BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041572
         (313 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
           GN=At3g12360 PE=2 SV=1
          Length = 590

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 6/135 (4%)

Query: 167 PSSEVSGAALQMQRELQWFKLNDKDKTPREL--FTEEHKGLVKEGEKWMKDTAQSCSLVA 224
           P  E+     Q++ ++   +L    +T + +   ++E + L +EG   + +   S ++VA
Sbjct: 371 PRDELRSTVTQIKNDVH-IQLEQTKRTNKNVHNISKELRKLHREG---INNATNSVTVVA 426

Query: 225 TLVITIAFAAAITVPGDSDSRGMPNYLHEPSFTIFGISNALALFSSVVSVLMFLGILTSR 284
            L  T+AFAA  TVPG  ++ G    +   SF IF I NALALF+S+  V++ + ++   
Sbjct: 427 VLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGE 486

Query: 285 FSEEDFLVSLPRKLI 299
              E  +V +  KL+
Sbjct: 487 TKAEKRVVEVINKLM 501


>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana
           GN=At2g01680 PE=1 SV=1
          Length = 532

 Score = 38.9 bits (89), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 67/279 (24%)

Query: 84  KKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKA 143
           K  + TA ++G+  IV + +I      +   ++ G    H AVK R      ++  + +A
Sbjct: 163 KTSLHTAGRYGLLRIV-KALIEKDAAIVGVKDKKGQTALHMAVKGRS---LEVVEEILQA 218

Query: 144 QTFFVADIDVKGVNILHSAARSV-----------PSSEVSG------AALQMQRELQW-- 184
               + + D KG   LH A R              + EV+        A+ +  +LQ+  
Sbjct: 219 DYTILNERDRKGNTALHIATRKARPQITSLLLTFTAIEVNAINNQKETAMDLADKLQYSE 278

Query: 185 --FKLND-----------------------------KDKTPRELFTEEH-----KGLVKE 208
              ++N+                             K +   +L   E       G+ KE
Sbjct: 279 SALEINEALVEAGAKHGRFIGREDEARALKRAVSDIKHEVQSQLLQNEKTNRRVSGIAKE 338

Query: 209 GEKW----MKDTAQSCSLVATLVITIAFAAAITVPG----DSDSRGMPNYLHEPSFTIFG 260
             K     +++T  S ++VA L  +IAF A   +PG    +    G  N      F +F 
Sbjct: 339 LRKLHREAVQNTTNSITVVAVLFASIAFLAIFNLPGQYFTEGSHVGQANIAGRTGFRVFC 398

Query: 261 ISNALALFSSVVSVLMFLGILTSRFSEEDFLVSLPRKLI 299
           + NA +LF S+  V++ + ++      +  +VS+  KL+
Sbjct: 399 LLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKLM 437


>sp|A1S7U2|GLMM2_SHEAM Phosphoglucosamine mutase 2 OS=Shewanella amazonensis (strain ATCC
           BAA-1098 / SB2B) GN=glmM2 PE=3 SV=1
          Length = 452

 Score = 37.0 bits (84), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 28/220 (12%)

Query: 29  GLYISYFYLNPYYPPSIKSIRNT--KLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86
           G+ IS  + NPYY   IK   NT  KLT +Q LEI R++ V A++         + L K 
Sbjct: 95  GVVISASH-NPYYDNGIKFFSNTGTKLTDEQELEIERLL-VSAIEGGAMTCVASDKLGKV 152

Query: 87  MFTAAKFGIYEIVMEIIISYFPWSLSFSN-EDGDDIFHAAVKHRQENVFNIIFNMPKAQT 145
                  G Y   +E     FP SLS +  +   D  H A  H  +NV+  +     A+ 
Sbjct: 153 RRINDAAGRY---IEFCKGTFPNSLSLTGLKIVVDSAHGAAYHIAKNVYREL----GAEV 205

Query: 146 FFVADIDVKGVNI-LHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHKG 204
             + D    G+NI  H  A  + S +   A +  + +L      D D+    L   + KG
Sbjct: 206 ISIND-KPDGININEHCGATHMDSLQT--AVMIHEADLGIALDGDADR----LMMVDSKG 258

Query: 205 LVKEGEKWMKDTAQSC--------SLVATLVITIAFAAAI 236
            V +G+  +   A+S          ++ TL+  + F  A+
Sbjct: 259 QVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQAL 298


>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana
           GN=At5g02620 PE=1 SV=1
          Length = 524

 Score = 35.8 bits (81), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 36/136 (26%)

Query: 163 ARSV-PSSEV--SGAALQMQRELQWF------KLNDKDKTPRELFTEEHKGLVKEGEKW- 212
           ARS+ P+ +V  SG++ +++  +         +L    +T RE+     +G+ K   K  
Sbjct: 288 ARSIKPAEKVEPSGSSRKLKETVSEIGHEVHTQLEQTGRTRREI-----QGIAKRVNKMH 342

Query: 213 ---MKDTAQSCSLVATLVITIAFAAAITVPGD--------------SDSRGMPNYLHEPS 255
              + +   S +LVA L+ T+AFAA   VPG                ++R  P     P 
Sbjct: 343 TEGLNNAINSTTLVAILIATVAFAAIFNVPGQYTDDPKDVPPGYSLGEARAAP----RPE 398

Query: 256 FTIFGISNALALFSSV 271
           F IF + ++ ALF S+
Sbjct: 399 FLIFVVFDSFALFISL 414


>sp|Q89KR6|SYQ_BRAJA Glutamine--tRNA ligase OS=Bradyrhizobium japonicum (strain USDA
           110) GN=glnS PE=3 SV=1
          Length = 558

 Score = 35.8 bits (81), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 9/104 (8%)

Query: 99  VMEIIISYFPWSLSFSNEDGDDI---FH----AAVKHRQENVFNIIFNMPKAQ-TFFVAD 150
           V+E+  +Y P +   +  DG  +    H    AA K  +  ++N +F  P    + F AD
Sbjct: 434 VVELRCTYDPATRGGNAPDGRKVKATMHWLSAAASKPAEIRIYNQLFANPSPDASNFAAD 493

Query: 151 IDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTP 194
           ++ + + IL S AR   S   S +   MQ E Q + + DKD TP
Sbjct: 494 LNPQSLEIL-SNARVEASVAESNSTEPMQFERQGYFVRDKDSTP 536


>sp|P12298|GLGL1_WHEAT Glucose-1-phosphate adenylyltransferase large subunit (Fragment)
           OS=Triticum aestivum GN=AGA.1 PE=2 SV=1
          Length = 301

 Score = 35.4 bits (80), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 19/115 (16%)

Query: 77  KETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNI 136
           KE E   KKP    A  G+Y    EI+++   W    +N+ G +I  AA   R+ NV   
Sbjct: 68  KEMEEAEKKPYI--ASMGVYIFKKEILLNLLRWRFPTANDFGSEIIPAAA--REINVKAY 123

Query: 137 IFN-----MPKAQTFFVADIDV----------KGVNILHSAARSVPSSEVSGAAL 176
           +FN     +   ++FF A++ +               ++++ R++P S +SG+ +
Sbjct: 124 LFNDYWEDIGTIKSFFEANLALAEQPSKFSFYDASKPMYTSRRNLPPSMISGSKI 178


>sp|Q24145|SHARK_DROME Tyrosine-protein kinase shark OS=Drosophila melanogaster GN=shark
           PE=2 SV=2
          Length = 939

 Score = 33.5 bits (75), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 115 NEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSS 169
           N+DG    H A  H  E++   + N  K Q   V   D  G   LH AARS P+S
Sbjct: 151 NQDGQTALHLAALHSDEDILKHLLNA-KVQ---VNSSDSFGCQPLHYAARSKPAS 201


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,736,248
Number of Sequences: 539616
Number of extensions: 4415811
Number of successful extensions: 10632
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10629
Number of HSP's gapped (non-prelim): 12
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)