Query 041566
Match_columns 687
No_of_seqs 573 out of 3958
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:17:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 2.7E-41 9.1E-46 400.6 43.1 424 148-595 65-512 (802)
2 3bcv_A Putative glycosyltransf 99.9 5.1E-24 1.7E-28 215.4 17.5 204 231-447 3-222 (240)
3 1qg8_A Protein (spore coat pol 99.9 9E-25 3.1E-29 223.2 10.7 215 233-468 1-235 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 7.7E-24 2.6E-28 236.8 18.6 243 229-479 25-300 (472)
5 2z86_A Chondroitin synthase; G 99.9 8.9E-23 3E-27 236.1 22.6 220 230-458 90-338 (625)
6 2d7i_A Polypeptide N-acetylgal 99.9 5.8E-23 2E-27 235.0 15.3 239 229-476 108-375 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 2.7E-22 9.2E-27 226.1 16.0 238 229-478 62-331 (501)
8 2z86_A Chondroitin synthase; G 99.9 7.5E-22 2.6E-26 228.3 15.5 217 230-467 372-592 (625)
9 3ckj_A Putative uncharacterize 99.9 1.1E-20 3.8E-25 201.4 18.7 203 231-449 46-263 (329)
10 4fix_A UDP-galactofuranosyl tr 99.8 5.9E-21 2E-25 220.7 16.1 228 231-465 178-438 (657)
11 3f1y_A Mannosyl-3-phosphoglyce 99.8 4.1E-18 1.4E-22 185.1 19.0 196 232-446 93-305 (387)
12 3l7i_A Teichoic acid biosynthe 99.8 2.8E-20 9.7E-25 218.9 0.0 199 232-446 1-202 (729)
13 2fy7_A Beta-1,4-galactosyltran 99.7 6.5E-18 2.2E-22 176.1 6.3 178 231-472 63-262 (287)
14 2nxv_A ATP synthase subunits r 99.7 1.3E-16 4.3E-21 163.2 14.3 183 231-451 14-204 (249)
15 2bo4_A Mannosylglycerate synth 99.5 6.6E-14 2.3E-18 151.9 15.1 197 236-444 3-211 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.0 1.2E-09 4E-14 113.8 11.2 104 232-343 52-179 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 98.8 1.1E-08 3.8E-13 109.4 10.4 106 233-349 51-185 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.8 1E-08 3.5E-13 108.8 9.7 185 233-449 2-211 (343)
19 3lw6_A FI08434P, beta-4-galact 97.0 0.0035 1.2E-07 63.4 10.8 178 232-472 50-249 (287)
20 2c0n_A A197; thermophil protei 94.5 0.084 2.9E-06 50.4 7.5 103 321-439 51-165 (203)
21 3cu0_A Galactosylgalactosylxyl 93.1 0.59 2E-05 47.1 11.1 104 229-343 17-152 (281)
22 1v84_A Galactosylgalactosylxyl 93.1 0.36 1.2E-05 48.1 9.5 102 232-344 2-127 (253)
23 2d0j_A Galactosylgalactosylxyl 91.9 0.78 2.7E-05 45.5 10.2 101 232-343 2-120 (246)
24 3tqd_A 3-deoxy-manno-octuloson 88.8 3 0.0001 41.7 11.7 182 246-443 35-234 (256)
25 4fcu_A 3-deoxy-manno-octuloson 85.3 2.8 9.4E-05 41.9 9.1 181 245-443 26-226 (253)
26 2wee_A MOBA-related protein; u 82.2 5.4 0.00018 37.3 9.4 92 244-350 30-122 (197)
27 3k8d_A 3-deoxy-manno-octuloson 82.1 8.8 0.0003 38.4 11.3 177 246-442 44-240 (264)
28 2waw_A MOBA relate protein; un 81.3 6.3 0.00021 36.8 9.5 90 244-347 30-120 (199)
29 1omz_A Alpha-1,4-N-acetylhexos 80.3 8.1 0.00028 39.3 10.2 115 232-360 27-142 (293)
30 3oam_A 3-deoxy-manno-octuloson 79.3 12 0.0004 36.9 11.1 99 246-359 28-128 (252)
31 2y6p_A 3-deoxy-manno-octuloson 77.7 17 0.00057 34.9 11.5 91 244-354 26-117 (234)
32 1qwj_A Cytidine monophospho-N- 74.0 32 0.0011 33.0 12.4 93 245-351 28-123 (229)
33 3st8_A Bifunctional protein GL 67.8 28 0.00095 38.0 11.5 113 238-359 34-148 (501)
34 3ngw_A Molybdopterin-guanine d 67.5 21 0.00072 34.1 9.2 86 243-350 24-110 (208)
35 1vic_A 3-deoxy-manno-octuloson 67.5 35 0.0012 33.5 11.2 92 244-350 26-118 (262)
36 1h7e_A 3-deoxy-manno-octuloson 66.8 48 0.0017 31.8 12.0 91 244-351 26-117 (245)
37 4fce_A Bifunctional protein GL 64.6 33 0.0011 36.6 11.2 97 245-358 36-133 (459)
38 3f1c_A Putative 2-C-methyl-D-e 62.4 30 0.001 33.7 9.5 98 244-351 31-133 (246)
39 1ezi_A CMP-N-acetylneuraminic 62.0 34 0.0012 32.6 9.7 92 244-350 28-124 (228)
40 2qh5_A PMI, ALGA, mannose-6-ph 61.1 44 0.0015 33.8 10.8 95 239-347 31-128 (308)
41 3q80_A 2-C-methyl-D-erythritol 61.1 58 0.002 31.6 11.2 97 243-354 33-131 (231)
42 3juk_A UDP-glucose pyrophospho 59.5 8.9 0.00031 38.3 5.1 102 239-350 28-151 (281)
43 3tzt_A Glycosyl transferase fa 59.4 38 0.0013 33.9 9.7 100 234-338 5-115 (276)
44 2v0h_A Bifunctional protein GL 59.4 58 0.002 34.6 12.0 97 245-358 33-130 (456)
45 1vgw_A 4-diphosphocytidyl-2C-m 58.9 66 0.0022 30.5 11.2 97 243-352 32-133 (231)
46 2j0a_A Beta-1,3-N-acetylglucos 56.9 8.6 0.00029 38.9 4.4 108 322-443 92-210 (280)
47 3d5n_A Q97W15_sulso; NESG, SSR 56.5 15 0.00052 34.5 5.9 85 244-348 27-112 (197)
48 1e5k_A Molybdopterin-guanine d 52.6 38 0.0013 31.8 8.1 84 244-347 32-116 (201)
49 3pnn_A Conserved domain protei 52.5 84 0.0029 31.6 11.2 100 239-350 26-141 (303)
50 3rsb_A Adenosylcobinamide-phos 51.4 29 0.00099 32.2 6.9 93 244-350 26-119 (196)
51 2vsh_A TARI, 2-C-methyl-D-eryt 51.4 52 0.0018 31.3 9.0 98 244-351 30-134 (236)
52 2xwl_A 2-C-methyl-D-erythritol 47.5 94 0.0032 29.1 10.1 89 244-348 29-118 (223)
53 1i52_A 4-diphosphocytidyl-2-C- 45.3 85 0.0029 29.9 9.5 94 244-352 34-128 (236)
54 4ecm_A Glucose-1-phosphate thy 45.2 26 0.00089 34.7 5.7 93 245-350 55-148 (269)
55 2yc3_A 2-C-methyl-D-erythritol 44.2 75 0.0026 30.0 8.8 93 245-350 32-125 (228)
56 2ux8_A Glucose-1-phosphate uri 44.1 27 0.00092 35.1 5.8 98 245-350 45-160 (297)
57 1g9r_A Glycosyl transferase; a 42.5 31 0.0011 35.1 5.9 88 246-339 13-111 (311)
58 2e3d_A UTP--glucose-1-phosphat 36.7 57 0.0019 32.7 6.8 102 240-350 35-161 (302)
59 1w55_A ISPD/ISPF bifunctional 34.7 1.1E+02 0.0039 31.9 8.9 87 244-351 30-117 (371)
60 2pa4_A UTP-glucose-1-phosphate 32.8 83 0.0029 31.9 7.4 101 245-351 43-161 (323)
61 1hm9_A GLMU, UDP-N-acetylgluco 32.7 93 0.0032 33.1 8.1 94 240-350 35-129 (468)
62 3cgx_A Putative nucleotide-dip 31.4 2.9E+02 0.0098 26.7 10.8 48 303-350 82-130 (242)
63 2dpw_A Hypothetical protein TT 31.4 1.6E+02 0.0054 28.0 8.8 79 244-350 31-110 (232)
64 1lvw_A Glucose-1-phosphate thy 30.8 1.4E+02 0.0047 29.9 8.6 98 239-349 29-127 (295)
65 2e8b_A Probable molybdopterin- 30.1 1.4E+02 0.0048 27.7 8.0 78 246-345 41-120 (201)
66 1ll2_A Glycogenin-1; protein-s 25.9 2.6E+02 0.0088 28.6 9.7 89 241-338 10-109 (333)
67 1fxo_A Glucose-1-phosphate thy 24.1 1.1E+02 0.0037 30.7 6.3 98 239-349 28-126 (293)
68 2l82_A Designed protein OR32; 23.9 2.4E+02 0.0081 23.8 7.1 50 244-299 60-109 (162)
69 2xme_A CTP-inositol-1-phosphat 22.8 1.1E+02 0.0036 29.1 5.7 86 245-346 45-130 (232)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.7e-41 Score=400.55 Aligned_cols=424 Identities=24% Similarity=0.286 Sum_probs=276.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccCCCCCCCCC
Q 041566 148 SPPTAETAELMVEFVYATWLQVRADY-LAPPLKSLGHTCIVLFLIQSLDRLVLVIGCAWIKFKKVKPKAAMAYPVGKGDD 226 (687)
Q Consensus 148 ~~~~~~~i~~~~~~~y~~w~~~r~~~-~~p~l~~l~~~~l~l~li~~i~~li~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 226 (687)
++.+++.+.+.+..+|+.|+..-... ...++..+ +.+.++++..+..+...+..+.. . ++.++... +.
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~--~~~~ll~~~~~~~~~~l~~~~~~-~---~~~~r~~~-----~~ 133 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFL--FALLLFAVETFSISIFFLNGFLS-A---DPTDRPFP-----RP 133 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHH--HHHHHHHHHHHHHHHHHHHHHHT-T---SCCCCCCC-----CC
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHH--HHHHHHHHHHHHHHHHHHHHHHH-h---cccCCCCC-----CC
Confidence 35677778888899999997654432 22222222 22233333333333333332222 1 11111111 11
Q ss_pred CCCCCCCeEEEEeecCCchH-HHHHHHHHHHcCCCCCCceEEEEEcCCCChhHH-----HHHHH------HHHHH-hhcC
Q 041566 227 EDLEDYPMVLVQIPMCNERE-VYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQ-----LLIKA------EVLKW-QQRG 293 (687)
Q Consensus 227 ~~~~~~P~VsViIP~yNE~~-~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~-----~~l~~------~~~~~-~~~~ 293 (687)
.+++..|+|+|+||+|||++ .+++||+|+.+|+||++++||+|+||||+|++. +.+++ ..+++ .+.+
T Consensus 134 ~~~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~ 213 (802)
T 4hg6_A 134 LQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG 213 (802)
T ss_dssp CCTTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC
Confidence 13466899999999999995 459999999999999988999999999999883 22221 11111 1234
Q ss_pred cEEEEEeccCCCCChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHH
Q 041566 294 VHIIYRHRLIRSGYKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTR 373 (687)
Q Consensus 294 v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r 373 (687)
+ .+..++++++||++|+|.|++ .+++|||+++|+|++++||+++++++.|++||++++|+++..+.+.+. ....
T Consensus 214 v--~~i~~~~~~~GKa~alN~gl~---~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~ 287 (802)
T 4hg6_A 214 V--VYSTRERNEHAKAGNMSAALE---RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRN 287 (802)
T ss_dssp C--EEEECSSCCSHHHHHHHHHHH---HCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHH
T ss_pred c--EEEEecCCCCcchHHHHHHHH---hcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhhh
Confidence 4 455677777889999999999 689999999999999999999999999987899999999988877642 1111
Q ss_pred hhhh-----hhhhhHHHHHhhccccccccccccceEEEehhhhhhhCCCCCCCccchHHHHHHHHHcCCeEEEEcceEEe
Q 041566 374 LQNI-----NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTTVEDMDIAVRAHLCGWKFVYVNDVKCL 448 (687)
Q Consensus 374 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~l~~rl~~~G~ri~~~~~a~~~ 448 (687)
.... +....+...+...+.... ..++|+++++||++++++|||++..++||.+++.++.++||++.|+|++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~ 366 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRWGG-AFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIA 366 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHTTC-CCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEE
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhcCC-ceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEE
Confidence 1100 011111112211111111 2268999999999999999999999999999999999999999999999999
Q ss_pred eccCcCHHHHHHHHHHhhcccHHHHHHHhHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhh-hcccc
Q 041566 449 CELPESYEAYKKQQHRWHSGPMQLFRMCFIDIIRSKVSWAKKANLIFLFFLLRKLVL-PFYSFTLFCIILPLTM-FIPEA 526 (687)
Q Consensus 449 ~e~P~t~~~~~~Qr~RW~~G~~q~~~~~~~~~l~~~l~~~~k~~~~~~~~ll~~li~-p~~~f~l~~~~~p~~~-~~~~~ 526 (687)
++.|+|++++++||+||.+|.+|+++++.+ ++.+++++.+++.++..+.. .+.. +...+.+..+...+.. .....
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~p-l~~~~l~~~~rl~~l~~~~~--~~~~~~~li~ll~p~~~ll~~~~~~~~ 443 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLLLKNP-LFRRGLGIAQRLCYLNSMSF--WFFPLVRMMFLVAPLIYLFFGIEIFVA 443 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHHHSCT-TSCSSCCHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHHHhCc-cccCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 999999999999999999999999887643 44557777777765533221 1111 1111111111110000 00111
Q ss_pred hhHHHHHHHHHHHH---HHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccEEEeecCCCC
Q 041566 527 ELPAWVVSYVPGFM---SILNILPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRS 595 (687)
Q Consensus 527 ~l~~~~~~~~p~~i---~~l~~~~~~~~~~~~~p~~lf~~~~s~~~~~A~i~gl~~~g~~~~w~vT~k~~~~ 595 (687)
....+...++|.++ .+...+.....+.++ ..+++..+++..+.+++.++++. +..+|.||+|+++.
T Consensus 444 ~~~~~~~~~lp~~l~~~~~~~~~~~~~r~~~~--~~l~~~~~~~~~~~a~l~~l~~~-~~~~f~VT~Kg~~~ 512 (802)
T 4hg6_A 444 TFEEVLAYMPGYLAVSFLVQNALFARQRWPLV--SEVYEVAQAPYLARAIVTTLLRP-RSARFAVTAKDETL 512 (802)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTTSCTTH--HHHHHHHHHHHHHHHHHHHHHST-TCCCCCCCCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH--HHHHHHHHHHHHHHHHHHHHhCC-CCCcceECCCCccc
Confidence 22222333333222 223334444444433 24566777888889999999984 47899999997654
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.91 E-value=5.1e-24 Score=215.39 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=142.0
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHh
Q 041566 231 DYPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAG 310 (687)
Q Consensus 231 ~~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~ 310 (687)
..|+|||+||+||+++.+++||+|+++|+||+ +||+||||+|+|.+.+++++..++ ..++.+.+ . .+.|++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~----~~~i~~i~-~-~n~G~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQ----YPNIKVIH-K-KNAGLGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHH----CSSEEEEE-C-CCCCHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhh----CCCEEEEE-C-CCCChHH
Confidence 36889999999999999999999999999985 889999999999999988876553 23444444 3 3566999
Q ss_pred HHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCC----hhHHhh-hhhhhhhHHH
Q 041566 311 NLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDEN----LLTRLQ-NINLSFHFEV 385 (687)
Q Consensus 311 aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~----~~~r~~-~~~~~~~~~~ 385 (687)
|+|.|++ .+++|||+++|+|+.++|++|++++..+.+ ++.+++.+.....+.++. +..... ...+. ....
T Consensus 75 a~N~g~~---~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 149 (240)
T 3bcv_A 75 ACNSGLD---VATGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKN-KNEI 149 (240)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECS-HHHH
T ss_pred HHHHHHH---HcCCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccC-HHHH
Confidence 9999999 689999999999999999999999999986 344455554333332221 110000 00000 0000
Q ss_pred HHhhccccc--------cccccccceEEEehhhhhhhC-CCCCC--CccchHHHHHHHHHcCCeEEEEcceEE
Q 041566 386 EQQVNGVFI--------NFFGFNGTAGVWRIKALEECG-GWLDR--TTVEDMDIAVRAHLCGWKFVYVNDVKC 447 (687)
Q Consensus 386 ~~~~~~~~~--------~~~~~~G~~~~~Rr~aL~~iG-Gf~~~--~~~ED~~l~~rl~~~G~ri~~~~~a~~ 447 (687)
......... .....+|++.++||++++++| ||++. ...||.+++.|+..+|+++.++|++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~ 222 (240)
T 3bcv_A 150 HTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFY 222 (240)
T ss_dssp HHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC----
T ss_pred HHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeE
Confidence 000111110 011245788999999999999 99876 357999999999999999999998753
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.91 E-value=9e-25 Score=223.22 Aligned_cols=215 Identities=15% Similarity=0.162 Sum_probs=154.7
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccC-------CC
Q 041566 233 PMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLI-------RS 305 (687)
Q Consensus 233 P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~-------~~ 305 (687)
|+|||+||+||+++.+++||+|+++|+||+ +||+||||+|+|.+.+++++..+ +.++.+...+. .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~~-----~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN-----DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG-----STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHhh-----cCCEEEEecccccccccccc
Confidence 689999999999999999999999999985 88999999999999988775422 34455554441 35
Q ss_pred CChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeec--cCCCChhHHhhhhhhhhhH
Q 041566 306 GYKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFV--NKDENLLTRLQNINLSFHF 383 (687)
Q Consensus 306 ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~--n~~~~~~~r~~~~~~~~~~ 383 (687)
.|++.|+|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|++..... +.+............
T Consensus 74 ~G~~~a~N~gi~---~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---- 146 (255)
T 1qg8_A 74 TRYAALINQAIE---MAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAA---- 146 (255)
T ss_dssp CHHHHHHHHHHH---HCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCC----
T ss_pred cCHHHHHHHHHH---HcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchH----
Confidence 569999999999 68999999999999999999999999999889999999987765 443322111100000
Q ss_pred HHHHhhccccccccccccceEEEehhhhhhhC-CC------CC-CCccchHHHHHHHHHcCCeEEEEcceEEe-eccCcC
Q 041566 384 EVEQQVNGVFINFFGFNGTAGVWRIKALEECG-GW------LD-RTTVEDMDIAVRAHLCGWKFVYVNDVKCL-CELPES 454 (687)
Q Consensus 384 ~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iG-Gf------~~-~~~~ED~~l~~rl~~~G~ri~~~~~a~~~-~e~P~t 454 (687)
.... .....+.|+++++||++++++| || ++ ....||.+++.++..+| ++.++|++.+. ...+.+
T Consensus 147 ----~~~~--~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s 219 (255)
T 1qg8_A 147 ----QVTW--NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQS 219 (255)
T ss_dssp ----SCBS--CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC---
T ss_pred ----HHHH--hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCc
Confidence 0000 1222367889999999999998 78 33 34579999999999987 79999988754 334555
Q ss_pred HHH--HHHHHHHhhcc
Q 041566 455 YEA--YKKQQHRWHSG 468 (687)
Q Consensus 455 ~~~--~~~Qr~RW~~G 468 (687)
... ..+++.+|.+.
T Consensus 220 ~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 220 IHFQLFELEKNEFVRN 235 (255)
T ss_dssp -----------CTGGG
T ss_pred cchhHHHHHHHHHHHh
Confidence 443 34566667664
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.91 E-value=7.7e-24 Score=236.84 Aligned_cols=243 Identities=14% Similarity=0.119 Sum_probs=173.9
Q ss_pred CCCCCeEEEEeecCCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCCCh-hHHHHHHHHHHHHhhcCcEEEEEeccCCCC
Q 041566 229 LEDYPMVLVQIPMCNER-EVYGQSIAAVCIQDWPKERMLVQILDDSDDL-DVQLLIKAEVLKWQQRGVHIIYRHRLIRSG 306 (687)
Q Consensus 229 ~~~~P~VsViIP~yNE~-~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d-~t~~~l~~~~~~~~~~~v~i~~~~r~~~~g 306 (687)
++..|+||||||+|||+ +.+.++|+|+++|+||...+||+||||+|+| .+.+.+++..++ .+.++.++..+.+.
T Consensus 25 ~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~---~~~~v~vi~~~~n~- 100 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK---LKVPVHVIRMEQRS- 100 (472)
T ss_dssp CSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHS---SSSCEEEEECSSCC-
T ss_pred CcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHH---CCCcEEEEECCCCC-
Confidence 45689999999999999 9999999999999998766799999999998 488888776542 22145555545444
Q ss_pred ChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChh-------HHhhhhhh
Q 041566 307 YKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLL-------TRLQNINL 379 (687)
Q Consensus 307 gKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~-------~r~~~~~~ 379 (687)
|+++|+|.|++ .+++|||+++|+|++++|++|++++..+.++|+++++ +.....+.+.... ........
T Consensus 101 G~~~a~N~g~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (472)
T 1xhb_A 101 GLIRARLKGAA---VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWKL 176 (472)
T ss_dssp CHHHHHHHHHH---HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTTC
T ss_pred ChHHHHHHHHH---hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeeccc
Confidence 59999999999 6899999999999999999999999999987876544 4433333221100 00000000
Q ss_pred hh---hH-H--HHHhhcc--ccccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEEEEcceEEe
Q 041566 380 SF---HF-E--VEQQVNG--VFINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFVYVNDVKCL 448 (687)
Q Consensus 380 ~~---~~-~--~~~~~~~--~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~~~~~a~~~ 448 (687)
.+ .. . ....... .......+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~ 256 (472)
T 1xhb_A 177 NFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVG 256 (472)
T ss_dssp CEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEE
T ss_pred eeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEE
Confidence 00 00 0 0000000 0112223678999999999999999998765 69999999999999999999999887
Q ss_pred eccCcC-------------HHHHHHHHHHhhcccHHHHHHHhHH
Q 041566 449 CELPES-------------YEAYKKQQHRWHSGPMQLFRMCFID 479 (687)
Q Consensus 449 ~e~P~t-------------~~~~~~Qr~RW~~G~~q~~~~~~~~ 479 (687)
+....+ .+...+...+|..+..+.+....+.
T Consensus 257 H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~ 300 (472)
T 1xhb_A 257 HVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPG 300 (472)
T ss_dssp EEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTT
T ss_pred EEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 654332 2355666778999988877665443
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.90 E-value=8.9e-23 Score=236.10 Aligned_cols=220 Identities=20% Similarity=0.210 Sum_probs=164.1
Q ss_pred CCCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChH
Q 041566 230 EDYPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKA 309 (687)
Q Consensus 230 ~~~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa 309 (687)
...|+|+|+||+|||++.+.++|+|+.+|++|. .+||+||||+|+|.+.+++++.. ...++.++.++++.+|++
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~-----~~~~i~~i~~~~~~~g~~ 163 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFE-----SLLNIKYVRQKDYGYQLC 163 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTT-----TTSCEEEEEECCCSCCHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhh-----hcCCeEEEEeCCCCcchh
Confidence 346899999999999999999999999998875 58999999999999988887532 223455555555555799
Q ss_pred hHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhh---------
Q 041566 310 GNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLS--------- 380 (687)
Q Consensus 310 ~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~--------- 380 (687)
+|+|.|++ .+++|||+++|+|+.++|++|++++..+..+|+++++++.....+...............
T Consensus 164 ~a~N~g~~---~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (625)
T 2z86_A 164 AVRNLGLR---AAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITN 240 (625)
T ss_dssp HHHHHHHH---HCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC----
T ss_pred HHHHHHHH---hCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccC
Confidence 99999999 689999999999999999999999999998899988888765544432222111110000
Q ss_pred --------------hhHHHHH---hhccccccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEE
Q 041566 381 --------------FHFEVEQ---QVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFV 440 (687)
Q Consensus 381 --------------~~~~~~~---~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~ 440 (687)
....... ...........++|+++++||++++++|||++... .||.+++.|+.++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~ 320 (625)
T 2z86_A 241 NQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFR 320 (625)
T ss_dssp -----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEE
T ss_pred CchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEE
Confidence 0000000 00111112223789999999999999999998664 599999999999999999
Q ss_pred EEcceEEeeccCcCHHHH
Q 041566 441 YVNDVKCLCELPESYEAY 458 (687)
Q Consensus 441 ~~~~a~~~~e~P~t~~~~ 458 (687)
++|++.+++..|.+....
T Consensus 321 ~~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 321 SVEGAMAYHQEPPGKENE 338 (625)
T ss_dssp ECGGGCEEEECCC-----
T ss_pred EcccchhhccCCccccch
Confidence 999999998887765433
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.89 E-value=5.8e-23 Score=234.96 Aligned_cols=239 Identities=13% Similarity=0.113 Sum_probs=172.0
Q ss_pred CCCCCeEEEEeecCCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhH-HHHHHHHHHHHhhcCcEEEEEeccCCCC
Q 041566 229 LEDYPMVLVQIPMCNER-EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDV-QLLIKAEVLKWQQRGVHIIYRHRLIRSG 306 (687)
Q Consensus 229 ~~~~P~VsViIP~yNE~-~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t-~~~l~~~~~~~~~~~v~i~~~~r~~~~g 306 (687)
++..|+||||||+|||+ +.+.+||+|+++|+||...+|||||||+|+|.+ .+++++..++ ..++.++..+. +.
T Consensus 108 ~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~----~~~v~vi~~~~-n~ 182 (570)
T 2d7i_A 108 LETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMAL----FPSVRILRTKK-RE 182 (570)
T ss_dssp ESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTT----STTEEEEECSS-CC
T ss_pred CCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHh----CCeEEEEECCC-CC
Confidence 35689999999999998 999999999999999875569999999999999 8888765542 23455554444 45
Q ss_pred ChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHh--h----hhhhh
Q 041566 307 YKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRL--Q----NINLS 380 (687)
Q Consensus 307 gKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~--~----~~~~~ 380 (687)
|++.|+|.|++ .+++|||+++|+|+.++|++|+.++..+.+++++ +|++.....+.+....... . .+...
T Consensus 183 G~~~A~N~G~~---~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (570)
T 2d7i_A 183 GLIRTRMLGAS---VATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWE 258 (570)
T ss_dssp CHHHHHHHHHH---HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTT
T ss_pred CHHHHHHHHHH---hcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCccccccccc
Confidence 59999999999 6899999999999999999999999999987765 5666554444322100000 0 00000
Q ss_pred hhHH---HHH--hhc--cccccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEEEEcceEEeec
Q 041566 381 FHFE---VEQ--QVN--GVFINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFVYVNDVKCLCE 450 (687)
Q Consensus 381 ~~~~---~~~--~~~--~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~~~~~a~~~~e 450 (687)
..+. ... ... ........++|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.+.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 338 (570)
T 2d7i_A 259 MYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHI 338 (570)
T ss_dssp CCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred ccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEE
Confidence 0000 000 000 00011223679999999999999999998664 6999999999999999999999998774
Q ss_pred c----CcC-------HHHHHHHHHHhhcccHHHHHHH
Q 041566 451 L----PES-------YEAYKKQQHRWHSGPMQLFRMC 476 (687)
Q Consensus 451 ~----P~t-------~~~~~~Qr~RW~~G~~q~~~~~ 476 (687)
. |.+ .+...+-..+|.......+...
T Consensus 339 ~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~ 375 (570)
T 2d7i_A 339 YRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 375 (570)
T ss_dssp CCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT
T ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 211 3456666788988877665443
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.88 E-value=2.7e-22 Score=226.10 Aligned_cols=238 Identities=13% Similarity=0.095 Sum_probs=165.8
Q ss_pred CCCCCeEEEEeecCCchH-HHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCC
Q 041566 229 LEDYPMVLVQIPMCNERE-VYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGY 307 (687)
Q Consensus 229 ~~~~P~VsViIP~yNE~~-~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~gg 307 (687)
++..|+||||||+|||++ .+.++|+|+++|++|...+|||||||+|+|.+.+... ....++.++..+. +.|
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~-------~~~~~v~vi~~~~-n~G 133 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL-------GKIEKVRVLRNDR-REG 133 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-------GGBTTEEEEECSS-CCH
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-------hcCCCEEEEECCC-CcC
Confidence 456899999999999996 9999999999999987557999999999998853221 1233455554444 445
Q ss_pred hHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChh-------HHhhhhhhh
Q 041566 308 KAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLL-------TRLQNINLS 380 (687)
Q Consensus 308 Ka~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~-------~r~~~~~~~ 380 (687)
++.|+|.|++ .+++|||+++|+|++++|++|+.++..+.+++. ++|++.....+.+.-.. .........
T Consensus 134 ~~~A~N~G~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (501)
T 2ffu_A 134 LMRSRVRGAD---AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLV 209 (501)
T ss_dssp HHHHHHHHHH---HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCC
T ss_pred HHHHHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCC
Confidence 9999999999 789999999999999999999999999997665 57776654443321000 000000000
Q ss_pred h---hHHHH---Hhhccc--cccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEEEEcceEEee
Q 041566 381 F---HFEVE---QQVNGV--FINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFVYVNDVKCLC 449 (687)
Q Consensus 381 ~---~~~~~---~~~~~~--~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~~~~~a~~~~ 449 (687)
+ ..... ...... ......+.|++.++||++++++|||++... +||.++++|+.+.|+++.++|.+.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 289 (501)
T 2ffu_A 210 FKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGH 289 (501)
T ss_dssp EEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEE
Confidence 0 00000 000000 111123578899999999999999998654 899999999999999999999998877
Q ss_pred cc--------CcC-----HHHHHHHHHHhhcccHHHHHHHhH
Q 041566 450 EL--------PES-----YEAYKKQQHRWHSGPMQLFRMCFI 478 (687)
Q Consensus 450 e~--------P~t-----~~~~~~Qr~RW~~G~~q~~~~~~~ 478 (687)
.. |.. ...+.+...+|..+..+.+....|
T Consensus 290 ~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p 331 (501)
T 2ffu_A 290 VFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVP 331 (501)
T ss_dssp CCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCG
T ss_pred EccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 52 212 133444456677776665544433
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.86 E-value=7.5e-22 Score=228.33 Aligned_cols=217 Identities=16% Similarity=0.172 Sum_probs=164.3
Q ss_pred CCCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChH
Q 041566 230 EDYPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKA 309 (687)
Q Consensus 230 ~~~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa 309 (687)
...|.|+|+||+||+++.+++||+|+++|+||+ +||+||||+|+|.|.+++++..+ ...++.++. . .+.|++
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~~----~~~~i~~~~-~-~n~G~~ 443 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHYA----NHPRVRFIS-Q-KNKGIG 443 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHHT----TCTTEEEEE-E-CCCCHH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHHh----hCCcEEEEe-C-CCCCHH
Confidence 346899999999999999999999999999985 88999999999999988876543 233444443 3 455699
Q ss_pred hHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHHHHhh
Q 041566 310 GNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQV 389 (687)
Q Consensus 310 ~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~~~~~ 389 (687)
+|+|.|++ .+++|||+++|+|++++|++|++++..+..+|++++|++.....+.++.......... .+.... .
T Consensus 444 ~a~n~g~~---~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~ 516 (625)
T 2z86_A 444 SASNTAVR---LCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP---IYSREK-L 516 (625)
T ss_dssp HHHHHHHH---HCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS---SCCHHH-H
T ss_pred HHHHHHHH---hcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc---cCCHHH-H
Confidence 99999999 6899999999999999999999999999878999999998776665544322111100 001111 1
Q ss_pred ccccccccccccceEEEehhhhhhhCCCCCCC-ccchHHHHHHHHHcCCeEEEEcceEEe---eccCcCHHHHHHHHHHh
Q 041566 390 NGVFINFFGFNGTAGVWRIKALEECGGWLDRT-TVEDMDIAVRAHLCGWKFVYVNDVKCL---CELPESYEAYKKQQHRW 465 (687)
Q Consensus 390 ~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~-~~ED~~l~~rl~~~G~ri~~~~~a~~~---~e~P~t~~~~~~Qr~RW 465 (687)
.. ..++|+++++||++++++|||++.. ..||.++++|+.+.| ++.++|++.++ +....+.+...+|+.+|
T Consensus 517 ~~-----~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~ 590 (625)
T 2z86_A 517 TS-----AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENH 590 (625)
T ss_dssp TT-----SCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHH
T ss_pred hh-----cccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHH
Confidence 11 1257888999999999999998753 579999999999999 99999998754 33344555556666655
Q ss_pred hc
Q 041566 466 HS 467 (687)
Q Consensus 466 ~~ 467 (687)
.+
T Consensus 591 ~~ 592 (625)
T 2z86_A 591 FK 592 (625)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.85 E-value=1.1e-20 Score=201.44 Aligned_cols=203 Identities=14% Similarity=0.087 Sum_probs=143.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEE----eccCCCC
Q 041566 231 DYPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYR----HRLIRSG 306 (687)
Q Consensus 231 ~~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~----~r~~~~g 306 (687)
..|+|||+||+|||++.++++|+|+.+|+||. ..||+||||+|+|.|.+++++ .+.++... .+...+.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~-------~~~~~~~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA-------AGARVVSREQALPEVPIRP 117 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH-------TTCEEEEHHHHCTTSCCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH-------hhhhhccceeeeccCCCCC
Confidence 45899999999999999999999999999985 478999999999999988874 23332211 1134456
Q ss_pred ChHhHHHHHhcccccCCccEEEEEcCCCC-CCHHHHHHHHHHHccCCCeEEEeeeeeeccC-CC-------ChhHHhhhh
Q 041566 307 YKAGNLNSAMGCDYVKDYEFVAIFDADFQ-PTPDFLKKTIPYFKGNDDLALVQTRWSFVNK-DE-------NLLTRLQNI 377 (687)
Q Consensus 307 gKa~aLn~gl~~~~~a~~d~V~~lDaD~~-~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~-~~-------~~~~r~~~~ 377 (687)
||+.|+|.|++ .+++|||+++|+|++ ++|++|++++..+..+|++++|+|....... ++ ....+....
T Consensus 118 G~~~a~n~g~~---~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (329)
T 3ckj_A 118 GKGEALWRSLA---ASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTEL 194 (329)
T ss_dssp SHHHHHHHHHH---HCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHH
T ss_pred CHHHHHHHHHH---hCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehh
Confidence 79999999999 689999999999999 8999999999997767999999987543221 10 111111110
Q ss_pred hhhhhHHHHHhhccccccccccccceEEEehhhhhhhCCCCCCCccchHHHHHHHHH-cCCe-EEEEcceEEee
Q 041566 378 NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTTVEDMDIAVRAHL-CGWK-FVYVNDVKCLC 449 (687)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~l~~rl~~-~G~r-i~~~~~a~~~~ 449 (687)
. .. ............+....|++.++||++++++| |++ ...||.+++.++.+ .|++ +..++.....+
T Consensus 195 ~--~~-~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 195 V--AR-PLLAALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp T--HH-HHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred h--HH-HHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 0 00 00111111111223346677899999999996 754 46799999999987 6775 77777554333
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.85 E-value=5.9e-21 Score=220.71 Aligned_cols=228 Identities=13% Similarity=0.084 Sum_probs=156.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCc-eEEEEEcCCCChhH--HHHHHHHHHHHhhcCcEEEEEeccCCCCC
Q 041566 231 DYPMVLVQIPMCNEREVYGQSIAAVCIQDWPKER-MLVQILDDSDDLDV--QLLIKAEVLKWQQRGVHIIYRHRLIRSGY 307 (687)
Q Consensus 231 ~~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~-leViVvDD~s~d~t--~~~l~~~~~~~~~~~v~i~~~~r~~~~gg 307 (687)
..|+|+|+||+||+++.+.+||+|+.+|+|+.+. .||+||||+|+|.. .+..+ ..++ .+.++.++..+ +.|
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e-~~~~---~~~~I~vI~~~--N~G 251 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPA-AAAR---LGSRLSIHDQP--NLG 251 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHH-HHHH---HGGGEEEEECC--CCH
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHH-HHHh---cCCCEEEEECC--CCC
Confidence 4689999999999999999999999999984332 48999999998732 22222 2221 22345555443 556
Q ss_pred hHhHHHHHhccccc-CCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCC------hhH-------H
Q 041566 308 KAGNLNSAMGCDYV-KDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDEN------LLT-------R 373 (687)
Q Consensus 308 Ka~aLn~gl~~~~~-a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~------~~~-------r 373 (687)
.+++.|.|++.... .++|||+++|+|++++|++|++++..+..+|++++|++.....+.... +.. .
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~ 331 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTA 331 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccc
Confidence 99999999984311 167999999999999999999999999988899999887654433210 000 0
Q ss_pred hhhhhhh-------hhH--HHHHhhccccccccccccceEEEehhhhhhhCCCCCCC-ccchHHHHHHHHHcCCeEEEEc
Q 041566 374 LQNINLS-------FHF--EVEQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRT-TVEDMDIAVRAHLCGWKFVYVN 443 (687)
Q Consensus 374 ~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~-~~ED~~l~~rl~~~G~ri~~~~ 443 (687)
.....+. ... ........ ...+....|+++++|+++++++|||++.. ..||.|++.|+.++||++.++|
T Consensus 332 ~~~~~~~~~f~~~~l~~~~~~~~~~~~-~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 332 APHAEYDHDFAEYPLNDNNSRSKLLHR-RIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CTTCCSCEETTTSCSSCSSHHHHGGGB-CCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccc-ceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence 0000000 000 00111111 11223367899999999999999997532 3799999999999999999999
Q ss_pred ceEEeeccCcC------HHHHHHHHHHh
Q 041566 444 DVKCLCELPES------YEAYKKQQHRW 465 (687)
Q Consensus 444 ~a~~~~e~P~t------~~~~~~Qr~RW 465 (687)
++.+++....+ ++.|...|.|+
T Consensus 411 ~a~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 411 GAAIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp EEEEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred CEEEEEcCcCccccccHHHHHHHHHHHH
Confidence 99999865322 45555555543
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.77 E-value=4.1e-18 Score=185.07 Aligned_cols=196 Identities=13% Similarity=0.064 Sum_probs=140.1
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEe----ccCCC
Q 041566 232 YPMVLVQIPMCNEREVYGQSIAAVCI--QDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRH----RLIRS 305 (687)
Q Consensus 232 ~P~VsViIP~yNE~~~l~~tL~Sl~~--q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~----r~~~~ 305 (687)
.|+|||+||+|||++.+.++|+|+.+ ++||. ..||+||||+|+|.|.+++++ .+.++.... +...+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~-------~~~~v~~~~~~~i~~~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAAS-------HGAEVYSENELMSGYGDA 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHH-------TTCEEEEGGGTTGGGCSC
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHH-------hCchhcccceeEecCCcc
Confidence 57899999999999999999999987 46664 378999999999999998874 333433211 22346
Q ss_pred CChHhHHHHHhcccccCCccEEEEEcCCCC-CCHHHHHHHHHHHccCCCeEEEeeeeeeccCC--------CChhHHhhh
Q 041566 306 GYKAGNLNSAMGCDYVKDYEFVAIFDADFQ-PTPDFLKKTIPYFKGNDDLALVQTRWSFVNKD--------ENLLTRLQN 376 (687)
Q Consensus 306 ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~-~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~--------~~~~~r~~~ 376 (687)
.||+.|+|.|++ .+++|||+++|+|++ ++|++|.+++..+.++|++++|.|........ .+...++..
T Consensus 165 ~G~g~A~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~ 241 (387)
T 3f1y_A 165 HGKGDAMWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTA 241 (387)
T ss_dssp CSHHHHHHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTH
T ss_pred CCHHHHHHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhH
Confidence 679999999999 689999999999999 89999999999998778999999864322111 111111100
Q ss_pred hhhhhhHHHHHhhccccccccccccceEEEehhhhhhhCCCCCCCccchHHHHHHHH-HcCCe-EEEEcceE
Q 041566 377 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTTVEDMDIAVRAH-LCGWK-FVYVNDVK 446 (687)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~l~~rl~-~~G~r-i~~~~~a~ 446 (687)
.............+....|...++||++++++ +|+ ...+.|.++..++. +.|++ +..+|-..
T Consensus 242 ------~~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~-~gyg~e~ell~~~~~~~G~~~I~eVpi~~ 305 (387)
T 3f1y_A 242 ------KPLFNLFYPELAGFVQPLAGEFVADRELFCSI-PFL-TGYAVETGIMIDVLKKVGLGAMAQVDLGE 305 (387)
T ss_dssp ------HHHHHHHCGGGTTCSCTTCSCEEEEHHHHTTS-CEE-CSTTHHHHHHHHHHHHHCGGGEEEEEEEE
T ss_pred ------HHHHHHHhHhhccccccccccEEEEHHHHHhC-CCC-CCcchHHHHHHHHHHhcCCCeEEEEecce
Confidence 00111111111112223466789999999999 675 45788999999885 45987 98888665
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.77 E-value=2.8e-20 Score=218.90 Aligned_cols=199 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhH
Q 041566 232 YPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGN 311 (687)
Q Consensus 232 ~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~a 311 (687)
.|+|||+||+||+++.+++||+|+++|+||+ +||+||||||+|+|.+++++..+++ +.++.+...+. +.|.++|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~~~---~~~i~~i~~~~-n~G~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIKDY---DKNIRFIDLDE-NSGHAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHHhC---CCCEEEEECCC-CCCHHHH
Confidence 3789999999999999999999999999985 8899999999999999988765532 23455544343 4569999
Q ss_pred HHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHHHHhhcc
Q 041566 312 LNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNG 391 (687)
Q Consensus 312 Ln~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~~~~~~~ 391 (687)
+|.|++ .++||||+++|+|+.++|++|++++..+. ++++.+... .....+.............. .........
T Consensus 75 rN~gi~---~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 147 (729)
T 3l7i_A 75 RNIALE---EVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPI--HSFTTQRPQFVDLDRVRVEY-FNAKENINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH---hccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEee--EEeecCCCccccccceeeee-ecchhhHHH
Confidence 999999 78999999999999999999999999998 455433332 22222211111111111000 011111111
Q ss_pred ccccccccccceEEEehhhhhhhC-CCCCCC-ccchHHHHHHHHHcCCeEEEE-cceE
Q 041566 392 VFINFFGFNGTAGVWRIKALEECG-GWLDRT-TVEDMDIAVRAHLCGWKFVYV-NDVK 446 (687)
Q Consensus 392 ~~~~~~~~~G~~~~~Rr~aL~~iG-Gf~~~~-~~ED~~l~~rl~~~G~ri~~~-~~a~ 446 (687)
.. ....+++.++||++++++| +|++.. ..||.+++.++..+|+++.++ +.+.
T Consensus 148 ~~---~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~ 202 (729)
T 3l7i_A 148 FL---RKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPF 202 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred Hh---hccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEE
Confidence 11 1246778999999999999 898764 689999999999999999999 5554
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.70 E-value=6.5e-18 Score=176.15 Aligned_cols=178 Identities=15% Similarity=0.126 Sum_probs=127.2
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHH---cCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCC
Q 041566 231 DYPMVLVQIPMCNEREVYGQSIAAVC---IQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGY 307 (687)
Q Consensus 231 ~~P~VsViIP~yNE~~~l~~tL~Sl~---~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~gg 307 (687)
..|+||||||+||+++.++.+|+|+. +|.+++ +||+||||++++. -+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~----------------------------f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTI----------------------------FN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC----------------------------CC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCc----------------------------cc
Confidence 36799999999999999999999999 677774 8899999954421 13
Q ss_pred hHhHHHHHh----cccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhH
Q 041566 308 KAGNLNSAM----GCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHF 383 (687)
Q Consensus 308 Ka~aLn~gl----~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~ 383 (687)
++.++|.|+ + .+++|||+++|+|++++|+..... ...+|.. .. ..... ..+.
T Consensus 113 ~a~a~N~G~~~al~---~A~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~---~~~~~---~~~~--- 168 (287)
T 2fy7_A 113 RAKLLNVGFQEALK---DYDYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------IS---VAMDK---FGFS--- 168 (287)
T ss_dssp HHHHHHHHHHHHHH---HSCCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CC---CEEGG---GTTS---
T ss_pred hhhhhhhHHHHHHH---hCCCCEEEEECCCcccCCCcceEe---cCCCCce---------EE---Eeecc---cccC---
Confidence 778889888 6 689999999999999999852100 0011111 00 00000 0000
Q ss_pred HHHHhhccccccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEEEEcc-----eEE-------e
Q 041566 384 EVEQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFVYVND-----VKC-------L 448 (687)
Q Consensus 384 ~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~~~~~-----a~~-------~ 448 (687)
. ....+.|+++++||++++++|||++... .||.|++.|+.++|+++...+. ... .
T Consensus 169 -------~---~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 169 -------L---PYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp -------C---SSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred -------C---CcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 0 1123578999999999999999998755 4999999999999999884332 222 2
Q ss_pred eccCcCHHHHHHHHHHhhcccHHH
Q 041566 449 CELPESYEAYKKQQHRWHSGPMQL 472 (687)
Q Consensus 449 ~e~P~t~~~~~~Qr~RW~~G~~q~ 472 (687)
...|..++...+|+.||..+.++.
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~ 262 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNS 262 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGG
T ss_pred CCCHHHHHHHhhcccEEcCCCccc
Confidence 245778889999999999987754
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.69 E-value=1.3e-16 Score=163.24 Aligned_cols=183 Identities=9% Similarity=-0.044 Sum_probs=123.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChH
Q 041566 231 DYPMVLVQIPMCNEREVYGQSIAAVCIQD-WPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKA 309 (687)
Q Consensus 231 ~~P~VsViIP~yNE~~~l~~tL~Sl~~q~-yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa 309 (687)
..|.+|| ||+||+++.+++||+|+.+.- .+.. +||+||||+|+|. .|.+
T Consensus 14 ~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~----------------------------~g~a 63 (249)
T 2nxv_A 14 STLMFSV-CSLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQ----------------------------FHGF 63 (249)
T ss_dssp CCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS----------------------------CCTT
T ss_pred CcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc----------------------------ccHH
Confidence 4578997 467999999999999876422 2222 8999999998751 2367
Q ss_pred hHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHcc----CCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHH
Q 041566 310 GNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKG----NDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEV 385 (687)
Q Consensus 310 ~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~----~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~ 385 (687)
.|+|.|++ .+++||++++|+|+.++|++|++++..+++ +|++++++.........+... .............
T Consensus 64 ~a~N~Gi~---~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~~~~~~~~~ 139 (249)
T 2nxv_A 64 SWHKQMLP---RCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQALHISDVFGN 139 (249)
T ss_dssp THHHHHGG---GCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEEEEEETTEE
T ss_pred HHHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecccccCCcccc
Confidence 89999999 789999999999999999999999999986 499988765432222111100 0000000000000
Q ss_pred HHhhccccccccccccceEEEehhhhhhhCCCCCCC---ccchHHHHHHHHHcCCeEEEEcceEEeecc
Q 041566 386 EQQVNGVFINFFGFNGTAGVWRIKALEECGGWLDRT---TVEDMDIAVRAHLCGWKFVYVNDVKCLCEL 451 (687)
Q Consensus 386 ~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~---~~ED~~l~~rl~~~G~ri~~~~~a~~~~e~ 451 (687)
..........+..+.|+++++||++ .|||++.. ..||.|++.|+.++|+++.+.|.. +++..
T Consensus 140 ~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 140 DRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred ccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 0000011112223579999999999 67898632 358999999999999999999865 55543
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.52 E-value=6.6e-14 Score=151.87 Aligned_cols=197 Identities=13% Similarity=0.053 Sum_probs=125.9
Q ss_pred EEEeecCCchHHHHHHHHHHHc-CCCCCCceEEEEEcCCCChhHHHHHHHHHHHHh-hcCcEEEEEe-ccCC--CCChHh
Q 041566 236 LVQIPMCNEREVYGQSIAAVCI-QDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQ-QRGVHIIYRH-RLIR--SGYKAG 310 (687)
Q Consensus 236 sViIP~yNE~~~l~~tL~Sl~~-q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~-~~~v~i~~~~-r~~~--~ggKa~ 310 (687)
.|+||++|| .+..+++++.. +.+|. +||+||||||+|.|.+++++..++.+ ..+++++... +..+ +.||+.
T Consensus 3 lVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~ 78 (397)
T 2bo4_A 3 LVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGD 78 (397)
T ss_dssp EEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHH
T ss_pred EEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHH
Confidence 355665544 46777777642 33453 68999999999999999998777665 5567765432 2112 457999
Q ss_pred HHHHHhcccc-cCCccEEEEEcCCCC-CCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhh-hhhhhhhHHHHH
Q 041566 311 NLNSAMGCDY-VKDYEFVAIFDADFQ-PTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQ-NINLSFHFEVEQ 387 (687)
Q Consensus 311 aLn~gl~~~~-~a~~d~V~~lDaD~~-~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~-~~~~~~~~~~~~ 387 (687)
|++.|++... .+++|+|+++|||.+ .+|+++.+++..+.+ ++++|.|... ....++...+.. ..-....+...+
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~-r~~~~~~~~~~~~~~ll~~~~~~~~ 155 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWPHTE 155 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEec-cccCCcHHHHHHHHHHHHHHHHHhh
Confidence 9999993221 689999999999997 799999999999864 4677777421 111222222211 100000000000
Q ss_pred hhccccccccccccceEEEehhhhhhhCCC----CCCCccchHHHHHHHHHcCCeEEEEcc
Q 041566 388 QVNGVFINFFGFNGTAGVWRIKALEECGGW----LDRTTVEDMDIAVRAHLCGWKFVYVND 444 (687)
Q Consensus 388 ~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf----~~~~~~ED~~l~~rl~~~G~ri~~~~~ 444 (687)
.. .+.-..+...++||++++++... .....+.|.++..++.++|+++..+|-
T Consensus 156 ~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpi 211 (397)
T 2bo4_A 156 LS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYI 211 (397)
T ss_dssp GG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred cc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEEC
Confidence 00 11111234458999999987311 233456799999999999999998874
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.00 E-value=1.2e-09 Score=113.79 Aligned_cols=104 Identities=16% Similarity=0.051 Sum_probs=75.2
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHH---HHHHHHHHHHhhcCcEEEEEeccC-----
Q 041566 232 YPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQ---LLIKAEVLKWQQRGVHIIYRHRLI----- 303 (687)
Q Consensus 232 ~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~---~~l~~~~~~~~~~~v~i~~~~r~~----- 303 (687)
..+++||||||||+.. +|+++++|.+.+ ++||+|||||+|.+. +++++.++. .+-++..++..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~---~~~ri~viHQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHL---TERPALIFHQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHH---TTCCEEEEETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhh---cccceEEEeccChHHHH
Confidence 4579999999999964 699999998664 889999999999995 455554431 233333334211
Q ss_pred ----------------CCCChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHH
Q 041566 304 ----------------RSGYKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKK 343 (687)
Q Consensus 304 ----------------~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~ 343 (687)
.+.||+.+|-.|+..+...+++||.|+|||...+.+..+.
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Ey 179 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEY 179 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHH
Confidence 1346999999999843234899999999999997655443
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.80 E-value=1.1e-08 Score=109.41 Aligned_cols=106 Identities=21% Similarity=0.218 Sum_probs=72.3
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhH------HHHHHHHHHHHhhcCcEEEEEec-----
Q 041566 233 PMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDV------QLLIKAEVLKWQQRGVHIIYRHR----- 301 (687)
Q Consensus 233 P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t------~~~l~~~~~~~~~~~v~i~~~~r----- 301 (687)
.+++||||+|||++.+ |..++++- |. ..+|++|||||+|++ .+.+++.+... +.+..++....
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i-~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAI-PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHS-CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcC-CC-CcEEEEEECcCcccccchhhHHHHHHHHhhcc-ccceEEEecCCcchhH
Confidence 3699999999999653 44444322 22 267999999996665 45555544321 24444443222
Q ss_pred ---------------cCCCCChHhHHHHHhcccccC---CccEEEEEcCCCCCCHHHHHHHHHHHc
Q 041566 302 ---------------LIRSGYKAGNLNSAMGCDYVK---DYEFVAIFDADFQPTPDFLKKTIPYFK 349 (687)
Q Consensus 302 ---------------~~~~ggKa~aLn~gl~~~~~a---~~d~V~~lDaD~~~~pd~L~~lv~~f~ 349 (687)
..++ ||..|+..|+. .+ ++|+|+++|||. ..|..+.+.+..+.
T Consensus 125 ~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~---~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRS-GKGEGMLVGLL---LAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCC-SHHHHHHHHHH---HHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HhhhccccccccccccccC-ChHHHHHHHHH---HHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 1124 79999999998 56 899999999999 67888877777654
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.80 E-value=1e-08 Score=108.75 Aligned_cols=185 Identities=13% Similarity=0.159 Sum_probs=114.1
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEe---------ccC
Q 041566 233 PMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRH---------RLI 303 (687)
Q Consensus 233 P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~---------r~~ 303 (687)
+.+.|+|++||.++ ++++|+|+++|..+.+..+|+|.|||+.+++.+++++.. .++.+.. ++.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-------~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-------SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-------GGSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-------CceEEEEcCCccccccchh
Confidence 45789999999999 999999999998555567899999999999988877421 1222221 112
Q ss_pred CCCCh-----H----hHHHHHhcccccCCccEEEEEcCCCCCCHHHH---HHHHHHHccCCCeEEEeeeeeeccCCCChh
Q 041566 304 RSGYK-----A----GNLNSAMGCDYVKDYEFVAIFDADFQPTPDFL---KKTIPYFKGNDDLALVQTRWSFVNKDENLL 371 (687)
Q Consensus 304 ~~ggK-----a----~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L---~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~ 371 (687)
+.|.+ + .++|.+++ ..++|+++++|+|+++.|||+ .++++.+++|+.+..+++- |.....
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~---~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~----n~~g~~- 145 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFH---NFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW----NDNGKE- 145 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHT---TSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC----CTTCBG-
T ss_pred hcCcccchhHhHHHHHHHHHHHH---hccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc----cCcccc-
Confidence 22211 1 35666666 568999999999999999998 5555555778999888763 111110
Q ss_pred HHhhhhhhhhhHHHHHhhccccccccccccceEEEehhhhhhhC-CCCCCCccchHHHHHH--HHHcCCeEEEEcceE-E
Q 041566 372 TRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEECG-GWLDRTTVEDMDIAVR--AHLCGWKFVYVNDVK-C 447 (687)
Q Consensus 372 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~aL~~iG-Gf~~~~~~ED~~l~~r--l~~~G~ri~~~~~a~-~ 447 (687)
....... .......-.++|-+.+..|++.+++. .|+. ++.+.++| ..++|. ....|++- +
T Consensus 146 ~~~~~~~-----------~~~lyrs~~f~~wGWa~wr~~W~e~~~~wp~----~~Wd~w~r~~~~~~~r-~ci~P~vsrv 209 (343)
T 1fo8_A 146 QMVDSSK-----------PELLYRTDFFPGLGWLLLAELWAELEPKWPK----AFWDDWMRRPEQRKGR-ACVRPEISRT 209 (343)
T ss_dssp GGSCTTC-----------TTCEEEESSCCCSSEEEEHHHHHHHGGGCCS----SCHHHHHTSHHHHTTC-EEEEESSBSE
T ss_pred ccccccC-----------cceEEeecCCCchhhhhcHHHHHHHhhhcch----hHHHHHHHHHHHhCCC-EEEEecccee
Confidence 0000000 00000111145677888899988763 3433 24554443 345554 44455543 4
Q ss_pred ee
Q 041566 448 LC 449 (687)
Q Consensus 448 ~~ 449 (687)
.+
T Consensus 210 ~n 211 (343)
T 1fo8_A 210 MT 211 (343)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=96.98 E-value=0.0035 Score=63.45 Aligned_cols=178 Identities=15% Similarity=0.193 Sum_probs=111.4
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCC
Q 041566 232 YPMVLVQIPMCNEREVYGQSIAAVC----IQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGY 307 (687)
Q Consensus 232 ~P~VsViIP~yNE~~~l~~tL~Sl~----~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~gg 307 (687)
.-+|.||||-+|.++.+...+.-+. +|.- .+.|+|++...+. .=.
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~~----------------------------~FN 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDRF----------------------------RFN 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSSS----------------------------CCC
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCCC----------------------------ccc
Confidence 3489999999999977776665543 3432 3667777753211 112
Q ss_pred hHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHHHH
Q 041566 308 KAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQ 387 (687)
Q Consensus 308 Ka~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~~~ 387 (687)
++..+|.|+..+ ..+.|++++-|.|.+|..|...- . -|+. ..+ .....+ ...+.+
T Consensus 99 Ra~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~Y-----~-c~~~---~~P-~Hls~~--------~~~~~~------ 153 (287)
T 3lw6_A 99 RASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLLY-----E-YPSS---LGP-LHIAGP--------KLHPKY------ 153 (287)
T ss_dssp HHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSCC-----C-CCCT---TCC-EESSCT--------TTCSSC------
T ss_pred hhheecccHHHH-hccCCEEEEecccccccCCCccc-----c-CCCC---CCc-eEEeec--------cccCCC------
Confidence 777888888743 34689999999999886431110 0 0000 001 111110 000100
Q ss_pred hhccccccccccccceEEEehhhhhhhCCCCCCCc---cchHHHHHHHHHcCCeEEEEcce------EEee---------
Q 041566 388 QVNGVFINFFGFNGTAGVWRIKALEECGGWLDRTT---VEDMDIAVRAHLCGWKFVYVNDV------KCLC--------- 449 (687)
Q Consensus 388 ~~~~~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~---~ED~~l~~rl~~~G~ri~~~~~a------~~~~--------- 449 (687)
....+.|...+++++.+.++|||++... .||.|+..|+...|.++.-.+.. ...+
T Consensus 154 -------~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~r 226 (287)
T 3lw6_A 154 -------HYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR 226 (287)
T ss_dssp -------CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCC
T ss_pred -------CcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCC
Confidence 1123678889999999999999987665 69999999999999988765432 1221
Q ss_pred ccCcCHHHHHHHHHHhhcccHHH
Q 041566 450 ELPESYEAYKKQQHRWHSGPMQL 472 (687)
Q Consensus 450 e~P~t~~~~~~Qr~RW~~G~~q~ 472 (687)
+.|..+.....+++||..+.++.
T Consensus 227 d~~k~~~~~~~~~~r~~~dGLns 249 (287)
T 3lw6_A 227 DTQKCFNQKEMTRKRDHKTGLDN 249 (287)
T ss_dssp CCCCCTTHHHHHTSCCSSCSGGG
T ss_pred cccchhhhhhhhcEEccCCCCee
Confidence 22334556677888888776654
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=94.45 E-value=0.084 Score=50.44 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=62.3
Q ss_pred cCCccEEEEEcCC---CCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHHHHhhcccccccc
Q 041566 321 VKDYEFVAIFDAD---FQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFF 397 (687)
Q Consensus 321 ~a~~d~V~~lDaD---~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 397 (687)
..++|+++++||| ...+|+.+.+++.. +.++|.|.......+. .+...+ .+. ....+ ..+.
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~~-----g~DVV~GsYp~K~~~~--~s~~a~-~y~------~~i~~--~~V~ 114 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFNE-----GYDVVCGYYYLKTLRG--YSVYRK-DWE------KEIFD--GEVN 114 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHHH-----TCSEEEEECBCTTSSS--BSEESS-SBC------SSCCC--EECS
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHhC-----CCCEEEEEeeccCCCc--cchHHH-HHH------HhccC--ceee
Confidence 4678999999999 99999999999822 3457777543322111 000000 000 00001 1222
Q ss_pred ccccceEEEehhhhhhhC--CC-------CCCCccchHHHHHHHHHcCCeE
Q 041566 398 GFNGTAGVWRIKALEECG--GW-------LDRTTVEDMDIAVRAHLCGWKF 439 (687)
Q Consensus 398 ~~~G~~~~~Rr~aL~~iG--Gf-------~~~~~~ED~~l~~rl~~~G~ri 439 (687)
..++...++||++++.+- .| .....+||..++..+..+|+-+
T Consensus 115 d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 115 GCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred eccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 245556889999999872 23 1235689999999999888776
No 21
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=93.06 E-value=0.59 Score=47.07 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=64.7
Q ss_pred CCCCCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC--ChhHHHHHHHHHHHHhhcCcEEEEEeccC
Q 041566 229 LEDYPMVLVQIPMCNER---EVYGQSIAAVCIQDWPKERMLVQILDDSD--DLDVQLLIKAEVLKWQQRGVHIIYRHRLI 303 (687)
Q Consensus 229 ~~~~P~VsViIP~yNE~---~~l~~tL~Sl~~q~yP~~~leViVvDD~s--~d~t~~~l~~~~~~~~~~~v~i~~~~r~~ 303 (687)
....|.|-||-|+|... ..+.+.-..+..- | .+.-|||+|+. ++.+.++++ ..|+...+..-+.
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~V--p--~L~WIVVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~ 85 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTLSLV--P--RLHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLT 85 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHHTTS--S--SEEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCC
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHHhcC--C--ceEEEEEcCCCCCCHHHHHHHH-------HcCCceEEeccCC
Confidence 45689999999999987 2333333333222 4 48899999974 677777776 4677766664432
Q ss_pred CCCCh-------------HhHHHHHhcccc---------c-C----CccEEEEEcCCCCCCHHHHHH
Q 041566 304 RSGYK-------------AGNLNSAMGCDY---------V-K----DYEFVAIFDADFQPTPDFLKK 343 (687)
Q Consensus 304 ~~ggK-------------a~aLn~gl~~~~---------~-a----~~d~V~~lDaD~~~~pd~L~~ 343 (687)
....| ....|.|+++.. . . ..-+|.|.|+|...+-+..++
T Consensus 86 p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde 152 (281)
T 3cu0_A 86 PKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE 152 (281)
T ss_dssp C-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred CccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence 22211 356788886422 1 1 246899999999999877776
No 22
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=93.06 E-value=0.36 Score=48.09 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=66.6
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC--ChhHHHHHHHHHHHHhhcCcEEEEEeccCC--
Q 041566 232 YPMVLVQIPMCNER---EVYGQSIAAVCIQDWPKERMLVQILDDSD--DLDVQLLIKAEVLKWQQRGVHIIYRHRLIR-- 304 (687)
Q Consensus 232 ~P~VsViIP~yNE~---~~l~~tL~Sl~~q~yP~~~leViVvDD~s--~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~-- 304 (687)
+|.+-||-|+|... ..+.+.-..+. + -| .++-|||+|+. ++.+.++++ ..|+...+..-+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp--~L~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLL-H-VP--NLHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHT-T-SS--SEEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhc-c-CC--ceEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68999999999987 33334434442 2 25 48899999965 677777776 46777666643311
Q ss_pred ---------CC--ChHhHHHHHhcccc------cCCccEEEEEcCCCCCCHHHHHHH
Q 041566 305 ---------SG--YKAGNLNSAMGCDY------VKDYEFVAIFDADFQPTPDFLKKT 344 (687)
Q Consensus 305 ---------~g--gKa~aLn~gl~~~~------~a~~d~V~~lDaD~~~~pd~L~~l 344 (687)
.. .-....|.|+++.. ....-+|.|.|+|...+-+..+++
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 00 01346788887521 123568999999999999777763
No 23
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=91.91 E-value=0.78 Score=45.49 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=64.1
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCCC--hhHHHHHHHHHHHHhhcCcEEEEEeccCCCC
Q 041566 232 YPMVLVQIPMCNER---EVYGQSIAAVCIQDWPKERMLVQILDDSDD--LDVQLLIKAEVLKWQQRGVHIIYRHRLIRSG 306 (687)
Q Consensus 232 ~P~VsViIP~yNE~---~~l~~tL~Sl~~q~yP~~~leViVvDD~s~--d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~g 306 (687)
+|.+-||-|+|... ..+.+.-..+. + -|+ ++-|||+|+.. +.+.++++ ..|+...+..-+....
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp~--l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-Q-VAQ--LHWILVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-T-STT--EEEEEEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-c-CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68899999999987 33333333333 2 244 88899999763 34555555 5777766664332111
Q ss_pred Ch-------HhHHHHHhccc---c---cCCccEEEEEcCCCCCCHHHHHH
Q 041566 307 YK-------AGNLNSAMGCD---Y---VKDYEFVAIFDADFQPTPDFLKK 343 (687)
Q Consensus 307 gK-------a~aLn~gl~~~---~---~a~~d~V~~lDaD~~~~pd~L~~ 343 (687)
.| ....|.|+++. . ....-+|.|.|+|...+-+..++
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~e 120 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQE 120 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHH
Confidence 11 35678888642 1 12346899999999998877766
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=88.78 E-value=3 Score=41.72 Aligned_cols=182 Identities=15% Similarity=0.130 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCcc
Q 041566 246 EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDYE 325 (687)
Q Consensus 246 ~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~d 325 (687)
..+..+++.+.+.. -++ |+|+-| ++...+.++ +.++++++.. +...+|..+ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~--i~~--VvVvt~--~~~i~~~~~-------~~g~~v~~~~-~~~~~Gt~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEE--VVIATD--DKRIRQVAE-------DFGAVVCMTS-SDHQSGTER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECC-TTCCSHHHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEeC-CCCCCcHHH-HHHHHHHhCcCCCC
Confidence 47888888888754 234 444443 344443333 3577776543 233344544 55666531113679
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHccCCCe--EEEeeeee----eccCCC-ChhH----Hhhhhhhh-hhHHHHHhhc--
Q 041566 326 FVAIFDADF-QPTPDFLKKTIPYFKGNDDL--ALVQTRWS----FVNKDE-NLLT----RLQNINLS-FHFEVEQQVN-- 390 (687)
Q Consensus 326 ~V~~lDaD~-~~~pd~L~~lv~~f~~~p~v--g~Vqg~~~----~~n~~~-~~~~----r~~~~~~~-~~~~~~~~~~-- 390 (687)
.++++++|. ..+++.+++++..+.++++. +.+..+.. +.|++. .... +...++-. ..+.......
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999999 66899999999999765543 33333211 111110 0000 00000000 0000000000
Q ss_pred cc-cccccccccceEEEehhhhhhhCCCCCCCccchHH--HHHHHHHcCCeEEEEc
Q 041566 391 GV-FINFFGFNGTAGVWRIKALEECGGWLDRTTVEDMD--IAVRAHLCGWKFVYVN 443 (687)
Q Consensus 391 ~~-~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~--l~~rl~~~G~ri~~~~ 443 (687)
.. ......-+....+||+++++....+++. .-|..+ -.+|+..+|+++....
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s-~lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDAC-PAEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCCEEEE
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCC-cccchhhhHHHHHHHCCCeEEEEE
Confidence 00 0001113455689999999997656443 233322 1357889999987764
No 25
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=85.32 E-value=2.8 Score=41.89 Aligned_cols=181 Identities=10% Similarity=0.111 Sum_probs=92.5
Q ss_pred hHHHHHHH-HHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 245 REVYGQSI-AAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 245 ~~~l~~tL-~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
...+..++ +++.+.. -++ |+|+-| ++...+.++ ..++++++. ++...+|. +.+..+++.....+
T Consensus 26 kPli~~~i~~~~~~~~--~~~--vvVvt~--~~~i~~~~~-------~~g~~v~~~-~~~~~~Gt-~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEG--FDD--LCVATD--DERIAEICR-------AEGVDVVLT-SADHPSGT-DRLSEVARIKGWDA 90 (253)
T ss_dssp EEHHHHHHHHHHTCTT--CCE--EEEEES--CHHHHHHHH-------TTTCCEEEC-CTTCCCHH-HHHHHHHHHHTCCT
T ss_pred eEhHHHHHHHHHHhcC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEe-CCCCCChH-HHHHHHHHhcCcCC
Confidence 35788899 8887643 334 444443 244433332 456776653 23233333 35566665311225
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHccCCC--eEEEeeee----eeccCCC-ChhHHhhhhhhhhhHHH-----HHhhc
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKGNDD--LALVQTRW----SFVNKDE-NLLTRLQNINLSFHFEV-----EQQVN 390 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~~p~--vg~Vqg~~----~~~n~~~-~~~~r~~~~~~~~~~~~-----~~~~~ 390 (687)
.|+++++++|. ..+++.+.+++..+.++++ ++.+..+. ...|++. ..... .+ .....|.. .+...
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d-~~-g~~l~fsr~~ip~~r~~~ 168 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMS-KQ-NEALYFSRATIPYDRDGA 168 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEEC-TT-SBEEEEESSCCSCCTTTS
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEEC-CC-CeEEEecCCCCCCCCCcc
Confidence 69999999999 6799999999999976554 33333331 1122211 00000 00 00000000 00000
Q ss_pred cc---c-ccccccccceEEEehhhhhhhCCCCCCCccchHH--HHHHHHHcCCeEEEEc
Q 041566 391 GV---F-INFFGFNGTAGVWRIKALEECGGWLDRTTVEDMD--IAVRAHLCGWKFVYVN 443 (687)
Q Consensus 391 ~~---~-~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~--l~~rl~~~G~ri~~~~ 443 (687)
.. . ....-.+....+||+++|++...++.. .-|-.+ -.+|+..+|+++....
T Consensus 169 ~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~-~le~~e~le~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 169 KRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMG-KLEKLESLEQLRVLENGHRIAIAV 226 (253)
T ss_dssp SSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCC-HHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred cccccccccceeEEEEEEEeCHHHHHHHHhCCCC-cccchhHHHHHHHHHCCCceEEEE
Confidence 00 0 001113556789999999998665432 222222 2346678999887654
No 26
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=82.20 E-value=5.4 Score=37.30 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.. -++ |+|+-+...+.. ++.. .+.++++++. +....|-.+++..|++.. ..+
T Consensus 30 g~pll~~~l~~l~~~~--~~~--i~vv~~~~~~~~----~~~~---~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (197)
T 2wee_A 30 DTTVLGATLDVARQAG--FDQ--LILTLGGAASAV----RAAM---ALDGTDVVVV--EDVERGCAASLRVALARV-HPR 95 (197)
T ss_dssp TEEHHHHHHHHHHHTT--CSE--EEEEECTTHHHH----HHHS---CCTTSEEEEC--C----CCHHHHHHHHTTS-CTT
T ss_pred CccHHHHHHHHHHhcC--CCc--EEEEeCCCHHHH----HHHh---ccCCCEEEEC--CCcccCHHHHHHHHHHHh-ccc
Confidence 3468888999887754 223 444443322222 2211 1346666542 222234778888888732 125
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
.+.++++++|. .++++.+++++.. ..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~-~~ 122 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV-GP 122 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH-GG
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh-cC
Confidence 68999999999 5689999999988 53
No 27
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=82.14 E-value=8.8 Score=38.42 Aligned_cols=177 Identities=10% Similarity=0.072 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCcc
Q 041566 246 EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDYE 325 (687)
Q Consensus 246 ~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~d 325 (687)
..+..+++.+.+.. -++ |+|+-| ++...+.++ ..++++++.. +...+|..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~--i~~--IvV~t~--~~~i~~~~~-------~~g~~v~~~~-~~~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESG--AER--IIVATD--HEDVARAVE-------AAGGEVCMTR-ADHQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECC-TTCCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCEEEEec-CCCCCCHHH-HHHHHHHhccCCCC
Confidence 47888999888764 234 444443 344433332 3567766542 333444544 55555421123679
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHccC-CCeEEEeeeee------------e-ccCCCChhHHhhhhhhh-hhHHHHHh-
Q 041566 326 FVAIFDADF-QPTPDFLKKTIPYFKGN-DDLALVQTRWS------------F-VNKDENLLTRLQNINLS-FHFEVEQQ- 388 (687)
Q Consensus 326 ~V~~lDaD~-~~~pd~L~~lv~~f~~~-p~vg~Vqg~~~------------~-~n~~~~~~~r~~~~~~~-~~~~~~~~- 388 (687)
+++++++|. ..+++.+++++..+.+. .++..+..+.. . .+.++... .++-. ..+.....
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l----~fsr~~ip~~r~~~~ 184 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYAL----YFSRATIPWDRDRFA 184 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEE----EEESSCCSCCHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEE----EEecCCCCCCCcccc
Confidence 999999999 66899999999998742 23344443321 0 11111100 00000 00000000
Q ss_pred hcc-ccccccccccceEEEehhhhhhhCCCCCCCccchHH--HHHHHHHcCCeEEEE
Q 041566 389 VNG-VFINFFGFNGTAGVWRIKALEECGGWLDRTTVEDMD--IAVRAHLCGWKFVYV 442 (687)
Q Consensus 389 ~~~-~~~~~~~~~G~~~~~Rr~aL~~iGGf~~~~~~ED~~--l~~rl~~~G~ri~~~ 442 (687)
... ........+....+||++++++.-.++.. ..|..+ -.+|+..+|+++...
T Consensus 185 ~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~-~lE~~e~leqlr~le~G~~I~~~ 240 (264)
T 3k8d_A 185 EGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPS-PLEHIEMLEQLRVLWYGEKIHVA 240 (264)
T ss_dssp HCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCEEEE
T ss_pred ccccccCCcceEEEEEEEECHHHHHHHHhCCCC-hhhhHHHHHHHHHHHCCCceEEE
Confidence 000 00001113556799999999987555432 233222 125778999998875
No 28
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=81.30 E-value=6.3 Score=36.83 Aligned_cols=90 Identities=13% Similarity=0.032 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.. -++ |+|+-+...+...+.+ ...++++++. +....|-.+++..|++.. ..+
T Consensus 30 g~pli~~~l~~l~~~~--~~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (199)
T 2waw_A 30 DTTLLGATLAMARRCP--FDQ--LIVTLGGAADEVLEKV-------ELDGLDIVLV--DDAGLGCSSSLKSALTWV-DPT 95 (199)
T ss_dssp TEEHHHHHHHHHHTSS--CSE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--CCCCTTCCCHHHHHHHTS-CTT
T ss_pred ccCHHHHHHHHHHhCC--CCc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHhh-hcc
Confidence 3468889999988764 223 4444433222222211 1346666542 222234667888888732 125
Q ss_pred ccEEEEEcCCCC-CCHHHHHHHHHH
Q 041566 324 YEFVAIFDADFQ-PTPDFLKKTIPY 347 (687)
Q Consensus 324 ~d~V~~lDaD~~-~~pd~L~~lv~~ 347 (687)
.|.++++++|.- ++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh
Confidence 689999999995 589999999987
No 29
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=80.30 E-value=8.1 Score=39.34 Aligned_cols=115 Identities=8% Similarity=0.008 Sum_probs=72.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHH-HHHHHHHHHhhcCcEEEEEeccCCCCChHh
Q 041566 232 YPMVLVQIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQL-LIKAEVLKWQQRGVHIIYRHRLIRSGYKAG 310 (687)
Q Consensus 232 ~P~VsViIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~-~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~ 310 (687)
....+|+|-+|+..+.+.+.|..+.+..+- -+|+||=++..+...+ ... ......+.+.++....+
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v---~~IvVvWn~~~~~pp~~~~~----~~~~~~vpv~v~~~~~n------ 93 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSL---HKVIVVWNNVGEKGPEELWN----SLGPHPIPVIFKPQTAN------ 93 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTE---EEEEEEECCTTCCCTHHHHH----HTCCCSSCEEEEECSSC------
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCC---CeEEEEeCCCCCCCChhhcc----ccCCCCccEEEEeCCCC------
Confidence 347999999999989999998887665432 2455555554222211 111 11122455655432221
Q ss_pred HHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeee
Q 041566 311 NLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTR 360 (687)
Q Consensus 311 aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~ 360 (687)
.||.=+.-...-+.|-|+.+|+|..++.+.|+.....-+++|+ -+|+..
T Consensus 94 sLnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf~ 142 (293)
T 1omz_A 94 KMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGFV 142 (293)
T ss_dssp CGGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEESC
T ss_pred chhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecCc
Confidence 2333333222457899999999999999999999998888887 345443
No 30
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=79.33 E-value=12 Score=36.94 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCcc
Q 041566 246 EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDYE 325 (687)
Q Consensus 246 ~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~d 325 (687)
..+..+++++.+.. -+++ +|+-| ++...+.++ +.++++++.. +....|.++ +..+++.....+.|
T Consensus 28 Pli~~~l~~l~~~~--~~~i--vVv~~--~~~i~~~~~-------~~g~~v~~~~-~~~~~Gt~~-~~~~~~~l~~~~~d 92 (252)
T 3oam_A 28 PMIQWVYEQAMQAG--ADRV--IIATD--DERVEQAVQ-------AFGGVVCMTS-PNHQSGTER-LAEVVAKMAIPADH 92 (252)
T ss_dssp EHHHHHHHHHHHTT--CSEE--EEEES--CHHHHHHHH-------HTTCEEEECC-TTCCSHHHH-HHHHHHHTTCCTTS
T ss_pred EHHHHHHHHHHhCC--CCeE--EEECC--HHHHHHHHH-------HcCCEEEEcC-CCCCCcHHH-HHHHHHhcCcCCCC
Confidence 47888999888765 2343 44433 344443332 3577776643 323344555 34444421113578
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHccC-CCeEEEee
Q 041566 326 FVAIFDADF-QPTPDFLKKTIPYFKGN-DDLALVQT 359 (687)
Q Consensus 326 ~V~~lDaD~-~~~pd~L~~lv~~f~~~-p~vg~Vqg 359 (687)
.++++++|. .++++.+++++..+.++ .++..+..
T Consensus 93 ~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 128 (252)
T 3oam_A 93 IVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAV 128 (252)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEE
T ss_pred EEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEee
Confidence 999999999 67899999999988743 34444443
No 31
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=77.74 E-value=17 Score=34.93 Aligned_cols=91 Identities=10% Similarity=0.076 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++++.+. . +++ +|+-+. +...+.++ .. +++++.. +...+|.++.+ .+++ ..+
T Consensus 26 g~pli~~~l~~~~~~--~-~~i--~v~~~~--~~i~~~~~-------~~-~~~~~~~-~~~~~g~~~~~-~~~~---~~~ 85 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT--G-ERV--ILATDS--ERVKEVVE-------DL-CEVFLTP-SDLPSGSDRVL-YVVR---DLD 85 (234)
T ss_dssp TEEHHHHHHHHHHTT--T-SCE--EEEESC--HHHHHHHT-------TT-SEEEECC-TTCCSHHHHHH-HHHT---TCC
T ss_pred CEEHHHHHHHHHHHh--C-CEE--EEECCh--HHHHHHHH-------hc-eEEEECC-cccccchHHHH-HHHH---hCC
Confidence 346888899988776 2 233 334332 33322221 22 5554332 22345566665 4555 335
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHccCCCe
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKGNDDL 354 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~~p~v 354 (687)
.|+++++++|. ..+++.+++++..+.+++++
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~ 117 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGERV 117 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSE
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCe
Confidence 78999999999 88999999999988654443
No 32
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=74.02 E-value=32 Score=33.01 Aligned_cols=93 Identities=15% Similarity=0.108 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEecc--CCCCChHhHHHHHhcccccC
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRL--IRSGYKAGNLNSAMGCDYVK 322 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~--~~~ggKa~aLn~gl~~~~~a 322 (687)
...++.+++.+.+...- ++ |+|+-| ++...+.++ ..+++++..... ....+-.+++..+++. ..
T Consensus 28 kpli~~~i~~~~~~~~~-~~--ivv~~~--~~~i~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~v~~al~~--~~ 93 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVAK-------QFGAQVHRRSSETSKDSSTSLDAIVEFLNY--HN 93 (229)
T ss_dssp EEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHHH-------HTTCEEEECCGGGSSTTCCHHHHHHHHHTT--CT
T ss_pred EEHHHHHHHHHHhCCCc-CE--EEEECC--hHHHHHHHH-------HcCCEEEeChhhhcCCCCcHHHHHHHHHHh--cC
Confidence 35788888888775421 23 444443 343333332 356776432211 1222234677788773 23
Q ss_pred CccEEEEEcCCC-CCCHHHHHHHHHHHccC
Q 041566 323 DYEFVAIFDADF-QPTPDFLKKTIPYFKGN 351 (687)
Q Consensus 323 ~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~ 351 (687)
+.|.++++++|. ..+++.+++++..+..+
T Consensus 94 ~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 94 EVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp TCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 678999999999 55899999999988643
No 33
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=67.81 E-value=28 Score=38.01 Aligned_cols=113 Identities=11% Similarity=0.024 Sum_probs=67.8
Q ss_pred EeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhc
Q 041566 238 QIPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMG 317 (687)
Q Consensus 238 iIP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~ 317 (687)
++|..|.+ .|+..|+++.+.. .++ |+|+-....+...+.+.+..+ ..+.++.|...+... |=++|+..++.
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g--~~~--i~vv~~~~~~~i~~~~~~~~~---~~~~~i~~~~q~~~l-GTa~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLA--PQR--LIVVLGHDHQRIAPLVGELAD---TLGRTIDVALQDRPL-GTGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHC--CSE--EEEEECTTHHHHHHHHHHHHH---HHTSCCEEEECSSCC-CHHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCC--CCE--EEEEeCCCHHHHHHHHHHHHH---hcCCcEEEEEcCCCC-CcHHHHHHHHH
Confidence 46777876 7788888887765 223 444444444444444443222 345556665544444 48999998887
Q ss_pred ccccCCccEEEEEcCCC-CCCHHHHHHHHHHHccC-CCeEEEee
Q 041566 318 CDYVKDYEFVAIFDADF-QPTPDFLKKTIPYFKGN-DDLALVQT 359 (687)
Q Consensus 318 ~~~~a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~-p~vg~Vqg 359 (687)
.......+.++++.+|+ ....+.+.+++.....+ ..+.++..
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~ 148 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTT 148 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeee
Confidence 42122234566666666 66889999998877643 34444443
No 34
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=67.52 E-value=21 Score=34.12 Aligned_cols=86 Identities=8% Similarity=0.016 Sum_probs=55.7
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccC
Q 041566 243 NEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVK 322 (687)
Q Consensus 243 NE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a 322 (687)
+....++.+++.+... +|+|+-+. .+. .+...+ ..++.++. ......|-.+++..|++. .
T Consensus 24 ~G~pli~~~~~~l~~~-------~vvvv~~~-~~~----~~~~~~---~~~~~~v~--d~~~~~G~~~si~~gl~~---~ 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-------QTVFVCRD-EKQ----AEKLSS---RYEAEFIW--DLHKGVGSIAGIHAALRH---F 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-------EEEEECSS-HHH----HHHHHT---TSCSCEEC--CTTCCCSHHHHHHHHHHH---H
T ss_pred CCeeHHHHHHHHhcCC-------CEEEEECC-HHH----HHHHHH---hcCCeEEe--cCCCCCChHHHHHHHHHH---c
Confidence 4556888999988764 35555532 121 221111 24666542 222223577888899884 3
Q ss_pred CccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 323 DYEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 323 ~~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
.|++ ++++|. .++++.+++++..+..
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 7899 999999 5699999999998873
No 35
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=67.49 E-value=35 Score=33.48 Aligned_cols=92 Identities=13% Similarity=0.114 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++++.+... ++ |+|+-+. +...+.++ ..++.+++.. +...+|.+ .+..+++.....+
T Consensus 26 gkpli~~~l~~l~~~~~--~~--ivvv~~~--~~i~~~~~-------~~~~~~~~~~-~~~~~g~~-~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SR--VIIATDN--ENVADVAK-------SFGAEVCMTS-VNHNSGTE-RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEESC--HHHHHHHH-------HTTCEEEECC-CSSCCHHH-HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ce--EEEECCc--HHHHHHHH-------hcCCEEEECC-ccccCChH-HHHHHHHHhccCC
Confidence 34688899999887653 34 4444432 33333322 3466664321 12233343 3333333211235
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
.|+++++++|. ..+++.+++++..+..
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 78999999999 5689999999988764
No 36
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=66.83 E-value=48 Score=31.84 Aligned_cols=91 Identities=9% Similarity=0.013 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.... ++ |+|+-+. +...+.++ +.++++++.. +...+|-++.. .+++. .+
T Consensus 26 g~pli~~~i~~~~~~~~~-~~--ivvv~~~--~~i~~~~~-------~~~~~~~~~~-~~~~~g~~~~~-~~~~~---~~ 88 (245)
T 1h7e_A 26 GKPMIQHVYERALQVAGV-AE--VWVATDD--PRVEQAVQ-------AFGGKAIMTR-NDHESGTDRLV-EVMHK---VE 88 (245)
T ss_dssp TEEHHHHHHHHHHTCTTC-CE--EEEEESC--HHHHHHHH-------HTTCEEEECC-SCCSSHHHHHH-HHHHH---SC
T ss_pred CchHHHHHHHHHHhCCCC-Ce--EEEECCc--HHHHHHHH-------HcCCeEEeCC-CccCCcHHHHH-HHHHh---CC
Confidence 446888999998876432 23 4444332 33333322 3467665421 22233455544 44442 25
Q ss_pred ccEEEEEcCCCC-CCHHHHHHHHHHHccC
Q 041566 324 YEFVAIFDADFQ-PTPDFLKKTIPYFKGN 351 (687)
Q Consensus 324 ~d~V~~lDaD~~-~~pd~L~~lv~~f~~~ 351 (687)
.|.++++++|.- .+++.+++++..+.++
T Consensus 89 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 89 ADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 789999999994 5899999999988654
No 37
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=64.57 E-value=33 Score=36.59 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCc
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDY 324 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~ 324 (687)
...++.+++++.+.. -++ |+|+-....+...+.++ +.++.++ ..+ ...|-++++..+++. ..+.
T Consensus 36 ~pli~~~l~~l~~~~--~~~--i~vv~~~~~~~i~~~~~-------~~~~~~v--~~~-~~~g~~~~i~~~~~~--~~~~ 99 (459)
T 4fce_A 36 KPMVQHVIDAAMKLG--AQH--VHLVYGHGGELLKKTLA-------DPSLNWV--LQA-EQLGTGHAMQQAAPH--FADD 99 (459)
T ss_dssp EEHHHHHHHHHHHHT--CSC--EEEEESSCHHHHHHHC------------CEE--ECS-SCCCHHHHHHHHGGG--SCTT
T ss_pred eeHHHHHHHHHHhCC--CCc--EEEEeCCCHHHHHHHhc-------cCCcEEE--eCC-CCCCcHHHHHHHHHh--cCCC
Confidence 368888999888764 223 44444333333332222 2334433 223 333478889999874 3346
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHHccCCCeEEEe
Q 041566 325 EFVAIFDADF-QPTPDFLKKTIPYFKGNDDLALVQ 358 (687)
Q Consensus 325 d~V~~lDaD~-~~~pd~L~~lv~~f~~~p~vg~Vq 358 (687)
|.++++++|. ..+++.+++++..+.+ .+..++.
T Consensus 100 ~~~lv~~~D~P~i~~~~i~~l~~~~~~-~~~~~~~ 133 (459)
T 4fce_A 100 EDILMLYGDVPLISVDTLQRLLAAKPE-GGIGLLT 133 (459)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEEEE
T ss_pred CcEEEEeCCcccCCHHHHHHHHHHHhh-CCEEEEE
Confidence 8999999999 6799999999998874 4444443
No 38
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=62.35 E-value=30 Score=33.73 Aligned_cols=98 Identities=8% Similarity=0.045 Sum_probs=56.6
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhccccc--
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYV-- 321 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~-- 321 (687)
....+..+|+++.+..... + |+|+-+.... +.+++.++++.. +..+.+.. . ..+..+++..|++....
T Consensus 31 Gkpll~~~l~~~~~~~~~~-~--ivvv~~~~~~---~~~~~~~~~~~~-~~~~~~~~--~-~~~~~~sv~~al~~l~~~~ 100 (246)
T 3f1c_A 31 GKPIIVHTVEKFILNTRFD-K--ILISSPKEWM---NHAEDNIKKYIS-DDRIVVIE--G-GEDRNETIMNGIRFVEKTY 100 (246)
T ss_dssp TEEHHHHHHHHHHTCTTCS-E--EEEEECGGGH---HHHHHHHHHHCC-CTTEEEEE--C-CSSHHHHHHHHHHHHHHHT
T ss_pred CeeHHHHHHHHHHcCCCCC-E--EEEEeCHHHH---HHHHHHHHHhCC-CCCEEEEC--C-CCchHHHHHHHHHHHhhhh
Confidence 3468899999988764222 3 3344332221 223333333321 11222222 1 12356677777763211
Q ss_pred --CCccEEEEEcCCC-CCCHHHHHHHHHHHccC
Q 041566 322 --KDYEFVAIFDADF-QPTPDFLKKTIPYFKGN 351 (687)
Q Consensus 322 --a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~ 351 (687)
.+.|+|+++|+|. .++++.+++++..+.++
T Consensus 101 ~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~ 133 (246)
T 3f1c_A 101 GLTDDDIIVTHDAVRPFLTHRIIEENIDAALET 133 (246)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 2368999999998 67999999999998764
No 39
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=62.01 E-value=34 Score=32.62 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=55.4
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccC----CCCChHhHHHHHhccc
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLI----RSGYKAGNLNSAMGCD 319 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~----~~ggKa~aLn~gl~~~ 319 (687)
....++.+++.+.+...- ++ |+|+-+ ++...+.++ ..+++++. ++. ...+..+++..|++..
T Consensus 28 gkpll~~~l~~~~~~~~~-~~--ivvv~~--~~~i~~~~~-------~~~~~~~~--~~~~~~~~~~g~~~sv~~~l~~~ 93 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DR--IIVSTD--GGLIAEEAK-------NFGVEVVL--RPAELASDTASSISGVIHALETI 93 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SE--EEEEES--CHHHHHHHH-------HTTCEEEE--CCC------CHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCC-CE--EEEECC--CHHHHHHHH-------HcCCEEEe--CchHHcCCCCChHHHHHHHHHHh
Confidence 345788888888765421 23 444443 233333222 34666532 221 2224566777777632
Q ss_pred ccCCccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 320 YVKDYEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 320 ~~a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
..+.|.++++++|. ..+++.+++++..+.+
T Consensus 94 -~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 94 -GSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp -TCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred -CCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 12468999999998 5689999999987764
No 40
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=61.10 E-value=44 Score=33.77 Aligned_cols=95 Identities=7% Similarity=0.062 Sum_probs=56.1
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhh-cCc-EEEEEeccCCCCChHhHHHHHh
Q 041566 239 IPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQ-RGV-HIIYRHRLIRSGYKAGNLNSAM 316 (687)
Q Consensus 239 IP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~-~~v-~i~~~~r~~~~ggKa~aLn~gl 316 (687)
+|..+....++.+++.+.+. . +++ ++++++...+ .+++.+. + .++ ++.+...+ ...|-++++..+.
T Consensus 31 l~i~gg~pli~~~l~~l~~~--~-~~i-~vv~~~~~~~----~i~~~~~---~~~~~~~~~~i~~~-~~~gt~~al~~a~ 98 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL--V-DET-LIVCNEKHYF----LALEEIK---NEIKNKSVGFLLES-LSKNTANAIALSA 98 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT--C-SEE-EEEEEGGGHH----HHHHHTT---TTCSSCEEEEEEES-SCCCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHcc--C-CCE-EEEEChhHHH----HHHHHHH---HhhCCCccEEEeCC-CCCChHHHHHHHH
Confidence 44444456888899988876 2 233 3344332112 2222221 2 344 44444323 3345888888887
Q ss_pred cccccCCccEEEEEcCCCCC-CHHHHHHHHHH
Q 041566 317 GCDYVKDYEFVAIFDADFQP-TPDFLKKTIPY 347 (687)
Q Consensus 317 ~~~~~a~~d~V~~lDaD~~~-~pd~L~~lv~~ 347 (687)
.. ....++++++.+|... +++.+.+++..
T Consensus 99 ~~--l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LM--SDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HT--SCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HH--hCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 63 2235689999999987 78888888875
No 41
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=61.08 E-value=58 Score=31.58 Aligned_cols=97 Identities=11% Similarity=0.127 Sum_probs=55.8
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhccccc-
Q 041566 243 NEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYV- 321 (687)
Q Consensus 243 NE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~- 321 (687)
+....+..+++++.+.... ++ |+|+-+... .+.+++.. ...+.++ . . ......++..|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~--ivVv~~~~~---~~~~~~~~----~~~v~~v--~--g-g~~r~~sv~~gl~~~~~~ 97 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DT--VVVAVPADR---TDEARQIL----GHRAMIV--A--G-GSNRTDTVNLALTVLSGT 97 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CE--EEEEECGGG---HHHHHHHH----GGGCEEE--E--C-CSSHHHHHHHHHGGGC--
T ss_pred CCeEHHHHHHHHHHhCCCC-Ce--EEEECChHH---HHHHHHHh----cCCeEEE--c--C-CCchHHHHHHHHHHhhhc
Confidence 3446889999998765322 23 444443222 11222222 1234333 1 1 11245677788874211
Q ss_pred CCccEEEEEcCCC-CCCHHHHHHHHHHHccCCCe
Q 041566 322 KDYEFVAIFDADF-QPTPDFLKKTIPYFKGNDDL 354 (687)
Q Consensus 322 a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~p~v 354 (687)
.+.|+|++.|+|. .++++.+++++..+.++.+.
T Consensus 98 ~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~ 131 (231)
T 3q80_A 98 AEPEFVLVHDAARALTPPALVARVVEALRDGYAA 131 (231)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSE
T ss_pred CCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCe
Confidence 1268999999998 66999999999998753343
No 42
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=59.53 E-value=8.9 Score=38.33 Aligned_cols=102 Identities=10% Similarity=0.075 Sum_probs=60.1
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHH------------------HHHHHhhcCcEEEEEe
Q 041566 239 IPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKA------------------EVLKWQQRGVHIIYRH 300 (687)
Q Consensus 239 IP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~------------------~~~~~~~~~v~i~~~~ 300 (687)
+|.-+. ..++.+|+++.+.. -++ |+|+-....+...+.+.. ..+.. ..+.++.+..
T Consensus 28 l~i~gk-pli~~~l~~l~~~g--i~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~ 101 (281)
T 3juk_A 28 LPIVDK-PLIQYAVEEAMEAG--CEV--MAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNI-IEKCCFSYVR 101 (281)
T ss_dssp CBSSSS-BHHHHHHHHHHHHT--CCE--EEEEECTTHHHHHHHTSCCC--------CCHHHHHHHHHHH-HHHCEEEEEE
T ss_pred ceECCE-EHHHHHHHHHHhCC--CCE--EEEEecCCHHHHHHHHhcchhhhhhhhcccchhhhhhhhcc-ccCccEEEEe
Confidence 444454 68888888888754 223 444443332333222210 00000 0245666654
Q ss_pred ccCCCCChHhHHHHHhcccccCCccEEEEEcCCCCCCHH----HHHHHHHHHcc
Q 041566 301 RLIRSGYKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPD----FLKKTIPYFKG 350 (687)
Q Consensus 301 r~~~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd----~L~~lv~~f~~ 350 (687)
... ..|-++++..++.. .+.+.++++.+|...+++ .+++++..+.+
T Consensus 102 ~~~-~~Gt~~al~~a~~~---l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 102 QKQ-MKGLGHAILTGEAL---IGNEPFAVILADDLCISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp CSS-CCCHHHHHHHTHHH---HCSSCEEEECTTEEEECTTSCCHHHHHHHHHHH
T ss_pred cCC-CCCcHHHHHHHHHH---cCCCCEEEEeCCeeccCccchHHHHHHHHHHHH
Confidence 333 34578888888773 234678899999977888 89999988764
No 43
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=59.38 E-value=38 Score=33.88 Aligned_cols=100 Identities=9% Similarity=0.017 Sum_probs=57.6
Q ss_pred eEEEEeecCCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCC--C---
Q 041566 234 MVLVQIPMCNER--EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRS--G--- 306 (687)
Q Consensus 234 ~VsViIP~yNE~--~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~--g--- 306 (687)
.+.|++.+ |+. ..+..++.|++... +...+.+.|++|+-+++..+.+++..+ ..+.++....-.... +
T Consensus 5 ~i~I~~~~-d~~Y~~~~~v~i~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~ 79 (276)
T 3tzt_A 5 ADALLLTL-DENYIPQMKVLMTSIYINN-PGRIFDVYLIHSRISEDKLKDLGEDLK---KFSYTLYPIRATDDLFSFAKV 79 (276)
T ss_dssp CEEEEEEC-CGGGHHHHHHHHHHHHHHS-TTCCEEEEEEESCCCHHHHHHHHHHHH---TTTCEEEEEECC---------
T ss_pred eEEEEEEe-CHhHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCCHHHHHHHHHHHH---HcCCEEEEEEeCHHHHhcCcc
Confidence 36666544 544 77888999998754 334688888888888877777776554 345555544322110 0
Q ss_pred ---ChHhHH-HHHhcccccCCccEEEEEcCCCCCCH
Q 041566 307 ---YKAGNL-NSAMGCDYVKDYEFVAIFDADFQPTP 338 (687)
Q Consensus 307 ---gKa~aL-n~gl~~~~~a~~d~V~~lDaD~~~~p 338 (687)
....+. ...+......+.|-|+.+|+|+++-.
T Consensus 80 ~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~ 115 (276)
T 3tzt_A 80 TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN 115 (276)
T ss_dssp ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS
T ss_pred ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC
Confidence 000111 11111011236899999999997744
No 44
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=59.36 E-value=58 Score=34.57 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCc
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDY 324 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~ 324 (687)
...++.+++++.+.. -++ |+|+-+...+. +++.. .+.++.++ ..+ ...|-++++..+++. ..+.
T Consensus 33 kpli~~~l~~l~~~~--~~~--iivv~~~~~~~----i~~~~---~~~~~~~v--~~~-~~~g~~~~~~~~~~~--~~~~ 96 (456)
T 2v0h_A 33 KPMVKHVIDTAHQLG--SEN--IHLIYGHGGDL----MRTHL---ANEQVNWV--LQT-EQLGTAHAVQQAAPF--FKDN 96 (456)
T ss_dssp EEHHHHHHHHHHHTT--CSC--EEEEECTTHHH----HHHHT---TTCCCEEE--ECS-CCCCHHHHHHHHGGG--CCTT
T ss_pred ccHHHHHHHHHHhCC--CCc--EEEEeCCCHHH----HHHHh---hcCCcEEE--eCC-CCCCcHHHHHHHHHh--cCCC
Confidence 368888999988764 223 33343322222 22211 12245543 222 233477888888873 2347
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHHccCCCeEEEe
Q 041566 325 EFVAIFDADF-QPTPDFLKKTIPYFKGNDDLALVQ 358 (687)
Q Consensus 325 d~V~~lDaD~-~~~pd~L~~lv~~f~~~p~vg~Vq 358 (687)
|.++++++|. ..+++.+++++..+.+ .++.++.
T Consensus 97 ~~vlv~~~D~P~i~~~~i~~l~~~~~~-~~~~~~~ 130 (456)
T 2v0h_A 97 ENIVVLYGDAPLITKETLEKLIEAKPE-NGIALLT 130 (456)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEEEE
T ss_pred CeEEEEcCCcceeCHHHHHHHHHHHhc-CCEEEEE
Confidence 8999999999 5689999999988764 4444433
No 45
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=58.87 E-value=66 Score=30.48 Aligned_cols=97 Identities=7% Similarity=0.026 Sum_probs=57.3
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhccccc-
Q 041566 243 NEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYV- 321 (687)
Q Consensus 243 NE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~- 321 (687)
+....++.+++.+.+..... + |+|+-+...+...+ +. ++... .+.+. .. ..+..+++..|++....
T Consensus 32 ~gkpli~~~l~~l~~~~~~~-~--ivvv~~~~~~~~~~-~~----~~~~~--~i~~~--~~-~~~~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAVD-L--TVVVVSPEDTFADK-VQ----TAFPQ--VRVWK--NG-GQTRAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTCC-E--EEEECCTTCSTHHH-HH----HHCTT--SEEEC--CC-CSSHHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCCC-e--EEEEECccHHHHHH-HH----hcCCC--ceEEE--cC-CCcHHHHHHHHHHHHhhh
Confidence 34568889999988754222 3 45554433333333 22 11111 23222 22 23477778877763111
Q ss_pred ---CCccEEEEEcCCC-CCCHHHHHHHHHHHccCC
Q 041566 322 ---KDYEFVAIFDADF-QPTPDFLKKTIPYFKGND 352 (687)
Q Consensus 322 ---a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~p 352 (687)
.+.|.++++++|. ..+++.+++++..+..++
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 1468999999998 568999999999886543
No 46
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=56.87 E-value=8.6 Score=38.90 Aligned_cols=108 Identities=12% Similarity=0.070 Sum_probs=62.2
Q ss_pred CCccEEEEEcCCCCCCHHHHHHHHHHHccCCCeEEEeeeeeeccCCCChhHHhhhhhhhhhHHHHHhhcccccccccccc
Q 041566 322 KDYEFVAIFDADFQPTPDFLKKTIPYFKGNDDLALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNG 401 (687)
Q Consensus 322 a~~d~V~~lDaD~~~~pd~L~~lv~~f~~~p~vg~Vqg~~~~~n~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~G 401 (687)
.+.+++++.|+|+.+..+-|.+.+..+. |+-...-|........+ ..++.-. .... .....++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~d--~~~~~YiG~~~~~~~~~-------~~~~~~~-~~~~----~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTFP--QDRDVYVGKPSLNRPIH-------ASELQSK-QRTK----LVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTSC--TTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhCC--CCCCEEEEEeccCcccc-------ccccCcc-cccc----ccccCcccCC
Confidence 5899999999999999999999888774 33222223221111000 0000000 0000 0011233568
Q ss_pred ceEEEehhhhhhhCCCC----------CCCccchHHHHHHHH-HcCCeEEEEc
Q 041566 402 TAGVWRIKALEECGGWL----------DRTTVEDMDIAVRAH-LCGWKFVYVN 443 (687)
Q Consensus 402 ~~~~~Rr~aL~~iGGf~----------~~~~~ED~~l~~rl~-~~G~ri~~~~ 443 (687)
++.++.|++++++..+. .....||..++.-+. ..|.+....+
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 89999999998863211 112358999999998 7898877654
No 47
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=56.54 E-value=15 Score=34.54 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+. ++ |+|+.+ ..+ .+++.+ ..++ ++. .+....|-.+++..|++. ..+
T Consensus 27 g~pll~~~l~~l~~~-----~i-vvv~~~-~~~----~~~~~~----~~~~-~v~--~~~~~~G~~~si~~al~~--~~~ 86 (197)
T 3d5n_A 27 NTPIIMRTIRIYGDL-----EK-IIIVGK-YVN----EMLPLL----MDQI-VIY--NPFWNEGISTSLKLGLRF--FKD 86 (197)
T ss_dssp SSBHHHHHHHHTTTS-----BC-CEEECT-THH----HHGGGC----TTSC-EEE--CTTGGGCHHHHHHHHHHH--TTT
T ss_pred ceEHHHHHHHHHHhC-----CE-EEEECC-CHH----HHHHHh----cCCE-EEE--CCCCCCCHHHHHHHHHHh--hcc
Confidence 346788888887654 23 333332 212 222111 1344 332 222222467788888873 223
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHH
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYF 348 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f 348 (687)
.|.++++++|. .++++.+++++..+
T Consensus 87 ~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 87 YDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CCcEEEEeCCccccCHHHHHHHHHHh
Confidence 48999999999 66999999999877
No 48
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=52.59 E-value=38 Score=31.83 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+... .++ |+|+-+...+ + +. ..+++++... .....|-.+++..|++ ..+
T Consensus 32 G~pli~~~l~~l~~~---~~~--ivvv~~~~~~---~-~~-------~~~~~~v~~~-~~~~~G~~~si~~~l~---~~~ 91 (201)
T 1e5k_A 32 GKPLWQHVADALMTQ---LSH--VVVNANRHQE---I-YQ-------ASGLKVIEDS-LADYPGPLAGMLSVMQ---QEA 91 (201)
T ss_dssp TEEHHHHHHHHHHHH---CSC--EEEECSSSHH---H-HH-------TTSCCEECCC-TTCCCSHHHHHHHHHH---HCC
T ss_pred ceeHHHHHHHHHHhh---CCE--EEEEcCCcHH---H-Hh-------hcCCeEEecC-CCCCCCHHHHHHHHHH---hCC
Confidence 346778888877642 223 4555432211 1 11 3456554221 1121357888888888 345
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHH
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPY 347 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~ 347 (687)
.|+++++++|. .++++.+++++..
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 92 GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 79999999999 6789999999887
No 49
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=52.47 E-value=84 Score=31.60 Aligned_cols=100 Identities=6% Similarity=-0.082 Sum_probs=57.8
Q ss_pred eecC-CchHHHHHHHHHHHcCCCCCCceEEEEEcCCC-ChhHHHHHHHHHHHHhhcCcEEEEEeccC-------------
Q 041566 239 IPMC-NEREVYGQSIAAVCIQDWPKERMLVQILDDSD-DLDVQLLIKAEVLKWQQRGVHIIYRHRLI------------- 303 (687)
Q Consensus 239 IP~y-NE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s-~d~t~~~l~~~~~~~~~~~v~i~~~~r~~------------- 303 (687)
+|.- +....++.+++.+.+.. -++ |+|+-... .+...+.+.. ....+.++.+.....
T Consensus 26 ~~ig~~g~pli~~~l~~~~~~~--~~~--i~vv~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 97 (303)
T 3pnn_A 26 DGIGPGGDTIMDYSVYDAIRAG--FGR--LVFVIRHSFEKEFREKILT----KYEGRIPVELVFQELDRLPEGFSCPEGR 97 (303)
T ss_dssp CCCSTTSCCHHHHHHHHHHHHT--CCE--EEEEECGGGHHHHHHHTHH----HHTTTSCEEEEECCTTCCCTTCCCCTTC
T ss_pred eEcCCCCeeHHHHHHHHHHHCC--CCe--EEEEcCchHHHHHHHHHHH----HhccCCcEEEEecccccccccccccccc
Confidence 4552 33468888888887654 223 44444332 2333333321 112345555543331
Q ss_pred -CCCChHhHHHHHhcccccCCccEEEEEcCCCCCCHHHHHHHHHHHcc
Q 041566 304 -RSGYKAGNLNSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKG 350 (687)
Q Consensus 304 -~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~~ 350 (687)
...|-++++..+... -+.+ ++++.+|...+++.+++++....+
T Consensus 98 ~~~~Gt~~al~~a~~~---i~~~-~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 98 EKPWGTNHAVLMGRDA---IREP-FAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CSCCCHHHHHHTTTTT---CCSC-EEEEESSCBCCHHHHHHHHHHHHT
T ss_pred cccCCcHHHHHHHHHh---cCCC-EEEEECCeecCHHHHHHHHHHHHH
Confidence 233578888877763 2444 556789999999999999998863
No 50
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=51.43 E-value=29 Score=32.21 Aligned_cols=93 Identities=12% Similarity=0.166 Sum_probs=54.4
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.. -++ |+|+-+..++.+.+.+++. + .....+.... .. ..|-.+++..|++. .
T Consensus 26 g~pli~~~l~~l~~~~--~~~--v~vv~~~~~~~i~~~~~~~---~-~~~~~~~~~~-~~-~~g~~~si~~al~~---~- 91 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSK--VNN--IFIATSPNTPKTKEYINSA---Y-KDYKNIVVID-TS-GKGYIEDLNECIGY---F- 91 (196)
T ss_dssp TEEHHHHHHHHHHSSS--CCC--EEEECCTTCHHHHHHHHHH---T-TTTTEEEE----------CCCCCTTTTT---C-
T ss_pred CEEHHHHHHHHHHHCC--CCE--EEEEeCCChHHHHHHHHhh---c-cCCCCEEEEE-CC-CCCcHHHHHHHHHh---C-
Confidence 3468899999998765 223 5555544455555444321 1 1111332222 11 22345556666662 2
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
.|.++++++|. ..+++.+++++..+.+
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 78999999999 5699999999999874
No 51
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=51.42 E-value=52 Score=31.26 Aligned_cols=98 Identities=11% Similarity=0.084 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCC-hhHHHHHHHHHHHHhh-cCcEEEEEeccCCCCChHhHHHHHhccccc
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDD-LDVQLLIKAEVLKWQQ-RGVHIIYRHRLIRSGYKAGNLNSAMGCDYV 321 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~-d~t~~~l~~~~~~~~~-~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~ 321 (687)
....++.+++++.+..... + |+|+-+... +...+.+ .++.- ........ . ...+...++..|++....
T Consensus 30 g~pli~~~l~~l~~~~~~~-~--i~vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~-~~~~~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPSIE-K--IVVGVHGDWVSHAEDLV----DKYLPLYKERIIIT--K-GGADRNTSIKNIIEAIDA 99 (236)
T ss_dssp TEEHHHHHHHHHHTCTTCC-C--EEEEECGGGHHHHHHHH----HHHCGGGGGGEEEE--E-CCSSHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCCC-e--EEEEeCHHHHHHHHHHH----HhccccccCceEEE--C-CCCchHHHHHHHHHHHHh
Confidence 3468889999988753222 3 444443322 2233332 22210 00011111 1 112366777777763110
Q ss_pred --C--CccEEEEEcCCC-CCCHHHHHHHHHHHccC
Q 041566 322 --K--DYEFVAIFDADF-QPTPDFLKKTIPYFKGN 351 (687)
Q Consensus 322 --a--~~d~V~~lDaD~-~~~pd~L~~lv~~f~~~ 351 (687)
. +.|+++++++|. ..+++.+++++..+..+
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 2 458999999999 77999999999988753
No 52
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=47.52 E-value=94 Score=29.11 Aligned_cols=89 Identities=13% Similarity=0.128 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.... ++ |+|+-+.... +.+++.. . +..+.+... . .+..+++..|++.. .+
T Consensus 29 g~pli~~~l~~l~~~~~~-~~--i~vv~~~~~~---~~~~~~~----~-~~~v~~~~~--~-~~~~~~i~~al~~~--~~ 92 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVI-DR--IVIAVPPALT---DESKLVF----G-GEDSVIVSG--G-VDRTESVALALEAA--GD 92 (223)
T ss_dssp TEEHHHHHHHHHHHHSCC-SE--EEEEECGGGH---HHHHHHT----C-BTTEEEEEC--C-SSHHHHHHHHHTTC--TT
T ss_pred CeEHHHHHHHHHhcCCCC-Ce--EEEEEcccHH---HHHHHHh----c-cCCeEEEcC--C-CCHHHHHHHHHHhc--CC
Confidence 346788888888765322 23 4444432221 1122211 1 222333321 1 23677888888732 26
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHH
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYF 348 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f 348 (687)
.|+++++++|. ..+++.+++++..+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 78999999999 56999999999988
No 53
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=45.28 E-value=85 Score=29.89 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+.... + +|+|+-+...+...+ +. .+....+. +.. ... +..+++..|++. ..+
T Consensus 34 g~pll~~~i~~l~~~~~~-~--~ivvv~~~~~~~~~~-~~----~~~~~~v~--~~~--~~~-g~~~~i~~al~~--~~~ 98 (236)
T 1i52_A 34 NQTILEHSVHALLAHPRV-K--RVVIAISPGDSRFAQ-LP----LANHPQIT--VVD--GGD-ERADSVLAGLKA--AGD 98 (236)
T ss_dssp TEEHHHHHHHHHHTSTTE-E--EEEEEECTTCCSGGG-SG----GGGCTTEE--EEE--CCS-SHHHHHHHHHHT--STT
T ss_pred CEEHHHHHHHHHHhCCCC-C--eEEEEeCccHHHHHH-HH----hcCCCCEE--EEC--CCC-CHHHHHHHHHHh--cCC
Confidence 446888899988765321 1 244444433333332 21 11111233 222 122 477888888873 224
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHccCC
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKGND 352 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~~p 352 (687)
.|.++++++|. ..+++.+++++..+..++
T Consensus 99 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 99 AQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 78999999998 568999999998886543
No 54
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=45.18 E-value=26 Score=34.67 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCC-ChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSD-DLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s-~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
...++.+|+++.+.. -++ |+|+-+.. .+...+.+. .....++++.+.... ...|-++++..+++. .+
T Consensus 55 ~pli~~~l~~l~~~g--~~~--iivv~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~-~~~G~~~al~~a~~~---~~ 122 (269)
T 4ecm_A 55 YPMIYHAVYKLKQCD--ITD--IMIITGKEHMGDVVSFLG----SGQEFGVSFTYRVQD-KAGGIAQALGLCEDF---VG 122 (269)
T ss_dssp EEHHHHHHHHHHHTT--CCE--EEEEECTTTHHHHHHHHT----TSGGGTCEEEEEECS-SCCCHHHHHHTTHHH---HT
T ss_pred EEHHHHHHHHHHHCC--CCE--EEEECChhhHHHHHHHHh----hccccCceEEEeeCC-ccCcHHHHHHHHHHh---cC
Confidence 357889999988764 223 44444332 233322221 111245666665433 344578888877763 23
Q ss_pred ccEEEEEcCCCCCCHHHHHHHHHHHcc
Q 041566 324 YEFVAIFDADFQPTPDFLKKTIPYFKG 350 (687)
Q Consensus 324 ~d~V~~lDaD~~~~pd~L~~lv~~f~~ 350 (687)
.+.++++.+|.... ..+.+++..+.+
T Consensus 123 ~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 123 NDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp TSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred CCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 67899999999665 567788877754
No 55
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=44.18 E-value=75 Score=30.02 Aligned_cols=93 Identities=11% Similarity=-0.024 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCc
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDY 324 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~ 324 (687)
...++.+++.+.+.... + +|+|+-+...+.. .+.... ..+.++.+.. .. .+..+++..|++.. ..+.
T Consensus 32 ~pli~~~l~~l~~~~~~-~--~ivvv~~~~~~~~---~~~~~~---~~~~~v~~~~--~~-~~~~~sv~~al~~~-~~~~ 98 (228)
T 2yc3_A 32 QPIALYSFFTFSRMPEV-K--EIVVVCDPFFRDI---FEEYEE---SIDVDLSFAI--PG-KERQDSVYSGLQEI-DVNS 98 (228)
T ss_dssp EEHHHHHHHHHHHCTTE-E--EEEEECCGGGHHH---HHTTTT---TSSSEEEEEC--CC-SSHHHHHHHHHTTS-CTTC
T ss_pred EEHHHHHHHHHHcCCCC-C--eEEEEEChHHHHH---HHHHHH---hCCCcEEEEC--CC-CCHHHHHHHHHHhh-ccCC
Confidence 45788889888765211 1 3555544332222 111111 1234454442 11 34678888888742 1236
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 325 EFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 325 d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
++|+++|+|. ..+++.+++++..+.+
T Consensus 99 ~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 99 ELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 8999999997 6799999999998864
No 56
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=44.13 E-value=27 Score=35.09 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHH---HHHHhh-------------cCcEEEEEeccCCCCCh
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAE---VLKWQQ-------------RGVHIIYRHRLIRSGYK 308 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~---~~~~~~-------------~~v~i~~~~r~~~~ggK 308 (687)
...++.+++.+.+.. -++ |+|+-+...+...+.+... ..+... .+.++.+...+ ...|-
T Consensus 45 kpli~~~l~~l~~~g--~~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~-~~~Gt 119 (297)
T 2ux8_A 45 RPLIQYAVDEAVEAG--IEQ--MIFVTGRGKSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQ-EPMGL 119 (297)
T ss_dssp EEHHHHHHHHHHHTT--CCE--EEEEECTTCHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECC-SCCCH
T ss_pred eEHHHHHHHHHHhCC--CCE--EEEEeCCCHHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCC-CCCCh
Confidence 368888999888764 223 4444444444444333210 000000 24455554433 33457
Q ss_pred HhHHHHHhcccccCCccEEEEEcCCCCCC--HHHHHHHHHHHcc
Q 041566 309 AGNLNSAMGCDYVKDYEFVAIFDADFQPT--PDFLKKTIPYFKG 350 (687)
Q Consensus 309 a~aLn~gl~~~~~a~~d~V~~lDaD~~~~--pd~L~~lv~~f~~ 350 (687)
++++..++.. .+.+.++++.+|...+ +..+++++..+.+
T Consensus 120 ~~al~~a~~~---~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 120 GHAVWCARDI---VGDEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp HHHHHTTHHH---HCSSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH---cCCCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 7888777663 2357889999999876 6789999988764
No 57
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=42.55 E-value=31 Score=35.11 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=48.6
Q ss_pred HHHHHHHHHH-HcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCC-----C--CC---hHhHHHH
Q 041566 246 EVYGQSIAAV-CIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIR-----S--GY---KAGNLNS 314 (687)
Q Consensus 246 ~~l~~tL~Sl-~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~-----~--gg---Ka~aLn~ 314 (687)
..+..++.|+ +... +..+.++|++|+-+++..+.+++... ..+..+....-... . .+ ...-...
T Consensus 13 ~~~~vli~Sl~l~~~--~~~~~f~il~~~ls~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 87 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHP--DTEIRFHVLDAGISEANRAAVAANLR---GGGGNIRFIDVNPEDFAGFPLNIRHISITTYARL 87 (311)
T ss_dssp HHHHHHHHHHHHTCT--TSCCEEEEEESSCCHHHHHHHHHHSG---GGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGG
T ss_pred HHHHHHHHHHHHHcC--CCCceEEEEECCCCHHHHHHHHHHHH---HcCCEEEEEEcCHHHHhcCccccccCCHHHHHHH
Confidence 6677889999 6543 33577888888877777777766543 22444443321110 0 00 0000000
Q ss_pred HhcccccCCccEEEEEcCCCCCCHH
Q 041566 315 AMGCDYVKDYEFVAIFDADFQPTPD 339 (687)
Q Consensus 315 gl~~~~~a~~d~V~~lDaD~~~~pd 339 (687)
.+. ....+.|-|+.+|+|+++-.|
T Consensus 88 ~l~-~ll~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 88 KLG-EYIADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GHH-HHCCSCSCEEEECSSEEECSC
T ss_pred HHH-HHhhhcCEEEEEcCCeEeccC
Confidence 011 112467899999999987543
No 58
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=36.73 E-value=57 Score=32.68 Aligned_cols=102 Identities=13% Similarity=0.051 Sum_probs=58.2
Q ss_pred ecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHH---HHHH------------h---hcCcEEEEEec
Q 041566 240 PMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAE---VLKW------------Q---QRGVHIIYRHR 301 (687)
Q Consensus 240 P~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~---~~~~------------~---~~~v~i~~~~r 301 (687)
|..+ ...++.+++.+.+.. -++ |+|+-+...+...+.+... ..+. . ..++++.+...
T Consensus 35 ~i~g-kpli~~~l~~l~~~g--i~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~ 109 (302)
T 2e3d_A 35 PLVD-KPLIQYVVNECIAAG--ITE--IVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQ 109 (302)
T ss_dssp EETT-EEHHHHHHHHHHHTT--CCE--EEEEECGGGHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEEC
T ss_pred EECC-eEHHHHHHHHHHHCC--CCE--EEEEeCCCHHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeC
Confidence 3334 368888999888764 223 4444433333333332210 0000 0 12556655543
Q ss_pred cCCCCChHhHHHHHhcccccCCccEEEEEcCCCCCC----HH---HHHHHHHHHcc
Q 041566 302 LIRSGYKAGNLNSAMGCDYVKDYEFVAIFDADFQPT----PD---FLKKTIPYFKG 350 (687)
Q Consensus 302 ~~~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~~~~----pd---~L~~lv~~f~~ 350 (687)
. ...|-++++..+... .+.+.++++.+|...+ +. .+++++..+.+
T Consensus 110 ~-~~~Gt~~al~~a~~~---~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~ 161 (302)
T 2e3d_A 110 G-LAKGLGHAVLCAHPV---VGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_dssp S-SCCCHHHHHHHTHHH---HCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHH
T ss_pred C-ccCCHHHHHHHHHHH---cCCCcEEEEcCCccccCccccchHHHHHHHHHHHHh
Confidence 3 334588888888763 2346788999999776 45 78899887764
No 59
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=34.65 E-value=1.1e+02 Score=31.87 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+..... + |+|+-+ ..+ .+++.. .++.++ .. ..+...++..|++. .+
T Consensus 30 GkPLi~~~l~~l~~~~~~~-~--IvVvt~-~~~----~i~~~~-----~~v~~v----~~-g~g~~~sv~~aL~~---l~ 88 (371)
T 1w55_A 30 NDPLWLYATKNLSSFYPFK-K--IVVTSS-NIT----YMKKFT-----KNYEFI----EG-GDTRAESLKKALEL---ID 88 (371)
T ss_dssp TEEHHHHHHHHHHTTSCCS-C--EEEEES-CHH----HHHTTC-----SSSEEE----EC-CSSHHHHHHHHHTT---CC
T ss_pred CeEHHHHHHHHHHccCCCC-e--EEEEcC-CHH----HHHHHh-----CCCEEE----eC-CCChHHHHHHHHHh---cC
Confidence 3468888999887643222 3 444444 222 222111 124433 11 22466788888873 34
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHHccC
Q 041566 324 YEFVAIFDADF-QPTPDFLKKTIPYFKGN 351 (687)
Q Consensus 324 ~d~V~~lDaD~-~~~pd~L~~lv~~f~~~ 351 (687)
.|+++++|+|. ..+++.+++++..+.++
T Consensus 89 ~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 89 SEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 79999999998 56999999999888753
No 60
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=32.77 E-value=83 Score=31.90 Aligned_cols=101 Identities=10% Similarity=-0.057 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHH---------------HHHHHh--hcCcEEEEEeccCCCCC
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKA---------------EVLKWQ--QRGVHIIYRHRLIRSGY 307 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~---------------~~~~~~--~~~v~i~~~~r~~~~gg 307 (687)
...++.+++.+.+.. -++ |+|+-+...+...+.+.. ..+... ..+.++.+...+. ..|
T Consensus 43 kpli~~~l~~l~~~g--i~~--iivv~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~i~~~~~~~-~~G 117 (323)
T 2pa4_A 43 TPGIELIAAEAAELG--ATR--LAIITAPNKAGVLAHFERSSELEETLMERGKTDQVEIIRRAADLIKAVPVTQDK-PLG 117 (323)
T ss_dssp EEHHHHHHHHHHHTT--CCE--EEEEECTTCHHHHHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHCEEEEEECSS-CCC
T ss_pred EEHHHHHHHHHHhCC--CCE--EEEEecCcHHHHHHHHhccchhhhhhhccchhhhhhhhhccccCcceEEEeCCc-cCC
Confidence 367888899888754 223 444444333433332210 000000 0245555554333 345
Q ss_pred hHhHHHHHhcccccCCccEEEEEcCCCCCC-HHHHHHHHHHHccC
Q 041566 308 KAGNLNSAMGCDYVKDYEFVAIFDADFQPT-PDFLKKTIPYFKGN 351 (687)
Q Consensus 308 Ka~aLn~gl~~~~~a~~d~V~~lDaD~~~~-pd~L~~lv~~f~~~ 351 (687)
-++++..++... ..+.|+++++.+|...+ +..+++++..+..+
T Consensus 118 t~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~ 161 (323)
T 2pa4_A 118 LGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF 161 (323)
T ss_dssp HHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhc
Confidence 888888877631 12345689999999876 68899999888653
No 61
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=32.69 E-value=93 Score=33.14 Aligned_cols=94 Identities=7% Similarity=-0.043 Sum_probs=56.2
Q ss_pred ecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhccc
Q 041566 240 PMCNEREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCD 319 (687)
Q Consensus 240 P~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~ 319 (687)
|..+ ...++.+++.+.+.. -++ |+|+-+...+. +++.. ..++.++. +....|-++++..+++..
T Consensus 35 ~i~g-kpli~~~l~~l~~~g--~~~--iivv~~~~~~~----i~~~~----~~~i~~v~---~~~~~G~~~sl~~a~~~~ 98 (468)
T 1hm9_A 35 KVAG-ISMLEHVFRSVGAIQ--PEK--TVTVVGHKAEL----VEEVL----AGQTEFVT---QSEQLGTGHAVMMTEPIL 98 (468)
T ss_dssp EETT-EEHHHHHHHHHHTTC--CSE--EEEEECTTHHH----HHHSS----SSSSEEEE---CSSCCCHHHHHHTTHHHH
T ss_pred EECC-ccHHHHHHHHHHhcC--CCC--EEEEECCCHHH----HHHHh----CCCcEEEe---CCccCChHHHHHHHHHHh
Confidence 4434 368889999988764 223 44443322222 22111 12454442 223335778888777632
Q ss_pred ccCCccEEEEEcCCCC-CCHHHHHHHHHHHcc
Q 041566 320 YVKDYEFVAIFDADFQ-PTPDFLKKTIPYFKG 350 (687)
Q Consensus 320 ~~a~~d~V~~lDaD~~-~~pd~L~~lv~~f~~ 350 (687)
..+.|.++++++|.- ++++.+++++..+.+
T Consensus 99 -~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 129 (468)
T 1hm9_A 99 -EGLSGHTLVIAGDTPLITGESLKNLIDFHIN 129 (468)
T ss_dssp -TTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred -ccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 123689999999994 688999999988764
No 62
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=31.44 E-value=2.9e+02 Score=26.73 Aligned_cols=48 Identities=13% Similarity=0.206 Sum_probs=37.3
Q ss_pred CCCCChHhHHHHHhcccccCCccEEEEEcCCC-CCCHHHHHHHHHHHcc
Q 041566 303 IRSGYKAGNLNSAMGCDYVKDYEFVAIFDADF-QPTPDFLKKTIPYFKG 350 (687)
Q Consensus 303 ~~~ggKa~aLn~gl~~~~~a~~d~V~~lDaD~-~~~pd~L~~lv~~f~~ 350 (687)
+..++-...|+.|++......++-|+++-+|+ .++++.|.+++..+.+
T Consensus 82 q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 82 QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 34556888888888743223567899999999 7799999999988874
No 63
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=31.36 E-value=1.6e+02 Score=28.01 Aligned_cols=79 Identities=11% Similarity=0.061 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCC
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKD 323 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~ 323 (687)
....++.+++.+.+... +|+|+-+. +...+. .++++ . ...|-.+++..|++. .+
T Consensus 31 g~pll~~~l~~l~~~~~-----~ivvv~~~--~~i~~~----------~~~~~-----~-~~~g~~~~i~~a~~~---~~ 84 (232)
T 2dpw_A 31 GRPMVEWVLEALYAAGL-----SPVYVGEN--PGLVPA----------PALTL-----P-DRGGLLENLEQALEH---VE 84 (232)
T ss_dssp TEETHHHHHHHHHHTTC-----EEEEESCC--SSCSSC----------CSEEE-----C-CCSSHHHHHHHHHHT---CC
T ss_pred CEEHHHHHHHHHHhcCC-----EEEEEeCh--HHHhhh----------cCeEe-----c-CCCCHHHHHHHHHHH---cC
Confidence 34578888888877542 45555332 222110 13332 2 233578889888873 33
Q ss_pred ccEEEEEcCCCC-CCHHHHHHHHHHHcc
Q 041566 324 YEFVAIFDADFQ-PTPDFLKKTIPYFKG 350 (687)
Q Consensus 324 ~d~V~~lDaD~~-~~pd~L~~lv~~f~~ 350 (687)
|.++++++|.- ++++.+++++. ...
T Consensus 85 -~~~lv~~~D~P~~~~~~i~~l~~-~~~ 110 (232)
T 2dpw_A 85 -GRVLVATGDIPHLTEEAVRFVLD-KAP 110 (232)
T ss_dssp -SEEEEEETTCTTCCHHHHHHHHH-HCC
T ss_pred -CCEEEEeCCcccCCHHHHHHHHh-cCC
Confidence 89999999994 68999999998 443
No 64
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=30.84 E-value=1.4e+02 Score=29.91 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=54.1
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhc
Q 041566 239 IPMCNEREVYGQSIAAVCIQDWPKERMLVQILDD-SDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMG 317 (687)
Q Consensus 239 IP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD-~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~ 317 (687)
+|.++. ..+..+++.+.... -++ |+|+-. ...+... +.+....+.++++.+...+. ..|-++++..+.+
T Consensus 29 lpi~gk-pli~~~l~~l~~~g--i~~--Iivv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~-~~G~~~al~~a~~ 98 (295)
T 1lvw_A 29 LPIYDK-PMIYYPLSVLMLAG--IRD--ILIISTPRDLPLYR----DLLGDGSQFGVRFSYRVQEE-PRGIADAFIVGKD 98 (295)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCE--EEEEECTTTHHHHH----HHHTTSGGGTSEEEEEECSS-CCCGGGHHHHTHH
T ss_pred cEECCe-eHHHHHHHHHHHCC--CCe--EEEEeccchHHHHH----HHhhhccccCceEEEeeCCC-CCChHHHHHHHHH
Confidence 456664 56777788777653 223 444432 2222222 22221112466766654333 3457888887776
Q ss_pred ccccCCccEEEEEcCCCCCCHHHHHHHHHHHc
Q 041566 318 CDYVKDYEFVAIFDADFQPTPDFLKKTIPYFK 349 (687)
Q Consensus 318 ~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~ 349 (687)
. ..+.+++++. +|.......+.+++..+.
T Consensus 99 ~--i~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 99 F--IGDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp H--HTTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred H--hCCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 3 2345666666 998763356777777774
No 65
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=30.15 E-value=1.4e+02 Score=27.71 Aligned_cols=78 Identities=10% Similarity=0.051 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCcc
Q 041566 246 EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDYE 325 (687)
Q Consensus 246 ~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~d 325 (687)
..++.+++.+.+. .++ |+|+-+.... +. + . +++++. .+....|-.+++..|++. .+.|
T Consensus 41 pll~~~l~~l~~~---~~~--i~vv~~~~~~------~~----~-~-~~~~v~--~~~~~~g~~~~i~~al~~---~~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKE--VYIVAKDREK------FS----F-L-NAPVVL--DEFEESASIIGLYTALKH---AKEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSE--EEEEESCSGG------GG----G-G-TCCEEE--CCCSSCCHHHHHHHHHHH---CSSS
T ss_pred EHHHHHHHHHHHh---CCE--EEEEeCcHHH------hh----c-C-CceEEe--cCCCCCCcHHHHHHHHHH---cCCC
Confidence 4677788877665 223 4444332222 10 1 1 455543 222234588889988873 3578
Q ss_pred EEEEEcCCCC-CCHHHHHH-HH
Q 041566 326 FVAIFDADFQ-PTPDFLKK-TI 345 (687)
Q Consensus 326 ~V~~lDaD~~-~~pd~L~~-lv 345 (687)
.++++++|.- ++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 9999999994 58998988 77
No 66
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=25.85 E-value=2.6e+02 Score=28.56 Aligned_cols=89 Identities=12% Similarity=0.028 Sum_probs=45.4
Q ss_pred cCCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCC-ChHhH-----H
Q 041566 241 MCNER--EVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSG-YKAGN-----L 312 (687)
Q Consensus 241 ~yNE~--~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~g-gKa~a-----L 312 (687)
+.|+. .....++.|+.... +...+.| +++|+-++...+.+++ .+..++.+....... .+... .
T Consensus 10 ~~d~~Yl~~a~vl~~SL~~~~-s~~~l~v-lv~~~is~~~~~~L~~-------~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 10 TTNDAYAKGALVLGSSLKQHR-TSRRLAV-LTTPQVSDTMRKALEI-------VFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT-CCSEEEE-EECTTSCHHHHHHHHH-------HCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred EeCHHHHHHHHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHHH-------hCCEEEEEeecCCcchhhcccccccch
Confidence 45665 55566777887654 3334544 6676655655555542 344454443221111 01000 0
Q ss_pred HHHhc---ccccCCccEEEEEcCCCCCCH
Q 041566 313 NSAMG---CDYVKDYEFVAIFDADFQPTP 338 (687)
Q Consensus 313 n~gl~---~~~~a~~d~V~~lDaD~~~~p 338 (687)
...+. .-...+.|-|+.+|+|+++-.
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~ 109 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLA 109 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECS
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEecc
Confidence 11111 011367899999999997743
No 67
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=24.07 E-value=1.1e+02 Score=30.66 Aligned_cols=98 Identities=9% Similarity=0.086 Sum_probs=52.7
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCC-CChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhc
Q 041566 239 IPMCNEREVYGQSIAAVCIQDWPKERMLVQILDDS-DDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMG 317 (687)
Q Consensus 239 IP~yNE~~~l~~tL~Sl~~q~yP~~~leViVvDD~-s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~ 317 (687)
+|.++. ..+..+++.+.... -++ |+|+-.. ..+...+.+. ...+.++++.+...+ ...|-++++..+.+
T Consensus 28 lpi~gk-pli~~~l~~l~~~g--i~~--I~vv~~~~~~~~i~~~l~----~g~~~g~~i~~~~~~-~~~G~~~al~~a~~ 97 (293)
T 1fxo_A 28 LPVYDK-PMIYYPLSTLMLAG--IRE--ILIISTPQDTPRFQQLLG----DGSNWGLDLQYAVQP-SPDGLAQAFLIGES 97 (293)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCE--EEEEECTTTHHHHHHHHT----TSGGGTCEEEEEECS-SCCCGGGHHHHTHH
T ss_pred CeECCE-eHHHHHHHHHHHCC--CCE--EEEEeccccHHHHHHHHh----cccccCceEEEeeCC-CCCCHHHHHHHHHH
Confidence 455664 56777788777654 223 4444322 2232322222 111246676665433 33457888887776
Q ss_pred ccccCCccEEEEEcCCCCCCHHHHHHHHHHHc
Q 041566 318 CDYVKDYEFVAIFDADFQPTPDFLKKTIPYFK 349 (687)
Q Consensus 318 ~~~~a~~d~V~~lDaD~~~~pd~L~~lv~~f~ 349 (687)
. ..+.+++++. +|....+..+.+++..+.
T Consensus 98 ~--i~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 98 F--IGNDLSALVL-GDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp H--HTTSEEEEEE-TTEEEECTTHHHHHHHHH
T ss_pred H--hCCCCEEEEE-CChhccCccHHHHHHHHH
Confidence 3 2234455554 998653356778887774
No 68
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.88 E-value=2.4e+02 Score=23.84 Aligned_cols=50 Identities=22% Similarity=0.399 Sum_probs=23.1
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEE
Q 041566 244 EREVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYR 299 (687)
Q Consensus 244 E~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~ 299 (687)
..+..++.|+.+-. .||.-.+.|+|..| + .+.++..+++....|+.+..+
T Consensus 60 dkedfrenireiwe-rypqldvvvivttd-d----kewikdfieeakergvevfvv 109 (162)
T 2l82_A 60 DKEDFRENIREIWE-RYPQLDVVVIVTTD-D----KEWIKDFIEEAKERGVEVFVV 109 (162)
T ss_dssp SHHHHHHHHHHHHH-HCTTCCEEEEEECC-C----HHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHH-hCCCCcEEEEEecC-c----HHHHHHHHHHHHhcCcEEEEE
Confidence 33555555555543 36654443333222 1 233444444444566665544
No 69
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=22.77 E-value=1.1e+02 Score=29.14 Aligned_cols=86 Identities=12% Similarity=0.042 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCcEEEEEeccCCCCChHhHHHHHhcccccCCc
Q 041566 245 REVYGQSIAAVCIQDWPKERMLVQILDDSDDLDVQLLIKAEVLKWQQRGVHIIYRHRLIRSGYKAGNLNSAMGCDYVKDY 324 (687)
Q Consensus 245 ~~~l~~tL~Sl~~q~yP~~~leViVvDD~s~d~t~~~l~~~~~~~~~~~v~i~~~~r~~~~ggKa~aLn~gl~~~~~a~~ 324 (687)
...++.+++.+.+. -++ |+|+- ...+...+.+ .+ ..+.++.+........|-.+++..|++. .+
T Consensus 45 ~pli~~~l~~l~~~---~~~--i~vv~-~~~~~~~~~~---~~---~~~~~~~~v~~~~~~~g~~~~i~~a~~~---~~- 108 (232)
T 2xme_A 45 CEIILRTMKLLSPH---VSE--FIIVA-SRYADDIDAF---LK---DKGFNYKIVRHDRPEKGNGYSLLVAKNH---VE- 108 (232)
T ss_dssp EEHHHHHHHHHGGG---EEE--EEEEE-STTHHHHHHH---HT---TSCCCEEEEECSCGGGCHHHHHHTTGGG---CC-
T ss_pred EEHHHHHHHHHHHh---CCE--EEEEe-CChHHHHHHH---HH---hcCCcEEEEECCCCCCCcHHHHHHHHHH---CC-
Confidence 36788888888765 223 34443 3333332221 11 2233444443222223467788888773 23
Q ss_pred cEEEEEcCCCCCCHHHHHHHHH
Q 041566 325 EFVAIFDADFQPTPDFLKKTIP 346 (687)
Q Consensus 325 d~V~~lDaD~~~~pd~L~~lv~ 346 (687)
+.++++.+|...+++.+++++.
T Consensus 109 ~~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 109 DRFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp SSEEEEETTEEECHHHHHHHTT
T ss_pred CCEEEEcCCcccCHHHHHHHHh
Confidence 3456788998778888877764
Done!