Query 041556
Match_columns 143
No_of_seqs 119 out of 1068
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:03:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wi1_A Calcium-dependent activ 99.9 1.4E-26 4.8E-31 146.8 12.2 106 25-134 6-118 (126)
2 1v88_A Oxysterol binding prote 99.9 1.8E-25 6.3E-30 144.1 13.7 99 24-129 5-127 (130)
3 1pls_A Pleckstrin homology dom 99.9 9.9E-25 3.4E-29 137.3 16.6 105 25-133 3-108 (113)
4 1x1f_A Signal-transducing adap 99.9 5E-25 1.7E-29 144.9 15.0 100 25-128 16-115 (149)
5 1wgq_A FYVE, rhogef and PH dom 99.9 4.4E-24 1.5E-28 133.5 16.0 98 25-127 6-104 (109)
6 2dn6_A KIAA0640 protein; PH do 99.9 2E-24 7E-29 136.0 14.0 101 25-129 6-106 (115)
7 1v89_A Hypothetical protein KI 99.9 6.1E-24 2.1E-28 134.3 15.5 101 24-128 5-114 (118)
8 1fao_A Dual adaptor of phospho 99.9 6.5E-24 2.2E-28 135.9 14.6 103 24-131 15-117 (126)
9 1fgy_A GRP1; PH domain, signal 99.9 1.1E-23 3.8E-28 134.7 15.3 99 24-128 2-122 (127)
10 2dhk_A TBC1 domain family memb 99.9 4.1E-24 1.4E-28 135.8 13.1 101 24-131 5-109 (119)
11 2coc_A FYVE, rhogef and PH dom 99.9 4.4E-24 1.5E-28 134.1 13.0 99 25-128 6-108 (112)
12 1v5u_A SBF1, SET binding facto 99.9 4.4E-24 1.5E-28 134.9 12.6 100 25-128 6-113 (117)
13 2cod_A Centaurin-delta 1; ARF 99.9 1.5E-23 5.2E-28 132.2 14.9 96 25-129 6-102 (115)
14 1dyn_A Dynamin; signal transdu 99.9 6.2E-24 2.1E-28 133.4 12.3 97 26-126 11-117 (125)
15 1x05_A Pleckstrin; PH domain, 99.9 2.2E-23 7.4E-28 134.0 15.0 106 20-129 11-123 (129)
16 2rsg_A Collagen type IV alpha- 99.9 7.7E-24 2.6E-28 129.2 12.0 92 27-124 1-92 (94)
17 2i5f_A Pleckstrin; PH domain, 99.9 5.3E-23 1.8E-27 128.4 14.3 98 24-125 4-108 (109)
18 2w2x_D 1-phosphatidylinositol- 99.9 1.6E-23 5.4E-28 134.1 11.7 105 24-128 9-121 (124)
19 1eaz_A Tandem PH domain contai 99.9 3E-23 1E-27 132.5 12.9 103 24-130 11-115 (125)
20 2dkp_A Pleckstrin homology dom 99.9 9.7E-23 3.3E-27 130.6 15.3 101 24-128 18-121 (128)
21 1u5d_A SKAP55, SRC kinase-asso 99.9 3.4E-23 1.2E-27 128.8 12.1 99 26-128 2-107 (108)
22 2d9y_A Pleckstrin homology dom 99.9 1.4E-22 4.9E-27 127.9 15.1 101 25-129 9-112 (117)
23 2lul_A Tyrosine-protein kinase 99.9 1.3E-22 4.5E-27 135.6 15.3 109 21-132 9-127 (164)
24 1v5p_A Pleckstrin homology dom 99.9 7.6E-23 2.6E-27 131.2 13.5 103 25-127 13-121 (126)
25 1wg7_A Dedicator of cytokinesi 99.9 6.9E-23 2.4E-27 134.9 13.5 100 24-128 15-126 (150)
26 3cxb_B Pleckstrin homology dom 99.9 1E-22 3.6E-27 128.1 13.3 97 28-128 1-103 (112)
27 1btk_A Bruton'S tyrosine kinas 99.9 2.8E-23 9.7E-28 139.4 11.2 104 26-129 2-135 (169)
28 1u5f_A SRC-associated adaptor 99.9 2E-22 6.7E-27 132.5 15.0 106 21-130 11-123 (148)
29 2d9v_A Pleckstrin homology dom 99.9 1.8E-22 6E-27 130.2 14.4 100 25-128 6-116 (130)
30 2p0d_A RHO GTPase-activating p 99.9 1.9E-22 6.5E-27 129.9 14.3 103 25-128 10-126 (129)
31 1wjm_A Beta-spectrin III; PH d 99.9 4.3E-23 1.5E-27 131.7 11.1 106 24-130 5-121 (123)
32 2da0_A 130-kDa phosphatidylino 99.9 5.5E-22 1.9E-26 125.0 15.9 100 25-133 8-108 (114)
33 3aj4_A Pleckstrin homology dom 99.9 4.9E-23 1.7E-27 129.3 11.0 98 25-126 3-111 (112)
34 3rcp_A Pleckstrin homology dom 99.9 9.1E-23 3.1E-27 126.2 11.9 95 29-129 1-96 (103)
35 1upq_A PEPP1; PH domain, phosp 99.9 3E-22 1E-26 127.5 14.5 100 25-128 9-111 (123)
36 1x1g_A Pleckstrin 2; PH domain 99.9 9.1E-23 3.1E-27 131.0 12.2 104 21-128 12-126 (129)
37 2yry_A Pleckstrin homology dom 99.9 4.7E-22 1.6E-26 126.4 15.2 98 25-126 20-120 (122)
38 2d9x_A Oxysterol binding prote 99.9 7.6E-23 2.6E-27 130.0 10.9 99 25-129 6-107 (120)
39 2cof_A Protein KIAA1914; PH do 99.9 8.3E-23 2.8E-27 127.4 10.6 97 23-126 4-101 (107)
40 4a6h_A Phosphatidylinositol 4, 99.9 4.9E-22 1.7E-26 126.3 14.1 98 27-125 6-117 (120)
41 1unq_A RAC-alpha serine/threon 99.9 1.5E-23 5.3E-28 134.0 6.5 112 25-142 6-124 (125)
42 2y7b_A Actin-binding protein a 99.9 1.4E-22 4.9E-27 130.9 10.6 104 25-129 3-131 (134)
43 1u5e_A SRC-associated adaptor 99.9 6.9E-22 2.3E-26 137.0 14.4 100 24-127 103-209 (211)
44 1btn_A Beta-spectrin; signal t 99.9 7.1E-22 2.4E-26 122.6 10.1 95 29-124 1-106 (106)
45 2j59_M RHO-GTPase activating p 99.9 9.1E-22 3.1E-26 131.8 10.8 98 26-126 2-111 (168)
46 2r09_A Cytohesin-3; autoinhibi 99.9 9.2E-21 3.1E-25 140.1 15.2 100 23-128 209-330 (347)
47 3tfm_A Myosin X; split PH doma 99.9 3.7E-21 1.3E-25 134.8 11.0 96 25-127 56-156 (228)
48 1dro_A Beta-spectrin; cytoskel 99.9 1.3E-21 4.3E-26 124.8 7.6 102 25-127 6-120 (122)
49 3pp2_A RHO GTPase-activating p 99.9 1.8E-20 6.3E-25 119.8 13.0 101 25-126 6-123 (124)
50 3a8p_A T-lymphoma invasion and 99.8 1.4E-20 4.6E-25 134.3 12.6 103 25-128 9-126 (263)
51 2rlo_A Centaurin-gamma 1; spli 99.8 3.3E-20 1.1E-24 119.1 13.2 103 26-128 3-126 (128)
52 2dtc_A RAL guanine nucleotide 99.8 6E-20 2.1E-24 116.9 14.1 103 28-132 2-118 (126)
53 1qqg_A IRS-1, insulin receptor 99.8 1.2E-20 4.2E-25 134.6 9.9 101 24-129 7-115 (264)
54 3lju_X ARF-GAP with dual PH do 99.8 4.3E-20 1.5E-24 138.2 12.9 101 24-128 266-374 (386)
55 2q13_A DCC-interacting protein 99.8 1.4E-19 4.6E-24 135.5 13.3 100 25-131 276-380 (385)
56 4h8s_A DCC-interacting protein 99.8 9.5E-20 3.2E-24 137.3 10.6 98 25-129 299-401 (407)
57 3lju_X ARF-GAP with dual PH do 99.8 2.1E-19 7.3E-24 134.4 10.9 98 24-126 143-246 (386)
58 2fjl_A 1-phosphatidylinositol- 99.8 1.5E-18 5.2E-23 112.6 13.3 100 28-127 2-149 (150)
59 3tca_A Amyloid beta A4 precurs 99.8 9.5E-19 3.2E-23 126.2 9.8 98 25-126 166-276 (291)
60 2rov_A RHO-associated protein 99.8 2E-18 7E-23 109.1 9.4 98 28-126 2-115 (117)
61 2d9w_A Docking protein 2; PH d 99.8 3.2E-17 1.1E-21 102.7 14.1 105 23-128 8-123 (127)
62 2ys3_A UNC-112-related protein 99.8 5.2E-18 1.8E-22 108.2 9.3 99 26-127 8-113 (137)
63 3a8n_A TIAM-1, T-lymphoma inva 99.7 4.9E-17 1.7E-21 116.2 9.4 102 25-127 9-125 (279)
64 4f7h_A Fermitin family homolog 99.7 1.8E-15 6.2E-20 98.9 12.2 101 26-129 46-153 (173)
65 3hk0_A Growth factor receptor- 99.7 4.1E-15 1.4E-19 105.2 13.7 99 26-128 131-242 (256)
66 4bbk_A Kindlin-1, fermitin fam 99.6 8E-15 2.7E-19 94.9 11.9 101 26-129 25-132 (165)
67 4gmv_A RAS-associated and plec 99.6 1.1E-14 3.9E-19 104.1 11.4 103 25-128 156-268 (281)
68 4ejn_A RAC-alpha serine/threon 99.6 6.9E-15 2.4E-19 111.5 9.0 98 26-127 5-109 (446)
69 1w1g_A HPDK1, 3-phosphoinositi 99.5 5.9E-14 2E-18 91.0 10.3 97 25-133 50-146 (151)
70 2d9z_A Protein kinase C, NU ty 99.5 4.6E-13 1.6E-17 84.1 14.0 101 25-129 6-126 (129)
71 2coa_A Protein kinase C, D2 ty 99.5 1.2E-13 4E-18 86.5 11.0 100 24-127 5-120 (125)
72 1v61_A RAC/CDC42 guanine nucle 99.1 2.6E-09 8.8E-14 68.3 11.3 105 23-129 24-129 (132)
73 1v5m_A SH2 and PH domain-conta 98.9 5.9E-08 2E-12 61.1 13.1 100 25-128 16-132 (136)
74 3ml4_A Protein DOK-7; tyrosine 98.9 7.6E-09 2.6E-13 70.9 9.7 99 25-125 7-112 (224)
75 1zc3_B Exocyst complex protein 98.9 6.5E-08 2.2E-12 60.3 13.2 100 27-127 8-108 (113)
76 3qwm_A Iqsec1, IQ motif and SE 98.6 1.8E-06 6.3E-11 55.3 12.8 100 27-128 13-124 (140)
77 3tfm_A Myosin X; split PH doma 98.6 1.5E-07 5.1E-12 65.6 7.1 47 25-75 19-65 (228)
78 3mpx_A FYVE, rhogef and PH dom 98.5 6.9E-07 2.4E-11 67.5 9.7 97 26-128 243-339 (434)
79 2pz1_A RHO guanine nucleotide 98.5 6.9E-06 2.4E-10 62.6 14.1 107 25-131 332-445 (466)
80 2dfk_A Collybistin II; DH doma 98.4 1.1E-05 3.6E-10 60.6 13.2 105 24-128 254-365 (402)
81 1dbh_A Protein (human SOS 1); 98.3 8.4E-06 2.9E-10 60.0 11.6 98 25-127 245-350 (354)
82 2vrw_B P95VAV, VAV1, proto-onc 98.3 1.4E-05 4.7E-10 59.9 12.8 103 25-130 232-339 (406)
83 2lg1_A A-kinase anchor protein 98.3 1E-05 3.5E-10 54.6 10.5 101 25-129 69-175 (185)
84 3zvr_A Dynamin-1; hydrolase, D 98.3 1E-05 3.4E-10 65.2 12.0 97 27-127 540-646 (772)
85 3ky9_A Proto-oncogene VAV; cal 98.3 2E-05 6.7E-10 61.9 12.7 104 25-131 404-512 (587)
86 1kz7_A Guanine nucleotide exch 98.2 5.5E-05 1.9E-09 55.7 13.0 103 24-129 207-328 (353)
87 1mai_A Phospholipase C delta-1 98.2 3E-05 1E-09 49.3 9.8 98 29-129 14-124 (131)
88 3t06_A PDZ-rhogef, RHO guanine 98.1 4.5E-05 1.5E-09 57.3 12.0 102 25-131 293-413 (418)
89 1xcg_A PDZ-rhogef, RHO guanine 98.1 9.1E-05 3.1E-09 54.7 13.3 98 25-127 251-367 (368)
90 1nty_A Triple functional domai 98.1 7.7E-05 2.6E-09 53.9 12.7 101 25-128 201-310 (311)
91 3p6a_A RHO guanine nucleotide 98.0 9.8E-05 3.3E-09 54.7 12.0 101 25-129 257-374 (377)
92 1txd_A RHO guanine nucleotide 98.0 0.00017 5.9E-09 53.6 12.1 101 25-129 255-372 (385)
93 3odw_A RHO guanine nucleotide 98.0 0.00015 5.1E-09 56.4 11.9 103 25-131 410-529 (536)
94 3jzy_A Intersectin 2; C2 domai 98.0 1.1E-06 3.8E-11 67.5 0.0 97 27-128 253-364 (510)
95 2z0q_A XPLN, RHO guanine nucle 97.9 7.8E-05 2.7E-09 54.6 9.7 93 26-125 231-345 (346)
96 2rgn_B RHOA/RAC/CDC42 exchange 97.9 0.0004 1.4E-08 51.1 12.5 101 25-128 205-320 (354)
97 3ksy_A SOS-1, SON of sevenless 97.8 0.00019 6.5E-09 59.9 11.3 98 25-127 442-547 (1049)
98 1foe_A T-lymphoma invasion and 97.6 0.0027 9.1E-08 47.0 13.7 104 25-128 236-368 (377)
99 3v5w_A G-protein coupled recep 97.6 0.0023 7.9E-08 51.1 13.5 94 25-126 557-652 (689)
100 1fho_A UNC-89; pleckstrin homo 96.9 0.01 3.5E-07 36.9 8.3 103 21-126 4-112 (119)
101 1z87_A Alpha-1-syntrophin; pro 96.7 0.014 4.9E-07 41.2 9.0 53 72-126 206-262 (263)
102 2adz_A Alpha-1-syntrophin; pro 96.4 0.03 1E-06 37.2 8.3 53 72-126 121-177 (178)
103 3hie_A Protein PSL1, exocyst c 93.8 0.84 2.9E-05 30.0 9.0 84 42-129 63-151 (171)
104 3a58_A Exocyst complex compone 90.4 1.5 5.1E-05 31.5 7.4 85 41-129 132-221 (320)
105 2zkm_X 1-phosphatidylinositol- 89.1 7.4 0.00025 31.8 11.5 94 28-128 17-137 (799)
106 3qr0_A Phospholipase C-beta (P 88.3 7.8 0.00027 31.8 11.1 94 27-126 21-142 (816)
107 3a98_B Engulfment and cell mot 87.4 5 0.00017 27.1 9.5 35 93-127 116-151 (203)
108 3ohm_B 1-phosphatidylinositol- 86.2 5.4 0.00018 33.0 9.2 94 27-127 20-140 (885)
109 2rrf_A Zinc finger FYVE domain 68.9 19 0.00064 22.7 7.8 82 43-131 34-132 (141)
110 3ulb_A Target of rapamycin com 65.5 21 0.00071 22.0 12.1 83 43-128 27-116 (121)
111 3u12_A USP37 protein; structur 37.7 76 0.0026 20.0 8.5 90 26-124 19-121 (141)
112 2kdu_B MUNC13-1, protein UNC-1 22.2 75 0.0026 15.0 2.4 17 113-129 4-20 (36)
113 4emo_A Sharpin; pleckstrin hom 22.1 1.4E+02 0.0049 18.2 4.8 33 92-124 86-121 (129)
114 2x5r_A Hypothetical protein OR 21.9 70 0.0024 18.5 2.4 32 90-121 88-122 (127)
115 1hyw_A GPW, head-TO-tail joini 21.5 1.1E+02 0.0037 16.6 4.1 37 92-128 21-57 (68)
No 1
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.94 E-value=1.4e-26 Score=146.83 Aligned_cols=106 Identities=23% Similarity=0.375 Sum_probs=90.0
Q ss_pred cccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEc----cCCCCCCCCCccEEEeCCCeEEee--cCcccCCCCceEEE
Q 041556 25 SNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFK----DSHNITPGSTPRGVIPVGTCLTVR--GAEDLLNKPFAFEL 97 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~----~~~~~~~~~~~~~~i~L~~~~~~~--~~~~~~~~~~~f~i 97 (143)
.++.++|||+|+|+ .++.|++|||||.+..|+||+ ++. ...|.|+|.|.++++.. +.++...++++|.|
T Consensus 6 ~n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~----~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~ 81 (126)
T 1wi1_A 6 SGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREK----KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNA 81 (126)
T ss_dssp CCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSS----SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEE
T ss_pred CCCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEccccccc----CCCCceEEECCCcEEEEecCCcccccCceEEEE
Confidence 45789999999987 678999999999999999999 766 68899999999985432 33333468899999
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCCCc
Q 041556 98 STGEYTMYFVADTEKEKEEWINSIGRAIVQHSRSVTE 134 (143)
Q Consensus 98 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~~ 134 (143)
.+++++|+|+|+|++||..||.||.+|+.+..+..+.
T Consensus 82 v~~~~ty~~~Adseee~~~WikAi~~A~~~~~~~~~~ 118 (126)
T 1wi1_A 82 VKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPP 118 (126)
T ss_dssp ECSSCEEEEECSSHHHHHHHHHHHHHHHTCSSCCCCC
T ss_pred ecCCceEEEEcCCHHHHHHHHHHHHHHhccccCCCCC
Confidence 9998899999999999999999999999876666543
No 2
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.94 E-value=1.8e-25 Score=144.11 Aligned_cols=99 Identities=21% Similarity=0.444 Sum_probs=83.9
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC--
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-- 101 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-- 101 (143)
...++++|||+|++ ..+.|++|||||+++.|+||+++. +..+.+.|+|.+|.+++... ..++++|.|.++.
T Consensus 5 ~~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~----~~~p~G~I~L~~~~v~~~~~--~~~~~~F~i~~~~~~ 77 (130)
T 1v88_A 5 SSGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQK----NGQWVGTVLLNACEIIERPS--KKDGFCFKLFHPLEQ 77 (130)
T ss_dssp SSSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSS----SCCCCEEEECSSCEECCCCT--TTSSCEEEEECTTCC
T ss_pred CCceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCC----CCCceEEEEcCCCEEEECCC--CCCCeEEEEEcCCcc
Confidence 35678999999988 788999999999999999999998 78899999999987654332 2456999998653
Q ss_pred ----------------------eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 102 ----------------------YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 102 ----------------------~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+.|+|+|+|++|+++||.||+.++....
T Consensus 78 ~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~~ 127 (130)
T 1v88_A 78 SIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSGP 127 (130)
T ss_dssp CCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTTT
T ss_pred ccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 2488999999999999999999987543
No 3
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.94 E-value=9.9e-25 Score=137.28 Aligned_cols=105 Identities=24% Similarity=0.536 Sum_probs=91.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~ 103 (143)
.+++++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++.++....+...++++|.|.+++ +.
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~ 78 (113)
T 1pls_A 3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQD 78 (113)
T ss_dssp CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEE
T ss_pred CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC----CCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCE
Confidence 45789999999998889999999999999999999987 78899999999987765444444778999999875 89
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhcCCCC
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHSRSVT 133 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~ 133 (143)
|+|+|+|++|+..|+.+|+.++........
T Consensus 79 ~~l~a~s~~e~~~Wi~ai~~~~~~~~~~~~ 108 (113)
T 1pls_A 79 HFFQAAFLEERDAWVRDINKAIKCIEGLEH 108 (113)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEECCCHHHHHHHHHHHHHHHhccchhhh
Confidence 999999999999999999999987765543
No 4
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.93 E-value=5e-25 Score=144.93 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=85.6
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTM 104 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 104 (143)
..++++|||.|+++..+.|++|||||+++.|+||+++. +..+.+.|+|.+++++........+.++|.|.++++.|
T Consensus 16 ~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~----d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~ 91 (149)
T 1x1f_A 16 LPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKK----SIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEV 91 (149)
T ss_dssp SCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSS----CSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCE
T ss_pred CCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCC----ccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEE
Confidence 34789999999999889999999999999999999998 67888999999976553221112457899999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 105 YFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+|+|+|.+|+++||.||+.++...
T Consensus 92 ~f~A~s~ee~~eWi~aI~~v~~~~ 115 (149)
T 1x1f_A 92 QLKTENTESGEEWRGFILTVTELS 115 (149)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHSS
T ss_pred EEEcCCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999887743
No 5
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.93 E-value=4.4e-24 Score=133.52 Aligned_cols=98 Identities=20% Similarity=0.375 Sum_probs=85.6
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-eE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-YT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-~~ 103 (143)
.++.++|||+|++...+.|++|||||.++.|+||+++. +..+.+.|+|.++.++...+. ..++++|+|.+++ +.
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~----~~~~~~~i~L~~~~~~~~~~~-~~~~~~F~i~~~~~~~ 80 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASE----DVAALESQPLLGFTVTLVKDE-NSESKVFQLLHKGMVF 80 (109)
T ss_dssp CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTT----CSSCSEEEECSSEEEEECCCS-SCSSSEEEEEETTEEE
T ss_pred CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----cCccCceEECCCCEEEECCCC-CCCCcEEEEEeCCCeE
Confidence 55789999999998889999999999999999999988 678999999999877655443 2567999999875 67
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
|+|+|+|++|+..|+.+|+.++..
T Consensus 81 ~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 81 YVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHSC
T ss_pred EEEECCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988654
No 6
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=2e-24 Score=136.04 Aligned_cols=101 Identities=26% Similarity=0.419 Sum_probs=88.8
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTM 104 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 104 (143)
..++++|||.|++...+.|++|||||.++.|+||+++. +..+.+.|+|.++..+...++...++++|.|.++++.|
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~ 81 (115)
T 2dn6_A 6 SGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTF 81 (115)
T ss_dssp CSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTT----CSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEE
T ss_pred CCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCC----CcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEE
Confidence 56789999999998889999999999999999999987 67899999999865555544434678999999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 105 YFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+|+|+|++|++.|+.+|+.++....
T Consensus 82 ~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 82 EISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987654
No 7
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=6.1e-24 Score=134.26 Aligned_cols=101 Identities=29% Similarity=0.622 Sum_probs=87.8
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-cCCCCceEEEEe---
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-LLNKPFAFELST--- 99 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-~~~~~~~f~i~~--- 99 (143)
...++++|||.|++...+.|++|||||.++.|+||+++. +..+.+.|+|.++.++..... ...++++|.|.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~ 80 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----DTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW 80 (118)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----CCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCC
T ss_pred CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCC----CCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcc
Confidence 356789999999998888999999999999999999988 678999999999876544322 235689999988
Q ss_pred -----CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 -----GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 -----~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.+.|+|+|+|++|+..|+.+|+.++...
T Consensus 81 ~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114 (118)
T ss_dssp SSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred ccccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence 67899999999999999999999998754
No 8
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.92 E-value=6.5e-24 Score=135.91 Aligned_cols=103 Identities=31% Similarity=0.530 Sum_probs=89.1
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYT 103 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~ 103 (143)
...++++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++..+..... .+++++|.|.++++.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~ 89 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRT 89 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEE
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCC----CCCceeEEEccceEEEEeccc-CCCCCEEEEEeCCcE
Confidence 356789999999998888999999999999999999988 688999999999876654332 367899999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
|+|+|+|++++..|+.+|+.++......
T Consensus 90 ~~l~a~s~~e~~~Wi~al~~~i~~~~~~ 117 (126)
T 1fao_A 90 FYLCAKTGVEADEWIKILRWKLSQIRKQ 117 (126)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTC---
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999875433
No 9
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.92 E-value=1.1e-23 Score=134.73 Aligned_cols=99 Identities=38% Similarity=0.744 Sum_probs=86.4
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC--
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-- 101 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-- 101 (143)
+.+++++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++.++...+ ..++++|.|.+++
T Consensus 2 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~--~~~~~~f~i~~~~~~ 75 (127)
T 1fgy_A 2 FFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIREVLD--PRKPNCFELYNPSHK 75 (127)
T ss_dssp CSSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEEECC--SSCSSEEEEECSSST
T ss_pred CCCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCC----CCCcceEEECCceEEEEccC--CCCCceEEEecCCcc
Confidence 467899999999998889999999999999999999987 67899999999986554433 2678999998653
Q ss_pred --------------------eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 --------------------YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 --------------------~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|+|+|+|++|++.|+.+|+.++...
T Consensus 76 ~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 689999999999999999999998765
No 10
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=4.1e-24 Score=135.83 Aligned_cols=101 Identities=21% Similarity=0.406 Sum_probs=87.4
Q ss_pred ccccceEEEEEeeCC--CCCCeeeEEEEEECC--eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEe
Q 041556 24 WSNPERSGWLTKQGD--YIKTWRRRWFILKQG--KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST 99 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~--~~~~w~~r~~vL~~~--~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~ 99 (143)
..++.++|||.|+++ ..+.|++|||||.++ .|+||+++. +..+.+.|+|.++..+.... .++++|.|.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~~~~~~---~~~~~F~i~~ 77 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQ----DANPLDSIDLSSAVFDCKAD---AEEGIFEIKT 77 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTT----CCSCSEEEEGGGCEEEECTT---GGGCEEEEEC
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCC----CcccccEEECCCCEEEecCC---CCCCEEEEEe
Confidence 356789999999986 578999999999998 999999988 67899999999986664322 4578999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 100 GEYTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 100 ~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
+++.|+|+|+|++|++.||.+|+.++......
T Consensus 78 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 78 PSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998765433
No 11
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=4.4e-24 Score=134.14 Aligned_cols=99 Identities=18% Similarity=0.310 Sum_probs=83.6
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECC---eEEEEccCCCCCCCCCccEEEeCCCeEEeecC-cccCCCCceEEEEeC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQG---KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA-EDLLNKPFAFELSTG 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~---~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~-~~~~~~~~~f~i~~~ 100 (143)
.+.+++|||++++. .+.|++|||||+++ .|+||++++ +..+.+.|+|.+|.+.... .+...++++|+|..+
T Consensus 6 ~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~----d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~ 80 (112)
T 2coc_A 6 SGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQ----DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWA 80 (112)
T ss_dssp SSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTT----CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEET
T ss_pred CCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCC----ccCcceEEEcCCCEEEecCcccccCCCCEEEEecC
Confidence 45678899999765 78999999999985 799999998 7789999999999665322 222357899999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 101 EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 101 ~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+++|+|+|+|++++++||.+|+.|+...
T Consensus 81 ~~~y~f~A~s~e~~~~Wl~al~~A~~~~ 108 (112)
T 2coc_A 81 KQSWYLSASSAELQQQWLETLSTAAHSG 108 (112)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHSCC
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999886643
No 12
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.92 E-value=4.4e-24 Score=134.89 Aligned_cols=100 Identities=22% Similarity=0.495 Sum_probs=86.3
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEE--CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc------cCCCCceEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILK--QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED------LLNKPFAFE 96 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~------~~~~~~~f~ 96 (143)
..++++|||.|+++..+.|++|||||. ++.|+||+++. +..+.+.|+|..+..+..... ...++++|.
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~ 81 (117)
T 1v5u_A 6 SGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM----DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFD 81 (117)
T ss_dssp CSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSS----CSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEE
T ss_pred CCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCC----CCccceEEEccCcEEEeecCccccccccCCCCeEEE
Confidence 567899999999988899999999999 88999999988 678999999999876654331 134569999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 97 LSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 97 i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
|.++++.|+|+|+|+++++.|+.+|+.++...
T Consensus 82 i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 82 VKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113 (117)
T ss_dssp EEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred EECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999998876543
No 13
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=1.5e-23 Score=132.25 Aligned_cols=96 Identities=26% Similarity=0.506 Sum_probs=85.5
Q ss_pred cccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeE
Q 041556 25 SNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~ 103 (143)
..++++|||.|++. ..+.|++|||||.++.|+||+++. +..+.+.|+|..+..+...+ +++|.|.++++.
T Consensus 6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~-----~~~F~i~~~~r~ 76 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK----EMYSKGIIPLSAISTVRVQG-----DNKFEVVTTQRT 76 (115)
T ss_dssp SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC----CSSCCCEEETTTEEEEEEET-----TTEEEEEESSCC
T ss_pred CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCC----CcccCCEEECCcceEEEeCC-----CCEEEEEeCCcE
Confidence 56789999999987 678999999999999999999988 67899999999986665432 699999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
|+|+|++++|++.|+.+|+.++....
T Consensus 77 ~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 77 FVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999986554
No 14
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.92 E-value=6.2e-24 Score=133.41 Aligned_cols=97 Identities=25% Similarity=0.417 Sum_probs=82.3
Q ss_pred ccceEEEEEee-CCCCC-CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC--
Q 041556 26 NPERSGWLTKQ-GDYIK-TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE-- 101 (143)
Q Consensus 26 ~~~~~G~L~k~-~~~~~-~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~-- 101 (143)
.++++|||.++ ++.++ .|++|||||++.+|+||++.. ++.+.++|+|.+..+.+.......++|+|.|.+++
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~----eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r 86 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQR 86 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTT----CSCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSS
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCc----ccccceEEECCCceEeccCCCCCCCceEEEEECCCCc
Confidence 37999999995 55566 599999999999999999999 79999999999986655444434789999999864
Q ss_pred ------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 102 ------YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 102 ------~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
++|.|+|+|++|+.+|+.||.+|.-
T Consensus 87 ~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~v 117 (125)
T 1dyn_A 87 NVYKDYRQLELACETQEEVDSWKASFLRAGV 117 (125)
T ss_dssp CSSTTCSSEEEEESSHHHHHHHHHHHHHTTC
T ss_pred cccccceEEEEeCCCHHHHHHHHHHHHhCcc
Confidence 3899999999999999999977643
No 15
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.91 E-value=2.2e-23 Score=133.97 Aligned_cols=106 Identities=28% Similarity=0.459 Sum_probs=88.2
Q ss_pred ccccccccceEEEEEeeCCCCCCeeeEEEEEECC--eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----cCCCCc
Q 041556 20 GIEFWSNPERSGWLTKQGDYIKTWRRRWFILKQG--KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED----LLNKPF 93 (143)
Q Consensus 20 ~~~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~--~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~----~~~~~~ 93 (143)
..+....++++|||.|++...+.|++|||||.++ .|+||+++. +..+.+.|+|.++.+...... ...+++
T Consensus 11 ~~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~ 86 (129)
T 1x05_A 11 KEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEEN 86 (129)
T ss_dssp CSTTCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSC----CSSCSEEEECTTCEEEECCCCCCSSSCSSCS
T ss_pred cccccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCC----CCcceeEEEccCCEEEEccCCccccccCCCe
Confidence 3455677899999999998888999999999976 899999887 688999999999865543322 123789
Q ss_pred eEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 94 AFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 94 ~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+|.|.+++ +.|+|+|+|++|++.|+.||+.++....
T Consensus 87 ~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 123 (129)
T 1x05_A 87 LFEIITADEVHYFLQAATPKERTEWIKAIQMASRTGK 123 (129)
T ss_dssp EEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCCS
T ss_pred EEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHccC
Confidence 99999875 6799999999999999999999987543
No 16
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.91 E-value=7.7e-24 Score=129.15 Aligned_cols=92 Identities=26% Similarity=0.539 Sum_probs=79.7
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEE
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYF 106 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 106 (143)
+.++|||+|++...+.|++|||||.++.|+||+++.+. ...+.+.++|.++.++... ..+++|.|.++++.|+|
T Consensus 1 V~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~--~~~~~~~i~l~~~~~~~~~----~~~~~F~i~~~~r~~~l 74 (94)
T 2rsg_A 1 VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDET--EYGCRGSICLSKAVITPHD----FDECRFDISVNDSVWYL 74 (94)
T ss_dssp CCEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGG--GTCCSEEEETTTCEEEECS----SCSSEEEEEETTEEEEE
T ss_pred CCEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecccc--cccceeeEecceeeeecCc----ccceeEEEEeCCeEEEE
Confidence 46899999999988999999999999999999987631 3458899999997554322 46799999999999999
Q ss_pred EcCCHHHHHHHHHHHHHH
Q 041556 107 VADTEKEKEEWINSIGRA 124 (143)
Q Consensus 107 ~a~s~~e~~~Wi~al~~~ 124 (143)
+|+|++|+++|+.||++|
T Consensus 75 ~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 75 RAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp ECCSSCCTHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHhh
Confidence 999999999999999876
No 17
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.91 E-value=5.3e-23 Score=128.36 Aligned_cols=98 Identities=29% Similarity=0.478 Sum_probs=82.1
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECC--eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----cCCCCceEEE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQG--KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED----LLNKPFAFEL 97 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~--~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~----~~~~~~~f~i 97 (143)
..+++++|||.|+++..+.|++|||||.++ .|+||+++. +..+.+.|+|.++.+...... ..+++++|.|
T Consensus 4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i 79 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI 79 (109)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS----CSSCSEEEECTTCEEEEECC--------CCSEEEE
T ss_pred cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCC----CCCccEEEECCCCEEEEccCCcccccCCCceEEEE
Confidence 356789999999998888999999999986 999999887 688999999999865443322 1237899999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 98 STGE-YTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 98 ~~~~-~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
.+++ +.|+|+|+|++|+..|+.||+.++
T Consensus 80 ~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 80 ITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp ECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9885 669999999999999999999875
No 18
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.91 E-value=1.6e-23 Score=134.08 Aligned_cols=105 Identities=23% Similarity=0.317 Sum_probs=82.1
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCC-----CCCCCCccEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHN-----ITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~-----~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
+..+.++|||+|++...+.|++|||||+++.|+||+++.. ......+.|.|+|.+|.+....++...++++|+|.
T Consensus 9 ~~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~ 88 (124)
T 2w2x_D 9 KDEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILE 88 (124)
T ss_dssp ----CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEE
T ss_pred hhhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEE
Confidence 4678999999999988899999999999999999997431 11124468999999997655544434688999998
Q ss_pred eCC---eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 99 TGE---YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 99 ~~~---~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+++ +.|+|+|+|++|+.+||.||++++..+
T Consensus 89 ~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 89 PKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp ECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 763 679999999999999999999987654
No 19
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.91 E-value=3e-23 Score=132.45 Aligned_cols=103 Identities=31% Similarity=0.555 Sum_probs=88.6
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--ccCCCCceEEEEeCC
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DLLNKPFAFELSTGE 101 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~~f~i~~~~ 101 (143)
...++++|||+|++...+.|++|||||.++.|+||+++. +..+.+.|+|.++..+.... +...++++|.|.+++
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~ 86 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL----EKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS 86 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTT----CSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCC----CCcceeEEEcccceEEeeccccccCCcCCEEEEEeCC
Confidence 356789999999998888999999999999999999988 67899999999976554422 223578999999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
+.|+|+|+|++|+..|+.+|+.++.....
T Consensus 87 r~~~l~a~s~~e~~~W~~al~~~i~~~~~ 115 (125)
T 1eaz_A 87 RTFYVQADSPEEMHSWIKAVSGAIVAQRG 115 (125)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHHHTC-
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999887643
No 20
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.91 E-value=9.7e-23 Score=130.62 Aligned_cols=101 Identities=31% Similarity=0.561 Sum_probs=85.6
Q ss_pred ccccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-ccCCCCceEEEEeCC
Q 041556 24 WSNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-DLLNKPFAFELSTGE 101 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-~~~~~~~~f~i~~~~ 101 (143)
...++++|||.|++. ..+.|++|||||.++.|+||+++. +..+.+.|+|.++.+..... +...++++|.|.+++
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~ 93 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK----EEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPN 93 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSS
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCC
Confidence 355789999999987 678999999999999999999988 67899999999875544332 223678999999875
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 -YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 -~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|+|+|+|++|++.|+.+|+.++...
T Consensus 94 ~r~~~l~a~s~~e~~~Wi~al~~a~~~~ 121 (128)
T 2dkp_A 94 MRTYYFCTDTGKEMELWMKAMLDAALVQ 121 (128)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999987643
No 21
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.90 E-value=3.4e-23 Score=128.83 Aligned_cols=99 Identities=19% Similarity=0.475 Sum_probs=83.9
Q ss_pred ccceEEEEEeeCCCC----CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC--cccCCCCceEEEEe
Q 041556 26 NPERSGWLTKQGDYI----KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA--EDLLNKPFAFELST 99 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~----~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~--~~~~~~~~~f~i~~ 99 (143)
+++++|||.|++... +.|++|||||.++.|+||+++. +..+.+.|+|.++.+.... .....++++|.|.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~ 77 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTS 77 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEEC
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC----CCCCCEEEEecceEEEeCCccccccCCcceEEEEc
Confidence 468999999987432 7899999999999999999988 6789999999998654432 12235689999998
Q ss_pred CC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 GE-YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 ~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
++ +.++|+|+|++|+..|+.+|+.++...
T Consensus 78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 78 QDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp SSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 87 999999999999999999999998754
No 22
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=1.4e-22 Score=127.88 Aligned_cols=101 Identities=30% Similarity=0.614 Sum_probs=84.8
Q ss_pred cccceEEEEEeeC-CCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC-cccCCCCceEEEEeC-C
Q 041556 25 SNPERSGWLTKQG-DYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA-EDLLNKPFAFELSTG-E 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~-~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~-~~~~~~~~~f~i~~~-~ 101 (143)
..++++|||.|++ ...+.|++|||||.++.|+||+++. +..+.+.|+|.++.+.... .+...++++|.|..+ +
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~ 84 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV 84 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTT----CCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSS
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCC----CCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCC
Confidence 4578999999998 4678999999999999999999988 6789999999998654332 233467899999754 6
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+.|+|+|+|++|+..|+.+|+.++....
T Consensus 85 r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 112 (117)
T 2d9y_A 85 RTYFFSAESPEEQEAWIQAMGEAARVQS 112 (117)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCCTT
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999998876443
No 23
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=135.63 Aligned_cols=109 Identities=16% Similarity=0.310 Sum_probs=88.7
Q ss_pred cccccccceEEEEEeeCCC-----CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-----cCC
Q 041556 21 IEFWSNPERSGWLTKQGDY-----IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-----LLN 90 (143)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~-----~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-----~~~ 90 (143)
+.+..+++++|||.|++.. .+.|++|||||+++.|+||+++.+ ...+.+.|+|..+..++.... ...
T Consensus 9 ~~m~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~---~~~~~G~I~L~~~~~v~~~~~~~~~~~~~ 85 (164)
T 2lul_A 9 SHMNFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAE---KKYRKGFIDVSKIKCVEIVKNDDGVIPCQ 85 (164)
T ss_dssp CCCCSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSS---SCCCCCEEEGGGCCEEEECCCCSSSCCSS
T ss_pred ccCCCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCc---ccccccEEEEeeeEEEEeccccccCcccc
Confidence 4455688999999998753 246999999999999999998762 356789999998765544322 134
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCC
Q 041556 91 KPFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQHSRSV 132 (143)
Q Consensus 91 ~~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~ 132 (143)
.+++|+|.+++++|||+|+|++|+++||.||++++.......
T Consensus 86 ~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~~~ 127 (164)
T 2lul_A 86 NKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNNIM 127 (164)
T ss_dssp SCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChhhh
Confidence 579999999999999999999999999999999998765443
No 24
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.90 E-value=7.6e-23 Score=131.19 Aligned_cols=103 Identities=19% Similarity=0.416 Sum_probs=81.5
Q ss_pred cccceEEEEEeeC-CCCCCeeeEEEEEE---CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--ccCCCCceEEEE
Q 041556 25 SNPERSGWLTKQG-DYIKTWRRRWFILK---QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DLLNKPFAFELS 98 (143)
Q Consensus 25 ~~~~~~G~L~k~~-~~~~~w~~r~~vL~---~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~~f~i~ 98 (143)
.+..++|||.|++ ...+.|++|||||. +..|+||+++.+...+..+.|.|+|..+..|.... ....++++|.|.
T Consensus 13 ~~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~ 92 (126)
T 1v5p_A 13 RQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVIN 92 (126)
T ss_dssp CCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEE
T ss_pred CCCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEE
Confidence 3456899999998 56889999999999 55777778842211267899999999865554432 223567999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 99 TGEYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 99 ~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
++.++|+|+|+|++|+++||.||+.++..
T Consensus 93 t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 93 ALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp CSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988654
No 25
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.90 E-value=6.9e-23 Score=134.86 Aligned_cols=100 Identities=30% Similarity=0.554 Sum_probs=84.5
Q ss_pred ccccceEEEEEeeCC------CCCCeeeEEEEEECC-----eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCC
Q 041556 24 WSNPERSGWLTKQGD------YIKTWRRRWFILKQG-----KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKP 92 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~------~~~~w~~r~~vL~~~-----~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~ 92 (143)
...++++|||.|++. ..+.|++|||||.++ .|+||++... ...+.+.|+|.+|.++.... ..++
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~---~~~~~g~I~L~~~~~~~~~~--~~~~ 89 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI---SKEPKGSIFLDSCMGVVQNN--KVRR 89 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC---SSCCSEEECTTTCCEECCCC--SSCT
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC---CCCcCcEEecccCEEEecCC--CCCc
Confidence 466889999999973 457999999999987 9999998762 46799999999986664332 3678
Q ss_pred ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 93 FAFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 93 ~~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
++|.|.+++ +.|+|+|++++|+..|+.+|+.++...
T Consensus 90 ~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 90 FAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp TEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 999999985 899999999999999999999997643
No 26
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.90 E-value=1e-22 Score=128.10 Aligned_cols=97 Identities=19% Similarity=0.372 Sum_probs=78.9
Q ss_pred ceEEEEEeeCC----CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEe-ecCcccCCCCceEEEEeC-C
Q 041556 28 ERSGWLTKQGD----YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTV-RGAEDLLNKPFAFELSTG-E 101 (143)
Q Consensus 28 ~~~G~L~k~~~----~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~-~~~~~~~~~~~~f~i~~~-~ 101 (143)
.++|||.++++ ..+.|++|||||+++.|+||+++. +..+.+.|+|.++.+. ....+...++|+|+|.++ .
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~----~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~ 76 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRT----DVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDR 76 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSS----CCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTS
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCC----CCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCC
Confidence 37999997643 468999999999999999999988 6788999999975322 112233478999999865 6
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|+|+|+|++||++||.+|+.++...
T Consensus 77 ~~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 77 PCLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 799999999999999999999987754
No 27
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.90 E-value=2.8e-23 Score=139.44 Aligned_cols=104 Identities=18% Similarity=0.326 Sum_probs=82.7
Q ss_pred ccceEEEEEeeCCC-----CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecC---ccc-CCC-----
Q 041556 26 NPERSGWLTKQGDY-----IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGA---EDL-LNK----- 91 (143)
Q Consensus 26 ~~~~~G~L~k~~~~-----~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~---~~~-~~~----- 91 (143)
.++++|||.|++.. .+.|++|||||+++.|+||+++.+...+..+.|.|+|.++..++.. ++. ..+
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 46899999998642 4689999999999999999983110015789999999998666544 221 112
Q ss_pred ----------------CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 92 ----------------PFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 92 ----------------~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+++|+|.+++++|||+|+|++|+++||.||+.++....
T Consensus 82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~ 135 (169)
T 1btk_A 82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNS 135 (169)
T ss_dssp ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCS
T ss_pred cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHCc
Confidence 28999999999999999999999999999999988654
No 28
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.90 E-value=2e-22 Score=132.51 Aligned_cols=106 Identities=16% Similarity=0.327 Sum_probs=86.0
Q ss_pred cccccccceEEEEEeeCCC----CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--ccCCCCce
Q 041556 21 IEFWSNPERSGWLTKQGDY----IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DLLNKPFA 94 (143)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~----~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~~ 94 (143)
...+.+++++|||.|++.. .+.|++|||||.++.|+||+++. ...+.+.|+|.++.++.... ...+++++
T Consensus 11 ~~~~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~ 86 (148)
T 1u5f_A 11 AQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCC 86 (148)
T ss_dssp GGGCSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECTTSCSSTTGGGE
T ss_pred hhhCCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC----CcccceEEEcCCcEEEECCCcccCCCCccE
Confidence 3345788999999999853 36999999999999999999988 67899999999986554321 12355799
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 95 FELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 95 f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
|.|.+++ +.|+|+|+|++++..|+.+|+.++.....
T Consensus 87 F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 87 FEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp EEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred EEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999886 89999999999999999999999876543
No 29
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.90 E-value=1.8e-22 Score=130.16 Aligned_cols=100 Identities=18% Similarity=0.381 Sum_probs=81.1
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEE-ECCeEEEEccCCCCCCCCCccEEEeCCC-eEEee-------c-CcccCCCCce
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFIL-KQGKLFWFKDSHNITPGSTPRGVIPVGT-CLTVR-------G-AEDLLNKPFA 94 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL-~~~~l~~y~~~~~~~~~~~~~~~i~L~~-~~~~~-------~-~~~~~~~~~~ 94 (143)
..++++|||+|++...+.|++||||| .++.|+||+++. +..+.+.|.+.. +..+. . .++...++++
T Consensus 6 ~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~----~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~ 81 (130)
T 2d9v_A 6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDET----AQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGL 81 (130)
T ss_dssp CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSS----TTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTE
T ss_pred CceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCC----CCCcCceEecccceeEEeccccccccCCCCCCCcCcE
Confidence 45789999999998889999999999 899999999987 567888887763 32221 1 1122356899
Q ss_pred EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 95 FELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 95 f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
|+|.++ +++|+|+|+|++|+++||.||+.++...
T Consensus 82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~~ 116 (130)
T 2d9v_A 82 LTVNLREGSRLHLCAETRDDAIAWKTALMEANSTP 116 (130)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcCC
Confidence 999985 5899999999999999999999997643
No 30
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.90 E-value=1.9e-22 Score=129.86 Aligned_cols=103 Identities=19% Similarity=0.403 Sum_probs=81.7
Q ss_pred cccceEEEEEee----CC--CCCCeeeEEEEEECCeEEEEccCCCCC-------CCCCccEEEeCCCeEEeecCcccCCC
Q 041556 25 SNPERSGWLTKQ----GD--YIKTWRRRWFILKQGKLFWFKDSHNIT-------PGSTPRGVIPVGTCLTVRGAEDLLNK 91 (143)
Q Consensus 25 ~~~~~~G~L~k~----~~--~~~~w~~r~~vL~~~~l~~y~~~~~~~-------~~~~~~~~i~L~~~~~~~~~~~~~~~ 91 (143)
..+.++|||.++ ++ ..+.|++|||||.++.|+||+++.... ....|.+.|+|.+|.+.. ..+..++
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~kr 88 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH-GRHLSSR 88 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEE-CTTSCSS
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEE-CCCCCCC
Confidence 456899999985 23 237999999999999999999984210 145789999999986543 4444578
Q ss_pred CceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 92 PFAFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 92 ~~~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+++|+|.+++ +.|+|+|+|++|+++||.||+.++...
T Consensus 89 ~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 89 RNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp SSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 8999999874 789999999999999999999998764
No 31
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.90 E-value=4.3e-23 Score=131.67 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=82.8
Q ss_pred ccccceEEEEEeeCCC--------CCCeeeEEEEEECCeEEEEccCCCCCCCC--CccEEEeCCCeEEeecCcccCCCCc
Q 041556 24 WSNPERSGWLTKQGDY--------IKTWRRRWFILKQGKLFWFKDSHNITPGS--TPRGVIPVGTCLTVRGAEDLLNKPF 93 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~--------~~~w~~r~~vL~~~~l~~y~~~~~~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~ 93 (143)
...+.++|||.+++.. .+.|++|||||+++.|+||+++.+..... .+...|+|.++. +....+..+++|
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~-~~~~~~~~~r~~ 83 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQ-GSVAFDYRKRKH 83 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCE-EEECTTCSSCSS
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcE-EeecccccCCCC
Confidence 3567899999997642 67999999999999999999876311111 234578888874 334444457899
Q ss_pred eEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 94 AFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 94 ~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
+|.|.+++ +.|+|+|+|++|+++||.||+.++....+
T Consensus 84 ~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~~ 121 (123)
T 1wjm_A 84 VFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGPS 121 (123)
T ss_dssp EEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccCC
Confidence 99999775 89999999999999999999999886543
No 32
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=5.5e-22 Score=125.04 Aligned_cols=100 Identities=23% Similarity=0.357 Sum_probs=82.6
Q ss_pred cccceEEEEEeeCCCC-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeE
Q 041556 25 SNPERSGWLTKQGDYI-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYT 103 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~ 103 (143)
.+++++|||.|++... +.|++|||||.++.|+||+++. . .+.+.+.+..+.+ ...+ .++++|.|.++++.
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~----~-~~~~~i~l~~~~v-~~~~---~~~~~F~I~~~~r~ 78 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATS----N-RQPAKLNLLTCQV-KPNA---EDKKSFDLISHNRT 78 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSC----C-SCCEEEETTTSEE-EECS---SSSSCEEEEETTEE
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCC----C-CCCCEEEeeeeEE-EECC---CCCCEEEEEcCCcE
Confidence 5678999999998865 8999999999999999999976 3 4556666666643 3322 46789999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhcCCCC
Q 041556 104 MYFVADTEKEKEEWINSIGRAIVQHSRSVT 133 (143)
Q Consensus 104 ~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~ 133 (143)
|+|+|+|++|+..||.||+.++........
T Consensus 79 ~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 108 (114)
T 2da0_A 79 YHFQAEDEQDYVAWISVLTNSKEEALTMAF 108 (114)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999887655443
No 33
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.90 E-value=4.9e-23 Score=129.29 Aligned_cols=98 Identities=19% Similarity=0.406 Sum_probs=79.9
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEE-ECCeEEEEccCCCCCCCCCccEEEeCCCeE-------Eeec--CcccCCCCce
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFIL-KQGKLFWFKDSHNITPGSTPRGVIPVGTCL-------TVRG--AEDLLNKPFA 94 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL-~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~-------~~~~--~~~~~~~~~~ 94 (143)
..++++|||.|+++..+.|++||||| .++.|+||+++. +..+.+.|+|.... .+.. .++...++++
T Consensus 3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~----~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~ 78 (112)
T 3aj4_A 3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQT----RQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCM 78 (112)
T ss_dssp CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTT----CCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGE
T ss_pred cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCC----CCCCCccccccccceeecccccccccCCCCCCCcCcE
Confidence 35689999999998889999999999 899999999988 67788988887532 1211 2222234789
Q ss_pred EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 95 FELSTG-EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 95 f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
|.|.++ ++.|+|+|+|++|++.|+.||+.+..
T Consensus 79 F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 79 LQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 999865 89999999999999999999998864
No 34
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.90 E-value=9.1e-23 Score=126.24 Aligned_cols=95 Identities=23% Similarity=0.509 Sum_probs=79.4
Q ss_pred eEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC-CeEEEEE
Q 041556 29 RSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-EYTMYFV 107 (143)
Q Consensus 29 ~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-~~~~~~~ 107 (143)
++|||.|+++..+.|++|||||.++.|+||+++.+. ...+.+.|+|.++.+. ..+ ..+++|.|.++ ++.|+|+
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~--~~~~~g~i~L~~~~v~-~~~---~~~~~F~i~~~~~r~~~l~ 74 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDV--CKGSKGSIKMAVCEIK-VHS---ADNTRMELIIPGEQHFYMK 74 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----CCCSCEEEGGGCEEE-CCT---TCSSEEEEEETTTEEEEEE
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcc--cCCcccEEEeeeeEEE-EcC---CCCceEEEEeCCCCEEEEE
Confidence 589999999888999999999999999999998721 2358999999987543 332 35889999987 7999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhc
Q 041556 108 ADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 108 a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
|+|++|++.|+.+|+.++....
T Consensus 75 a~s~~e~~~Wi~al~~a~~~~~ 96 (103)
T 3rcp_A 75 AVNAAERQRWLVALGSSKASLT 96 (103)
T ss_dssp CSSHHHHHHHHHHHHTTSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998876543
No 35
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.90 E-value=3e-22 Score=127.51 Aligned_cols=100 Identities=27% Similarity=0.507 Sum_probs=84.0
Q ss_pred cccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-ccCCCCceEEEEeCC-
Q 041556 25 SNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-DLLNKPFAFELSTGE- 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-~~~~~~~~f~i~~~~- 101 (143)
..++++|||.|+++ ..+.|++|||||.++.|+||+++. +..+.+.|+|.++.+..... ....++++|.|.+++
T Consensus 9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~ 84 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSR----EESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGM 84 (123)
T ss_dssp SCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTS
T ss_pred CCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEECCCCEEEECCCCccCCCcEEEEEECCCC
Confidence 34689999999985 678999999999999999999988 67899999999985544332 223578999998876
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.|+|+|+|++|+..|+.+|+.++...
T Consensus 85 r~~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 85 RTYVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998754
No 36
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.90 E-value=9.1e-23 Score=130.99 Aligned_cols=104 Identities=24% Similarity=0.425 Sum_probs=84.9
Q ss_pred cccccccceEEEEEeeCCCCCCeeeEEEEEE--CCeEEEEccC-CCCCCCCCccEEEeCCCeEEeecCcc----c---CC
Q 041556 21 IEFWSNPERSGWLTKQGDYIKTWRRRWFILK--QGKLFWFKDS-HNITPGSTPRGVIPVGTCLTVRGAED----L---LN 90 (143)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~y~~~-~~~~~~~~~~~~i~L~~~~~~~~~~~----~---~~ 90 (143)
.+...+++++|||.|++...+.|++|||||. +..|+||+++ . ...+.+.|+|.+|.+...... . ..
T Consensus 12 ~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~----~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~ 87 (129)
T 1x1g_A 12 VELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE----ENRPVGGFSLRGSLVSALEDNGVPTGVKGNV 87 (129)
T ss_dssp CTTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC----CSSCSCCEESTTCCCEECCSSSSCSSCSSCC
T ss_pred cccCCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc----CCccceEEECcCCEEEEeCCCCCcccccCCC
Confidence 4455678999999999988899999999999 4799999987 4 578999999998754433221 0 11
Q ss_pred CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 91 KPFAFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 91 ~~~~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
++++|.|.+++ +.|+|+|+|++|++.|+.+|+.++...
T Consensus 88 ~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 126 (129)
T 1x1g_A 88 QGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGP 126 (129)
T ss_dssp CSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSSS
T ss_pred CCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 68999999886 679999999999999999999987543
No 37
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=4.7e-22 Score=126.42 Aligned_cols=98 Identities=30% Similarity=0.628 Sum_probs=82.6
Q ss_pred cccceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeec-CcccCCCCceEEEEeC-C
Q 041556 25 SNPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRG-AEDLLNKPFAFELSTG-E 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~-~~~~~~~~~~f~i~~~-~ 101 (143)
..++++|||+|+++ ..+.|++|||||.++.|+||+++. +..+.+.|+|.++.+... ..+...++++|.|.++ +
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~ 95 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV 95 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSS
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCC----CCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCC
Confidence 45689999999974 678999999999999999999988 678999999999753322 2233467899999755 6
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+.|+|+|+|++|++.|+.+|+.++.
T Consensus 96 r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 96 RTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998864
No 38
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=7.6e-23 Score=130.05 Aligned_cols=99 Identities=20% Similarity=0.488 Sum_probs=83.2
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEE--CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILK--QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~--~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
..+.++|||.|++...+.|++|||||. ++.|+||+++.+. ...+.+.|+|.++.+ .... .++++|.|.+++
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~--~~~~~g~I~L~~~~v-~~~~---~~~~~F~i~~~~~ 79 (120)
T 2d9x_A 6 SGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSR--NQKPRGTLQLAGAVI-SPSD---EDSHTFTVNAASG 79 (120)
T ss_dssp SCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGS--SSCCSEEEECTTCCE-ECCS---SSSSCEEECCSSS
T ss_pred CCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCccc--CCCccceEEcceEEE-EecC---CCCCEEEEEcCCC
Confidence 457899999999988889999999999 5799999988721 236899999999853 3332 467999999886
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+.|+|+|+|++|++.||.+|+.++....
T Consensus 80 r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 107 (120)
T 2d9x_A 80 EQYKLRATDAKERQHWVSRLQICTQHHT 107 (120)
T ss_dssp CCEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999987654
No 39
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=8.3e-23 Score=127.43 Aligned_cols=97 Identities=15% Similarity=0.303 Sum_probs=78.9
Q ss_pred cccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC-C
Q 041556 23 FWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-E 101 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-~ 101 (143)
...++.++|||.|+ ..+.|++|||||.++.|+||+++.+ ...+...|.|.+|.+ ....+ ..++++|.|.++ .
T Consensus 4 ~~~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~---~~~~~~~i~l~~~~v-~~~~~-~~~~~~F~i~~~~~ 76 (107)
T 2cof_A 4 GSSGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNR---SKVAQQPLSLVGCEV-VPDPS-PDHLYSFRILHKGE 76 (107)
T ss_dssp CCCCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTT---CSEEEEEECTTTCEE-ECCCB-TTBSCEEEEEETTE
T ss_pred CCCCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcc---cCCCeeEEeccceEE-EECCC-CCCCeEEEEEeCCC
Confidence 33567899999999 5679999999999999999999862 234566777888743 33332 367899999988 7
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
++|+|+|+|++|++.||.||+.++.
T Consensus 77 r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 77 ELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 8899999999999999999998755
No 40
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.89 E-value=4.9e-22 Score=126.30 Aligned_cols=98 Identities=16% Similarity=0.343 Sum_probs=80.4
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccC-------CCCceEEEEe
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLL-------NKPFAFELST 99 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~-------~~~~~f~i~~ 99 (143)
++++|||+|++...+.|++|||||+++.|+||+++... .+..|.+.|.|.+|.+.....+.. .+++.|.|..
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~-~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~ 84 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRK-KDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHA 84 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTT-TCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEE
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcC-cCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEe
Confidence 79999999999988999999999999999999987521 245699999999997665443321 2678899976
Q ss_pred CC-------eEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 100 GE-------YTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 100 ~~-------~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
.+ +.|+|+|+|.+|+++|+.+|+.++
T Consensus 85 ~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 85 KQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 54 589999999999999999999874
No 41
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.89 E-value=1.5e-23 Score=134.04 Aligned_cols=112 Identities=27% Similarity=0.520 Sum_probs=82.7
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEEC-CeEEEEccCCCCCCCCCccEEEeCCCeEEeec--CcccCCCCceEEEEe--
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQ-GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRG--AEDLLNKPFAFELST-- 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~-~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~--~~~~~~~~~~f~i~~-- 99 (143)
..++++|||.|++...+.|++|||||.+ +.|+||+++. ...+.+.|+|..+.++.. ......++++|+|.+
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~ 81 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQ 81 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCC----CSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEE
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCC----CCCCCceeEccceeEEeeeecccccCCCCEEEEEecC
Confidence 4578999999999888999999999995 6999999987 556777788877543211 111126789999985
Q ss_pred --CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCCCccceecccC
Q 041556 100 --GEYTMYFVADTEKEKEEWINSIGRAIVQHSRSVTESEVVDYDN 142 (143)
Q Consensus 100 --~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~~~~~~~~~~ 142 (143)
..+.|+|+|+|++|+..|+.||+.++...... .++.+++.+
T Consensus 82 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~--~~~~~~~~~ 124 (125)
T 1unq_A 82 WTTVIERTFHVETPEEREEWTTAIQTVADGLKKQ--EEEEMDFRS 124 (125)
T ss_dssp TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH--HHC------
T ss_pred CCCceeEEEEeCCHHHHHHHHHHHHHHHhhcccc--hhhhhhccc
Confidence 46889999999999999999999998765332 244444443
No 42
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.89 E-value=1.4e-22 Score=130.86 Aligned_cols=104 Identities=24% Similarity=0.491 Sum_probs=82.8
Q ss_pred cccceEEEEEee--CCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEE--eecCc-ccCCCCceEEEEe
Q 041556 25 SNPERSGWLTKQ--GDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLT--VRGAE-DLLNKPFAFELST 99 (143)
Q Consensus 25 ~~~~~~G~L~k~--~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~--~~~~~-~~~~~~~~f~i~~ 99 (143)
..+.++|||+|+ ++..+.|++|||||.++.|+||+++.+. ....|.+.|+|.+|.+ +...+ +...++++|.|.+
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~-~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~ 81 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDE-KRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT 81 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHH-TTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcc-cccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence 457899999998 7777899999999999999999954310 1368999999999853 33332 2236789999986
Q ss_pred --CC------------------eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 100 --GE------------------YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 100 --~~------------------~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
++ +.|+|+|+|++|+..||.||+.++....
T Consensus 82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~~ 131 (134)
T 2y7b_A 82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIR 131 (134)
T ss_dssp EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHh
Confidence 32 4799999999999999999999987653
No 43
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.89 E-value=6.9e-22 Score=136.99 Aligned_cols=100 Identities=17% Similarity=0.373 Sum_probs=85.8
Q ss_pred ccccceEEEEEeeCC----CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--ccCCCCceEEE
Q 041556 24 WSNPERSGWLTKQGD----YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DLLNKPFAFEL 97 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~----~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~~f~i 97 (143)
+.+++++|||+|++. ..+.|++|||||.++.|+||+++. ...+.+.|+|.++.++.... ....++++|.|
T Consensus 103 l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~----~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I 178 (211)
T 1u5e_A 103 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEI 178 (211)
T ss_dssp CSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSTTGGGEEEE
T ss_pred cCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCC----CccceEEEEeCCcEEEEcCCccccCCCCCEEEE
Confidence 456889999999975 357999999999999999999988 67899999999987765432 22356799999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 98 STGE-YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 98 ~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.+++ +.|+|+|++++++..|+.||+.++..
T Consensus 179 ~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 179 CAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 9885 99999999999999999999999874
No 44
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.87 E-value=7.1e-22 Score=122.63 Aligned_cols=95 Identities=18% Similarity=0.386 Sum_probs=75.4
Q ss_pred eEEEEEeeC--------CCCCCeeeEEEEEECCeEEEEccCCCCC--CCCCccEEEeCCCeEEeecCcccCCCCceEEEE
Q 041556 29 RSGWLTKQG--------DYIKTWRRRWFILKQGKLFWFKDSHNIT--PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS 98 (143)
Q Consensus 29 ~~G~L~k~~--------~~~~~w~~r~~vL~~~~l~~y~~~~~~~--~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~ 98 (143)
++|||.+++ ...+.|++|||||.++.|+||+++.+.. ....+...|+|.++.+ ....+..+++++|+|.
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~-~~~~~~~~~~~~F~i~ 79 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAIC-EVALDYKKKKHVFKLR 79 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEE-EECSSCCSSSSEEEEE
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEE-EEcccccCCccEEEEE
Confidence 589999997 5678999999999999999999876210 0123566899988743 3333445789999999
Q ss_pred eCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 041556 99 TGE-YTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 99 ~~~-~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+++ +.|+|+|+|++|+.+||.||+.|
T Consensus 80 ~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 80 LSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 764 99999999999999999999864
No 45
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.87 E-value=9.1e-22 Score=131.83 Aligned_cols=98 Identities=21% Similarity=0.533 Sum_probs=68.4
Q ss_pred ccceEEEEE----------eeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCC--eEEeecCcccCCCCc
Q 041556 26 NPERSGWLT----------KQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGT--CLTVRGAEDLLNKPF 93 (143)
Q Consensus 26 ~~~~~G~L~----------k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~--~~~~~~~~~~~~~~~ 93 (143)
++.++|||. |++...+.|++|||||.++.|+||+++.+. ...+.+.|+|.. |. +....+..++++
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~--~~~~~g~i~l~~~~~~-~~~~~~~~~~~~ 78 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQ--TTPSEEEQPISVNACL-IDISYSETKRKN 78 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC----------CEECSSCE-EEECSSSCSCSS
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCccc--ccccCCceEecccceE-EEeccccCCCCC
Confidence 568999999 555567899999999999999999998621 245677776655 43 323333347899
Q ss_pred eEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 94 AFELSTGEYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 94 ~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+|+|.++++.|+|+|++++|+..||.+|+.++.
T Consensus 79 ~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 79 VFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp EEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998754
No 46
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.86 E-value=9.2e-21 Score=140.10 Aligned_cols=100 Identities=38% Similarity=0.734 Sum_probs=86.0
Q ss_pred cccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC--
Q 041556 23 FWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-- 100 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-- 100 (143)
...++.++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++.+..... ..++++|+|.++
T Consensus 209 ~f~~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~----~~~p~G~I~L~~~~v~~~~~--~~~~~~F~I~~~~~ 282 (347)
T 2r09_A 209 TFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIREVED--PRKPNCFELYNPSH 282 (347)
T ss_dssp CCCCCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEEECC--SSCSSEEEEECSSS
T ss_pred cccccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCC----ccCCcEEEEcCCeEEEEccC--CCCCCEEEEEeCCc
Confidence 3456899999999998889999999999999999999988 67899999999986543332 368999999865
Q ss_pred --------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 101 --------------------EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 101 --------------------~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.+.|+|+|+|++|+..|+.+|+.++...
T Consensus 283 ~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 283 KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp TTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 3789999999999999999999987643
No 47
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.86 E-value=3.7e-21 Score=134.79 Aligned_cols=96 Identities=21% Similarity=0.591 Sum_probs=85.1
Q ss_pred cccceEEEEEeeCCCC-----CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEe
Q 041556 25 SNPERSGWLTKQGDYI-----KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~-----~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~ 99 (143)
.+++++|||.|++... +.|++|||||.++.|+||+++. +..+.+.|+|.++..+.... .++++|+|.+
T Consensus 56 ~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~----~~~~~g~I~L~~~~~v~~~~---~k~~~F~I~t 128 (228)
T 3tfm_A 56 QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS----EEKLKGTVEVRSAKEIIDNT---NKENGIDIIM 128 (228)
T ss_dssp CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTT----CCSEEEEEEGGGCSEEEEET---TTTSEEEEEC
T ss_pred CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCC----CcceeEEEEcCCCEEeccCC---CCCcEEEEEc
Confidence 4678999999998754 7999999999999999999998 67899999999986654332 5789999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 100 GEYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 100 ~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
+++.|+|+|+|++|++.|+.+|+.++..
T Consensus 129 ~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 129 ADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999873
No 48
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.85 E-value=1.3e-21 Score=124.80 Aligned_cols=102 Identities=14% Similarity=0.319 Sum_probs=79.8
Q ss_pred cccceEEEEEeeCC--------CCCCeeeEEEEEECCeEEEEccCCCCCC--CC--CccEEEeCCCeEEeecCcccCCCC
Q 041556 25 SNPERSGWLTKQGD--------YIKTWRRRWFILKQGKLFWFKDSHNITP--GS--TPRGVIPVGTCLTVRGAEDLLNKP 92 (143)
Q Consensus 25 ~~~~~~G~L~k~~~--------~~~~w~~r~~vL~~~~l~~y~~~~~~~~--~~--~~~~~i~L~~~~~~~~~~~~~~~~ 92 (143)
.++.++|||.++.. ..+.|++|||||+++.|+||+++.+... .. .+.+.|+|.++. +....+..+++
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~-v~~~~d~~kr~ 84 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAA-IEIASDYTKKK 84 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCC-CEECCSSSSST
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCE-EEeCCCCCCCC
Confidence 45679999988642 3579999999999999999999873110 00 123678898873 44455555789
Q ss_pred ceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 93 FAFELST-GEYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 93 ~~f~i~~-~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
|+|+|.+ +++.|+|+|+|++||++||.||+.++..
T Consensus 85 ~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred eEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 9999996 5789999999999999999999998764
No 49
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.85 E-value=1.8e-20 Score=119.77 Aligned_cols=101 Identities=26% Similarity=0.435 Sum_probs=78.5
Q ss_pred cccceEEEEEee-----CC--CCCCeeeEEEEEECCeEEEEccCCCCCCC--------CCccEEEeCCCeEEeecCc-cc
Q 041556 25 SNPERSGWLTKQ-----GD--YIKTWRRRWFILKQGKLFWFKDSHNITPG--------STPRGVIPVGTCLTVRGAE-DL 88 (143)
Q Consensus 25 ~~~~~~G~L~k~-----~~--~~~~w~~r~~vL~~~~l~~y~~~~~~~~~--------~~~~~~i~L~~~~~~~~~~-~~ 88 (143)
.++.++|+|.++ |. ..+.|+++||||+++.|+||+++...... ..+.+.|+|.+|. ++... +.
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~-v~~~~~d~ 84 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGAT-LSWAPKDK 84 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCE-EEECCGGG
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCE-EEeccccc
Confidence 457899999986 21 23589999999999999999987742111 1467899999984 44443 55
Q ss_pred CCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 89 LNKPFAFELSTG-EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 89 ~~~~~~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+++|+|+|.++ ++.|+|+|+|+++|.+|+.+|+++|.
T Consensus 85 ~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 85 SSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 688999999876 57899999999999999999999875
No 50
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.85 E-value=1.4e-20 Score=134.34 Aligned_cols=103 Identities=21% Similarity=0.421 Sum_probs=81.9
Q ss_pred cccceEEEEE--------eeCCC----CCCeeeEEEEEECCeEEEEccCCCC--CCCCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLT--------KQGDY----IKTWRRRWFILKQGKLFWFKDSHNI--TPGSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~--------k~~~~----~~~w~~r~~vL~~~~l~~y~~~~~~--~~~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
..++++|||. |.+.. .+.|++|||||.++.|+||+++... .....|.+.|+|.++.+.. ..+...
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~k 87 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS-VPEHPK 87 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEE-CTTCSS
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEE-CCcCCC
Confidence 4578999999 44444 7899999999999999999985311 0146789999999885543 333346
Q ss_pred CCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 91 KPFAFELST-GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 91 ~~~~f~i~~-~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
++++|+|.+ .++.|+|+|+|++|+++||.||+.++...
T Consensus 88 k~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 88 KEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp CSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 799999998 57899999999999999999999998765
No 51
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.85 E-value=3.3e-20 Score=119.13 Aligned_cols=103 Identities=19% Similarity=0.362 Sum_probs=70.8
Q ss_pred ccceEEEEEeeCC--CCCCeeeEEEEEEC-CeEEEEccCCCCC-------------CCCCccEEEeCCCeEEeec----C
Q 041556 26 NPERSGWLTKQGD--YIKTWRRRWFILKQ-GKLFWFKDSHNIT-------------PGSTPRGVIPVGTCLTVRG----A 85 (143)
Q Consensus 26 ~~~~~G~L~k~~~--~~~~w~~r~~vL~~-~~l~~y~~~~~~~-------------~~~~~~~~i~L~~~~~~~~----~ 85 (143)
.++++|||.|+++ ..+.|++|||||.+ +.|+||++..+.. ....+.+.|+|.++.+... .
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~ 82 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA 82 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence 3689999999943 57899999999996 7888887522100 0011233334443321100 0
Q ss_pred cccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 86 EDLLNKPFAFELSTGE-YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 86 ~~~~~~~~~f~i~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+....++++|.|.+++ ++|+|+|+|++|++.||.||+.++...
T Consensus 83 ~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 83 GQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp SSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 0011468999999887 899999999999999999999998753
No 52
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.85 E-value=6e-20 Score=116.90 Aligned_cols=103 Identities=18% Similarity=0.304 Sum_probs=79.9
Q ss_pred ceEEEEEee-----CCC--CCCeeeEEEEEECCeEEEEccCCCCC-----CCCCccEEEeCCCeEEeecCcccCCCCceE
Q 041556 28 ERSGWLTKQ-----GDY--IKTWRRRWFILKQGKLFWFKDSHNIT-----PGSTPRGVIPVGTCLTVRGAEDLLNKPFAF 95 (143)
Q Consensus 28 ~~~G~L~k~-----~~~--~~~w~~r~~vL~~~~l~~y~~~~~~~-----~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f 95 (143)
.++|+|.+. |.. .+.|+++||+|.++.|+||+...-.. -+..|.+.|+|.|+.+ +. .+...++++|
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V-~~-~e~~~~~~~F 79 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMV-QL-PDDPEHPDIF 79 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEE-EC-CCCTTSTTEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEE-Ee-cCCCCCCCEE
Confidence 468888854 442 57899999999999999999763110 1347899999999855 43 3334689999
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhhcCCC
Q 041556 96 ELSTG--EYTMYFVADTEKEKEEWINSIGRAIVQHSRSV 132 (143)
Q Consensus 96 ~i~~~--~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~ 132 (143)
+|.++ +..|.|+|+|++++..|+.||+.++.......
T Consensus 80 ~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~~~~ 118 (126)
T 2dtc_A 80 QLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRPQV 118 (126)
T ss_dssp EEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCCC--
T ss_pred EEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 99975 67899999999999999999999988655443
No 53
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.84 E-value=1.2e-20 Score=134.56 Aligned_cols=101 Identities=22% Similarity=0.490 Sum_probs=80.9
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECC-------eEEEEccCCCCCCC-CCccEEEeCCCeEEeecCcccCCCCceE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQG-------KLFWFKDSHNITPG-STPRGVIPVGTCLTVRGAEDLLNKPFAF 95 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~-------~l~~y~~~~~~~~~-~~~~~~i~L~~~~~~~~~~~~~~~~~~f 95 (143)
..+++++|||.|+ +.|++|||||.++ .|+||+++.+.... ..+.+.|+|..|..+....+ ..++++|
T Consensus 7 ~~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~-~~~~~~F 81 (264)
T 1qqg_A 7 FSDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD-SKNKHLV 81 (264)
T ss_dssp --CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC-SSCSSEE
T ss_pred CCCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccC-CCCCcEE
Confidence 4578999999998 6999999999988 99999988720001 57999999999876654433 3678999
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 96 ELSTGEYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 96 ~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
.|.+++++|+|+|+|++|++.|+.+|+.++....
T Consensus 82 ~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 82 ALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp EEEESSCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred EEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999877654
No 54
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.84 E-value=4.3e-20 Score=138.16 Aligned_cols=101 Identities=24% Similarity=0.522 Sum_probs=84.4
Q ss_pred ccccceEEEEEeeCCCC-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEE----eecCcccC-C--CCceE
Q 041556 24 WSNPERSGWLTKQGDYI-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLT----VRGAEDLL-N--KPFAF 95 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~----~~~~~~~~-~--~~~~f 95 (143)
..+++++|||.|+++.. +.|++|||||.++.|+||+++. +..+.|.|+|..+.. ....+... . .+++|
T Consensus 266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F 341 (386)
T 3lju_X 266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL----DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI 341 (386)
T ss_dssp SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTT----CSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEE
T ss_pred ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCC----CcccceEEEeecceeeeeecccCCccccccCCCcEE
Confidence 35678999999999876 8999999999999999999988 678999999976422 22222211 1 26999
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 96 ELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 96 ~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+|.+++++|+|+|+|++|+++||.||+.++..+
T Consensus 342 ~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~p 374 (386)
T 3lju_X 342 TIVTPDRKFLFACETESDQREWVAAFQKAVDRP 374 (386)
T ss_dssp EEECSSCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999864
No 55
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.82 E-value=1.4e-19 Score=135.52 Aligned_cols=100 Identities=18% Similarity=0.382 Sum_probs=79.8
Q ss_pred cccceEEEEEeeCCC--C-CCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC
Q 041556 25 SNPERSGWLTKQGDY--I-KTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~--~-~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~ 101 (143)
..+.++|||+|++.. . +.|++|||||+++.|+||++ . +..+.+.|+|.+|.+..... ..++++|.|.+++
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~----~~~~~~~i~l~~~~v~~~~~--~~r~~~F~i~t~~ 348 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-G----DVAGGLAMDIDNCSVMAVDC--EDRRYCFQITSFD 348 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-S----CSSCEEEEECTTCEEEEECC--TTCSSEEEEECTT
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-C----CcCCCceEEccceEEEeccc--cCCCceEEEEeCC
Confidence 467899999999764 3 37999999999999999999 3 35678999999986543322 2678999999998
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 102 --YTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 102 --~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
++|+|+|+|++|++.||.||+.++......
T Consensus 349 ~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~~ 380 (385)
T 2q13_A 349 GKKSSILQAESKKDHEEWICTINNISKQIYLS 380 (385)
T ss_dssp SCBCCCEECSSHHHHHHHHHHHHHHHTTCC--
T ss_pred CCeEEEEEeCCHHHHHHHHHHHHHHHHhhccc
Confidence 899999999999999999999998765443
No 56
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.81 E-value=9.5e-20 Score=137.25 Aligned_cols=98 Identities=21% Similarity=0.412 Sum_probs=79.7
Q ss_pred cccceEEEEEee---CCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC
Q 041556 25 SNPERSGWLTKQ---GDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE 101 (143)
Q Consensus 25 ~~~~~~G~L~k~---~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~ 101 (143)
..+.++|||+++ |...+.|++|||||+++.|+||+... ..+.+.++|.+|.+. ..+. ..+++||.|.+++
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~-----~~~~~~~~l~~~~v~-~~~~-~~r~~cF~i~~~~ 371 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA-----VAGGLIQDLDNCSVM-AVDC-EDRRYCFQITTPN 371 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC-----SSCCCCBCSSCCEEE-EECC-TTCSSEEEEECTT
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC-----CCCCeEEECCceEEE-ECCC-CCCCceEEEEecC
Confidence 456799999997 44457899999999999999998765 456778899998554 3322 2678999999875
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 102 --YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 102 --~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
++|+|+|+|++|+..||.||+.++....
T Consensus 372 ~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~~ 401 (407)
T 4h8s_A 372 GKSGIILQAESRKENEEWICAINNISRQIY 401 (407)
T ss_dssp SSCCEEEECSSSHHHHHHHHHHHHHHSCC-
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHHHHHhh
Confidence 6899999999999999999999987654
No 57
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.80 E-value=2.1e-19 Score=134.40 Aligned_cols=98 Identities=20% Similarity=0.422 Sum_probs=80.0
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEE--ECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEE---
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFIL--KQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELS--- 98 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL--~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~--- 98 (143)
++..+++|||.|+|+..+.|++||||| .++.|+||+++. +..|.+.|.|.++..+.. ++..+++++|+|.
T Consensus 143 ~~~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~----~~~p~g~I~L~~~~~~~~-~~~~~~~~~f~I~~~~ 217 (386)
T 3lju_X 143 YSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND----AKEPKAVMKIEHLNATFQ-PAKIGHPHGLQVTYLK 217 (386)
T ss_dssp HHSSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEEC-HHHHTSTTCEEEEEEE
T ss_pred ccccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCC----ccCcccEEEeeccEEEEc-ccccCCCceEEEEEec
Confidence 345679999999999999999999999 899999999988 789999999999755542 2223689999997
Q ss_pred -eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 99 -TGEYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 99 -~~~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
++.+.|+|+|+|.+++.+|+.+|+.+..
T Consensus 218 ~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 218 DNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp TTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 5678999999999999999999998743
No 58
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.80 E-value=1.5e-18 Score=112.61 Aligned_cols=100 Identities=22% Similarity=0.467 Sum_probs=80.4
Q ss_pred ceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCC---------CCC---------------------------------
Q 041556 28 ERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSH---------NIT--------------------------------- 65 (143)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~---------~~~--------------------------------- 65 (143)
++.|+|++++...+.|++|||||+++.|+|++... +..
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 68999999999889999999999999999988111 000
Q ss_pred ---CCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 66 ---PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE---YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 66 ---~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~---~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.+...+|.|+|.||.+.........++++|.|.+++ +.|+|.|+|+++|.+||.||++|+..
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 001127999999997766555555789999999874 48999999999999999999998753
No 59
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.78 E-value=9.5e-19 Score=126.16 Aligned_cols=98 Identities=22% Similarity=0.397 Sum_probs=76.6
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEe---CCCeEEeecCcc----cCCCCceEEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIP---VGTCLTVRGAED----LLNKPFAFEL 97 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~---L~~~~~~~~~~~----~~~~~~~f~i 97 (143)
..|.++|||++++...+.|++|||||+++.|+||++.. ...+.+.+. +..+.+...... ...++|+|.|
T Consensus 166 ~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 166 IVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGK----TKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTC----CSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred CCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCc----cccccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence 35789999999999889999999999999999999887 555555544 444433322221 1356899999
Q ss_pred EeCC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 98 STGE------YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 98 ~~~~------~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+++ +.|+|+|+|++++..||.||+.|..
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 8753 5699999999999999999998753
No 60
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.77 E-value=2e-18 Score=109.06 Aligned_cols=98 Identities=18% Similarity=0.477 Sum_probs=75.7
Q ss_pred ceEEEEEe--eCCCCC-CeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc-------cCCCCceEEE
Q 041556 28 ERSGWLTK--QGDYIK-TWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED-------LLNKPFAFEL 97 (143)
Q Consensus 28 ~~~G~L~k--~~~~~~-~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~-------~~~~~~~f~i 97 (143)
.++|||.+ +++..+ .|++|||||.+..|+||+.+... ....|.+.|+|+.+..|+.... ....++.|+|
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~-~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I 80 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDK-EQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQI 80 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHH-HTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEE
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCc-ccCCceEEEECcccEEEEEcccccccccccccCCcEEEE
Confidence 36899996 666667 89999999999999999986510 0136789999987655443321 1224688999
Q ss_pred EeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 98 STG------EYTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 98 ~~~------~~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
... .+.+||.|+|++|++.|+.+|++++.
T Consensus 81 ~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 81 LYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 753 58999999999999999999998764
No 61
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.2e-17 Score=102.73 Aligned_cols=105 Identities=24% Similarity=0.290 Sum_probs=85.3
Q ss_pred cccccceEEEEEeeC--CCCCCeeeEEEEEEC------CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc---CCC
Q 041556 23 FWSNPERSGWLTKQG--DYIKTWRRRWFILKQ------GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL---LNK 91 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~--~~~~~w~~r~~vL~~------~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~---~~~ 91 (143)
+..+++++|||+++. .+.+.|+++||||.. ..|-+|++++.......++.+|.|+.|..|.+.... .+.
T Consensus 8 m~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~ 87 (127)
T 2d9w_A 8 MGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRD 87 (127)
T ss_dssp SCCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSS
T ss_pred ccCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCc
Confidence 446789999999986 455679999999974 389999998854444578899999999777665432 345
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 92 PFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 92 ~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.+.|.|.|++++|+|+|++ .|+.+|+.+|...+...
T Consensus 88 ~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~aF~~ 123 (127)
T 2d9w_A 88 TSAFFLETKERLYLLAAPA-AERGDWVQAICLLAFSG 123 (127)
T ss_dssp CEEEEEEESSCEEEEEECH-HHHHHHHHHHHHHHTSS
T ss_pred ceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHHhcCC
Confidence 6899999999999999996 49999999999887654
No 62
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=5.2e-18 Score=108.25 Aligned_cols=99 Identities=18% Similarity=0.355 Sum_probs=78.8
Q ss_pred ccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 26 NPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
.|..++||...+. .++.|++|||+|++..|+||+++.+. ...|.+.|+|.+|.+. +.......++.|.+..+.
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~--~~ePig~I~L~gceV~-pd~~~~~~kf~ikl~iPs~ 84 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEA--PGDPIQQLNLKGCEVV-PDVNVSGQKFCIKLLVPSP 84 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTT--TSCCSCCBCTTTCEEE-ECCBGGGTBEEEEEEEECS
T ss_pred CcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhc--cCCCceEEECCCCEEe-ccccccCCceEEEEEccCC
Confidence 4678899998754 45789999999999999999998821 1389999999999644 332223567888776543
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 102 ---YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 102 ---~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
+.|+|.|+|++++.+||.|++.|...
T Consensus 85 ~g~r~y~l~cdsEeqy~~WMaA~rlAskg 113 (137)
T 2ys3_A 85 EGMSEIYLRCQDEQQYARWMAGCRLASKG 113 (137)
T ss_dssp SSEEEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred CCceEEEEECCCHHHHHHHHHHHHHhccC
Confidence 88999999999999999999987644
No 63
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.71 E-value=4.9e-17 Score=116.20 Aligned_cols=102 Identities=23% Similarity=0.416 Sum_probs=78.8
Q ss_pred cccceEEEEEee-----C-------CCCCCeeeEEEEEECCeEEEEccCCCCCC--CCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQ-----G-------DYIKTWRRRWFILKQGKLFWFKDSHNITP--GSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~-----~-------~~~~~w~~r~~vL~~~~l~~y~~~~~~~~--~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
..+.++|||.++ + ...+.|+++||||.++.|+||+++..... ...+.+.|.|.++.+. ...+..+
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~-~a~d~~k 87 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQ-AVPEHPK 87 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEEC-CCTTSSS
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEE-eccccCC
Confidence 567899999753 1 13579999999999999999998763211 2356778999998544 3445557
Q ss_pred CCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 91 KPFAFELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 91 ~~~~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
++|+|.|.++ ++.|+|+|++++||..|+.+|+.++..
T Consensus 88 Kk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 88 KDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAA 125 (279)
T ss_dssp SCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 8999999875 678999999999999999999998874
No 64
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.67 E-value=1.8e-15 Score=98.87 Aligned_cols=101 Identities=16% Similarity=0.326 Sum_probs=79.1
Q ss_pred ccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC--
Q 041556 26 NPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-- 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-- 100 (143)
.|...+||..... .++.|+++|||+++..|+||+++++. ...|.+.|+|.||.+. +.......++.|.+.-+
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~--~geP~~~I~LrGCEVt-pDVnva~~Kf~IkL~vP~~ 122 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES--SGTPAHQMNLRGCEVT-PDVNISGQKFNIKLLIPVA 122 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGC--SSCCSEEEECTTCEEE-EEEETTTTEEEEEEEEEET
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHh--cCCCceEEecCceEEe-ccccccccceeEEEeccCC
Confidence 4668899987543 46899999999999999999999843 3679999999999654 32222356677776433
Q ss_pred --CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 101 --EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 101 --~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
...++|.|+++.++.+|+.|++-|....+
T Consensus 123 ~gm~e~~Lrcd~E~qya~WMAAcrLAskGkt 153 (173)
T 4f7h_A 123 EGMNEIWLRCDNEKQYAHWMAACRLASKGKT 153 (173)
T ss_dssp TEEEEEEEEESSHHHHHHHHHHHHHHHTTCC
T ss_pred CCcceeeeecCCHHHHHHHHHHhhhhccCCc
Confidence 46799999999999999999998877643
No 65
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.65 E-value=4.1e-15 Score=105.22 Aligned_cols=99 Identities=13% Similarity=0.250 Sum_probs=78.5
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccE---EEeCCCeEEeecCcc----cCCCCceEEEE
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRG---VIPVGTCLTVRGAED----LLNKPFAFELS 98 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~---~i~L~~~~~~~~~~~----~~~~~~~f~i~ 98 (143)
.|..+|||++++...+.|++|||+|+++.|+||+..+ .+.+++ .+.|++..+...... ....+++|.|.
T Consensus 131 ~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~----sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik 206 (256)
T 3hk0_A 131 SPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGT----SAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIK 206 (256)
T ss_dssp CEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTT----CCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEE
T ss_pred CCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCC----CCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEE
Confidence 4678999999988889999999999999999999776 445554 478998766554422 13457999998
Q ss_pred eCC------eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 99 TGE------YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 99 ~~~------~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+.. ..++|+|++++++..|+.||+.+....
T Consensus 207 ~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g~ 242 (256)
T 3hk0_A 207 PNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGM 242 (256)
T ss_dssp ETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHTH
T ss_pred cccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhhH
Confidence 653 369999999999999999999886543
No 66
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.63 E-value=8e-15 Score=94.91 Aligned_cols=101 Identities=18% Similarity=0.350 Sum_probs=76.7
Q ss_pred ccceEEEEEeeCC---CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC--
Q 041556 26 NPERSGWLTKQGD---YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-- 100 (143)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-- 100 (143)
.|...+||...+. .++.||++||++++..|+||+++++. ...|.+.|+|.||.+. +.......++.|.|.-+
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~--~geP~~~inLrGCEVt-PDVnva~~Kf~ikL~ip~~ 101 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE--QGEPIEKLNLRGCEIV-PDVNVSGRKFGIKLLIPVA 101 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT--TSCCSEEEECTTCEEE-EEEETTTTEEEEEEEEEET
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh--cCCCceEEecCccEEe-cccccccceeeEEEecCCC
Confidence 4668899987543 46899999999999999999999853 3679999999999654 22122256788887543
Q ss_pred --CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 101 --EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 101 --~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
...++|.|+++.+..+|+.|++-|....+
T Consensus 102 ~gm~e~~LrcdsE~QYa~WMAAcrLAskGkT 132 (165)
T 4bbk_A 102 DGMNEVYLRCDHEDQYARWMAACILASKGKT 132 (165)
T ss_dssp TEEEEEEEEESSHHHHHHHHHHHHHHHTTCC
T ss_pred CcceeeeeecCCHHHHHHHHHHhhhcccccc
Confidence 35789999999999999999998876543
No 67
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.60 E-value=1.1e-14 Score=104.10 Aligned_cols=103 Identities=18% Similarity=0.378 Sum_probs=75.1
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----cCCCCceEEEEeC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED----LLNKPFAFELSTG 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~----~~~~~~~f~i~~~ 100 (143)
..|..+|||++++...+.|++|||+|+++.|+||..... ....+..+.+.|+++.+...... ....+++|.|..+
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~s-k~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~ 234 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKA-KVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHP 234 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC----------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECT
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCC-CccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecC
Confidence 346789999999888889999999999999998887651 11233456778998755443321 2356899999864
Q ss_pred ------CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 101 ------EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 101 ------~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
...++|+|++++++..|+.||+.+.-..
T Consensus 235 ~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g~ 268 (281)
T 4gmv_A 235 QIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGK 268 (281)
T ss_dssp TCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHTH
T ss_pred ccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhCc
Confidence 3579999999999999999999886543
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.57 E-value=6.9e-15 Score=111.52 Aligned_cols=98 Identities=29% Similarity=0.533 Sum_probs=71.7
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEE-CCeEEEEccCCCCCCCCCccEEEeCCCeEEee--cCcccCCCCceEEEEeCC-
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILK-QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVR--GAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~-~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~--~~~~~~~~~~~f~i~~~~- 101 (143)
.++++|||.|+|+..+.|++|||+|. ++.|+||+++. ...+.+.++|..+++.. .......++++|.|...+
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~ 80 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 80 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCC----CCCccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence 47899999999999999999999997 89999999988 67777888887743221 111112568999997653
Q ss_pred eE---EEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 102 YT---MYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 102 ~~---~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.. ..|.+++.+++..|+.||+.++..
T Consensus 81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 81 TTVIERTFHVETPEEREEWTTAIQTVADG 109 (446)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred ceeeeeEEecCCHHHHHHHHHHHHhhhhh
Confidence 22 268999999999999999998543
No 69
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.55 E-value=5.9e-14 Score=91.03 Aligned_cols=97 Identities=21% Similarity=0.269 Sum_probs=80.2
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTM 104 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 104 (143)
..+++.|+|.|+.+. .|++|||+|++...+||-++. ....+|.|+++....++.-. ...|.|.+++++|
T Consensus 50 e~Ilk~G~v~KrkGl--~~kkR~liLT~~PrL~Yvdp~----~~~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY 118 (151)
T 1w1g_A 50 NLILKMGPVDKRKGL--FARRRQLLLTEGPHLYYVDPV----NKVLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTY 118 (151)
T ss_dssp CCEEEEEEEEEEETT--EEEEEEEEEETTTEEEEEETT----TTEEEEEECCCTTCEEEESS-----SSEEEEEETTEEE
T ss_pred CcEEEEEEEEecccC--cceeEEEEEcCCceEEEEcCc----cccccceEecCCCeeEEEcC-----CCEEEEECCCceE
Confidence 357899999997654 499999999999999999988 67899999999865555432 4599999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhcCCCC
Q 041556 105 YFVADTEKEKEEWINSIGRAIVQHSRSVT 133 (143)
Q Consensus 105 ~~~a~s~~e~~~Wi~al~~~~~~~~~~~~ 133 (143)
+|.+. ..++++|+.||+.++........
T Consensus 119 ~~~d~-~~~AqeWv~aI~~~~~~~~~~~~ 146 (151)
T 1w1g_A 119 YLMDP-SGNAHKWCRKIQEVWRQRYQSHP 146 (151)
T ss_dssp EEECT-TSCHHHHHHHHHHHHHHHHCC--
T ss_pred EEEcC-ccCHHHHHHHHHHHHHHHhccCc
Confidence 99987 78899999999999987665443
No 70
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=4.6e-13 Score=84.06 Aligned_cols=101 Identities=20% Similarity=0.378 Sum_probs=85.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-----CCCCceEEEEe
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-----LNKPFAFELST 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-----~~~~~~f~i~~ 99 (143)
+.++++|||-+.+...+.|+|+|++|..+.+.+|+++. .......|+|..+..++..... ...+|||.|.+
T Consensus 6 s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T 81 (129)
T 2d9z_A 6 SGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNES----GSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT 81 (129)
T ss_dssp TTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSS----CCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC
T ss_pred CceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeceeeHHHhcccccccCccccCCCCCCceEEEEE
Confidence 56799999999988778999999999999999999988 7888889999998777665432 12469999999
Q ss_pred CCeEEEEEcCC---------------HHHHHHHHHHHHHHHHhhc
Q 041556 100 GEYTMYFVADT---------------EKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 100 ~~~~~~~~a~s---------------~~e~~~Wi~al~~~~~~~~ 129 (143)
.+.+||..++. .+.++.|..||++|+.-..
T Consensus 82 ~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP~~ 126 (129)
T 2d9z_A 82 DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMSGP 126 (129)
T ss_dssp SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccCCC
Confidence 99999987643 6899999999999987553
No 71
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.54 E-value=1.2e-13 Score=86.51 Aligned_cols=100 Identities=21% Similarity=0.358 Sum_probs=84.1
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-----CCCCceEEEE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-----LNKPFAFELS 98 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-----~~~~~~f~i~ 98 (143)
.+.++++|||-+.+...+.|+|+|++|....+.+|+++. ...+...|+|..+..++..... ...+|||.|.
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~ 80 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNT----TNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV 80 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSS----CSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence 366899999999998888999999999999999999988 7889999999987777665322 1367999999
Q ss_pred eCCeEEEEEcC-----------CHHHHHHHHHHHHHHHHh
Q 041556 99 TGEYTMYFVAD-----------TEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 99 ~~~~~~~~~a~-----------s~~e~~~Wi~al~~~~~~ 127 (143)
+.+.+||..++ -.+.++.|..||++|+.-
T Consensus 81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 99999998863 125699999999999764
No 72
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.09 E-value=2.6e-09 Score=68.27 Aligned_cols=105 Identities=15% Similarity=0.240 Sum_probs=77.4
Q ss_pred cccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC-
Q 041556 23 FWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE- 101 (143)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~- 101 (143)
.+.+++..+-+..+......-+.|||+|.++.|.|...... .......+.++|.+..+. ..++....+|+|.|..+.
T Consensus 24 ~lG~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~-~~~f~~kgklPL~g~~V~-~~ed~~~~~~aFeI~g~~~ 101 (132)
T 1v61_A 24 TLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPR-MSGFMYQGKIPIAGMVVN-RLDEIEGSDCMFEITGSTV 101 (132)
T ss_dssp TTCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSS-SSCCEEEEEECTTTCBCS-TTCSSSSSCCCEEEECSSS
T ss_pred hcCCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCC-CceEEEEEEEecceeEEE-eccccccCccEEEEecCCC
Confidence 34566666666665433345689999999998877665431 113456789999997544 344434679999999875
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 102 YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 102 ~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
..+.+.|.|.+|++.|+.+|+.+++.+.
T Consensus 102 ~~i~v~~~s~eE~~~Wl~~L~~~i~~~~ 129 (132)
T 1v61_A 102 ERIVVHCNNNQDFQEWMEQLNRLTKSGP 129 (132)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHHHTTSC
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 8899999999999999999999988664
No 73
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.95 E-value=5.9e-08 Score=61.11 Aligned_cols=100 Identities=19% Similarity=0.307 Sum_probs=76.6
Q ss_pred cccceEEEEEeeCC--------CCCCeeeEEEEEEC------CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc--cc
Q 041556 25 SNPERSGWLTKQGD--------YIKTWRRRWFILKQ------GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE--DL 88 (143)
Q Consensus 25 ~~~~~~G~L~k~~~--------~~~~w~~r~~vL~~------~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~--~~ 88 (143)
....++|.|..... ....|++++++|.. -.|-+|.+++ ...|+..|.+..+..+.... +.
T Consensus 16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk----ssKpK~~i~cs~I~EVR~tt~LEm 91 (136)
T 1v5m_A 16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK----ASRPKVSIPLSAIIEVRTTMPLEM 91 (136)
T ss_dssp CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT----SSSCSSCEETTTCCBCCCCCCSSS
T ss_pred ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCc----ccCCccccchhhhhhhhhcccccc
Confidence 45689999976421 33589999999962 3678898888 67888888888764443332 22
Q ss_pred CCCCceEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 89 LNKPFAFELSTGEY-TMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 89 ~~~~~~f~i~~~~~-~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
..+.|.|.|...++ .|+|.|.++.+++.|+..|+.+....
T Consensus 92 PD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~g 132 (136)
T 1v5m_A 92 PEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSG 132 (136)
T ss_dssp CCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHHS
T ss_pred CCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCCC
Confidence 45789999988765 79999999999999999999887753
No 74
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=98.95 E-value=7.6e-09 Score=70.86 Aligned_cols=99 Identities=14% Similarity=0.260 Sum_probs=79.8
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEEC------C-eEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQ------G-KLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL 97 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~------~-~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i 97 (143)
...+.||++..+.+. .|+.|||||+. - .|..|++..++.+....+..+.|..+..++..-...+..|.+.|
T Consensus 7 ~~~v~eg~vk~r~~K--kWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAI 84 (224)
T 3ml4_A 7 EAALVEGQVKLRDGK--KWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTLAI 84 (224)
T ss_dssp CCCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEE
T ss_pred cceeEEEeeeeecCC--ceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEEEE
Confidence 446789999887654 89999999973 1 67899887754445677889999998788776555577899999
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 98 STGEYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 98 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
+..+.++.|.+++.+++..|...|+...
T Consensus 85 Ic~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 85 ICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp EESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred EecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999998654
No 75
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.94 E-value=6.5e-08 Score=60.30 Aligned_cols=100 Identities=16% Similarity=0.045 Sum_probs=72.5
Q ss_pred cceEEEEEeeCC-CCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEE
Q 041556 27 PERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMY 105 (143)
Q Consensus 27 ~~~~G~L~k~~~-~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~ 105 (143)
.+++|.|.+... ..+.-++++|+|-+..|.|-.........-.....++|.+..++... +...-++.|.|....+.+.
T Consensus 8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~-d~~~~~n~f~i~~~~~s~~ 86 (113)
T 1zc3_B 8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVK-DNPPMKDMFKLLMFPESRI 86 (113)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEEC-CBTTBSSEEEEEETTEEEE
T ss_pred EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECC-CCcccceEEEEEeCCceEE
Confidence 467899988754 33445678899998888777664311001122346788886555433 3335699999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHh
Q 041556 106 FVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
++|++.+|..+|+.+|+.++..
T Consensus 87 ~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 87 FQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EECSSHHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999754
No 76
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.64 E-value=1.8e-06 Score=55.32 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=70.9
Q ss_pred cceEEEEEeeCC----CCCCeeeEEEEEECCeEEEEccCCC--CCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC
Q 041556 27 PERSGWLTKQGD----YIKTWRRRWFILKQGKLFWFKDSHN--ITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG 100 (143)
Q Consensus 27 ~~~~G~L~k~~~----~~~~w~~r~~vL~~~~l~~y~~~~~--~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~ 100 (143)
.++.+-|+.... ..++-+.|+|+|.++.|.|-+.... ....-.....++|.|..+.....+ .-+|+|.|...
T Consensus 13 lvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e--~~p~~~~l~s~ 90 (140)
T 3qwm_A 13 LVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ--YYPNGIRLTSS 90 (140)
T ss_dssp EEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS--SCTTEEEEEEC
T ss_pred EEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC--CCceEEEEEec
Confidence 355666655322 2235689999999999988862221 112344667899999755444333 47999999875
Q ss_pred C------eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 101 E------YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 101 ~------~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
. ..+.|+|.|+.|+..|+.+|+.+|+.-
T Consensus 91 ~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~ 124 (140)
T 3qwm_A 91 VPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV 124 (140)
T ss_dssp CTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 2 668999999999999999999998754
No 77
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.58 E-value=1.5e-07 Score=65.57 Aligned_cols=47 Identities=26% Similarity=0.746 Sum_probs=38.4
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEe
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIP 75 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~ 75 (143)
..|.++|||.++|+..+.|++|||||+++.+.||+... .....|.+.
T Consensus 19 ~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~----~~~k~G~L~ 65 (228)
T 3tfm_A 19 GSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQ----EALKQGWLH 65 (228)
T ss_dssp --CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCC----CSSEEEEEE
T ss_pred CCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCC----CcceEEEEE
Confidence 45789999999999999999999999999999999877 444444443
No 78
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.52 E-value=6.9e-07 Score=67.50 Aligned_cols=97 Identities=20% Similarity=0.325 Sum_probs=69.1
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEE
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMY 105 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~ 105 (143)
..+++|.|.+..+. .++.||++|.++.|.+-+.... ..-.....|+|.++.+.+...+ ..++.|.|.++.+.|.
T Consensus 243 ~li~~g~l~~~~~~--~~~~r~~fLF~d~Ll~~k~~~~--~~y~~k~~i~L~~l~v~~~~~~--~~~~~f~i~~~~~~~~ 316 (434)
T 3mpx_A 243 EFLKEGTLMKVTGK--NRRPRHLFLMNDVLLYTYPQKD--GKYRLKNTLAVANMKVSRPVME--KVPYALKIETSESCLM 316 (434)
T ss_dssp CEEECCEEEEEETT--EEEEEEEEEESSEEEEEEECTT--SCEEEEEEEEC-----CCCCCT--TSCSEEEEECSSCEEE
T ss_pred ceEecceEEEEeCC--CceEEEEEEECCEEEEEEecCC--CeEEEEEEEEcCCcEEEecCCC--CCCeeEEEecCCeEEE
Confidence 34789999876543 5789999999999999886541 1223457888988644333222 5689999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhh
Q 041556 106 FVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 106 ~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
|+|.|.++++.|+.+|+.++...
T Consensus 317 l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 317 LSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp EECSSHHHHHHHHHHHHHC----
T ss_pred EecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 79
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.46 E-value=6.9e-06 Score=62.63 Aligned_cols=107 Identities=19% Similarity=0.185 Sum_probs=77.4
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-----CCCCceEEEEe
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-----LNKPFAFELST 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-----~~~~~~f~i~~ 99 (143)
...+++|.|.+.....+..+.|+++|.++.|.+-+...........++.|+|.++.+.+..+.. ...++.|.|..
T Consensus 332 r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~ 411 (466)
T 2pz1_A 332 SELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHR 411 (466)
T ss_dssp SCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEEC
T ss_pred ceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEe
Confidence 4568899998876533467899999999999888765311111234578899987554433321 12368999986
Q ss_pred C--CeEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 100 G--EYTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 100 ~--~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
. ...+.|+|.|.+++..|+.+|+.++......
T Consensus 412 ~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 412 GATGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp SSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 5 5689999999999999999999998875443
No 80
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=98.38 E-value=1.1e-05 Score=60.58 Aligned_cols=105 Identities=16% Similarity=0.090 Sum_probs=75.1
Q ss_pred ccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc-----CCCCceEEEE
Q 041556 24 WSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-----LNKPFAFELS 98 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~-----~~~~~~f~i~ 98 (143)
....+++|.|.+.....+..+.|+++|.++.|.+-+...........++.|+|.++.+.+..+.. ...++.|.|.
T Consensus 254 ~r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~ 333 (402)
T 2dfk_A 254 SSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLH 333 (402)
T ss_dssp CCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEE
T ss_pred ccceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEE
Confidence 34568899998876533467899999999999888765311111234568889887554433221 1136899998
Q ss_pred eC--CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 99 TG--EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 99 ~~--~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.. ...+.|+|.|.++...|+.+|+.++...
T Consensus 334 ~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~ 365 (402)
T 2dfk_A 334 NKETEEVHLFFAKKLEEKIRWLRAFREERKMV 365 (402)
T ss_dssp ESSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 75 5689999999999999999999987654
No 81
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=98.34 E-value=8.4e-06 Score=60.00 Aligned_cols=98 Identities=17% Similarity=0.221 Sum_probs=72.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC-------CCCCccEEEeCCCeEEeecCcccCCCCceEEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT-------PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL 97 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~-------~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i 97 (143)
...+++|.|.+.+ .++.|+++|.++.|.+-+...... ..-..++.|+|..+.+.+..+ ....++.|.|
T Consensus 245 r~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d-~~~~~~~F~i 319 (354)
T 1dbh_A 245 NEFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDD-TNEYKHAFEI 319 (354)
T ss_dssp CCEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCC-SSSCCSEEEE
T ss_pred ceEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCc-ccccCccEEE
Confidence 4457899998874 568899999999998887653100 011134688999875544332 2245899999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 98 STGE-YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 98 ~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
...+ ..|.|+|.|.+++..|+.+|+.+...
T Consensus 320 ~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 320 ILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp CCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 8774 78999999999999999999988764
No 82
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.33 E-value=1.4e-05 Score=59.93 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=74.8
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc---CCCCceEEEEe--
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL---LNKPFAFELST-- 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~---~~~~~~f~i~~-- 99 (143)
...+++|.|.......+..+.++++|.++.|.+-+.... .-..+..|+|..+.+.+..... ...++.|.|..
T Consensus 232 grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~---~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~ 308 (406)
T 2vrw_B 232 GRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD---SYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQ 308 (406)
T ss_dssp CSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT---EEEEEEEEETTTEEEEC--------CTTCEEEEEEETT
T ss_pred CcccccccEEEEecCCCccceEEEEecCCEEEEEEecCC---ceEEEEEecccceeeeecCCCCccCCccceeeEEEecC
Confidence 446789999887544456799999999999988876541 2234568889987544333211 13468999986
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcC
Q 041556 100 GEYTMYFVADTEKEKEEWINSIGRAIVQHSR 130 (143)
Q Consensus 100 ~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 130 (143)
+...|.|+|.|.++++.|+.+|+.++.....
T Consensus 309 ~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 339 (406)
T 2vrw_B 309 GAQGYELFFKTRELKKKWMEQFEMAISNIYP 339 (406)
T ss_dssp CSCEEEEEESSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHHhhhhh
Confidence 3578999999999999999999999987653
No 83
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=98.31 E-value=1e-05 Score=54.57 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=67.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCC--CC-CccEEEeCCCeEEeecCcccCCCCceEEEEeC-
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITP--GS-TPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG- 100 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~--~~-~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~- 100 (143)
...+++|.|..+... +.++.+|++|.+..|.+-....+... .. ....++.|.++.+.+.+. ..+..|.|...
T Consensus 69 R~Ll~eG~L~~k~~~-~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~---d~~~~fli~~~~ 144 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA-GRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAH---EEKGLFLISMGM 144 (185)
T ss_dssp SCEEEEEEEEEECTT-CCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSS---CSSEEEEECCSS
T ss_pred CceeeeceEEEeccC-CCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCC---CCCeEEEEEecC
Confidence 356789999855432 27899999999988877654331000 00 023568888875544333 23444444432
Q ss_pred --CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 101 --EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 101 --~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
.+.|.|.|.|..+++.|+.+|+.|+....
T Consensus 145 ~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 145 TDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp SCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999988764
No 84
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=98.30 E-value=1e-05 Score=65.22 Aligned_cols=97 Identities=24% Similarity=0.394 Sum_probs=70.8
Q ss_pred cceEEEEEeeCC-C-CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCC---
Q 041556 27 PERSGWLTKQGD-Y-IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGE--- 101 (143)
Q Consensus 27 ~~~~G~L~k~~~-~-~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~--- 101 (143)
++..|||..... . ..+-+..||||+...|.||++.+ .+..+.+++|++............+++.|.|..++
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRN 615 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTT----CCCEEEEEECTTEEEEEC-------CEEEEEEETTSSC
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchh----hhcccccccccccccchhhhccccccccccccCCcccc
Confidence 788999998543 2 24678999999999999999988 56678899998864443334445678999998763
Q ss_pred -----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 102 -----YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 102 -----~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
+.+-|+|+++++...|..++-+|...
T Consensus 616 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 646 (772)
T 3zvr_A 616 VYKDYRQLELACETQEEVDSWKASFLRAGVY 646 (772)
T ss_dssp SBTTBSEEEEEESSHHHHHHHHHHHHHTTCC
T ss_pred ccchhhhhhhhccccccchhhHHhhhhcccC
Confidence 35679999999999999999665443
No 85
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.26 E-value=2e-05 Score=61.89 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=77.0
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc---cCCCCceEEEEeCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED---LLNKPFAFELSTGE 101 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~---~~~~~~~f~i~~~~ 101 (143)
...+++|.|.......+..+.|+++|.++.|.+-+.... .-..+..|+|..+.+.+.... ....++.|.|....
T Consensus 404 grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~---~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~ 480 (587)
T 3ky9_A 404 GRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD---SYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQ 480 (587)
T ss_dssp CCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT---EEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETT
T ss_pred CceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC---EEEeeeeechhhceeeecCCCCcccccccceeEEEEcC
Confidence 446789999887655567899999999999988876541 234567899998755544322 12356899998764
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 102 --YTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 102 --~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
..|.|+|.|.+++..|+.+|+.++......
T Consensus 481 ~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~~~ 512 (587)
T 3ky9_A 481 GAQGYELFFKTRELKKKWMEQFEMAISNIYPE 512 (587)
T ss_dssp C---CEEEESSHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHHhhhhccc
Confidence 789999999999999999999999876543
No 86
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=98.19 E-value=5.5e-05 Score=55.73 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=71.1
Q ss_pred ccccceEEEEEeeCC---C--------CCCeeeEEEEEECCeEEEEccCCCCCC------CCCccEEEeCCCeEEeecCc
Q 041556 24 WSNPERSGWLTKQGD---Y--------IKTWRRRWFILKQGKLFWFKDSHNITP------GSTPRGVIPVGTCLTVRGAE 86 (143)
Q Consensus 24 ~~~~~~~G~L~k~~~---~--------~~~w~~r~~vL~~~~l~~y~~~~~~~~------~~~~~~~i~L~~~~~~~~~~ 86 (143)
....+++|.+..... + ....+.|+++|.++.|.+-+....... .-..+..|+|..+.+.+...
T Consensus 207 ~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~ 286 (353)
T 1kz7_A 207 LGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK 286 (353)
T ss_dssp GCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT
T ss_pred hhhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC
Confidence 345678999876421 1 114689999999999988876541100 01124567787764443322
Q ss_pred ccCCCCceEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 87 DLLNKPFAFELSTG--EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 87 ~~~~~~~~f~i~~~--~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+.++.|.|... ...|.|+|.|.++++.|+.+|+.++....
T Consensus 287 ---~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 328 (353)
T 1kz7_A 287 ---GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQL 328 (353)
T ss_dssp ---TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999764 57899999999999999999999877653
No 87
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.16 E-value=3e-05 Score=49.30 Aligned_cols=98 Identities=16% Similarity=0.289 Sum_probs=62.6
Q ss_pred eEE-EEEeeCCCCCCeeeEEEEEEC-CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc---------cCCCCceEEE
Q 041556 29 RSG-WLTKQGDYIKTWRRRWFILKQ-GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED---------LLNKPFAFEL 97 (143)
Q Consensus 29 ~~G-~L~k~~~~~~~w~~r~~vL~~-~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~---------~~~~~~~f~i 97 (143)
..| .|.|.+.. +.-+.|+|+|.. ..++||.+.. .......+.|+|+.+..|..... ......+|+|
T Consensus 14 ~~Gt~l~K~~~~-~~~k~r~f~l~~~~~~~w~~s~~--~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsI 90 (131)
T 1mai_A 14 LKGSQLLKVKSS-SWRRERFYKLQEDCKTIWQESRK--VMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSI 90 (131)
T ss_dssp HHCEEEEEESSS-SCEEEEEEEECTTSSEEEECCCC--TTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEE
T ss_pred HcCCeEEEECCC-CcceeEEEEECCCCCEEEeCCcC--CCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEE
Confidence 344 44454432 123678888875 4555664321 01233677899988755554431 1235689999
Q ss_pred EeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 98 STGE--YTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 98 ~~~~--~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
+..+ ++++|.|+|.++++.|+.+|+..+....
T Consensus 91 iy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 91 VFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp EESSSCCCEEEECSSHHHHHHHHHHHHHHHC---
T ss_pred EECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 8876 5899999999999999999988776543
No 88
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=98.14 E-value=4.5e-05 Score=57.32 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=70.0
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC--------------CCCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT--------------PGSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~--------------~~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
...+++|.|.+... .+.++.++++|.++.|.+-+...... ........|.|.++.+.+.. .
T Consensus 293 r~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~----~ 367 (418)
T 3t06_A 293 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA----T 367 (418)
T ss_dssp SCEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS----S
T ss_pred ceeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc----c
Confidence 44678999987653 23578999999999998887543110 00112357888886443322 3
Q ss_pred CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 91 KPFAFELSTG-----EYTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 91 ~~~~f~i~~~-----~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
....|.|... ...|.|+|.|.++++.|+.+|+.+++.+...
T Consensus 368 ~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~~ 413 (418)
T 3t06_A 368 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHHH 413 (418)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC---
T ss_pred cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCccc
Confidence 4567777653 3789999999999999999999999877544
No 89
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=98.13 E-value=9.1e-05 Score=54.67 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=68.2
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCC--------------CCCCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNI--------------TPGSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~--------------~~~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
...+++|.|..... .+.++.++++|.++.|.+-+...+. .......+.|+|.++.+.+.. .
T Consensus 251 R~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~----~ 325 (368)
T 1xcg_A 251 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA----T 325 (368)
T ss_dssp SCEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS----S
T ss_pred ceEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeeccc----C
Confidence 34678999986533 2467899999999999888764310 000112457888876433322 3
Q ss_pred CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 91 KPFAFELSTG-----EYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 91 ~~~~f~i~~~-----~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
.++.|.|... ...|.|+|.|.++++.|+.+|+.++..
T Consensus 326 ~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 326 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4677777643 478999999999999999999999864
No 90
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=98.13 E-value=7.7e-05 Score=53.92 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=70.3
Q ss_pred cccceEEEEEeeCC--CCCCeeeEEEEEECCeEEEEccCCCCCC--CCCccEEEeCCCeEEeecCcccCCCCceEEEEe-
Q 041556 25 SNPERSGWLTKQGD--YIKTWRRRWFILKQGKLFWFKDSHNITP--GSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST- 99 (143)
Q Consensus 25 ~~~~~~G~L~k~~~--~~~~w~~r~~vL~~~~l~~y~~~~~~~~--~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~- 99 (143)
...+..|.+....+ ..+..+.|+++|.++.|.+-+....... .-..++.++|..+.+.+..+ +.++.|.|..
T Consensus 201 g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~---~~~~~F~i~~~ 277 (311)
T 1nty_A 201 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE---GDPCKFALWVG 277 (311)
T ss_dssp CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT---TCTTEEEEEES
T ss_pred CCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccC---CCCceEEEEeC
Confidence 44567787766532 2346789999999999988776431000 01234577888875443332 4578899976
Q ss_pred ----CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 100 ----GEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 100 ----~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+...+.|+|.|++++..|+.+|+.++...
T Consensus 278 ~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 278 RTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp SSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 24678999999999999999999998764
No 91
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=98.04 E-value=9.8e-05 Score=54.65 Aligned_cols=101 Identities=17% Similarity=0.118 Sum_probs=68.1
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCC--------------CCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITP--------------GSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~--------------~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
...+++|.|...... +.++.|+++|.++.|.+-+....... .......++|....+.+... .
T Consensus 257 r~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~---~ 332 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT---D 332 (377)
T ss_dssp SCEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTT---C
T ss_pred ceEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhcccccc---c
Confidence 346789999776542 37899999999999988875432000 00112368888764433222 2
Q ss_pred CCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 91 KPFAFELST---GEYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 91 ~~~~f~i~~---~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
....|.+.. +...|.|.|.|.++++.|+.+|++++....
T Consensus 333 ~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~k 374 (377)
T 3p6a_A 333 HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 374 (377)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTCC
T ss_pred cceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 344555544 356788999999999999999999988654
No 92
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.97 E-value=0.00017 Score=53.56 Aligned_cols=101 Identities=20% Similarity=0.157 Sum_probs=68.5
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCC--------------CCCCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNI--------------TPGSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~--------------~~~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
...+++|.|...... ...+.++++|.++.|.+-+...+. .......+.|+|.++.+.+... .
T Consensus 255 R~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~---d 330 (385)
T 1txd_A 255 RKMIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT---D 330 (385)
T ss_dssp SCEEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC----
T ss_pred ceEEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccccccccc---C
Confidence 346789999865432 357899999999998887654310 0011234678888864433222 2
Q ss_pred CCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q 041556 91 KPFAFELSTG---EYTMYFVADTEKEKEEWINSIGRAIVQHS 129 (143)
Q Consensus 91 ~~~~f~i~~~---~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 129 (143)
.++.|.|... ...|.|+|.|.++++.|+.+|+.++....
T Consensus 331 ~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 331 NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 3466666542 46799999999999999999999987764
No 93
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.95 E-value=0.00015 Score=56.37 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=67.2
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCC--------------CCCccEEEeCCCeEEeecCcccCC
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITP--------------GSTPRGVIPVGTCLTVRGAEDLLN 90 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~--------------~~~~~~~i~L~~~~~~~~~~~~~~ 90 (143)
...+++|.|...... ..++.++++|.++.|.+.+....... .......|+|.++.+.+... .
T Consensus 410 R~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~---d 485 (536)
T 3odw_A 410 KKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT---D 485 (536)
T ss_dssp SCEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTT---C
T ss_pred ceeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccc---c
Confidence 346789999876542 36789999999999988875432000 00112368888864443222 2
Q ss_pred CCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcCC
Q 041556 91 KPFAFELST---GEYTMYFVADTEKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 91 ~~~~f~i~~---~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 131 (143)
....|.|.. +...|.|+|.|.+|++.|+.+|++++......
T Consensus 486 ~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~~ 529 (536)
T 3odw_A 486 HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVP 529 (536)
T ss_dssp TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCCc
Confidence 233444443 35779999999999999999999999876443
No 94
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.95 E-value=1.1e-06 Score=67.54 Aligned_cols=97 Identities=21% Similarity=0.156 Sum_probs=0.0
Q ss_pred cceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC--CCC-------------CccEEEeCCCeEEeecCcccCCC
Q 041556 27 PERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT--PGS-------------TPRGVIPVGTCLTVRGAEDLLNK 91 (143)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~--~~~-------------~~~~~i~L~~~~~~~~~~~~~~~ 91 (143)
.+++|.|.+. +.++.++++|.++.|.+.+..+... .+. ..+..|+|.+..+ ....+....
T Consensus 253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v-~~~~d~~~~ 327 (510)
T 3jzy_A 253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLV-KLPTDPSSD 327 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEE-eccCCCCcc
Confidence 4567777654 2468999999999998877544110 000 1134567777533 333232356
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 92 PFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 92 ~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+++|.|....+.|.|+|.|.+++..|+.+|++++...
T Consensus 328 ~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 328 EPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp -------------------------------------
T ss_pred ccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 8999999988999999999999999999999988765
No 95
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.94 E-value=7.8e-05 Score=54.63 Aligned_cols=93 Identities=19% Similarity=0.099 Sum_probs=64.6
Q ss_pred ccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCCCCC----CccEEEeCCCeEEeecCccc-------------
Q 041556 26 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGS----TPRGVIPVGTCLTVRGAEDL------------- 88 (143)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~~~~----~~~~~i~L~~~~~~~~~~~~------------- 88 (143)
..+++|.|.+..+ +.++++|.++.|.+-+..... +. ..+..|+|..+.+.+..+..
T Consensus 231 ~li~~G~l~~~~~-----~~~~~fLF~d~Ll~~k~~~~~--~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~ 303 (346)
T 2z0q_A 231 VLCCHGELKNNRG-----VKLHVFLFQEVLVITRAVTHN--EQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSN 303 (346)
T ss_dssp CEEEEEEEEETTS-----CEEEEEEESSEEEEEEEEEET--TEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSH
T ss_pred EEEEeceeEECCC-----cEEEEEECCCcEEEEEEeccC--CceeeeeecCCcchhhceeeecCCCccccCccccccccC
Confidence 3467899876322 789999999999888764310 11 12456788876444333210
Q ss_pred -CCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 041556 89 -LNKPFAFELST----GEYTMYFVADTEKEKEEWINSIGRAI 125 (143)
Q Consensus 89 -~~~~~~f~i~~----~~~~~~~~a~s~~e~~~Wi~al~~~~ 125 (143)
...++.|.|.. .+..|.|+|.|.++.+.|+.+|+.|+
T Consensus 304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 02368999974 36789999999999999999999886
No 96
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.87 E-value=0.0004 Score=51.08 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=68.4
Q ss_pred cccceEEEEEeeCC-----CCCCeeeEEEEEECCeEEEEccCCCCC-----CCCCccEEEeCCCeEEeecCcccCCCCce
Q 041556 25 SNPERSGWLTKQGD-----YIKTWRRRWFILKQGKLFWFKDSHNIT-----PGSTPRGVIPVGTCLTVRGAEDLLNKPFA 94 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-----~~~~w~~r~~vL~~~~l~~y~~~~~~~-----~~~~~~~~i~L~~~~~~~~~~~~~~~~~~ 94 (143)
...+..|.+....+ .....+.|+++|.++.|.+-+...... ..-..+..|+|..+.+.+..+ +.++.
T Consensus 205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~---~~~~~ 281 (354)
T 2rgn_B 205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ---GDPCR 281 (354)
T ss_dssp CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG---GCTTE
T ss_pred ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC---CCCce
Confidence 44567787765432 123578999999999998877654100 011234577888764433322 35789
Q ss_pred EEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 95 FELSTG-----EYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 95 f~i~~~-----~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
|.|... ...|.|+|.|.++.+.|+.+|+.++...
T Consensus 282 F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 282 FALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp EEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 998752 3679999999999999999999987654
No 97
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.84 E-value=0.00019 Score=59.90 Aligned_cols=98 Identities=18% Similarity=0.242 Sum_probs=72.1
Q ss_pred cccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC-------CCCCccEEEeCCCeEEeecCcccCCCCceEEE
Q 041556 25 SNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT-------PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL 97 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~-------~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i 97 (143)
...+++|.|.+.+.. +.|+++|.++.|.+-+...... ..-..++.++|..+.+.+ ..+....++.|.|
T Consensus 442 r~Li~eG~l~~~~~k----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~-~~d~~~~~~~F~I 516 (1049)
T 3ksy_A 442 NEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQIND-KDDTNEYKHAFEI 516 (1049)
T ss_dssp SCCCCEEEEEETTCS----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCC-CCCSSSCCSEEEE
T ss_pred ceEEEeceEEEEccC----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEE-CCCCccccceEEE
Confidence 446789999887643 8999999999999988764210 012456788888864433 3332256899999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 98 STGE-YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 98 ~~~~-~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
...+ ..|.|+|.|.++++.|+.+|+.+...
T Consensus 517 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 517 ILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 8765 58999999999999999999877543
No 98
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=97.63 E-value=0.0027 Score=46.99 Aligned_cols=104 Identities=9% Similarity=0.014 Sum_probs=65.3
Q ss_pred cccceEEEEEeeCC-----CCCCeeeEEEEEECCeEEE-EccCCCC----C-----------CCCCccEEEeCCCeEEee
Q 041556 25 SNPERSGWLTKQGD-----YIKTWRRRWFILKQGKLFW-FKDSHNI----T-----------PGSTPRGVIPVGTCLTVR 83 (143)
Q Consensus 25 ~~~~~~G~L~k~~~-----~~~~w~~r~~vL~~~~l~~-y~~~~~~----~-----------~~~~~~~~i~L~~~~~~~ 83 (143)
...+..|.+..... ..+.-+.++++|.++.|.+ .+..... . ..-..+..|+|..+.+.+
T Consensus 236 g~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~ 315 (377)
T 1foe_A 236 GDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRA 315 (377)
T ss_dssp GGEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEEC
T ss_pred cceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEe
Confidence 44567787765421 1234568899999987655 4432100 0 011235688998875444
Q ss_pred cCcccCCCCceEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 84 GAEDLLNKPFAFELS--------TGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 84 ~~~~~~~~~~~f~i~--------~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
..+........|.|. .+.+.|.|+|.|.++...|+.+|.+++...
T Consensus 316 ~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~ 368 (377)
T 1foe_A 316 LPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK 368 (377)
T ss_dssp CCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHH
Confidence 333221223457775 235789999999999999999999998754
No 99
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=97.58 E-value=0.0023 Score=51.11 Aligned_cols=94 Identities=18% Similarity=0.420 Sum_probs=67.2
Q ss_pred cccceEEEEEeeCCC-CCCeeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeC-Ce
Q 041556 25 SNPERSGWLTKQGDY-IKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTG-EY 102 (143)
Q Consensus 25 ~~~~~~G~L~k~~~~-~~~w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~-~~ 102 (143)
..+++.|++.|+++. ...|++|++.|..+.+.+.... ..+...+.+.....+.... .+..++|.+... .+
T Consensus 557 ~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~------~~~~~l~~~~~v~~v~k~~--i~~~~~l~~~~k~~k 628 (689)
T 3v5w_A 557 KDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG------EAPQSLLTMEEIQSVEETQ--IKERKCLLLKIRGGK 628 (689)
T ss_dssp SCCCEEEEEEEC-------CEEEEEEEETTEEEEECTT------SCCCEEEEGGGEEEEEEEE--SSSCEEEEEEETTTE
T ss_pred CcceeecccccCCCcccchhhhhccccCCCcccccccC------CCCcceeeeccccccccCc--CCCCcceeeeecCCc
Confidence 457899999998764 4689999999999999887542 3455677777654443322 245678888765 67
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 103 TMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 103 ~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
.+++.+++..++.+|+.+|+.+-.
T Consensus 629 ~f~~~t~~~~~~~~W~~~i~~~~~ 652 (689)
T 3v5w_A 629 QFILQCDSDPELVQWKKELRDAYR 652 (689)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEECCChHHHHHHHHHHHHHHH
Confidence 899999999999999999987643
No 100
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=96.87 E-value=0.01 Score=36.89 Aligned_cols=103 Identities=11% Similarity=0.101 Sum_probs=70.6
Q ss_pred cccccccceEEEEEeeCCCCCCeeeEEEEEECCeEEEEccCCCCC-CCCCccEEEeCCCeEEeecCcccCCCCceEEEEe
Q 041556 21 IEFWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNIT-PGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST 99 (143)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~~~~w~~r~~vL~~~~l~~y~~~~~~~-~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~ 99 (143)
.......++.|.+....+. +.-+.|+++|....+.+-+...... ..-.-+..|.+..+...+...+ +.+..|.|-.
T Consensus 4 L~~~G~Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~--~d~~kFeiw~ 80 (119)
T 1fho_A 4 TGKLGRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD--EDTIVLQPQE 80 (119)
T ss_dssp CCCCCCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT--CCEEEEECCS
T ss_pred hHHcCCccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC--CCCcEEEEcc
Confidence 3445678899999887653 4568899999999999988762100 1123455888888644443331 3467788855
Q ss_pred CC--eEEEE--EcCCHH-HHHHHHHHHHHHHH
Q 041556 100 GE--YTMYF--VADTEK-EKEEWINSIGRAIV 126 (143)
Q Consensus 100 ~~--~~~~~--~a~s~~-e~~~Wi~al~~~~~ 126 (143)
.+ ..|.+ +|.|.+ ..+.|+..|+..+.
T Consensus 81 ~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~ 112 (119)
T 1fho_A 81 PGLPSFRIKPKDFETSEYVRKAWLRDIAEEQE 112 (119)
T ss_dssp TTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred CCCCceEEEeeecCCcHHHHHHHHHHHHHHHH
Confidence 43 45667 899999 99999999987433
No 101
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=96.70 E-value=0.014 Score=41.23 Aligned_cols=53 Identities=17% Similarity=0.330 Sum_probs=40.4
Q ss_pred EEEeCCCeEEeec--CcccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 72 GVIPVGTCLTVRG--AEDLLNKPFAFELSTGE--YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 72 ~~i~L~~~~~~~~--~~~~~~~~~~f~i~~~~--~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
..++|.-|.+... ..+ .+++.|.|..++ .+++|.|.+..++.+|+.+|+.++.
T Consensus 206 ~~ipL~m~~~tR~~~~~d--~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp EEEESSSEEEEEECCSSC--SSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccCcceeeeeeeccccC--CCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 5677776633322 223 478999999873 5689999999999999999998874
No 102
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.36 E-value=0.03 Score=37.21 Aligned_cols=53 Identities=17% Similarity=0.330 Sum_probs=40.6
Q ss_pred EEEeCCCeEEeec--CcccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 72 GVIPVGTCLTVRG--AEDLLNKPFAFELSTGE--YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 72 ~~i~L~~~~~~~~--~~~~~~~~~~f~i~~~~--~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
..|+|.=|.+... ..+ .+.+.|+|..++ .+.+|.|.+..++..|+.+|+..+.
T Consensus 121 ~~IPLkMayvtR~~~~tD--~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSC--CSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCC--CCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 5678876644322 222 478999999874 5689999999999999999998764
No 103
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.84 Score=29.99 Aligned_cols=84 Identities=17% Similarity=0.161 Sum_probs=60.5
Q ss_pred CeeeEEEEEE-----CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHHH
Q 041556 42 TWRRRWFILK-----QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEE 116 (143)
Q Consensus 42 ~w~~r~~vL~-----~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~~ 116 (143)
.=|.|+.+|. .+.+.+++.+......-....+.+|.....|+... .....|.|.. ++.|+..|++..|...
T Consensus 63 ~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~---~~~~gF~ltl-~K~Y~W~a~s~~Er~~ 138 (171)
T 3hie_A 63 NKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL---EISEGFILTM-SKKYYWETNSAKERTV 138 (171)
T ss_dssp GEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECS---SCTTEEEEES-SSEEEEECSSHHHHHH
T ss_pred CccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccC---CCCCcEEEEe-CCeEEEecCCHHHHHH
Confidence 4578887773 44678887766322222233477888766666533 2478888876 6999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 041556 117 WINSIGRAIVQHS 129 (143)
Q Consensus 117 Wi~al~~~~~~~~ 129 (143)
.|.+|-+....+.
T Consensus 139 FI~sL~K~y~ky~ 151 (171)
T 3hie_A 139 FIKSLITLYIQTF 151 (171)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHc
Confidence 9999998888775
No 104
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=90.38 E-value=1.5 Score=31.45 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=59.8
Q ss_pred CCeeeEEEEEE-----CCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 041556 41 KTWRRRWFILK-----QGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKE 115 (143)
Q Consensus 41 ~~w~~r~~vL~-----~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~a~s~~e~~ 115 (143)
+.=|.|+.+|. .+.+.+++.+.............+|.....|+..- .....|.|.. ++.||..|.+..|..
T Consensus 132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~---~~~~gF~LTl-~K~YyW~A~s~kER~ 207 (320)
T 3a58_A 132 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL---EISEGFILTM-SKKYYWETNSAKERT 207 (320)
T ss_dssp GGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECS---SCTTEEEEES-SSEEEEEESSHHHHH
T ss_pred cccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhccc---CCCCceEEEe-CCceEEecCCHHHHH
Confidence 34577887774 34588887765322122234477788766665321 3458888876 899999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 041556 116 EWINSIGRAIVQHS 129 (143)
Q Consensus 116 ~Wi~al~~~~~~~~ 129 (143)
.+|..|-+....+.
T Consensus 208 ~FI~sLvKiy~KYt 221 (320)
T 3a58_A 208 VFIKSLITLYIQTF 221 (320)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999998888775
No 105
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=89.09 E-value=7.4 Score=31.79 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=57.0
Q ss_pred ceEEE-EEeeCCCCCCeeeEEEEEEC--CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc----------------
Q 041556 28 ERSGW-LTKQGDYIKTWRRRWFILKQ--GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL---------------- 88 (143)
Q Consensus 28 ~~~G~-L~k~~~~~~~w~~r~~vL~~--~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~---------------- 88 (143)
+..|. |.|.......-+.++|.|.. ..|+|....+ ....+.|+.+..+......
T Consensus 17 L~~Gt~~~K~~~~~~~~k~~~frLd~d~~~l~W~~~~k-------~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~ 89 (799)
T 2zkm_X 17 LSQGERFIKWDDETTVASPVILRVDPKGYYLYWTYQSK-------EMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDF 89 (799)
T ss_dssp HHHCEEEEEECTTTCCEEEEEEEECTTSCEEEEEETTS-------CEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSS
T ss_pred HhCCCEEEEEcCCCcceeEEEEEEcCCCCEEEEccCCC-------cCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccC
Confidence 34454 44444321122677888864 3556654222 2458888776444432111
Q ss_pred ---CCCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 89 ---LNKPFAFELSTGE-----YTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 89 ---~~~~~~f~i~~~~-----~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
.....+|.|+... ..+.|.|.++++++.|+..|+..+...
T Consensus 90 ~~~~~e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 90 PDNSFLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp TTCCGGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred cccccccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 0124689998763 257899999999999999998776643
No 106
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=88.29 E-value=7.8 Score=31.76 Aligned_cols=94 Identities=11% Similarity=0.110 Sum_probs=58.0
Q ss_pred cceEE-EEEeeCCCCCCeeeEEEEEEC--CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCccc--------------C
Q 041556 27 PERSG-WLTKQGDYIKTWRRRWFILKQ--GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL--------------L 89 (143)
Q Consensus 27 ~~~~G-~L~k~~~~~~~w~~r~~vL~~--~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~~--------------~ 89 (143)
.+..| .|.|.+...+..+.+.|.|.. ..|+|....+ .....+.|+.+..+...... .
T Consensus 21 ~L~~G~~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~k------~~~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~ 94 (816)
T 3qr0_A 21 QLIKGDKFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGK------EDTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNF 94 (816)
T ss_dssp HHHHCEEEEEECTTCCCCEEEEEEECTTSCEEEECCTTC------SSCEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHS
T ss_pred HHhCCCeEEEECCCCCcceeEEEEEcCCCCEEEEeCCCC------CcCcEEEeeeeeeeecCCcCCCCccHHHHHHHHhc
Confidence 34445 555555543334678888874 4555644322 11367888865444333221 0
Q ss_pred C------CCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 041556 90 N------KPFAFELSTGE-----YTMYFVADTEKEKEEWINSIGRAIV 126 (143)
Q Consensus 90 ~------~~~~f~i~~~~-----~~~~~~a~s~~e~~~Wi~al~~~~~ 126 (143)
+ ...+|.|+... ..+.|.|.+.++++.|+..|+..+.
T Consensus 95 g~~~~~~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 95 GSSNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp SCTTSCHHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCcccccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 1 24689998763 2348999999999999999987654
No 107
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=87.40 E-value=5 Score=27.06 Aligned_cols=35 Identities=17% Similarity=0.385 Sum_probs=29.1
Q ss_pred ceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 93 FAFELSTG-EYTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 93 ~~f~i~~~-~~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
..|.|... +..+-|.|.|+.+...|++.|+.-+..
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg~ 151 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGK 151 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTTC
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhcC
Confidence 58888765 467889999999999999999766553
No 108
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=86.23 E-value=5.4 Score=33.00 Aligned_cols=94 Identities=11% Similarity=0.138 Sum_probs=55.9
Q ss_pred cceEEE-EEeeCCCCCCeeeEEEEEEC--CeEEEEccCCCCCCCCCccEEEeCCCeEEeecCcc----------------
Q 041556 27 PERSGW-LTKQGDYIKTWRRRWFILKQ--GKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAED---------------- 87 (143)
Q Consensus 27 ~~~~G~-L~k~~~~~~~w~~r~~vL~~--~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~~---------------- 87 (143)
.+..|- +.|.+.....-+.++|.|.. ..|+|.. +. .....+.|..+..+.....
T Consensus 20 ~L~~Gt~f~K~~~~~~~~k~~~frLD~d~~~L~W~~-~~------ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~ 92 (885)
T 3ohm_B 20 TLRRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTG-PN------MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFG 92 (885)
T ss_dssp HHHHCEEEEEECTTCCSCCEEEEEECTTSCEEEEEC-GG------GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC---
T ss_pred HHhCCCeEEEECCCCCCcEEEEEEECCCCCEEEEeC-CC------CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccC
Confidence 445554 44554432233667777763 3555543 22 1235677776544433221
Q ss_pred ---cCCCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 041556 88 ---LLNKPFAFELSTGE-----YTMYFVADTEKEKEEWINSIGRAIVQ 127 (143)
Q Consensus 88 ---~~~~~~~f~i~~~~-----~~~~~~a~s~~e~~~Wi~al~~~~~~ 127 (143)
......+|.|+... ..+.|.|.+.++++.|+..|+..+..
T Consensus 93 ~~~~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 93 GPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp ------CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred cccCcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 11235789998764 25889999999999999999876553
No 109
>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}
Probab=68.93 E-value=19 Score=22.65 Aligned_cols=82 Identities=15% Similarity=0.085 Sum_probs=47.5
Q ss_pred eeeEEEEEECCeEEEEccCCCCCCCCCccEEEeCCCeEEeecCc-cc-----CCCCceEEEEeCC-------eEEEEEcC
Q 041556 43 WRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAE-DL-----LNKPFAFELSTGE-------YTMYFVAD 109 (143)
Q Consensus 43 w~~r~~vL~~~~l~~y~~~~~~~~~~~~~~~i~L~~~~~~~~~~-~~-----~~~~~~f~i~~~~-------~~~~~~a~ 109 (143)
-...-|.|.++.-+++-+.. . ...|.|.....+.... +. ..+..+|.|.... ...+..++
T Consensus 34 ~e~~vCrLS~nhR~L~ldgd-----s--h~eIels~I~~vqiL~eg~~~ggg~~rasGm~l~Yk~~g~~~~~ql~lt~~~ 106 (141)
T 2rrf_A 34 PETMTCRLSNNQRYLFLDGD-----S--HYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVE 106 (141)
T ss_dssp CEEEEEEECTTSSEEEEESS-----S--EEEEETTTCCCEECCCCSSCSSSSSCCCSCCEEEECCTTSSSCEEEEEECCC
T ss_pred CceEEEEecCCeeEEEEcCC-----C--CCcEEeeeeeEEEEeccCCCCCCCcceeeEEEEEeeCCCccceeEEEEeecc
Confidence 45566777655333333322 2 5777787754443321 11 2367888886541 12334455
Q ss_pred C----HHHHHHHHHHHHHHHHhhcCC
Q 041556 110 T----EKEKEEWINSIGRAIVQHSRS 131 (143)
Q Consensus 110 s----~~e~~~Wi~al~~~~~~~~~~ 131 (143)
+ ....-.||.||++++.-...+
T Consensus 107 d~~~~kk~s~aWlaAm~KA~KllyEs 132 (141)
T 2rrf_A 107 DVTVGRRQAVAWLVAMHKAAKLLYES 132 (141)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHh
Confidence 5 668888999999998765433
No 110
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=65.54 E-value=21 Score=21.95 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=53.9
Q ss_pred eeeEEEEEECCeEEEEccCCCC-CCCCCccEEEeCCCeEEeecCcccCCCCceEEEEe----C--CeEEEEEcCCHHHHH
Q 041556 43 WRRRWFILKQGKLFWFKDSHNI-TPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST----G--EYTMYFVADTEKEKE 115 (143)
Q Consensus 43 w~~r~~vL~~~~l~~y~~~~~~-~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~----~--~~~~~~~a~s~~e~~ 115 (143)
-..|-+.+.|..+.+-...... ..+.....++.++....+... ...|..|.|+- . .+.|.|-|.+.+|..
T Consensus 27 ~~ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K~s---~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~ 103 (121)
T 3ulb_A 27 KHERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVKKS---KRVPEHFKIFVRREGQDDIKRYYFEAVSGQECT 103 (121)
T ss_dssp EEEEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEEEC---SSCTTEEEEEECCTTCSSCEEEEEEESSHHHHH
T ss_pred cccEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEEec---ccCCCcEEEEEEccCCCCcceeEEEeCCHHHHH
Confidence 3566677778877765543310 001234457777765444433 25677888753 2 378999999999999
Q ss_pred HHHHHHHHHHHhh
Q 041556 116 EWINSIGRAIVQH 128 (143)
Q Consensus 116 ~Wi~al~~~~~~~ 128 (143)
+-+..|+..+..+
T Consensus 104 EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 104 EIVTRLQNLLSAY 116 (121)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887765
No 111
>3u12_A USP37 protein; structural genomics, PH-domain, hydrolase, structural genomi consortium, SGC; 2.08A {Homo sapiens}
Probab=37.72 E-value=76 Score=19.98 Aligned_cols=90 Identities=9% Similarity=0.141 Sum_probs=57.2
Q ss_pred ccceEEEEEeeCC--CCCCeeeEEEEEEC--C--e-EEEEccCCCCCCCCCccEEEeCCC-eE-EeecCcccCCCCceEE
Q 041556 26 NPERSGWLTKQGD--YIKTWRRRWFILKQ--G--K-LFWFKDSHNITPGSTPRGVIPVGT-CL-TVRGAEDLLNKPFAFE 96 (143)
Q Consensus 26 ~~~~~G~L~k~~~--~~~~w~~r~~vL~~--~--~-l~~y~~~~~~~~~~~~~~~i~L~~-~~-~~~~~~~~~~~~~~f~ 96 (143)
.....|++..+.. ++..|++-++.... . . +.+|...+ ...++.|.. .. ++..+ +..+.+.+.
T Consensus 19 ~l~ihG~Vqiws~~tGmSK~KEa~iE~VE~kkkv~LVv~F~~G~-------~~ktFQL~nNIksVvlr~--~g~~qn~Lh 89 (141)
T 3u12_A 19 SLKIHGPIRIRSMQTGITKWKEGSFEIVEKENKVSLVVHYNTGG-------IPRIFQLSHNIKNVVLRP--SGAKQSRLM 89 (141)
T ss_dssp CCEEEEEEEEEETTTEECCCEEEEEEEEEETTEEEEEEEETTCS-------CCEEEECTTTEEEEEEEE--CSTTEEEEE
T ss_pred cceeceeEEEEecCCCcccchheeeeeeeccceEEEEEEEeCCC-------ccEEEEcccceeeEEEec--CCCccceEE
Confidence 3456788887643 56789999987742 2 3 44555433 346788875 32 22222 236788999
Q ss_pred EEeCCeEEE----EEcCCHHHHHHHHHHHHHH
Q 041556 97 LSTGEYTMY----FVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 97 i~~~~~~~~----~~a~s~~e~~~Wi~al~~~ 124 (143)
|+-.+..+. +...+.++++.-++.+.+.
T Consensus 90 LTlknn~fLfIdKLs~~DaeqLK~FLd~v~Qn 121 (141)
T 3u12_A 90 LTLQDNSFLSIDKVPSKDAEEMRLFLDAVHQN 121 (141)
T ss_dssp EEETTCCEEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred EEEecCcEEEEecCCHHHHHHHHHHHHHhccc
Confidence 988766543 5567777888888887543
No 112
>2kdu_B MUNC13-1, protein UNC-13 homolog A; calmodulin, calcium, acetylation, methylation, alternative splicing, cell junction, cell membrane, coiled coil; NMR {Xenopus laevis}
Probab=22.23 E-value=75 Score=14.98 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHhhc
Q 041556 113 EKEEWINSIGRAIVQHS 129 (143)
Q Consensus 113 e~~~Wi~al~~~~~~~~ 129 (143)
....||.|+.++..+..
T Consensus 4 Ak~~Wlra~nKVR~qlq 20 (36)
T 2kdu_B 4 AKANWLRAFNKVRMQLQ 20 (36)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45689999999877664
No 113
>4emo_A Sharpin; pleckstrin homology (PH) domain, lubac, SIPL1, linear ubiqui HOIL-1L, HOIP, protein binding; 2.00A {Homo sapiens}
Probab=22.13 E-value=1.4e+02 Score=18.18 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=22.0
Q ss_pred CceEEEEe--C-CeEEEEEcCCHHHHHHHHHHHHHH
Q 041556 92 PFAFELST--G-EYTMYFVADTEKEKEEWINSIGRA 124 (143)
Q Consensus 92 ~~~f~i~~--~-~~~~~~~a~s~~e~~~Wi~al~~~ 124 (143)
+.+..+.. + -..+.|..-+.+|.++|-...+.+
T Consensus 86 P~~hELqpp~~gpg~lsl~F~~~qeAQrWA~lv~~a 121 (129)
T 4emo_A 86 PTQHELQPPPGGPGTLSMHFLNPQEAQRWAVLVRGA 121 (129)
T ss_dssp TTEEEEECCTTSSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCCeEEEeeCCHHHHHHHHHHHHhh
Confidence 34444443 2 356778888999999996666544
No 114
>2x5r_A Hypothetical protein ORF126; unknown function, viral protein; 2.00A {Pyrobaculum spherical virus}
Probab=21.86 E-value=70 Score=18.51 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=22.7
Q ss_pred CCCceEEEE-eCCeEEEEE--cCCHHHHHHHHHHH
Q 041556 90 NKPFAFELS-TGEYTMYFV--ADTEKEKEEWINSI 121 (143)
Q Consensus 90 ~~~~~f~i~-~~~~~~~~~--a~s~~e~~~Wi~al 121 (143)
..++.|.+. -.+.+||+- |+..+.+-.|+.||
T Consensus 88 ngknhfrvvairngtyyldavcdkcepritwlsai 122 (127)
T 2x5r_A 88 NGKNHFRVVAIRNGTYYLDAVCDKCEPRITWLSAI 122 (127)
T ss_dssp CSSSCEEEEEETTTTEEEEEEETTTCTTHHHHHHH
T ss_pred cCCCcEEEEEEecCcEEeeeeccccccceeEEEEE
Confidence 345667664 456677765 67778888999997
No 115
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=21.50 E-value=1.1e+02 Score=16.60 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=30.7
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q 041556 92 PFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQH 128 (143)
Q Consensus 92 ~~~f~i~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 128 (143)
+-...|...++...+...|..++..+|.-|+..+...
T Consensus 21 ~~~vsV~ydgr~V~Y~~asi~~L~~~I~~le~~Lg~~ 57 (68)
T 1hyw_A 21 KRVATVQKDGRRVEFTATSVSDLKKYIAELEVQTGMT 57 (68)
T ss_dssp CCCEEEECSSCEEEECTTTHHHHHHHHHHHHHHTTTT
T ss_pred CceEEEEECCEEEEEecCCHHHHHHHHHHHHHHhccc
Confidence 3456666678999999999999999999999887664
Done!