BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041564
(151 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|4836950|gb|AAD30652.1|AC006085_25 Hypothetical protein [Arabidopsis thaliana]
Length = 688
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 23/85 (27%)
Query: 23 LKNQIIGSQTKKLSFLKK----------------------LYRLILPPSRFTCGFEA-IQ 59
+KNQIIG++TKKLSFLK L + F CGFEA +Q
Sbjct: 43 VKNQIIGNRTKKLSFLKLGAIPAIASVLADADDSDECNNILVQSAAALGSFACGFEAGVQ 102
Query: 60 AMLDAGLFPDLSLIFSRRDEQVADT 84
A+LDAG+FP L + + DE+V D
Sbjct: 103 AVLDAGVFPHLLRLLTNTDEKVVDA 127
>gi|15223823|ref|NP_175546.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis
thaliana]
gi|20260482|gb|AAM13139.1| unknown protein [Arabidopsis thaliana]
gi|30725506|gb|AAP37775.1| At1g51350 [Arabidopsis thaliana]
gi|332194533|gb|AEE32654.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis
thaliana]
Length = 666
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 23/86 (26%)
Query: 22 RLKNQIIGSQTKKLSFLKK----------------------LYRLILPPSRFTCGFEA-I 58
+KNQIIG++TKKLSFLK L + F CGFEA +
Sbjct: 42 EVKNQIIGNRTKKLSFLKLGAIPAIASVLADADDSDECNNILVQSAAALGSFACGFEAGV 101
Query: 59 QAMLDAGLFPDLSLIFSRRDEQVADT 84
QA+LDAG+FP L + + DE+V D
Sbjct: 102 QAVLDAGVFPHLLRLLTNTDEKVVDA 127
>gi|297847504|ref|XP_002891633.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337475|gb|EFH67892.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 666
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 23/86 (26%)
Query: 22 RLKNQIIGSQTKKLSFLK------------------KLYRLILPPS----RFTCGFEA-I 58
+KNQIIG++TKKLSFLK K +++ + F CGFEA +
Sbjct: 42 EVKNQIIGNRTKKLSFLKLGAIPAIASVLADADDSDKCNNILVQSAAALGSFACGFEAGV 101
Query: 59 QAMLDAGLFPDLSLIFSRRDEQVADT 84
QA+LDAG+FP L + + DE+V D
Sbjct: 102 QAVLDAGVFPHLLRLLTNPDEKVVDA 127
>gi|225435441|ref|XP_002282785.1| PREDICTED: armadillo repeat-containing protein 8 [Vitis vinifera]
gi|297746314|emb|CBI16370.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Query: 23 LKNQIIGSQTKKLSFLK--------------------KLYRLILPPSRFTCGFEA-IQAM 61
+KNQIIG++TKKLS++K L + F CGFEA +QA+
Sbjct: 34 VKNQIIGNRTKKLSYIKLGAVPAVVSVIAATADDCSSVLVQSAAAIGSFACGFEAGVQAV 93
Query: 62 LDAGLFPDLSLIFSRRDEQVAD 83
L AG FP L + S + +V D
Sbjct: 94 LRAGAFPHLLRLLSNSNGKVVD 115
>gi|147805930|emb|CAN74401.1| hypothetical protein VITISV_043630 [Vitis vinifera]
Length = 637
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Query: 23 LKNQIIGSQTKKLSFLK--------------------KLYRLILPPSRFTCGFEA-IQAM 61
+KNQIIG++TKKLS++K L + F CGFEA +QA+
Sbjct: 34 VKNQIIGNRTKKLSYIKLGAVPAVXSVIAATADDCSSVLVQSAAAIGSFACGFEAGVQAV 93
Query: 62 LDAGLFPDLSLIFSRRDEQVAD 83
L AG FP L + S + +V D
Sbjct: 94 LRAGAFPHLLRLLSNSNGKVVD 115
>gi|449442531|ref|XP_004139035.1| PREDICTED: armadillo repeat-containing protein 8-like [Cucumis
sativus]
gi|449476065|ref|XP_004154630.1| PREDICTED: armadillo repeat-containing protein 8-like [Cucumis
sativus]
Length = 655
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 19/81 (23%)
Query: 23 LKNQIIGSQTKKLSFLK------------------KLYRLILPPSRFTCGFEA-IQAMLD 63
+KNQIIG++TKKLSF+K L + FTCG +A + A+LD
Sbjct: 35 IKNQIIGNRTKKLSFIKLGVVPHVAAILSSTSDPNILVQSAAVLGSFTCGVDAGVSAVLD 94
Query: 64 AGLFPDLSLIFSRRDEQVADT 84
AG FP L + + D +V D
Sbjct: 95 AGAFPRLLRLLAHPDPKVVDA 115
>gi|168045613|ref|XP_001775271.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673352|gb|EDQ59876.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 654
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 19/81 (23%)
Query: 23 LKNQIIGSQTKKLSFLK-----KLYRLILPPSR-------------FTCGFEA-IQAMLD 63
+KNQIIG++TKKLS++K ++ ++ + F CG +A ++A+LD
Sbjct: 32 VKNQIIGNKTKKLSYIKLGAVPRVVEILASDTEIPLLVQSAAAVGSFACGIDAGVRAVLD 91
Query: 64 AGLFPDLSLIFSRRDEQVADT 84
+G+ P L + D +VA+T
Sbjct: 92 SGVLPHLLKMLQNGDTKVAET 112
>gi|168008244|ref|XP_001756817.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692055|gb|EDQ78414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 654
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 19/81 (23%)
Query: 23 LKNQIIGSQTKKLSFLK------------------KLYRLILPPSRFTCGFEA-IQAMLD 63
+KNQIIG++TKKLS++K L + F CG +A ++A+LD
Sbjct: 32 VKNQIIGNKTKKLSYIKLGAVPRVVEILASDTDIPLLVQSAAAVGSFACGTDAGVRAVLD 91
Query: 64 AGLFPDLSLIFSRRDEQVADT 84
+G+ P L + D +VA+T
Sbjct: 92 SGVLPHLLKMLQNGDTKVAET 112
>gi|356524425|ref|XP_003530829.1| PREDICTED: armadillo repeat-containing protein 8-like [Glycine max]
Length = 672
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 23 LKNQIIGSQTKKLSFLKK-----------------LYRLILPPSRFTCGFE-AIQAMLDA 64
+KN IIG++TKK S++K + + F CG + ++A+LDA
Sbjct: 56 VKNHIIGNRTKKHSYIKLGAVPAVAAALADSDPNLIVQSAAALGSFACGVDDGVRAVLDA 115
Query: 65 GLFPDLSLIFSRRDEQVADT 84
G FP L + S DE+V D
Sbjct: 116 GAFPRLIGLLSAHDEKVVDA 135
>gi|356569585|ref|XP_003552979.1| PREDICTED: armadillo repeat-containing protein 8-like [Glycine max]
Length = 649
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 23 LKNQIIGSQTKKLSFLKK-----------------LYRLILPPSRFTCGFE-AIQAMLDA 64
+KN IIG++TKK S++K + + F CG + ++A+LDA
Sbjct: 30 VKNHIIGNRTKKHSYIKLGAVPVVAAALADSDPNLIVQSAAALGSFACGVDDGVRAVLDA 89
Query: 65 GLFPDLSLIFSRRDEQVADT 84
G FP L + S DE+V D
Sbjct: 90 GAFPRLIGLLSAHDEKVVDA 109
>gi|302792715|ref|XP_002978123.1| hypothetical protein SELMODRAFT_418097 [Selaginella moellendorffii]
gi|300154144|gb|EFJ20780.1| hypothetical protein SELMODRAFT_418097 [Selaginella moellendorffii]
Length = 922
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Query: 15 SSSRLN--NRLKNQIIGSQTKKLSFLK------------------KLYRLILPPSRFTCG 54
+S+RL +KNQIIG++TKKLS++K L + F CG
Sbjct: 22 TSARLKALRDVKNQIIGNKTKKLSYIKLGAVPRVVEILASDTDIPLLVQSAAAVGSFACG 81
Query: 55 FEA-IQAMLDAGLFPDLSLIFSRRDEQVAD 83
+A ++A+LD+G+ P L + S + +V +
Sbjct: 82 TDAGVKAVLDSGVLPHLLRMLSNGNNKVVE 111
>gi|302766399|ref|XP_002966620.1| hypothetical protein SELMODRAFT_439598 [Selaginella moellendorffii]
gi|300166040|gb|EFJ32647.1| hypothetical protein SELMODRAFT_439598 [Selaginella moellendorffii]
Length = 919
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Query: 15 SSSRLN--NRLKNQIIGSQTKKLSFLK------------------KLYRLILPPSRFTCG 54
+S+RL +KNQIIG++TKKLS++K L + F CG
Sbjct: 22 TSARLKALRDVKNQIIGNKTKKLSYIKLGAVPRVVEILASDTDIPLLVQSAAAVGSFACG 81
Query: 55 FEA-IQAMLDAGLFPDLSLIFSRRDEQVAD 83
+A ++A+LD+G+ P L + S + +V +
Sbjct: 82 TDAGVKAVLDSGVLPHLLRMLSNGNNKVVE 111
>gi|343925795|ref|ZP_08765310.1| putative glycosyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343764146|dbj|GAA12236.1| putative glycosyltransferase [Gordonia alkanivorans NBRC 16433]
Length = 417
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 3 IKPQLWATATKTSSSRLNNRLKNQIIGSQTKKLSFLKKLYRLILPPS---RFT---CGFE 56
+ P + ++ S + RL + K F+ + Y LIL + RF+ CGF+
Sbjct: 125 LMPLIAPLVSRHSDIAIGTRLSRSSRVVRGPKREFISRSYNLILRTAMGARFSDAQCGFK 184
Query: 57 AIQAMLDAGLFP---DLSLIFSRRDEQVADTMLLCKAEAGGMHMRQSSNVEVPNGSDHDY 113
A++ + GL P D F DT LL AE G+ + EVP D
Sbjct: 185 AMRTDIARGLLPFVVDTGWFF--------DTELLVLAEQIGLRI-----AEVPVDWVDDQ 231
Query: 114 DSVVPLDPSKNSLNNECGIIYLSLILAEI 142
DS+V + P+ + C + L+L + +
Sbjct: 232 DSIVDIVPTALADLKGCARVGLALAMGRL 260
>gi|357112948|ref|XP_003558267.1| PREDICTED: uncharacterized protein LOC100840558 [Brachypodium
distachyon]
Length = 440
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 4 KPQLWATATKTSSSRLNNRLKNQIIGSQTKKLSFLKKLYRLILPPSRFTCGFEAIQAMLD 63
KP+LW S +++ ++ QT + + PP + + ML
Sbjct: 186 KPELWCLELVVSGCKISAGSDGKVAWRQTP----WHQSHASRGPPRPLRRSLQGLDPMLT 241
Query: 64 AGLFPDLSLIFSRRDEQVADTMLL-CKAEAGGMHMRQSSNVEV 105
A LF D S+ R + D +L +AEA + R SS+VE+
Sbjct: 242 ASLFADDSVCIGERSIEGEDCFVLKVEAEASSLRARNSSSVEI 284
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,210,892,526
Number of Sequences: 23463169
Number of extensions: 78367822
Number of successful extensions: 165266
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 165254
Number of HSP's gapped (non-prelim): 23
length of query: 151
length of database: 8,064,228,071
effective HSP length: 114
effective length of query: 37
effective length of database: 9,684,394,101
effective search space: 358322581737
effective search space used: 358322581737
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)