|.+++|.+.|.|+|
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~----~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s 107 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPS----SAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKS 107 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCC----CCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCC
Confidence 699999999999999999998 778999999986444443221 13567999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 041556 111 EKEKEEWINSIGRA 124 (143)
Q Consensus 111 ~~e~~~Wi~al~~~ 124 (143)
+.++++|+.+|+.|
T Consensus 108 ~~~~~~Wi~~i~~a 121 (121)
T cd01254 108 SRKLKQWMASIEDA 121 (121)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999754
No 26
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=5.9e-16 Score=95.34 Aligned_cols=84 Identities=17% Similarity=0.439 Sum_probs=67.3
Q ss_pred CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC----eEEEEEcCCHHHH
Q 041556 39 YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE----YTMYFVADTEKEK 114 (143)
Q Consensus 39 ~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~----~~~~~~a~s~~e~ 114 (143)
.+++|++|||+++++.|+||+++.+. ...+...++|.+|.+. +......+++.|.+..+. +.|+|.|+|++++
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~--~~~p~i~lnl~gcev~-~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqy 92 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDS--NGAPIGQLNLKGCEVT-PDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQY 92 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhc--CCCCeEEEecCceEEc-ccccccccceEEEEecCCccCCeEEEEECCCHHHH
Confidence 35789999999999999999998732 3467778888898543 333223567999998775 8999999999999
Q ss_pred HHHHHHHHHHH
Q 041556 115 EEWINSIGRAI 125 (143)
Q Consensus 115 ~~Wi~al~~~~ 125 (143)
..||.|++.|.
T Consensus 93 a~Wmaa~rlas 103 (106)
T cd01237 93 AKWMAACRLAS 103 (106)
T ss_pred HHHHHHHHHhh
Confidence 99999998774
No 27
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.68 E-value=1.5e-15 Score=91.18 Aligned_cols=85 Identities=22% Similarity=0.627 Sum_probs=72.0
Q ss_pred EEEEee-CCCCCCeeeEEEEE--ECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEE
Q 041556 31 GWLTKQ-GDYIKTWRRRWFIL--KQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 31 G~L~k~-~~~~~~w~~r~~vL--~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
|||.|+ ....++|++|||+| ..+.|.||.++. +...+|.|++..+ ++... .+...|.|.++...|+|.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~----~~~~rGsi~v~~a-~is~~----~~~~~I~idsg~~i~hLK 71 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN----SGKLRGSIDVSLA-VISAN----KKSRRIDIDSGDEIWHLK 71 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC----CCeeEeEEEccce-EEEec----CCCCEEEEEcCCeEEEEE
Confidence 677776 44678999999999 899999999988 5678899999986 33222 356899999999999999
Q ss_pred cCCHHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGRA 124 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~ 124 (143)
|.|+++.+.|+.||+.+
T Consensus 72 a~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 72 AKSQEDFQRWVSALQKA 88 (89)
T ss_pred cCCHHHHHHHHHHHHhc
Confidence 99999999999999865
No 28
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.67 E-value=1.5e-15 Score=96.04 Aligned_cols=96 Identities=23% Similarity=0.438 Sum_probs=57.3
Q ss_pred eEEEEEeeCCC-CCCeeeEEEEEE-CCeEEEEccCCCCC---------CCCCccEEEeCCC----eEEeec-CcccCCCC
Q 041556 29 RSGWLTKQGDY-IKTWRRRWFILK-QGKLFWFKDSHNIT---------PGSTPRGVIPVGT----CLTVRG-AEDLLNKP 92 (143)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~r~~vL~-~~~l~~y~~~~~~~---------~~~~~~~~i~L~~----~~~~~~-~~~~~~~~ 92 (143)
++|||+|.+.. .++|++|||+|. ++.|.||+.+.... ......+.+.... ...+.. ........
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 58999999885 789999999999 99999999943110 0122233333221 111110 01111345
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 93 FAFELSTGEYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 93 ~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
..|.|.++.++++|.|++.+|+..|+.||++|
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 78889999999999999999999999999875
No 29
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.65 E-value=6.7e-15 Score=90.89 Aligned_cols=96 Identities=26% Similarity=0.364 Sum_probs=69.4
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEE
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
+++|+|.|..+. +.|+ |+|+|.++.|.|+.........-...+.++|.++.+.+ .++..+.+|+|+|.++++.+.++
T Consensus 3 ikEG~L~K~~~k-~~~~-R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~-~~~~~~~~~~F~I~~~~ks~~l~ 79 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQ-RMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEE-SEHEWGVPHCFTIFGGQCAITVA 79 (99)
T ss_pred eeEEEEEEEeCC-CCce-EEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEee-ccCCcCCceeEEEEcCCeEEEEE
Confidence 789999998653 3455 55556555555554332100012468899999985443 33333568999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~~~ 126 (143)
|.|++|+.+|+.+|+.++.
T Consensus 80 A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 80 ASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred CCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999875
No 30
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.65 E-value=1.2e-14 Score=88.69 Aligned_cols=97 Identities=28% Similarity=0.639 Sum_probs=78.2
Q ss_pred ceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-CCCCceEEEEeCCe-EE
Q 041556 28 ERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-LNKPFAFELSTGEY-TM 104 (143)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-~~~~~~f~i~~~~~-~~ 104 (143)
+++|||.++.. ....|+++||+|.++.|.+|+..... ....+...|+|.++.+....... ...+++|.|..+++ .+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~-~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~ 80 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAK-KDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSY 80 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCcc-ccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCCceE
Confidence 68999999876 66799999999999999999988721 11567889999998443332210 24689999998877 99
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q 041556 105 YFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~~ 125 (143)
+|+|+|++++..|+.+|+.++
T Consensus 81 ~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 81 LLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEcCCHHHHHHHHHHHHHhh
Confidence 999999999999999998775
No 31
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.63 E-value=1.2e-14 Score=92.87 Aligned_cols=96 Identities=27% Similarity=0.544 Sum_probs=64.2
Q ss_pred eEEEEEee-----CC-----CCCCeeeEEEEEECCeEEEEccCCCC-----C-----CCCCccEEEeCCCeEEeecCccc
Q 041556 29 RSGWLTKQ-----GD-----YIKTWRRRWFILKQGKLFWFKDSHNI-----T-----PGSTPRGVIPVGTCLTVRGAEDL 88 (143)
Q Consensus 29 ~~G~L~k~-----~~-----~~~~w~~r~~vL~~~~l~~y~~~~~~-----~-----~~~~~~~~i~L~~~~~~~~~~~~ 88 (143)
++|+|..+ ++ ..+.|+..|+||+++.|++|++.... . ....|...|.|.++. +....++
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~-a~~a~dY 80 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHAL-AEIASDY 80 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-E-EEEETTB
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceE-EEeCccc
Confidence 68999874 11 34689999999999999999984310 0 012244569999874 4446667
Q ss_pred CCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 89 LNKPFAFELSTG-EYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 89 ~~~~~~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
.+++|+|.|.+. +..|+|+|.|+++|.+||.+|+.+.
T Consensus 81 ~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 81 TKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp TTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred ccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 789999999987 5789999999999999999998764
No 32
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.58 E-value=4.6e-15 Score=89.94 Aligned_cols=103 Identities=21% Similarity=0.361 Sum_probs=77.9
Q ss_pred ceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeec--Cc-------ccCCCCceEEE
Q 041556 28 ERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRG--AE-------DLLNKPFAFEL 97 (143)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~--~~-------~~~~~~~~f~i 97 (143)
.++|||++.|+ .++.|++|||+|.+-..+-|.-..-..+...|.+.+.|+|.++.-. .+ +..+..+.|..
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~a 82 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNA 82 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhhhhe
Confidence 58999999998 7899999999999764444333222223578999999999865322 11 12245688888
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 98 STGEYTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 98 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
+..+..+.|+++++.|+..|+.||-+|..+.-+
T Consensus 83 vkegd~~~fa~~de~~r~lwvqa~yratgqshk 115 (117)
T cd01234 83 VKEGDELKFATDDENERHLWVQAMYRATGQSHK 115 (117)
T ss_pred eccCcEEEEeccchHHHHHHHHHHHHHcCcccC
Confidence 888999999999999999999999888765433
No 33
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.56 E-value=6.8e-14 Score=84.51 Aligned_cols=93 Identities=29% Similarity=0.657 Sum_probs=74.0
Q ss_pred eEEEEEeeCCCC-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eEEEE
Q 041556 29 RSGWLTKQGDYI-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YTMYF 106 (143)
Q Consensus 29 ~~G~L~k~~~~~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~~~~ 106 (143)
++|||.++.... ..|+++||+|.++.|.+|....... ...+.+.++|.++.+...... ...+++|.|...+ +.++|
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~-~~~~~~~i~l~~~~v~~~~~~-~~~~~~f~i~~~~~~~~~~ 78 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKK-SYKPKGSIPLSGAEVEESPDD-SGRKNCFEIRTPDGRSYLL 78 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCc-CCCCcceEEcCCCEEEECCCc-CCCCcEEEEecCCCcEEEE
Confidence 468998876544 7899999999999999999877200 157889999998644433322 2468999999886 99999
Q ss_pred EcCCHHHHHHHHHHHHH
Q 041556 107 VADTEKEKEEWINSIGR 123 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (143)
+|+|++++..|+.+|+.
T Consensus 79 ~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 79 QAESEEEREEWIEALQS 95 (96)
T ss_pred EeCCHHHHHHHHHHHhc
Confidence 99999999999999975
No 34
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.54 E-value=3e-13 Score=82.19 Aligned_cols=90 Identities=32% Similarity=0.622 Sum_probs=72.5
Q ss_pred EEEEEeeCCCC----CCeeeEEEEEECCeEEEEccCCCCCCCCCcc-EEEeCCCeEEeecCcccCCCCceEEEEeC---C
Q 041556 30 SGWLTKQGDYI----KTWRRRWFILKQGKLFWFKDSHNITPGSTPR-GVIPVGTCLTVRGAEDLLNKPFAFELSTG---E 101 (143)
Q Consensus 30 ~G~L~k~~~~~----~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~-~~i~L~~~~~~~~~~~~~~~~~~f~i~~~---~ 101 (143)
+|||.+.+... +.|+++||+|.++.|.+|+.+. ..... +.+++.... +....+....+++|.|... .
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~----~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~ 76 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDD----KKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGR 76 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCC----CCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCc
Confidence 68998887653 7899999999999999999987 34444 688888865 4443322246899999987 7
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+.++|+|+++++++.|+.+|+.+
T Consensus 77 ~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 77 RVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred EEEEEEcCCHHHHHHHHHHHhcC
Confidence 89999999999999999999753
No 35
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.37 E-value=3.6e-11 Score=74.68 Aligned_cols=98 Identities=21% Similarity=0.184 Sum_probs=73.7
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
.+++|-|.|... +..+.|+|+|.++.|.|-.... ....-...+.++|.++.+... .+....++.|+|.++.+++.+
T Consensus 4 li~eG~L~K~~r--k~~~~R~ffLFnD~LvY~~~~~-~~~~~~~~~~i~L~~~~v~~~-~d~~~~~n~f~I~~~~kSf~v 79 (104)
T cd01218 4 LVGEGVLTKMCR--KKPKQRQFFLFNDILVYGNIVI-SKKKYNKQHILPLEGVQVESI-EDDGIERNGWIIKTPTKSFAV 79 (104)
T ss_pred EEecCcEEEeec--CCCceEEEEEecCEEEEEEeec-CCceeeEeeEEEccceEEEec-CCcccccceEEEecCCeEEEE
Confidence 367999998763 3567789999999888743211 001223467899999754433 332356899999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhh
Q 041556 107 VADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+|+|++|+.+|+.+|..|+.+.
T Consensus 80 ~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 80 YAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred EcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765
No 36
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.35 E-value=2e-11 Score=75.79 Aligned_cols=93 Identities=17% Similarity=0.377 Sum_probs=76.4
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc----CCCCceEEEEeCCeE
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL----LNKPFAFELSTGEYT 103 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~----~~~~~~f~i~~~~~~ 103 (143)
+++|||-.-...-+.|||+|++|..+.+.+|++.. ...+...|+|..+..++..... ...+|||.|++.+.+
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~----~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~v 76 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES----GSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNV 76 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCC----CCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEE
Confidence 47999998877668899999999999999999988 7889999999998777654322 357899999999999
Q ss_pred EEEEcC--------------------CHHHHHHHHHHHHHH
Q 041556 104 MYFVAD--------------------TEKEKEEWINSIGRA 124 (143)
Q Consensus 104 ~~~~a~--------------------s~~e~~~Wi~al~~~ 124 (143)
||...+ ..+.++.|-.||++|
T Consensus 77 Y~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 77 YFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 998653 234568899999864
No 37
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.30 E-value=2.1e-10 Score=70.85 Aligned_cols=96 Identities=19% Similarity=0.502 Sum_probs=71.7
Q ss_pred eEEEEEeeCC-C---CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-------ccCCCCceEEE
Q 041556 29 RSGWLTKQGD-Y---IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-------DLLNKPFAFEL 97 (143)
Q Consensus 29 ~~G~L~k~~~-~---~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-------~~~~~~~~f~i 97 (143)
++|||..... . .++|++.|.|+.+..+++|..+.+.. ...|..+++++....+.... +....|+.|+|
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~-~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I 80 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKE-NSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQI 80 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcccc-CCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEE
Confidence 6899987543 2 35899999999999999999877321 23477788887632222211 22456899999
Q ss_pred EeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 98 STG--EYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 98 ~~~--~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
... .+.++|-|+++.|.+.|+.+|.+-+
T Consensus 81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 81 LYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred EeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 866 4889999999999999999998654
No 38
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.24 E-value=2.9e-12 Score=103.33 Aligned_cols=97 Identities=25% Similarity=0.529 Sum_probs=83.2
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEE--CCeEEEEccCCCCCCCCCccEEEeCCCeEEeec-CcccCCCCceEEEEeCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILK--QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRG-AEDLLNKPFAFELSTGE 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~-~~~~~~~~~~f~i~~~~ 101 (143)
.+.+.+|+|+|+|..++.|+.|||||. .++|+||++-. +..|+|.|+|.....+.. .+.....+-.|.+.+.+
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~e----dt~pkG~IdLaevesv~~~~~k~vdekgffdlktt~ 1707 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFE----DTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTN 1707 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeecccc----cccccchhhhhhhhhhcccCccccCccceeeeehhh
Confidence 355679999999999999999999996 57999999998 789999999987544433 23334678899999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
++|-|+|.+...+++|+..|+.++
T Consensus 1708 rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1708 RVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHHHHHhccchHHHHHHHHHHHhh
Confidence 999999999999999999999875
No 39
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.23 E-value=6.1e-11 Score=73.38 Aligned_cols=97 Identities=16% Similarity=0.279 Sum_probs=68.2
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----cCCCCceEEEEeC----
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED----LLNKPFAFELSTG---- 100 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~----~~~~~~~f~i~~~---- 100 (143)
.+|+|+.+..+.++|+++||+|+.+-|+|+.... .....+..+...+++..+...... ....+++|.|..+
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgk-sk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~ 80 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEK-TKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQS 80 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCC-cCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCc
Confidence 5899999988889999999999999998877655 111222334556666433322211 1234689988654
Q ss_pred ---CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 101 ---EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 101 ---~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
....+|+|+++..+..|+.|||-+.-
T Consensus 81 ~~s~~ik~lCaeDe~t~~~W~ta~Ri~Ky 109 (114)
T cd01259 81 KGSQSIKYLCAEDLPTLDRWLTAIRIAKY 109 (114)
T ss_pred ccchhheeeccCCHHHHHHHHHHHHHHhh
Confidence 12468999999999999999986643
No 40
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=99.22 E-value=3.1e-11 Score=94.43 Aligned_cols=99 Identities=19% Similarity=0.357 Sum_probs=82.4
Q ss_pred cceEEEEEeeCC-----CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-ccCCCCceEEEEeC
Q 041556 27 PERSGWLTKQGD-----YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-DLLNKPFAFELSTG 100 (143)
Q Consensus 27 ~~~~G~L~k~~~-----~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-~~~~~~~~f~i~~~ 100 (143)
+.++|.|.++.. +.+.+|+|||.|+...|.|.|++. ..+.+.|+|..+..++..+ ...+.+|+|+|+..
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~-----~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~ 639 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG-----KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHT 639 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCc-----cCcccceeHHHHHHHHHhhhhccCCCceEEEEec
Confidence 456777777633 225789999999999999999986 7789999999876666543 34678999999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 101 EYTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
+++.|++|.+..|..+|+++|+++...+..
T Consensus 640 drtly~Q~~n~vEandWldaL~kvs~~N~~ 669 (800)
T KOG2059|consen 640 DRTLYVQAKNCVEANDWLDALRKVSCCNQN 669 (800)
T ss_pred CcceeEecCCchHHHHHHHHHHHHhccCcc
Confidence 999999999999999999999999777653
No 41
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.22 E-value=9.4e-10 Score=69.01 Aligned_cols=96 Identities=20% Similarity=0.368 Sum_probs=68.9
Q ss_pred ceEEEEEeeC--CCCCCeeeEEEEEECCeEEEEccCCCCCC--CCCccEEEeCC-CeEEeecCc-------ccCCCCceE
Q 041556 28 ERSGWLTKQG--DYIKTWRRRWFILKQGKLFWFKDSHNITP--GSTPRGVIPVG-TCLTVRGAE-------DLLNKPFAF 95 (143)
Q Consensus 28 ~~~G~L~k~~--~~~~~w~~r~~vL~~~~l~~y~~~~~~~~--~~~~~~~i~L~-~~~~~~~~~-------~~~~~~~~f 95 (143)
.++|||.... +..++|++.|.|+.+..|++|..+.+... ...+.-+++++ +...+.... +....|+.|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 4799998753 33579999999999999999998773211 12344567884 432332211 224568999
Q ss_pred EEEeC-------CeEEEEEcCCHHHHHHHHHHHHH
Q 041556 96 ELSTG-------EYTMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 96 ~i~~~-------~~~~~~~a~s~~e~~~Wi~al~~ 123 (143)
+|... ....+|-|+++.|.+.|+.||..
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 99752 47789999999999999999964
No 42
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.20 E-value=6.1e-10 Score=69.99 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=73.8
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCC-------CCCccEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITP-------GSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~-------~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
..+++|-|.+.....+..+.|+|+|.++.|.|-+....... .-..++.++|..+.+....+ ...-+|.|.|.
T Consensus 3 elI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d-~~~~knaF~I~ 81 (112)
T cd01261 3 EFIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPD-SSEYKNAFEII 81 (112)
T ss_pred cccccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCC-CcccCceEEEE
Confidence 45789999988765567899999999999988776441000 01224567888764443332 22458999999
Q ss_pred eC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 99 TG-EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 99 ~~-~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+. ++.+.|+|.|.++..+|+.+|..++.
T Consensus 82 ~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 82 LKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred cCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 75 68899999999999999999988764
No 43
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.18 E-value=6.6e-10 Score=68.42 Aligned_cols=92 Identities=17% Similarity=0.439 Sum_probs=61.3
Q ss_pred eEEEEEeeCC--CCCCeeeEEEEEECC--eE---EEEccC-CCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC
Q 041556 29 RSGWLTKQGD--YIKTWRRRWFILKQG--KL---FWFKDS-HNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG 100 (143)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~r~~vL~~~--~l---~~y~~~-~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~ 100 (143)
++|||+.+.. ....|.+.||..... .+ .+.... .+..........|.|..|++ ...+. ..+.+||.|..+
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~-r~~~~-~dRRFCFei~~~ 78 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSR-RKTES-IDKRFCFDVEVE 78 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccc-cccCC-ccceeeEeeeec
Confidence 5799999854 334799999998753 32 222221 00001222334677777743 33332 378999999877
Q ss_pred Ce--EEEEEcCCHHHHHHHHHHHH
Q 041556 101 EY--TMYFVADTEKEKEEWINSIG 122 (143)
Q Consensus 101 ~~--~~~~~a~s~~e~~~Wi~al~ 122 (143)
.+ ++.|+|+|+.+...||.||.
T Consensus 79 ~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 79 EKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred CCCCeEEEEecCHHHHHHHHHhhc
Confidence 65 79999999999999999984
No 44
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.16 E-value=7.9e-11 Score=86.11 Aligned_cols=101 Identities=27% Similarity=0.571 Sum_probs=71.6
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEE-CCeEEEEccCCCCC-CCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILK-QGKLFWFKDSHNIT-PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~-~~~l~~y~~~~~~~-~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
.+++++|||+|+|...+.|+.|||+|. ++.+.-|+.+.+.. ....|...+.+.+|..... + ..+|+.|.|....
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~--e-rPrPntFiiRcLQW 89 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKT--E-RPRPNTFIIRCLQW 89 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhc--c-CCCCceEEEEeeee
Confidence 467899999999999999999999996 78899898776311 1112333333444422211 1 3689999997653
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 ---YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 ---~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
-.-.|.++|.+++++|+.||+.+.+..
T Consensus 90 TTVIERTF~ves~~eRq~W~~AIq~vsn~l 119 (516)
T KOG0690|consen 90 TTVIERTFYVESAEERQEWIEAIQAVSNRL 119 (516)
T ss_pred eeeeeeeeecCCHHHHHHHHHHHHHHhhhh
Confidence 223488999999999999999887654
No 45
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=99.15 E-value=1.5e-09 Score=67.28 Aligned_cols=92 Identities=23% Similarity=0.373 Sum_probs=68.3
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECC-eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQG-KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~-~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~ 103 (143)
..++++|.+.|+.+.+ .++|+++|+++ .|+|++... ...+|.|+++....++. .....|.|.+++++
T Consensus 11 e~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~-----~~~KGeI~~~~~l~v~~-----k~~~~F~I~tp~Rt 78 (104)
T PF14593_consen 11 ELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK-----MVLKGEIPWSKELSVEV-----KSFKTFFIHTPKRT 78 (104)
T ss_dssp --EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT-----TEEEEEE--STT-EEEE-----CSSSEEEEEETTEE
T ss_pred CeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC-----CeECcEEecCCceEEEE-----ccCCEEEEECCCcE
Confidence 4468999999998764 89999999988 666666654 56789999997655544 33579999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
|+|.. ...++..|+.+|+.+...+.
T Consensus 79 Y~l~d-~~~~A~~W~~~I~~~~~~~~ 103 (104)
T PF14593_consen 79 YYLED-PEGNAQQWVEAIEEVKKQYY 103 (104)
T ss_dssp EEEE--TTS-HHHHHHHHHHHHHHHH
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHhc
Confidence 99987 44568889999999987653
No 46
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=99.11 E-value=2.6e-10 Score=91.69 Aligned_cols=107 Identities=24% Similarity=0.471 Sum_probs=84.2
Q ss_pred ccceEEEEEee--CCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc---ccCCCCceEEEEe-
Q 041556 26 NPERSGWLTKQ--GDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE---DLLNKPFAFELST- 99 (143)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~---~~~~~~~~f~i~~- 99 (143)
++.+.|||+.- +.++..|.|+||+|.++.+.|.+.+.+.. .+.|.+.|+|..|+.-...+ +...++|.|.|..
T Consensus 989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEk-rK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen 989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEK-RKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhc-ccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence 45678999874 44677899999999999999999887643 67899999999996643332 3367899999872
Q ss_pred --------C----Ce-EEEEEcCCHHHHHHHHHHHHHHHHhhcCCCC
Q 041556 100 --------G----EY-TMYFVADTEKEKEEWINSIGRAIVQHSRSVT 133 (143)
Q Consensus 100 --------~----~~-~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~ 133 (143)
+ .+ ...|+|++.++++.|+.+|..++.......+
T Consensus 1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~LRsW~~ 1114 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQLRSWRN 1114 (1116)
T ss_pred cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 23 5679999999999999999999887765544
No 47
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.89 E-value=1.7e-09 Score=66.42 Aligned_cols=97 Identities=18% Similarity=0.321 Sum_probs=72.2
Q ss_pred ccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC-CeE
Q 041556 26 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-EYT 103 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-~~~ 103 (143)
+++..||+.|.|+ +...|++|||.|-.+.|-+|.... ......|.+.....|.......+..+|+.|... +..
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~-----~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k 76 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESE-----ANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKK 76 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeeccccc-----ccCCcEEEeehhhhcchhheeeccCceEEEEEcCCce
Confidence 5689999999876 568999999999999999975443 345556666654333222122255788988654 667
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
+++.++++.+..+|...|+.+-..
T Consensus 77 ~vlt~~d~i~l~qW~~elr~a~r~ 100 (116)
T cd01240 77 IVLTNSDEIELKQWKKELRDAHRE 100 (116)
T ss_pred EEEecCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999877543
No 48
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=98.83 E-value=4.9e-08 Score=77.64 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=76.0
Q ss_pred ccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC-cccCCC--CceEEEEe
Q 041556 26 NPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA-EDLLNK--PFAFELST 99 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~-~~~~~~--~~~f~i~~ 99 (143)
.+.++|||+..|. +.....+|||||.+..+.|||.+... ...|.....++++..|+.. ....+. -+.|.|++
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~--~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn 80 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQD--NQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 80 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCcc--ccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence 4679999999765 45678999999999999999986521 3456677777766555443 222122 36777775
Q ss_pred C---CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 G---EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 ~---~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
. ++...|.|.+.+|+..|+.||+.++.+.
T Consensus 81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 4 5678899999999999999999999865
No 49
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.77 E-value=5.1e-09 Score=84.98 Aligned_cols=105 Identities=23% Similarity=0.449 Sum_probs=81.7
Q ss_pred cccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeE
Q 041556 25 SNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~ 103 (143)
.+....|+|+++.. ..+.|.+|||...++.+.|+..-. ........+|..|.+. ...+...+++||+|++++++
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~----~~~~~~~~dL~~csvk-~~~~~~drr~CF~iiS~tks 346 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGA----DAENVLIEDLRTCSVK-PDAEQRDRRFCFEIISPTKS 346 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccc----cccccccccchhcccc-CCcccccceeeEEEecCCcc
Confidence 34556788887755 478999999999998888887765 3333567778887543 33333368999999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhcCCCCc
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHSRSVTE 134 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~~ 134 (143)
+.|+|+++.+.+.||.+|+..+.........
T Consensus 347 ~~lQAes~~d~~~Wi~~i~nsi~s~l~~~~~ 377 (785)
T KOG0521|consen 347 YLLQAESEKDCQDWISALQNSILSALNSAFL 377 (785)
T ss_pred eEEecCchhHHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999998887554443
No 50
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=98.76 E-value=3.9e-08 Score=75.24 Aligned_cols=101 Identities=17% Similarity=0.350 Sum_probs=69.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc----CCCCceEEEEeC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL----LNKPFAFELSTG 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~----~~~~~~f~i~~~ 100 (143)
+.+.++|+|+.+..+.+.||+.||||+...|||+-..+. ....+..+..++.+..+....... ....++|-|...
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~ts-k~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~ 393 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTS-KEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPN 393 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCCC-CCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeec
Confidence 457799999999999999999999999999998776651 112223334555543232222211 123577777643
Q ss_pred -----Ce-EEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 101 -----EY-TMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 101 -----~~-~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+ .-+|+|+++..+..|+.||+-+..
T Consensus 394 ~~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 394 KLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred cccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 22 358999999999999999996643
No 51
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.76 E-value=6.2e-07 Score=55.85 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=69.8
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-----CCCCceEEEEeC--
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-----LNKPFAFELSTG-- 100 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-----~~~~~~f~i~~~-- 100 (143)
+++|-|.+.+.....=+.|+++|.++.|.|-+...-....-..++.|.|..+.++...+.. ..-+|.|.|...
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~ 82 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSEST 82 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCC
Confidence 6789988876422233689999999999998864311112346788999998666554432 123789999876
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHH
Q 041556 101 EYTMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~al~~ 123 (143)
+..+.|+|.|.++...|+.||..
T Consensus 83 ~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 83 DEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CeEEEEEECCHHHHHHHHHHHHH
Confidence 46799999999999999999964
No 52
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.76 E-value=4.9e-07 Score=55.51 Aligned_cols=91 Identities=20% Similarity=0.300 Sum_probs=67.8
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC---e
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE---Y 102 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~---~ 102 (143)
..+++|.+...+. =+.|+.+|.+..|.+-+...+ .-..+..|.+++..+.+..+ ..++.|.|.... +
T Consensus 3 eLlleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~---~y~~K~~i~~~~l~i~e~~~---~d~~~F~v~~~~~p~~ 72 (97)
T cd01222 3 DLLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD---KYQFKAYIPCKNLMLVEHLP---GEPLCFRVIPFDDPKG 72 (97)
T ss_pred ceeeeceEEeecC----CCceEEEEecccEEEEEecCC---eeEEEEEEEecceEEecCCC---CCCcEEEEEecCCCce
Confidence 4567888875543 256999999999999887652 23345577777765555444 348999997653 6
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+.|+|.|.++.+.|+.+|+.++.
T Consensus 73 ~~~l~A~s~e~K~~W~~~i~~~i~ 96 (97)
T cd01222 73 ALQLTARNREEKRIWTQQLKRAML 96 (97)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhh
Confidence 899999999999999999998763
No 53
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=98.69 E-value=3e-08 Score=76.61 Aligned_cols=109 Identities=21% Similarity=0.235 Sum_probs=80.8
Q ss_pred CCccccccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC-CCCCccEEEeCCCeEEeecCcccCCCCceEE
Q 041556 18 YTGIEFWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT-PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFE 96 (143)
Q Consensus 18 ~~~~~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~-~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~ 96 (143)
...+.+-...+++|.+.|.......-+.||++|.+..+.|-+...-.. ........+.+.++.+.+.. ....++.|.
T Consensus 263 ~dIV~PsreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~--~~~~~~tF~ 340 (623)
T KOG4424|consen 263 EDIVSPSRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDD--NEELPHTFI 340 (623)
T ss_pred ccccCcHHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcccc--cccCCceEE
Confidence 334555567799999999987667889999999998887766544211 11223345566665433222 225689999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 97 LSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 97 i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+..+.+.+.|+|.|+++..+|+++|+.+|...
T Consensus 341 ~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~ 372 (623)
T KOG4424|consen 341 LTGKKRGVELQARTEQEKKEWVQAIQDAIDKH 372 (623)
T ss_pred EecccceEEeecCchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998764
No 54
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.67 E-value=1.5e-07 Score=58.64 Aligned_cols=93 Identities=22% Similarity=0.400 Sum_probs=64.0
Q ss_pred EEEEeeCC----CCCCeeeEEEEEECCeEEEEccCCCC-CCCCCccEEEeCC--CeEEeecCcccC---CCCceEEEEeC
Q 041556 31 GWLTKQGD----YIKTWRRRWFILKQGKLFWFKDSHNI-TPGSTPRGVIPVG--TCLTVRGAEDLL---NKPFAFELSTG 100 (143)
Q Consensus 31 G~L~k~~~----~~~~w~~r~~vL~~~~l~~y~~~~~~-~~~~~~~~~i~L~--~~~~~~~~~~~~---~~~~~f~i~~~ 100 (143)
|||..+-. ..+.|+.+|++|+++.|++|+..... ..=..|....+|- -...+...+... +++++|.|.+.
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg 82 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTG 82 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcC
Confidence 78877622 24789999999999999999987631 0112233444443 111222222222 67899999987
Q ss_pred C--eEEEEEcCCHHHHHHHHHHHHH
Q 041556 101 E--YTMYFVADTEKEKEEWINSIGR 123 (143)
Q Consensus 101 ~--~~~~~~a~s~~e~~~Wi~al~~ 123 (143)
. ..++|..++..|+..|..||++
T Consensus 83 ~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 83 TQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CceeeEEEEecCHHHHHHHHHHHhc
Confidence 5 5789999999999999999974
No 55
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.64 E-value=3e-07 Score=71.54 Aligned_cols=99 Identities=19% Similarity=0.317 Sum_probs=66.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--ccCCCCceEEEEe-CC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DLLNKPFAFELST-GE 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~~f~i~~-~~ 101 (143)
.+....||+.+.+...+ |++|||.+.++.+.+........ .......+.+.....+.+.+ ....++++|.|.+ .+
T Consensus 375 sDv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~-~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~ 452 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPEN-DGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNG 452 (478)
T ss_pred CCcccceEEeccCCCcc-hhhheEEecCCceEEEecccccc-CCCCCccccHHHhcccccccHHhcCCCCceEEEEecCC
Confidence 46778999999887554 99999999988777664433111 12222333332221222221 1235789999965 46
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
+.++|.|+|++++++|+.+|+.++
T Consensus 453 ~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 453 QKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred cEEEEecCChHHHHHHHHHHHHHh
Confidence 788899999999999999999886
No 56
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.59 E-value=9.1e-07 Score=52.94 Aligned_cols=86 Identities=21% Similarity=0.278 Sum_probs=66.6
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCC-eEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGT-CLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~-~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
++.|.+.++.+. .+++|-++|++.--.+|-++. ....+|.|+++. ...++. .....|.|.+++++|+|
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~----~~~~KgeIp~s~~~l~v~~-----~~~~~F~I~Tp~rty~l 70 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV----KKVVKGEIPWSDVELRVEV-----KNSSHFFVHTPNKVYSF 70 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCC----cCeEEeEecccccceEEEE-----ecCccEEEECCCceEEE
Confidence 568899988775 679999999987555566655 477889999988 544443 34589999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q 041556 107 VADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~ 125 (143)
. +....+..|+.+|..+.
T Consensus 71 e-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 71 E-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred E-CCCCCHHHHHHHHHHHh
Confidence 5 44578899999997653
No 57
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=98.59 E-value=9.6e-09 Score=80.39 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=84.6
Q ss_pred ccccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEee--cCcccCCCCceEEEEeC
Q 041556 24 WSNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVR--GAEDLLNKPFAFELSTG 100 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~--~~~~~~~~~~~f~i~~~ 100 (143)
..+...+|||+..|. .++.|++|||+|..-..|.|.-+.-..+...|...|.|+|.++.- +.+...+.++.|..+..
T Consensus 461 p~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~ffnavke 540 (1218)
T KOG3543|consen 461 PPNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKE 540 (1218)
T ss_pred CCccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHHHHHhcc
Confidence 345667999999876 478999999999865444444333222357899999999985532 22334566788888888
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCCCc
Q 041556 101 EYTMYFVADTEKEKEEWINSIGRAIVQHSRSVTE 134 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~~ 134 (143)
+.+..|..+++.++..|+.||-++..+..++++.
T Consensus 541 gdtvifasddeqdr~lwvqamyratgqsykpvpp 574 (1218)
T KOG3543|consen 541 GDTVIFASDDEQDRHLWVQAMYRATGQSYKPVPP 574 (1218)
T ss_pred CceEEeccCchhhhhHHHHHHHHhhCCcCCCCCc
Confidence 9999999999999999999999999888777664
No 58
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.57 E-value=3.4e-08 Score=76.25 Aligned_cols=104 Identities=24% Similarity=0.363 Sum_probs=71.5
Q ss_pred cccceEEEEEee----------CCCCCCeeeEEEEEECCeEEEEccCCCCC---CCCCccEEEeCCCeEEeecCcccCCC
Q 041556 25 SNPERSGWLTKQ----------GDYIKTWRRRWFILKQGKLFWFKDSHNIT---PGSTPRGVIPVGTCLTVRGAEDLLNK 91 (143)
Q Consensus 25 ~~~~~~G~L~k~----------~~~~~~w~~r~~vL~~~~l~~y~~~~~~~---~~~~~~~~i~L~~~~~~~~~~~~~~~ 91 (143)
....+.|+|..+ ..+.++|+..|-+|++-.||+-++.-... ...+....|.+..+ ..++..++.++
T Consensus 504 a~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lknavsvHHA-LAt~AtdY~KK 582 (774)
T KOG0932|consen 504 AATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLKNAVSVHHA-LATPATDYSKK 582 (774)
T ss_pred chhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhhhhhhhhhh-hcCCCcccccC
Confidence 345578888764 12456899999999999888877543110 00011122333332 23455677889
Q ss_pred CceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 92 PFAFELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 92 ~~~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+|+|.|.+. .+.|+|+|.+.+||+.||..|+-+.+.-+
T Consensus 583 p~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fS 621 (774)
T KOG0932|consen 583 PHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFS 621 (774)
T ss_pred CceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999886 69999999999999999999987766543
No 59
>PLN02866 phospholipase D
Probab=98.47 E-value=4.5e-06 Score=69.20 Aligned_cols=100 Identities=17% Similarity=0.405 Sum_probs=73.7
Q ss_pred cccceEEEEEee------CC-----CC---------CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeE----
Q 041556 25 SNPERSGWLTKQ------GD-----YI---------KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCL---- 80 (143)
Q Consensus 25 ~~~~~~G~L~k~------~~-----~~---------~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~---- 80 (143)
..-.+||++.|+ ++ .. ..|+++|++++++.|.|..++. +..+..++.++...
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~----~~~~~~v~lfD~~~~~~~ 255 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPF----DAKPLDIIVFDVLPASNG 255 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCC----CCceeEEEEEeccccccc
Confidence 445689999998 21 11 2599999999999999997777 56677777655211
Q ss_pred ----EeecCc---ccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 81 ----TVRGAE---DLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 81 ----~~~~~~---~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.+.... +...-++.|.|.+.++.+.|.|.|...+..|+.+|+.+....
T Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~ 310 (1068)
T PLN02866 256 NGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRP 310 (1068)
T ss_pred CCCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhcc
Confidence 111111 112447899999999999999999999999999999997543
No 60
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.43 E-value=1.2e-05 Score=49.93 Aligned_cols=100 Identities=19% Similarity=0.232 Sum_probs=71.6
Q ss_pred cccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 23 FWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
.+.++++-.-+..+......-..||++|..+.|++...... ..+....|.++|.+..+. ..++..+.++.|+|..+-
T Consensus 8 ~lG~vi~mS~V~~~~~~~qe~~eRyLvLFp~~LlilS~s~r-~sGf~yqGkLPL~~i~v~-~lEd~e~~~~aFeI~G~li 85 (111)
T cd01225 8 TLGNVIHMSQVAVQYGAGEEKRERYLVLFPNVLLMLSASPR-MSGFIYQGKLPLTGIIVT-RLEDTEALKNAFEISGPLI 85 (111)
T ss_pred hcCceEEEEEEEEecCCccccceeEEEEcCceEEEEEcCCC-ccceEEeeeecccccEEe-chHhccCccceEEEeccCc
Confidence 34556666666655544456689999999998887765331 113456788999997544 344434678999998763
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
....+.|.++.|+.+|+..|++.
T Consensus 86 ~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 86 ERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred CcEEEEeCCHHHHHHHHHHHHhh
Confidence 56778899999999999999864
No 61
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=98.42 E-value=1.8e-05 Score=50.83 Aligned_cols=99 Identities=16% Similarity=0.270 Sum_probs=66.0
Q ss_pred cceEEEEEeeCCCC-----CCeeeEEEEEEC--CeEEEEccCCC-CCCCCCccEEEeCCCeEEeecCccc--CC----CC
Q 041556 27 PERSGWLTKQGDYI-----KTWRRRWFILKQ--GKLFWFKDSHN-ITPGSTPRGVIPVGTCLTVRGAEDL--LN----KP 92 (143)
Q Consensus 27 ~~~~G~L~k~~~~~-----~~w~~r~~vL~~--~~l~~y~~~~~-~~~~~~~~~~i~L~~~~~~~~~~~~--~~----~~ 92 (143)
.....||+|.++.. ....+|||.|.. .+|+|...... ..........+.|.....+...... .. ..
T Consensus 9 ~~~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~ 88 (123)
T PF12814_consen 9 LMIGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHN 88 (123)
T ss_pred hhcccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccc
Confidence 34456888865432 578999999986 68888775431 0011122345667665454433211 11 35
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 93 FAFELSTGEYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 93 ~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
++|.|.+++|.+-|.|++.++.+-|+.+|+--+
T Consensus 89 ~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 89 KSIIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred eEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 788888999999999999999999999997543
No 62
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=98.37 E-value=7.2e-08 Score=74.71 Aligned_cols=126 Identities=24% Similarity=0.436 Sum_probs=89.0
Q ss_pred chhhhhhCCCCCCCCCCccccccccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCe
Q 041556 3 NIWRALSGQDPNPEDYTGIEFWSNPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTC 79 (143)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~ 79 (143)
+-|.-+++-++....+ =++...++..+|-|..+.+ +++.|+.|||.|.+..|.|.+.... +..-.+.|+|...
T Consensus 712 N~W~Cf~CnnPeKa~y-Fvn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~---~dS~~~~IDl~~I 787 (851)
T KOG3723|consen 712 NAWQCFMCNNPEKATY-FVNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK---DDSDDCPIDLSKI 787 (851)
T ss_pred CccceeecCChHHeee-eecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCC---CCCCCCCccHHHh
Confidence 4466666666544433 2334466788999986543 5678999999999999999666551 1122367888776
Q ss_pred EEeecCc---ccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCC
Q 041556 80 LTVRGAE---DLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQHSRSV 132 (143)
Q Consensus 80 ~~~~~~~---~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~ 132 (143)
..|.... ....-+..|.|.+.+.++.|.|.++..+++|++.|+-+++.+....
T Consensus 788 RSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~r~ 843 (851)
T KOG3723|consen 788 RSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKERE 843 (851)
T ss_pred hhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHHHH
Confidence 5554222 1123478999999999999999999999999999998887665433
No 63
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.31 E-value=2.5e-05 Score=47.97 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=65.8
Q ss_pred ceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 28 ERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
+++|-|..... ..+.-++..++|-+..|.+-.-..+ ..=.....++|.+..++.. .+...-++.|.|.++.+++.+
T Consensus 3 i~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~--~ky~~~~~~~L~~i~V~ni-~D~~~~kNafki~t~~~s~i~ 79 (100)
T cd01226 3 ILYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAA--GKYVMESTYSLNSVAVVNV-KDRENAKKVLKLLIFPESRIY 79 (100)
T ss_pred EEcCcEEEechhhCCccceEEEEEeccEEEEEEeccc--ceEEEEEEEehHHeEEEec-CCCcCcCceEEEEeCCccEEE
Confidence 45666665543 3345566657777777766533221 0223455888888654433 333356999999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q 041556 107 VADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~ 125 (143)
+|+|.++..+|+..|.++.
T Consensus 80 qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 80 QCESARIKTEWFEELEQAK 98 (100)
T ss_pred EeCCHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 64
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=98.28 E-value=2e-06 Score=65.62 Aligned_cols=93 Identities=26% Similarity=0.538 Sum_probs=74.4
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEE
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
..+|+|.+.......|+.||++|+.+.|.||++..+. ....+|.|.|..+ .+...+ ..-+.|.|......+++.
T Consensus 25 e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~--~hGcRgsi~l~ka-~i~ahE---fDe~rfdIsvn~nv~~lr 98 (611)
T KOG1739|consen 25 ERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDET--EHGCRGSICLSKA-VITAHE---FDECRFDISVNDNVWYLR 98 (611)
T ss_pred hhcceeeeeecccccccceEEEEcccchhhhhhhhhh--hcccceeeEeccC-Cccccc---chhheeeeEeccceeeeh
Confidence 3577777777666789999999999999999998742 4568889999876 232222 346889998888899999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~~~ 126 (143)
+.+.+..+.|+.+|.....
T Consensus 99 a~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 99 AQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred hcCcHHHHHHHHHHHHHhh
Confidence 9999999999999987655
No 65
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.12 E-value=1.3e-05 Score=62.79 Aligned_cols=99 Identities=17% Similarity=0.327 Sum_probs=58.9
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECC-----eEEEEccCCCCC---------CCCCccEEE--eCCCeEEeecCcc-c
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQG-----KLFWFKDSHNIT---------PGSTPRGVI--PVGTCLTVRGAED-L 88 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~-----~l~~y~~~~~~~---------~~~~~~~~i--~L~~~~~~~~~~~-~ 88 (143)
-.+.+|.+.+.++.+ .|++||+.+.+. .+.- +...+.. ++......| +++....+-+.+. +
T Consensus 372 ~~~~~g~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (496)
T PTZ00283 372 LTLYEGIVKKQSSDL-SWKRRYLCIRGELEKGETLTV-DVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKY 449 (496)
T ss_pred ceeeeeEEecccCCc-ccceeEEEEeeecccCceeec-CCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHh
Confidence 356788888876655 499999988732 2211 1111000 000001111 2332222222222 2
Q ss_pred C--CCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 89 L--NKPFAFELST-GEYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 89 ~--~~~~~f~i~~-~~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
. +.+|.|-+.. +++.+.|+|.+.++++.||++|++++.
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 450 TGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred hCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 2 3589999964 588999999999999999999998865
No 66
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.06 E-value=0.0001 Score=46.47 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=65.4
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCC--CCccEEEeCCCeEEeecC-ccc----CCCCceEEEEe
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPG--STPRGVIPVGTCLTVRGA-EDL----LNKPFAFELST 99 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~--~~~~~~i~L~~~~~~~~~-~~~----~~~~~~f~i~~ 99 (143)
+...|.|.........-+.||.+|.+..+.+-+........ -.-+..+.|..+.+.+.. .+. ....|.|.|..
T Consensus 4 ~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~ 83 (116)
T cd01223 4 PLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAH 83 (116)
T ss_pred cccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEe
Confidence 34556666554433346799999999999888876521100 112334555554333221 111 13468899987
Q ss_pred CC--eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 GE--YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 ~~--~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.. ..+.|+|.|+++...|+.+|..|....
T Consensus 84 ~~~~~~~~f~~Ktee~K~kWm~al~~a~sni 114 (116)
T cd01223 84 KQGKTGFTFYFKTEHLRKKWLKALEMAMSNI 114 (116)
T ss_pred cCCCccEEEEeCCHHHHHHHHHHHHHHHhcC
Confidence 64 568999999999999999999887643
No 67
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.05 E-value=0.00014 Score=46.57 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=47.3
Q ss_pred CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc----------CCCCceEEEEe------CCeEEE
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL----------LNKPFAFELST------GEYTMY 105 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~----------~~~~~~f~i~~------~~~~~~ 105 (143)
.-+.+|++|.++.|.+-+.+.. .........+.... .++..+.. ...+|.|+|.- ....+.
T Consensus 26 ~~~~vylfLFnDlLl~tkkK~~--~~f~V~dy~~r~~l-~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~ 102 (125)
T cd01221 26 KARTIYLFLFNDLLLITKKKLG--STFVVFDYAPRSFL-RVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELL 102 (125)
T ss_pred cCCcEEEEEecceEEEEEecCC--CeEEEEeeccccce-EEeecccccccccccccccCCCceEEEEeeccCCCCEEEEE
Confidence 3467899999999999876541 00011011112221 12211110 13589999962 246799
Q ss_pred EEcCCHHHHHHHHHHH
Q 041556 106 FVADTEKEKEEWINSI 121 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al 121 (143)
|+|+|+.|+.+||.||
T Consensus 103 L~a~S~sdr~rWi~Al 118 (125)
T cd01221 103 LSADSQSDRERWLSAL 118 (125)
T ss_pred EECCCHHHHHHHHHhc
Confidence 9999999999999998
No 68
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.04 E-value=3.1e-06 Score=67.02 Aligned_cols=97 Identities=24% Similarity=0.527 Sum_probs=77.1
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
..+.||+.+.+...+.|++||||++.+++.||+.+... ...+.+.+++.....+... .....|++++....++|
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~--~~~p~s~~d~~s~~~~~~~----~~s~~fqli~~t~~~~~ 322 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNR--DEEPASKIDIRSVTKLEQQ----GAAYAFQLITSTDKMNF 322 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCc--cccccCcccccccceeecc----chhHHhhhhhhceeEEE
Confidence 45678888888777899999999999999999988732 3456777777753333332 35789999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhhc
Q 041556 107 VADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
-+++..-..+|+..|+..+....
T Consensus 323 ~~~s~~lt~dw~~iL~~~iKv~~ 345 (936)
T KOG0248|consen 323 MTESERTTHDWVTILSAAIKATT 345 (936)
T ss_pred eccChhhhhhhHHHHHHHHHHHh
Confidence 99999999999999988876543
No 69
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.93 E-value=0.00062 Score=43.05 Aligned_cols=98 Identities=16% Similarity=0.229 Sum_probs=61.9
Q ss_pred ccceEEEEEeeCCC---CCCeeeEEEEEECCeEEEEccCCCCCCCCCc----cEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 26 NPERSGWLTKQGDY---IKTWRRRWFILKQGKLFWFKDSHNITPGSTP----RGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 26 ~~~~~G~L~k~~~~---~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~----~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
..++.|.+....+. .+.-+.|-++|....|.+-+...+......+ +..|.++.....+..+ +.+..|.|.
T Consensus 4 ~Ll~Q~~f~v~~~~~~~~~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v~---gd~~kF~i~ 80 (114)
T cd01232 4 KLLLQDTFQVWDPKAGLIQKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHVE---GDPCRFALW 80 (114)
T ss_pred ceEEEccEEEEeCCccccCCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEccC---CCCceEEEE
Confidence 34566666655332 2345678888888888887765421111122 2456666653333333 346667664
Q ss_pred --eCC---eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 99 --TGE---YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 99 --~~~---~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+. ..|.++|.|.++.+.|+..|+.++.
T Consensus 81 ~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 81 SGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred eCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 333 6899999999999999999988754
No 70
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=97.93 E-value=1.5e-06 Score=70.01 Aligned_cols=94 Identities=23% Similarity=0.428 Sum_probs=74.7
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC-cccCCCCceEEEEeCCeEEEEE
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA-EDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~-~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
..|+|..+-..-++|++.|.|...-+|++||+-+ +..+..+++|-|+++-.+. ++...+.++|.+.-.+..|+|.
T Consensus 926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~q----D~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffr 1001 (1036)
T KOG3531|consen 926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQ----DSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFR 1001 (1036)
T ss_pred hhHHHHHHhhccccceeeeeeecceeeEeecccc----cccccccccccccccCCCCCCCCcchhheeeeehhhhHHHHh
Confidence 3455443322334899999999999999999999 8889999999987543332 3345678999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~~~ 126 (143)
|++.-....|+..|+.+-.
T Consensus 1002 aes~yt~~rw~evi~~a~~ 1020 (1036)
T KOG3531|consen 1002 AESYYTFERWMEVITDAPS 1020 (1036)
T ss_pred hhhhhhhhhHHHHhhcCCc
Confidence 9999999999999976543
No 71
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=97.92 E-value=5.7e-05 Score=59.20 Aligned_cols=98 Identities=15% Similarity=0.332 Sum_probs=67.6
Q ss_pred cccceEEEEEeeC--CCCCCeeeEEEEEECC--eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC
Q 041556 25 SNPERSGWLTKQG--DYIKTWRRRWFILKQG--KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~--~~~~~w~~r~~vL~~~--~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~ 100 (143)
..++++|||+.+. .....|.+.||+.... .+..-.-.+....+..+...+.|..|+.. ..+...+.+||.|...
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~RR--ktdSIdKRFCFDve~~ 340 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSRR--KTDSIDKRFCFDVEVE 340 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhccC--cccccccceeeeeeec
Confidence 5578999999874 3456999999999754 22222222211223345667888887442 3333467899999876
Q ss_pred --CeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 101 --EYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 101 --~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
..+..++|-+++++..|+.||--+
T Consensus 341 erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 341 ERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred ccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 457889999999999999998544
No 72
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.90 E-value=8.7e-06 Score=66.01 Aligned_cols=99 Identities=25% Similarity=0.418 Sum_probs=82.0
Q ss_pred cccccccceEEEEEeeCCCC-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEe
Q 041556 21 IEFWSNPERSGWLTKQGDYI-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST 99 (143)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~ 99 (143)
..+++.+++.|||.|..... ...++||..+.+..+.||.+.+ ..-+.+.+.+...+.+.. ...+.|++++
T Consensus 81 s~~isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k----~py~k~~i~va~is~v~~-----~gd~kfevit 151 (1186)
T KOG1117|consen 81 STPISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPK----DPYSKGPIPVAAISAVRN-----FGDNKFEVIT 151 (1186)
T ss_pred CCccCchhhcchhhccCcCcccccCccceecCCCCccccCCCC----CCCCCCceeeehhhhhhh-----ccCceEEEEe
Confidence 33456688999999976543 4689999999999999999998 677888888887544422 3468999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 ~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
..+.+.|.++++.+...|+..++++....
T Consensus 152 n~r~fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 152 NQRTFVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred cceEEEEecCCcccceeeechhhhcchhh
Confidence 99999999999999999999999887665
No 73
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.84 E-value=1.4e-05 Score=47.24 Aligned_cols=89 Identities=15% Similarity=0.275 Sum_probs=60.9
Q ss_pred EEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeec-CcccCCC------CceEEEEeCCe
Q 041556 30 SGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRG-AEDLLNK------PFAFELSTGEY 102 (143)
Q Consensus 30 ~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~-~~~~~~~------~~~f~i~~~~~ 102 (143)
+|||+..... .-++|+.+|++..+.+|..+. ....+++.|+......+ ....... .++|..+.+++
T Consensus 1 EGYLY~~E~~--si~rRF~~L~~K~~~~~~~KG-----G~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~ 73 (104)
T PF15408_consen 1 EGYLYRDEDS--SIQRRFVMLRSKQFNMYEDKG-----GQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSR 73 (104)
T ss_pred CCeEEEeccc--hHHHHHHhhhhceeEEecccC-----CceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCc
Confidence 5899887543 678999999999999998875 56678888876322111 1111111 23555566654
Q ss_pred E-EEEEcCCHHHHHHHHHHHHHHH
Q 041556 103 T-MYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 103 ~-~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
. .-+.|++.+.++.||++|+.-.
T Consensus 74 ~~~~~FA~S~~~~~~Wi~~mN~~s 97 (104)
T PF15408_consen 74 RHVQCFASSKKVCQSWIQVMNSPS 97 (104)
T ss_pred chhhhhhhHHHHHHHHHHHhcChh
Confidence 4 5677999999999999996543
No 74
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.75 E-value=0.00019 Score=44.42 Aligned_cols=64 Identities=16% Similarity=0.389 Sum_probs=48.2
Q ss_pred ECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHH
Q 041556 51 KQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSIG 122 (143)
Q Consensus 51 ~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~ 122 (143)
++..|.+|....+ ...|.|+|+|...+.++. ...+.|.+...+....|+|.+..|++.|+.+|.
T Consensus 47 TGKGLLF~~K~~d---ka~P~GiinLadase~~~-----~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 47 TGKGLLFFSKAED---KASPSGIINLADASEPEK-----DGSNKFHFKIKGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred cCceEEEEecccc---ccCCcceEehhhcccccc-----CCCceEEEEeCCceeeeecCCHHHhccHHHHhh
Confidence 4556666664332 568999999987544322 345777777788999999999999999999985
No 75
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.68 E-value=0.0004 Score=42.45 Aligned_cols=76 Identities=16% Similarity=0.382 Sum_probs=50.4
Q ss_pred CCCeeeEEEEEE----CCeEEEEcc--CCCCCCCCCccEEEeCC------CeEEeecCcccCCCCceEEEEeC-CeEEEE
Q 041556 40 IKTWRRRWFILK----QGKLFWFKD--SHNITPGSTPRGVIPVG------TCLTVRGAEDLLNKPFAFELSTG-EYTMYF 106 (143)
Q Consensus 40 ~~~w~~r~~vL~----~~~l~~y~~--~~~~~~~~~~~~~i~L~------~~~~~~~~~~~~~~~~~f~i~~~-~~~~~~ 106 (143)
...|+++-.+|. +..+.+|.. ++ ...|+-.+... .++..+. ..+.+.|.|.-. +..|.|
T Consensus 18 ~~~WqkcRl~L~~~~gg~~le~~~~~pPK----ssrpk~~v~C~~I~EvR~tt~LEm----PD~~nTFvLK~~~~~eyI~ 89 (107)
T cd01231 18 GARWQRGRLVLRKAVGGYMLEFYLPLPPK----SSKPKLQVACSSISEVRECTRLEM----PDNLYTFVLKVDDNTDIIF 89 (107)
T ss_pred ccccceeeEEEEecCCCceEEEEccCCCC----CCCCccccchhhhhhhhhcccccc----cCcccEEEEEecCCceEEE
Confidence 347988888885 345555555 44 34444433322 2322322 356899999754 567999
Q ss_pred EcCCHHHHHHHHHHHHH
Q 041556 107 VADTEKEKEEWINSIGR 123 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (143)
.|.+.++++.|+..|+.
T Consensus 90 Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 90 EVGDEQQLNSWLAELRY 106 (107)
T ss_pred EcCCHHHHHHHHHHHhc
Confidence 99999999999999974
No 76
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.56 E-value=9.8e-05 Score=57.92 Aligned_cols=98 Identities=18% Similarity=0.358 Sum_probs=73.0
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-----cCCCCceEEEEeC
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-----LLNKPFAFELSTG 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-----~~~~~~~f~i~~~ 100 (143)
...++||+-.....-+--+++|..|....+..|.+.. .......|+|+.+..+..... ....+|||.|++.
T Consensus 412 t~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s----~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~ 487 (888)
T KOG4236|consen 412 TKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNES----TNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTA 487 (888)
T ss_pred hhhhcceEEEEechhhhhhhhhheeccceeEeeecCC----CceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEee
Confidence 3567888877654334557888899999999999988 677788999988766655442 2356899999998
Q ss_pred CeEEEEEcCC------------HHHHHHHHHHHHHHHHhh
Q 041556 101 EYTMYFVADT------------EKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 101 ~~~~~~~a~s------------~~e~~~Wi~al~~~~~~~ 128 (143)
..+| |-.++ .+.++.|-.||+.+.+.-
T Consensus 488 ~~vy-fVge~p~~~~~~~~g~g~d~a~~w~~ai~~alMpV 526 (888)
T KOG4236|consen 488 TTVY-FVGENPSSTPGGESGVGLDAAQGWETAIQQALMPV 526 (888)
T ss_pred eEEE-EecCCCCCCccccccccchhhccCchhhhhccccc
Confidence 8544 44555 455889999999887643
No 77
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.49 E-value=0.0005 Score=56.27 Aligned_cols=93 Identities=23% Similarity=0.413 Sum_probs=71.0
Q ss_pred ceEEEEEeeCCC----------CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEE--eecCccc--CCCCc
Q 041556 28 ERSGWLTKQGDY----------IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLT--VRGAEDL--LNKPF 93 (143)
Q Consensus 28 ~~~G~L~k~~~~----------~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~--~~~~~~~--~~~~~ 93 (143)
..+|+|+..... .-.-.++||||.++.|+||.+.+ ...|.+.|++..... +...+.. ....+
T Consensus 493 ~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----S~tP~~lI~~~Eivclav~~pd~~pn~~~~f 568 (1186)
T KOG1117|consen 493 FLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----STTPNGLININEIVCLAVHPPDTYPNTGFIF 568 (1186)
T ss_pred cccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC----CCCCCceeeccceEEEeecCCCCCCCcCcee
Confidence 356999985321 12467999999999999999998 788999999987433 3222222 23468
Q ss_pred eEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 94 AFELSTG-EYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 94 ~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
.|.|..+ ++.+.|-+++.++...|..++.+.
T Consensus 569 ~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 569 IFEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred EEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 8888766 788999999999999999998755
No 78
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.42 E-value=0.0016 Score=39.44 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=57.5
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC---CCCCccEEEeCCCeEEeecCcccCCCCceEEE-EeCCe
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT---PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL-STGEY 102 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~---~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i-~~~~~ 102 (143)
.+.+|+|.+.-.+ .-+.|-|+|.++.|.|-+-..... ..-...-.|+|+..... .. .|.+ .++++
T Consensus 3 Lv~eg~lvel~~~--~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~-~~--------~~~~~~~~~K 71 (96)
T cd01228 3 LVKDSFLVELVEG--SRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFP-SE--------PFRIHNKNGK 71 (96)
T ss_pred ccccceeeeehhC--CCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheec-ch--------hhhccccCCc
Confidence 3578898886543 457788888888887765432100 01123347888874322 21 1444 45689
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+|.|.|.|..|..+|+.+|+..
T Consensus 72 Sf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 72 SYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred eEEEEecCHHHHHHHHHHHHHH
Confidence 9999999999999999999764
No 79
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.96 E-value=0.021 Score=37.05 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=54.3
Q ss_pred eeeEEEEEECCeEEEEccCCCCCC-CCCc----cEEEeCCCeEEeecCcccCCCCceEEEEeC--CeEEEEEcCCHHHHH
Q 041556 43 WRRRWFILKQGKLFWFKDSHNITP-GSTP----RGVIPVGTCLTVRGAEDLLNKPFAFELSTG--EYTMYFVADTEKEKE 115 (143)
Q Consensus 43 w~~r~~vL~~~~l~~y~~~~~~~~-~~~~----~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~--~~~~~~~a~s~~e~~ 115 (143)
-+.|..+|.+..+.+.+...+... ...| +..|.+......+.. .+.+..|.|-.. ...|.++|.|.+..+
T Consensus 29 ~~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglte~v---~gd~~kFeiw~~~~~~~yilqA~t~e~K~ 105 (133)
T cd01227 29 PMQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGITENV---KGDTKKFEIWYNAREEVYILQAPTPEIKA 105 (133)
T ss_pred CceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecccccccC---CCCccEEEEEeCCCCcEEEEEcCCHHHHH
Confidence 467888999988888876642110 1122 223444433222222 245778887544 467999999999999
Q ss_pred HHHHHHHHHHHhh
Q 041556 116 EWINSIGRAIVQH 128 (143)
Q Consensus 116 ~Wi~al~~~~~~~ 128 (143)
.|+..|+..+...
T Consensus 106 ~Wv~~I~~iL~~Q 118 (133)
T cd01227 106 AWVNEIRKVLTSQ 118 (133)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887655
No 80
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.71 E-value=0.023 Score=38.94 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=37.7
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCC-------CccEEEeCCCeEEe
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGS-------TPRGVIPVGTCLTV 82 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~-------~~~~~i~L~~~~~~ 82 (143)
+.|.|+.+......++++++||..+.|..|..-.....+. ...-+|+|..|.+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYvY 61 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYVY 61 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceEE
Confidence 4799998887777899999999999999998733110011 11236788877553
No 81
>PF15411 PH_10: Pleckstrin homology domain
Probab=96.70 E-value=0.068 Score=33.91 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=60.4
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCC---------CCc------cEEEeCCCeEEeecCcccC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPG---------STP------RGVIPVGTCLTVRGAEDLL 89 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~---------~~~------~~~i~L~~~~~~~~~~~~~ 89 (143)
......|-+..... ..|+...+.|....|.+.+........ ... +|.|.+...+.+.... .
T Consensus 5 G~Lll~g~~~V~k~--~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s--~ 80 (116)
T PF15411_consen 5 GELLLHGTLTVGKD--DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSS--K 80 (116)
T ss_pred cceEEccEEEEEeC--CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccC--C
Confidence 34456677766654 479999999999999999866642110 111 2334444333332222 2
Q ss_pred CCCceEEEEeC----CeEEEEEcCCHHHHHHHHHHH
Q 041556 90 NKPFAFELSTG----EYTMYFVADTEKEKEEWINSI 121 (143)
Q Consensus 90 ~~~~~f~i~~~----~~~~~~~a~s~~e~~~Wi~al 121 (143)
...+.++|.-. ...+.|.+.++++++.|-.+|
T Consensus 81 ~g~~~L~i~w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 81 PGSYSLQISWKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred CCceEEEEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 45688888652 357899999999999998875
No 82
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.55 E-value=0.089 Score=33.13 Aligned_cols=73 Identities=22% Similarity=0.441 Sum_probs=46.5
Q ss_pred eeEEEEEE--CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-------------CCCCceEEEEeCC----eEE
Q 041556 44 RRRWFILK--QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-------------LNKPFAFELSTGE----YTM 104 (143)
Q Consensus 44 ~~r~~vL~--~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-------------~~~~~~f~i~~~~----~~~ 104 (143)
+++.|.|. +..++|....+ .....++|+....+...... .....+|.|+... ..+
T Consensus 22 ~~~~f~ld~~~~~l~W~~~~~------~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L 95 (115)
T cd01248 22 RRRLFRLDEKGFFLYWKDEGK------KEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSL 95 (115)
T ss_pred eeEEEEEcCCCcEEEEeCCCC------ccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEE
Confidence 56777775 45566654332 14556676654333222110 1345899997653 468
Q ss_pred EEEcCCHHHHHHHHHHHH
Q 041556 105 YFVADTEKEKEEWINSIG 122 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~ 122 (143)
.|-|+|.++++.|+..|+
T Consensus 96 ~lVA~s~~~a~~W~~gL~ 113 (115)
T cd01248 96 DLVAPSEEEAKTWVSGLR 113 (115)
T ss_pred EEEECCHHHHHHHHHHHh
Confidence 999999999999999986
No 83
>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]
Probab=96.18 E-value=0.032 Score=41.76 Aligned_cols=102 Identities=19% Similarity=0.308 Sum_probs=66.2
Q ss_pred ccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCC-CCccEEEeCCC--eEEeecCcccCCCCceEEEEe
Q 041556 26 NPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPG-STPRGVIPVGT--CLTVRGAEDLLNKPFAFELST 99 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~-~~~~~~i~L~~--~~~~~~~~~~~~~~~~f~i~~ 99 (143)
.+.+-||....-. ....++.+|..|++..++.|..+.-..-+ ..+..++.+-. +.++...+-.-.+++||.|..
T Consensus 280 qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPPv~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~qs 359 (505)
T KOG3549|consen 280 QIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPPVNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQS 359 (505)
T ss_pred eEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCCcchhhhhhhhhhHHHHHHHHHHhccccccccccceEEEEc
Confidence 4567899887533 24567899999999999999877520000 00000111100 011111221236899999987
Q ss_pred C-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 100 G-EYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 100 ~-~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
. +...||..+...|+.+|-.++++|+.-
T Consensus 360 ~~ge~~yfsVEl~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 360 SGGEPRYFSVELRSELARWENSFQAATFT 388 (505)
T ss_pred CCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence 6 577999999999999999999988654
No 84
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=95.98 E-value=0.00048 Score=54.46 Aligned_cols=66 Identities=26% Similarity=0.547 Sum_probs=48.3
Q ss_pred cccccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCc
Q 041556 23 FWSNPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPF 93 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~ 93 (143)
.+.....+||+++... +...|++-||||.+..|++|.+.+ ...+..+|.|.+.+ +....+..++++
T Consensus 558 ~l~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~----~~~~e~~i~l~~~~-i~~a~e~~~~~~ 626 (638)
T KOG1738|consen 558 LLGRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHR----VRAAESVIKLPLFT-ISVAEEVLGKPE 626 (638)
T ss_pred HhccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhh----hhchhheeeccchh-hhhHHHhccCHh
Confidence 3445667889987653 235799999999999999999999 78888999998863 333433323333
No 85
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=95.80 E-value=0.01 Score=48.87 Aligned_cols=91 Identities=20% Similarity=0.298 Sum_probs=63.6
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEe-CCeEE
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST-GEYTM 104 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~-~~~~~ 104 (143)
....+|||.+.....++|.+|||++.++.+.||..... ....+.+.+++... .+... ....+.+.. ....+
T Consensus 76 ~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~--~~~~~~~~~~~~~a-~i~~~-----~~~~~~~~~~~~q~~ 147 (799)
T KOG1737|consen 76 GASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSF--SKTTCGGGINLVTA-WIQNG-----ERMDICSVDGSCQIY 147 (799)
T ss_pred cccccceeeccccccCCcccceEEecCcceeeeccCCc--cccCCCCccccccc-ccccC-----CCcccchhhcccchh
Confidence 34568999999888889999999999999999987663 13445666666543 22111 122222222 24567
Q ss_pred EEEcCCHHHHHHHHHHHHHH
Q 041556 105 YFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~ 124 (143)
+..+.+..+.+.|+.+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~l~ 167 (799)
T KOG1737|consen 148 LVELSKKLQRQGWLHALELA 167 (799)
T ss_pred hhhhhHHHhhcchhhhhhhc
Confidence 78888999999999999877
No 86
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=95.77 E-value=0.094 Score=34.17 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=42.8
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCC--CCCCCccEEEeCCCeEEeecCc-------------------
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNI--TPGSTPRGVIPVGTCLTVRGAE------------------- 86 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~--~~~~~~~~~i~L~~~~~~~~~~------------------- 86 (143)
++.|-|.+++.....|....++|.++.|.+-+.+... ..-...+..|+|+-. .++..+
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL-~l~~~~d~~~~~~~~~r~s~s~~~~ 80 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELL-VLESMDDPPPQRSIAKRPSSSLISS 80 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG--EEEE--TTTS---------S-----
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHe-eeecccCCCcccCcccccccCccCC
Confidence 5788888888766678899999999988887765310 001112234444432 111100
Q ss_pred -------------ccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 87 -------------DLLNKPFAFELSTG---EYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 87 -------------~~~~~~~~f~i~~~---~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
......+.|.+..- +..+.|+|+|..+++.|+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 00122355555543 345789999999999999999765
No 87
>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]
Probab=95.63 E-value=0.00035 Score=59.32 Aligned_cols=103 Identities=17% Similarity=0.278 Sum_probs=73.6
Q ss_pred cccccceEEEEEee----------CCCCCCeeeEEEEEECCeEEEEccCCCCC----------CCCCccEEEeCCCeEEe
Q 041556 23 FWSNPERSGWLTKQ----------GDYIKTWRRRWFILKQGKLFWFKDSHNIT----------PGSTPRGVIPVGTCLTV 82 (143)
Q Consensus 23 ~~~~~~~~G~L~k~----------~~~~~~w~~r~~vL~~~~l~~y~~~~~~~----------~~~~~~~~i~L~~~~~~ 82 (143)
.+.+.-++|||+.+ |.....|+..|-+|.++.++.|++..+-. .....-..+.+.+|. +
T Consensus 919 ~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscl-t 997 (1973)
T KOG4407|consen 919 LFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCL-T 997 (1973)
T ss_pred hhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccch-h
Confidence 45678899999974 23456899999999999999999877400 001122245566652 2
Q ss_pred ecCcccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 83 RGAEDLLNKPFAFELSTGE-YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 83 ~~~~~~~~~~~~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+......++.+.|++++.. ..+.|++++.++|-.|+...++...
T Consensus 998 dI~ysetkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St~ 1042 (1973)
T KOG4407|consen 998 DIQYSETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSSTT 1042 (1973)
T ss_pred hhhhhhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhccc
Confidence 2222234778999998876 6789999999999999999865544
No 88
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=95.60 E-value=0.013 Score=46.23 Aligned_cols=85 Identities=14% Similarity=0.158 Sum_probs=65.4
Q ss_pred CCCeeeEEEEEE---CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-ccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 041556 40 IKTWRRRWFILK---QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-DLLNKPFAFELSTGEYTMYFVADTEKEKE 115 (143)
Q Consensus 40 ~~~w~~r~~vL~---~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-~~~~~~~~f~i~~~~~~~~~~a~s~~e~~ 115 (143)
...|...|++.- +-.++.|..++ +......|+|.+|.+..+.. ......|+|.++.....++|.++|++-.+
T Consensus 510 ~~~g~~a~~~vP~~d~~~~~~Yg~~q----Dv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq 585 (623)
T KOG4424|consen 510 GKTGILAWSVVPKSDPLVDYSYGSPQ----DVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQ 585 (623)
T ss_pred CccceeeeeeccCCCCccccccCCcc----ccccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHH
Confidence 457999999884 45888899988 78889999999984432211 11234677777777779999999999999
Q ss_pred HHHHHHHHHHHhh
Q 041556 116 EWINSIGRAIVQH 128 (143)
Q Consensus 116 ~Wi~al~~~~~~~ 128 (143)
.|+..|..|+..-
T Consensus 586 ~wl~~l~~A~~~d 598 (623)
T KOG4424|consen 586 RWLEVLLLAVSGD 598 (623)
T ss_pred HHHHHHHhhhccc
Confidence 9999999887653
No 89
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=95.42 E-value=0.04 Score=43.94 Aligned_cols=81 Identities=17% Similarity=0.343 Sum_probs=49.2
Q ss_pred CeeeEEEEEECCeEEEEccCCCCC---CCCCccEEEeCCCeEE--eecC--cccCCCCceEEEEeC------CeEEEEEc
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNIT---PGSTPRGVIPVGTCLT--VRGA--EDLLNKPFAFELSTG------EYTMYFVA 108 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~---~~~~~~~~i~L~~~~~--~~~~--~~~~~~~~~f~i~~~------~~~~~~~a 108 (143)
..+..|++|.+..|.+-+.+..-. .+-.+...+.+..|.. .... ......+|.|.+.-- .-.+.|+|
T Consensus 498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a 577 (695)
T KOG3523|consen 498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSA 577 (695)
T ss_pred ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecC
Confidence 467899999999998887765200 0111222333333211 0000 011245688988632 23588999
Q ss_pred CCHHHHHHHHHHHH
Q 041556 109 DTEKEKEEWINSIG 122 (143)
Q Consensus 109 ~s~~e~~~Wi~al~ 122 (143)
+|+.|++.||.||.
T Consensus 578 ~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 578 ESQSDRQRWISALR 591 (695)
T ss_pred CchHHHHHHHHhcC
Confidence 99999999999995
No 90
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=95.22 E-value=5.9e-05 Score=56.54 Aligned_cols=81 Identities=21% Similarity=0.554 Sum_probs=64.1
Q ss_pred CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHH
Q 041556 41 KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWINS 120 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~a 120 (143)
..|++.|||+.+..+.||...... ......+.++|..|+.+.... ..+.+.|+|-+.+..|.|.+.+..-...|+.|
T Consensus 33 ~~~~k~~~~~~~~~~~~~~d~~A~-~~~~L~~~~~LR~C~~v~e~a--~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A 109 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKYYRDSTAE-EADELDGEIDLRSCTDVTEYA--VQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEA 109 (593)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHH-hcccCCccccHHHHHHHHHHH--HHhccceeecccchhhhhHHHHHHHHHHHHHH
Confidence 369999999999999999876521 123356788999886543322 25789999999999999999999999999999
Q ss_pred HHHH
Q 041556 121 IGRA 124 (143)
Q Consensus 121 l~~~ 124 (143)
++..
T Consensus 110 ~~kT 113 (593)
T KOG4807|consen 110 LRKT 113 (593)
T ss_pred HHhc
Confidence 9854
No 91
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=95.05 E-value=0.0038 Score=49.00 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCCeeeEEEEEE----CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC---CeEEEEEcCCHH
Q 041556 40 IKTWRRRWFILK----QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG---EYTMYFVADTEK 112 (143)
Q Consensus 40 ~~~w~~r~~vL~----~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~---~~~~~~~a~s~~ 112 (143)
.+..++.||... ...+.+|++. ..|...|++.||.+.+..+....+-+.|-|... ...+++.|+++.
T Consensus 372 ~Kg~kr~f~t~~dl~~~~~~s~~~s~------~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~ 445 (664)
T KOG3727|consen 372 LKGYKRYFFTFRDLHLSLYKSSEDSR------GAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQ 445 (664)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHhhhc------CCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHH
Confidence 344555555444 4445555553 457778888888666555543333334444332 456899999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 041556 113 EKEEWINSIGRAIVQH 128 (143)
Q Consensus 113 e~~~Wi~al~~~~~~~ 128 (143)
+...|++|.+-|....
T Consensus 446 QYA~WMAaCrLASKGk 461 (664)
T KOG3727|consen 446 QYARWMAACRLASKGK 461 (664)
T ss_pred HHHHHHHHhhHhhcCC
Confidence 9999999998776554
No 92
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=94.26 E-value=0.024 Score=45.87 Aligned_cols=93 Identities=5% Similarity=-0.189 Sum_probs=66.9
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
+.+-|+|.++...++.|+.+||++.++.+.+|+++- +....+.+.-.+| .+.... ..-.-++.....++++
T Consensus 259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~----d~~s~~~~~~~~~-s~~fql----i~~t~~~~~~~~s~~l 329 (936)
T KOG0248|consen 259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKI----DIRSVTKLEQQGA-AYAFQL----ITSTDKMNFMTESERT 329 (936)
T ss_pred hHHHHHHHhHheeeccceEEEEEcCCCccccccCcc----cccccceeeccch-hHHhhh----hhhceeEEEeccChhh
Confidence 356688888888889999999999999999999987 4444444433344 222222 2344555556677888
Q ss_pred EcCCHHHHHHHHHHHHHHHHhh
Q 041556 107 VADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
-++...-++.||.+++......
T Consensus 330 t~dw~~iL~~~iKv~~~~~~a~ 351 (936)
T KOG0248|consen 330 THDWVTILSAAIKATTLREMAS 351 (936)
T ss_pred hhhhHHHHHHHHHHHhccchhh
Confidence 8999999999999998765443
No 93
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=93.97 E-value=0.041 Score=45.43 Aligned_cols=99 Identities=25% Similarity=0.373 Sum_probs=66.0
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
.+..|.|.|... ++-++|.|+|....|.|-...-+........+-+++. ..++.++....-+|+|.|....+..+.
T Consensus 750 ~ir~g~llK~sk--kgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~--l~~en~en~~s~p~~~ti~~~qk~i~v 825 (1036)
T KOG3531|consen 750 FIRSGCLLKLSK--KGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT--LTMENSENEWSVPHCFTISGAQKQIYV 825 (1036)
T ss_pred hhhcCCchhhcc--ccchhhhhhhhhhhheeccCCCChhheeEeccCCceE--eeeecccccccCCceEEEeccceEEEE
Confidence 456677766543 3567788888777666533322111122233344444 234455555577999999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhhc
Q 041556 107 VADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+|.+..+.+.|..-++.++....
T Consensus 826 sast~~~sk~~~~~r~~~i~~~~ 848 (1036)
T KOG3531|consen 826 SASTRRESKKWEFDRRKAIDLAP 848 (1036)
T ss_pred eccchhhhhhhhhccchhhhhcc
Confidence 99999999999998888875543
No 94
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=93.66 E-value=1.3 Score=29.11 Aligned_cols=87 Identities=15% Similarity=0.242 Sum_probs=53.2
Q ss_pred CeeeEEEEEECCeEEEEccCCCCC-C-----------CCC---ccEEEeCCCeEEeecCcccCCCCceEEEEe-------
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNIT-P-----------GST---PRGVIPVGTCLTVRGAEDLLNKPFAFELST------- 99 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~-~-----------~~~---~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~------- 99 (143)
.-.---||++.-.+..|+....-. + +.+ -+.+|++....+-..........+.+.|+.
T Consensus 48 e~e~~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe~eg 127 (160)
T cd01255 48 ELELMCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAADMESNFLWELIHLKSELEG 127 (160)
T ss_pred CceEEEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcCcccceEEEEEeecccccC
Confidence 334456788888888887654210 0 001 112455554322222222234456777763
Q ss_pred -CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 -GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 -~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
++++|.|+|.+.+....-+..|++.+...
T Consensus 128 RpE~vfqLCcS~~E~k~~flK~Irsilre~ 157 (160)
T cd01255 128 RPEKVFVLCCSTAESRNAFLKTIRSILRES 157 (160)
T ss_pred CCcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999887654
No 95
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=93.42 E-value=0.33 Score=30.40 Aligned_cols=38 Identities=24% Similarity=0.421 Sum_probs=33.7
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 91 KPFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 91 ~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
..+.|-|.|..+...|.|+|+.+.+.|+.+|+..+...
T Consensus 69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~~ 106 (110)
T PF08458_consen 69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQV 106 (110)
T ss_pred eEEEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999877654
No 96
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=93.13 E-value=0.24 Score=41.27 Aligned_cols=62 Identities=27% Similarity=0.426 Sum_probs=46.2
Q ss_pred CCCccEEEeCCCeEEeecCcccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 67 GSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG---EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 67 ~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~---~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+....++.++..+.++..+.....+.+.|.|... ...+.|.|++++++.+|+.+|+.+....
T Consensus 849 Gtl~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a 913 (1267)
T KOG1264|consen 849 GTLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKA 913 (1267)
T ss_pred chhhhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHh
Confidence 3445567777777667666665567788888643 4568899999999999999999875543
No 97
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=92.11 E-value=0.0024 Score=56.11 Aligned_cols=98 Identities=18% Similarity=0.335 Sum_probs=67.6
Q ss_pred ceEEEEEeeC--------CCCCCeeeEEEEEECCeEEEEccCCCCCCC--CCccE--EEeCCCeEEeecCcccCCCCceE
Q 041556 28 ERSGWLTKQG--------DYIKTWRRRWFILKQGKLFWFKDSHNITPG--STPRG--VIPVGTCLTVRGAEDLLNKPFAF 95 (143)
Q Consensus 28 ~~~G~L~k~~--------~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~--~~~~~--~i~L~~~~~~~~~~~~~~~~~~f 95 (143)
.++|+|+.+- ...+.|...||++..+.+.+|++.+..... ....+ .+.+..+ .+....++.++++.|
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a-~i~~a~dy~kkk~v~ 2378 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMA-AIEVASDYHKKKHVF 2378 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchh-HHHHHHHHHHHhHhh
Confidence 5788886531 145689999999999999999988731000 01111 2223332 233344556788999
Q ss_pred EEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 96 ELSTG-EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 96 ~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+..+ +..|.|+|.++++|..|+.++....+
T Consensus 2379 ~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2379 LLQLPPGAEHLLQAKDEEEMESWLRALAVKRA 2410 (2473)
T ss_pred hhcCCchHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99755 67789999999999999999987775
No 98
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=91.49 E-value=0.18 Score=39.03 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=58.9
Q ss_pred cccceEEEEEeeCCC--CCCeeeEEEEEECC------eEEEEccCCC---CCCCCCccEEEeCCCeEEeecCcccCCCCc
Q 041556 25 SNPERSGWLTKQGDY--IKTWRRRWFILKQG------KLFWFKDSHN---ITPGSTPRGVIPVGTCLTVRGAEDLLNKPF 93 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~--~~~w~~r~~vL~~~------~l~~y~~~~~---~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~ 93 (143)
+...+.|++...... .+.|.++|++|..+ .+..|..++. .......+.++.|..+..++........+-
T Consensus 6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~ 85 (429)
T KOG4047|consen 6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG 85 (429)
T ss_pred CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Confidence 556788888876443 35899999999754 2233332221 111112235777888777776654333332
Q ss_pred eEEEE--eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 94 AFELS--TGEYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 94 ~f~i~--~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.+..+ +... +|-+.+.-+...|+++|..-...
T Consensus 86 i~~~f~~~a~e--~~~~~q~l~~~~w~~~i~~~~~~ 119 (429)
T KOG4047|consen 86 ITAFFCDRAEE--LFNMLQDLMQANWINAIEEPAIP 119 (429)
T ss_pred ceEEEecchHH--HHHHHHHHHhhhhhhhhhhcccc
Confidence 22222 2222 66677777888899999765443
No 99
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=91.12 E-value=0.17 Score=38.48 Aligned_cols=99 Identities=23% Similarity=0.405 Sum_probs=66.6
Q ss_pred ccceEEEEEee--CCCCCCeeeEEEEEECCeEEEEccCCC-CCCCCCccEEEeCCCeEEeecCcccCC----CCceEEEE
Q 041556 26 NPERSGWLTKQ--GDYIKTWRRRWFILKQGKLFWFKDSHN-ITPGSTPRGVIPVGTCLTVRGAEDLLN----KPFAFELS 98 (143)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l~~y~~~~~-~~~~~~~~~~i~L~~~~~~~~~~~~~~----~~~~f~i~ 98 (143)
++..-|||.++ +++...|+..+..|+...|.+|.+-.. ...=..|..+.+|-....+........ -...|.++
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 45567999886 345568999999999999999987542 111234566677655333433332211 12467776
Q ss_pred eCC----eEEEEEcCCHHHHHHHHHHHHHH
Q 041556 99 TGE----YTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 99 ~~~----~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+.. .++.|..++-.|+..|..+|-.-
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslVqG 400 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLVQG 400 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHHHH
Confidence 653 56899999999999999988543
No 100
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=90.77 E-value=0.45 Score=37.42 Aligned_cols=80 Identities=21% Similarity=0.374 Sum_probs=55.7
Q ss_pred CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHH
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YTMYFVADTEKEKEEWINS 120 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~~~~~a~s~~e~~~Wi~a 120 (143)
.-+.||++|....|.++.-... ....-..|-+++.|. +|...++.....+.|.|.... ......|+.+.+++.|+.+
T Consensus 324 d~~dRy~~LF~~~llflsvs~r-Ms~fIyegKlp~tG~-iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ 401 (661)
T KOG2070|consen 324 DEKDRYLLLFPNVLLFLSVSPR-MSGFIYEGKLPTTGM-IVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEH 401 (661)
T ss_pred chhhheeeeccceeeeeEeccc-cchhhhcccccccee-EEeehhhhhcccccccccccchhheeeccCChHHHHHHHHH
Confidence 3469999999988877765441 112334557888886 455555444667888886552 2355679999999999999
Q ss_pred HHH
Q 041556 121 IGR 123 (143)
Q Consensus 121 l~~ 123 (143)
++.
T Consensus 402 ln~ 404 (661)
T KOG2070|consen 402 LNK 404 (661)
T ss_pred hhh
Confidence 975
No 101
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=89.98 E-value=0.32 Score=38.93 Aligned_cols=35 Identities=29% Similarity=0.536 Sum_probs=30.6
Q ss_pred eEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 94 AFELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 94 ~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+|.|++. +..+.|.|-+.+|++.|+.||+..|...
T Consensus 447 ~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaS 482 (749)
T KOG0705|consen 447 CFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILAS 482 (749)
T ss_pred eEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHH
Confidence 8888765 7889999999999999999999887654
No 102
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=89.64 E-value=1.4 Score=35.53 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=69.8
Q ss_pred cccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc---cC-----CCCce
Q 041556 23 FWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED---LL-----NKPFA 94 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~---~~-----~~~~~ 94 (143)
.+.-|...|-|.......+.=+.||.+|.+..+..-+...+ .-.....+.|......+.+.+ .. -..+.
T Consensus 402 ~~GRpkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG~---sy~lke~i~l~~y~m~d~~~~~kd~kk~~~~~ws~~ 478 (865)
T KOG2996|consen 402 DFGRPKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKGD---SYELKEIIYLNAYKMSDDPIDDKDNKKVSTITWSYG 478 (865)
T ss_pred HhCCCCcCceEEEeehhcCCccceEEeEecceEEEeeccCc---chhHHHHHHHHhhccccCCCCchhhhhccceeeeee
Confidence 34556677888777655566789999999999988887662 223344555554322221111 11 13577
Q ss_pred EEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 95 FELSTG--EYTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 95 f~i~~~--~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
|-|+.. ...+.|++.+++-.+.|+.++..++...++
T Consensus 479 f~lI~tqg~ngl~fy~Kte~~kkkWmeqfema~SNi~P 516 (865)
T KOG2996|consen 479 FYLIHTQGRNGLEFYCKTEDLKKKWMEQFEMAKSNISP 516 (865)
T ss_pred EEEEEEcCCcceEEEEecHHHHHHHHHHHHHHHhcCCc
Confidence 877643 345889999999999999999988776543
No 103
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=85.32 E-value=0.018 Score=47.26 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=60.0
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEc
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVA 108 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a 108 (143)
..|...++..-...|+.+++.+++..-.+|.... .......+.+....+.+... ..-++.|.|.++.+...+++
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa----~g~~~~~~d~t~a~~~eSs~--~n~~~sf~vi~~~rk~r~~a 77 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTA----SGPLFALLDLTSAHVAESST--NNPRPSFCVITPVRKHRLCA 77 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhcc----CCccHHHHhccccccccccc--CCCCCCeeEecccHHhhhhc
Confidence 4455555544445688888888877643433322 11112233444333333332 24578888999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 041556 109 DTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 109 ~s~~e~~~Wi~al~~~~~~~ 128 (143)
++..+|..|+.+++......
T Consensus 78 dn~ke~e~wi~~~kt~q~~e 97 (1099)
T KOG1170|consen 78 DNRKEMEKWINQSKTPQHLE 97 (1099)
T ss_pred cchhHHHHhhccccchhhcc
Confidence 99999999999998776543
No 104
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=84.51 E-value=6.8 Score=23.63 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=48.6
Q ss_pred eeEEEEEE---C--CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHHHH
Q 041556 44 RRRWFILK---Q--GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWI 118 (143)
Q Consensus 44 ~~r~~vL~---~--~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi 118 (143)
+.||.+|. . ..+.+++-+......-......+|.....|+...+. .....|.|.. ++.|+..|.+..|....|
T Consensus 4 K~r~Lclsv~~~~~~~v~l~k~K~~~~g~f~i~ktW~L~eL~~I~~~~~~-~~~~~F~l~~-~k~y~W~a~s~~Ek~~Fi 81 (91)
T PF15277_consen 4 KPRYLCLSVTNSPRIQVRLHKVKQNDNGSFQIGKTWDLDELKAIDGINPD-KDTPEFDLTF-DKPYYWEASSAKEKNTFI 81 (91)
T ss_dssp EEEEEEEEEETTETTEEEEEEEEE-CCS-EEEEEEEEGGG--EEEE-SSS---TTEEEEES-SSEEEEEESSHHHHHHHH
T ss_pred ccEEEEEEEecCCceEEEEEEEEecCCCcEEEeeEEehhhceeeeeecCC-CCCcCEEEEE-CCCcEEEeCCHHHHHHHH
Confidence 45665553 2 236666655432222223447788877666655431 2346888876 449999999999999999
Q ss_pred HHHHHHHH
Q 041556 119 NSIGRAIV 126 (143)
Q Consensus 119 ~al~~~~~ 126 (143)
..|-+...
T Consensus 82 ~~L~k~~~ 89 (91)
T PF15277_consen 82 RSLWKLYQ 89 (91)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99876543
No 105
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=81.69 E-value=2.4 Score=32.58 Aligned_cols=38 Identities=16% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 91 KPFAFELSTGE--YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 91 ~~~~f~i~~~~--~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
...+|.|..++ .++.+.|.+..+++.|..||+.+++..
T Consensus 235 EnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~l 274 (506)
T KOG3551|consen 235 ENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNTL 274 (506)
T ss_pred ccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhhH
Confidence 35688888774 467899999999999999999887654
No 106
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=75.07 E-value=0.71 Score=34.39 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=21.5
Q ss_pred ccccceEEEEEeeCC-----CCCCeeeEEEEEEC
Q 041556 24 WSNPERSGWLTKQGD-----YIKTWRRRWFILKQ 52 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-----~~~~w~~r~~vL~~ 52 (143)
....+++|+|.|+.. +.+.||+|||.|++
T Consensus 280 ~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 280 EPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred CchhhHHHHHHhhccCCCccccccchhheeecCC
Confidence 345689999999742 23579999998863
No 107
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=73.20 E-value=6.7 Score=33.30 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=32.8
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSH 62 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~ 62 (143)
.+.+++|.|+.....-+.|..+||||.+..|+|.....
T Consensus 473 ~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~ 510 (1267)
T KOG1264|consen 473 KNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIE 510 (1267)
T ss_pred hhhhhcceEEEecCCCCceeeeEEEEecceeEeehhcc
Confidence 34579999999998888999999999999999977443
No 108
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=73.16 E-value=1.4 Score=33.16 Aligned_cols=27 Identities=26% Similarity=0.604 Sum_probs=19.5
Q ss_pred cccceEEEEEeeCC----C-CC-CeeeEEEEEE
Q 041556 25 SNPERSGWLTKQGD----Y-IK-TWRRRWFILK 51 (143)
Q Consensus 25 ~~~~~~G~L~k~~~----~-~~-~w~~r~~vL~ 51 (143)
...+++|+|.|+.. + .+ .||+|||.|+
T Consensus 301 ~~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 301 SVTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred CchhhhhHhhhccccCCCCcccccccceeeecC
Confidence 45678999998742 1 22 5999999874
No 109
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=73.01 E-value=8.9 Score=33.61 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=42.1
Q ss_pred ccEEEeCCCeEEeecCcccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 70 PRGVIPVGTCLTVRGAEDLLNKPFAFELSTG---EYTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 70 ~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~---~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
...+|.|....+.+.+. ..+-.|.|... ...|.+.|.|.+|.+.|+..|+.+++.....
T Consensus 666 ~spVisL~~livRevAt---d~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 666 KSPVISLQKLIVREVAT---DEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCCceehHHHHHHHHhc---cccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 45677777652222232 35667777654 4678899999999999999999998865443
No 110
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=71.65 E-value=18 Score=29.30 Aligned_cols=83 Identities=22% Similarity=0.354 Sum_probs=55.1
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEEC-CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEE
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQ-GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFV 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~-~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 107 (143)
+.|.|.++.+. .-++|.+.|.. ..++|+...+ ....+-|++..+..++. ...+.|.|.++.++|+|.
T Consensus 453 k~~~l~k~~~l--f~rkr~lllTn~~rll~~~~~~-----~~lk~eip~~~~~~~e~-----~n~~~~~i~TP~k~~~l~ 520 (604)
T KOG0592|consen 453 KEGALEKRQGL--FARKRMLLLTNGPRLLYVDPQN-----LVLKGEIPWSPDLRVEL-----KNSSTFFIHTPNKVYYLE 520 (604)
T ss_pred hHHHHHhhhhh--hhceeEEEecCCCeEEEEeccc-----ceeccccccCcccceee-----ccCcceEEECCccceecc
Confidence 44555554332 23668888875 4666666433 55667777766434332 456889999999999886
Q ss_pred cCCHHHHHHHHHHHHHH
Q 041556 108 ADTEKEKEEWINSIGRA 124 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~ 124 (143)
- -+.....|..||..+
T Consensus 521 d-~~~~as~w~~ai~~~ 536 (604)
T KOG0592|consen 521 D-PEQRASVWCKAIETV 536 (604)
T ss_pred C-cccchhHHHHhhhhh
Confidence 4 445678899999988
No 111
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=71.16 E-value=1.4 Score=32.90 Aligned_cols=28 Identities=25% Similarity=0.622 Sum_probs=20.6
Q ss_pred cccceEEEEEeeC--C---CCCCeeeEEEEEEC
Q 041556 25 SNPERSGWLTKQG--D---YIKTWRRRWFILKQ 52 (143)
Q Consensus 25 ~~~~~~G~L~k~~--~---~~~~w~~r~~vL~~ 52 (143)
...+++|.|.++. . +.+.||+|||.|++
T Consensus 278 ~~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 278 PILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred cchhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 4567899999853 2 23579999999863
No 112
>KOG3521 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=71.08 E-value=5 Score=33.04 Aligned_cols=99 Identities=11% Similarity=0.018 Sum_probs=62.1
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCC-CCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC---
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHN-ITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG--- 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~-~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~--- 100 (143)
.+.+++|-+..+.+. .+=...||+|.-..|..-+..+. ++..+..+..+.++.. ++... ..++.|-++.-
T Consensus 425 RqLlleGdlrmKegk-~sK~DVhcfLfTDllLVcK~v~k~~drlKVIRpPll~dkl-v~q~~----~dpnsf~lVhLtEF 498 (846)
T KOG3521|consen 425 RQLLLEGDLRMKEGK-GSKADVHCFLFTDLLLVCKKVQKKADRLKVIRPPLLMDKL-VCQYL----RDPNSFLLVHLTEF 498 (846)
T ss_pred hhhhhccceecccCC-CcccceeeeeehhHHHHhHHHhhhcccceeeccchhhcce-eeeec----CCCCceEEEeechh
Confidence 345678888766442 13357888888777766665552 1111122223334442 33332 34677777643
Q ss_pred ---CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 101 ---EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 101 ---~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
...|.+.|...++...|.++|++|.+...
T Consensus 499 h~a~~ayt~hcs~p~d~~~W~D~l~~Aq~~~Q 530 (846)
T KOG3521|consen 499 HTAQAAYTMHCSGPEDTLRWTDMLKMAQDELQ 530 (846)
T ss_pred hhhhhhheeecCChhhHHHHHHHHHHHHHHHH
Confidence 34688999999999999999999987654
No 113
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=63.16 E-value=2 Score=32.12 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=20.3
Q ss_pred cccceEEEEEeeCC-----CCCCeeeEEEEEE
Q 041556 25 SNPERSGWLTKQGD-----YIKTWRRRWFILK 51 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-----~~~~w~~r~~vL~ 51 (143)
..++++|++.++.. +.+.+|+|||.|+
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 45779999988642 2357999999874
No 114
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=59.99 E-value=6.9 Score=20.86 Aligned_cols=20 Identities=20% Similarity=0.654 Sum_probs=17.8
Q ss_pred CCeeeEEEEEECCeEEEEcc
Q 041556 41 KTWRRRWFILKQGKLFWFKD 60 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~y~~ 60 (143)
+.|.+.|..+.+..|.+|+-
T Consensus 28 r~wEKKWVtv~dtslriyKW 47 (52)
T PF04714_consen 28 RKWEKKWVTVGDTSLRIYKW 47 (52)
T ss_pred HHHhhceEEeccceEEEEEE
Confidence 47999999999999999874
No 115
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=53.33 E-value=72 Score=21.98 Aligned_cols=84 Identities=14% Similarity=0.128 Sum_probs=55.0
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEc-----cCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEE-e
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFK-----DSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS-T 99 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~-----~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~-~ 99 (143)
.++.+..+.|... ...-+.|.+++++..+|... ... .......|+|.....+..+. .....|.|. .
T Consensus 49 ~vlFs~~v~K~nr-~~K~~~R~livT~~~iY~l~~~~~~~~~----~~~~kr~i~l~~I~~IsvS~---~~D~~~vihv~ 120 (199)
T PF06017_consen 49 KVLFSDRVQKYNR-RNKPQPRILIVTDKAIYLLDQRKVKDPK----KYKLKRRIPLSDITGISVSP---LSDNFFVIHVP 120 (199)
T ss_pred ceEEEEEEEEecC-CCCccceEEEEeCCeEEEEEEeecCCce----eeEEEeccCcccccEEEEcc---CCCCEEEEEEC
Confidence 5667777777766 34568999999999999986 333 34456678887765554433 223444444 4
Q ss_pred CCeEEEEEcCCHHHHHHH
Q 041556 100 GEYTMYFVADTEKEKEEW 117 (143)
Q Consensus 100 ~~~~~~~~a~s~~e~~~W 117 (143)
.+.-+.|.+....|+-.=
T Consensus 121 ~~~D~il~~~~k~Elv~~ 138 (199)
T PF06017_consen 121 GEGDLILESDFKTELVTI 138 (199)
T ss_pred CCCCEEEEeCcHHHHHHH
Confidence 566688888877555433
No 116
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=42.90 E-value=12 Score=24.84 Aligned_cols=19 Identities=21% Similarity=0.774 Sum_probs=17.8
Q ss_pred CCeeeEEEEEECCeEEEEc
Q 041556 41 KTWRRRWFILKQGKLFWFK 59 (143)
Q Consensus 41 ~~w~~r~~vL~~~~l~~y~ 59 (143)
+.|.++|..+.+..|.+|+
T Consensus 29 RrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 29 RRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHhhheEeecccceEEEE
Confidence 4799999999999999998
No 117
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]
Probab=40.95 E-value=16 Score=31.02 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=56.3
Q ss_pred eEEEEEeeCCCC--CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEe-----e---cCcccCCCCceEEEE
Q 041556 29 RSGWLTKQGDYI--KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTV-----R---GAEDLLNKPFAFELS 98 (143)
Q Consensus 29 ~~G~L~k~~~~~--~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~-----~---~~~~~~~~~~~f~i~ 98 (143)
+.||+...+... ..|---|..+.-....+|.... +..-..|.-.|.+....-+ + ..++...--+.+.|.
T Consensus 814 mnGwlRVyRdd~~~stwl~~wammdl~~~~fy~~~g-adple~p~f~idlnkeqw~Lrtgqe~~~~v~dimrvfnvliIK 892 (1265)
T KOG0976|consen 814 MNGWLRVYRDDAEASTWLLGWAMMDLEGDDFYDMNG-ADPLEDPVFLIDLNKEQWALRTGQESLTHVPDIMRVFNVLIIK 892 (1265)
T ss_pred cccceeeeccccchhHHHHHHHHhhhcccchhhccC-CccccCceEEeecchhHHHHHhccccccCCcchhhhheeeeec
Confidence 567776654322 3566666666555556666544 1122344556665532111 1 111111112444455
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 99 TGEYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 99 ~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
...+.+++.+++...+.+|...|+.+...
T Consensus 893 ~~~r~l~I~ap~~~saerwA~CLq~aqk~ 921 (1265)
T KOG0976|consen 893 DLERLLMIAAPSPKSAERWALCLQDAQKV 921 (1265)
T ss_pred chhhhheeecCCCccHHHHHHHHHHHHHH
Confidence 66889999999999999999999888554
No 118
>PF14470 bPH_3: Bacterial PH domain
Probab=40.83 E-value=75 Score=18.53 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=54.0
Q ss_pred CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSI 121 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al 121 (143)
....-++++++..+.++...-- .......+++.....++.... -....+.+.+.+..+.+..-+..+++.=+..|
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~~---~~~~~~~i~y~~I~~v~~~~g--~~~~~i~i~~~~~~~~i~~i~k~~~~~~~~~i 94 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGMF---GGKKFESIPYDDITSVSFKKG--ILGGKITIETNGEKIKIDNIQKGDVKEFYEYI 94 (96)
T ss_pred cCceeEEEEeCCEEEEEEcccC---CCceEEEEEhhheEEEEEEcc--ccccEEEEEECCEEEEEEEcCHHHHHHHHHHH
Confidence 4667788999999999887531 234567888888766654432 23466888888888888877888887777766
Q ss_pred H
Q 041556 122 G 122 (143)
Q Consensus 122 ~ 122 (143)
+
T Consensus 95 ~ 95 (96)
T PF14470_consen 95 K 95 (96)
T ss_pred h
Confidence 4
No 119
>KOG3518 consensus Putative guanine nucleotide exchange factor [General function prediction only]
Probab=33.39 E-value=47 Score=25.38 Aligned_cols=39 Identities=23% Similarity=0.530 Sum_probs=31.5
Q ss_pred CCCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 90 NKPFAFELST---GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 90 ~~~~~f~i~~---~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
..|..|++.. +.-.+.|.|.+.++...|+..|++.+...
T Consensus 394 eeplsfqv~~fdnpkaq~~fma~sme~kr~wm~elkrlildh 435 (521)
T KOG3518|consen 394 EEPLSFQVFHFDNPKAQHTFMAKSMEDKRLWMLELKRLILDH 435 (521)
T ss_pred CCCceeEEEecCCcchhhhhhhhhhHHHHHHHHHHHHHHHhh
Confidence 4578888864 34568899999999999999999887654
No 120
>KOG1729 consensus FYVE finger containing protein [General function prediction only]
Probab=32.77 E-value=19 Score=26.65 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=50.0
Q ss_pred CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 041556 42 TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSI 121 (143)
Q Consensus 42 ~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al 121 (143)
.-+.|+|+|.+..+.|-...... ..-.....+++.+. ..+...+...-+++.+|.+....+.+.+.++.++.+|+.+|
T Consensus 59 ~~q~r~~~l~~D~~~~~~~~~~~-~~~~~~~~~~le~~-~~~~~~~~~~~~~~~~~~S~~ks~~~~~as~~ek~e~~~~i 136 (288)
T KOG1729|consen 59 KLQSRSFFLFNDILVYGNIVSDN-KLLNKNHIIPLEGV-SQESRSDNERVRNGWQILSALKSFTVLAASQTEKNEWQNHI 136 (288)
T ss_pred ccccccccccccchhhcccccCH-HHHhHHhcccccch-hhhhhccccccccchhhhcccchhhhhcchhhhhHHHHHHH
Confidence 36778888887766553222200 00011224445442 12222221233557788888888888899999999999888
Q ss_pred HHHHHhh
Q 041556 122 GRAIVQH 128 (143)
Q Consensus 122 ~~~~~~~ 128 (143)
.++....
T Consensus 137 ~~~~~~~ 143 (288)
T KOG1729|consen 137 TECVEDL 143 (288)
T ss_pred HHHHHHH
Confidence 8776554
No 121
>cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=32.46 E-value=1.4e+02 Score=19.18 Aligned_cols=55 Identities=20% Similarity=0.316 Sum_probs=31.1
Q ss_pred EEEeCCCeEEeecCcccCCCCceEE--EEeC----CeEEEEE-cCCHHHHHHHHHHHHHHHH
Q 041556 72 GVIPVGTCLTVRGAEDLLNKPFAFE--LSTG----EYTMYFV-ADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 72 ~~i~L~~~~~~~~~~~~~~~~~~f~--i~~~----~~~~~~~-a~s~~e~~~Wi~al~~~~~ 126 (143)
..++|.....|....+....++.|- +..+ +..|.|+ +.-+.+...|+..|.+.++
T Consensus 67 ~lmpLs~IkrVvdI~DtE~c~~aF~L~~R~p~d~~~~L~sF~l~~Ee~~K~~~Lk~Lcr~~A 128 (129)
T cd01229 67 HLMPLSQIKKVLDIRDTEDCHNAFALLVRPPTEQANVLLSFQMTSEELPKEVWLKMLCRHVA 128 (129)
T ss_pred EEeEhHHeEEEEeeeccccccceeEEEEeCCccchheEEEEEecCCcchHHHHHHHHHHHhc
Confidence 4677776533332222223344444 4444 3456565 4445577889999988765
No 122
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=29.76 E-value=46 Score=28.61 Aligned_cols=92 Identities=10% Similarity=0.119 Sum_probs=56.4
Q ss_pred ceEEEEEeeCC--CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEE
Q 041556 28 ERSGWLTKQGD--YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMY 105 (143)
Q Consensus 28 ~~~G~L~k~~~--~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~ 105 (143)
-++|++.++.+ ...+|.++|.+++...+.|..... -......+..++. .+ ........+..|.+....+.+.
T Consensus 176 h~~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~----~~~~~~Il~~d~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 249 (887)
T KOG1329|consen 176 HKAGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR----IGGWFPILDNDGK-PH-QKGSNESLRLGFTPMEKDRNLK 249 (887)
T ss_pred ccccEEEEeecCCccccceeEEEEeccchhhhhcccc----ccceeeeeccCCc-cc-cCCcccceEEeeEeechhhhhh
Confidence 35788887632 334699999999999888877543 1112223333331 11 1111123345666666778888
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q 041556 106 FVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al~~~~ 125 (143)
+.+.+..+.+.|..++-.+.
T Consensus 250 ~~~~s~~~~r~~~~~~~~~~ 269 (887)
T KOG1329|consen 250 LGCKSGRSFRGWPGTIFPQR 269 (887)
T ss_pred heeccccccCCccceeeehh
Confidence 88888888888888775543
No 123
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=29.73 E-value=8.5 Score=31.28 Aligned_cols=38 Identities=24% Similarity=0.524 Sum_probs=29.0
Q ss_pred ccceEEEEEeeCC-CC-CCeeeEEEEEE-CCeEEEEccCCC
Q 041556 26 NPERSGWLTKQGD-YI-KTWRRRWFILK-QGKLFWFKDSHN 63 (143)
Q Consensus 26 ~~~~~G~L~k~~~-~~-~~w~~r~~vL~-~~~l~~y~~~~~ 63 (143)
-|+++|.|.|+.+ .. +.|++.|..|. ++.|.||-+-.+
T Consensus 301 IPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~d 341 (749)
T KOG0705|consen 301 IPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLGD 341 (749)
T ss_pred cchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHHH
Confidence 4889999999865 23 79999999886 567777765443
No 124
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=28.07 E-value=1.1e+02 Score=24.52 Aligned_cols=27 Identities=7% Similarity=0.213 Sum_probs=23.3
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|.|.+.+++..+.|+.+|+..++..
T Consensus 82 ~~~~~~~~~~~~~~~w~~~~~~~~~~~ 108 (481)
T PLN02958 82 KDFVFEPLSDESRRLWCQKLRDYLDSL 108 (481)
T ss_pred eeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 468899999999999999999987643
No 125
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=27.47 E-value=1.1e+02 Score=21.99 Aligned_cols=26 Identities=27% Similarity=0.321 Sum_probs=22.4
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.+.|++|++.+++-.|+.-|+.++..
T Consensus 249 g~~~iaapsREdave~l~iik~a~~~ 274 (290)
T COG4026 249 GTVYIAAPSREDAVEELEIIKEAIEE 274 (290)
T ss_pred eeeeeecCchHHHHHHHHHHHHHHHH
Confidence 35689999999999999999988654
No 126
>PF12213 Dpoe2NT: DNA polymerases epsilon N terminal; InterPro: IPR024639 This domain is found in the N-terminal of DNA polymerase epsilon subunit B proteins. It contains a single completely conserved phenylalanine residue that may be functionally important. It forms a primarily alpha helical structure in which four helices are arranged in two hairpins with connecting loops containing beta strands which form a short parallel sheet. DNA polymerase epsilon is required in DNA replication for synthesis of the leading strand. The N-terminal domain has close structural relation to AAA+ protein C-terminal domains [].; PDB: 2V6Z_M.
Probab=26.53 E-value=46 Score=19.21 Aligned_cols=25 Identities=28% Similarity=0.547 Sum_probs=17.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCC
Q 041556 109 DTEKEKEEWINSIGRAIVQHSRSVT 133 (143)
Q Consensus 109 ~s~~e~~~Wi~al~~~~~~~~~~~~ 133 (143)
.+..+...|+..|..++.......+
T Consensus 35 ~~~~e~e~~l~~Ii~~v~kq~Lss~ 59 (73)
T PF12213_consen 35 LSEEEREDWLDKIIDAVQKQPLSSS 59 (73)
T ss_dssp S-TTTHHHHHHHHHHHHTTS--SSS
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3567889999999999887665443
No 127
>PF08394 Arc_trans_TRASH: Archaeal TRASH domain; InterPro: IPR013603 This region is found in the C terminus of a number of archaeal transcriptional regulators. It is thought to function as a metal-sensing regulatory module [].
Probab=23.76 E-value=1.1e+02 Score=15.16 Aligned_cols=19 Identities=21% Similarity=0.315 Sum_probs=13.6
Q ss_pred eEEEEeCCeEEEEEcCCHH
Q 041556 94 AFELSTGEYTMYFVADTEK 112 (143)
Q Consensus 94 ~f~i~~~~~~~~~~a~s~~ 112 (143)
.+.+...++.|||.+++-.
T Consensus 12 P~~~k~~~~~y~fCC~tC~ 30 (37)
T PF08394_consen 12 PIVVKIGNKVYYFCCPTCL 30 (37)
T ss_pred EEEEEECCeEEEEECHHHH
Confidence 3344447899999998755
No 128
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=23.53 E-value=1.6e+02 Score=19.11 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=20.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.|.|++.|++.+.+=+.+|.++..
T Consensus 103 CyVFqc~Se~la~eI~lti~QAF~ 126 (129)
T cd01269 103 CYVFQCADESLVDEVMLTLKQAFS 126 (129)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHh
Confidence 477999999999999999887754
No 129
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=23.21 E-value=1.7e+02 Score=17.28 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=18.5
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHH
Q 041556 91 KPFAFELSTGEYTMYFVADTEKEK 114 (143)
Q Consensus 91 ~~~~f~i~~~~~~~~~~a~s~~e~ 114 (143)
.+..+.|.+.++.|++.+++.++.
T Consensus 69 ~~~~i~I~t~~~~y~isp~~~~~f 92 (100)
T PF10882_consen 69 NKNVILIKTKDKTYVISPEDPEEF 92 (100)
T ss_pred CCCEEEEEECCceEEEcCCCHHHH
Confidence 467888888888899977776554
No 130
>cd05395 RasGAP_RASA4 Ras GTPase activating-like 4 protein (RASAL4), also known as Ca2+ -promoted Ras inactivator (CAPRI), is a member of the GAP1 family. Members of the GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL4, like RASAL, is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to a receptor-mediated elevation in the concentration of intracellular free Ca2+ ([Ca2+]i). However, unlike RASAL, RASAL4 does not sense oscillations in [Ca2+]i.
Probab=21.36 E-value=22 Score=27.02 Aligned_cols=24 Identities=17% Similarity=0.491 Sum_probs=16.6
Q ss_pred ceEEEEE-eeC--C---CCCCeeeEEEEEE
Q 041556 28 ERSGWLT-KQG--D---YIKTWRRRWFILK 51 (143)
Q Consensus 28 ~~~G~L~-k~~--~---~~~~w~~r~~vL~ 51 (143)
.++|.+. ++. . +.+.||+|||.|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 331 (337)
T cd05395 302 VKEGFLFLHRTKGKGPLMTSPFKKLYFTLT 331 (337)
T ss_pred HHHHHHHHHhccCCCCccccchhhheeeee
Confidence 4677666 432 2 2368999999997
No 131
>PRK11370 YciI-like protein; Reviewed
Probab=20.12 E-value=1.4e+02 Score=17.90 Aligned_cols=20 Identities=10% Similarity=0.248 Sum_probs=16.6
Q ss_pred CeEEEEEcCCHHHHHHHHHH
Q 041556 101 EYTMYFVADTEKEKEEWINS 120 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~a 120 (143)
+..+.+.++|.++++.|+..
T Consensus 58 G~~ii~ea~s~~~a~~~~~~ 77 (99)
T PRK11370 58 GSTVIAEFESLEAAQAWADA 77 (99)
T ss_pred ceEEEEEECCHHHHHHHHHC
Confidence 45677899999999999875
Done!