Query 041557
Match_columns 189
No_of_seqs 209 out of 2083
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:05:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041557.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041557hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yvv_A Amine oxidase, flavin-c 99.6 1.9E-14 6.4E-19 120.1 13.6 118 63-186 2-147 (336)
2 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 1.6E-14 5.5E-19 121.7 11.9 121 64-186 2-151 (342)
3 3kkj_A Amine oxidase, flavin-c 99.5 1.9E-13 6.5E-18 106.3 13.7 74 63-139 2-75 (336)
4 2vdc_G Glutamate synthase [NAD 99.3 3.8E-13 1.3E-17 118.9 3.2 98 5-103 55-161 (456)
5 4gde_A UDP-galactopyranose mut 99.3 4.4E-12 1.5E-16 111.5 6.6 72 62-135 9-81 (513)
6 4a9w_A Monooxygenase; baeyer-v 99.2 6.5E-11 2.2E-15 98.5 10.0 105 63-184 3-117 (357)
7 4dgk_A Phytoene dehydrogenase; 99.2 1.4E-11 4.6E-16 108.5 5.5 55 64-121 2-56 (501)
8 2ivd_A PPO, PPOX, protoporphyr 99.2 4.1E-11 1.4E-15 104.8 7.8 75 59-136 12-86 (478)
9 3v76_A Flavoprotein; structura 99.2 1.3E-10 4.6E-15 101.5 10.9 117 61-184 25-172 (417)
10 2b9w_A Putative aminooxidase; 99.1 8.1E-11 2.8E-15 101.4 8.1 59 62-123 5-64 (424)
11 3lzw_A Ferredoxin--NADP reduct 99.1 9.5E-11 3.2E-15 96.9 7.9 102 63-185 7-109 (332)
12 2zbw_A Thioredoxin reductase; 99.1 2.4E-10 8.1E-15 95.1 9.0 103 63-186 5-107 (335)
13 1s3e_A Amine oxidase [flavin-c 99.1 1.7E-10 5.9E-15 102.4 8.2 70 63-134 4-73 (520)
14 2e1m_A L-glutamate oxidase; L- 99.1 5.5E-10 1.9E-14 96.7 11.1 75 61-135 42-124 (376)
15 1w4x_A Phenylacetone monooxyge 99.1 2.2E-10 7.6E-15 102.8 8.8 120 62-187 15-141 (542)
16 2vvm_A Monoamine oxidase N; FA 99.1 1.2E-10 4.2E-15 102.4 6.8 64 64-130 40-103 (495)
17 4ap3_A Steroid monooxygenase; 99.1 2.6E-10 8.9E-15 102.9 8.9 121 62-187 20-146 (549)
18 1sez_A Protoporphyrinogen oxid 99.1 2E-10 6.8E-15 101.2 7.7 60 62-124 12-71 (504)
19 3i6d_A Protoporphyrinogen oxid 99.1 1.4E-10 4.9E-15 100.5 6.5 71 63-136 5-81 (470)
20 3gwf_A Cyclohexanone monooxyge 99.1 2.9E-10 9.8E-15 102.4 8.7 120 63-187 8-134 (540)
21 1rsg_A FMS1 protein; FAD bindi 99.1 2.2E-10 7.4E-15 101.9 7.1 59 63-124 8-68 (516)
22 1v0j_A UDP-galactopyranose mut 99.1 3.9E-10 1.3E-14 97.6 8.5 73 62-135 6-80 (399)
23 3ab1_A Ferredoxin--NADP reduct 99.0 4.9E-10 1.7E-14 94.5 8.6 104 62-186 13-117 (360)
24 2gqf_A Hypothetical protein HI 99.0 1.1E-09 3.8E-14 95.0 10.8 39 63-102 4-42 (401)
25 3rp8_A Flavoprotein monooxygen 99.0 1.2E-09 4E-14 93.9 10.1 38 62-100 22-59 (407)
26 3f8d_A Thioredoxin reductase ( 99.0 9.2E-10 3.2E-14 90.4 9.1 97 63-187 15-112 (323)
27 3itj_A Thioredoxin reductase 1 99.0 5.9E-10 2E-14 92.3 7.9 96 62-181 21-120 (338)
28 3uox_A Otemo; baeyer-villiger 99.0 3.9E-10 1.3E-14 101.7 7.3 120 62-187 8-134 (545)
29 3nrn_A Uncharacterized protein 99.0 6.9E-10 2.4E-14 95.7 8.4 56 64-122 1-56 (421)
30 4gut_A Lysine-specific histone 99.0 2.6E-09 9E-14 100.1 12.6 45 62-107 335-379 (776)
31 2yg5_A Putrescine oxidase; oxi 99.0 4.8E-10 1.6E-14 97.3 7.1 58 63-123 5-62 (453)
32 3dme_A Conserved exported prot 99.0 2.5E-09 8.5E-14 89.4 11.1 39 63-102 4-42 (369)
33 3lov_A Protoporphyrinogen oxid 99.0 7.4E-10 2.5E-14 96.8 8.1 71 63-136 4-76 (475)
34 3d1c_A Flavin-containing putat 99.0 7.4E-10 2.5E-14 93.2 7.7 40 63-104 4-44 (369)
35 2gv8_A Monooxygenase; FMO, FAD 99.0 1.2E-09 4.2E-14 95.4 9.2 43 62-105 5-49 (447)
36 2bi7_A UDP-galactopyranose mut 99.0 1.1E-09 3.6E-14 94.6 8.5 72 63-135 3-75 (384)
37 3cgv_A Geranylgeranyl reductas 99.0 3.7E-09 1.3E-13 89.6 11.8 38 63-101 4-41 (397)
38 3pvc_A TRNA 5-methylaminomethy 99.0 5.1E-09 1.7E-13 96.5 13.6 40 62-102 263-302 (689)
39 3ps9_A TRNA 5-methylaminomethy 99.0 5.3E-09 1.8E-13 96.1 13.3 39 62-101 271-309 (676)
40 3k7m_X 6-hydroxy-L-nicotine ox 99.0 7.5E-10 2.6E-14 95.4 7.1 60 64-124 2-62 (431)
41 1gte_A Dihydropyrimidine dehyd 99.0 1.7E-10 5.7E-15 111.0 3.0 98 5-103 112-227 (1025)
42 3ka7_A Oxidoreductase; structu 99.0 8.2E-10 2.8E-14 94.9 6.9 56 64-122 1-56 (425)
43 2jae_A L-amino acid oxidase; o 99.0 1.9E-09 6.3E-14 94.7 9.3 47 61-108 9-55 (489)
44 3nks_A Protoporphyrinogen oxid 99.0 1E-09 3.4E-14 95.8 7.5 59 64-124 3-63 (477)
45 3nyc_A D-arginine dehydrogenas 99.0 7.4E-09 2.5E-13 87.1 12.5 39 62-102 8-46 (381)
46 2xdo_A TETX2 protein; tetracyc 99.0 2.5E-09 8.7E-14 91.7 9.7 39 61-100 24-62 (398)
47 2iid_A L-amino-acid oxidase; f 99.0 1.9E-09 6.4E-14 94.9 9.0 61 62-123 32-92 (498)
48 3hdq_A UDP-galactopyranose mut 98.9 1.3E-09 4.4E-14 95.0 7.6 72 62-134 28-99 (397)
49 4fk1_A Putative thioredoxin re 98.9 3.2E-09 1.1E-13 87.8 9.6 42 61-104 4-45 (304)
50 2q0l_A TRXR, thioredoxin reduc 98.9 6.4E-09 2.2E-13 85.5 10.6 97 64-186 2-100 (311)
51 2vou_A 2,6-dihydroxypyridine h 98.9 7E-09 2.4E-13 88.9 10.8 37 62-99 4-40 (397)
52 4hb9_A Similarities with proba 98.9 7.8E-09 2.7E-13 87.6 11.0 34 65-99 3-36 (412)
53 3fbs_A Oxidoreductase; structu 98.9 1.9E-08 6.5E-13 81.6 12.7 97 64-187 3-99 (297)
54 1i8t_A UDP-galactopyranose mut 98.9 2.2E-09 7.7E-14 91.9 7.4 68 64-134 2-70 (367)
55 3nlc_A Uncharacterized protein 98.9 4.7E-09 1.6E-13 94.9 9.7 40 62-102 106-145 (549)
56 2i0z_A NAD(FAD)-utilizing dehy 98.9 1.2E-08 4E-13 89.4 11.7 40 62-102 25-64 (447)
57 3fpz_A Thiazole biosynthetic e 98.9 1.9E-09 6.4E-14 90.4 6.2 43 61-104 63-107 (326)
58 2q7v_A Thioredoxin reductase; 98.9 6.6E-09 2.3E-13 86.2 9.2 42 62-105 7-48 (325)
59 1vdc_A NTR, NADPH dependent th 98.9 5E-09 1.7E-13 87.0 8.3 94 63-181 8-106 (333)
60 3alj_A 2-methyl-3-hydroxypyrid 98.9 1.2E-08 4.1E-13 86.8 10.8 39 62-101 10-48 (379)
61 3dje_A Fructosyl amine: oxygen 98.9 3.8E-08 1.3E-12 85.0 14.0 40 62-102 5-45 (438)
62 2x3n_A Probable FAD-dependent 98.9 1.3E-08 4.5E-13 86.9 10.6 36 63-99 6-41 (399)
63 1trb_A Thioredoxin reductase; 98.9 4.6E-09 1.6E-13 86.6 7.5 40 63-104 5-44 (320)
64 4dsg_A UDP-galactopyranose mut 98.9 6.4E-09 2.2E-13 92.2 8.8 59 62-123 8-68 (484)
65 2ywl_A Thioredoxin reductase r 98.8 1.4E-08 4.7E-13 77.6 9.1 94 64-184 2-95 (180)
66 2xve_A Flavin-containing monoo 98.8 4.9E-09 1.7E-13 92.4 7.4 41 64-105 3-49 (464)
67 3nix_A Flavoprotein/dehydrogen 98.8 2.9E-08 9.9E-13 85.0 12.1 33 63-95 5-37 (421)
68 1fl2_A Alkyl hydroperoxide red 98.8 1.1E-08 3.7E-13 84.1 9.0 96 64-186 2-101 (310)
69 2a87_A TRXR, TR, thioredoxin r 98.8 9.5E-09 3.2E-13 85.8 8.8 42 61-104 12-53 (335)
70 3cty_A Thioredoxin reductase; 98.8 1.3E-08 4.4E-13 84.2 9.5 95 62-183 15-110 (319)
71 3r9u_A Thioredoxin reductase; 98.8 1E-08 3.5E-13 83.9 8.4 41 63-105 4-45 (315)
72 2xag_A Lysine-specific histone 98.8 1.2E-08 4.2E-13 96.5 9.7 48 61-109 276-323 (852)
73 1ryi_A Glycine oxidase; flavop 98.8 2.1E-08 7.3E-13 84.7 10.1 37 62-99 16-52 (382)
74 1b37_A Protein (polyamine oxid 98.8 1.1E-08 3.8E-13 89.7 8.5 58 63-123 4-62 (472)
75 3fmw_A Oxygenase; mithramycin, 98.8 1.1E-08 3.9E-13 92.5 8.7 38 62-100 48-85 (570)
76 2bcg_G Secretory pathway GDP d 98.8 5.6E-09 1.9E-13 91.6 6.4 44 62-106 10-53 (453)
77 3oz2_A Digeranylgeranylglycero 98.8 2.4E-09 8.1E-14 90.1 3.8 38 63-101 4-41 (397)
78 2uzz_A N-methyl-L-tryptophan o 98.8 5.5E-08 1.9E-12 81.9 12.2 37 63-100 2-38 (372)
79 2qa1_A PGAE, polyketide oxygen 98.8 4.7E-08 1.6E-12 87.0 12.2 39 61-100 9-47 (500)
80 4a5l_A Thioredoxin reductase; 98.8 1.3E-08 4.6E-13 83.6 8.1 34 62-95 3-36 (314)
81 1y56_B Sarcosine oxidase; dehy 98.8 1.1E-07 3.7E-12 80.4 13.9 34 62-95 4-37 (382)
82 3c96_A Flavin-containing monoo 98.8 2.4E-08 8.2E-13 85.9 9.5 37 63-100 4-41 (410)
83 2qa2_A CABE, polyketide oxygen 98.8 6.1E-08 2.1E-12 86.2 11.8 38 62-100 11-48 (499)
84 2cul_A Glucose-inhibited divis 98.8 4.8E-08 1.6E-12 78.2 10.0 38 63-101 3-40 (232)
85 3ihg_A RDME; flavoenzyme, anth 98.7 3.1E-08 1.1E-12 88.3 9.7 37 62-99 4-40 (535)
86 2z3y_A Lysine-specific histone 98.7 2.4E-08 8.2E-13 91.8 8.8 48 61-109 105-152 (662)
87 1rp0_A ARA6, thiazole biosynth 98.7 3.6E-08 1.2E-12 81.3 8.5 39 63-102 39-78 (284)
88 3atr_A Conserved archaeal prot 98.7 1.6E-07 5.5E-12 82.0 12.8 35 63-98 6-40 (453)
89 1k0i_A P-hydroxybenzoate hydro 98.7 8.8E-08 3E-12 81.5 10.9 33 63-95 2-34 (394)
90 3ayj_A Pro-enzyme of L-phenyla 98.7 1.6E-08 5.6E-13 94.0 6.6 73 63-136 56-158 (721)
91 4gcm_A TRXR, thioredoxin reduc 98.7 1.2E-08 4.2E-13 84.2 5.2 41 62-104 5-45 (312)
92 2bry_A NEDD9 interacting prote 98.7 7.1E-08 2.4E-12 85.8 10.5 41 61-102 90-130 (497)
93 1d5t_A Guanine nucleotide diss 98.7 5.1E-08 1.7E-12 85.1 9.3 45 62-107 5-49 (433)
94 1hyu_A AHPF, alkyl hydroperoxi 98.7 4.8E-08 1.7E-12 87.3 9.3 98 62-186 211-312 (521)
95 2gag_B Heterotetrameric sarcos 98.7 2.1E-07 7.3E-12 79.0 12.6 38 62-101 20-59 (405)
96 3s5w_A L-ornithine 5-monooxyge 98.7 5.3E-08 1.8E-12 84.9 8.3 38 63-101 30-72 (463)
97 3i3l_A Alkylhalidase CMLS; fla 98.6 2.1E-07 7.1E-12 84.7 12.0 38 61-99 21-58 (591)
98 3e1t_A Halogenase; flavoprotei 98.6 2.9E-07 9.9E-12 81.8 11.6 34 63-97 7-40 (512)
99 3ics_A Coenzyme A-disulfide re 98.6 1.3E-07 4.5E-12 85.2 8.4 96 60-181 33-130 (588)
100 3iwa_A FAD-dependent pyridine 98.6 1.7E-07 6E-12 82.2 8.6 37 63-100 3-41 (472)
101 3oc4_A Oxidoreductase, pyridin 98.6 3.1E-07 1.1E-11 80.2 10.2 36 64-100 3-40 (452)
102 3urh_A Dihydrolipoyl dehydroge 98.5 7.8E-08 2.7E-12 84.9 5.0 42 61-103 23-64 (491)
103 3ntd_A FAD-dependent pyridine 98.5 3.5E-07 1.2E-11 81.8 8.4 36 64-100 2-39 (565)
104 3p1w_A Rabgdi protein; GDI RAB 98.5 1.7E-07 5.8E-12 83.4 6.2 46 61-107 18-63 (475)
105 3kd9_A Coenzyme A disulfide re 98.5 7.1E-07 2.4E-11 77.8 10.0 37 63-100 3-41 (449)
106 2oln_A NIKD protein; flavoprot 98.5 1.2E-07 4.2E-12 80.7 4.9 36 63-99 4-39 (397)
107 1d4d_A Flavocytochrome C fumar 98.4 2.9E-07 9.9E-12 83.2 7.4 40 63-103 126-165 (572)
108 1mo9_A ORF3; nucleotide bindin 98.4 3.7E-07 1.3E-11 81.4 7.7 43 60-103 40-82 (523)
109 1c0p_A D-amino acid oxidase; a 98.4 2.5E-07 8.7E-12 77.9 6.2 34 62-95 5-38 (363)
110 3lad_A Dihydrolipoamide dehydr 98.4 2.6E-07 8.9E-12 81.1 6.1 40 62-102 2-41 (476)
111 2gf3_A MSOX, monomeric sarcosi 98.4 2.4E-07 8.2E-12 78.2 5.4 37 63-100 3-39 (389)
112 3k30_A Histamine dehydrogenase 98.4 2.1E-07 7.1E-12 85.8 5.4 42 61-103 389-430 (690)
113 1y56_A Hypothetical protein PH 98.4 1.9E-07 6.4E-12 82.9 4.7 89 63-180 108-196 (493)
114 3l8k_A Dihydrolipoyl dehydroge 98.4 1.2E-07 4.1E-12 83.3 3.4 41 63-104 4-44 (466)
115 3h8l_A NADH oxidase; membrane 98.4 6.4E-07 2.2E-11 76.9 7.7 34 64-98 2-38 (409)
116 3lxd_A FAD-dependent pyridine 98.4 7.5E-07 2.6E-11 76.8 8.0 38 62-100 8-47 (415)
117 1o94_A Tmadh, trimethylamine d 98.4 3.6E-07 1.2E-11 84.9 6.1 43 60-103 386-428 (729)
118 4b63_A L-ornithine N5 monooxyg 98.4 3.7E-07 1.3E-11 81.2 6.0 33 62-94 38-70 (501)
119 1dxl_A Dihydrolipoamide dehydr 98.4 3.9E-07 1.3E-11 79.8 5.9 42 62-104 5-46 (470)
120 1ps9_A 2,4-dienoyl-COA reducta 98.4 2.8E-07 9.5E-12 84.7 5.1 43 60-103 370-412 (671)
121 4at0_A 3-ketosteroid-delta4-5a 98.4 2.8E-07 9.7E-12 81.9 5.0 41 62-103 40-80 (510)
122 2qae_A Lipoamide, dihydrolipoy 98.3 2.7E-07 9.1E-12 80.9 4.5 40 63-103 2-41 (468)
123 3fg2_P Putative rubredoxin red 98.3 1.7E-06 5.8E-11 74.4 9.2 35 64-99 2-38 (404)
124 1y0p_A Fumarate reductase flav 98.3 4.8E-07 1.6E-11 81.5 5.8 41 62-103 125-165 (571)
125 3o0h_A Glutathione reductase; 98.3 3.1E-07 1.1E-11 81.0 4.3 39 63-103 26-64 (484)
126 1q1r_A Putidaredoxin reductase 98.3 2.3E-06 7.7E-11 74.5 9.7 35 63-98 4-40 (431)
127 3jsk_A Cypbp37 protein; octame 98.3 5.3E-07 1.8E-11 77.1 5.4 40 63-103 79-120 (344)
128 3ef6_A Toluene 1,2-dioxygenase 98.3 1.7E-06 5.8E-11 74.7 8.5 36 64-100 3-40 (410)
129 3qfa_A Thioredoxin reductase 1 98.3 4.8E-07 1.6E-11 80.7 5.1 42 61-103 30-79 (519)
130 3klj_A NAD(FAD)-dependent dehy 98.3 1E-06 3.6E-11 75.8 7.1 38 62-100 8-45 (385)
131 1zmd_A Dihydrolipoyl dehydroge 98.3 3.1E-07 1.1E-11 80.6 3.7 40 63-103 6-45 (474)
132 4dna_A Probable glutathione re 98.3 3.7E-07 1.3E-11 79.9 4.1 39 63-103 5-43 (463)
133 2yqu_A 2-oxoglutarate dehydrog 98.3 4.1E-07 1.4E-11 79.4 4.3 39 64-103 2-40 (455)
134 3ihm_A Styrene monooxygenase A 98.3 4.7E-07 1.6E-11 78.7 4.4 34 62-95 21-54 (430)
135 3c4a_A Probable tryptophan hyd 98.3 6.6E-07 2.3E-11 76.2 5.2 35 64-99 1-37 (381)
136 2bc0_A NADH oxidase; flavoprot 98.3 1E-06 3.4E-11 77.9 6.5 38 62-100 34-74 (490)
137 2qcu_A Aerobic glycerol-3-phos 98.3 7.2E-07 2.5E-11 79.1 5.6 37 63-100 3-39 (501)
138 1v59_A Dihydrolipoamide dehydr 98.3 4.8E-07 1.6E-11 79.4 4.2 40 63-103 5-44 (478)
139 3g3e_A D-amino-acid oxidase; F 98.3 4.8E-07 1.7E-11 75.8 4.0 31 65-95 2-38 (351)
140 2v3a_A Rubredoxin reductase; a 98.3 8.7E-06 3E-10 69.4 11.8 86 63-187 145-230 (384)
141 1zk7_A HGII, reductase, mercur 98.3 7.4E-07 2.5E-11 78.0 5.2 40 62-103 3-42 (467)
142 2gjc_A Thiazole biosynthetic e 98.3 7E-07 2.4E-11 75.8 4.8 41 62-103 64-106 (326)
143 3h28_A Sulfide-quinone reducta 98.3 1.5E-06 5.3E-11 75.2 7.1 37 64-101 3-41 (430)
144 3dk9_A Grase, GR, glutathione 98.2 7.2E-07 2.4E-11 78.4 4.9 40 62-103 19-58 (478)
145 1qo8_A Flavocytochrome C3 fuma 98.2 7.4E-07 2.5E-11 80.2 5.0 40 62-102 120-159 (566)
146 2gmh_A Electron transfer flavo 98.2 8.7E-07 3E-11 80.3 5.5 39 63-102 35-79 (584)
147 3da1_A Glycerol-3-phosphate de 98.2 7.9E-07 2.7E-11 80.2 5.2 40 62-102 17-56 (561)
148 3dgz_A Thioredoxin reductase 2 98.2 6.3E-07 2.1E-11 79.1 4.4 41 62-103 5-53 (488)
149 2yqu_A 2-oxoglutarate dehydrog 98.2 1E-05 3.4E-10 70.6 11.8 84 63-186 167-250 (455)
150 3ic9_A Dihydrolipoamide dehydr 98.2 7.3E-07 2.5E-11 79.0 4.3 39 63-103 8-46 (492)
151 3axb_A Putative oxidoreductase 98.2 6.6E-07 2.2E-11 77.5 3.9 34 62-95 22-56 (448)
152 2eq6_A Pyruvate dehydrogenase 98.2 1E-05 3.6E-10 70.8 11.6 80 63-182 169-248 (464)
153 2cdu_A NADPH oxidase; flavoenz 98.2 3E-06 1E-10 73.8 8.1 36 64-100 1-38 (452)
154 3c4n_A Uncharacterized protein 98.2 1.1E-06 3.9E-11 75.5 4.9 37 63-100 36-74 (405)
155 2rgh_A Alpha-glycerophosphate 98.2 1.4E-06 4.8E-11 78.7 5.7 38 63-101 32-69 (571)
156 3cgb_A Pyridine nucleotide-dis 98.2 3.6E-06 1.2E-10 74.1 8.2 36 64-100 37-74 (480)
157 2r9z_A Glutathione amide reduc 98.2 9.8E-07 3.3E-11 77.5 4.5 39 63-103 4-42 (463)
158 1ojt_A Surface protein; redox- 98.2 9.1E-07 3.1E-11 77.9 4.2 40 63-103 6-45 (482)
159 1xdi_A RV3303C-LPDA; reductase 98.2 7.5E-07 2.6E-11 78.8 3.5 39 63-103 2-43 (499)
160 2hqm_A GR, grase, glutathione 98.2 8.6E-07 2.9E-11 78.1 3.8 40 62-103 10-49 (479)
161 3dgh_A TRXR-1, thioredoxin red 98.2 1.3E-06 4.3E-11 76.9 4.9 33 62-94 8-40 (483)
162 2r0c_A REBC; flavin adenine di 98.2 1.5E-06 5.1E-11 78.0 5.4 37 63-100 26-62 (549)
163 1onf_A GR, grase, glutathione 98.2 1.2E-06 4.2E-11 77.6 4.7 39 63-103 2-40 (500)
164 1fec_A Trypanothione reductase 98.2 1.2E-06 3.9E-11 77.6 4.5 40 63-103 3-51 (490)
165 1nhp_A NADH peroxidase; oxidor 98.2 4.2E-06 1.5E-10 72.8 8.1 36 64-100 1-38 (447)
166 1ges_A Glutathione reductase; 98.2 9.7E-07 3.3E-11 77.2 3.6 39 63-103 4-42 (450)
167 1lvl_A Dihydrolipoamide dehydr 98.1 1.4E-06 4.8E-11 76.3 4.4 40 63-104 5-44 (458)
168 1lqt_A FPRA; NADP+ derivative, 98.1 1.3E-06 4.4E-11 77.0 4.1 40 63-103 3-49 (456)
169 2wpf_A Trypanothione reductase 98.1 9.9E-07 3.4E-11 78.2 3.1 40 63-103 7-55 (495)
170 2eq6_A Pyruvate dehydrogenase 98.1 1.5E-06 5.1E-11 76.3 4.1 39 63-103 6-44 (464)
171 2aqj_A Tryptophan halogenase, 98.1 2.7E-06 9.1E-11 75.9 5.8 33 63-95 5-40 (538)
172 3pl8_A Pyranose 2-oxidase; sub 98.1 2.4E-06 8.3E-11 78.1 5.2 41 62-103 45-85 (623)
173 4eqs_A Coenzyme A disulfide re 98.1 3.9E-06 1.3E-10 73.2 6.4 35 64-99 1-37 (437)
174 2gag_A Heterotetrameric sarcos 98.1 2E-06 7E-11 82.2 4.9 41 63-104 128-168 (965)
175 2r9z_A Glutathione amide reduc 98.1 3E-05 1E-09 68.0 12.0 83 63-185 166-248 (463)
176 2wdq_A Succinate dehydrogenase 98.1 2.1E-06 7.3E-11 77.9 4.8 38 63-101 7-44 (588)
177 1ebd_A E3BD, dihydrolipoamide 98.1 2.4E-06 8.2E-11 74.5 4.9 39 63-103 3-41 (455)
178 1cjc_A Protein (adrenodoxin re 98.1 2.4E-06 8.2E-11 75.3 4.8 40 63-103 6-47 (460)
179 3vrd_B FCCB subunit, flavocyto 98.1 4.8E-06 1.6E-10 71.1 6.6 33 63-95 2-36 (401)
180 1ebd_A E3BD, dihydrolipoamide 98.1 2.6E-05 9E-10 67.9 11.4 79 63-181 170-248 (455)
181 1chu_A Protein (L-aspartate ox 98.1 2.6E-06 8.8E-11 76.6 5.0 38 63-102 8-45 (540)
182 2weu_A Tryptophan 5-halogenase 98.1 2.1E-06 7E-11 75.9 4.2 33 63-95 2-37 (511)
183 1v59_A Dihydrolipoamide dehydr 98.1 2.8E-05 9.4E-10 68.1 11.2 80 63-182 183-264 (478)
184 2dkh_A 3-hydroxybenzoate hydro 98.1 2.2E-06 7.5E-11 78.4 4.2 36 63-99 32-68 (639)
185 1ges_A Glutathione reductase; 98.1 3E-05 1E-09 67.7 11.2 84 63-186 167-251 (450)
186 2a8x_A Dihydrolipoyl dehydroge 98.1 2.2E-06 7.4E-11 75.0 3.9 39 63-103 3-41 (464)
187 2e4g_A Tryptophan halogenase; 98.1 3.9E-06 1.3E-10 75.2 5.7 34 62-95 24-60 (550)
188 2bs2_A Quinol-fumarate reducta 98.1 2.9E-06 9.8E-11 78.2 4.9 37 63-100 5-41 (660)
189 2pyx_A Tryptophan halogenase; 98.1 3.5E-06 1.2E-10 75.1 5.2 34 62-95 6-51 (526)
190 2h88_A Succinate dehydrogenase 98.0 3E-06 1E-10 77.5 4.8 38 63-101 18-55 (621)
191 1pj5_A N,N-dimethylglycine oxi 98.0 4.5E-06 1.5E-10 78.4 5.9 36 62-98 3-39 (830)
192 1nhp_A NADH peroxidase; oxidor 98.0 2.7E-05 9.4E-10 67.6 10.5 82 63-183 149-230 (447)
193 1ojt_A Surface protein; redox- 98.0 2.9E-05 1E-09 68.2 10.4 81 63-183 185-265 (482)
194 2x8g_A Thioredoxin glutathione 98.0 3.4E-06 1.1E-10 76.2 4.3 33 62-94 106-138 (598)
195 1kf6_A Fumarate reductase flav 98.0 4.4E-06 1.5E-10 76.1 4.9 38 63-101 5-44 (602)
196 2e5v_A L-aspartate oxidase; ar 98.0 4.8E-06 1.6E-10 73.5 5.0 31 65-95 1-31 (472)
197 1zmd_A Dihydrolipoyl dehydroge 98.0 5.8E-05 2E-09 66.0 11.8 79 63-180 178-257 (474)
198 1pn0_A Phenol 2-monooxygenase; 97.9 7E-06 2.4E-10 75.5 5.1 35 63-98 8-47 (665)
199 2qae_A Lipoamide, dihydrolipoy 97.9 7.3E-05 2.5E-09 65.3 11.3 80 63-182 174-254 (468)
200 3g5s_A Methylenetetrahydrofola 97.9 1.1E-05 3.8E-10 70.5 5.9 38 64-102 2-39 (443)
201 2zxi_A TRNA uridine 5-carboxym 97.9 9.1E-06 3.1E-10 74.6 5.4 33 63-95 27-59 (637)
202 1xdi_A RV3303C-LPDA; reductase 97.9 7.8E-05 2.7E-09 65.8 11.3 84 63-186 182-265 (499)
203 1fec_A Trypanothione reductase 97.9 8.3E-05 2.8E-09 65.6 11.3 84 63-186 187-274 (490)
204 2hqm_A GR, grase, glutathione 97.9 9E-05 3.1E-09 65.1 11.5 82 63-184 185-268 (479)
205 3gyx_A Adenylylsulfate reducta 97.9 9.8E-06 3.4E-10 74.7 5.5 33 63-95 22-60 (662)
206 3ces_A MNMG, tRNA uridine 5-ca 97.9 8E-06 2.7E-10 75.1 4.7 34 62-95 27-60 (651)
207 1onf_A GR, grase, glutathione 97.9 7.8E-05 2.7E-09 65.9 11.0 84 63-186 176-260 (500)
208 3ef6_A Toluene 1,2-dioxygenase 97.9 5.2E-05 1.8E-09 65.3 9.6 87 62-187 142-228 (410)
209 1jnr_A Adenylylsulfate reducta 97.9 1.1E-05 3.7E-10 73.9 5.6 34 62-95 21-58 (643)
210 1lvl_A Dihydrolipoamide dehydr 97.9 6.1E-05 2.1E-09 65.8 9.9 35 63-98 171-205 (458)
211 3oc4_A Oxidoreductase, pyridin 97.9 0.00013 4.4E-09 63.5 11.9 83 63-184 147-229 (452)
212 2gqw_A Ferredoxin reductase; f 97.9 0.00015 5.2E-09 62.3 12.2 35 63-98 145-179 (408)
213 1mo9_A ORF3; nucleotide bindin 97.9 0.00015 5.3E-09 64.4 12.5 82 64-185 215-300 (523)
214 3lxd_A FAD-dependent pyridine 97.9 0.00014 4.9E-09 62.4 11.8 86 63-187 152-238 (415)
215 3fg2_P Putative rubredoxin red 97.8 0.0002 6.8E-09 61.3 12.4 86 63-187 142-228 (404)
216 2gqw_A Ferredoxin reductase; f 97.8 1.7E-05 5.9E-10 68.3 5.7 37 62-99 6-44 (408)
217 3cp8_A TRNA uridine 5-carboxym 97.8 1.1E-05 3.9E-10 74.0 4.7 39 62-101 20-59 (641)
218 1kdg_A CDH, cellobiose dehydro 97.8 1.1E-05 3.8E-10 72.1 4.6 34 62-95 6-39 (546)
219 1dxl_A Dihydrolipoamide dehydr 97.8 6.5E-05 2.2E-09 65.5 9.4 79 63-181 177-255 (470)
220 2wpf_A Trypanothione reductase 97.8 0.00013 4.6E-09 64.4 11.4 84 63-186 191-278 (495)
221 1q1r_A Putidaredoxin reductase 97.8 0.00017 5.7E-09 62.6 11.9 86 63-187 149-237 (431)
222 2v3a_A Rubredoxin reductase; a 97.8 1.5E-05 5.1E-10 67.9 5.0 33 63-95 4-38 (384)
223 3ntd_A FAD-dependent pyridine 97.8 0.00015 5.3E-09 64.5 11.8 33 63-95 151-183 (565)
224 4b1b_A TRXR, thioredoxin reduc 97.8 1.2E-05 4E-10 72.6 4.5 33 63-95 42-74 (542)
225 1zk7_A HGII, reductase, mercur 97.8 0.00018 6.2E-09 62.8 12.0 81 63-184 176-256 (467)
226 4b1b_A TRXR, thioredoxin reduc 97.8 0.00011 3.8E-09 66.1 10.8 83 63-186 223-305 (542)
227 2a8x_A Dihydrolipoyl dehydroge 97.8 0.00013 4.5E-09 63.6 11.1 79 63-181 171-249 (464)
228 3iwa_A FAD-dependent pyridine 97.8 0.00015 5.2E-09 63.3 11.3 86 63-187 159-245 (472)
229 3t37_A Probable dehydrogenase; 97.8 1.1E-05 3.6E-10 71.4 3.9 34 62-95 16-50 (526)
230 1m6i_A Programmed cell death p 97.8 1.6E-05 5.3E-10 70.4 4.7 38 61-99 9-48 (493)
231 1xhc_A NADH oxidase /nitrite r 97.8 1.6E-05 5.5E-10 67.7 4.5 34 63-98 8-41 (367)
232 3cgb_A Pyridine nucleotide-dis 97.8 0.00013 4.4E-09 64.1 10.4 81 63-183 186-266 (480)
233 3o0h_A Glutathione reductase; 97.8 0.00016 5.4E-09 63.5 11.0 85 63-187 191-275 (484)
234 3sx6_A Sulfide-quinone reducta 97.8 1.7E-05 5.9E-10 68.8 4.5 34 64-98 5-41 (437)
235 3ic9_A Dihydrolipoamide dehydr 97.8 0.00018 6.2E-09 63.5 11.1 78 63-181 174-251 (492)
236 3hyw_A Sulfide-quinone reducta 97.8 2.2E-05 7.5E-10 68.1 4.9 33 63-95 2-36 (430)
237 3d1c_A Flavin-containing putat 97.7 9.2E-05 3.1E-09 61.8 8.3 92 62-186 165-257 (369)
238 2cdu_A NADPH oxidase; flavoenz 97.7 0.00032 1.1E-08 60.9 12.0 80 63-181 149-229 (452)
239 3lad_A Dihydrolipoamide dehydr 97.7 0.00027 9.2E-09 61.7 11.5 80 63-182 180-259 (476)
240 2bc0_A NADH oxidase; flavoprot 97.7 0.00023 7.8E-09 62.7 11.1 34 62-95 193-226 (490)
241 3urh_A Dihydrolipoyl dehydroge 97.7 0.00033 1.1E-08 61.5 11.3 80 63-182 198-277 (491)
242 4g6h_A Rotenone-insensitive NA 97.7 3.2E-05 1.1E-09 68.8 4.5 34 62-95 41-74 (502)
243 4dna_A Probable glutathione re 97.6 0.00033 1.1E-08 61.1 10.0 83 63-185 170-254 (463)
244 1ju2_A HydroxynitrIle lyase; f 97.6 2.6E-05 8.8E-10 69.9 3.0 36 62-99 25-60 (536)
245 1vg0_A RAB proteins geranylger 97.6 9E-05 3.1E-09 68.2 6.1 46 62-108 7-52 (650)
246 3s5w_A L-ornithine 5-monooxyge 97.6 0.00019 6.6E-09 62.2 7.9 34 62-95 226-261 (463)
247 3dk9_A Grase, GR, glutathione 97.6 0.00064 2.2E-08 59.4 11.3 80 63-182 187-268 (478)
248 1m6i_A Programmed cell death p 97.5 0.00047 1.6E-08 60.9 10.2 86 63-187 180-269 (493)
249 1xhc_A NADH oxidase /nitrite r 97.5 0.00046 1.6E-08 58.6 9.8 32 64-95 144-175 (367)
250 3q9t_A Choline dehydrogenase a 97.5 7E-05 2.4E-09 67.9 4.3 36 62-98 5-41 (577)
251 1n4w_A CHOD, cholesterol oxida 97.5 9.8E-05 3.4E-09 65.5 5.0 35 63-98 5-39 (504)
252 3ics_A Coenzyme A-disulfide re 97.4 0.0009 3.1E-08 60.0 11.0 76 63-178 187-262 (588)
253 3itj_A Thioredoxin reductase 1 97.4 0.0011 3.8E-08 54.1 10.2 34 62-95 172-205 (338)
254 4eqs_A Coenzyme A disulfide re 97.4 0.0011 3.9E-08 57.5 10.7 33 63-95 147-179 (437)
255 1coy_A Cholesterol oxidase; ox 97.4 0.00012 4.2E-09 65.0 4.5 34 62-95 10-43 (507)
256 1trb_A Thioredoxin reductase; 97.4 0.002 6.9E-08 52.4 11.3 34 62-95 144-177 (320)
257 3l8k_A Dihydrolipoyl dehydroge 97.4 0.0014 4.6E-08 57.3 10.8 78 63-182 172-250 (466)
258 3qvp_A Glucose oxidase; oxidor 97.3 0.00012 4.2E-09 66.5 3.8 35 62-97 18-53 (583)
259 2zbw_A Thioredoxin reductase; 97.3 0.0018 6.3E-08 53.1 10.6 33 63-95 152-184 (335)
260 3ab1_A Ferredoxin--NADP reduct 97.3 0.0019 6.5E-08 53.8 10.6 33 63-95 163-195 (360)
261 3dgz_A Thioredoxin reductase 2 97.3 0.0016 5.6E-08 57.1 10.3 33 63-95 185-217 (488)
262 3fim_B ARYL-alcohol oxidase; A 97.2 0.0001 3.5E-09 66.7 2.5 33 63-95 2-35 (566)
263 3kd9_A Coenzyme A disulfide re 97.2 0.0022 7.5E-08 55.5 10.9 34 62-95 147-180 (449)
264 3dgh_A TRXR-1, thioredoxin red 97.2 0.001 3.6E-08 58.2 8.8 33 63-95 187-219 (483)
265 1gpe_A Protein (glucose oxidas 97.2 0.00024 8.1E-09 64.4 4.5 34 62-95 23-57 (587)
266 2jbv_A Choline oxidase; alcoho 97.2 0.00023 7.9E-09 63.9 4.4 34 62-95 12-46 (546)
267 3fwz_A Inner membrane protein 97.2 0.00072 2.5E-08 49.5 6.1 35 61-95 5-39 (140)
268 2q0l_A TRXR, thioredoxin reduc 97.1 0.0045 1.5E-07 50.2 11.1 33 63-95 143-175 (311)
269 3qfa_A Thioredoxin reductase 1 97.1 0.0031 1.1E-07 55.9 10.5 33 63-95 210-242 (519)
270 2q7v_A Thioredoxin reductase; 97.1 0.0046 1.6E-07 50.6 10.7 33 63-95 152-184 (325)
271 4gcm_A TRXR, thioredoxin reduc 97.1 0.00057 1.9E-08 55.9 4.9 37 63-100 145-181 (312)
272 3cty_A Thioredoxin reductase; 97.0 0.0055 1.9E-07 50.0 10.5 33 63-95 155-187 (319)
273 1fl2_A Alkyl hydroperoxide red 97.0 0.009 3.1E-07 48.3 11.6 33 63-95 144-176 (310)
274 2x8g_A Thioredoxin glutathione 97.0 0.0062 2.1E-07 54.7 11.6 33 63-95 286-318 (598)
275 3f8d_A Thioredoxin reductase ( 97.0 0.0055 1.9E-07 49.5 10.1 33 63-95 154-186 (323)
276 3lzw_A Ferredoxin--NADP reduct 96.9 0.0044 1.5E-07 50.4 8.9 33 63-95 154-186 (332)
277 3klj_A NAD(FAD)-dependent dehy 96.9 0.0011 3.6E-08 56.8 5.4 39 63-102 146-184 (385)
278 2g1u_A Hypothetical protein TM 96.9 0.0015 5.1E-08 48.5 5.5 34 62-95 18-51 (155)
279 3r9u_A Thioredoxin reductase; 96.9 0.0092 3.1E-07 48.1 10.7 33 63-95 147-179 (315)
280 3llv_A Exopolyphosphatase-rela 96.8 0.0017 5.7E-08 47.2 5.3 33 63-95 6-38 (141)
281 1id1_A Putative potassium chan 96.8 0.002 7E-08 47.6 5.6 33 63-95 3-35 (153)
282 4a5l_A Thioredoxin reductase; 96.8 0.0014 4.7E-08 53.3 4.9 34 62-95 151-184 (314)
283 1lss_A TRK system potassium up 96.7 0.0019 6.6E-08 46.2 5.1 32 64-95 5-36 (140)
284 4g6h_A Rotenone-insensitive NA 96.7 0.0042 1.4E-07 55.1 8.0 32 64-95 218-263 (502)
285 3fbs_A Oxidoreductase; structu 96.7 0.005 1.7E-07 49.2 7.6 32 63-95 141-172 (297)
286 3ic5_A Putative saccharopine d 96.6 0.0024 8.1E-08 44.3 4.3 33 63-95 5-38 (118)
287 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0032 1.1E-07 45.1 5.1 33 63-95 6-38 (144)
288 3c85_A Putative glutathione-re 96.4 0.004 1.4E-07 47.2 5.2 34 62-95 38-72 (183)
289 3k30_A Histamine dehydrogenase 96.4 0.012 4E-07 54.1 9.0 37 62-99 522-560 (690)
290 3lk7_A UDP-N-acetylmuramoylala 96.4 0.0028 9.7E-08 55.4 4.6 34 62-95 8-41 (451)
291 2x5o_A UDP-N-acetylmuramoylala 96.3 0.0036 1.2E-07 54.5 4.8 33 63-95 5-37 (439)
292 4e12_A Diketoreductase; oxidor 96.3 0.0056 1.9E-07 50.0 5.5 33 63-95 4-36 (283)
293 3ado_A Lambda-crystallin; L-gu 96.1 0.0061 2.1E-07 51.3 4.8 33 63-95 6-38 (319)
294 1f0y_A HCDH, L-3-hydroxyacyl-C 96.1 0.0064 2.2E-07 50.0 4.9 32 64-95 16-47 (302)
295 1vdc_A NTR, NADPH dependent th 96.0 0.0073 2.5E-07 49.4 4.8 34 62-95 158-191 (333)
296 2gag_A Heterotetrameric sarcos 95.9 0.021 7.1E-07 54.6 8.4 33 63-95 284-316 (965)
297 3gwf_A Cyclohexanone monooxyge 95.9 0.0076 2.6E-07 53.9 5.0 36 62-98 177-212 (540)
298 2a87_A TRXR, TR, thioredoxin r 95.9 0.0084 2.9E-07 49.4 5.0 34 62-95 154-187 (335)
299 2dpo_A L-gulonate 3-dehydrogen 95.9 0.0081 2.8E-07 50.4 4.8 33 63-95 6-38 (319)
300 3l4b_C TRKA K+ channel protien 95.9 0.0078 2.7E-07 47.0 4.4 31 65-95 2-32 (218)
301 1zej_A HBD-9, 3-hydroxyacyl-CO 95.8 0.0097 3.3E-07 49.4 4.9 33 62-95 11-43 (293)
302 2xve_A Flavin-containing monoo 95.8 0.01 3.5E-07 51.9 5.2 37 62-99 196-232 (464)
303 1ks9_A KPA reductase;, 2-dehyd 95.8 0.011 3.9E-07 47.5 5.1 31 65-95 2-32 (291)
304 4ap3_A Steroid monooxygenase; 95.8 0.0091 3.1E-07 53.5 4.9 36 62-98 190-225 (549)
305 2gv8_A Monooxygenase; FMO, FAD 95.8 0.011 3.7E-07 51.1 5.2 36 62-98 211-247 (447)
306 3uox_A Otemo; baeyer-villiger 95.7 0.0087 3E-07 53.6 4.7 36 62-98 184-219 (545)
307 1kyq_A Met8P, siroheme biosynt 95.7 0.0084 2.9E-07 49.5 4.2 34 62-95 12-45 (274)
308 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.013 4.5E-07 46.9 5.2 35 61-95 29-63 (223)
309 1gte_A Dihydropyrimidine dehyd 95.7 0.029 1E-06 53.9 8.5 33 63-95 332-365 (1025)
310 3k6j_A Protein F01G10.3, confi 95.7 0.015 5.2E-07 51.3 5.9 34 62-95 53-86 (460)
311 4a7p_A UDP-glucose dehydrogena 95.6 0.012 4E-07 51.8 5.0 33 63-95 8-40 (446)
312 3i83_A 2-dehydropantoate 2-red 95.6 0.012 4.1E-07 48.9 4.8 32 64-95 3-34 (320)
313 3ghy_A Ketopantoate reductase 95.6 0.015 5E-07 48.7 5.4 32 64-95 4-35 (335)
314 4dio_A NAD(P) transhydrogenase 95.6 0.015 5.2E-07 50.5 5.5 34 62-95 189-222 (405)
315 2raf_A Putative dinucleotide-b 95.6 0.017 5.7E-07 45.2 5.2 35 63-98 19-53 (209)
316 2ew2_A 2-dehydropantoate 2-red 95.5 0.014 4.7E-07 47.5 4.8 31 65-95 5-35 (316)
317 3dtt_A NADP oxidoreductase; st 95.5 0.017 5.8E-07 46.1 5.2 34 62-95 18-51 (245)
318 2y0c_A BCEC, UDP-glucose dehyd 95.5 0.013 4.4E-07 51.8 4.8 33 63-95 8-40 (478)
319 1zcj_A Peroxisomal bifunctiona 95.5 0.017 5.8E-07 50.8 5.4 34 62-95 36-69 (463)
320 3oj0_A Glutr, glutamyl-tRNA re 95.4 0.007 2.4E-07 44.2 2.4 33 63-95 21-53 (144)
321 4ffl_A PYLC; amino acid, biosy 95.4 0.027 9.3E-07 47.2 6.4 41 64-104 2-42 (363)
322 3hn2_A 2-dehydropantoate 2-red 95.4 0.013 4.5E-07 48.4 4.3 32 64-95 3-34 (312)
323 3p2y_A Alanine dehydrogenase/p 95.4 0.016 5.6E-07 49.9 4.9 34 62-95 183-216 (381)
324 3eag_A UDP-N-acetylmuramate:L- 95.4 0.016 5.4E-07 48.4 4.7 33 63-95 4-37 (326)
325 1pzg_A LDH, lactate dehydrogen 95.3 0.023 8E-07 47.7 5.7 32 64-95 10-42 (331)
326 3gg2_A Sugar dehydrogenase, UD 95.3 0.016 5.6E-07 50.8 4.8 32 64-95 3-34 (450)
327 2ewd_A Lactate dehydrogenase,; 95.3 0.023 7.7E-07 47.2 5.4 32 64-95 5-37 (317)
328 3doj_A AT3G25530, dehydrogenas 95.3 0.024 8.1E-07 46.9 5.5 33 63-95 21-53 (310)
329 1hyu_A AHPF, alkyl hydroperoxi 95.3 0.016 5.6E-07 51.3 4.7 34 62-95 354-387 (521)
330 2vdc_G Glutamate synthase [NAD 95.3 0.022 7.5E-07 49.8 5.4 35 61-95 262-297 (456)
331 1bg6_A N-(1-D-carboxylethyl)-L 95.2 0.021 7.1E-07 47.5 5.1 32 64-95 5-36 (359)
332 3g0o_A 3-hydroxyisobutyrate de 95.2 0.022 7.5E-07 46.8 5.1 32 64-95 8-39 (303)
333 1lld_A L-lactate dehydrogenase 95.2 0.02 6.9E-07 47.2 4.8 32 64-95 8-41 (319)
334 3qha_A Putative oxidoreductase 95.2 0.017 5.9E-07 47.4 4.3 35 63-98 15-49 (296)
335 3pef_A 6-phosphogluconate dehy 95.2 0.023 8E-07 46.2 5.1 32 64-95 2-33 (287)
336 1z82_A Glycerol-3-phosphate de 95.2 0.023 7.9E-07 47.3 5.1 34 62-95 13-46 (335)
337 1x13_A NAD(P) transhydrogenase 95.1 0.024 8.1E-07 49.0 5.2 34 62-95 171-204 (401)
338 3g17_A Similar to 2-dehydropan 95.1 0.018 6.2E-07 47.1 4.3 32 64-95 3-34 (294)
339 1l7d_A Nicotinamide nucleotide 95.1 0.027 9.2E-07 48.2 5.4 34 62-95 171-204 (384)
340 2hjr_A Malate dehydrogenase; m 95.1 0.029 1E-06 47.1 5.5 32 64-95 15-47 (328)
341 3q2o_A Phosphoribosylaminoimid 95.1 0.057 1.9E-06 45.8 7.4 44 60-103 11-54 (389)
342 3k96_A Glycerol-3-phosphate de 95.0 0.028 9.7E-07 47.7 5.3 33 63-95 29-61 (356)
343 1pjc_A Protein (L-alanine dehy 95.0 0.029 1E-06 47.5 5.4 33 63-95 167-199 (361)
344 3pdu_A 3-hydroxyisobutyrate de 95.0 0.02 6.9E-07 46.5 4.2 31 65-95 3-33 (287)
345 2vns_A Metalloreductase steap3 95.0 0.033 1.1E-06 43.5 5.3 33 63-95 28-60 (215)
346 1txg_A Glycerol-3-phosphate de 95.0 0.022 7.6E-07 46.9 4.4 30 65-94 2-31 (335)
347 1nyt_A Shikimate 5-dehydrogena 95.0 0.031 1E-06 45.4 5.2 34 62-95 118-151 (271)
348 3mog_A Probable 3-hydroxybutyr 94.9 0.027 9.2E-07 49.9 5.1 33 63-95 5-37 (483)
349 1jw9_B Molybdopterin biosynthe 94.9 0.026 8.8E-07 45.5 4.6 33 63-95 31-64 (249)
350 3g79_A NDP-N-acetyl-D-galactos 94.9 0.026 8.9E-07 50.0 5.0 34 64-98 19-54 (478)
351 1ps9_A 2,4-dienoyl-COA reducta 94.9 0.17 5.7E-06 46.2 10.5 30 62-91 493-522 (671)
352 3l9w_A Glutathione-regulated p 94.9 0.032 1.1E-06 48.4 5.4 33 63-95 4-36 (413)
353 1t2d_A LDH-P, L-lactate dehydr 94.8 0.039 1.3E-06 46.2 5.6 32 64-95 5-37 (322)
354 3l6d_A Putative oxidoreductase 94.8 0.044 1.5E-06 45.2 5.8 33 63-95 9-41 (306)
355 1mv8_A GMD, GDP-mannose 6-dehy 94.8 0.022 7.5E-07 49.5 4.1 31 65-95 2-32 (436)
356 2eez_A Alanine dehydrogenase; 94.8 0.036 1.2E-06 47.1 5.4 34 62-95 165-198 (369)
357 2v6b_A L-LDH, L-lactate dehydr 94.8 0.03 1E-06 46.3 4.8 31 65-95 2-34 (304)
358 4dll_A 2-hydroxy-3-oxopropiona 94.8 0.03 1E-06 46.5 4.7 33 63-95 31-63 (320)
359 2h78_A Hibadh, 3-hydroxyisobut 94.7 0.027 9.1E-07 46.0 4.3 32 64-95 4-35 (302)
360 3tl2_A Malate dehydrogenase; c 94.7 0.04 1.4E-06 46.1 5.4 34 62-95 7-41 (315)
361 2vhw_A Alanine dehydrogenase; 94.7 0.039 1.3E-06 47.1 5.4 34 62-95 167-200 (377)
362 3hwr_A 2-dehydropantoate 2-red 94.7 0.033 1.1E-06 46.2 4.7 32 63-95 19-50 (318)
363 2pv7_A T-protein [includes: ch 94.6 0.055 1.9E-06 44.4 5.9 33 63-95 21-54 (298)
364 4a9w_A Monooxygenase; baeyer-v 94.6 0.031 1.1E-06 45.5 4.4 33 62-95 162-194 (357)
365 3phh_A Shikimate dehydrogenase 94.6 0.048 1.6E-06 44.8 5.4 33 63-95 118-150 (269)
366 4e21_A 6-phosphogluconate dehy 94.5 0.041 1.4E-06 46.8 5.1 34 62-95 21-54 (358)
367 3k5i_A Phosphoribosyl-aminoimi 94.5 0.056 1.9E-06 46.3 6.0 47 57-104 18-64 (403)
368 3vtf_A UDP-glucose 6-dehydroge 94.5 0.031 1.1E-06 49.1 4.4 33 63-95 21-53 (444)
369 1evy_A Glycerol-3-phosphate de 94.5 0.022 7.5E-07 47.9 3.2 31 65-95 17-47 (366)
370 2wtb_A MFP2, fatty acid multif 94.5 0.046 1.6E-06 50.7 5.6 33 63-95 312-344 (725)
371 1p77_A Shikimate 5-dehydrogena 94.5 0.035 1.2E-06 45.2 4.3 34 62-95 118-151 (272)
372 1jay_A Coenzyme F420H2:NADP+ o 94.4 0.044 1.5E-06 42.2 4.7 31 65-95 2-33 (212)
373 2egg_A AROE, shikimate 5-dehyd 94.4 0.045 1.5E-06 45.2 5.0 34 62-95 140-174 (297)
374 3e8x_A Putative NAD-dependent 94.4 0.054 1.9E-06 42.2 5.2 34 62-95 20-54 (236)
375 3ego_A Probable 2-dehydropanto 94.4 0.045 1.5E-06 45.2 4.9 31 64-95 3-33 (307)
376 4g65_A TRK system potassium up 94.4 0.021 7.3E-07 50.1 3.0 31 65-95 5-35 (461)
377 3pid_A UDP-glucose 6-dehydroge 94.3 0.037 1.3E-06 48.4 4.4 31 64-95 37-67 (432)
378 3gpi_A NAD-dependent epimerase 94.3 0.063 2.2E-06 43.0 5.5 32 64-95 4-35 (286)
379 1pjq_A CYSG, siroheme synthase 94.3 0.043 1.5E-06 48.1 4.8 34 62-95 11-44 (457)
380 2rir_A Dipicolinate synthase, 94.3 0.056 1.9E-06 44.4 5.3 34 62-95 156-189 (300)
381 1dlj_A UDP-glucose dehydrogena 94.3 0.034 1.2E-06 47.8 4.1 30 65-95 2-31 (402)
382 4ezb_A Uncharacterized conserv 94.3 0.041 1.4E-06 45.8 4.4 32 64-95 25-57 (317)
383 2uyy_A N-PAC protein; long-cha 94.3 0.065 2.2E-06 44.0 5.6 33 63-95 30-62 (316)
384 1guz_A Malate dehydrogenase; o 94.3 0.051 1.7E-06 45.1 5.0 31 65-95 2-34 (310)
385 3d4o_A Dipicolinate synthase s 94.2 0.06 2E-06 44.1 5.3 34 62-95 154-187 (293)
386 1yqg_A Pyrroline-5-carboxylate 94.2 0.046 1.6E-06 43.5 4.5 31 65-95 2-33 (263)
387 2f1k_A Prephenate dehydrogenas 94.2 0.05 1.7E-06 43.7 4.8 31 65-95 2-32 (279)
388 1cjc_A Protein (adrenodoxin re 94.2 0.05 1.7E-06 47.5 4.9 34 62-95 144-198 (460)
389 2zyd_A 6-phosphogluconate dehy 94.2 0.047 1.6E-06 48.2 4.8 34 62-95 14-47 (480)
390 3orq_A N5-carboxyaminoimidazol 94.2 0.1 3.6E-06 44.1 6.8 43 61-103 10-52 (377)
391 2g5c_A Prephenate dehydrogenas 94.2 0.056 1.9E-06 43.6 4.9 31 65-95 3-35 (281)
392 3ggo_A Prephenate dehydrogenas 94.2 0.062 2.1E-06 44.7 5.3 33 63-95 33-67 (314)
393 3gvi_A Malate dehydrogenase; N 94.2 0.065 2.2E-06 45.0 5.4 33 63-95 7-40 (324)
394 1wdk_A Fatty oxidation complex 94.1 0.051 1.7E-06 50.4 5.1 34 62-95 313-346 (715)
395 2qyt_A 2-dehydropantoate 2-red 94.1 0.037 1.3E-06 45.1 3.8 30 65-94 10-45 (317)
396 3qsg_A NAD-binding phosphogluc 94.1 0.047 1.6E-06 45.2 4.5 33 63-95 24-57 (312)
397 2a9f_A Putative malic enzyme ( 94.1 0.055 1.9E-06 46.8 4.9 35 61-95 186-221 (398)
398 1a5z_A L-lactate dehydrogenase 94.1 0.048 1.7E-06 45.4 4.5 31 65-95 2-34 (319)
399 4gbj_A 6-phosphogluconate dehy 94.1 0.038 1.3E-06 45.7 3.8 33 63-95 5-37 (297)
400 3ktd_A Prephenate dehydrogenas 94.0 0.062 2.1E-06 45.5 5.1 32 64-95 9-40 (341)
401 1yj8_A Glycerol-3-phosphate de 94.0 0.045 1.5E-06 46.3 4.2 33 65-98 23-62 (375)
402 1o94_A Tmadh, trimethylamine d 94.0 0.049 1.7E-06 50.3 4.7 34 62-95 527-562 (729)
403 2p4q_A 6-phosphogluconate dehy 94.0 0.068 2.3E-06 47.4 5.5 34 62-95 9-42 (497)
404 1vl6_A Malate oxidoreductase; 93.9 0.062 2.1E-06 46.4 5.0 35 61-95 190-225 (388)
405 4huj_A Uncharacterized protein 93.9 0.036 1.2E-06 43.5 3.2 32 64-95 24-56 (220)
406 3p7m_A Malate dehydrogenase; p 93.9 0.08 2.7E-06 44.4 5.6 33 63-95 5-38 (321)
407 1hdo_A Biliverdin IX beta redu 93.9 0.093 3.2E-06 39.4 5.5 32 64-95 4-36 (206)
408 1ur5_A Malate dehydrogenase; o 93.9 0.071 2.4E-06 44.2 5.1 32 64-95 3-35 (309)
409 3cky_A 2-hydroxymethyl glutara 93.9 0.058 2E-06 43.8 4.5 32 64-95 5-36 (301)
410 3c24_A Putative oxidoreductase 93.9 0.064 2.2E-06 43.5 4.7 32 64-95 12-44 (286)
411 1hyh_A L-hicdh, L-2-hydroxyiso 93.8 0.057 1.9E-06 44.6 4.4 31 65-95 3-35 (309)
412 2rcy_A Pyrroline carboxylate r 93.8 0.076 2.6E-06 42.2 5.0 34 64-98 5-42 (262)
413 2aef_A Calcium-gated potassium 93.8 0.028 9.7E-07 44.2 2.4 32 63-95 9-40 (234)
414 2gf2_A Hibadh, 3-hydroxyisobut 93.8 0.058 2E-06 43.7 4.3 31 65-95 2-32 (296)
415 1vpd_A Tartronate semialdehyde 93.8 0.053 1.8E-06 44.0 4.1 31 65-95 7-37 (299)
416 2hk9_A Shikimate dehydrogenase 93.8 0.064 2.2E-06 43.6 4.6 33 63-95 129-161 (275)
417 3pqe_A L-LDH, L-lactate dehydr 93.7 0.079 2.7E-06 44.5 5.1 33 63-95 5-39 (326)
418 3don_A Shikimate dehydrogenase 93.7 0.062 2.1E-06 44.2 4.4 34 62-95 116-150 (277)
419 3ond_A Adenosylhomocysteinase; 93.7 0.075 2.6E-06 47.2 5.2 35 61-95 263-297 (488)
420 3ius_A Uncharacterized conserv 93.7 0.078 2.7E-06 42.3 4.9 32 64-95 6-37 (286)
421 3c7a_A Octopine dehydrogenase; 93.6 0.045 1.5E-06 46.7 3.6 29 65-93 4-33 (404)
422 3zwc_A Peroxisomal bifunctiona 93.6 0.086 2.9E-06 49.1 5.6 34 62-95 315-348 (742)
423 3gt0_A Pyrroline-5-carboxylate 93.6 0.097 3.3E-06 41.5 5.3 32 64-95 3-38 (247)
424 1x0v_A GPD-C, GPDH-C, glycerol 93.6 0.042 1.4E-06 45.8 3.3 34 64-98 9-49 (354)
425 1w4x_A Phenylacetone monooxyge 93.6 0.071 2.4E-06 47.3 4.9 34 62-95 185-218 (542)
426 4gx0_A TRKA domain protein; me 93.5 0.092 3.1E-06 46.8 5.6 35 64-99 349-383 (565)
427 2o3j_A UDP-glucose 6-dehydroge 93.5 0.05 1.7E-06 48.0 3.8 32 64-95 10-43 (481)
428 1leh_A Leucine dehydrogenase; 93.5 0.088 3E-06 45.0 5.2 35 61-95 171-205 (364)
429 3jyo_A Quinate/shikimate dehyd 93.5 0.094 3.2E-06 43.1 5.2 34 62-95 126-160 (283)
430 3tnl_A Shikimate dehydrogenase 93.5 0.095 3.2E-06 43.9 5.3 34 62-95 153-187 (315)
431 3ldh_A Lactate dehydrogenase; 93.5 0.082 2.8E-06 44.6 4.9 34 62-95 20-55 (330)
432 1y6j_A L-lactate dehydrogenase 93.5 0.09 3.1E-06 43.8 5.1 32 64-95 8-41 (318)
433 4e4t_A Phosphoribosylaminoimid 93.5 0.12 4E-06 44.7 6.0 35 61-95 33-67 (419)
434 3ew7_A LMO0794 protein; Q8Y8U8 93.4 0.097 3.3E-06 39.8 4.9 31 65-95 2-33 (221)
435 3ojo_A CAP5O; rossmann fold, c 93.4 0.065 2.2E-06 46.8 4.3 33 63-95 11-43 (431)
436 1i36_A Conserved hypothetical 93.4 0.067 2.3E-06 42.6 4.1 30 65-94 2-31 (264)
437 4gwg_A 6-phosphogluconate dehy 93.4 0.093 3.2E-06 46.5 5.3 32 64-95 5-36 (484)
438 2cvz_A Dehydrogenase, 3-hydrox 93.4 0.068 2.3E-06 43.0 4.1 30 65-95 3-32 (289)
439 3o8q_A Shikimate 5-dehydrogena 93.4 0.099 3.4E-06 43.0 5.1 34 62-95 125-159 (281)
440 3tri_A Pyrroline-5-carboxylate 93.4 0.11 3.7E-06 42.3 5.4 33 63-95 3-38 (280)
441 1np3_A Ketol-acid reductoisome 93.4 0.11 3.7E-06 43.6 5.4 33 63-95 16-48 (338)
442 1nvt_A Shikimate 5'-dehydrogen 93.4 0.075 2.6E-06 43.4 4.3 33 62-95 127-159 (287)
443 3pwz_A Shikimate dehydrogenase 93.3 0.1 3.5E-06 42.6 5.1 34 62-95 119-153 (272)
444 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.3 0.088 3E-06 46.4 5.0 31 65-95 3-33 (478)
445 1lu9_A Methylene tetrahydromet 93.3 0.11 3.9E-06 42.2 5.3 34 62-95 118-152 (287)
446 3h2s_A Putative NADH-flavin re 93.3 0.11 3.6E-06 39.8 4.9 31 65-95 2-33 (224)
447 1oju_A MDH, malate dehydrogena 93.3 0.081 2.8E-06 43.8 4.4 31 65-95 2-34 (294)
448 3d1l_A Putative NADP oxidoredu 93.2 0.094 3.2E-06 41.9 4.7 32 64-95 11-43 (266)
449 2q3e_A UDP-glucose 6-dehydroge 93.2 0.079 2.7E-06 46.4 4.5 32 64-95 6-39 (467)
450 2pgd_A 6-phosphogluconate dehy 93.2 0.094 3.2E-06 46.2 5.0 31 65-95 4-34 (482)
451 3ce6_A Adenosylhomocysteinase; 93.2 0.1 3.4E-06 46.5 5.2 35 61-95 272-306 (494)
452 3u62_A Shikimate dehydrogenase 93.2 0.13 4.3E-06 41.7 5.4 33 62-95 108-141 (253)
453 1gpj_A Glutamyl-tRNA reductase 93.1 0.1 3.4E-06 44.9 5.0 34 62-95 166-200 (404)
454 2d5c_A AROE, shikimate 5-dehyd 93.1 0.13 4.3E-06 41.3 5.2 33 62-95 116-148 (263)
455 4aj2_A L-lactate dehydrogenase 93.1 0.11 3.8E-06 43.8 5.0 35 61-95 17-53 (331)
456 3fbt_A Chorismate mutase and s 93.1 0.099 3.4E-06 43.1 4.6 34 62-95 121-155 (282)
457 4b4o_A Epimerase family protei 93.1 0.14 4.7E-06 41.3 5.5 35 65-100 2-37 (298)
458 3dfu_A Uncharacterized protein 93.0 0.031 1.1E-06 45.0 1.5 31 64-94 7-37 (232)
459 3vku_A L-LDH, L-lactate dehydr 93.0 0.11 3.6E-06 43.8 4.8 33 63-95 9-43 (326)
460 2i6t_A Ubiquitin-conjugating e 93.0 0.099 3.4E-06 43.4 4.6 32 64-95 15-48 (303)
461 3t4e_A Quinate/shikimate dehyd 93.0 0.13 4.5E-06 42.9 5.3 34 62-95 147-181 (312)
462 2dbq_A Glyoxylate reductase; D 92.9 0.14 4.8E-06 42.9 5.5 34 62-95 149-182 (334)
463 2iz1_A 6-phosphogluconate dehy 92.9 0.12 4.2E-06 45.3 5.3 32 64-95 6-37 (474)
464 4hv4_A UDP-N-acetylmuramate--L 92.9 0.072 2.4E-06 47.1 3.8 34 62-95 21-55 (494)
465 3i6i_A Putative leucoanthocyan 92.9 0.13 4.6E-06 42.3 5.3 33 63-95 10-43 (346)
466 3gvp_A Adenosylhomocysteinase 92.9 0.12 4.3E-06 45.1 5.2 35 61-95 218-252 (435)
467 1zud_1 Adenylyltransferase THI 92.8 0.11 3.6E-06 41.9 4.4 34 62-95 27-61 (251)
468 2qrj_A Saccharopine dehydrogen 92.8 0.13 4.4E-06 44.5 5.1 39 63-102 214-257 (394)
469 2izz_A Pyrroline-5-carboxylate 92.8 0.11 3.7E-06 43.1 4.6 32 64-95 23-58 (322)
470 3h8v_A Ubiquitin-like modifier 92.7 0.11 3.6E-06 43.2 4.4 34 62-95 35-69 (292)
471 4id9_A Short-chain dehydrogena 92.7 0.16 5.3E-06 41.7 5.4 34 62-95 18-52 (347)
472 2ahr_A Putative pyrroline carb 92.7 0.11 3.6E-06 41.4 4.2 32 64-95 4-35 (259)
473 3rui_A Ubiquitin-like modifier 92.6 0.14 4.8E-06 43.4 5.0 34 62-95 33-67 (340)
474 3fi9_A Malate dehydrogenase; s 92.6 0.13 4.5E-06 43.5 4.9 33 63-95 8-43 (343)
475 3nep_X Malate dehydrogenase; h 92.6 0.13 4.4E-06 43.0 4.7 31 65-95 2-34 (314)
476 1lqt_A FPRA; NADP+ derivative, 92.6 0.12 4.2E-06 44.9 4.8 34 62-95 146-200 (456)
477 1edz_A 5,10-methylenetetrahydr 92.5 0.12 3.9E-06 43.6 4.4 35 61-95 175-210 (320)
478 3vps_A TUNA, NAD-dependent epi 92.5 0.15 5.1E-06 41.0 5.0 33 63-95 7-40 (321)
479 3obb_A Probable 3-hydroxyisobu 92.5 0.11 3.9E-06 42.9 4.3 32 64-95 4-35 (300)
480 1ldn_A L-lactate dehydrogenase 92.4 0.15 5.2E-06 42.3 5.0 33 63-95 6-40 (316)
481 2z1m_A GDP-D-mannose dehydrata 92.3 0.16 5.6E-06 41.2 5.1 33 63-95 3-36 (345)
482 1npy_A Hypothetical shikimate 92.3 0.15 5E-06 41.7 4.7 33 63-95 119-152 (271)
483 1y1p_A ARII, aldehyde reductas 92.3 0.22 7.7E-06 40.3 5.8 34 62-95 10-44 (342)
484 2gcg_A Glyoxylate reductase/hy 92.3 0.16 5.5E-06 42.5 5.0 34 62-95 154-187 (330)
485 3d0o_A L-LDH 1, L-lactate dehy 92.3 0.15 5.1E-06 42.4 4.8 33 63-95 6-40 (317)
486 1yb4_A Tartronic semialdehyde 92.2 0.085 2.9E-06 42.6 3.1 30 65-95 5-34 (295)
487 3dhn_A NAD-dependent epimerase 92.2 0.15 5E-06 39.2 4.3 32 64-95 5-37 (227)
488 2d0i_A Dehydrogenase; structur 92.2 0.19 6.4E-06 42.2 5.3 35 61-95 144-178 (333)
489 3ba1_A HPPR, hydroxyphenylpyru 92.1 0.2 7E-06 42.1 5.5 34 62-95 163-196 (333)
490 3h5n_A MCCB protein; ubiquitin 92.1 0.16 5.5E-06 43.0 4.9 33 63-95 118-151 (353)
491 2dkn_A 3-alpha-hydroxysteroid 92.1 0.2 6.8E-06 38.9 5.1 32 64-95 2-34 (255)
492 2pzm_A Putative nucleotide sug 92.0 0.23 7.7E-06 40.6 5.6 34 62-95 19-53 (330)
493 3h9u_A Adenosylhomocysteinase; 92.0 0.19 6.4E-06 44.0 5.2 34 62-95 210-243 (436)
494 1rpn_A GDP-mannose 4,6-dehydra 92.0 0.19 6.6E-06 40.8 5.0 36 60-95 11-47 (335)
495 3r6d_A NAD-dependent epimerase 92.0 0.25 8.7E-06 37.8 5.5 32 64-95 6-39 (221)
496 3o38_A Short chain dehydrogena 91.9 0.18 6E-06 40.0 4.7 34 62-95 21-56 (266)
497 2zqz_A L-LDH, L-lactate dehydr 91.9 0.19 6.5E-06 42.1 5.0 34 62-95 8-43 (326)
498 3ax6_A Phosphoribosylaminoimid 91.9 0.21 7.3E-06 41.9 5.3 32 64-95 2-33 (380)
499 2d4a_B Malate dehydrogenase; a 91.9 0.19 6.5E-06 41.7 4.9 31 65-95 1-32 (308)
500 3sx6_A Sulfide-quinone reducta 91.9 0.57 2E-05 40.0 8.1 35 65-100 151-200 (437)
No 1
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.59 E-value=1.9e-14 Score=120.07 Aligned_cols=118 Identities=24% Similarity=0.280 Sum_probs=93.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.+||+|||||++||++|+.|++.|++|+|||+. +.+||++.+..... ..++.+..++....+.+.+.++.|...+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~-~~~gg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS-RGSGGRMSSKRSDA--GALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCGGGCEEEETT--EEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECC-CCCcccceeEecCC--CeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 368999999999999999999999999999998 89999988766654 357888888877777777777776654322
Q ss_pred cC----------------------------chHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 143 LG----------------------------YSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 143 ~~----------------------------~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.. ...+.+.+.. +++|+++++|++|+.++++|+|++.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~~g~~ 147 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDAEGQN 147 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEETTSCE
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeCCCcC
Confidence 10 0223444444 88999999999999999999999887654
No 2
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=121.67 Aligned_cols=121 Identities=20% Similarity=0.231 Sum_probs=91.8
Q ss_pred CCEEEECCCHHHHHHHHHHHH---cCCeEEEEecCCCCCCcCceeeeeCC-cceeeecceeeEeeCCc---hhHHHHHHH
Q 041557 64 PHVKIIGGGMAVLACALRLDK---RGVKSNVFDMGNPDLEGRMGTRMIGR-QPLIFDHATQFFTVNDS---RFGELVDVC 136 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~~~~~gg~~~~~~~~~-~~~~~~~g~~~~~~~~~---~~~~~l~~~ 136 (189)
+||+|||||++||++|+.|++ .|++|+|||+. +.+||++.+.+... ....++++..++..... .+...++.|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~-~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA-DDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS-SSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECC-CCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 479999999999999999999 99999999998 99999998876532 23468889999887665 455666666
Q ss_pred hhhhhhcC----------------------chHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 137 WKVVLLLG----------------------YSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 137 ~~~~~~~~----------------------~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
...+.+.. ...+.+.+... .+++|+++++|++|++++++|+|++.++..
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~-~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~ 151 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKE-SGAEVYFRHRVTQINLRDDKWEVSKQTGSP 151 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHH-HTCEEESSCCEEEEEECSSSEEEEESSSCC
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHh-cCCEEEeCCEEEEEEEcCCEEEEEECCCCE
Confidence 55444321 02234444321 168999999999999998999999877653
No 3
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.52 E-value=1.9e-13 Score=106.29 Aligned_cols=74 Identities=30% Similarity=0.437 Sum_probs=62.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKV 139 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 139 (189)
..||+||||||+||++|+.|+++|++|+|||+. +.+||++.+.+.... .+|+|.+++......+......+...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~-~~~GG~~~~~~~~~~--~~d~g~~~~~~~~~~~~~~~~~~~~~ 75 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS-RGSGGRMSSKRSDAG--ALDMGAQYFTARDRRFATAVKQWQAQ 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCGGGCEEEETTE--EEECSCCCBCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC-CCCCCcccccccCCc--eeecCccccccCcHHHHHHHHHHHhc
Confidence 468999999999999999999999999999998 999999988877653 58889988888777776655554443
No 4
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.33 E-value=3.8e-13 Score=118.94 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=76.2
Q ss_pred cceeecccccCCCCCCCCCCC--CCCcCccccCC-CCcchhhHhhhhhhh----ccccccC-C-CCCCCCEEEECCCHHH
Q 041557 5 TSTIIKATSSQPKTNSTNAQK--PTCRNCRRGSS-YGSPRRSALKKTFTQ----KQFTFTA-P-ISSNPHVKIIGGGMAV 75 (189)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--p~~~~c~r~~~-~~~~~~~~~~~~~~~----~~~~~~~-~-~~~~~~v~IiG~G~~G 75 (189)
|.+++..+.+.|...+..|++ ||+..|+++.. .+++.+..+++.... ..+.... + ....++|+|||||++|
T Consensus 55 A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAG 134 (456)
T 2vdc_G 55 AYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAG 134 (456)
T ss_dssp HHHHHHHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHH
T ss_pred HHHHHHhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHH
Confidence 445555666666666778999 99999999987 788888887776643 2232222 1 2357899999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 76 LACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 76 l~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
|++|+.|+++|++|+|||+. +.+||.+
T Consensus 135 l~aA~~L~~~G~~V~v~e~~-~~~GG~l 161 (456)
T 2vdc_G 135 LAAAEELRAKGYEVHVYDRY-DRMGGLL 161 (456)
T ss_dssp HHHHHHHHHHTCCEEEECSS-SSCSTHH
T ss_pred HHHHHHHHHCCCeEEEEecc-CCCCCee
Confidence 99999999999999999997 8888764
No 5
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.27 E-value=4.4e-12 Score=111.51 Aligned_cols=72 Identities=21% Similarity=0.270 Sum_probs=58.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHH
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDV 135 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~ 135 (189)
...||+|||||++||+||+.|+++ |++|+|||+. +.+||++.+..... .+.+|.|++++....+.+.+++.+
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~-~~~GG~~~T~~~~~-G~~~D~G~h~~~~~~~~v~~l~~e 81 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSN-ETPGGLASTDVTPE-GFLYDVGGHVIFSHYKYFDDCLDE 81 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESS-SSCCGGGCEEECTT-SCEEESSCCCCCCCBHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECC-CCCcCCeeeEEecC-CEEEEeCceEecCCCHHHHHHHHH
Confidence 357899999999999999999985 9999999998 99999998754322 246899998887666666665554
No 6
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.20 E-value=6.5e-11 Score=98.51 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=67.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEe-------eCCchh--HHHH
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFT-------VNDSRF--GELV 133 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~--~~~l 133 (189)
.++|+|||||++|+++|+.|+++|++|+|||+. +.+||.|...... . .......+.. .....+ ...+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~-~~~gg~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAE-ASPGGAWQHAWHS-L--HLFSPAGWSSIPGWPMPASQGPYPARAEV 78 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCS-SSSSGGGGGSCTT-C--BCSSCGGGSCCSSSCCCCCSSSSCBHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC-CCCCCcccCCCCC-c--EecCchhhhhCCCCCCCCCccCCCCHHHH
Confidence 368999999999999999999999999999997 8999987642110 0 0000000000 000000 0111
Q ss_pred HHHhhhhhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEE-EEeCCe
Q 041557 134 DVCWKVVLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWY-LGENGK 184 (189)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~-l~~~~~ 184 (189)
..+. .+.+.. .+++++++++|++++..++.|. |++.++
T Consensus 79 ~~~l-----------~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~v~~~~g 117 (357)
T 4a9w_A 79 LAYL-----------AQYEQK--YALPVLRPIRVQRVSHFGERLRVVARDGR 117 (357)
T ss_dssp HHHH-----------HHHHHH--TTCCEECSCCEEEEEEETTEEEEEETTSC
T ss_pred HHHH-----------HHHHHH--cCCEEEcCCEEEEEEECCCcEEEEEeCCC
Confidence 1111 111111 3789999999999999999999 887775
No 7
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.19 E-value=1.4e-11 Score=108.49 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=39.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceee
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQF 121 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~ 121 (189)
++|+|||||++||+||+.|+++|++|+|||+. +.+||++.+...+++ .||.|+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~-~~~GG~~~t~~~~G~--~~D~G~~~ 56 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQR-DKPGGRAYVYEDQGF--TFDAGPTV 56 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--------CEEEETTE--EEECSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccC-CCCCCcEEEEEeCCE--EEecCcee
Confidence 57999999999999999999999999999997 999999988766542 35555443
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.17 E-value=4.1e-11 Score=104.80 Aligned_cols=75 Identities=23% Similarity=0.430 Sum_probs=59.3
Q ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHH
Q 041557 59 PISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVC 136 (189)
Q Consensus 59 ~~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 136 (189)
|....++|+|||||++||++|+.|+++|++|+|||+. +.+||++.+...++ ..+|.|++++....+.+.++++++
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~-~~~GGr~~t~~~~g--~~~~~g~~~~~~~~~~~~~~~~~~ 86 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESS-ARLGGAVGTHALAG--YLVEQGPNSFLDREPATRALAAAL 86 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSS-SSSBTTCCEEEETT--EEEESSCCCEETTCHHHHHHHHHT
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcC-CCCCceeeeeccCC--eeeecChhhhhhhhHHHHHHHHHc
Confidence 3445689999999999999999999999999999998 99999999887754 358889888876555555555543
No 9
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.17 E-value=1.3e-10 Score=101.52 Aligned_cols=117 Identities=17% Similarity=0.177 Sum_probs=69.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce--------eeeeCCcceeeecceeeEeeCCchhHHH
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG--------TRMIGRQPLIFDHATQFFTVNDSRFGEL 132 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 132 (189)
+..+||+|||||++||++|+.|+++|++|+|||+. +.+|+.+. ...... + ...++..........
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~-~~~g~~~~~sGgg~~n~t~~~~-----~-~~~~~~~~~~~~~~~ 97 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHA-RAPGEKIRISGGGRCNFTNIHA-----S-PRNFLSGNPHFCKSA 97 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCHHHHHSGGGTCEEEETTC-----S-GGGEEESSTTTTHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC-CCCCceeEEcCCCceeccCCCC-----C-HHHHhhcCHHHHHHH
Confidence 34679999999999999999999999999999997 87766531 111100 0 011111111111111
Q ss_pred HHHH--------hhh-hhhc-----C------c-hHHHHHHhc--cCCCcEEEeCceeEEEEEeCCeEEEEeCCe
Q 041557 133 VDVC--------WKV-VLLL-----G------Y-SKSQNLNIF--QTSKVNVVRTCWISNLEPFNGMWYLGENGK 184 (189)
Q Consensus 133 l~~~--------~~~-~~~~-----~------~-~~~~~~l~~--~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~ 184 (189)
+..+ ... +... + . .++.+.+.. ...|++++++++|++|+.++++|.|.+.++
T Consensus 98 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g 172 (417)
T 3v76_A 98 LARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG 172 (417)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE
T ss_pred HHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc
Confidence 1111 111 1100 0 0 123333322 124899999999999999999999988876
No 10
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.14 E-value=8.1e-11 Score=101.43 Aligned_cols=59 Identities=17% Similarity=0.282 Sum_probs=49.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEe
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFT 123 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~ 123 (189)
..++|+|||||++||++|+.|+++| ++|+|||+. +.+||++.+...++ ..+|.|++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~-~~~GG~~~t~~~~G--~~~d~G~~~~~ 64 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERT-DHVGGKCHSPNYHG--RRYEMGAIMGV 64 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSS-SCSSTTCCCCEETT--EECCSSCCCBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECC-CCCCCcccccCCCC--cccccCceeec
Confidence 4578999999999999999999999 999999997 99999998876654 24666665554
No 11
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.13 E-value=9.5e-11 Score=96.87 Aligned_cols=102 Identities=21% Similarity=0.220 Sum_probs=67.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||||++||++|+.|+++|++|+|||+. +.+||.+.... .... .++... .......++... .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~~gG~~~~~~-~~~~-~~~~~~----~~~~~~~~~~~~-~----- 73 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL-PQLGGQLSALY-PEKY-IYDVAG----FPKIRAQELINN-L----- 73 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCHHHHHHC-TTSE-ECCSTT----CSSEEHHHHHHH-H-----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC-CCCCceehhcC-CCce-EeccCC----CCCCCHHHHHHH-H-----
Confidence 368999999999999999999999999999998 89999884311 1100 011000 000011111111 1
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCC-eEEEEeCCee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNG-MWYLGENGKT 185 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~-~w~l~~~~~~ 185 (189)
.+.+.. .+++++++++|++++..++ .|.|.+.+++
T Consensus 74 ------~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~ 109 (332)
T 3lzw_A 74 ------KEQMAK--FDQTICLEQAVESVEKQADGVFKLVTNEET 109 (332)
T ss_dssp ------HHHHTT--SCCEEECSCCEEEEEECTTSCEEEEESSEE
T ss_pred ------HHHHHH--hCCcEEccCEEEEEEECCCCcEEEEECCCE
Confidence 111111 3789999999999998776 8999887764
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.10 E-value=2.4e-10 Score=95.13 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||||++|+++|+.|+++|++|+|||+. +.+||.+.... .. ...++... .......++.+.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~~gg~~~~~~-~~-~~~~~~~~----~~~~~~~~~~~~l------ 71 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL-PEPGGQLTALY-PE-KYIYDVAG----FPKVYAKDLVKGL------ 71 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSCHHHHHTC-TT-SEECCSTT----CSSEEHHHHHHHH------
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC-CCCCCeeeccC-CC-ceeeccCC----CCCCCHHHHHHHH------
Confidence 468999999999999999999999999999997 88998874321 10 00011100 0000111111111
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.+.+.. .+++++++++|+.++.+++.|+|.+.++..
T Consensus 72 ------~~~~~~--~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~ 107 (335)
T 2zbw_A 72 ------VEQVAP--FNPVYSLGERAETLEREGDLFKVTTSQGNA 107 (335)
T ss_dssp ------HHHHGG--GCCEEEESCCEEEEEEETTEEEEEETTSCE
T ss_pred ------HHHHHH--cCCEEEeCCEEEEEEECCCEEEEEECCCCE
Confidence 111111 268999999999999888899998876543
No 13
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.09 E-value=1.7e-10 Score=102.40 Aligned_cols=70 Identities=21% Similarity=0.287 Sum_probs=55.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHH
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVD 134 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 134 (189)
.++|+|||||++||++|+.|+++|++|+|||+. +.+||++.+..... ...+|.|.+++......+.++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~-~~~GGr~~t~~~~~-g~~~d~G~~~~~~~~~~~~~l~~ 73 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEAR-DRVGGRTYTLRNQK-VKYVDLGGSYVGPTQNRILRLAK 73 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSS-SSSBTTCCEECCTT-TSCEESSCCEECTTCHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCCceeecccCC-CcccccCceEecCCcHHHHHHHH
Confidence 468999999999999999999999999999997 99999998876641 13478888877654444444443
No 14
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.09 E-value=5.5e-10 Score=96.69 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=55.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeC--------CcceeeecceeeEeeCCchhHHH
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIG--------RQPLIFDHATQFFTVNDSRFGEL 132 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~ 132 (189)
...++|+|||||++||++|+.|.++|++|+|||+..+.+||++.+.+.. .....++.|..++....+.+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 4567999999999999999999999999999998316899999876632 12235777777765444444444
Q ss_pred HHH
Q 041557 133 VDV 135 (189)
Q Consensus 133 l~~ 135 (189)
+++
T Consensus 122 ~~~ 124 (376)
T 2e1m_A 122 IDK 124 (376)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 15
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.09 E-value=2.2e-10 Score=102.81 Aligned_cols=120 Identities=11% Similarity=0.046 Sum_probs=70.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeC-CchhHHHHHHHhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVN-DSRFGELVDVCWKVV 140 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~l~~~~~~~ 140 (189)
...+|+|||||++|+++|..|++.|++|+|||+. +.+||.|........ ..+.....+... .+. ....+.-..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~-~~~GG~w~~~~~pg~--~~d~~~~~~~~~f~~~---~~~~~~~~~ 88 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETA-GDVGGVWYWNRYPGA--RCDIESIEYCYSFSEE---VLQEWNWTE 88 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTHHHHCCCTTC--BCSSCTTTSSCCSCHH---HHHHCCCCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCC-CCCCCcccccCCCce--eecccccccccccChh---hhhccCccc
Confidence 3578999999999999999999999999999997 899998754333221 122211111111 110 000000000
Q ss_pred hhcCchHHHHHHh----ccCCCcEEEeCceeEEEEEeC--CeEEEEeCCeeee
Q 041557 141 LLLGYSKSQNLNI----FQTSKVNVVRTCWISNLEPFN--GMWYLGENGKTAW 187 (189)
Q Consensus 141 ~~~~~~~~~~~l~----~~~~~v~v~~~t~V~~i~~~~--~~w~l~~~~~~~~ 187 (189)
......++.+++. ....++.++++++|++++.++ +.|+|++.+++.+
T Consensus 89 ~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~ 141 (542)
T 1w4x_A 89 RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRI 141 (542)
T ss_dssp SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEE
Confidence 0000011111111 111246899999999999875 3799998776544
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.08 E-value=1.2e-10 Score=102.41 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=53.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhH
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFG 130 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 130 (189)
++|+|||||++||++|+.|+++|++|+|||+. +.+||++.+...++ ..+|.|++++....+.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~-~~~GGr~~t~~~~g--~~~d~G~~~~~~~~~~~~ 103 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEAR-DRIGGRSWSSNIDG--YPYEMGGTWVHWHQSHVW 103 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSS-SBSBTTCCEEEETT--EEEECSCCCBCTTSHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCC-CCCCCcceecccCC--eeecCCCeEecCccHHHH
Confidence 68999999999999999999999999999997 99999998877654 357888877754333333
No 17
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.08 E-value=2.6e-10 Score=102.92 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=72.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
...+|+|||||++|+++|..|++.|++|+|||+. +.+||.|...+..+. ..|.....+..... ......+.-...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~-~~~GGtw~~~~ypg~--~~dv~s~~y~~~f~--~~~~~~~~~~~~ 94 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAA-SGVGGVWYWNRYPGA--RCDVESIDYSYSFS--PELEQEWNWSEK 94 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTHHHHCCCTTC--BCSSCTTTSSCCSC--HHHHHHCCCSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCC-CCCCCccccCCCCCc--eeCCCchhcccccc--cccccCCCCccC
Confidence 3578999999999999999999999999999997 999998864443221 12222222221100 000000000000
Q ss_pred hcCchHHHHHHhc--cCCCc--EEEeCceeEEEEEeCC--eEEEEeCCeeee
Q 041557 142 LLGYSKSQNLNIF--QTSKV--NVVRTCWISNLEPFNG--MWYLGENGKTAW 187 (189)
Q Consensus 142 ~~~~~~~~~~l~~--~~~~v--~v~~~t~V~~i~~~~~--~w~l~~~~~~~~ 187 (189)
.....++.+++.. ...++ .++++++|++++.+++ .|+|++.+++.+
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i 146 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEV 146 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEE
Confidence 0000111111111 01133 8999999999998765 899999887654
No 18
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.07 E-value=2e-10 Score=101.20 Aligned_cols=60 Identities=28% Similarity=0.458 Sum_probs=49.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTV 124 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~ 124 (189)
..++|+|||||++||++|+.|+++|++|+|||+. +.+||++.+...++ +.+|.|++++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~g--~~~~~g~~~~~~ 71 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE-GKAGGKLRSVSQDG--LIWDEGANTMTE 71 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS-SSSCSSCCEEEETT--EEEESSCCCBCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeC-CCCCCceeeeccCC--eEEecCCccccc
Confidence 3578999999999999999999999999999998 99999998876644 246666655543
No 19
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.07 E-value=1.4e-10 Score=100.49 Aligned_cols=71 Identities=25% Similarity=0.384 Sum_probs=57.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC------CeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHH
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG------VKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVC 136 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g------~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 136 (189)
.++|+|||||++||++|+.|+++| ++|+|||+. +.+||++.+...++. .++.|.+.+....+.+.++++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~-~~~GG~~~s~~~~g~--~~d~G~~~~~~~~~~~~~l~~~l 81 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS-PRVGGKIQTVKKDGY--IIERGPDSFLERKKSAPQLVKDL 81 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS-SSSCTTCCEECCTTC--CEESSCCCEETTCTHHHHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC-CCCCceEEEeccCCE--EeccChhhhhhCCHHHHHHHHHc
Confidence 468999999999999999999999 999999997 999999988766543 47888877765555555555443
No 20
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.07 E-value=2.9e-10 Score=102.45 Aligned_cols=120 Identities=9% Similarity=0.101 Sum_probs=71.1
Q ss_pred CCCEEEECCCHHHHHHHHHHH-HcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLD-KRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~-~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
..+|+|||||++|+++|..|+ +.|++|+|||+. +.+||.|......+. ..+.....+..... ......+.-...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~-~~~GGtw~~~~ypg~--~~d~~s~~~~~~~~--~~~~~~~~~~~~ 82 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKA-DGPGGTWYWNRYPGA--LSDTESHLYRFSFD--RDLLQESTWKTT 82 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESS-SSSCTHHHHCCCTTC--EEEEEGGGSSCCSC--HHHHHHCCCSBS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECC-CCCCCcccccCCCCc--eecCCcceeeeccc--cccccCCCCccc
Confidence 468999999999999999999 999999999997 899998765433321 12222222211100 000000000000
Q ss_pred hcCchHHHHHHhc--cCCCc--EEEeCceeEEEEEeCC--eEEEEeCCeeee
Q 041557 142 LLGYSKSQNLNIF--QTSKV--NVVRTCWISNLEPFNG--MWYLGENGKTAW 187 (189)
Q Consensus 142 ~~~~~~~~~~l~~--~~~~v--~v~~~t~V~~i~~~~~--~w~l~~~~~~~~ 187 (189)
.....++.+++.. ...++ .++++++|++++.+++ .|+|++.+++.+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i 134 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVY 134 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEE
Confidence 0000111111111 01244 8999999999998766 899998887644
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.05 E-value=2.2e-10 Score=101.90 Aligned_cols=59 Identities=25% Similarity=0.320 Sum_probs=51.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecCCCCCCcCceeeee-CCcceeeecceeeEee
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMGNPDLEGRMGTRMI-GRQPLIFDHATQFFTV 124 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~~~~~gg~~~~~~~-~~~~~~~~~g~~~~~~ 124 (189)
.++|+|||||++||+||+.|+++| ++|+|||+. +.+||++.+... ++ ..+|.|++++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~-~riGGr~~t~~~~~G--~~~D~G~~~~~~ 68 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEAR-DRVGGRLQTVTGYQG--RKYDIGASWHHD 68 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSS-SSSBTTCCEEECGGG--CEEESSCCEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCC-CCCCCceeeeecCCC--cEEecCCeEEec
Confidence 468999999999999999999999 999999997 999999988665 33 358999988874
No 22
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.05 E-value=3.9e-10 Score=97.59 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=58.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecCCCCCCcCceeeeeCCcceee-ecceeeEeeCCchhHHHHHH
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMGNPDLEGRMGTRMIGRQPLIF-DHATQFFTVNDSRFGELVDV 135 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~l~~ 135 (189)
...+|+|||||++||++|+.|+++ |++|+|||+. +.+||++.+.........+ +.|.+++....+.+.+++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~-~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~ 80 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERR-PHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQ 80 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSS-SSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCC-CCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHH
Confidence 367999999999999999999999 9999999998 9999999887763112345 47888888766666555544
No 23
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.04 E-value=4.9e-10 Score=94.49 Aligned_cols=104 Identities=16% Similarity=0.204 Sum_probs=67.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
..+||+|||||++||++|+.|+++|++|+|||+. +.+||.+.... .. ...++... ........+.+.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~~gg~~~~~~-~~-~~~~~~~~----~~~~~~~~~~~~l----- 80 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESM-PQLGGQLAALY-PE-KHIYDVAG----FPEVPAIDLVESL----- 80 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCHHHHHTC-TT-SEECCSTT----CSSEEHHHHHHHH-----
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecC-CCCCCcccccC-CC-cccccCCC----CCCCCHHHHHHHH-----
Confidence 3578999999999999999999999999999997 88998874321 10 00111100 0000111111111
Q ss_pred hcCchHHHHHHhccCCCcEEEeCceeEEEEEeCC-eEEEEeCCeee
Q 041557 142 LLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNG-MWYLGENGKTA 186 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~-~w~l~~~~~~~ 186 (189)
.+.+.. .+++++++++|+.++..++ .|.|.+.++..
T Consensus 81 -------~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~ 117 (360)
T 3ab1_A 81 -------WAQAER--YNPDVVLNETVTKYTKLDDGTFETRTNTGNV 117 (360)
T ss_dssp -------HHHHHT--TCCEEECSCCEEEEEECTTSCEEEEETTSCE
T ss_pred -------HHHHHH--hCCEEEcCCEEEEEEECCCceEEEEECCCcE
Confidence 112221 3689999999999998765 79998876643
No 24
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.04 E-value=1.1e-09 Score=95.01 Aligned_cols=39 Identities=38% Similarity=0.543 Sum_probs=35.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
.+||+|||||++|+++|+.|+++|.+|+|||+. +.+|+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~-~~~g~~ 42 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNG-KKIGRK 42 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCC-CCCchh
Confidence 478999999999999999999999999999997 777554
No 25
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.02 E-value=1.2e-09 Score=93.87 Aligned_cols=38 Identities=21% Similarity=0.519 Sum_probs=33.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
...+|+|||||++||++|+.|+++|++|+|||+. +.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~-~~~~ 59 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV-KEIK 59 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC-CCCC
Confidence 5689999999999999999999999999999997 6543
No 26
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.02 E-value=9.2e-10 Score=90.39 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=62.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeee-CCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMI-GRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
.++|+|||||++||++|+.|+++|++|+|||+. +||.+..... ...+ .+ ......++.+.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~---~gg~~~~~~~~~~~~-~~---------~~~~~~~~~~~~----- 76 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET---PGGQLTEAGIVDDYL-GL---------IEIQASDMIKVF----- 76 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS---TTGGGGGCCEECCST-TS---------TTEEHHHHHHHH-----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc---CCCeecccccccccC-CC---------CCCCHHHHHHHH-----
Confidence 478999999999999999999999999999983 8888754211 1000 00 000111111110
Q ss_pred hcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 142 LLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.+.. .++++++ ++|+++..+++.|.|.+.++..+
T Consensus 77 -------~~~~~~--~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~ 112 (323)
T 3f8d_A 77 -------NKHIEK--YEVPVLL-DIVEKIENRGDEFVVKTKRKGEF 112 (323)
T ss_dssp -------HHHHHT--TTCCEEE-SCEEEEEEC--CEEEEESSSCEE
T ss_pred -------HHHHHH--cCCEEEE-EEEEEEEecCCEEEEEECCCCEE
Confidence 111111 3788998 99999998888899988775443
No 27
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.02 E-value=5.9e-10 Score=92.29 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=63.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCC---CCCCcCceeee-eCCcceeeecceeeEeeCCchhHHHHHHHh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGN---PDLEGRMGTRM-IGRQPLIFDHATQFFTVNDSRFGELVDVCW 137 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~---~~~gg~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 137 (189)
..++|+|||||++||++|+.|+++|++|+|||+.. ..+||.+.... ...++ .+. .+. ....+...+..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~-~~~---~~~--~~~~~~~~~~~-- 92 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFP-GFP---DGL--TGSELMDRMRE-- 92 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCST-TCT---TCE--EHHHHHHHHHH--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccC-CCc---ccC--CHHHHHHHHHH--
Confidence 46899999999999999999999999999999940 46888875422 11100 000 000 01112111111
Q ss_pred hhhhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 138 KVVLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 138 ~~~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
.+.. .++++++++ |++++..++.|.+.+
T Consensus 93 -------------~~~~--~gv~i~~~~-v~~i~~~~~~~~v~~ 120 (338)
T 3itj_A 93 -------------QSTK--FGTEIITET-VSKVDLSSKPFKLWT 120 (338)
T ss_dssp -------------HHHH--TTCEEECSC-EEEEECSSSSEEEEE
T ss_pred -------------HHHH--cCCEEEEeE-EEEEEEcCCEEEEEE
Confidence 1111 278999998 999998888898876
No 28
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.02 E-value=3.9e-10 Score=101.69 Aligned_cols=120 Identities=9% Similarity=0.041 Sum_probs=69.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHH-HHHHHhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGE-LVDVCWKVV 140 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~l~~~~~~~ 140 (189)
...+|+|||||++|+++|+.|++.|++|+|||++ +.+||.|....+.+. ..|.....+... |.. ....+.-..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~-~~~GGtw~~~~yPg~--~~d~~~~~y~~~---f~~~~~~~~~~~~ 81 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAG-EDVGGTWYWNRYPGC--RLDTESYAYGYF---ALKGIIPEWEWSE 81 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTHHHHCCCTTC--BCSSCHHHHCHH---HHTTSSTTCCCSB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCC-CCCCCccccCCCCce--eecCchhhcccc---cCcccccCCCccc
Confidence 4578999999999999999999999999999998 899998864443321 122221111100 000 000000000
Q ss_pred hhcCchHHHHHHh----ccCCCcEEEeCceeEEEEEeC--CeEEEEeCCeeee
Q 041557 141 LLLGYSKSQNLNI----FQTSKVNVVRTCWISNLEPFN--GMWYLGENGKTAW 187 (189)
Q Consensus 141 ~~~~~~~~~~~l~----~~~~~v~v~~~t~V~~i~~~~--~~w~l~~~~~~~~ 187 (189)
......++.+++. .......++++++|++++.++ +.|+|++.+++.+
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~ 134 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVV 134 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEE
Confidence 0000011111111 111123789999999999765 4899999887654
No 29
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.01 E-value=6.9e-10 Score=95.72 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=47.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeE
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFF 122 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~ 122 (189)
.||+|||||++||++|+.|+++|++|+|||++ +.+||++.+...++ +.+|.|+.++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~-~~~GG~~~~~~~~g--~~~d~G~~~~ 56 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKS-AMIGGRFTNLPYKG--FQLSTGALHM 56 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTTSSEEEETT--EEEESSSCSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCCCceeEEeccCC--EEEecCCeEE
Confidence 37999999999999999999999999999998 99999998876654 3467765444
No 30
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.00 E-value=2.6e-09 Score=100.10 Aligned_cols=45 Identities=36% Similarity=0.445 Sum_probs=41.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRM 107 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~ 107 (189)
..++|+|||||++||++|+.|++.|++|+|+|+. +.+||++.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~-~~~ggri~T~~ 379 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAK-DRIGGRVWDDK 379 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS-SSSCTTCCEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecc-cceeceeeecc
Confidence 4579999999999999999999999999999997 89999877643
No 31
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.00 E-value=4.8e-10 Score=97.34 Aligned_cols=58 Identities=28% Similarity=0.397 Sum_probs=48.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEe
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFT 123 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~ 123 (189)
.++|+|||||++||++|+.|+++|++|+|||+. +.+||++.+....+ ..+|.|.+++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~g--~~~~~g~~~~~ 62 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEAR-DRVGGRTWTDTIDG--AVLEIGGQWVS 62 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTTCCEEEETT--EEEECSCCCBC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC-CCCCCceeccccCC--ceeccCCeEec
Confidence 468999999999999999999999999999997 99999998766533 24566665554
No 32
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.00 E-value=2.5e-09 Score=89.37 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=34.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. +.+|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~-~~~~~~ 42 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAA-EGIGTG 42 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCCc
Confidence 468999999999999999999999999999997 656543
No 33
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.00 E-value=7.4e-10 Score=96.82 Aligned_cols=71 Identities=17% Similarity=0.340 Sum_probs=57.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHH
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVC 136 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 136 (189)
.++|+|||||++||++|+.|+++| ++|+|||+. +.+||++.+....+. .++.|.+.+....+.+.++++++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~-~~~GG~~~~~~~~g~--~~~~g~~~~~~~~~~~~~l~~~l 76 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAG-ERLGGKVATYREDGF--TIERGPDSYVARKHILTDLIEAI 76 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSS-SSSBTTCCEECSTTC--CEESSCCCEETTSTHHHHHHHHT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECC-CCCCceeEEEeeCCE--EEecCchhhhcccHHHHHHHHHc
Confidence 468999999999999999999999 999999997 999999888766543 47888877765555555555443
No 34
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.99 E-value=7.4e-10 Score=93.18 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=36.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCCcCce
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~~gg~~~ 104 (189)
.++|+|||||++|+++|+.|++.|+ +|+|||+. + +||.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~-~-~Gg~~~ 44 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG-T-VGHSFK 44 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSS-S-TTHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecC-C-CCCccc
Confidence 4689999999999999999999999 99999997 6 888654
No 35
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.99 E-value=1.2e-09 Score=95.37 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=39.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecCCCCCCcCcee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMGNPDLEGRMGT 105 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~~~~~gg~~~~ 105 (189)
..++|+|||||++||++|..|++.|+ +|+|||+. +.+||.|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~-~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR-GSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS-SSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC-CCCCCeecC
Confidence 45789999999999999999999999 99999997 889998754
No 36
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.98 E-value=1.1e-09 Score=94.55 Aligned_cols=72 Identities=13% Similarity=0.239 Sum_probs=58.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCccee-eecceeeEeeCCchhHHHHHH
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLI-FDHATQFFTVNDSRFGELVDV 135 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~l~~ 135 (189)
..+|+|||||++||++|+.|+++|++|+|||+. +.+||++.+.......+. .+.|.+++....+.+.+++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~ 75 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQR-DHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNK 75 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS-SSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEec-CCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHH
Confidence 368999999999999999999999999999997 999999988766311233 478888888776666665554
No 37
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.98 E-value=3.7e-09 Score=89.58 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=34.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
.+||+|||||++|+++|+.|+++|++|+|||+. +.+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~-~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKR-PEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCC-CCCCC
Confidence 468999999999999999999999999999997 66655
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=5.1e-09 Score=96.52 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=35.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
...||+|||||++|+++|+.|+++|++|+|||+. ..+|+.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~-~~~g~g 302 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCAD-AQPAQG 302 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESS-SSTTCS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCC-Cccccc
Confidence 4589999999999999999999999999999996 666543
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.98 E-value=5.3e-09 Score=96.10 Aligned_cols=39 Identities=28% Similarity=0.365 Sum_probs=35.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
..+||+|||||++|+++|+.|+++|++|+|||+. ..+|+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~-~~~g~ 309 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCAD-EAPAL 309 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS-SSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-Ccccc
Confidence 4589999999999999999999999999999996 66653
No 40
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.97 E-value=7.5e-10 Score=95.42 Aligned_cols=60 Identities=23% Similarity=0.322 Sum_probs=47.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCC-cceeeecceeeEee
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGR-QPLIFDHATQFFTV 124 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~-~~~~~~~g~~~~~~ 124 (189)
+||+|||||++||++|+.|+++|++|+|+|+. +.+||++.+..... ....++.|..++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~-~~~GG~~~t~~~~cipg~~~~~g~~~~~~ 62 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGG-ERLGGRAYSRESRNVPGLRVEIGGAYLHR 62 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSS-SSSBTTCCEEECSSSTTCEEESSCCCBCT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecC-CCccCeecceeccCCCCceEecCCeeeCC
Confidence 48999999999999999999999999999997 89999987765441 01235555555443
No 41
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.96 E-value=1.7e-10 Score=110.98 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=72.9
Q ss_pred cceeecccccCCCCCCCCCCC--CCCcCccccCC-CCcchhhHhhhhhhhcc----cccc-CC---------CCCCCCEE
Q 041557 5 TSTIIKATSSQPKTNSTNAQK--PTCRNCRRGSS-YGSPRRSALKKTFTQKQ----FTFT-AP---------ISSNPHVK 67 (189)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--p~~~~c~r~~~-~~~~~~~~~~~~~~~~~----~~~~-~~---------~~~~~~v~ 67 (189)
|.++|..+.+.|...+..|++ ||+..|+++.. .+++.+..++++..... +... .| ....++|+
T Consensus 112 A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~Vv 191 (1025)
T 1gte_A 112 AAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIA 191 (1025)
T ss_dssp HHHHHHHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEE
T ss_pred HHHHHHhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEE
Confidence 445555566666666777887 99999999764 57777777777766532 2211 11 12367999
Q ss_pred EECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCCcCc
Q 041557 68 IIGGGMAVLACALRLDKRGV-KSNVFDMGNPDLEGRM 103 (189)
Q Consensus 68 IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~~gg~~ 103 (189)
|||||++||++|..|+++|+ +|+|||+. +.+||.+
T Consensus 192 VIGgGpAGl~aA~~L~~~G~~~Vtv~E~~-~~~GG~~ 227 (1025)
T 1gte_A 192 LLGAGPASISCASFLARLGYSDITIFEKQ-EYVGGLS 227 (1025)
T ss_dssp EECCSHHHHHHHHHHHHTTCCCEEEEESS-SSCSTHH
T ss_pred EECccHHHHHHHHHHHhcCCCcEEEEeCC-CCCCccc
Confidence 99999999999999999999 79999997 8888753
No 42
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.96 E-value=8.2e-10 Score=94.87 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=47.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeE
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFF 122 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~ 122 (189)
+||+|||||++||++|+.|+++|++|+|||+. +.+||+..+...++. .++.|+..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~-~~~GG~~~~~~~~G~--~~d~G~~~~ 56 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERL-PITGGRFTNLSYKGF--QLSSGAFHM 56 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSS-SSSBTTSSEEEETTE--EEESSSCSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCC-CCCCCceeeeccCCc--EEcCCCceE
Confidence 37999999999999999999999999999998 999999988665543 466665433
No 43
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.96 E-value=1.9e-09 Score=94.74 Aligned_cols=47 Identities=32% Similarity=0.405 Sum_probs=42.0
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeee
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMI 108 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~ 108 (189)
....+|+|||||++||++|+.|+++|++|+|||+. +.+||++.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~-~~~GG~~~~~~~ 55 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEAR-TRPGGRVWTARG 55 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTTCCEEET
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecc-CCCCCceeeecc
Confidence 34678999999999999999999999999999998 999999876543
No 44
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.96 E-value=1e-09 Score=95.83 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=49.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC--eEEEEecCCCCCCcCceeeeeCCcceeeecceeeEee
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV--KSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTV 124 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~ 124 (189)
++|+|||||++||++|+.|+++|+ +|+|||+. +.+||++.+..... ...++.|.+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~-~~~GG~~~t~~~~~-g~~~d~G~~~~~~ 63 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESS-ERLGGWIRSVRGPN-GAIFELGPRGIRP 63 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSS-SSSBTTCCEEECTT-SCEEESSCCCBCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCC-CCCCCceEEEeccC-CeEEEeCCCcccC
Confidence 589999999999999999999999 99999997 99999998865532 2357888776643
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.96 E-value=7.4e-09 Score=87.12 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=34.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..++|+|||||++||++|+.|+ +|++|+|+|+. +.+|+.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~-~~~g~~ 46 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLERE-AQPGYH 46 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSS-SSTTSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECC-CCcccc
Confidence 3579999999999999999999 69999999997 667643
No 46
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.95 E-value=2.5e-09 Score=91.72 Aligned_cols=39 Identities=36% Similarity=0.526 Sum_probs=34.6
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
+..++|+|||||++||++|+.|++.|++|+|||+. +.++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~-~~~~ 62 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD-NDRE 62 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS-SSTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCcc
Confidence 34679999999999999999999999999999996 5543
No 47
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.95 E-value=1.9e-09 Score=94.92 Aligned_cols=61 Identities=25% Similarity=0.274 Sum_probs=48.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEe
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFT 123 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~ 123 (189)
..++|+|||||++||++|+.|+++|++|+|+|+. +.+||++.+.......+.++.|++++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~-~~~gg~~~~~~~~~~~~~~~~g~~~~~ 92 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS-ERPGGRVRTYRNEEAGWYANLGPMRLP 92 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS-SSSBTTCCEEEETTTTEEEESSCCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCCceeeeccCCCCchhhcCccccc
Confidence 4578999999999999999999999999999997 999999877653222234555655443
No 48
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.94 E-value=1.3e-09 Score=94.97 Aligned_cols=72 Identities=22% Similarity=0.237 Sum_probs=54.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHH
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVD 134 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 134 (189)
...+|+|||||++||++|+.|+++|++|+|+|+. +.+||++.+.........++.|++.+....+.+.++++
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~ 99 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRR-PHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLS 99 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEecc-CCCCCccceeeccCCceEeecCCcccCCChHHHHHHHH
Confidence 4679999999999999999999999999999997 99999998765222122246777776655554444443
No 49
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.94 E-value=3.2e-09 Score=87.82 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=36.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
+..+||+||||||+||+||++|+++|++|+|||++ .+||.+.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~--~~gg~~~ 45 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN--TNRNRVT 45 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS--CCGGGGS
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC--CCCCeee
Confidence 45789999999999999999999999999999985 6777653
No 50
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.92 E-value=6.4e-09 Score=85.52 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=62.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCCcCceeeee-CCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMGNPDLEGRMGTRMI-GRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~~gg~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
++|+|||||++|+++|+.|+++|+ +|+|||+. .+||.+..... ..++ +.. .......+.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~--~~gg~~~~~~~~~~~~-----~~~----~~~~~~~~~~~l----- 65 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG--MPGGQITGSSEIENYP-----GVK----EVVSGLDFMQPW----- 65 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS--STTCGGGGCSCBCCST-----TCC----SCBCHHHHHHHH-----
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC--CCCcccccccccccCC-----CCc----ccCCHHHHHHHH-----
Confidence 479999999999999999999999 99999984 67887643211 0000 000 000111111111
Q ss_pred hcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 142 LLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.+.+.. .++++++ ++|++++.+++.|+|.+.++..
T Consensus 66 -------~~~~~~--~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~ 100 (311)
T 2q0l_A 66 -------QEQCFR--FGLKHEM-TAVQRVSKKDSHFVILAEDGKT 100 (311)
T ss_dssp -------HHHHHT--TSCEEEC-SCEEEEEEETTEEEEEETTSCE
T ss_pred -------HHHHHH--cCCEEEE-EEEEEEEEcCCEEEEEEcCCCE
Confidence 111111 3789988 8999999988889987665543
No 51
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.91 E-value=7e-09 Score=88.93 Aligned_cols=37 Identities=27% Similarity=0.594 Sum_probs=33.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
...+|+|||||++||++|+.|+++|++|+|||+. +.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~-~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERS-PQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecC-CCC
Confidence 3578999999999999999999999999999996 543
No 52
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.91 E-value=7.8e-09 Score=87.58 Aligned_cols=34 Identities=32% Similarity=0.543 Sum_probs=31.6
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
+|+||||||+||++|+.|+++|++|+|||+. +.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~-~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERN-SAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecC-CCC
Confidence 6999999999999999999999999999996 554
No 53
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.90 E-value=1.9e-08 Score=81.65 Aligned_cols=97 Identities=20% Similarity=0.225 Sum_probs=59.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhhc
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLLL 143 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~ 143 (189)
++|+|||||++||++|..|+++|++|+|||+. . ..+.+..... . + .........+++..+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~-~~~~~~~~~~-~----~------~~~~~~~~~~~~~~~------- 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAG-E-RRNRFASHSH-G----F------LGQDGKAPGEIIAEA------- 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECC-C-CGGGGCSCCC-S----S------TTCTTCCHHHHHHHH-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCC-C-cccccchhhc-C----C------cCCCCCCHHHHHHHH-------
Confidence 68999999999999999999999999999986 4 3333221100 0 0 000011111111111
Q ss_pred CchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 144 GYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 144 ~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.+... .+++++. .+|++++.+++.|.|.+.++..+
T Consensus 63 -----~~~~~~~-~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~ 99 (297)
T 3fbs_A 63 -----RRQIERY-PTIHWVE-GRVTDAKGSFGEFIVEIDGGRRE 99 (297)
T ss_dssp -----HHHHTTC-TTEEEEE-SCEEEEEEETTEEEEEETTSCEE
T ss_pred -----HHHHHhc-CCeEEEE-eEEEEEEEcCCeEEEEECCCCEE
Confidence 1111111 2567654 59999999999999988776543
No 54
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.90 E-value=2.2e-09 Score=91.89 Aligned_cols=68 Identities=22% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeee-cceeeEeeCCchhHHHHH
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFD-HATQFFTVNDSRFGELVD 134 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~l~ 134 (189)
.+|+|||||++||++|+.|+++|++|+|+|+. +.+||++.+....+ ..++ .|++++....+.+.++++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~g--~~~~~~G~~~~~~~~~~~~~~~~ 70 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKR-NHIGGNAYTEDCEG--IQIHKYGAHIFHTNDKYIWDYVN 70 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSS-SSSSGGGCEEEETT--EEEETTSCCCEEESCHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecC-CCCCcceEeeccCC--ceeeccCCceecCCCHHHHHHHH
Confidence 47999999999999999999999999999997 89999998866543 3454 788888766555544443
No 55
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.90 E-value=4.7e-09 Score=94.90 Aligned_cols=40 Identities=23% Similarity=0.308 Sum_probs=35.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..+||+|||||++||++|+.|++.|++|+|||++ +.++++
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~-~~~~~R 145 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERG-KEVRER 145 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSS-CCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEcc-Cccccc
Confidence 3579999999999999999999999999999997 776544
No 56
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.89 E-value=1.2e-08 Score=89.37 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=36.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
...||+|||||++||++|+.|+++|++|+|+|+. +.+|+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~-~~~g~~ 64 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKG-NKLGRK 64 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECC-CCCCce
Confidence 4579999999999999999999999999999997 777653
No 57
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.88 E-value=1.9e-09 Score=90.35 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=38.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHH--cCCeEEEEecCCCCCCcCce
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDK--RGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~--~g~~v~v~e~~~~~~gg~~~ 104 (189)
...+||+||||||+||+||++|++ .|++|+|||+. +.+||.+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~-~~~GG~~~ 107 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS-VAPGGGSW 107 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS-SSCCTTTT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECC-CCCCceEE
Confidence 346899999999999999999975 59999999997 89999875
No 58
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.88 E-value=6.6e-09 Score=86.21 Aligned_cols=42 Identities=26% Similarity=0.389 Sum_probs=37.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCcee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGT 105 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~ 105 (189)
..++|+|||||++|+++|..|+++|++|+|||+. .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG--MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC--CCCccccc
Confidence 3578999999999999999999999999999995 68888653
No 59
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.87 E-value=5e-09 Score=86.97 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=60.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEec----CCCCCCcCceeeee-CCcceeeecceeeEeeCCchhHHHHHHHh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDM----GNPDLEGRMGTRMI-GRQPLIFDHATQFFTVNDSRFGELVDVCW 137 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~----~~~~~gg~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 137 (189)
.++|+|||||++|+++|+.|++.|++|+|||+ . ..+||.+..... ...+ .+.. .+ ....+...+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~-~~~gg~~~~~~~~~~~~-~~~~---~~--~~~~~~~~l~--- 77 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMAND-IAPGGQLTTTTDVENFP-GFPE---GI--LGVELTDKFR--- 77 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTT-BCTTCGGGGCSEECCST-TCTT---CE--EHHHHHHHHH---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccc-cCCCceeeeccccccCC-CCcc---CC--CHHHHHHHHH---
Confidence 46899999999999999999999999999998 4 567777543211 0000 0000 00 0011111111
Q ss_pred hhhhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 138 KVVLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 138 ~~~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
+.+.. .++++++++ |++++..++.|+|.+
T Consensus 78 ------------~~~~~--~gv~~~~~~-v~~i~~~~~~~~v~~ 106 (333)
T 1vdc_A 78 ------------KQSER--FGTTIFTET-VTKVDFSSKPFKLFT 106 (333)
T ss_dssp ------------HHHHH--TTCEEECCC-CCEEECSSSSEEEEC
T ss_pred ------------HHHHH--CCCEEEEeE-EEEEEEcCCEEEEEE
Confidence 11111 378999987 999988888899887
No 60
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=1.2e-08 Score=86.84 Aligned_cols=39 Identities=23% Similarity=0.476 Sum_probs=34.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
...+|+|||||++||++|+.|+++|++|+|||+. +.+++
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~-~~~~~ 48 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKS-SELRA 48 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSCCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCC
Confidence 3578999999999999999999999999999997 66543
No 61
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.87 E-value=3.8e-08 Score=85.03 Aligned_cols=40 Identities=28% Similarity=0.350 Sum_probs=35.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~~gg~ 102 (189)
...||+|||||++||++|+.|+++|+ +|+|+|+. ...+|.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~-~~~~~~ 45 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPY-PVPSAI 45 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS-CSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCC-CCCCCC
Confidence 45799999999999999999999999 99999997 666654
No 62
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.86 E-value=1.3e-08 Score=86.94 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=32.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..+|+|||||++||++|+.|+++|++|+|||+. +.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~-~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQA-RRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCC
Confidence 368999999999999999999999999999996 554
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.86 E-value=4.6e-09 Score=86.59 Aligned_cols=40 Identities=15% Similarity=0.264 Sum_probs=36.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
.++|+|||||++|+++|+.|+++|++|+|||+ ..+||.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~--~~~gg~~~ 44 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG--MEKGGQLT 44 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC--SSTTGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc--CCCCceEe
Confidence 46899999999999999999999999999997 47888764
No 64
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.85 E-value=6.4e-09 Score=92.18 Aligned_cols=59 Identities=20% Similarity=0.294 Sum_probs=47.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecCCCCCCcCceee-eeCCcceeeecceeeEe
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMGNPDLEGRMGTR-MIGRQPLIFDHATQFFT 123 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~~~~~gg~~~~~-~~~~~~~~~~~g~~~~~ 123 (189)
..++|+|||||++||++|+.|+++| .+|+|||+. +.+||++.+. ..++ +.++.|.+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~-~~~GG~~~~~~~~~g--~~~~~g~~~~~ 68 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECN-DTPGGLSRSFLDENG--FTWDLGGHVIF 68 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESS-SSSSGGGCEEECTTS--CEEESSCCCBC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCC-CCCCCeeeeeecCCC--cEEeeCCcccc
Confidence 4578999999999999999999999 799999998 9999999874 3322 34566655543
No 65
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.84 E-value=1.4e-08 Score=77.64 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=59.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhhc
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLLL 143 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~ 143 (189)
++|+|||||++|+.+|..|++.|.+|+|+|+. +..-.+. .....++ .+.. ......+.+.+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~-~~~~~~~--~~~~~~~-~~~~-----~~~~~~~~~~l~--------- 63 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGG-RSKVKGV--SRVPNYP-GLLD-----EPSGEELLRRLE--------- 63 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCTTTTC--SCCCCST-TCTT-----CCCHHHHHHHHH---------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CCcccCc--hhhhccC-CCcC-----CCCHHHHHHHHH---------
Confidence 47999999999999999999999999999997 5221111 0111000 0000 000111221111
Q ss_pred CchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCe
Q 041557 144 GYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGK 184 (189)
Q Consensus 144 ~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~ 184 (189)
+.+.. .+++++++ +|++++.+++.|.|.+.++
T Consensus 64 ------~~~~~--~gv~v~~~-~v~~i~~~~~~~~v~~~~g 95 (180)
T 2ywl_A 64 ------AHARR--YGAEVRPG-VVKGVRDMGGVFEVETEEG 95 (180)
T ss_dssp ------HHHHH--TTCEEEEC-CCCEEEECSSSEEEECSSC
T ss_pred ------HHHHH--cCCEEEeC-EEEEEEEcCCEEEEEECCC
Confidence 22222 37999999 9999998888899987765
No 66
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.84 E-value=4.9e-09 Score=92.43 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=38.2
Q ss_pred CCEEEECCCHHHHHHHHHHHH---cCCe---EEEEecCCCCCCcCcee
Q 041557 64 PHVKIIGGGMAVLACALRLDK---RGVK---SNVFDMGNPDLEGRMGT 105 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~---~g~~---v~v~e~~~~~~gg~~~~ 105 (189)
++|+|||||++||++|..|++ .|++ |+|||+. +.+||.|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~-~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ-ADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS-SSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC-CCCCCEeec
Confidence 689999999999999999999 9999 9999997 899998864
No 67
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.84 E-value=2.9e-08 Score=85.05 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=31.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 468999999999999999999999999999996
No 68
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.83 E-value=1.1e-08 Score=84.11 Aligned_cols=96 Identities=19% Similarity=0.245 Sum_probs=61.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeee-eCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRM-IGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
+||+|||||++||++|..|+++|++|+|+|+ .+||.+.... ... + .+ ........+... .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~---~~gG~~~~~~~~~~----~-~~-----~~~~~~~~~~~~-~----- 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE---RFGGQILDTVDIEN----Y-IS-----VPKTEGQKLAGA-L----- 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS---STTGGGGGCCEECC----B-TT-----BSSEEHHHHHHH-H-----
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC---CCCceecccccccc----c-cC-----cCCCCHHHHHHH-H-----
Confidence 5899999999999999999999999999975 4688764311 100 0 00 000111111111 1
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeC---CeEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFN---GMWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~---~~w~l~~~~~~~ 186 (189)
.+.+.. .+++++++++|+.+..+. +.|.|.+.++..
T Consensus 63 ------~~~~~~--~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~ 101 (310)
T 1fl2_A 63 ------KVHVDE--YDVDVIDSQSASKLIPAAVEGGLHQIETASGAV 101 (310)
T ss_dssp ------HHHHHT--SCEEEECSCCEEEEECCSSTTCCEEEEETTSCE
T ss_pred ------HHHHHH--cCCeEEccCEEEEEEecccCCceEEEEECCCCE
Confidence 111211 378999999999997653 379998876543
No 69
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.83 E-value=9.5e-09 Score=85.83 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=37.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
+..++|+|||||++|+++|+.|+++|++|+|||+. .+||.+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~~gg~~~ 53 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT--SFGGALM 53 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS--SCSCGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC--CCCCcee
Confidence 34678999999999999999999999999999974 7888764
No 70
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.83 E-value=1.3e-08 Score=84.22 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=61.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeee-CCcceeeecceeeEeeCCchhHHHHHHHhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMI-GRQPLIFDHATQFFTVNDSRFGELVDVCWKVV 140 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~ 140 (189)
..+||+|||||++|+++|+.|+++|++|+|||+. .+||.+..... ..++ + + .......+.+.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~~gg~~~~~~~~~~~~-----~--~---~~~~~~~~~~~~---- 78 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA--VAGGLTAEAPLVENYL-----G--F---KSIVGSELAKLF---- 78 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--STTGGGGGCSCBCCBT-----T--B---SSBCHHHHHHHH----
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC--CCCccccccchhhhcC-----C--C---cccCHHHHHHHH----
Confidence 3578999999999999999999999999999984 67887643211 0000 0 0 000111111111
Q ss_pred hhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCC
Q 041557 141 LLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENG 183 (189)
Q Consensus 141 ~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~ 183 (189)
.+.+.. .++++++ .+|++++.+++.|+|.+++
T Consensus 79 --------~~~~~~--~~v~~~~-~~v~~i~~~~~~~~v~~~~ 110 (319)
T 3cty_A 79 --------ADHAAN--YAKIREG-VEVRSIKKTQGGFDIETND 110 (319)
T ss_dssp --------HHHHHT--TSEEEET-CCEEEEEEETTEEEEEESS
T ss_pred --------HHHHHH--cCCEEEE-eeEEEEEEeCCEEEEEECC
Confidence 111111 3788888 7999999888888887644
No 71
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.82 E-value=1e-08 Score=83.94 Aligned_cols=41 Identities=34% Similarity=0.468 Sum_probs=36.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEE-EecCCCCCCcCcee
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNV-FDMGNPDLEGRMGT 105 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v-~e~~~~~~gg~~~~ 105 (189)
.++|+|||||++||++|..|+++|++|+| +|+ ..+||.+..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~--~~~gG~~~~ 45 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK--GMPGGQITS 45 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS--SSTTGGGGG
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC--CCCCceeee
Confidence 46899999999999999999999999999 998 467888753
No 72
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.81 E-value=1.2e-08 Score=96.45 Aligned_cols=48 Identities=29% Similarity=0.424 Sum_probs=43.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIG 109 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~ 109 (189)
...++|+|||+|++||++|+.|+++|++|+|||+. +.+||++.+.+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~-~~~GG~~~~~~~~ 323 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR-DRVGGRVATFRKG 323 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTTCCEEEET
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec-CcCCCceeeeccc
Confidence 35689999999999999999999999999999997 9999998776553
No 73
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.80 E-value=2.1e-08 Score=84.70 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=33.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..+||+|||||++|+++|+.|+++|++|+|+|+. ...
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~-~~~ 52 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESG-TMG 52 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-STT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCC
Confidence 4579999999999999999999999999999996 443
No 74
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.80 E-value=1.1e-08 Score=89.68 Aligned_cols=58 Identities=21% Similarity=0.449 Sum_probs=49.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCCcCceeeeeCCcceeeecceeeEe
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFT 123 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~ 123 (189)
.++|+|||+|++||++|+.|++.|+ +|+|||+. +.+||++.+....+ ..+|.|++++.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~-~~~gg~~~~~~~~~--~~~d~g~~~~~ 62 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEAT-DHIGGRMHKTNFAG--INVELGANWVE 62 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSS-SSSBTTSCEEEETT--EEEESSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCC-CCCCCceeecccCC--cEEeeCCeEEe
Confidence 5689999999999999999999999 89999998 99999998876654 34777777765
No 75
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.80 E-value=1.1e-08 Score=92.54 Aligned_cols=38 Identities=26% Similarity=0.260 Sum_probs=32.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..+||+|||||++||++|+.|+++|++|+|||+. +.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~-~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKL-VEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSC-SSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCC-CCCC
Confidence 4579999999999999999999999999999996 5543
No 76
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.80 E-value=5.6e-09 Score=91.63 Aligned_cols=44 Identities=18% Similarity=0.194 Sum_probs=41.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTR 106 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~ 106 (189)
..+||+|||+|++||++|..|+++|++|+|+|++ +.+||++.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~-~~~GG~~~t~ 53 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ-DHYGGEAASV 53 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCGGGCEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC-CCCCccccce
Confidence 4579999999999999999999999999999998 9999998874
No 77
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.79 E-value=2.4e-09 Score=90.08 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=34.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
.+||+||||||+||++|+.|+++|++|+|||+. +.+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~-~~~~~ 41 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKR-PEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC-CCCCC
Confidence 479999999999999999999999999999996 66543
No 78
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.79 E-value=5.5e-08 Score=81.87 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=33.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. ...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~-~~~~ 38 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAH-MPPH 38 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSS-CSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC-CCCC
Confidence 468999999999999999999999999999996 5543
No 79
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.79 E-value=4.7e-08 Score=87.01 Aligned_cols=39 Identities=26% Similarity=0.260 Sum_probs=34.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
....+|+|||||++||++|+.|+++|++|+|||+. +.++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~-~~~~ 47 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERL-VERT 47 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC-CC-C
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCC-CCCC
Confidence 45678999999999999999999999999999996 6554
No 80
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.79 E-value=1.3e-08 Score=83.56 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+||+|||||++||+||..|+++|++|+|||+.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~ 36 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF 36 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3479999999999999999999999999999985
No 81
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.79 E-value=1.1e-07 Score=80.40 Aligned_cols=34 Identities=29% Similarity=0.523 Sum_probs=32.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3578999999999999999999999999999996
No 82
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.77 E-value=2.4e-08 Score=85.90 Aligned_cols=37 Identities=24% Similarity=0.560 Sum_probs=33.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVK-SNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~-v~v~e~~~~~~g 100 (189)
..+|+|||||++||++|+.|+++|++ |+|||+. +.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~-~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESS-SEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESS-SSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECC-CCcc
Confidence 57899999999999999999999999 9999996 6654
No 83
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.75 E-value=6.1e-08 Score=86.25 Aligned_cols=38 Identities=32% Similarity=0.347 Sum_probs=34.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
...+|+|||||++||++|+.|+++|++|+|||+. +.++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~-~~~~ 48 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQL-PQRT 48 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC-SSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC-CCCC
Confidence 4678999999999999999999999999999996 5554
No 84
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.75 E-value=4.8e-08 Score=78.17 Aligned_cols=38 Identities=24% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
.+||+|||||++|+.+|..|+++|.+|+|+|+. ....|
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~-~~~~G 40 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS-LDAVM 40 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC-GGGTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC-CCcCC
Confidence 578999999999999999999999999999996 44444
No 85
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.75 E-value=3.1e-08 Score=88.32 Aligned_cols=37 Identities=30% Similarity=0.531 Sum_probs=33.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
...+|+|||||++||++|+.|+++|++|+|||+. +.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~-~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERR-PGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS-SSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCC-CCC
Confidence 3578999999999999999999999999999997 554
No 86
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.73 E-value=2.4e-08 Score=91.79 Aligned_cols=48 Identities=29% Similarity=0.424 Sum_probs=43.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIG 109 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~ 109 (189)
...++|+|||+|++||++|+.|+++|++|+|||+. +.+||++.+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~-~~~gg~~~~~~~~ 152 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR-DRVGGRVATFRKG 152 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS-SSSBTTCCEEEET
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC-CCCCCcccccccc
Confidence 35689999999999999999999999999999997 9999998876553
No 87
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.72 E-value=3.6e-08 Score=81.28 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~~~~~gg~ 102 (189)
.+||+|||||++||++|+.|+++ |++|+|+|+. +.+||.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~-~~~gg~ 78 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS-VSPGGG 78 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESS-SSCCTT
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECC-CCCCCc
Confidence 56899999999999999999997 9999999997 777765
No 88
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.71 E-value=1.6e-07 Score=82.01 Aligned_cols=35 Identities=40% Similarity=0.539 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..||+|||||++|+++|+.|+++|++|+|||+. +.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~-~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSK-PW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSS-CG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC-CC
Confidence 478999999999999999999999999999996 54
No 89
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.71 E-value=8.8e-08 Score=81.52 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|||||++||++|+.|++.|++|+|||+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 34 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQ 34 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 368999999999999999999999999999986
No 90
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.70 E-value=1.6e-08 Score=93.95 Aligned_cols=73 Identities=16% Similarity=0.354 Sum_probs=59.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--------CeEEEEecCCC-CC----------------CcCceeeeeC-C----cc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--------VKSNVFDMGNP-DL----------------EGRMGTRMIG-R----QP 112 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--------~~v~v~e~~~~-~~----------------gg~~~~~~~~-~----~~ 112 (189)
.++|+|||||++||++|+.|.++| ++|+|||+. + .+ ||++.+.... . ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~-~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~ 134 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEAD-PDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGD 134 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCC-TTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEecc-CcccccccchhhHHHhcCcCCceEEEEEccCCcccCCC
Confidence 468999999999999999999999 999999997 8 89 9999887662 2 23
Q ss_pred eeeecceeeEeeCCchhHHHHHHH
Q 041557 113 LIFDHATQFFTVNDSRFGELVDVC 136 (189)
Q Consensus 113 ~~~~~g~~~~~~~~~~~~~~l~~~ 136 (189)
..++.|+..+......+..++..+
T Consensus 135 ~~~e~G~~~~~~~~~~~~~~~~~l 158 (721)
T 3ayj_A 135 TIYEVGAMRFPEIAGLTWHYASAA 158 (721)
T ss_dssp EEEECSCCCEETTCHHHHHHHHHH
T ss_pred cEEecCCEEecCccHHHHHHHHHh
Confidence 468888888876666666666654
No 91
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.70 E-value=1.2e-08 Score=84.21 Aligned_cols=41 Identities=24% Similarity=0.381 Sum_probs=36.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
.++||+|||||++||+||..|+++|++|+|||++ .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~--~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG--IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC--CCCCeee
Confidence 3689999999999999999999999999999984 6788753
No 92
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=7.1e-08 Score=85.75 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=36.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
...++|+|||||++||++|..|++.|++|+|||+. +.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~-~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKR-IKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC-SSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEec-cccCCC
Confidence 35689999999999999999999999999999997 776643
No 93
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.70 E-value=5.1e-08 Score=85.09 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=42.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRM 107 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~ 107 (189)
..++|+|||+|++||++|..|++.|++|+|+|++ +.+||++.+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~-~~~gg~~~s~~ 49 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRN-PYYGGESSSIT 49 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTTSCEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC-CCccccccccc
Confidence 3578999999999999999999999999999998 99999998866
No 94
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.69 E-value=4.8e-08 Score=87.28 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=62.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeee-eCCcceeeecceeeEeeCCchhHHHHHHHhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRM-IGRQPLIFDHATQFFTVNDSRFGELVDVCWKVV 140 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~ 140 (189)
..++|+|||||++|+++|..|+++|++|+|+|+ .+||++.... ... + .+..+ ...+.+...+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~---~~GG~~~~~~~~~~----~-~~~~~--~~~~~l~~~l~------ 274 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE---RFGGQVLDTVDIEN----Y-ISVPK--TEGQKLAGALK------ 274 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---STTGGGTTCSCBCC----B-TTBSS--BCHHHHHHHHH------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC---CCCCcccccccccc----c-CCCCC--CCHHHHHHHHH------
Confidence 467899999999999999999999999999985 4688764211 100 0 00000 01111111111
Q ss_pred hhcCchHHHHHHhccCCCcEEEeCceeEEEEEe---CCeEEEEeCCeee
Q 041557 141 LLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPF---NGMWYLGENGKTA 186 (189)
Q Consensus 141 ~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~---~~~w~l~~~~~~~ 186 (189)
+.+.. .+++++++++|+.+..+ ++.|+|.+.++..
T Consensus 275 ---------~~~~~--~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~ 312 (521)
T 1hyu_A 275 ---------AHVSD--YDVDVIDSQSASKLVPAATEGGLHQIETASGAV 312 (521)
T ss_dssp ---------HHHHT--SCEEEECSCCEEEEECCSSTTSCEEEEETTSCE
T ss_pred ---------HHHHH--cCCEEEcCCEEEEEEeccCCCceEEEEECCCCE
Confidence 12221 37999999999999764 2379998876644
No 95
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.68 E-value=2.1e-07 Score=78.96 Aligned_cols=38 Identities=37% Similarity=0.468 Sum_probs=33.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-cC-CeEEEEecCCCCCCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDK-RG-VKSNVFDMGNPDLEG 101 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~-~g-~~v~v~e~~~~~~gg 101 (189)
...||+|||||++|+++|+.|++ +| ++|+|||+. . +++
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~-~-~~~ 59 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKG-W-LAG 59 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSS-S-TTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCC-C-CCC
Confidence 45799999999999999999999 99 999999997 5 443
No 96
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.66 E-value=5.3e-08 Score=84.86 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=34.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC-----CeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG-----VKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g-----~~v~v~e~~~~~~gg 101 (189)
.+||+|||||++||++|..|++.| ++|+|||+. +.+|.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~-~~~g~ 72 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQ-GDYRW 72 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESC-SSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecC-CCCCC
Confidence 468999999999999999999999 999999997 77763
No 97
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.64 E-value=2.1e-07 Score=84.70 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=34.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
+..+||+|||||++|+++|+.|+++|++|+|||+. +.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~-~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERS-AFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCC-CCC
Confidence 34689999999999999999999999999999996 444
No 98
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.60 E-value=2.9e-07 Score=81.78 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=32.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNP 97 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~ 97 (189)
.+||+|||||++||++|+.|+++|++|+|||+. +
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~-~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLERE-A 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS-C
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccC-C
Confidence 468999999999999999999999999999996 5
No 99
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.57 E-value=1.3e-07 Score=85.23 Aligned_cols=96 Identities=8% Similarity=-0.011 Sum_probs=58.9
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHh
Q 041557 60 ISSNPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCW 137 (189)
Q Consensus 60 ~~~~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 137 (189)
.+..++|+|||||++||++|..|+++ |++|+|||+. +.++-.- ..+.+..+..+. .....+...++.
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~-~~~~~~~-------~~lp~~~~g~~~-~~~~~~~~~~~~-- 101 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERG-EYISFAN-------CGLPYYIGGVIT-ERQKLLVQTVER-- 101 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS-SCSSBCG-------GGHHHHHTTSSC-CGGGGBSSCHHH--
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECC-CCccccC-------CCCchhhcCcCC-ChHHhhccCHHH--
Confidence 34567899999999999999999999 8999999997 6554110 000000010000 000001111111
Q ss_pred hhhhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 138 KVVLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 138 ~~~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
+.. ..+++++++++|++++..++.+.+..
T Consensus 102 --------------~~~-~~gi~v~~~~~V~~id~~~~~v~v~~ 130 (588)
T 3ics_A 102 --------------MSK-RFNLDIRVLSEVVKINKEEKTITIKN 130 (588)
T ss_dssp --------------HHH-HTTCEEECSEEEEEEETTTTEEEEEE
T ss_pred --------------HHH-hcCcEEEECCEEEEEECCCCEEEEee
Confidence 110 12789999999999998888888764
No 100
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.56 E-value=1.7e-07 Score=82.19 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
.++|+|||||++||++|..|+++ |++|+|||++ +.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~-~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA-SRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC-Cccc
Confidence 36899999999999999999999 8999999997 6543
No 101
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.55 E-value=3.1e-07 Score=80.21 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=33.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
++|+|||||++||++|..|+++ |++|+|||++ +.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~-~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQ-ATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS-SCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC-CCCc
Confidence 5899999999999999999999 8999999997 6655
No 102
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.50 E-value=7.8e-08 Score=84.89 Aligned_cols=42 Identities=21% Similarity=0.364 Sum_probs=36.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
+..+||+|||||++|+++|..|+++|++|+|||+. +.+||.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~~GG~~ 64 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKR-STYGGTC 64 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSSHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC-CCCCCcc
Confidence 34689999999999999999999999999999997 8899863
No 103
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.47 E-value=3.5e-07 Score=81.77 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
++|+|||||++||++|+.|+++ |++|+|||+. +.++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~-~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERG-EYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSS-SCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC-CCcc
Confidence 5799999999999999999998 7899999997 6654
No 104
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.47 E-value=1.7e-07 Score=83.37 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=41.9
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeee
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRM 107 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~ 107 (189)
...+||+|||+|++|+++|+.|++.|++|+|+|++ +.+||...+..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~-~~~Gg~~~s~~ 63 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRN-PYYGGETASLN 63 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCGGGCEEC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEecc-CCCCCCccccc
Confidence 44679999999999999999999999999999998 99999987654
No 105
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.46 E-value=7.1e-07 Score=77.79 Aligned_cols=37 Identities=30% Similarity=0.376 Sum_probs=33.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
.++|+|||||++||++|+.|++. |++|+|||+. +.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~-~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEAT-EWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS-SCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECC-Cccc
Confidence 46899999999999999999998 7899999997 6554
No 106
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.45 E-value=1.2e-07 Score=80.68 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=32.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. ...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~-~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERH-TFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCC
Confidence 368999999999999999999999999999996 544
No 107
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.45 E-value=2.9e-07 Score=83.16 Aligned_cols=40 Identities=33% Similarity=0.390 Sum_probs=36.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+|+|||+|++||++|+.|+++|++|+|||+. +.+||..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~-~~~~~~~ 165 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKE-PIPGGNT 165 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSS-SSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecC-CCCCcch
Confidence 568999999999999999999999999999997 8887764
No 108
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.44 E-value=3.7e-07 Score=81.43 Aligned_cols=43 Identities=26% Similarity=0.205 Sum_probs=38.3
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 60 ISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 60 ~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
++..+||+|||||++|+++|+.|++.|++|+|||++ +.+||.+
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~-~~~GG~~ 82 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRW-PFLGGSC 82 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSSCHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCCcc
Confidence 345689999999999999999999999999999997 7688864
No 109
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.43 E-value=2.5e-07 Score=77.92 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=32.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 4579999999999999999999999999999986
No 110
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.42 E-value=2.6e-07 Score=81.05 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=35.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..+||+|||||++|+++|+.|++.|++|+|||+. +.+||+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~~gG~ 41 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKY-KGKEGK 41 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECC-BCTTSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CccCCC
Confidence 3579999999999999999999999999999997 644443
No 111
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.41 E-value=2.4e-07 Score=78.24 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=33.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. ...+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~-~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAF-DPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCC
Confidence 468999999999999999999999999999996 4443
No 112
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.41 E-value=2.1e-07 Score=85.82 Aligned_cols=42 Identities=33% Similarity=0.510 Sum_probs=38.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
...++|+|||||++||++|+.|+++|++|+|||++ +.+||.+
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~-~~~GG~~ 430 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAG-RDLGGRV 430 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS-SSSCTHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecC-CCCCCEe
Confidence 45689999999999999999999999999999997 8888864
No 113
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.40 E-value=1.9e-07 Score=82.86 Aligned_cols=89 Identities=17% Similarity=0.119 Sum_probs=59.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||||++||++|+.|+++ ++|+|||++ +.+||.+...... ..+... ...+++..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~-~~~GG~~~~~~~~------~~g~~~------~~~~~~~~l------ 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEER-GWLGGDMWLKGIK------QEGFNK------DSRKVVEEL------ 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTT-SSSSCSGGGTCSE------ETTTTE------EHHHHHHHH------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCC-CCCCCeeeccccc------cCCCCC------CHHHHHHHH------
Confidence 46899999999999999999999 999999997 8899886431100 001000 111221111
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEE
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLG 180 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~ 180 (189)
.+.+ ..++++++++.|.++...++.|.+.
T Consensus 168 ------~~~l---~~~v~~~~~~~v~~i~~~~~~~~~~ 196 (493)
T 1y56_A 168 ------VGKL---NENTKIYLETSALGVFDKGEYFLVP 196 (493)
T ss_dssp ------HHTC---CTTEEEETTEEECCCEECSSSEEEE
T ss_pred ------HHHH---hcCCEEEcCCEEEEEEcCCcEEEEE
Confidence 1111 2378999999999988777666553
No 114
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.40 E-value=1.2e-07 Score=83.27 Aligned_cols=41 Identities=29% Similarity=0.244 Sum_probs=38.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
.+||+|||||++|+++|..|++.|++|+|||+. +.+||.|.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~-~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPK-GELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTT-SSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCCccc
Confidence 468999999999999999999999999999986 89999864
No 115
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.39 E-value=6.4e-07 Score=76.91 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHH---cCCeEEEEecCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDK---RGVKSNVFDMGNPD 98 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~~~~ 98 (189)
++|+|||||++||++|..|++ .|++|+|||++ +.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~-~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS-RF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS-SE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC-CC
Confidence 479999999999999999999 89999999997 54
No 116
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=7.5e-07 Score=76.80 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=33.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCe--EEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVK--SNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~--v~v~e~~~~~~g 100 (189)
..++|+|||||++|+++|..|+++|++ |+|+|+. +.++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~-~~~~ 47 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGRE-PEIP 47 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESS-SSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecC-CCCC
Confidence 357899999999999999999999988 9999997 5543
No 117
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.37 E-value=3.6e-07 Score=84.88 Aligned_cols=43 Identities=21% Similarity=0.299 Sum_probs=38.9
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 60 ISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 60 ~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
....++|+|||||++||++|+.|+++|++|+|||+. +.+||.+
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~-~~~GG~~ 428 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTA-EKIGGHL 428 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSTTTTH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCcCCee
Confidence 345689999999999999999999999999999997 8888875
No 118
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.37 E-value=3.7e-07 Score=81.22 Aligned_cols=33 Identities=21% Similarity=0.029 Sum_probs=26.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
..+||+|||+||+||++|..|.+.|...+++|+
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~ 70 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSA 70 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEec
Confidence 457899999999999999999987765444444
No 119
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.9e-07 Score=79.75 Aligned_cols=42 Identities=26% Similarity=0.375 Sum_probs=38.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
..+||+|||||++|+++|..|++.|++|+|||+. +.+||.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~-~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR-GALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS-SSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCcccccc
Confidence 3578999999999999999999999999999997 88998753
No 120
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.36 E-value=2.8e-07 Score=84.66 Aligned_cols=43 Identities=26% Similarity=0.493 Sum_probs=38.6
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 60 ISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 60 ~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
....++|+|||||++|+.+|..|+++|++|+|||+. +.+||.+
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~-~~~gg~~ 412 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAH-SEIGGQF 412 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS-SSSCTTH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCCee
Confidence 345689999999999999999999999999999997 8888874
No 121
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.36 E-value=2.8e-07 Score=81.88 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=37.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
...||+|||+|++||++|+.|+++|++|+|+||. +.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~-~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERT-SGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CCCCCcc
Confidence 4578999999999999999999999999999997 8888764
No 122
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.35 E-value=2.7e-07 Score=80.91 Aligned_cols=40 Identities=23% Similarity=0.373 Sum_probs=36.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||+. +.+||.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~~GG~~ 41 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKR-GALGGTC 41 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCcCCcC
Confidence 468999999999999999999999999999997 7898864
No 123
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.34 E-value=1.7e-06 Score=74.40 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC--eEEEEecCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV--KSNVFDMGNPDL 99 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~~~~~ 99 (189)
++|+|||||++|+++|..|+++|+ +|+|||++ +..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~-~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDE-KHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCS-SSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCC-CCC
Confidence 689999999999999999999999 89999997 543
No 124
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.33 E-value=4.8e-07 Score=81.49 Aligned_cols=41 Identities=22% Similarity=0.381 Sum_probs=37.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
...||+|||+|++||++|+.|+++|++|+|||+. +.+||..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~-~~~gg~s 165 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKE-PVIGGNA 165 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CCCCCch
Confidence 3579999999999999999999999999999997 8887763
No 125
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.32 E-value=3.1e-07 Score=80.96 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=35.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++||++|+.|+++|++|+|||+ ..+||.+
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk--~~~GG~~ 64 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE--YRIGGTC 64 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES--SCTTHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC--CCCCCce
Confidence 57999999999999999999999999999998 4788864
No 126
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.32 E-value=2.3e-06 Score=74.48 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~~~~ 98 (189)
.++|+|||||++|+++|..|+++|+ +|+|||+. +.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~-~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDA-TV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-CS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECC-CC
Confidence 5789999999999999999999998 79999986 54
No 127
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.31 E-value=5.3e-07 Score=77.12 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=36.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++||++|+.|+++ |++|+|+|+. ..+||..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~-~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAG-VAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESS-SSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCC-CccCCcc
Confidence 57999999999999999999998 9999999997 7777653
No 128
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.31 E-value=1.7e-06 Score=74.67 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCe--EEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVK--SNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~--v~v~e~~~~~~g 100 (189)
++|+|||||++|+++|..|+++|++ |+|||+. +..+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~-~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDE-PHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECS-SSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECC-CCCC
Confidence 5899999999999999999999987 9999997 5544
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.30 E-value=4.8e-07 Score=80.70 Aligned_cols=42 Identities=36% Similarity=0.407 Sum_probs=36.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCC--------CCCcCc
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNP--------DLEGRM 103 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~--------~~gg~~ 103 (189)
...+||+|||||++|+++|..|++.|++|+|||+. + .+||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~-~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFV-TPTPLGTRWGLGGTC 79 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC-CCCTTCCCCCTTCHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecc-CccccccCCCccccc
Confidence 35689999999999999999999999999999984 3 677753
No 130
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.30 E-value=1e-06 Score=75.78 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=33.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
...+|+|||||++|+++|..|...+.+|+|||++ +.++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~-~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSE-KYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSS-SSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECC-CCCC
Confidence 4567999999999999999998889999999997 5544
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.30 E-value=3.1e-07 Score=80.62 Aligned_cols=40 Identities=23% Similarity=0.404 Sum_probs=37.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||+. +.+||.+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~~GG~~ 45 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKN-ETLGGTC 45 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-SSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCcCCcc
Confidence 478999999999999999999999999999997 7899875
No 132
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.29 E-value=3.7e-07 Score=79.94 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|+.|+++|++|+|||+ ..+||.+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk--~~~GG~~ 43 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE--FRYGGTC 43 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES--SCTTHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC--CCCCCcc
Confidence 47899999999999999999999999999998 4788854
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.29 E-value=4.1e-07 Score=79.42 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=36.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
+||+|||||++|+++|..|++.|++|+|||++ +.+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~~GG~~ 40 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKE-KALGGTC 40 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSSHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCC-CCCCCcc
Confidence 58999999999999999999999999999997 7888864
No 134
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.28 E-value=4.7e-07 Score=78.75 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+.++|+|||||++||++|+.|+++|++|+|||+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 3478999999999999999999999999999986
No 135
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.28 E-value=6.6e-07 Score=76.21 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDL 99 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~ 99 (189)
.+|+|||||++||++|+.|+++ |++|+|||+. +.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~-~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKN-DEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS-CTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECC-CCC
Confidence 3799999999999999999999 9999999997 655
No 136
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.28 E-value=1e-06 Score=77.88 Aligned_cols=38 Identities=18% Similarity=0.272 Sum_probs=33.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcC---CeEEEEecCCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRG---VKSNVFDMGNPDLE 100 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g---~~v~v~e~~~~~~g 100 (189)
..++|+|||||++|+++|..|++.| ++|+|||++ +.++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQN-SNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSS-SCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECC-CCCC
Confidence 3579999999999999999999998 999999997 5554
No 137
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.28 E-value=7.2e-07 Score=79.09 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=33.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. +..+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~-~~~~ 39 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQ-DLAC 39 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-STTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECC-CCCC
Confidence 478999999999999999999999999999996 5433
No 138
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.27 E-value=4.8e-07 Score=79.40 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=36.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|+++|++|+|||+. +.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~-~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKR-GKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC-CCcCCcc
Confidence 468999999999999999999999999999997 7888864
No 139
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.26 E-value=4.8e-07 Score=75.84 Aligned_cols=31 Identities=29% Similarity=0.431 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHHcC------CeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRG------VKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g------~~v~v~e~~ 95 (189)
||+|||||++||++|+.|+++| ++|+|+|+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~ 38 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR 38 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECC
Confidence 7999999999999999999998 999999986
No 140
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.26 E-value=8.7e-06 Score=69.38 Aligned_cols=86 Identities=12% Similarity=-0.024 Sum_probs=61.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|+.|+.+|..|++.|.+|+|+|+. +.+..+. .++.+.+.+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~~~~~---------------------~~~~~~~~l~~------- 195 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPC-EQVMPGL---------------------LHPAAAKAVQA------- 195 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSSSTTT---------------------SCHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecC-cchhhcc---------------------cCHHHHHHHHH-------
Confidence 478999999999999999999999999999986 4432211 01122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++.+++++.|.+.+++.+
T Consensus 196 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i 230 (384)
T 2v3a_A 196 --------GLEG--LGVRFHLGPVLASLKKAGEGLEAHLSDGEVI 230 (384)
T ss_dssp --------HHHT--TTCEEEESCCEEEEEEETTEEEEEETTSCEE
T ss_pred --------HHHH--cCCEEEeCCEEEEEEecCCEEEEEECCCCEE
Confidence 2221 3899999999999998888888887766543
No 141
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.26 E-value=7.4e-07 Score=78.04 Aligned_cols=40 Identities=28% Similarity=0.506 Sum_probs=35.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+||+|||||++|+++|+.|++.|++|+|||++ .+||.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~--~~GG~~ 42 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG--TIGGTC 42 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--STTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC--CCCccc
Confidence 3578999999999999999999999999999985 577754
No 142
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.26 E-value=7e-07 Score=75.82 Aligned_cols=41 Identities=22% Similarity=0.305 Sum_probs=36.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~gg~~ 103 (189)
...||+|||+|++||++|+.|+++ |++|+|||+. +.+||..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~-~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS-VAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS-SSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecC-ccccccc
Confidence 346899999999999999999999 9999999997 7887653
No 143
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.26 E-value=1.5e-06 Score=75.23 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=32.8
Q ss_pred CCEEEECCCHHHHHHHHHHHH--cCCeEEEEecCCCCCCc
Q 041557 64 PHVKIIGGGMAVLACALRLDK--RGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~--~g~~v~v~e~~~~~~gg 101 (189)
++|+|||||++|+++|+.|++ .|++|+|||+. +..++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~-~~~~~ 41 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR-PYFGF 41 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS-SEEEC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC-CCCCc
Confidence 689999999999999999999 78999999997 55443
No 144
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.25 E-value=7.2e-07 Score=78.37 Aligned_cols=40 Identities=30% Similarity=0.422 Sum_probs=36.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+||+|||||++|+++|..|++.|++|+|||++ .+||.+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~--~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH--KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC--CCCCcc
Confidence 4589999999999999999999999999999974 778764
No 145
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.25 E-value=7.4e-07 Score=80.24 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=36.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
...||+|||+|++||++|+.|+++|++|+|||+. +.+||.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~-~~~gg~ 159 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKA-PFSGGN 159 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSS-SSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CCCCCc
Confidence 3568999999999999999999999999999997 777765
No 146
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.24 E-value=8.7e-07 Score=80.32 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc------CCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR------GVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~------g~~v~v~e~~~~~~gg~ 102 (189)
..||+|||||++||++|+.|++. |++|+|||+. ..+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~-~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA-AHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSS-SSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCC-CCCCCc
Confidence 57999999999999999999999 9999999997 777654
No 147
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.24 E-value=7.9e-07 Score=80.22 Aligned_cols=40 Identities=25% Similarity=0.459 Sum_probs=35.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..+||+|||||++|+++|+.|+++|++|+|+|++ +..+|.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~-d~~~Gt 56 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMN-DFASGT 56 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-STTCSG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECC-CCCCCc
Confidence 3579999999999999999999999999999997 655543
No 148
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.24 E-value=6.3e-07 Score=79.08 Aligned_cols=41 Identities=34% Similarity=0.421 Sum_probs=35.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEec--------CCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDM--------GNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~--------~~~~~gg~~ 103 (189)
..+||+|||||++|+++|..|++.|++|+|+|+ . ..+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~-~~~GGtc 53 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTK-WGLGGTC 53 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCC-CCTTCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEeccccccccc-CCcCCee
Confidence 357999999999999999999999999999997 3 4678753
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.23 E-value=1e-05 Score=70.58 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=60.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|++|+.+|..|++.|.+|+|+|+. +.+... .++.+.+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~-~~~l~~----------------------~~~~~~~~l~~------- 216 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYM-DRILPT----------------------MDLEVSRAAER------- 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTT----------------------SCHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecC-Cccccc----------------------cCHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432110 11223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++.+++++.+.+.++..
T Consensus 217 --------~l~~--~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~ 250 (455)
T 2yqu_A 217 --------VFKK--QGLTIRTGVRVTAVVPEAKGARVELEGGEV 250 (455)
T ss_dssp --------HHHH--HTCEEECSCCEEEEEEETTEEEEEETTSCE
T ss_pred --------HHHH--CCCEEEECCEEEEEEEeCCEEEEEECCCeE
Confidence 1111 279999999999999888888887765544
No 150
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.22 E-value=7.3e-07 Score=78.96 Aligned_cols=39 Identities=26% Similarity=0.234 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|+|++ .+||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~--~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG--AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS--CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC--CCCCcc
Confidence 479999999999999999999999999999996 488864
No 151
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.22 E-value=6.6e-07 Score=77.54 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~ 95 (189)
...||+|||||++|+++|+.|+++| ++|+|+|+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 4578999999999999999999999 999999993
No 152
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.21 E-value=1e-05 Score=70.83 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=58.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|+.|+.+|..|++.|.+|+|+|+. +.+... .++.+.+.+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~----------------------~~~~~~~~l~~------- 218 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM-PEILPQ----------------------GDPETAALLRR------- 218 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT----------------------SCHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC-Cccccc----------------------cCHHHHHHHHH-------
Confidence 368999999999999999999999999999986 443211 11223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~ 182 (189)
.+.. .|++++++++|++++.+++.+.|.+.
T Consensus 219 --------~l~~--~gV~i~~~~~v~~i~~~~~~~~v~~~ 248 (464)
T 2eq6_A 219 --------ALEK--EGIRVRTKTKAVGYEKKKDGLHVRLE 248 (464)
T ss_dssp --------HHHH--TTCEEECSEEEEEEEEETTEEEEEEE
T ss_pred --------HHHh--cCCEEEcCCEEEEEEEeCCEEEEEEe
Confidence 1211 38999999999999988777777653
No 153
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.21 E-value=3e-06 Score=73.82 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
+||+|||||++|+++|..|++. |++|+|||+. +.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~-~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMN-DNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESS-SCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC-CCCC
Confidence 4799999999999999999998 9999999997 5543
No 154
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.20 E-value=1.1e-06 Score=75.51 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=33.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
..||+|||||++|+++|+.|+++ |++|+|||+. ...+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~-~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG-GLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS-CSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC-CCCC
Confidence 47899999999999999999999 9999999986 4433
No 155
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.19 E-value=1.4e-06 Score=78.74 Aligned_cols=38 Identities=29% Similarity=0.497 Sum_probs=33.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
..||+|||||++|+++|+.|+++|++|+|+|+. +..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~-~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ-DFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-STTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC-CCCCC
Confidence 478999999999999999999999999999996 54443
No 156
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.19 E-value=3.6e-06 Score=74.12 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
.+|+|||||++|+++|..|++. |++|+|||+. +..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~-~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKG-EIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSS-SCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC-CCCC
Confidence 5899999999999999999997 8999999997 5543
No 157
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.19 E-value=9.8e-07 Score=77.48 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=35.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||++ .+||.+
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~--~~GG~~ 42 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK--ALGGTC 42 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC--CCCCcC
Confidence 578999999999999999999999999999985 677764
No 158
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=9.1e-07 Score=77.94 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=36.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||+. +.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERY-KTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-SCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCCce
Confidence 468999999999999999999999999999997 7888764
No 159
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.18 E-value=7.5e-07 Score=78.79 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=35.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc---CCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR---GVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~---g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|+.|++. |++|+|||++ + +||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~-~-~GG~~ 43 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCD-G-IGGAA 43 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS-C-TTHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCC-C-cCCcc
Confidence 36899999999999999999999 9999999997 5 88753
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=8.6e-07 Score=78.09 Aligned_cols=40 Identities=28% Similarity=0.365 Sum_probs=35.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+||+|||||++|+++|..|++.|++|+|||++ .+||.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~--~~GG~~ 49 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK--ALGGTC 49 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS--CTTHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC--CcCCcC
Confidence 3578999999999999999999999999999985 577764
No 161
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.18 E-value=1.3e-06 Score=76.94 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
..+||+|||||++|+++|..|+++|++|+|+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 468999999999999999999999999999994
No 162
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.17 E-value=1.5e-06 Score=77.99 Aligned_cols=37 Identities=32% Similarity=0.363 Sum_probs=33.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..+|+|||||++||++|..|+++|++|+|||+. +.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~-~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQT-DGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCC-CCCC
Confidence 468999999999999999999999999999997 6654
No 163
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1.2e-06 Score=77.59 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=35.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||++ ..||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~--~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS--RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC--CcCccc
Confidence 468999999999999999999999999999996 477764
No 164
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.17 E-value=1.2e-06 Score=77.63 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=35.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-cCCeEEEEe--------cCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-RGVKSNVFD--------MGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e--------~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|+.|++ .|++|+||| +. ..+||.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~-~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHY-AALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTB-SCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccC-CCcCccc
Confidence 4689999999999999999999 999999999 33 5788864
No 165
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=4.2e-06 Score=72.79 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDLE 100 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~g 100 (189)
.||+|||||++|+++|..|++. |++|+|||++ +.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~-~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG-DFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS-SSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECC-CccC
Confidence 3799999999999999999998 9999999997 6554
No 166
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.15 E-value=9.7e-07 Score=77.16 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=35.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||++ .+||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~--~~GG~~ 42 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK--ELGGTC 42 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS--CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC--CCCCcc
Confidence 468999999999999999999999999999985 577764
No 167
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=1.4e-06 Score=76.29 Aligned_cols=40 Identities=25% Similarity=0.368 Sum_probs=36.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
.+||+|||||++|+++|..|++.|++|+|||++ .+||.+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~--~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ--ALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS--CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC--CCCCcCC
Confidence 478999999999999999999999999999984 7888753
No 168
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.14 E-value=1.3e-06 Score=76.96 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=36.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-c------CCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-R------GVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-~------g~~v~v~e~~~~~~gg~~ 103 (189)
.++|+|||||++|+.+|..|++ + |++|+|||+. +.+||.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~-~~~gg~~ 49 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEML-PTPWGLV 49 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESS-SSCSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecC-CCCCCcc
Confidence 4689999999999999999999 7 9999999997 7888753
No 169
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.12 E-value=9.9e-07 Score=78.20 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-cCCeEEEEe--------cCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-RGVKSNVFD--------MGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e--------~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|+.|++ .|++|+||| +. ..+||.+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~-~~~GG~~ 55 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFY-AALGGTC 55 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTB-CBTTHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccC-CCCCCee
Confidence 5789999999999999999999 999999999 33 5788864
No 170
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.12 E-value=1.5e-06 Score=76.28 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=35.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||++ + +||.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~-~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG-E-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-C-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC-C-CCCCC
Confidence 478999999999999999999999999999996 5 88865
No 171
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.12 E-value=2.7e-06 Score=75.93 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=31.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHH---cCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDK---RGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~ 95 (189)
.++|+|||||++|+++|+.|++ .|++|+|||+.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 40 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESA 40 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 5789999999999999999999 99999999985
No 172
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.10 E-value=2.4e-06 Score=78.10 Aligned_cols=41 Identities=29% Similarity=0.290 Sum_probs=36.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+||+|||+|++|+++|+.|++.|++|+|+|+. +..||..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~-~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIG-EIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEecc-CCCCCcc
Confidence 3579999999999999999999999999999997 7777644
No 173
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.10 E-value=3.9e-06 Score=73.22 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC--CeEEEEecCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG--VKSNVFDMGNPDL 99 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~~~~~ 99 (189)
++|+|||||++|+++|..|++.| .+|+|||++ +..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~-~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKD-RDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESS-SCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCC-CCC
Confidence 46999999999999999999998 469999997 543
No 174
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.10 E-value=2e-06 Score=82.20 Aligned_cols=41 Identities=24% Similarity=0.379 Sum_probs=38.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
.+||+|||+|++|+++|..|++.|++|+|||++ +.+||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~-~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDER-AEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCceec
Confidence 468999999999999999999999999999997 88998775
No 175
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.10 E-value=3e-05 Score=67.99 Aligned_cols=83 Identities=19% Similarity=0.080 Sum_probs=60.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+.+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 215 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALE-DRLLFQ------------F----------DPLLSATLAE------- 215 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432211 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKT 185 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~ 185 (189)
.+.. .|++++++++|++++.+++++.|.+.+++
T Consensus 216 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~G~ 248 (463)
T 2r9z_A 216 --------NMHA--QGIETHLEFAVAALERDAQGTTLVAQDGT 248 (463)
T ss_dssp --------HHHH--TTCEEESSCCEEEEEEETTEEEEEETTCC
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEeCCeEEEEEeCCc
Confidence 1211 38999999999999987777888877665
No 176
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.10 E-value=2.1e-06 Score=77.89 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=34.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
..||+|||+|++||++|+.|+++|.+|+|+||. ...+|
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~-~~~~g 44 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKV-FPTRS 44 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CGGGS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC-CCCCC
Confidence 468999999999999999999999999999997 65543
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=2.4e-06 Score=74.54 Aligned_cols=39 Identities=23% Similarity=0.431 Sum_probs=35.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~--~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG--NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC--CCCCcC
Confidence 368999999999999999999999999999985 677764
No 178
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.09 E-value=2.4e-06 Score=75.27 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=36.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~~~~~gg~~ 103 (189)
.++|+|||+|++|+.+|..|+++| ++|+|||+. +.+||.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~-~~~gg~~ 47 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ-LVPFGLV 47 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSS-SSSCTHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCC-CcCCcee
Confidence 468999999999999999999999 999999997 7888654
No 179
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.09 E-value=4.8e-06 Score=71.06 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~ 95 (189)
.|+|+|||||++|+++|.+|++.+ .+|+|+|+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCC
Confidence 578999999999999999999877 589999986
No 180
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=2.6e-05 Score=67.91 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=57.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|+.|+.+|..|++.|.+|+|+|+. +.+... + ++.+.+.+..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 219 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGA-GEILSG------------F----------EKQMAAIIKK------- 219 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 478999999999999999999999999999986 443211 1 1222222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
.+.. .|++++++++|++++.+++++.+.+
T Consensus 220 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~ 248 (455)
T 1ebd_A 220 --------RLKK--KGVEVVTNALAKGAEEREDGVTVTY 248 (455)
T ss_dssp --------HHHH--TTCEEEESEEEEEEEEETTEEEEEE
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEeCCeEEEEE
Confidence 1111 3899999999999998777766654
No 181
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.08 E-value=2.6e-06 Score=76.57 Aligned_cols=38 Identities=42% Similarity=0.506 Sum_probs=33.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
..||+|||+|++||++|+.|++ |.+|+|+|+. ...+|.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~-~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKG-PVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSS-CTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECC-CCCCCC
Confidence 5799999999999999999999 9999999997 665543
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.07 E-value=2.1e-06 Score=75.88 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHH---cCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDK---RGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~ 95 (189)
.++|+|||||++|+++|+.|++ .|++|+|+|+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~ 37 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESG 37 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecC
Confidence 3689999999999999999999 99999999986
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.06 E-value=2.8e-05 Score=68.11 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=56.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+|+. +.+... + ++.+.+.+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 232 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQ-PQIGAS------------M----------DGEVAKATQK------- 232 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSSS------------S----------CHHHHHHHHH-------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 478999999999999999999999999999986 443221 1 1222222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEE--eCCeEEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEP--FNGMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~--~~~~w~l~~~ 182 (189)
.+.. .|++++++++|++++. +++.+.|.+.
T Consensus 233 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~ 264 (478)
T 1v59_A 233 --------FLKK--QGLDFKLSTKVISAKRNDDKNVVEIVVE 264 (478)
T ss_dssp --------HHHH--TTCEEECSEEEEEEEEETTTTEEEEEEE
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEecCCCeEEEEEE
Confidence 1111 3899999999999987 5566666553
No 184
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.06 E-value=2.2e-06 Score=78.36 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=33.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-cCCeEEEEecCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-RGVKSNVFDMGNPDL 99 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e~~~~~~ 99 (189)
..+|+|||||++||++|+.|++ .|++|+|||+. +.+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~-~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQK-EGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSS-SSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCC-CCC
Confidence 5689999999999999999999 99999999996 554
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.06 E-value=3e-05 Score=67.69 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=59.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+.+|..|++.|.+|+|+|+. +.+... + ++.+.+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 216 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMF-DAPLPS------------F----------DPMISETLVE------- 216 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC-Cchhhh------------h----------hHHHHHHHHH-------
Confidence 468999999999999999999999999999986 442211 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe-EEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM-WYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~-w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++.++++ +.|.+.+++.
T Consensus 217 --------~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~ 251 (450)
T 1ges_A 217 --------VMNA--EGPQLHTNAIPKAVVKNTDGSLTLELEDGRS 251 (450)
T ss_dssp --------HHHH--HSCEEECSCCEEEEEECTTSCEEEEETTSCE
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEeCCcEEEEEECCCcE
Confidence 1111 28999999999999876543 7777766543
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.06 E-value=2.2e-06 Score=75.00 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=34.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~--~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK--YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC--CCCCcc
Confidence 368999999999999999999999999999985 567654
No 187
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.06 E-value=3.9e-06 Score=75.21 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH---cCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDK---RGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~ 95 (189)
..++|+|||||++|+++|..|++ .|++|+|||+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCC
Confidence 35789999999999999999999 99999999985
No 188
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.06 E-value=2.9e-06 Score=78.21 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=33.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
..||+|||+|++||++|+.|+++|++|+|+|+. ...+
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~-~~~~ 41 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLI-PVKR 41 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSS-CGGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEecc-CCCC
Confidence 468999999999999999999999999999997 5543
No 189
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.05 E-value=3.5e-06 Score=75.06 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH------------cCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDK------------RGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~------------~g~~v~v~e~~ 95 (189)
..++|+|||||++|+++|..|++ .|++|+|||+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~ 51 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESP 51 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCC
Confidence 35789999999999999999999 99999999985
No 190
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.05 E-value=3e-06 Score=77.54 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=33.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg 101 (189)
..||+|||+|++||++|+.|+++|++|+|+|+. ...+|
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~-~~~~g 55 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKL-FPTRS 55 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CGGGS
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCCCC
Confidence 468999999999999999999999999999996 54443
No 191
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.04 E-value=4.5e-06 Score=78.35 Aligned_cols=36 Identities=39% Similarity=0.535 Sum_probs=32.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~~~~ 98 (189)
...||+|||||++|+++|+.|+++|+ +|+|+|+. ..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~-~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQG-PL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSS-CT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCC-CC
Confidence 35789999999999999999999998 99999997 54
No 192
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.04 E-value=2.7e-05 Score=67.63 Aligned_cols=82 Identities=17% Similarity=0.168 Sum_probs=56.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|++|+.+|..|++.|.+|+|+|+. +.+..+. + ++.+.+.+..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~~-----------~----------~~~~~~~l~~------- 199 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDIL-DRPLGVY-----------L----------DKEFTDVLTE------- 199 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSTTTTT-----------C----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecC-ccccccc-----------C----------CHHHHHHHHH-------
Confidence 578999999999999999999999999999986 5433210 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENG 183 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~ 183 (189)
.+.. .|++++++++|++++.++..+.+.+++
T Consensus 200 --------~l~~--~gv~i~~~~~v~~i~~~~~v~~v~~~~ 230 (447)
T 1nhp_A 200 --------EMEA--NNITIATGETVERYEGDGRVQKVVTDK 230 (447)
T ss_dssp --------HHHT--TTEEEEESCCEEEEECSSBCCEEEESS
T ss_pred --------HHHh--CCCEEEcCCEEEEEEccCcEEEEEECC
Confidence 2221 389999999999998653334455543
No 193
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.01 E-value=2.9e-05 Score=68.22 Aligned_cols=81 Identities=21% Similarity=0.223 Sum_probs=58.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+|+. +.+... + ++.+.+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 234 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMM-DGLMQG------------A----------DRDLVKVWQK------- 234 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 578999999999999999999999999999986 432211 1 2223332222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENG 183 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~ 183 (189)
.+.. .|++++++++|++++.++++..|.+.+
T Consensus 235 --------~l~~--~gV~i~~~~~v~~i~~~~~~~~v~~~~ 265 (482)
T 1ojt_A 235 --------QNEY--RFDNIMVNTKTVAVEPKEDGVYVTFEG 265 (482)
T ss_dssp --------HHGG--GEEEEECSCEEEEEEEETTEEEEEEES
T ss_pred --------HHHh--cCCEEEECCEEEEEEEcCCeEEEEEec
Confidence 1211 389999999999999877776666543
No 194
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.01 E-value=3.4e-06 Score=76.22 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
..+||+|||||++||++|..|+++|++|+|||+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 457899999999999999999999999999997
No 195
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.00 E-value=4.4e-06 Score=76.05 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=33.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecCCCCCCc
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMGNPDLEG 101 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~~~~~gg 101 (189)
..||+|||+|++||++|+.|++.| .+|+|+|+. ...+|
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~-~~~~~ 44 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV-YPMRS 44 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESS-CGGGS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCC-CCCCC
Confidence 468999999999999999999999 999999996 55443
No 196
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.00 E-value=4.8e-06 Score=73.48 Aligned_cols=31 Identities=29% Similarity=0.479 Sum_probs=29.9
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
||+|||+|++||++|+.|++.|++|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 6999999999999999999999999999995
No 197
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=5.8e-05 Score=66.05 Aligned_cols=79 Identities=8% Similarity=0.036 Sum_probs=56.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+|+. +.+..+. + ++.+.+.+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~~-----------~----------~~~~~~~l~~------- 228 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFL-GHVGGVG-----------I----------DMEISKNFQR------- 228 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSCSS-----------C----------CHHHHHHHHH-------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEecc-CccCCcc-----------c----------CHHHHHHHHH-------
Confidence 478999999999999999999999999999986 4432210 1 1222222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe-EEEE
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM-WYLG 180 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~-w~l~ 180 (189)
.+.. .|++++++++|++++.++++ +.|.
T Consensus 229 --------~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~ 257 (474)
T 1zmd_A 229 --------ILQK--QGFKFKLNTKVTGATKKSDGKIDVS 257 (474)
T ss_dssp --------HHHH--TTCEEECSEEEEEEEECTTSCEEEE
T ss_pred --------HHHH--CCCEEEeCceEEEEEEcCCceEEEE
Confidence 1211 38999999999999987665 7765
No 198
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.94 E-value=7e-06 Score=75.54 Aligned_cols=35 Identities=29% Similarity=0.313 Sum_probs=32.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-----RGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-----~g~~v~v~e~~~~~ 98 (189)
..+|+||||||+||++|..|++ .|++|+|||+. +.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~-~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR-ST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS-SS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC-CC
Confidence 4689999999999999999999 99999999985 44
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.93 E-value=7.3e-05 Score=65.30 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 223 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFA-PRCAPT------------L----------DEDVTNALVG------- 223 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecC-Cccccc------------C----------CHHHHHHHHH-------
Confidence 478999999999999999999999999999986 432211 1 1223222222
Q ss_pred cCchHHHHHH-hccCCCcEEEeCceeEEEEEeCCeEEEEeC
Q 041557 143 LGYSKSQNLN-IFQTSKVNVVRTCWISNLEPFNGMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l-~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~ 182 (189)
.+ .. .|++++++++|++++.+++++.+.+.
T Consensus 224 --------~l~~~--~gv~i~~~~~v~~i~~~~~~~~v~~~ 254 (468)
T 2qae_A 224 --------ALAKN--EKMKFMTSTKVVGGTNNGDSVSLEVE 254 (468)
T ss_dssp --------HHHHH--TCCEEECSCEEEEEEECSSSEEEEEE
T ss_pred --------HHhhc--CCcEEEeCCEEEEEEEcCCeEEEEEE
Confidence 22 11 38999999999999987766766653
No 200
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.93 E-value=1.1e-05 Score=70.55 Aligned_cols=38 Identities=29% Similarity=0.456 Sum_probs=33.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
+||+|||||++|+.+|+.|+++|++|+|+|+. +..+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~-~~~~tp 39 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMR-PKRMTP 39 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCT-TTSCCS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEecc-CCcCCc
Confidence 58999999999999999999999999999986 654433
No 201
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.92 E-value=9.1e-06 Score=74.59 Aligned_cols=33 Identities=33% Similarity=0.531 Sum_probs=31.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+||+|||||++|+.+|+.|++.|.+|+|+|+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~ 59 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLN 59 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEec
Confidence 579999999999999999999999999999986
No 202
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.92 E-value=7.8e-05 Score=65.77 Aligned_cols=84 Identities=10% Similarity=0.048 Sum_probs=60.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 231 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQ-DHVLPY------------E----------DADAALVLEE------- 231 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSS-SSSSCC------------S----------SHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 478999999999999999999999999999986 432211 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++.+++++.|.+.++..
T Consensus 232 --------~l~~--~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~ 265 (499)
T 1xdi_A 232 --------SFAE--RGVRLFKNARAASVTRTGAGVLVTMTDGRT 265 (499)
T ss_dssp --------HHHH--TTCEEETTCCEEEEEECSSSEEEEETTSCE
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEeCCEEEEEECCCcE
Confidence 1111 389999999999999877677777666544
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.91 E-value=8.3e-05 Score=65.64 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=59.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc---CCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR---GVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKV 139 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~---g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 139 (189)
.++++|||+|..|+-+|..|++. |.+|+|+++. +.+... + ++.+.+.+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~---- 239 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRG-DMILRG------------F----------DSELRKQLTE---- 239 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESS-SSSSTT------------S----------CHHHHHHHHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcC-CCcccc------------c----------CHHHHHHHHH----
Confidence 46899999999999999999999 9999999986 432211 1 1223222222
Q ss_pred hhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCC-eEEEEeCCeee
Q 041557 140 VLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNG-MWYLGENGKTA 186 (189)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~-~w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++.+++ .+.|.+.+++.
T Consensus 240 -----------~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 274 (490)
T 1fec_A 240 -----------QLRA--NGINVRTHENPAKVTKNADGTRHVVFESGAE 274 (490)
T ss_dssp -----------HHHH--TTEEEEETCCEEEEEECTTSCEEEEETTSCE
T ss_pred -----------HHHh--CCCEEEeCCEEEEEEEcCCCEEEEEECCCcE
Confidence 1111 3899999999999987654 47777766543
No 204
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=9e-05 Score=65.11 Aligned_cols=82 Identities=16% Similarity=0.162 Sum_probs=57.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 234 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG-ETVLRK------------F----------DECIQNTITD------- 234 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS-SSSCTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432111 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe--EEEEeCCe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM--WYLGENGK 184 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~--w~l~~~~~ 184 (189)
.+.. .|++++++++|++++..+++ ..|.+.++
T Consensus 235 --------~l~~--~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G 268 (479)
T 2hqm_A 235 --------HYVK--EGINVHKLSKIVKVEKNVETDKLKIHMNDS 268 (479)
T ss_dssp --------HHHH--HTCEEECSCCEEEEEECC-CCCEEEEETTS
T ss_pred --------HHHh--CCeEEEeCCEEEEEEEcCCCcEEEEEECCC
Confidence 1111 28999999999999876544 67777665
No 205
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.90 E-value=9.8e-06 Score=74.69 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc------CCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR------GVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~------g~~v~v~e~~ 95 (189)
..||+|||+|++||++|+.|+++ |.+|+|+||.
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 57999999999999999999998 9999999996
No 206
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.90 E-value=8e-06 Score=75.15 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+||+|||||++|+++|+.|++.|.+|+|+|+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~ 60 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHN 60 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeec
Confidence 3579999999999999999999999999999986
No 207
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=7.8e-05 Score=65.93 Aligned_cols=84 Identities=13% Similarity=0.224 Sum_probs=59.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 225 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARG-NRILRK------------F----------DESVINVLEN------- 225 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSS-SSSCTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecC-CccCcc------------c----------chhhHHHHHH-------
Confidence 568999999999999999999999999999986 432211 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCC-eEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNG-MWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~-~w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++..++ .+.|.+.+++.
T Consensus 226 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~ 260 (500)
T 1onf_A 226 --------DMKK--NNINIVTFADVVEIKKVSDKNLSIHLSDGRI 260 (500)
T ss_dssp --------HHHH--TTCEEECSCCEEEEEESSTTCEEEEETTSCE
T ss_pred --------HHHh--CCCEEEECCEEEEEEEcCCceEEEEECCCcE
Confidence 1211 3899999999999987643 47777666543
No 208
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.90 E-value=5.2e-05 Score=65.26 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=60.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
..++|+|||+|..|+-+|..|++.|.+|+++++. +.+..+. + ++.+.+.+.+
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~-~~~l~~~-----------~----------~~~~~~~l~~------ 193 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAG-DELLVRV-----------L----------GRRIGAWLRG------ 193 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSHHH-----------H----------CHHHHHHHHH------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecC-Cccchhh-----------c----------CHHHHHHHHH------
Confidence 3578999999999999999999999999999986 4322110 0 1122222222
Q ss_pred hcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 142 LLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++.++..+.|.+.+++.+
T Consensus 194 ---------~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i 228 (410)
T 3ef6_A 194 ---------LLTE--LGVQVELGTGVVGFSGEGQLEQVMASDGRSF 228 (410)
T ss_dssp ---------HHHH--HTCEEECSCCEEEEECSSSCCEEEETTSCEE
T ss_pred ---------HHHH--CCCEEEeCCEEEEEeccCcEEEEEECCCCEE
Confidence 1111 2899999999999987665556777666544
No 209
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.89 E-value=1.1e-05 Score=73.91 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHH---H-cCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLD---K-RGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~---~-~g~~v~v~e~~ 95 (189)
...||+|||||++||++|+.|+ + +|.+|+|+||.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~ 58 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 58 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCc
Confidence 3579999999999999999999 6 89999999997
No 210
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.88 E-value=6.1e-05 Score=65.80 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=32.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
.++|+|||+|++|+.+|..|++.|.+|+|+|+. +.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR-ER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS-SS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC-Cc
Confidence 468999999999999999999999999999986 44
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.88 E-value=0.00013 Score=63.53 Aligned_cols=83 Identities=18% Similarity=0.065 Sum_probs=59.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+..+. + ++.+.+.+..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~~-----------~----------d~~~~~~l~~------- 197 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESL-ENLLPKY-----------F----------DKEMVAEVQK------- 197 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSSSTTT-----------C----------CHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEcc-Ccccccc-----------C----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 4322110 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGK 184 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~ 184 (189)
.+.. .|++++++++|++++..++++.|.++++
T Consensus 198 --------~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g 229 (452)
T 3oc4_A 198 --------SLEK--QAVIFHFEETVLGIEETANGIVLETSEQ 229 (452)
T ss_dssp --------HHHT--TTEEEEETCCEEEEEECSSCEEEEESSC
T ss_pred --------HHHH--cCCEEEeCCEEEEEEccCCeEEEEECCC
Confidence 1211 3899999999999997777777776654
No 212
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.88 E-value=0.00015 Score=62.34 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=32.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
.++|+|||+|..|+-+|..|++.|.+|+++++. +.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQ-PR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC-Cc
Confidence 578999999999999999999999999999986 44
No 213
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.87 E-value=0.00015 Score=64.42 Aligned_cols=82 Identities=10% Similarity=0.021 Sum_probs=59.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhhc
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLLL 143 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~ 143 (189)
++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~-------- 263 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRT-EPLKLI------------K----------DNETRAYVLD-------- 263 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CTTTTC------------C----------SHHHHHHHHH--------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEec-Cccccc------------c----------cHHHHHHHHH--------
Confidence 78999999999999999999999999999986 432211 1 1122222222
Q ss_pred CchHHHHHHhccCCCcEEEeCceeEEEEEeCCe----EEEEeCCee
Q 041557 144 GYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM----WYLGENGKT 185 (189)
Q Consensus 144 ~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~----w~l~~~~~~ 185 (189)
.+.. .|++++++++|++++..+++ +.|.+.+++
T Consensus 264 -------~l~~--~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~ 300 (523)
T 1mo9_A 264 -------RMKE--QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE 300 (523)
T ss_dssp -------HHHH--TTCEEESSCEEEEEEECTTSBEEEEEEEETTEE
T ss_pred -------HHHh--CCcEEEECCEEEEEEEcCCCceEEEEEEECCCc
Confidence 1211 38999999999999976555 788887775
No 214
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.86 E-value=0.00014 Score=62.38 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=59.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+-.+. .++.+.+.+...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~-~~~l~~~---------------------~~~~~~~~l~~~------ 203 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEAL-PRVLARV---------------------AGEALSEFYQAE------ 203 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSTTTTT---------------------SCHHHHHHHHHH------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecC-Cchhhhh---------------------cCHHHHHHHHHH------
Confidence 568999999999999999999999999999986 4432210 011222222221
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe-EEEEeCCeeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM-WYLGENGKTAW 187 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~-w~l~~~~~~~~ 187 (189)
+.. .|++++++++|+.++.+++. ..|.+.+++.+
T Consensus 204 ---------l~~--~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i 238 (415)
T 3lxd_A 204 ---------HRA--HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVI 238 (415)
T ss_dssp ---------HHH--TTCEEEETCCEEEEEESSSBEEEEEESSSCEE
T ss_pred ---------HHh--CCCEEEECCEEEEEEecCCcEEEEEeCCCCEE
Confidence 111 38999999999999886654 35666666544
No 215
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.85 E-value=0.0002 Score=61.35 Aligned_cols=86 Identities=13% Similarity=0.173 Sum_probs=59.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|.+.|.+|+++++. +.+..+. + ++.+.+.+..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~-~~~~~~~-----------~----------~~~~~~~l~~------- 192 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELA-PRVMARV-----------V----------TPEISSYFHD------- 192 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSTTTTT-----------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC-Ccchhhc-----------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 4432111 0 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe-EEEEeCCeeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM-WYLGENGKTAW 187 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~-w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++.+++. ..|.+.+++.+
T Consensus 193 --------~l~~--~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i 228 (404)
T 3fg2_P 193 --------RHSG--AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTL 228 (404)
T ss_dssp --------HHHH--TTCEEECSCCEEEEEEETTEEEEEEETTSCEE
T ss_pred --------HHHh--CCcEEEECCEEEEEEecCCcEEEEEeCCCCEE
Confidence 1111 38999999999999887664 45777666544
No 216
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.85 E-value=1.7e-05 Score=68.32 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=32.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCe--EEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVK--SNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~--v~v~e~~~~~~ 99 (189)
..++|+|||||++|+++|..|+++|++ |+|||+. +.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~-~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDE-AER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESS-CSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECC-CCC
Confidence 357899999999999999999999985 9999996 543
No 217
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.85 E-value=1.1e-05 Score=74.05 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=34.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCC-CCCc
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNP-DLEG 101 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~-~~gg 101 (189)
..+||+|||||++|+++|+.|++.|.+|+|+|+. . .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~-~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSD-LSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESC-GGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEec-ccccCC
Confidence 4579999999999999999999999999999986 4 3444
No 218
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.84 E-value=1.1e-05 Score=72.07 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|++|||+|++|+.+|.+|++.|++|+|+|++
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g 39 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERG 39 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4679999999999999999999999999999997
No 219
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.84 E-value=6.5e-05 Score=65.49 Aligned_cols=79 Identities=10% Similarity=0.080 Sum_probs=56.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~-~~~l~~------------~----------~~~~~~~l~~------- 226 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFA-SEIVPT------------M----------DAEIRKQFQR------- 226 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC-Cccccc------------c----------cHHHHHHHHH-------
Confidence 478999999999999999999999999999986 433211 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
.+.. .|++++++++|++++.+++++.|.+
T Consensus 227 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~ 255 (470)
T 1dxl_A 227 --------SLEK--QGMKFKLKTKVVGVDTSGDGVKLTV 255 (470)
T ss_dssp --------HHHH--SSCCEECSEEEEEEECSSSSEEEEE
T ss_pred --------HHHH--cCCEEEeCCEEEEEEEcCCeEEEEE
Confidence 1211 3899999999999987666666654
No 220
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.84 E-value=0.00013 Score=64.43 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=59.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc---CCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR---GVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKV 139 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~---g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 139 (189)
.++++|||+|..|+-+|..|++. |.+|+|+++. +.+-.. + ++.+.+.+.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~---- 243 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRN-NLILRG------------F----------DETIREEVTK---- 243 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS-SSSCTT------------S----------CHHHHHHHHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcC-Cccccc------------c----------CHHHHHHHHH----
Confidence 46899999999999999999999 9999999986 432111 1 1223222222
Q ss_pred hhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCC-eEEEEeCCeee
Q 041557 140 VLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNG-MWYLGENGKTA 186 (189)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~-~w~l~~~~~~~ 186 (189)
.+.. .|++++++++|++++.+++ .+.|.+.+++.
T Consensus 244 -----------~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 278 (495)
T 2wpf_A 244 -----------QLTA--NGIEIMTNENPAKVSLNTDGSKHVTFESGKT 278 (495)
T ss_dssp -----------HHHH--TTCEEEESCCEEEEEECTTSCEEEEETTSCE
T ss_pred -----------HHHh--CCCEEEeCCEEEEEEEcCCceEEEEECCCcE
Confidence 1211 3899999999999987654 47777766543
No 221
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.84 E-value=0.00017 Score=62.59 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+++. +.+..+. .++.+.+.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~-~~~l~~~---------------------~~~~~~~~l~~------- 199 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTA-ARVLERV---------------------TAPPVSAFYEH------- 199 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSTTTTT---------------------SCHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC-Cccccch---------------------hhHHHHHHHHH-------
Confidence 578999999999999999999999999999986 4432210 01122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEE--eCCe-EEEEeCCeeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEP--FNGM-WYLGENGKTAW 187 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~--~~~~-w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++. +++. +.|.+.++..+
T Consensus 200 --------~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i 237 (431)
T 1q1r_A 200 --------LHRE--AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRL 237 (431)
T ss_dssp --------HHHH--HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEE
T ss_pred --------HHHh--CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEE
Confidence 1111 2899999999999987 4444 46766665443
No 222
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.83 E-value=1.5e-05 Score=67.88 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~ 95 (189)
.++|+|||||++|+++|..|+++| .+|+|+|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 478999999999999999999999 468999986
No 223
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.83 E-value=0.00015 Score=64.49 Aligned_cols=33 Identities=24% Similarity=0.545 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 183 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELA 183 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcC
Confidence 468999999999999999999999999999986
No 224
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.83 E-value=1.2e-05 Score=72.56 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|++|||+|++|+.+|..+++.|.+|+|+|+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~ 74 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYV 74 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 589999999999999999999999999999964
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.83 E-value=0.00018 Score=62.77 Aligned_cols=81 Identities=19% Similarity=0.215 Sum_probs=59.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+.. + ++.+.+.+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~-------------~----------~~~~~~~l~~------- 224 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARN-TLFFR-------------E----------DPAIGEAVTA------- 224 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CTTTT-------------S----------CHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEEC-CccCC-------------C----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 33211 0 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGK 184 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~ 184 (189)
.+.. .|++++++++|++++.+++.+.|.++++
T Consensus 225 --------~l~~--~Gv~i~~~~~v~~i~~~~~~~~v~~~~~ 256 (467)
T 1zk7_A 225 --------AFRA--EGIEVLEHTQASQVAHMDGEFVLTTTHG 256 (467)
T ss_dssp --------HHHH--TTCEEETTCCEEEEEEETTEEEEEETTE
T ss_pred --------HHHh--CCCEEEcCCEEEEEEEeCCEEEEEECCc
Confidence 1211 3899999999999998888888877653
No 226
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.83 E-value=0.00011 Score=66.13 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=60.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||||..|+-.|..+++.|.+|+|+++. .. +. .+ ++++...+..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~---------L~----~~----------D~ei~~~l~~------- 271 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IV---------LR----GF----------DQQCAVKVKL------- 271 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CS---------ST----TS----------CHHHHHHHHH-------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-cc---------cc----cc----------chhHHHHHHH-------
Confidence 467999999999999999999999999999875 21 10 01 2223332222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
.|.. .|+++++++.|..++..++...|...++..
T Consensus 272 --------~l~~--~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~ 305 (542)
T 4b1b_A 272 --------YMEE--QGVMFKNGILPKKLTKMDDKILVEFSDKTS 305 (542)
T ss_dssp --------HHHH--TTCEEEETCCEEEEEEETTEEEEEETTSCE
T ss_pred --------HHHh--hcceeecceEEEEEEecCCeEEEEEcCCCe
Confidence 1111 389999999999999999988887766544
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.82 E-value=0.00013 Score=63.58 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=56.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 220 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFL-PRALPN------------E----------DADVSKEIEK------- 220 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432111 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
.+.. .|++++++++|++++.+++...+.+
T Consensus 221 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~ 249 (464)
T 2a8x_A 221 --------QFKK--LGVTILTATKVESIADGGSQVTVTV 249 (464)
T ss_dssp --------HHHH--HTCEEECSCEEEEEEECSSCEEEEE
T ss_pred --------HHHH--cCCEEEeCcEEEEEEEcCCeEEEEE
Confidence 1111 2899999999999987766666654
No 228
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.82 E-value=0.00015 Score=63.32 Aligned_cols=86 Identities=19% Similarity=0.175 Sum_probs=60.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
.++++|||+|..|+-+|..|++. |.+|+++++. +.+..+. + ++.+.+.+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~-~~~l~~~-----------~----------~~~~~~~l~~------ 210 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELA-DQIMPGF-----------T----------SKSLSQMLRH------ 210 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSS-SSSSTTT-----------S----------CHHHHHHHHH------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEcc-Ccccccc-----------c----------CHHHHHHHHH------
Confidence 56899999999999999999999 9999999986 4322110 1 1223222222
Q ss_pred hcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 142 LLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++.+++.+++.+.+++.+
T Consensus 211 ---------~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i 245 (472)
T 3iwa_A 211 ---------DLEK--NDVVVHTGEKVVRLEGENGKVARVITDKRTL 245 (472)
T ss_dssp ---------HHHH--TTCEEECSCCEEEEEESSSBEEEEEESSCEE
T ss_pred ---------HHHh--cCCEEEeCCEEEEEEccCCeEEEEEeCCCEE
Confidence 1111 3899999999999998777776766555443
No 229
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.81 E-value=1.1e-05 Score=71.36 Aligned_cols=34 Identities=29% Similarity=0.419 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-cCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDK-RGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e~~ 95 (189)
+.+|++|||+|.+|+.+|.+|++ .|++|+|+|++
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG 50 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAG 50 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 47899999999999999999998 67999999997
No 230
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.80 E-value=1.6e-05 Score=70.44 Aligned_cols=38 Identities=32% Similarity=0.532 Sum_probs=33.0
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMGNPDL 99 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~~~~~ 99 (189)
+..++|+|||||++|+++|..|++. |.+|+|||++ +.+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~-~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSED-PEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS-SSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCC-CCC
Confidence 3457899999999999999999887 8899999997 544
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=1.6e-05 Score=67.69 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..+|+|||||++|+++|..|++.| +|+|+|++ +.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~-~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE-PV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS-SS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECC-CC
Confidence 468999999999999999999999 99999986 43
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.79 E-value=0.00013 Score=64.11 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=56.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|++|+.+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 235 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERN-DHIGTI------------Y----------DGDMAEYIYK------- 235 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCG-GGTTSS------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC-Cchhhc------------C----------CHHHHHHHHH-------
Confidence 578999999999999999999999999999986 433211 1 1222222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENG 183 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~ 183 (189)
.+.. .|++++++++|++++.+++.+.+.+++
T Consensus 236 --------~l~~--~Gv~i~~~~~v~~i~~~~~v~~v~~~~ 266 (480)
T 3cgb_A 236 --------EADK--HHIEILTNENVKAFKGNERVEAVETDK 266 (480)
T ss_dssp --------HHHH--TTCEEECSCCEEEEEESSBEEEEEETT
T ss_pred --------HHHH--cCcEEEcCCEEEEEEcCCcEEEEEECC
Confidence 1211 389999999999998754445565554
No 233
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.78 E-value=0.00016 Score=63.54 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=61.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~-~~~l~~------------~----------~~~~~~~l~~------- 240 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRG-DLILRN------------F----------DYDLRQLLND------- 240 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 568999999999999999999999999999986 432110 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
.+.. .|++++++++|++++.+++++.|.+.+++.+
T Consensus 241 --------~l~~--~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i 275 (484)
T 3o0h_A 241 --------AMVA--KGISIIYEATVSQVQSTENCYNVVLTNGQTI 275 (484)
T ss_dssp --------HHHH--HTCEEESSCCEEEEEECSSSEEEEETTSCEE
T ss_pred --------HHHH--CCCEEEeCCEEEEEEeeCCEEEEEECCCcEE
Confidence 1111 2899999999999998888888888776443
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.77 E-value=1.7e-05 Score=68.80 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=31.5
Q ss_pred CCEEEECCCHHHHHHHHHHHH---cCCeEEEEecCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDK---RGVKSNVFDMGNPD 98 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~---~g~~v~v~e~~~~~ 98 (189)
++|+|||||++|+++|..|++ .|++|+|||+. +.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~-~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAN-DY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSS-SE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCC-CC
Confidence 689999999999999999999 89999999986 54
No 235
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.77 E-value=0.00018 Score=63.47 Aligned_cols=78 Identities=13% Similarity=0.042 Sum_probs=56.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 223 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRS-GSVANL------------Q----------DEEMKRYAEK------- 223 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCT-TCCTTC------------C----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC-Cccccc------------C----------CHHHHHHHHH-------
Confidence 578999999999999999999999999999986 443211 1 1123222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGE 181 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~ 181 (189)
.+.. .++++++++|+.++..+++..+.+
T Consensus 224 --------~l~~---~V~i~~~~~v~~i~~~~~~v~v~~ 251 (492)
T 3ic9_A 224 --------TFNE---EFYFDAKARVISTIEKEDAVEVIY 251 (492)
T ss_dssp --------HHHT---TSEEETTCEEEEEEECSSSEEEEE
T ss_pred --------HHhh---CcEEEECCEEEEEEEcCCEEEEEE
Confidence 2222 389999999999998777776765
No 236
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.76 E-value=2.2e-05 Score=68.11 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=29.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG--VKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~ 95 (189)
.++|+|||||++|+++|..|++.+ ++|+|+|+.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 367999999999999999999876 789999986
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.73 E-value=9.2e-05 Score=61.77 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=57.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhh
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVL 141 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 141 (189)
+.++|+|||+|.+|+-+|..|++.|.+|+++++. +.+... . ++... ...+.+.+.+.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~-~~~~~~----~-------~d~~~----~~~~~~~~~l~------- 221 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTST-TGLNDP----D-------ADPSV----RLSPYTRQRLG------- 221 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------CTT----SCCHHHHHHHH-------
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecC-CCCCCC----C-------CCCCc----cCCHHHHHHHH-------
Confidence 3568999999999999999999999999999986 332110 0 11100 00111212211
Q ss_pred hcCchHHHHHHhccCCC-cEEEeCceeEEEEEeCCeEEEEeCCeee
Q 041557 142 LLGYSKSQNLNIFQTSK-VNVVRTCWISNLEPFNGMWYLGENGKTA 186 (189)
Q Consensus 142 ~~~~~~~~~~l~~~~~~-v~v~~~t~V~~i~~~~~~w~l~~~~~~~ 186 (189)
+.+.. .| ++++++++|+.++..++.+.|.+.+++.
T Consensus 222 --------~~l~~--~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~ 257 (369)
T 3d1c_A 222 --------NVIKQ--GARIEMNVHYTVKDIDFNNGQYHISFDSGQS 257 (369)
T ss_dssp --------HHHHT--TCCEEEECSCCEEEEEEETTEEEEEESSSCC
T ss_pred --------HHHhh--CCcEEEecCcEEEEEEecCCceEEEecCCeE
Confidence 12221 35 9999999999998777777777666543
No 238
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.73 E-value=0.00032 Score=60.89 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=55.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+|+++. +.+..+. + ++.+.+.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~~-----------~----------~~~~~~~l~~------- 199 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGH-ERVLYKY-----------F----------DKEFTDILAK------- 199 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESS-SSTTTTT-----------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcC-Cchhhhh-----------h----------hhhHHHHHHH-------
Confidence 467999999999999999999999999999986 4332110 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEE-EEe
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWY-LGE 181 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~-l~~ 181 (189)
.+.. .|++++++++|++++..++... +.+
T Consensus 200 --------~l~~--~Gv~i~~~~~v~~i~~~~~~v~~v~~ 229 (452)
T 2cdu_A 200 --------DYEA--HGVNLVLGSKVAAFEEVDDEIITKTL 229 (452)
T ss_dssp --------HHHH--TTCEEEESSCEEEEEEETTEEEEEET
T ss_pred --------HHHH--CCCEEEcCCeeEEEEcCCCeEEEEEe
Confidence 1211 3899999999999987666554 444
No 239
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.73 E-value=0.00027 Score=61.73 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=57.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 229 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAM-DKFLPA------------V----------DEQVAKEAQK------- 229 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecC-CCcCcc------------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432111 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~ 182 (189)
.+.. .|++++++++|++++.+++...+.+.
T Consensus 230 --------~l~~--~Gv~v~~~~~v~~i~~~~~~~~v~~~ 259 (476)
T 3lad_A 230 --------ILTK--QGLKILLGARVTGTEVKNKQVTVKFV 259 (476)
T ss_dssp --------HHHH--TTEEEEETCEEEEEEECSSCEEEEEE
T ss_pred --------HHHh--CCCEEEECCEEEEEEEcCCEEEEEEE
Confidence 1111 38999999999999987776666543
No 240
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.73 E-value=0.00023 Score=62.69 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~ 226 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVV 226 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence 3578999999999999999999999999999986
No 241
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.68 E-value=0.00033 Score=61.53 Aligned_cols=80 Identities=11% Similarity=0.111 Sum_probs=57.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+++. +.+... + ++.+.+.+.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~l~~------- 247 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFL-DTILGG------------M----------DGEVAKQLQR------- 247 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS-SSSSSS------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecc-cccccc------------C----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432211 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~ 182 (189)
.+.. .|++++++++|+.++..++.+.+.+.
T Consensus 248 --------~l~~--~gV~v~~~~~v~~i~~~~~~~~v~~~ 277 (491)
T 3urh_A 248 --------MLTK--QGIDFKLGAKVTGAVKSGDGAKVTFE 277 (491)
T ss_dssp --------HHHH--TTCEEECSEEEEEEEEETTEEEEEEE
T ss_pred --------HHHh--CCCEEEECCeEEEEEEeCCEEEEEEE
Confidence 1111 38999999999999988887776553
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.66 E-value=3.2e-05 Score=68.77 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||||++|+.+|..|++.+++|+|+|+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 4568999999999999999999999999999985
No 243
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.59 E-value=0.00033 Score=61.05 Aligned_cols=83 Identities=16% Similarity=0.150 Sum_probs=58.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~-~~~l~~------------~----------~~~~~~~l~~------- 219 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRG-KEILSR------------F----------DQDMRRGLHA------- 219 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSSTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 568999999999999999999999999999986 432110 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe-EEEE-eCCee
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM-WYLG-ENGKT 185 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~-w~l~-~~~~~ 185 (189)
.+.. .|++++++++|++++.++++ +.|. +.+++
T Consensus 220 --------~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~ 254 (463)
T 4dna_A 220 --------AMEE--KGIRILCEDIIQSVSADADGRRVATTMKHGE 254 (463)
T ss_dssp --------HHHH--TTCEEECSCCEEEEEECTTSCEEEEESSSCE
T ss_pred --------HHHH--CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe
Confidence 1211 38999999999999987554 6777 66654
No 244
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.59 E-value=2.6e-05 Score=69.92 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=32.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..+|++|||+|.+|+.+|.+|++ |.+|+|+|++ ...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG-~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERG-SLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSS-BCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecC-CCc
Confidence 45899999999999999999999 9999999998 554
No 245
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.56 E-value=9e-05 Score=68.17 Aligned_cols=46 Identities=20% Similarity=0.191 Sum_probs=42.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeee
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMI 108 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~ 108 (189)
..+|++|+|+|+.|...|..|++.|++|+++|+. +..||.+.+..+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~-~~~gg~~~~~~l 52 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSR-SYYGGNWASFSF 52 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-SSSCGGGCEECH
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCC-CcccCccccccH
Confidence 4689999999999999999999999999999997 999999876544
No 246
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.56 E-value=0.00019 Score=62.16 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc--CCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR--GVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++. |.+|+++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~ 261 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRA 261 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeC
Confidence 467899999999999999999999 8999999986
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.55 E-value=0.00064 Score=59.43 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=56.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------d~~~~~~~~~------- 236 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRH-DKVLRS------------F----------DSMISTNCTE------- 236 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTT------------S----------CHHHHHHHHH-------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeC-Cccccc------------c----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432110 1 1223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCe--EEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGM--WYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~--w~l~~~ 182 (189)
.+.. .|++++++++|++++..+++ ..|.+.
T Consensus 237 --------~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~ 268 (478)
T 3dk9_A 237 --------ELEN--AGVEVLKFSQVKEVKKTLSGLEVSMVTA 268 (478)
T ss_dssp --------HHHH--TTCEEETTEEEEEEEECSSSEEEEEEEC
T ss_pred --------HHHH--CCCEEEeCCEEEEEEEcCCCcEEEEEEc
Confidence 1111 38999999999999876554 556554
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.53 E-value=0.00047 Score=60.90 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=58.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHH----cCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDK----RGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWK 138 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~----~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 138 (189)
.++|+|||+|..|+-+|..|++ .|.+|+++++. +.+.++. + .+.+.+.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~-~~~~~~~-----------l----------~~~~~~~~~---- 233 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPE-KGNMGKI-----------L----------PEYLSNWTM---- 233 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSS-SSTTTTT-----------S----------CHHHHHHHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecC-ccccccc-----------C----------CHHHHHHHH----
Confidence 5789999999999999999987 47889999875 4322111 0 011222111
Q ss_pred hhhhcCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEEEEeCCeeee
Q 041557 139 VVLLLGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWYLGENGKTAW 187 (189)
Q Consensus 139 ~~~~~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~l~~~~~~~~ 187 (189)
+.+.. .||+++++++|+.++..++...|.+.+++.+
T Consensus 234 -----------~~l~~--~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i 269 (493)
T 1m6i_A 234 -----------EKVRR--EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKV 269 (493)
T ss_dssp -----------HHHHT--TTCEEECSCCEEEEEEETTEEEEEETTSCEE
T ss_pred -----------HHHHh--cCCEEEeCCEEEEEEecCCeEEEEECCCCEE
Confidence 11221 3899999999999988777777777666443
No 249
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.53 E-value=0.00046 Score=58.61 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++++|||+|+.|+-+|..|++.|.+|+|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 175 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRG 175 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 67999999999999999999999999999986
No 250
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.48 E-value=7e-05 Score=67.93 Aligned_cols=36 Identities=31% Similarity=0.339 Sum_probs=32.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~~~~ 98 (189)
..+|++|||||.+|+.+|.+|++.+ ++|+|+|++ ..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG-~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAG-IG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSS-CS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC-CC
Confidence 3579999999999999999999998 799999998 54
No 251
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.47 E-value=9.8e-05 Score=65.50 Aligned_cols=35 Identities=31% Similarity=0.491 Sum_probs=32.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
.+|++|||+|++|+.+|..|++.|++|+|+|++ ..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~-~~ 39 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG-QL 39 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CC
Confidence 468999999999999999999999999999997 53
No 252
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.44 E-value=0.0009 Score=60.04 Aligned_cols=76 Identities=20% Similarity=0.254 Sum_probs=53.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + ++.+.+.+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~----------~~~~~~~l~~------- 236 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMA-NQVMPP------------I----------DYEMAAYVHE------- 236 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTT------------S----------CHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecC-Cccccc------------C----------CHHHHHHHHH-------
Confidence 468999999999999999999999999999986 432111 1 1122222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeCCeEE
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFNGMWY 178 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~~~w~ 178 (189)
.+.. .|++++++++|++++.++++..
T Consensus 237 --------~l~~--~GV~i~~~~~v~~i~~~~~~v~ 262 (588)
T 3ics_A 237 --------HMKN--HDVELVFEDGVDALEENGAVVR 262 (588)
T ss_dssp --------HHHH--TTCEEECSCCEEEEEGGGTEEE
T ss_pred --------HHHH--cCCEEEECCeEEEEecCCCEEE
Confidence 1111 3899999999999987655433
No 253
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.40 E-value=0.0011 Score=54.13 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~ 205 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRK 205 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 4578999999999999999999999999999986
No 254
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.39 E-value=0.0011 Score=57.47 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|++.|.+|+|+|+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 179 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS 179 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeee
Confidence 457999999999999999999999999999986
No 255
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.38 E-value=0.00012 Score=64.96 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=32.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|++|||+|++|+.+|..|++.|++|+|+|++
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 4679999999999999999999999999999987
No 256
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.36 E-value=0.002 Score=52.42 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~ 177 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRR 177 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC
Confidence 3578999999999999999999999999999986
No 257
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.35 E-value=0.0014 Score=57.27 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=55.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCceeeeeCCcceeeecceeeEeeCCchhHHHHHHHhhhhhh
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMGTRMIGRQPLIFDHATQFFTVNDSRFGELVDVCWKVVLL 142 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 142 (189)
.++++|||+|..|+-+|..|++.|.+|+++++. +.+... + .++.+.+.+.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~------------~---------~d~~~~~~l~~------- 222 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEML-DRALIT------------L---------EDQDIVNTLLS------- 222 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SSSCTT------------S---------CCHHHHHHHHH-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeC-CcCCCC------------C---------CCHHHHHHHHh-------
Confidence 478999999999999999999999999999986 432111 0 01223222222
Q ss_pred cCchHHHHHHhccCCCcEEEeCceeEEEEEeC-CeEEEEeC
Q 041557 143 LGYSKSQNLNIFQTSKVNVVRTCWISNLEPFN-GMWYLGEN 182 (189)
Q Consensus 143 ~~~~~~~~~l~~~~~~v~v~~~t~V~~i~~~~-~~w~l~~~ 182 (189)
. + .++++++++|++++..+ ++..|.+.
T Consensus 223 --------~---l--~v~i~~~~~v~~i~~~~~~~v~v~~~ 250 (466)
T 3l8k_A 223 --------I---L--KLNIKFNSPVTEVKKIKDDEYEVIYS 250 (466)
T ss_dssp --------H---H--CCCEECSCCEEEEEEEETTEEEEEEC
T ss_pred --------c---C--EEEEEECCEEEEEEEcCCCcEEEEEE
Confidence 1 1 27999999999998876 77777665
No 258
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.32 E-value=0.00012 Score=66.47 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMGNP 97 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~~~ 97 (189)
..+|++|||||.+|+.+|.+|++. +++|+|+|++ .
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG-~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESG-S 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSS-C
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC-C
Confidence 468999999999999999999975 7999999998 5
No 259
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.31 E-value=0.0018 Score=53.08 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~ 184 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRR 184 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcC
Confidence 578999999999999999999999999999986
No 260
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.29 E-value=0.0019 Score=53.79 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~ 195 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRG 195 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 578999999999999999999999999999986
No 261
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.26 E-value=0.0016 Score=57.09 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 457999999999999999999999999999975
No 262
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.25 E-value=0.0001 Score=66.68 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-cCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDK-RGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e~~ 95 (189)
.+|++|||||.+|+.+|.+|++ .+++|+|+|++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecC
Confidence 4689999999999999999998 68999999997
No 263
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.24 E-value=0.0022 Score=55.52 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 180 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRG 180 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcC
Confidence 3568999999999999999999999999999986
No 264
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.24 E-value=0.001 Score=58.20 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 467999999999999999999999999999874
No 265
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.22 E-value=0.00024 Score=64.38 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-cCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDK-RGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e~~ 95 (189)
..+|++|||+|++|+.+|..|++ .|++|+|+|++
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecC
Confidence 45799999999999999999999 79999999987
No 266
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.21 E-value=0.00023 Score=63.85 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~ 95 (189)
..+|++|||+|++|+.+|..|++. |++|+|+|++
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 357999999999999999999998 8999999997
No 267
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.18 E-value=0.00072 Score=49.51 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=32.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
....+|+|||.|..|..+|..|.+.|++|+++|++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 34568999999999999999999999999999986
No 268
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.14 E-value=0.0045 Score=50.19 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=31.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 175 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR 175 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeC
Confidence 478999999999999999999999999999986
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.09 E-value=0.0031 Score=55.90 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 357999999999999999999999999999974
No 270
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.08 E-value=0.0046 Score=50.60 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 184 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRR 184 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCC
Confidence 478999999999999999999999999999986
No 271
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.06 E-value=0.00057 Score=55.90 Aligned_cols=37 Identities=24% Similarity=0.306 Sum_probs=33.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
.++|+|||||..|+-+|..|++.|.+|+|+++. +.+-
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~~~ 181 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR-DELR 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS-SSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecc-cccC
Confidence 468999999999999999999999999999986 5543
No 272
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.01 E-value=0.0055 Score=49.99 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 478999999999999999999999999999986
No 273
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.99 E-value=0.009 Score=48.32 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 176 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA 176 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeC
Confidence 578999999999999999999999999999986
No 274
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.99 E-value=0.0062 Score=54.70 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 457999999999999999999999999999974
No 275
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.97 E-value=0.0055 Score=49.47 Aligned_cols=33 Identities=30% Similarity=0.332 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|.+.|.+|+++++.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~ 186 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRR 186 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeC
Confidence 478999999999999999999999999999986
No 276
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.90 E-value=0.0044 Score=50.38 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~ 186 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRR 186 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEec
Confidence 578999999999999999999999999999986
No 277
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.90 E-value=0.0011 Score=56.84 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=34.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~ 102 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+|+. +.+..+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~-~~~l~~ 184 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIIL-EYPLER 184 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSS-SSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcC-Cccchh
Confidence 367999999999999999999999999999997 665443
No 278
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.88 E-value=0.0015 Score=48.50 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|||+|..|+.+|..|.+.|++|+++|+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4567999999999999999999999999999985
No 279
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.88 E-value=0.0092 Score=48.06 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|..|+-+|..|.+.|.+|+++++.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~ 179 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRR 179 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeC
Confidence 478999999999999999999999999999986
No 280
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.82 E-value=0.0017 Score=47.17 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+++|+|+|..|..+|..|.+.|++|+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 357999999999999999999999999999985
No 281
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.79 E-value=0.002 Score=47.57 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+++|+|+|..|...|..|.+.|++|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999999999999999999999999999985
No 282
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.76 E-value=0.0014 Score=53.27 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 3578999999999999999999999999999985
No 283
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.75 E-value=0.0019 Score=46.17 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|.+.|++|+++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999985
No 284
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.72 E-value=0.0042 Score=55.09 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=27.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC--------------CeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG--------------VKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g--------------~~v~v~e~~ 95 (189)
.+++|||||+.|+-+|..|++.+ .+|+|+|..
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~ 263 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEAL 263 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccc
Confidence 46999999999999999887543 579999986
No 285
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.69 E-value=0.005 Score=49.20 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 578999999999999999999999 99999986
No 286
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.56 E-value=0.0024 Score=44.29 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcC-CeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRG-VKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~ 95 (189)
..+|+|+|+|..|..++..|.+.| ++|+++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 357999999999999999999999 999999985
No 287
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.55 E-value=0.0032 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|+|+|..|..+|..|.+.|++|+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999974
No 288
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.43 E-value=0.004 Score=47.24 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR-GVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~-g~~v~v~e~~ 95 (189)
...+|+|||.|..|..+|..|.+. |++|+++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 356899999999999999999999 9999999985
No 289
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.40 E-value=0.012 Score=54.08 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=32.7
Q ss_pred CCCCEEEEC--CCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIG--GGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG--~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..++|+||| +|..|+-+|..|++.|.+|+++++. +.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~-~~l 560 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG-AQV 560 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS-SST
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc-ccc
Confidence 456799999 9999999999999999999999986 443
No 290
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.38 E-value=0.0028 Score=55.39 Aligned_cols=34 Identities=29% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|.+|+++|..|+++|++|+++|..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678999999999999999999999999999985
No 291
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.30 E-value=0.0036 Score=54.48 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|.|||.|.+|+++|..|+++|++|+++|..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~ 37 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTR 37 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999999999999999999999999985
No 292
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.26 E-value=0.0056 Score=50.03 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|.|||+|..|...|..|++.|++|+++|+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 357999999999999999999999999999985
No 293
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.06 E-value=0.0061 Score=51.35 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|||+|..|...|..++..|++|+++|..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999964
No 294
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.06 E-value=0.0064 Score=49.99 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|.|||+|..|...|..|++.|++|+++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 56999999999999999999999999999975
No 295
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.97 E-value=0.0073 Score=49.41 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~ 191 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR 191 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecC
Confidence 3578999999999999999999999999999986
No 296
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.94 E-value=0.021 Score=54.58 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~ 316 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDAR 316 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 478999999999999999999999999999986
No 297
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.91 E-value=0.0076 Score=53.92 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=33.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..++|+|||+|.+|+-+|..|++.|.+|+||++. +.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~-~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRT-PQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESS-CC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECC-CC
Confidence 4688999999999999999999999999999996 44
No 298
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.91 E-value=0.0084 Score=49.38 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~ 187 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRR 187 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcC
Confidence 3578999999999999999999999999999986
No 299
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.89 E-value=0.0081 Score=50.40 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|.|||+|..|...|..|+++|++|+++|+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999975
No 300
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.87 E-value=0.0078 Score=46.99 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|+|||+|..|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999999999975
No 301
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.80 E-value=0.0097 Score=49.45 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=30.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+++|.|||+|.-|...|..|+ .|++|+++|+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 4688999999999999999999 99999999985
No 302
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.78 E-value=0.01 Score=51.85 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=33.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
..++|+|||+|.+|+-+|..|++.|.+|+++++. +.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~-~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR-TAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECS-SCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC-CCC
Confidence 4578999999999999999999999999999986 544
No 303
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.76 E-value=0.011 Score=47.50 Aligned_cols=31 Identities=16% Similarity=0.122 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|++.|++|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 5899999999999999999999999999986
No 304
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.76 E-value=0.0091 Score=53.51 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=33.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..++|+|||+|.+|+-+|..|++.+.+|+||++. +.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~-~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRS-AN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESS-CC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECC-CC
Confidence 4688999999999999999999999999999996 44
No 305
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.75 E-value=0.011 Score=51.11 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=32.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVK-SNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~-v~v~e~~~~~ 98 (189)
..++|+|||+|.+|+-+|..|++.|.+ |+|+++. +.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~-~~ 247 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG-GG 247 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT-CC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC-CC
Confidence 467899999999999999999999999 9999986 43
No 306
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.74 E-value=0.0087 Score=53.59 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=33.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..++|+|||+|.+|+-+|..|++.+.+|+||++. +.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~-~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRT-PN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESS-CC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcC-CC
Confidence 4688999999999999999999999999999997 54
No 307
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.72 E-value=0.0084 Score=49.45 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+++|+|||+|-.|+..+..|.+.|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5688999999999999999999999999999864
No 308
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.72 E-value=0.013 Score=46.86 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=32.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...++|+|||||..|...+..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 35788999999999999999999999999999864
No 309
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.72 E-value=0.029 Score=53.87 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|+|||||..|+-+|..|.+.|. +|+|+++.
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK 365 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEec
Confidence 4589999999999999999999996 89999985
No 310
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.67 E-value=0.015 Score=51.29 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.-.+|.|||+|.-|...|..|++.|++|+++|..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 3467999999999999999999999999999986
No 311
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.63 E-value=0.012 Score=51.76 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+++|||.|..|+.+|..|+++|++|++||++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999999986
No 312
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.63 E-value=0.012 Score=48.87 Aligned_cols=32 Identities=22% Similarity=0.185 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|++.|++|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46999999999999999999999999999986
No 313
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.62 E-value=0.015 Score=48.66 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 314
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.60 E-value=0.015 Score=50.52 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|||+|.+|+.+|..|...|.+|+++|+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999999986
No 315
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.57 E-value=0.017 Score=45.17 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..+|.|||+|..|.+.|..|++.|++|+++++. +.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~-~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK-DQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT-CC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC-HH
Confidence 356999999999999999999999999999986 44
No 316
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.52 E-value=0.014 Score=47.51 Aligned_cols=31 Identities=19% Similarity=0.267 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999999999985
No 317
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.51 E-value=0.017 Score=46.11 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999986
No 318
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.48 E-value=0.013 Score=51.80 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.-+|.|||.|..|+..|..|++.|++|+++|+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 346999999999999999999999999999974
No 319
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.47 E-value=0.017 Score=50.77 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||+|..|...|..|++.|++|+++|+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3457999999999999999999999999999975
No 320
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.44 E-value=0.007 Score=44.21 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|...|..|.+.|++|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 568999999999999999999999999999975
No 321
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.42 E-value=0.027 Score=47.16 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=34.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
++|+|+|||..|..+++.+.+.|++|+++|.+...+.-.+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a 42 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA 42 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC
Confidence 57999999999999999999999999999986334444443
No 322
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.39 E-value=0.013 Score=48.41 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 46999999999999999999999999999986
No 323
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.39 E-value=0.016 Score=49.91 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|||+|..|+.+|..|...|.+|+++|+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999985
No 324
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.37 E-value=0.016 Score=48.45 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHH-HHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLA-CALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~-~A~~l~~~g~~v~v~e~~ 95 (189)
.++|.|||.|.+|++ +|..|.++|++|+++|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999996 899999999999999985
No 325
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.35 E-value=0.023 Score=47.72 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.+|+|||+|-.|.++|..|+..|+ +|+++|..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 479999999999999999999998 99999986
No 326
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.30 E-value=0.016 Score=50.77 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|+.+|..|+++|++|+++|+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 36999999999999999999999999999975
No 327
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.29 E-value=0.023 Score=47.23 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|++.|+ +|+++|..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 579999999999999999999998 99999986
No 328
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.28 E-value=0.024 Score=46.86 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||.|..|...|..|++.|++|+++|+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999999999986
No 329
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.27 E-value=0.016 Score=51.32 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~ 387 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA 387 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeC
Confidence 3578999999999999999999999999999986
No 330
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.26 E-value=0.022 Score=49.84 Aligned_cols=35 Identities=20% Similarity=0.450 Sum_probs=31.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
...++|+|||+|..|+-+|..|.+.|. +|+++++.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~ 297 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRR 297 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeC
Confidence 356889999999999999999999997 59999985
No 331
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.24 E-value=0.021 Score=47.49 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999974
No 332
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.22 E-value=0.022 Score=46.81 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|++.|++|+++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 57999999999999999999999999999985
No 333
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.19 E-value=0.02 Score=47.16 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|++.|+ +|+++|+.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 469999999999999999999999 99999975
No 334
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.19 E-value=0.017 Score=47.39 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=32.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPD 98 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~ 98 (189)
..+|.|||.|..|...|..|++.|++|+++|+. +.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~-~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIR-IE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSS-TT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCC-HH
Confidence 457999999999999999999999999999986 44
No 335
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.18 E-value=0.023 Score=46.16 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|++.|++|+++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 36999999999999999999999999999986
No 336
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.16 E-value=0.023 Score=47.31 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||+|..|...|..|++.|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3567999999999999999999999999999874
No 337
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.13 E-value=0.024 Score=48.99 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|||+|.+|+.+|..|...|.+|+++|+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3578999999999999999999999999999975
No 338
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.13 E-value=0.018 Score=47.15 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 46999999999999999999999999999985
No 339
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.10 E-value=0.027 Score=48.16 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|||+|.+|+.++..|...|.+|+++|+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999999985
No 340
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.08 E-value=0.029 Score=47.06 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.+|+|||+|..|..+|..|+..|+ +|+++|..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 479999999999999999999999 99999986
No 341
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.08 E-value=0.057 Score=45.79 Aligned_cols=44 Identities=27% Similarity=0.295 Sum_probs=35.6
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 60 ISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 60 ~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
..+.++|+|||+|..|..++..+.+.|++|+++|.....+...+
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ 54 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV 54 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh
Confidence 34567899999999999999999999999999997522334333
No 342
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.02 E-value=0.028 Score=47.71 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||+|.-|.+.|..|++.|++|+++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999999999985
No 343
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.00 E-value=0.029 Score=47.51 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|+|+|.+|+.++..|...|.+|+++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 478999999999999999999999999999975
No 344
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.99 E-value=0.02 Score=46.55 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|++.|++|+++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSS
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 6999999999999999999999999999986
No 345
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.98 E-value=0.033 Score=43.54 Aligned_cols=33 Identities=33% Similarity=0.330 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||+|..|...|..|.+.|++|+++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999985
No 346
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.98 E-value=0.022 Score=46.94 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.8
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 347
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.97 E-value=0.031 Score=45.42 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|+|+|-.|.++|..|++.|.+|+|+++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 4578999999999999999999999999999874
No 348
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.94 E-value=0.027 Score=49.88 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||+|..|...|..|++.|++|+++|++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 357999999999999999999999999999975
No 349
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.94 E-value=0.026 Score=45.49 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4679999999999999999999997 79999975
No 350
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.92 E-value=0.026 Score=50.00 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHc-CC-eEEEEecCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR-GV-KSNVFDMGNPD 98 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~-g~-~v~v~e~~~~~ 98 (189)
.+|.|||.|..|+.+|..|+++ |+ +|+++|+. +.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~-~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRN-SK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCC-CT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECC-hh
Confidence 4699999999999999999999 99 99999987 44
No 351
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.91 E-value=0.17 Score=46.16 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=26.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEE
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNV 91 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v 91 (189)
..++|+|||+|..|+-+|..|++.|.+|++
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 457899999999999999999999977654
No 352
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.90 E-value=0.032 Score=48.36 Aligned_cols=33 Identities=30% Similarity=0.158 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|||.|..|...|..|.+.|++|+++|++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999975
No 353
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.84 E-value=0.039 Score=46.21 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.+|+|||+|-.|..+|..|+..|+ +|.++|..
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 479999999999999999999998 99999975
No 354
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.82 E-value=0.044 Score=45.20 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||.|..|...|..|.+.|++|+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999986
No 355
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.81 E-value=0.022 Score=49.47 Aligned_cols=31 Identities=29% Similarity=0.374 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|+..|..|++.|++|+++|+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5899999999999999999999999999974
No 356
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.80 E-value=0.036 Score=47.09 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|+|+|..|+.+|..|...|.+|+++|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3578999999999999999999999999999975
No 357
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.80 E-value=0.03 Score=46.35 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+|+|||+|..|...|..|+..|+ .|.++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 59999999999999999999999 99999875
No 358
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.78 E-value=0.03 Score=46.53 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||.|..|...|..|++.|++|+++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 457999999999999999999999999999985
No 359
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.74 E-value=0.027 Score=46.05 Aligned_cols=32 Identities=34% Similarity=0.352 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|.+.|++|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999985
No 360
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.73 E-value=0.04 Score=46.11 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
...+|+|||+|..|..+|+.|+..|+ .|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34679999999999999999999999 99999974
No 361
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.71 E-value=0.039 Score=47.12 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|..|+.+|..|...|.+|+++|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678999999999999999999999999999974
No 362
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.67 E-value=0.033 Score=46.24 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=28.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|||+|..|...|..|++.|++|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 457999999999999999999999999999 53
No 363
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.62 E-value=0.055 Score=44.40 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=30.6
Q ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIG-GGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG-~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.||| .|..|.+.|..|.+.|++|+++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 35799999 9999999999999999999999986
No 364
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.61 E-value=0.031 Score=45.51 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=29.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++.| +|+++.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 4578999999999999999999998 69999875
No 365
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.57 E-value=0.048 Score=44.75 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=31.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++++|||+|-+|.+++..|.+.|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999999999999999999999999999886
No 366
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.54 E-value=0.041 Score=46.81 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||.|..|...|..|++.|++|+++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4567999999999999999999999999999985
No 367
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=94.53 E-value=0.056 Score=46.33 Aligned_cols=47 Identities=15% Similarity=0.271 Sum_probs=36.6
Q ss_pred cCCCCCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCce
Q 041557 57 TAPISSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRMG 104 (189)
Q Consensus 57 ~~~~~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~~ 104 (189)
..++++.++|.|+|+|..|..++..+.+.|++|.++| ....+..++.
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a 64 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS 64 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc
Confidence 3345567889999999999999999999999999999 5245555544
No 368
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.52 E-value=0.031 Score=49.09 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|||.|..||..|..|+++|++|+.||-+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 457999999999999999999999999999964
No 369
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.47 E-value=0.022 Score=47.91 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=29.4
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|++.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999874
No 370
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.46 E-value=0.046 Score=50.73 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
-.+|.|||+|..|...|..|++.|++|+++|+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 357999999999999999999999999999975
No 371
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=94.45 E-value=0.035 Score=45.16 Aligned_cols=34 Identities=26% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|+|+|-+|.++|..|++.|.+|+|+++.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4578999999999999999999999999999885
No 372
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.44 E-value=0.044 Score=42.16 Aligned_cols=31 Identities=29% Similarity=0.238 Sum_probs=29.1
Q ss_pred CEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIG-GGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG-~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|+||| +|..|...|..|.+.|++|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999 9999999999999999999999985
No 373
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.43 E-value=0.045 Score=45.22 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|||+|.+|..+|..|.+.|. +|+|+++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45789999999999999999999998 89999875
No 374
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.41 E-value=0.054 Score=42.16 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=31.0
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|.|| |..|..++..|.++|++|+++.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 5678999998 999999999999999999999985
No 375
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.38 E-value=0.045 Score=45.20 Aligned_cols=31 Identities=32% Similarity=0.383 Sum_probs=28.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|+ .|++|+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 46999999999999999999 99999999985
No 376
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.35 E-value=0.021 Score=50.15 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|+|+|+|-.|...|..|...|++|+|+|++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5999999999999999999999999999985
No 377
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.32 E-value=0.037 Score=48.42 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|+..|..|++ |++|+++|+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 469999999999999999998 9999999975
No 378
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.32 E-value=0.063 Score=42.98 Aligned_cols=32 Identities=25% Similarity=0.250 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|.|+|..|..++..|.++|++|+++.+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999986
No 379
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.32 E-value=0.043 Score=48.13 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+++|+|||+|.+|...+..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4678999999999999999999999999999974
No 380
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.30 E-value=0.056 Score=44.42 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|..|..+|..|...|.+|+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 5678999999999999999999999999999985
No 381
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.29 E-value=0.034 Score=47.84 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=28.2
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|+..|..|++ |++|+++|+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 58999999999999999999 9999999974
No 382
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.041 Score=45.76 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC-CeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG-VKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|++.| ++|+++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 57999999999999999999999 999999986
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.27 E-value=0.065 Score=43.98 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||+|..|...|..|.+.|++|+++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999985
No 384
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.26 E-value=0.051 Score=45.06 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=28.6
Q ss_pred CEEEECCCHHHHHHHHHHHHc--CCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKR--GVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~ 95 (189)
+|+|||+|..|...|..|++. |++|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999985 7899999986
No 385
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.25 E-value=0.06 Score=44.13 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|..|..+|..|...|.+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5678999999999999999999999999999985
No 386
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.24 E-value=0.046 Score=43.53 Aligned_cols=31 Identities=32% Similarity=0.433 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHcC-CeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRG-VKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g-~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|.+.| ++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 5899999999999999999999 999999985
No 387
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.23 E-value=0.05 Score=43.75 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|.+.|++|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5899999999999999999999999999875
No 388
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.17 E-value=0.05 Score=47.53 Aligned_cols=34 Identities=24% Similarity=0.160 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHH--------------------HcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLD--------------------KRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~--------------------~~g~-~v~v~e~~ 95 (189)
..++|+|||+|..|+-+|..|+ +.|. +|+|+++.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~ 198 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRR 198 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcC
Confidence 4678999999999999999999 5687 69999985
No 389
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.17 E-value=0.047 Score=48.19 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|..|...|..|+++|++|+++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3567999999999999999999999999999985
No 390
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.16 E-value=0.1 Score=44.14 Aligned_cols=43 Identities=26% Similarity=0.189 Sum_probs=35.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCCcCc
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDLEGRM 103 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~gg~~ 103 (189)
.+.++|.|||+|..|..++..+.+.|++|+++|.....+..++
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ 52 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV 52 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh
Confidence 3467899999999999999999999999999997623344443
No 391
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.16 E-value=0.056 Score=43.55 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=29.0
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+|.|||+|..|...|..|.+.|+ +|+++|+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 59999999999999999999998 89999975
No 392
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.16 E-value=0.062 Score=44.70 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|.|||.|..|.+.|..|.+.|+ +|+++|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 3579999999999999999999999 99999985
No 393
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.15 E-value=0.065 Score=45.02 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|+|||+|..|.++|+.|+..|+ .+.++|..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4579999999999999999999999 99999986
No 394
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=94.14 E-value=0.051 Score=50.37 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||+|..|...|..|++.|++|+++|+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 346 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDIN 346 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECC
Confidence 4567999999999999999999999999999975
No 395
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.12 E-value=0.037 Score=45.14 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=28.6
Q ss_pred CEEEECCCHHHHHHHHHHHHc-----C-CeEEEEec
Q 041557 65 HVKIIGGGMAVLACALRLDKR-----G-VKSNVFDM 94 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~-----g-~~v~v~e~ 94 (189)
+|.|||+|..|...|..|++. | ++|+++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 699999999999999999999 9 99999986
No 396
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.10 E-value=0.047 Score=45.16 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3579999999999999999999999 99999984
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.10 E-value=0.055 Score=46.83 Aligned_cols=35 Identities=29% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
....+|+|+|+|.+|+.+|..|...|. +|+++|+.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 345789999999999999999999999 89999985
No 398
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.07 E-value=0.048 Score=45.37 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+|+|||+|..|.+.|..|++.|+ +|+++|..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 58999999999999999999999 99999975
No 399
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.07 E-value=0.038 Score=45.66 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=28.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|.+||-|..|..+|..|.++|++|++||+.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~ 37 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRT 37 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC---
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999999999986
No 400
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.01 E-value=0.062 Score=45.45 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|.+.|..|.+.|++|+++|+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56999999999999999999999999999985
No 401
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.99 E-value=0.045 Score=46.28 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=30.5
Q ss_pred CEEEECCCHHHHHHHHHHHHcC-------CeEEEEecCCCC
Q 041557 65 HVKIIGGGMAVLACALRLDKRG-------VKSNVFDMGNPD 98 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g-------~~v~v~e~~~~~ 98 (189)
+|.|||+|..|.+.|..|++.| ++|+++++. +.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~-~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD-EF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS-CC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC-hh
Confidence 6999999999999999999999 999999986 44
No 402
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.98 E-value=0.049 Score=50.34 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=31.6
Q ss_pred CCCCEEEEC--CCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIG--GGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG--~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+||| +|..|+-+|..|++.|.+|+|+++.
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~ 562 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 562 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc
Confidence 457899999 9999999999999999999999986
No 403
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.97 E-value=0.068 Score=47.44 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|.|||.|..|..+|..|+++|++|+++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~ 42 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRT 42 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999999999999999999999999999985
No 404
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.94 E-value=0.062 Score=46.38 Aligned_cols=35 Identities=23% Similarity=0.084 Sum_probs=31.7
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
....+|+|+|+|-+|..+|..|...|. +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356789999999999999999999998 79999984
No 405
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.94 E-value=0.036 Score=43.47 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEE-EecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNV-FDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v-~e~~ 95 (189)
.+|.|||+|..|...|..|.+.|++|++ +++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4799999999999999999999999999 8875
No 406
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.94 E-value=0.08 Score=44.35 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|+|||+|..|.++|+.|+..|+ .+.++|..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4579999999999999999999998 99999975
No 407
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.94 E-value=0.093 Score=39.40 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=29.8
Q ss_pred CCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|+|+|| |..|..++..|.++|++|+++.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 57999998 999999999999999999999875
No 408
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.89 E-value=0.071 Score=44.22 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.+|+|||+|..|...|..|+..|+ +|.++|..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 469999999999999999999997 99999975
No 409
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.87 E-value=0.058 Score=43.81 Aligned_cols=32 Identities=31% Similarity=0.359 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|.+.|++|+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999975
No 410
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.85 E-value=0.064 Score=43.51 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=29.9
Q ss_pred CCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||+ |..|...|..|.+.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999 999999999999999999999975
No 411
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.83 E-value=0.057 Score=44.58 Aligned_cols=31 Identities=29% Similarity=0.234 Sum_probs=29.0
Q ss_pred CEEEECCCHHHHHHHHHHHHcC--CeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRG--VKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g--~~v~v~e~~ 95 (189)
+|+|||+|-.|...|..|++.| .+|+++|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 6999999999999999999999 789999975
No 412
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.81 E-value=0.076 Score=42.19 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC----CeEEEEecCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG----VKSNVFDMGNPD 98 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g----~~v~v~e~~~~~ 98 (189)
.+|.|||+|..|...|..|.+.| ++|+++++. +.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~-~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS-KK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS-CC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC-cc
Confidence 36999999999999999999999 799999986 44
No 413
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.79 E-value=0.028 Score=44.15 Aligned_cols=32 Identities=25% Similarity=0.248 Sum_probs=29.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+++|+|+|..|...|..|.+.|+ |+++|++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 4579999999999999999999999 9999985
No 414
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.79 E-value=0.058 Score=43.70 Aligned_cols=31 Identities=29% Similarity=0.216 Sum_probs=29.3
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|.+.|++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999985
No 415
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.78 E-value=0.053 Score=43.97 Aligned_cols=31 Identities=29% Similarity=0.214 Sum_probs=29.4
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|.+.|++|.++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6999999999999999999999999999975
No 416
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.77 E-value=0.064 Score=43.59 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|||+|..|.+.|..|.+.|.+|+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 467999999999999999999999999999875
No 417
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.72 E-value=0.079 Score=44.55 Aligned_cols=33 Identities=27% Similarity=0.424 Sum_probs=29.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|+|||+|..|.++|+.|+..|+ .++++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4579999999999999999999997 89999974
No 418
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.70 E-value=0.062 Score=44.17 Aligned_cols=34 Identities=24% Similarity=0.127 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|||+|-+|.++|..|.+.|. +|+|+.|.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46789999999999999999999998 89999875
No 419
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.70 E-value=0.075 Score=47.21 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=32.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+.++|+|+|..|..+|..|+..|.+|+++|..
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35788999999999999999999999999999874
No 420
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.65 E-value=0.078 Score=42.28 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|+|+|+|..|..++..|.++|++|+++.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 57999999999999999999999999999985
No 421
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.64 E-value=0.045 Score=46.65 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=27.4
Q ss_pred CEEEECCCHHHHHHHHHHHH-cCCeEEEEe
Q 041557 65 HVKIIGGGMAVLACALRLDK-RGVKSNVFD 93 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~-~g~~v~v~e 93 (189)
+|+|||+|..|...|..|++ .|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 59999999999999999998 499999999
No 422
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=93.62 E-value=0.086 Score=49.14 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.-++|.|||+|..|...|..++..|++|+++|..
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~ 348 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESD 348 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccch
Confidence 4578999999999999999999999999999964
No 423
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.61 E-value=0.097 Score=41.52 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC----eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV----KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~----~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|.+.|+ +|.++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 469999999999999999999998 99999985
No 424
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.60 E-value=0.042 Score=45.78 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC-------CeEEEEecCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG-------VKSNVFDMGNPD 98 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g-------~~v~v~e~~~~~ 98 (189)
.+|.|||+|..|.+.|..|++.| ++|+++++. +.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~-~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE-ED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC-CB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC-hh
Confidence 36999999999999999999999 899999986 44
No 425
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.59 E-value=0.071 Score=47.30 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=31.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~ 218 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRT 218 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcC
Confidence 4688999999999999999999999999999986
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.55 E-value=0.092 Score=46.78 Aligned_cols=35 Identities=29% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMGNPDL 99 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~~~~~ 99 (189)
.+++|||+|..|...|..|.+.|++|+++|++ +..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d-~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQ-ESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECC-hHH
Confidence 78999999999999999999999999999987 543
No 427
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.54 E-value=0.05 Score=47.99 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~ 95 (189)
.+|.|||.|..|+..|..|+++ |++|+++|+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4699999999999999999999 7999999974
No 428
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.52 E-value=0.088 Score=44.98 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=32.0
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...++|+|+|.|-.|..+|..|.+.|.+|+++|..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45688999999999999999999999999999864
No 429
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.52 E-value=0.094 Score=43.12 Aligned_cols=34 Identities=32% Similarity=0.292 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.+++..|++.|. +|+|+.+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 69999875
No 430
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.52 E-value=0.095 Score=43.89 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 89999875
No 431
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.51 E-value=0.082 Score=44.61 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=30.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+..+|+|||+|..|..+|+.|+..|+ .+.++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45689999999999999999999998 89999964
No 432
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.50 E-value=0.09 Score=43.84 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
.+|+|||+|-.|.++|+.|+..++ .+.++|..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999999998 89999975
No 433
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.47 E-value=0.12 Score=44.67 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=32.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+.++|.|+|+|..|..++..+.+.|++|.++|..
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 45678999999999999999999999999999875
No 434
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.44 E-value=0.097 Score=39.82 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=28.8
Q ss_pred CEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|+|+|| |..|..++..|.++|++|+++.+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 4899996 999999999999999999999985
No 435
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.44 E-value=0.065 Score=46.83 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+..|||.|..|+.+|..|+++|++|++||.+
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 456899999999999999999999999999975
No 436
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.43 E-value=0.067 Score=42.64 Aligned_cols=30 Identities=33% Similarity=0.272 Sum_probs=28.2
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
+|.|||.|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 437
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.43 E-value=0.093 Score=46.51 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|..+|..|+++|++|+++++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 438
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.41 E-value=0.068 Score=42.97 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=28.3
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||+|..|...|..|.+ |++|+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 59999999999999999999 9999999985
No 439
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.39 E-value=0.099 Score=42.95 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=30.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.+++..|++.|. +|+|+.+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46789999999999999999999996 89999875
No 440
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.38 E-value=0.11 Score=42.33 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC---eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV---KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~---~v~v~e~~ 95 (189)
..+|.|||+|..|.+.|..|.+.|+ +|+++|+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 3579999999999999999999999 89999986
No 441
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.38 E-value=0.11 Score=43.57 Aligned_cols=33 Identities=33% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|.|||.|..|.+.|..|.+.|++|+++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 346999999999999999999999999999985
No 442
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=93.35 E-value=0.075 Score=43.40 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=30.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|+|+|-.|.++|..|++.| +|+|+++.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 4578999999999999999999999 99999874
No 443
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.33 E-value=0.1 Score=42.64 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999996 89999874
No 444
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.32 E-value=0.088 Score=46.37 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=29.4
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|+++|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999975
No 445
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.29 E-value=0.11 Score=42.15 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=31.1
Q ss_pred CCCCEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIG-GGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG-~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++++|+| +|-.|.++|..|++.|.+|+++++.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 457899999 9999999999999999999999875
No 446
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.28 E-value=0.11 Score=39.84 Aligned_cols=31 Identities=19% Similarity=0.241 Sum_probs=28.9
Q ss_pred CEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|+|+|| |..|..++..|.++|++|+++.+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4899998 999999999999999999999875
No 447
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.27 E-value=0.081 Score=43.79 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+|+|||+|..|.++|+.|+..|+ ++.++|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 58999999999999999999998 89999975
No 448
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.23 E-value=0.094 Score=41.86 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCe-EEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVK-SNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~-v~v~e~~ 95 (189)
.+|.|||+|..|...|..|.+.|++ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 3699999999999999999999999 8999875
No 449
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.22 E-value=0.079 Score=46.42 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHc--CCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKR--GVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~--g~~v~v~e~~ 95 (189)
.+|.|||.|..|+..|..|++. |++|+++|+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3699999999999999999999 8999999974
No 450
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.21 E-value=0.094 Score=46.18 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|+++|++|+++++.
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6999999999999999999999999999985
No 451
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.20 E-value=0.1 Score=46.45 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=32.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...++|+|||.|..|..+|..|...|.+|+++|..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45788999999999999999999999999999975
No 452
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.18 E-value=0.13 Score=41.65 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.. +++|||+|-+|.+++..|.+.|. +|+|++|.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35 89999999999999999999998 89999875
No 453
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=93.14 E-value=0.1 Score=44.92 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++|+|||+|..|..+|..|...|. +|+++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46789999999999999999999998 89999875
No 454
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.07 E-value=0.13 Score=41.34 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=30.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.. +++|||+|-.|...|..|.+.|.+|+++++.
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 35 8999999999999999999999999999875
No 455
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.07 E-value=0.11 Score=43.77 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=30.9
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
....+|+|||+|..|.++|+.|+.+|+ .+.++|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 345689999999999999999999997 79999964
No 456
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.07 E-value=0.099 Score=43.08 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.++++.|.+.|. +|+|+.|.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999998 89999875
No 457
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.05 E-value=0.14 Score=41.27 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.1
Q ss_pred CEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCC
Q 041557 65 HVKIIGG-GMAVLACALRLDKRGVKSNVFDMGNPDLE 100 (189)
Q Consensus 65 ~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~~~~~g 100 (189)
+|+|.|| |..|..++..|.++|++|+++.|. +..+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~-~~~~ 37 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRK-PGPG 37 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CCTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-CCcC
Confidence 4899998 999999999999999999999886 5543
No 458
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.04 E-value=0.031 Score=44.95 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=29.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEec
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDM 94 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~ 94 (189)
.+|.|||.|..|.+.|..|.++|++|+++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 4699999999999999999999999999987
No 459
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.02 E-value=0.11 Score=43.80 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=29.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|+|||+|..|.++|+.|+..|+ .+.++|..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4579999999999999999999998 79999964
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.99 E-value=0.099 Score=43.39 Aligned_cols=32 Identities=25% Similarity=0.714 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
.+|+|||+|..|...|+.|+.+|+ .+.++|..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 579999999999999999999998 89999986
No 461
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.97 E-value=0.13 Score=42.94 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..++++|+|+|-+|.+++..|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46789999999999999999999998 79999875
No 462
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.92 E-value=0.14 Score=42.89 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|..|...|..|+..|++|+++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~ 182 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRT 182 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCC
Confidence 4678999999999999999999999999999986
No 463
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.92 E-value=0.12 Score=45.34 Aligned_cols=32 Identities=16% Similarity=0.334 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|+++|++|+++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 57999999999999999999999999999975
No 464
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.92 E-value=0.072 Score=47.05 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=30.4
Q ss_pred CCCCEEEECCCHHHHH-HHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLA-CALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~-~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||-|-+|++ +|..|.++|++|++.|..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~ 55 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLA 55 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECC
Confidence 3578999999999997 799999999999999975
No 465
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.90 E-value=0.13 Score=42.34 Aligned_cols=33 Identities=15% Similarity=0.038 Sum_probs=30.3
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+|+|+|| |..|...+..|.+.|++|.++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARP 43 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999998 999999999999999999999986
No 466
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=92.86 E-value=0.12 Score=45.13 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=32.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+.|+|||.|..|..+|..|...|.+|+++|..
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35788999999999999999999999999999975
No 467
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.82 E-value=0.11 Score=41.90 Aligned_cols=34 Identities=32% Similarity=0.247 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
...+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35689999999999999999999997 68999864
No 468
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=92.81 E-value=0.13 Score=44.51 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC---eEEEEecCCC-CCCcC
Q 041557 63 NPHVKIIGG-GMAVLACALRLDKRGV---KSNVFDMGNP-DLEGR 102 (189)
Q Consensus 63 ~~~v~IiG~-G~~Gl~~A~~l~~~g~---~v~v~e~~~~-~~gg~ 102 (189)
..+|+|||+ |.+|+.++..+...|. .|+++|.. . ..|++
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~-~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIK-ETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHH-HHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecc-ccccCCc
Confidence 568999999 9999999999999998 89999985 4 44554
No 469
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.81 E-value=0.11 Score=43.09 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHcC----CeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRG----VKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g----~~v~v~e~~ 95 (189)
.+|.|||+|..|...|..|.+.| ++|+++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 46999999999999999999999 899999986
No 470
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.75 E-value=0.11 Score=43.16 Aligned_cols=34 Identities=29% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
...+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45689999999999999999999997 69999975
No 471
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.71 E-value=0.16 Score=41.67 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=29.7
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|.|| |..|..++..|.++|++|+++++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 4578999998 999999999999999999999986
No 472
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.69 E-value=0.11 Score=41.35 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.+|.|||.|..|...|..|.+.|+.|.++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 36999999999999999999999999999985
No 473
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.62 E-value=0.14 Score=43.40 Aligned_cols=34 Identities=29% Similarity=0.336 Sum_probs=30.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
...+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46789999999999999999999997 68899874
No 474
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.62 E-value=0.13 Score=43.53 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=29.4
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGG-GMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~-G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|+|||+ |..|.++|+.|..+|. .+.++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 467999997 9999999999999995 79999964
No 475
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.58 E-value=0.13 Score=43.01 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=28.8
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+|+|||+|..|.++|+.|+..|+ .+.++|..
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 58999999999999999999997 89999986
No 476
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.56 E-value=0.12 Score=44.94 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=29.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHc--------------------CC-eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKR--------------------GV-KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~--------------------g~-~v~v~e~~ 95 (189)
..++|+|||+|..|+-+|..|++. |. +|+|+++.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~ 200 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR 200 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecC
Confidence 467899999999999999999874 54 89999985
No 477
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.52 E-value=0.12 Score=43.56 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=30.7
Q ss_pred CCCCCEEEECCC-HHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGG-MAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G-~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...++++|||+| +.|..+|..|...|.+|+|+++.
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 356889999999 67999999999999999998764
No 478
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.52 E-value=0.15 Score=41.04 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=30.7
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|.|| |..|..++..|.++|++|+++++.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 467999999 999999999999999999999985
No 479
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=92.49 E-value=0.11 Score=42.85 Aligned_cols=32 Identities=34% Similarity=0.352 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|.+||-|.-|..+|..|.+.|++|++|++.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999985
No 480
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.39 E-value=0.15 Score=42.30 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=29.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|+|||+|..|.+.|+.|+..|. .+.++|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3579999999999999999998885 79999974
No 481
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.34 E-value=0.16 Score=41.22 Aligned_cols=33 Identities=21% Similarity=0.040 Sum_probs=30.3
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 63 NPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
.++|+|.|| |..|..++..|.++|++|+++++.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 457999998 999999999999999999999985
No 482
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.34 E-value=0.15 Score=41.69 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
.++++|||+|-+|.++++.|.+.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 79999874
No 483
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.31 E-value=0.22 Score=40.34 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=30.8
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|.|| |..|..++..|.++|++|+++++.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999998 999999999999999999999874
No 484
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.30 E-value=0.16 Score=42.45 Aligned_cols=34 Identities=32% Similarity=0.310 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|..|...|..|...|++|+++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~ 187 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGR 187 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4678999999999999999999999999999975
No 485
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.29 E-value=0.15 Score=42.42 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
..+|+|||+|-.|.++|+.|+..|+ .+.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3579999999999999999999985 79999864
No 486
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.21 E-value=0.085 Score=42.58 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=28.6
Q ss_pred CEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+|.|||.|..|...|..|.+.|++|++++ .
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~ 34 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-I 34 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-S
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-C
Confidence 69999999999999999999999999998 6
No 487
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.17 E-value=0.15 Score=39.20 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=29.6
Q ss_pred CCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|+|.|| |..|..++..|.++|++|+++.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 57999995 999999999999999999999985
No 488
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=92.15 E-value=0.19 Score=42.18 Aligned_cols=35 Identities=31% Similarity=0.197 Sum_probs=32.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 61 SSNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 61 ~~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...++|.|||.|-.|...|..|...|++|+++++.
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~ 178 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRH 178 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSS
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCC
Confidence 35678999999999999999999999999999986
No 489
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=92.14 E-value=0.2 Score=42.07 Aligned_cols=34 Identities=32% Similarity=0.278 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|.|||.|-.|...|..|...|++|+++++.
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~ 196 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRS 196 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5678999999999999999999999999999986
No 490
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.13 E-value=0.16 Score=43.00 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 63 NPHVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 63 ~~~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
..+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5689999999999999999999997 69999874
No 491
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=92.08 E-value=0.2 Score=38.91 Aligned_cols=32 Identities=22% Similarity=0.133 Sum_probs=29.1
Q ss_pred CCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+.|+|.|| |-.|..+|..|+++|++|+++++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35899987 999999999999999999999985
No 492
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.05 E-value=0.23 Score=40.64 Aligned_cols=34 Identities=24% Similarity=0.124 Sum_probs=30.9
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
...+|+|.|| |..|..++..|.++|++|+++++.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4567999998 999999999999999999999984
No 493
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.99 E-value=0.19 Score=44.04 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..++|+|||.|..|..+|..|...|.+|+++|..
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5788999999999999999999999999999975
No 494
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.98 E-value=0.19 Score=40.84 Aligned_cols=36 Identities=17% Similarity=0.002 Sum_probs=30.0
Q ss_pred CCCCCCEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Q 041557 60 ISSNPHVKIIGG-GMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 60 ~~~~~~v~IiG~-G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
+.+..+|+|.|| |..|..++..|.++|++|+++++.
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 445678999997 999999999999999999999985
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.96 E-value=0.25 Score=37.83 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=29.1
Q ss_pred CCEEEECC-CHHHHHHHHHHH-HcCCeEEEEecC
Q 041557 64 PHVKIIGG-GMAVLACALRLD-KRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~-G~~Gl~~A~~l~-~~g~~v~v~e~~ 95 (189)
+.|+|+|| |-.|..++..|+ +.|++|+++.+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 45999995 999999999999 899999999886
No 496
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.94 E-value=0.18 Score=40.04 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=30.3
Q ss_pred CCCCEEEECC-C-HHHHHHHHHHHHcCCeEEEEecC
Q 041557 62 SNPHVKIIGG-G-MAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~-G-~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
..+.++|.|| | -.|..+|..|+++|++|+++++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 4678999998 7 49999999999999999999874
No 497
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.88 E-value=0.19 Score=42.07 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=29.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHcCC--eEEEEecC
Q 041557 62 SNPHVKIIGGGMAVLACALRLDKRGV--KSNVFDMG 95 (189)
Q Consensus 62 ~~~~v~IiG~G~~Gl~~A~~l~~~g~--~v~v~e~~ 95 (189)
+..+|+|||+|-.|.++|+.|...++ .+.++|..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44679999999999999999998886 79999864
No 498
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=91.86 E-value=0.21 Score=41.86 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Q 041557 64 PHVKIIGGGMAVLACALRLDKRGVKSNVFDMG 95 (189)
Q Consensus 64 ~~v~IiG~G~~Gl~~A~~l~~~g~~v~v~e~~ 95 (189)
++|+|||+|..|...+..|.+.|++|++++..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999975
No 499
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.86 E-value=0.19 Score=41.67 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=28.4
Q ss_pred CEEEECCCHHHHHHHHHHHHcCC-eEEEEecC
Q 041557 65 HVKIIGGGMAVLACALRLDKRGV-KSNVFDMG 95 (189)
Q Consensus 65 ~v~IiG~G~~Gl~~A~~l~~~g~-~v~v~e~~ 95 (189)
+|+|||+|..|.+.|+.|+..++ .+.++|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 58999999999999999999898 59999975
No 500
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=91.86 E-value=0.57 Score=40.03 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=24.9
Q ss_pred CEEEECCCHHH----------HHHHHHHHHcCCe-----EEEEecCCCCCC
Q 041557 65 HVKIIGGGMAV----------LACALRLDKRGVK-----SNVFDMGNPDLE 100 (189)
Q Consensus 65 ~v~IiG~G~~G----------l~~A~~l~~~g~~-----v~v~e~~~~~~g 100 (189)
+++|||+|+.| +.+|..|.+.|.+ |+++++. +.++
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~-~~~~ 200 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSE-PYIG 200 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESS-SSTT
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCC-cccc
Confidence 46899997653 4445777788875 9999986 5543
Done!