Query 041572
Match_columns 313
No_of_seqs 393 out of 2889
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 14:22:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b93_B Ankyrin repeat domain-c 99.9 4.3E-24 1.5E-28 190.7 9.5 181 7-202 45-229 (269)
2 1yyh_A HN1;, notch 1, ankyrin 99.9 4.4E-24 1.5E-28 188.1 8.9 179 10-203 53-235 (253)
3 4gpm_A Engineered protein OR26 99.9 1.1E-23 3.8E-28 175.3 10.8 130 60-202 18-147 (169)
4 1oy3_D Transcription factor in 99.9 2.6E-24 8.9E-29 191.0 6.0 115 79-202 154-269 (282)
5 3twr_A Tankyrase-2; ankyrin re 99.9 4.5E-24 1.5E-28 175.5 6.4 154 9-206 3-156 (165)
6 2rfm_A Putative ankyrin repeat 99.9 1.6E-23 5.4E-28 176.7 9.9 149 9-202 30-178 (192)
7 3aji_A 26S proteasome non-ATPa 99.9 1.1E-23 3.8E-28 182.1 9.1 180 8-203 34-217 (231)
8 4gpm_A Engineered protein OR26 99.9 2.5E-23 8.4E-28 173.2 10.4 107 60-177 51-157 (169)
9 2f8y_A Notch homolog 1, transl 99.9 2.8E-23 9.7E-28 178.5 10.6 179 10-203 21-203 (223)
10 1k1a_A B-cell lymphoma 3-encod 99.9 2E-23 6.8E-28 181.3 9.7 181 9-201 41-226 (241)
11 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-23 6.2E-28 184.1 9.5 182 8-201 4-200 (253)
12 2dzn_A Probable 26S proteasome 99.9 2.4E-23 8.4E-28 179.4 10.0 180 9-201 31-218 (228)
13 3b7b_A Euchromatic histone-lys 99.9 4.4E-23 1.5E-27 179.0 11.7 152 5-168 2-157 (237)
14 2rfa_A Transient receptor pote 99.9 3E-23 1E-27 179.6 10.5 180 13-202 2-208 (232)
15 3b7b_A Euchromatic histone-lys 99.9 4.5E-23 1.5E-27 178.9 10.4 182 7-203 37-222 (237)
16 2etb_A Transient receptor pote 99.9 9E-23 3.1E-27 179.5 11.0 155 10-203 39-233 (256)
17 1ikn_D Protein (I-kappa-B-alph 99.9 8.1E-23 2.8E-27 177.7 10.6 178 10-202 4-195 (236)
18 3v31_A Ankyrin repeat family A 99.9 6E-23 2.1E-27 169.0 9.2 145 13-202 2-146 (167)
19 2xai_A ASB-9, ankyrin repeat a 99.9 6.2E-23 2.1E-27 181.6 9.0 177 7-201 29-209 (261)
20 1oy3_D Transcription factor in 99.9 5.1E-23 1.7E-27 182.7 8.4 180 8-202 3-236 (282)
21 1ikn_D Protein (I-kappa-B-alph 99.9 5.3E-23 1.8E-27 178.9 7.3 185 6-201 37-229 (236)
22 3f6q_A Integrin-linked protein 99.9 1.6E-22 5.5E-27 168.6 9.2 132 60-203 19-150 (179)
23 3jxi_A Vanilloid receptor-rela 99.9 2E-22 6.8E-27 177.6 10.1 118 79-202 89-236 (260)
24 3v30_A DNA-binding protein rfx 99.9 2.7E-22 9.2E-27 166.0 10.3 130 61-202 17-146 (172)
25 2pnn_A Transient receptor pote 99.9 1.4E-22 4.8E-27 180.1 9.1 187 9-202 8-244 (273)
26 1awc_B Protein (GA binding pro 99.9 1.3E-22 4.4E-27 164.9 7.4 130 60-203 16-145 (153)
27 2dzn_A Probable 26S proteasome 99.9 1.7E-22 6E-27 174.0 8.2 178 14-202 2-185 (228)
28 3hra_A Ankyrin repeat family p 99.9 3.3E-22 1.1E-26 169.1 9.7 179 12-203 3-190 (201)
29 1s70_B 130 kDa myosin-binding 99.9 1.2E-22 4E-27 182.3 6.8 85 115-206 196-280 (299)
30 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-22 8.3E-27 180.4 8.9 148 7-168 52-203 (285)
31 1k1a_A B-cell lymphoma 3-encod 99.9 4.1E-22 1.4E-26 173.0 9.8 182 9-202 4-194 (241)
32 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.4E-22 8.3E-27 166.2 7.8 131 60-203 28-158 (169)
33 1n11_A Ankyrin; clathrin, BAND 99.9 4.3E-22 1.5E-26 188.4 10.5 114 79-201 274-387 (437)
34 3utm_A Tankyrase-1; tankyrase, 99.9 5.8E-22 2E-26 180.9 10.5 118 81-207 209-329 (351)
35 3ljn_A Hypothetical protein; a 99.9 2.2E-22 7.4E-27 186.2 7.1 185 7-202 46-255 (364)
36 4hbd_A KN motif and ankyrin re 99.9 3.8E-22 1.3E-26 178.5 8.3 152 8-202 105-261 (276)
37 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.6E-22 8.9E-27 163.2 6.1 129 60-202 16-144 (156)
38 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-21 4E-26 175.9 10.6 176 7-200 85-264 (285)
39 3v30_A DNA-binding protein rfx 99.9 1E-21 3.5E-26 162.5 9.2 165 14-194 2-171 (172)
40 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.1E-22 1.1E-26 163.7 5.6 130 60-202 19-148 (162)
41 2xai_A ASB-9, ankyrin repeat a 99.9 8.7E-22 3E-26 174.2 8.9 172 13-202 2-177 (261)
42 1sw6_A Regulatory protein SWI6 99.9 2.3E-22 7.8E-27 184.2 4.9 151 10-200 127-325 (327)
43 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-21 3.9E-26 156.3 8.3 116 78-202 5-120 (137)
44 1d9s_A Cyclin-dependent kinase 99.8 6.3E-22 2.2E-26 157.9 6.6 121 5-168 3-124 (136)
45 1wdy_A 2-5A-dependent ribonucl 99.8 2E-21 7E-26 172.0 10.5 176 11-201 36-229 (285)
46 2fo1_E LIN-12 protein; beta-ba 99.8 7.9E-22 2.7E-26 183.8 6.8 185 7-203 159-358 (373)
47 1bi7_B P16INK4A, MTS1, multipl 99.8 3.5E-22 1.2E-26 163.1 3.7 145 7-197 5-150 (156)
48 2vge_A RELA-associated inhibit 99.8 8.7E-22 3E-26 171.6 6.2 99 60-168 35-136 (229)
49 1ycs_B 53BP2, P53BP2; ankyrin 99.8 5.4E-21 1.9E-25 167.1 11.0 178 11-203 2-193 (239)
50 3c5r_A BARD-1, BRCA1-associate 99.8 2.3E-21 7.9E-26 154.5 7.3 118 9-168 5-122 (137)
51 3kea_A K1L; tropism, ANK repea 99.8 2.4E-21 8.1E-26 174.0 8.1 177 6-202 23-206 (285)
52 4b93_B Ankyrin repeat domain-c 99.8 2E-21 7E-26 173.3 7.5 178 9-202 6-196 (269)
53 1n11_A Ankyrin; clathrin, BAND 99.8 6.5E-21 2.2E-25 180.3 10.7 114 79-201 241-354 (437)
54 3aji_A 26S proteasome non-ATPa 99.8 6.2E-21 2.1E-25 164.7 9.6 178 10-202 2-183 (231)
55 3eu9_A Huntingtin-interacting 99.8 1.6E-20 5.5E-25 162.2 11.7 183 6-202 1-188 (240)
56 3utm_A Tankyrase-1; tankyrase, 99.8 1E-20 3.5E-25 172.6 10.9 179 7-201 51-290 (351)
57 3aaa_C Myotrophin, protein V-1 99.8 6.1E-21 2.1E-25 149.3 7.8 112 80-200 4-115 (123)
58 3hra_A Ankyrin repeat family p 99.8 8.1E-21 2.8E-25 160.5 9.2 152 6-168 31-191 (201)
59 1awc_B Protein (GA binding pro 99.8 1.8E-20 6.2E-25 152.2 10.7 99 60-168 48-146 (153)
60 2jab_A H10-2-G3; HER2, darpin, 99.8 6E-21 2.1E-25 152.2 6.8 97 62-168 30-126 (136)
61 3eu9_A Huntingtin-interacting 99.8 1.6E-20 5.5E-25 162.1 9.6 181 7-203 35-222 (240)
62 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.8E-20 9.4E-25 152.0 10.4 101 59-168 50-150 (162)
63 1wdy_A 2-5A-dependent ribonucl 99.8 2.5E-20 8.7E-25 164.9 10.9 84 80-168 145-232 (285)
64 3v31_A Ankyrin repeat family A 99.8 3.3E-20 1.1E-24 152.5 10.8 120 7-168 29-148 (167)
65 3ui2_A Signal recognition part 99.8 9E-21 3.1E-25 166.5 7.8 112 60-202 59-171 (244)
66 3deo_A Signal recognition part 99.8 7E-21 2.4E-25 159.6 6.3 97 60-167 58-155 (183)
67 3aaa_C Myotrophin, protein V-1 99.8 1.1E-20 3.9E-25 147.8 7.0 95 61-165 22-116 (123)
68 2rfm_A Putative ankyrin repeat 99.8 3.5E-20 1.2E-24 156.0 10.4 120 7-168 61-180 (192)
69 1d9s_A Cyclin-dependent kinase 99.8 4.2E-21 1.4E-25 153.1 4.5 116 77-202 6-122 (136)
70 2rfa_A Transient receptor pote 99.8 2.7E-20 9.3E-25 160.9 9.6 164 7-177 30-218 (232)
71 2y1l_E Darpin-8.4; hydrolase-i 99.8 5.5E-20 1.9E-24 151.9 10.5 148 8-168 8-159 (169)
72 1bd8_A P19INK4D CDK4/6 inhibit 99.8 8.7E-20 3E-24 148.2 11.1 98 60-168 49-146 (156)
73 2jab_A H10-2-G3; HER2, darpin, 99.8 1.8E-20 6.1E-25 149.4 6.7 116 79-203 10-125 (136)
74 3ljn_A Hypothetical protein; a 99.8 4.4E-21 1.5E-25 177.3 3.1 180 8-202 14-222 (364)
75 2f8y_A Notch homolog 1, transl 99.8 7.4E-20 2.5E-24 157.1 10.5 149 7-168 51-204 (223)
76 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.3E-20 1.5E-24 143.8 8.2 97 62-168 18-114 (126)
77 4g8k_A 2-5A-dependent ribonucl 99.8 8.2E-20 2.8E-24 167.0 11.1 135 60-202 139-284 (337)
78 1s70_B 130 kDa myosin-binding 99.8 3.5E-20 1.2E-24 166.2 8.1 99 60-168 54-152 (299)
79 3twr_A Tankyrase-2; ankyrin re 99.8 1.1E-19 3.6E-24 149.2 10.2 119 7-168 35-153 (165)
80 1n0q_A 3ANK, 3 ankyrin repeats 99.8 8.1E-20 2.8E-24 136.0 8.6 81 82-168 1-81 (93)
81 2fo1_E LIN-12 protein; beta-ba 99.8 2.6E-20 8.8E-25 173.5 7.3 85 79-166 162-246 (373)
82 3t8k_A Uncharacterized protein 99.8 3.7E-20 1.3E-24 156.3 7.1 116 81-203 36-166 (186)
83 3f6q_A Integrin-linked protein 99.8 4E-20 1.4E-24 154.1 7.0 145 12-168 3-151 (179)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.5E-19 5.2E-24 140.7 9.1 112 82-202 1-112 (126)
85 2etb_A Transient receptor pote 99.8 7.9E-20 2.7E-24 160.6 8.2 125 10-177 86-242 (256)
86 4hbd_A KN motif and ankyrin re 99.8 3.7E-19 1.3E-23 159.0 11.9 125 7-168 138-263 (276)
87 3jxi_A Vanilloid receptor-rela 99.8 9.1E-20 3.1E-24 160.5 7.8 128 7-177 86-246 (260)
88 3ehr_A Osteoclast-stimulating 99.8 7.3E-20 2.5E-24 157.7 6.8 116 78-202 68-184 (222)
89 3t8k_A Uncharacterized protein 99.8 4.6E-20 1.6E-24 155.7 4.6 100 59-168 55-167 (186)
90 2pnn_A Transient receptor pote 99.8 1.5E-19 5E-24 160.5 8.0 148 9-168 49-246 (273)
91 2vge_A RELA-associated inhibit 99.8 1.2E-19 4.1E-24 158.0 7.2 126 63-198 2-128 (229)
92 3deo_A Signal recognition part 99.8 1.8E-19 6.1E-24 151.0 7.2 115 79-203 40-155 (183)
93 2l6b_A NR1C; ankyrin, consensu 99.8 2.1E-19 7.2E-24 138.7 7.0 109 78-195 4-112 (115)
94 1bi7_B P16INK4A, MTS1, multipl 99.8 1.2E-19 4.2E-24 147.9 5.4 114 79-202 8-122 (156)
95 3ehr_A Osteoclast-stimulating 99.8 1.2E-19 4E-24 156.4 5.2 100 60-168 87-186 (222)
96 2b0o_E UPLC1; arfgap, structur 99.8 6.7E-19 2.3E-23 159.6 9.2 127 60-202 165-297 (301)
97 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.1E-19 1.1E-23 155.9 6.0 125 60-198 19-144 (239)
98 3kea_A K1L; tropism, ANK repea 99.8 1.8E-18 6.2E-23 155.1 10.3 80 83-168 62-142 (285)
99 3jue_A Arfgap with coiled-coil 99.8 7.9E-19 2.7E-23 163.4 8.0 131 60-201 214-347 (368)
100 1sw6_A Regulatory protein SWI6 99.7 8.9E-19 3E-23 160.3 7.2 100 60-168 111-218 (327)
101 4g8k_A 2-5A-dependent ribonucl 99.7 1.1E-18 3.9E-23 159.4 7.1 152 9-178 163-323 (337)
102 3ui2_A Signal recognition part 99.7 1.3E-18 4.3E-23 152.8 7.0 114 79-202 41-155 (244)
103 2zgd_A 3 repeat synthetic anky 99.7 7.4E-18 2.5E-22 129.5 8.2 84 79-168 20-103 (110)
104 1dcq_A PYK2-associated protein 99.7 7.2E-18 2.4E-22 151.1 9.1 84 79-168 165-251 (278)
105 2l6b_A NR1C; ankyrin, consensu 99.7 5E-18 1.7E-22 130.9 5.0 108 9-158 4-111 (115)
106 2b0o_E UPLC1; arfgap, structur 99.7 1.2E-17 4E-22 151.4 5.7 114 10-168 186-299 (301)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.7 4.2E-17 1.4E-21 121.1 7.3 76 60-141 16-91 (93)
108 3lvq_E ARF-GAP with SH3 domain 99.7 4.9E-17 1.7E-21 157.1 9.3 102 60-168 146-253 (497)
109 3jue_A Arfgap with coiled-coil 99.6 1.3E-16 4.6E-21 148.4 6.6 115 79-202 195-312 (368)
110 2aja_A Ankyrin repeat family p 99.6 3.8E-18 1.3E-22 159.3 -4.0 101 60-168 106-212 (376)
111 3lvq_E ARF-GAP with SH3 domain 99.6 2.5E-16 8.5E-21 152.2 5.8 110 84-202 133-251 (497)
112 1dcq_A PYK2-associated protein 99.6 8.5E-16 2.9E-20 137.5 7.9 113 83-203 130-250 (278)
113 2zgd_A 3 repeat synthetic anky 99.5 9.5E-15 3.2E-19 111.9 5.9 90 10-137 20-109 (110)
114 2aja_A Ankyrin repeat family p 99.5 7.1E-16 2.4E-20 143.9 -1.2 154 9-181 87-250 (376)
115 1gp8_A Protein (scaffolding pr 32.6 29 0.00098 20.4 2.1 20 86-105 16-35 (40)
No 1
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=4.3e-24 Score=190.71 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=123.3
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+...+.+|.|||+.++..+.... +...++..+..+...+-.+.+..|.++. ++++.|++. ..+. ..++.+
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~--~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~---~~~~~~ 118 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQK--RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKH-GANA---GARNAD 118 (269)
T ss_dssp --------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHT-TCCT---TCCCTT
T ss_pred ccccCccCCCHHHHHHHhCCHHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCc---CccCCC
Confidence 35567889999999987665432 1233445555544445555666777665 789999988 3333 447889
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|.||+|+|+..|+.++++.|++. +.+++.+|..|+||||+||..|+.+++++|++.| +++|.+|.+|+||||+|
T Consensus 119 g~t~l~~a~~~~~~~~~~~Ll~~--g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g----advn~~~~~g~t~Lh~A 192 (269)
T 4b93_B 119 QAVPLHLACQQGHFQVVKCLLDS--NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHG----ASINASNNKGNTALHEA 192 (269)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT----CCTTCBCTTSCBHHHHH
T ss_pred CCCccccccccChHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC----CCCCccccCCCcHHHHH
Confidence 99999999999999999999998 8889999999999999999999999999999998 78999999999999999
Q ss_pred HhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 163 ARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 163 a~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+..|+. .+...+++...+ ....|++|+||+++|.++.
T Consensus 193 ~~~g~~-~~v~~Ll~~Gad--~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 193 VIEKHV-FVVELLLLHGAS--VQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHTTCH-HHHHHHHHTTCC--SCCCCTTSCCSGGGSCTTC
T ss_pred HHcCCH-HHHHHHHHCCCC--CCCcCCCCCCHHHHHHhCC
Confidence 999987 444455544333 3344999999999997654
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.90 E-value=4.4e-24 Score=188.08 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=141.3
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCc
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKK 85 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~t 85 (313)
.|.+|.||||.|+..+.... ..++++.+..+...+....+..|.++. ++++.|++++... .+.+|..|.|
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t 126 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDA---AKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---LDARMHDGTT 126 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHH---HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC---TTCCCTTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCCc
Confidence 47899999999999987765 233334444444444455566666654 7899999883212 3447889999
Q ss_pred HHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhc
Q 041572 86 PMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 86 pLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
|||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.| +++|.+|.+|+||||+|++.
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 127 PLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG----ANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp HHHHHHHHTCSSHHHHHHHT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHC
Confidence 99999999999999999998 8889999999999999999999999999999998 78999999999999999999
Q ss_pred CCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 166 VPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 166 ~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|+. .+...+++...+ ....|..|+||+++|.++..
T Consensus 201 ~~~-~~v~~Ll~~ga~--~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 201 GSY-ETAKVLLDHFAN--RDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp TCH-HHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTC
T ss_pred CCH-HHHHHHHHcCCC--ccccccCCCCHHHHHHHcCC
Confidence 987 344444443333 33348999999999988654
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=1.1e-23 Score=175.35 Aligned_cols=130 Identities=19% Similarity=0.216 Sum_probs=111.6
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|++++ .++ +.+|.+|+||||+|+..|+.++++.|++. +.+++.+|.+|+||||+|+.+|+.+++++|++
T Consensus 18 ~~v~~Ll~~G-adv---n~~d~~g~t~l~~a~~~~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 91 (169)
T 4gpm_A 18 DRVKDLIENG-ADV---NASDSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 91 (169)
T ss_dssp HHHHHHHHTT-CCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCC-CCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6789999983 443 45889999999999999999999999998 88899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.| +++|.+|.+|+||||+|++.|+. .+...+++... +....|++|+||+++|.+..
T Consensus 92 ~g----advn~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~ga--d~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 92 KG----ADVNAKDSDGRTPLHHAAENGHK-EVVKLLISKGA--DVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTT
T ss_pred Cc----CCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCC--CccccCCCCCCHHHHHHHcC
Confidence 98 78999999999999999999987 34444444333 33444999999999998764
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=2.6e-24 Score=191.02 Aligned_cols=115 Identities=13% Similarity=-0.009 Sum_probs=64.2
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccC-CCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNE-DGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN 157 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 157 (313)
+|..|.||||+|+..|+.++++.|++. +..++.++. .|+||||+|+.+|+.+++++|++.| +++|.+|.+|+|
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g----ad~~~~d~~g~t 227 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDA--GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG----ADPTARMYGGRT 227 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCC
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC----CCCcccccCCCC
Confidence 456677777777777777777777776 556666664 3777777777777777777777766 566777777777
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|||+|++.|+. .+...+++...+ ....|++|.||++.+....
T Consensus 228 pL~~A~~~~~~-~~v~~Ll~~ga~--~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 228 PLGSALLRPNP-ILARLLRAHGAP--EPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHTSSCH-HHHHHHHHTTCC--CCCCC--------------
T ss_pred HHHHHHHcCCc-HHHHHHHHcCCC--cCcCCCcccccccccCCcc
Confidence 77777777665 233333332222 2233667777777766544
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=4.5e-24 Score=175.50 Aligned_cols=154 Identities=17% Similarity=0.142 Sum_probs=120.0
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
..|.+|+|+|+.|++.+.... ++.|++.+.... +..+..|+||||
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~--------------------------------v~~ll~~~~~~~---~~~~~~g~t~L~ 47 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVET--------------------------------VKKLCTVQSVNC---RDIEGRQSTPLH 47 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHH--------------------------------HHHHCCTTTTTC---CCTTTTCCCHHH
T ss_pred CCcchhhHHHHHHHHhCCHHH--------------------------------HHHHHHcCCCCc---cccccCCCCHHH
Confidence 356777888888876654433 677766522122 236778999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ +++|.+|.+|+||||+|+..|+.
T Consensus 48 ~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~ 121 (165)
T 3twr_A 48 FAAGYNRVSVVEYLLQH--GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG----AVVNVADLWKFTPLHEAAAKGKY 121 (165)
T ss_dssp HHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHcChHHHHHHHHhc--CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC----CCCCCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999998 7889999999999999999999999999999998 78999999999999999999987
Q ss_pred CCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhhhhh
Q 041572 169 SEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHKGLV 206 (313)
Q Consensus 169 ~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~~l~ 206 (313)
.+...+++.. ......|.+|.||+++|.+.+.++.
T Consensus 122 -~~v~~Ll~~g--a~~~~~~~~g~t~l~~a~~~~~~i~ 156 (165)
T 3twr_A 122 -EICKLLLQHG--ADPTKKNRDGNTPLDLVKDGDTDIQ 156 (165)
T ss_dssp -HHHHHHHHTT--CCTTCCCTTSCCTGGGSCTTCHHHH
T ss_pred -HHHHHHHHcC--CCCcccCCCCCChhHhHhcCChHHH
Confidence 3434444432 2334459999999999987555443
No 6
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=1.6e-23 Score=176.65 Aligned_cols=149 Identities=9% Similarity=-0.005 Sum_probs=122.0
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
.+|.+|.||||.|+..+.... ++.|+++ ...+ +.+|..|+||||
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~--------------------------------v~~Ll~~-~~~~---~~~~~~g~t~L~ 73 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENA--------------------------------IDKLVEN-FDKL---EDKDIEGSTALI 73 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGG--------------------------------HHHHHHH-HCCT---TCCCTTSCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHH--------------------------------HHHHHHh-cccc---ccccccCccHHH
Confidence 467788888888887654433 7777777 3333 347788999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.
T Consensus 74 ~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~ 147 (192)
T 2rfm_A 74 WAVKNNRLGIAEKLLSK--GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG----ANVNDRNLEGETPLIVASKYGRS 147 (192)
T ss_dssp HHHHTTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCSSCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHcCCH
Confidence 99999999999999999 7788999999999999999999999999999998 78999999999999999999987
Q ss_pred CCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 169 SEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 169 ~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.+...+++.. ......|..|.||+++|....
T Consensus 148 -~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 148 -EIVKKLLELG--ADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp -HHHHHHHHTT--CCTTCBCTTSCBHHHHHHHTT
T ss_pred -HHHHHHHHCC--CCCCCcCCCCCCHHHHHHHhC
Confidence 3333444332 233444889999999998764
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=1.1e-23 Score=182.06 Aligned_cols=180 Identities=15% Similarity=0.064 Sum_probs=133.3
Q ss_pred CCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCC
Q 041572 8 HSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVL 83 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g 83 (313)
...|.+|.||||.|+..+.... ..++++.+..+..++....+..|.++. ++++.|+++ ..+. +.+|..|
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~---~~~~~~g 106 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEI---VEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK-GAHV---NAVNQNG 106 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHH---HHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCT---TCCCTTS
T ss_pred hcCCCCCCCHHHHHHHcCcHHH---HHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHc-CCCC---CCCCCCC
Confidence 3457889999999998886655 222233333333333344455555543 788888888 3433 3467889
Q ss_pred CcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHH
Q 041572 84 KKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAA 163 (313)
Q Consensus 84 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa 163 (313)
.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ +++|.+|.+|+||||+|+
T Consensus 107 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 107 CTPLHYAASKNRHEIAVMLLEG--GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK----ASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCSCCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC----CCccccCCCCCCHHHHHH
Confidence 9999999999999999999988 7788888999999999999999999999999988 688899999999999999
Q ss_pred hcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 164 RSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 164 ~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
..++. .+...+++... .....|..|+||+++|.+.+.
T Consensus 181 ~~~~~-~~v~~Ll~~ga--~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 181 DEERV-EEAKFLVTQGA--SIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HTTCH-HHHHHHHHTTC--CSCCCCTTSCCHHHHSCHHHH
T ss_pred HCCCH-HHHHHHHHCCC--CCCCCCCCCCCHHHHHHhhHH
Confidence 99886 33334443322 233448899999999976544
No 8
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=2.5e-23 Score=173.24 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=93.0
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.++++ ..++ +.+|.+|+||||+||+.|+.++++.|++. +.+++.+|.+|+||||+|+..|+.+++++|++
T Consensus 51 ~~~~~ll~~-gad~---~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 51 EVVKLLISK-GADV---NAKDSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp HHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhc-ccch---hhhccCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 347777877 3333 44789999999999999999999999998 88899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQ 177 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~ 177 (313)
.+ ++++.+|.+|+||||+|++.|+. .+...+++
T Consensus 125 ~g----ad~~~~d~~G~TpL~~A~~~g~~-~iv~~Ll~ 157 (169)
T 4gpm_A 125 KG----ADVNTSDSDGRTPLDLAREHGNE-EVVKLLEK 157 (169)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHT
T ss_pred cC----CCccccCCCCCCHHHHHHHcCCH-HHHHHHHH
Confidence 98 78999999999999999999987 34344443
No 9
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.89 E-value=2.8e-23 Score=178.54 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=139.0
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCc
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKK 85 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~t 85 (313)
.|.+|.||||.|++.+.... ..++++.+..+...+....+..|.++. ++++.|++++... .+.++..|.|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t 94 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDA---AKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---LDARMHDGTT 94 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHH---HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC---TTCCCTTCCC
T ss_pred cCCCCCchHHHHHHcCCHHH---HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCc
Confidence 47899999999999988765 233334443333334444555566553 8899999883112 2347889999
Q ss_pred HHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhc
Q 041572 86 PMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 86 pLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
|||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|++.
T Consensus 95 ~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 95 PLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG----ANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHc--CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCcCHHHHHHHc
Confidence 99999999999999999998 7888999999999999999999999999999998 78899999999999999999
Q ss_pred CCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 166 VPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 166 ~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|+. .+...+++...+ ....|..|.||+++|.+...
T Consensus 169 ~~~-~~v~~Ll~~ga~--~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 169 GSY-ETAKVLLDHFAN--RDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp TCH-HHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTC
T ss_pred CCH-HHHHHHHHcCCC--CccccccCCCHHHHHHHhcc
Confidence 987 333344443322 33348899999999987653
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.89 E-value=2e-23 Score=181.28 Aligned_cols=181 Identities=12% Similarity=0.019 Sum_probs=97.9
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCC
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLK 84 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~ 84 (313)
..|.+|.||||.|+..+.... ..++++.+..+...+....+..|.++. ++++.|++.+....-+.+.+|..|.
T Consensus 41 ~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 41 IYNNLRQTPLHLAVITTLPSV---VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHH---HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred cccccCCCHHHHHHHcCCHHH---HHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCC
Confidence 345555666666655554433 111222222222222222333333332 5566665552110002233556677
Q ss_pred cHHHHHHHhCcHHHHHHHHHhhCCCCccccc-CCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHH
Q 041572 85 KPMFTAAKFGIYEIVMEIIISYFPWSLSFSN-EDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAA 163 (313)
Q Consensus 85 tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa 163 (313)
||||+|+..|+.++++.|++. +..++.+| ..|+||||+|+.+|+.+++++|++.+ +++|.+|.+|+||||+|+
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~ 191 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLER--GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG----ANVNAQMYSGSSALHSAS 191 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCBCTTSCBHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHc--CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHH
Confidence 777777777777777777766 55556666 56777777777777777777777766 566677777777777777
Q ss_pred hcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 164 RSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 164 ~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
..|+. .+...+++... .....|..|+||+++|.+.
T Consensus 192 ~~~~~-~~v~~Ll~~ga--~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 192 GRGLL-PLVRTLVRSGA--DSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp HHTCH-HHHHHHHHTTC--CTTCCCTTSCCTTTTCSSH
T ss_pred HcCCH-HHHHHHHhcCC--CCCCcCCCCCCHHHHHHhc
Confidence 77665 23233333222 2223366777777777654
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=1.8e-23 Score=184.13 Aligned_cols=182 Identities=15% Similarity=0.078 Sum_probs=91.6
Q ss_pred CCCCCCCCccccccccCCCcch----------hhhhhhccCCCCCchh-HhhhhhccccHHHH----HHHHHHHhccccc
Q 041572 8 HSENADGDLEKQLSETSPFAFG----------LYISYFYLNPYYPPSI-KSIRNTKLTHKQTL----EILRIICVGAVDI 72 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~----------~~~~~~~l~~~~~~~~-~~~~~~k~~~~~~~----~il~~l~~~~~~~ 72 (313)
-.+|.+|.||||.|+.+|.... ..+...++..+..... .+..+.+..|.++. ++++.|++++ .+
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~ 82 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-AD 82 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 4578999999999999873211 1111222222221111 12233344455443 6777777762 32
Q ss_pred cchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCccccccccccc
Q 041572 73 ATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADID 152 (313)
Q Consensus 73 ~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d 152 (313)
. +.+|..|+||||+|+..|+.++++.|++. .+..++.+|..|+||||+|+..|+.+++++|++.+ +++|.+|
T Consensus 83 ~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~d 154 (253)
T 1yyh_A 83 A---NIQDNMGRTPLHAAVSADAQGVFQILIRN-RATDLDARMHDGTTPLILAARLAVEGMLEDLINSH----ADVNAVD 154 (253)
T ss_dssp T---TCCCTTSCCHHHHHHHHTCHHHHHHHHHS-TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT----CCTTCBC
T ss_pred C---CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC----CCCCCcC
Confidence 2 33566777777777777777777777776 44466777777777777777777777777777776 5677777
Q ss_pred CCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 153 VKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 153 ~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
.+|+||||+|+..|+. .+...+++...+ ....|..|.||+++|.+.
T Consensus 155 ~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNV-DAAVVLLKNGAN--KDMQNNREETPLFLAARE 200 (253)
T ss_dssp TTSCBHHHHHHHHTCH-HHHHHHHHTTCC--TTCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHHHcCCC--CCCcCCCCCCHHHHHHHC
Confidence 7777777777777765 233333332222 223367777777777654
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=2.4e-23 Score=179.38 Aligned_cols=180 Identities=12% Similarity=0.034 Sum_probs=134.3
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCC--CCchh-HhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPY--YPPSI-KSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~--~~~~~-~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
..|.+|.||||.|+..+...... +.++.+ ..... .+....+..|.++. ++++.|+++ ....+ .+.+|.
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~---~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~-~~~~~~ 105 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITS---FLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR-PLKPD-LNKITN 105 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHH---HHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS-SSCCC-TTCCCT
T ss_pred cCCCCCCCHHHHHHHcCCHHHHH---HHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcc-cccCCc
Confidence 47889999999999988766522 222333 11111 22334445555543 789999988 31111 233778
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHS 161 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~ 161 (313)
.|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+. +++|.+|.+|+||||+
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIEN--GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK---SAVNWQDKQGWTPLFH 180 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC---CCSCCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCc---ccccCcCCCCCCHHHH
Confidence 899999999999999999999998 88899999999999999999999999999999873 5789999999999999
Q ss_pred HHhcCCCCCcchHHh-hhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 162 AARSVPSSEVSGAAL-QMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 162 Aa~~~~~~~i~~~~l-~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
|+..|+. .+...++ +. ..+....|++|+||+++|.+.
T Consensus 181 A~~~~~~-~~v~~Ll~~~--ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 181 ALAEGHG-DAAVLLVEKY--GAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHTTCH-HHHHHHHHHH--CCCSCCBCTTSCBGGGGCSST
T ss_pred HHHcCCH-HHHHHHHHhc--CCCCCccCCCCCcHHHHHHHH
Confidence 9999987 3333333 22 223334489999999999653
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.89 E-value=4.4e-23 Score=179.00 Aligned_cols=152 Identities=12% Similarity=0.006 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhc
Q 041572 5 PHLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETE 80 (313)
Q Consensus 5 ~~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d 80 (313)
.++-.+|.+|.||||.|+..|..... .++++.+......+..+.+..|.++. ++++.|+++ ....+ .+|
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v---~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~---~~~ 74 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDIC---HMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKA-GALVD---PKD 74 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHH---HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCC---CCC
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHH---HHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCC---CCC
Confidence 34556666677777777666655431 11222222222112222233333332 555666555 22222 244
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHH
Q 041572 81 NVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILH 160 (313)
Q Consensus 81 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 160 (313)
..|.||||+|+..|+.++++.|++. .+..++..|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSN-GQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG----SDINIRDNEENICLH 149 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTT-TCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCccCCCCCCHHH
Confidence 4555555555555555555555555 33455555555555555555555555555555555 345555555555555
Q ss_pred HHHhcCCC
Q 041572 161 SAARSVPS 168 (313)
Q Consensus 161 ~Aa~~~~~ 168 (313)
+|+..|+.
T Consensus 150 ~A~~~~~~ 157 (237)
T 3b7b_A 150 WAAFSGCV 157 (237)
T ss_dssp HHHHHCCH
T ss_pred HHHHCCCH
Confidence 55555544
No 14
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.89 E-value=3e-23 Score=179.60 Aligned_cols=180 Identities=13% Similarity=-0.006 Sum_probs=133.4
Q ss_pred CCCccccccccCCCcchhhhhhhccCC-CCCchhHhhhhhccccHHHH----HHHHHHHhccccccc--hhhhhcCCCCc
Q 041572 13 DGDLEKQLSETSPFAFGLYISYFYLNP-YYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIAT--AAKETENVLKK 85 (313)
Q Consensus 13 ~g~t~l~l~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~--~~~~~d~~g~t 85 (313)
.|+||||.|++.|.... ...+++. +.....++..+.+..|.++. ++++.|++++ .... ....+|.+|+|
T Consensus 2 ~g~t~L~~A~~~g~~~~---v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~g~t 77 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQA---LSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAA-PELVFEPMTSELYEGQT 77 (232)
T ss_dssp CTTCHHHHHHHTTCHHH---HHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCCCCSTTTTTCC
T ss_pred CCCCHHHHHHHcCCHHH---HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC-chhccccccccCCCCcC
Confidence 58999999999887655 2223332 33333344455556666654 8899999883 3332 11346789999
Q ss_pred HHHHHHHhCcHHHHHHHHHhhCCCCcccccC-------------CCChHHHHHHHcCCHHHHHHHHcCCccccccccccc
Q 041572 86 PMFTAAKFGIYEIVMEIIISYFPWSLSFSNE-------------DGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADID 152 (313)
Q Consensus 86 pLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~-------------~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d 152 (313)
|||+|+..|+.++++.|++. +.+++.++. .|+||||+|+..|+.+++++|++.| +++|.+|
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d 151 (232)
T 2rfa_A 78 ALHIAVINQNVNLVRALLAR--GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG----ADIRAQD 151 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHT--TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT----CCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHhC--CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCCC
Confidence 99999999999999999998 777777665 7999999999999999999999998 7899999
Q ss_pred CCCCCHHHHHHhcCCCCCcc---hHHhhhhHHhh----hhhhcCCCCChhhhhhHhh
Q 041572 153 VKGVNILHSAARSVPSSEVS---GAALQMQRELQ----WFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 153 ~~G~TpLH~Aa~~~~~~~i~---~~~l~~~~~l~----~~~~n~~G~Tp~dla~~~~ 202 (313)
.+|+||||+|+..++.+.+. ..+++...... ....|++|.||+++|.+..
T Consensus 152 ~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 152 SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 99999999999999873211 22222221110 0234889999999998764
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=4.5e-23 Score=178.92 Aligned_cols=182 Identities=12% Similarity=0.083 Sum_probs=143.7
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+-..|.+|.||||.|+..+.... ..++++.+..+...+....+..|.++. ++++.|++++.... +.+|..
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~---~~~~~~ 110 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEA---VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV---NCQDDG 110 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHH---HHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCT---TCCCTT
T ss_pred cCccCCCCCCHHHHHHHhCCHHH---HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc---ccCCCC
Confidence 45578899999999999887655 334445555444444555566666654 89999998831232 347788
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|
T Consensus 111 g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A 184 (237)
T 3b7b_A 111 GWTPMIWATEYKHVDLVKLLLSK--GSDINIRDNEENICLHWAAFSGCVDIAEILLAAK----CDLHAVNIHGDSPLHIA 184 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT----CCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHH
Confidence 99999999999999999999998 7888999999999999999999999999999998 78999999999999999
Q ss_pred HhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 163 ARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 163 a~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
++.++. .+...+++... .....|++|+||+++|....+
T Consensus 185 ~~~~~~-~~v~~Ll~~ga--d~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 185 ARENRY-DCVVLFLSRDS--DVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HHTTCH-HHHHHHHTTTC--CTTCCCTTSCCHHHHSCTTCH
T ss_pred HHhCCH-hHHHHHHHcCC--CCCccCCCCCCHHHHHHHHHH
Confidence 999987 33334444333 233449999999999987654
No 16
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=9e-23 Score=179.53 Aligned_cols=155 Identities=16% Similarity=0.078 Sum_probs=118.9
Q ss_pred CCCCCCccccccccC---CCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchh--------hh
Q 041572 10 ENADGDLEKQLSETS---PFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAA--------KE 78 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~--------~~ 78 (313)
+|.+|.||||.|+.. +.... ++.|++.+ ...+.. ..
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~--------------------------------v~~Ll~~g-~~~~~~~~~~~~~~~~ 85 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNAC--------------------------------IMPLLQID-KDSGNPKPLVNAQCTD 85 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTT--------------------------------HHHHHHHH-HHTTCSSCGGGCCCCS
T ss_pred CCCCCCCHHHHHHHccccchHHH--------------------------------HHHHHhcC-Ccccchhhhccccccc
Confidence 789999999999976 44433 66666662 222210 11
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCC-------------CChHHHHHHHcCCHHHHHHHHc---CCc
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNED-------------GDDIFHAAVKHRQENVFNIIFN---MPK 142 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~iv~~Ll~---~~~ 142 (313)
+|..|+||||+|+..|+.++++.|++. +.+++.+|.. |+||||+|+..|+.+++++|++ .+
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g- 162 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVEN--GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP- 162 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-
Confidence 456799999999999999999999998 7888888876 9999999999999999999999 77
Q ss_pred ccccccccccCCCCCHHHHHHhcCCCC-C-------cchHHhhhhHHhhh-----hhhcCCCCChhhhhhHhhh
Q 041572 143 AQTFFVADIDVKGVNILHSAARSVPSS-E-------VSGAALQMQRELQW-----FKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 143 ~~~~~in~~d~~G~TpLH~Aa~~~~~~-~-------i~~~~l~~~~~l~~-----~~~n~~G~Tp~dla~~~~~ 203 (313)
+++|.+|.+|+||||+|+..++.. . +...+++...++.. ...|.+|.||+++|.+...
T Consensus 163 ---a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 163 ---ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred ---CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 789999999999999999944321 1 33344443333310 4459999999999988653
No 17
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.88 E-value=8.1e-23 Score=177.66 Aligned_cols=178 Identities=15% Similarity=0.061 Sum_probs=120.5
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCC----CchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYY----PPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
.|.+|.||||.|+..|...... .++.... .....+..+.+..|.++. ++++.|++++ .+. +.+|.
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~---~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~---~~~~~ 76 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTM---EVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-CDP---ELRDF 76 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSS---CCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCS---CCCCT
T ss_pred CCCCCCchhHHHHHcCChhHHH---HHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCC---CCcCC
Confidence 5778889999888888765421 1222111 112223334455555553 7888888773 333 33677
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCC-----CCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccC-CC
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFP-----WSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDV-KG 155 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~-----~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~-~G 155 (313)
.|+||||+|+..|+.++++.|++. +. ..++..|..|+||||+|+.+|+.+++++|++.+ ++++.+|. +|
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~~g 151 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQS-CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG----ADVNAQEPCNG 151 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHS-TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT----CCTTCCCTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhc-ccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCC
Confidence 888999999999999999888887 42 225677888889999999999999999888887 67888887 88
Q ss_pred CCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 156 VNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 156 ~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+||||+|+..|+. .+...+++... .....|..|.||+++|.+..
T Consensus 152 ~tpL~~A~~~~~~-~~v~~Ll~~ga--~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 152 RTALHLAVDLQNP-DLVSLLLKCGA--DVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHTTTC--CSCCCCTTCCCGGGGCTTSS
T ss_pred CCHHHHHHHcCCH-HHHHHHHHcCC--CCCcccCCCCCHHHHHHccC
Confidence 8999999888876 34444444322 23344888889988887653
No 18
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=6e-23 Score=169.05 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=119.1
Q ss_pred CCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHHHHHH
Q 041572 13 DGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMFTAAK 92 (313)
Q Consensus 13 ~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~ 92 (313)
+|.||||.|+..|.... ++.|++. ... .+.+|..|+||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~--------------------------------v~~ll~~-~~~---~~~~~~~g~t~L~~A~~ 45 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLY--------------------------------LATRIEQ-ENV---INHTDEEGFTPLMWAAA 45 (167)
T ss_dssp TTCCCHHHHHHTTCHHH--------------------------------HHHHHHH-SSC---TTCCCTTSCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHH--------------------------------HHHHHHc-CCC---cCCCCCCCCCHHHHHHH
Confidence 57889999887765433 7778777 333 34478899999999999
Q ss_pred hCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCCCCcc
Q 041572 93 FGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVS 172 (313)
Q Consensus 93 ~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~ 172 (313)
.|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+. .+.
T Consensus 46 ~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~-~~v 118 (167)
T 3v31_A 46 HGQIAVVEFLLQN--GADPQLLGKGRESALSLACSKGYTDIVKMLLDCG----VDVNEYDWNGGTPLLYAVHGNHV-KCV 118 (167)
T ss_dssp TTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT----CCTTCCCTTSCCHHHHHHHTTCH-HHH
T ss_pred CCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC----CCCCcCCCCCCCHHHHHHHcCCH-HHH
Confidence 9999999999998 7888999999999999999999999999999988 78999999999999999999987 333
Q ss_pred hHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 173 GAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 173 ~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
..+++.. ......|.+|.||+++|.+..
T Consensus 119 ~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 119 KMLLESG--ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHTT--CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHcC--CCCCCcCCCCCCHHHHHHHcC
Confidence 3444332 223334889999999998764
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=6.2e-23 Score=181.62 Aligned_cols=177 Identities=15% Similarity=0.057 Sum_probs=129.9
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+-..|.+|.||||.|+..|.... ....++.+..+...+....+..|.++. ++++.|+++ ....+ .+.+
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~----~~~~ 100 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSC---VKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQ----PESD 100 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHH---HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSS----CSCT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHH---HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCC----CCCC
Confidence 44577889999999998877655 222333333333334444455565543 788888888 34333 2456
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ +++|. |.+|+||||+|
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~-~~~g~t~Lh~A 173 (261)
T 2xai_A 101 LASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESG----ADVNQ-GKGQDSPLHAV 173 (261)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT----CCTTC-CBTTBCHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC----CCCCC-CCCCCChHHHH
Confidence 89999999999999999999988 7788889999999999999999999999999987 56674 88899999999
Q ss_pred HhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 163 ARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 163 a~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
++.++. .+...+++... +....|++|+||+++|.++
T Consensus 174 ~~~~~~-~~v~~Ll~~ga--d~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 174 ARTASE-ELACLLMDFGA--DTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHHTCH-HHHHHHHHTTC--CTTCCCTTSCCGGGGSCTT
T ss_pred HHcCCH-HHHHHHHHcCC--CCCCcCCCCCChhhhcccc
Confidence 999887 33344444322 3344489999999999754
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.88 E-value=5.1e-23 Score=182.67 Aligned_cols=180 Identities=14% Similarity=0.055 Sum_probs=122.1
Q ss_pred CCCCCCCCccccccccCCCcchhhhhhhccCCCCC---chhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhc
Q 041572 8 HSENADGDLEKQLSETSPFAFGLYISYFYLNPYYP---PSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETE 80 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d 80 (313)
-..|++|.||||.|++.|....... +++.+.. ...++..+.+..|.++. ++++.|+++ ..++ +.+|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~---Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~---~~~~ 75 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDF---LLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA-GAGV---LVAE 75 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHH---HHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCS---SCCC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHH---HHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC---CCCC
Confidence 4578999999999999887765222 1111111 11222334455565554 788888887 3433 3367
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHhhCCC----------------------------------------------Ccccc
Q 041572 81 NVLKKPMFTAAKFGIYEIVMEIIISYFPW----------------------------------------------SLSFS 114 (313)
Q Consensus 81 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~----------------------------------------------~~~~~ 114 (313)
..|+||||+|+..|+.++++.|++. .+. .++.+
T Consensus 76 ~~g~tpL~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1oy3_D 76 RGGHTALHLACRVRAHTCACVLLQP-RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154 (282)
T ss_dssp TTSCCHHHHHTTTTCHHHHHHHSSS-CCSSCCCC-----------------------------------CCCGGGGTTCC
T ss_pred CCCCCHHHHHHHcCCcchhHhhhcc-CCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc
Confidence 7888888888888888888888875 221 25567
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCC-CCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCC
Q 041572 115 NEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVK-GVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKT 193 (313)
Q Consensus 115 d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~-G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~T 193 (313)
|..|+||||+|+..|+.+++++|++.+ ++++.+|.. |+||||+|++.|+. .+...+++.. ......|.+|.|
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~g--ad~~~~d~~g~t 227 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDAG----ADLNKPEPTCGRTPLHLAVEAQAA-SVLELLLKAG--ADPTARMYGGRT 227 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHT----CCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTSCC
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCcCHHHHHHHcCCH-HHHHHHHHcC--CCCcccccCCCC
Confidence 778888888888888888888888877 677777754 88888888888876 3333444332 223334788888
Q ss_pred hhhhhhHhh
Q 041572 194 PRELFTEEH 202 (313)
Q Consensus 194 p~dla~~~~ 202 (313)
|+++|.+..
T Consensus 228 pL~~A~~~~ 236 (282)
T 1oy3_D 228 PLGSALLRP 236 (282)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHHHcC
Confidence 888887643
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=5.3e-23 Score=178.86 Aligned_cols=185 Identities=12% Similarity=0.080 Sum_probs=145.8
Q ss_pred CCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhcccccc---chhhh
Q 041572 6 HLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIA---TAAKE 78 (313)
Q Consensus 6 ~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~---~~~~~ 78 (313)
++-..|.+|.||||+|+..+.... ..++++.+..+...+..+.+..|.++. ++++.|++.+ ... ...+.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~ 112 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEI---AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC-TTPHLHSILKA 112 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHH---HHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhc
Confidence 456778999999999999987655 455566666665556666777777764 8999999883 321 12345
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccC-CCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNE-DGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN 157 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 157 (313)
+|..|.||||+|+..|+.++++.|++. +.+++.+|. .|+||||+|+..|+.+++++|++.| ++++.+|..|.|
T Consensus 113 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t 186 (236)
T 1ikn_D 113 TNYNGHTCLHLASIHGYLGIVELLVSL--GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG----ADVNRVTYQGYS 186 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT----CCSCCCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcccCCCCC
Confidence 788999999999999999999999999 888899997 9999999999999999999999998 789999999999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
|||+|+..|+. .+...+++...+......|.+|+||.|...+.
T Consensus 187 pl~~A~~~~~~-~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 187 PYQLTWGRPST-RIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp GGGGCTTSSCH-HHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHHccCch-HHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 99999999987 44445555444333334488999999876543
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=1.6e-22 Score=168.64 Aligned_cols=132 Identities=14% Similarity=0.120 Sum_probs=108.8
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.+++++.. +.+.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 19 ~~v~~ll~~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (179)
T 3f6q_A 19 VAVRLWLDNTEN---DLNQGDDHGFSPLHWACREGRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDIVQKLLQ 93 (179)
T ss_dssp HHHHHHHHCTTS---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcCcc---cccccCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 447788777222 2344788999999999999999999999998 88899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
.+ +++|.+|.+|+||||+|+..|+. .+...+++... .....|.+|.||+++|.+...
T Consensus 94 ~g----~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~ga--~~~~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 94 YK----ADINAVNEHGNVPLHYACFWGQD-QVAEDLVANGA--LVSICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTC--CSSBCCTTSCCGGGGSCHHHH
T ss_pred cC----CCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHCCC--CcchhccCCCCcHHHHHHHHH
Confidence 98 78999999999999999999987 33334444322 233348999999999987543
No 23
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=2e-22 Score=177.60 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=96.8
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCccccc--------------CCCChHHHHHHHcCCHHHHHHHHc---CC
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSN--------------EDGDDIFHAAVKHRQENVFNIIFN---MP 141 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~iv~~Ll~---~~ 141 (313)
+|..|+||||+||..|+.++++.|++. +.+++.+| ..|+||||+|+..|+.+++++|++ .+
T Consensus 89 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 89 VYYRGQTALHIAIERRCKHYVELLVEK--GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp SSEESBCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhC--CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 456899999999999999999999998 78888888 689999999999999999999999 77
Q ss_pred cccccccccccCCCCCHHHHHHhcCCCC--------CcchHHhhhhHHhhh-----hhhcCCCCChhhhhhHhh
Q 041572 142 KAQTFFVADIDVKGVNILHSAARSVPSS--------EVSGAALQMQRELQW-----FKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 142 ~~~~~~in~~d~~G~TpLH~Aa~~~~~~--------~i~~~~l~~~~~l~~-----~~~n~~G~Tp~dla~~~~ 202 (313)
+++|.+|.+|+||||+|++.++.. .+...+++...++.. ...|.+|.||+++|.+..
T Consensus 167 ----a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 167 ----ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp ----CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred ----CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 789999999999999999888731 122233333233211 335899999999998865
No 24
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=2.7e-22 Score=165.95 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=107.1
Q ss_pred HHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcC
Q 041572 61 ILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNM 140 (313)
Q Consensus 61 il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~ 140 (313)
+++.+++++ .. ..+.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.
T Consensus 17 ~v~~ll~~~-~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (172)
T 3v30_A 17 QLKEHLRKG-DN--LVNKPDERGFTPLIWASAFGEIETVRFLLEW--GADPHILAKERESALSLASTGGYTDIVGLLLER 91 (172)
T ss_dssp HHHHHHTTC-SG--GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHcC-cc--cccCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHc
Confidence 377777773 21 2344788999999999999999999999998 788899999999999999999999999999999
Q ss_pred CcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 141 PKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 141 ~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+ ++++.+|.+|+||||+|+..|+. .+...+++.. ......|.+|.||+++|....
T Consensus 92 g----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 92 D----VDINIYDWNGGTPLLYAVRGNHV-KCVEALLARG--ADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp T----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHT
T ss_pred C----CCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC--CCccccCCCCCCHHHHHHHhC
Confidence 8 78999999999999999999987 3334444432 233344889999999998764
No 25
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=1.4e-22 Score=180.13 Aligned_cols=187 Identities=11% Similarity=0.009 Sum_probs=132.0
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhc-cCCCCCch----hHhhhhhccccHHH-------HHHHHHHHhccccccch-
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFY-LNPYYPPS----IKSIRNTKLTHKQT-------LEILRIICVGAVDIATA- 75 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~-l~~~~~~~----~~~~~~~k~~~~~~-------~~il~~l~~~~~~~~~~- 75 (313)
..|.+|.|+||.|++.|.......+... .+.+.... .++..+.+..|.++ .++++.|++++ ...+.
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g-a~~~~~ 86 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA-RKTDSL 86 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH-HHTTCH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh-ccccch
Confidence 4688899999999999887653322221 11111100 12233445556655 37899999883 32111
Q ss_pred -------hhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccC--------------CCChHHHHHHHcCCHHHH
Q 041572 76 -------AKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNE--------------DGDDIFHAAVKHRQENVF 134 (313)
Q Consensus 76 -------~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~--------------~G~t~Lh~A~~~g~~~iv 134 (313)
...+|..|+||||+|+..|+.++++.|++. +.+++.+|. .|+||||+|+..|+.+++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN--GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 011566899999999999999999999998 788888887 799999999999999999
Q ss_pred HHHHc---CCcccccccccccCCCCCHHHHHHhcCCCC--------CcchHHhhhhHHhhh-----hhhcCCCCChhhhh
Q 041572 135 NIIFN---MPKAQTFFVADIDVKGVNILHSAARSVPSS--------EVSGAALQMQRELQW-----FKLNDKDKTPRELF 198 (313)
Q Consensus 135 ~~Ll~---~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~--------~i~~~~l~~~~~l~~-----~~~n~~G~Tp~dla 198 (313)
++|++ .+ +++|.+|.+|+||||+|+..|+.. .+...+++...++.. ...|.+|.||+++|
T Consensus 165 ~~Ll~~~~~g----ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 165 KFLLQNSWQP----ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHCSSCC----CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHhcccCC----CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 99999 77 789999999999999999988741 122223333223221 12488999999999
Q ss_pred hHhh
Q 041572 199 TEEH 202 (313)
Q Consensus 199 ~~~~ 202 (313)
.+..
T Consensus 241 ~~~g 244 (273)
T 2pnn_A 241 ASSG 244 (273)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 8764
No 26
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=1.3e-22 Score=164.94 Aligned_cols=130 Identities=16% Similarity=0.164 Sum_probs=108.0
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|++++ ...+ .|..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 16 ~~v~~Ll~~g-~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 88 (153)
T 1awc_B 16 DEVRILMANG-APFT----TDWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLK 88 (153)
T ss_dssp HHHHHHHHHT-CCCC----CCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHcC-CCCC----cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHH
Confidence 5588888883 3322 577899999999999999999999998 78889999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
.+ +++|.+|.+|+||||+|+..|+. .+...+++.. ......|..|.||+++|.+...
T Consensus 89 ~g----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 89 HG----ADVNAKDMLKMTALHWATEHNHQ-EVVELLIKYG--ADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTC
T ss_pred cC----CCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC--CCccccCCCCCCHHHHHHHcCC
Confidence 98 78999999999999999999987 3333444332 2333448899999999987643
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.87 E-value=1.7e-22 Score=173.99 Aligned_cols=178 Identities=15% Similarity=-0.004 Sum_probs=131.0
Q ss_pred CCccccccccCCCcchhhhhhhccCCCCCch-hHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 14 GDLEKQLSETSPFAFGLYISYFYLNPYYPPS-IKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 14 g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
|+||||.|++.|....... +++.+.... ..+..+.+..|.++. ++++.|+++ ....+....+|..|+||||
T Consensus 2 g~t~L~~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQE---LLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHH---HHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSCCHHH
T ss_pred CccHHHHHHHhCCHHHHHH---HHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCCCHHH
Confidence 7899999999887655222 111111111 122233445555553 899999998 4444443337789999999
Q ss_pred HHHHhCcHHHHHHHHHhhC-CCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCC
Q 041572 89 TAAKFGIYEIVMEIIISYF-PWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVP 167 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~-~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 167 (313)
+|+..|+.++++.|++. . +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+
T Consensus 78 ~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG----ASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HHHHHCCHHHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC----CCccccCCCCCCHHHHHHHcCC
Confidence 99999999999999998 2 2778889999999999999999999999999998 7899999999999999999998
Q ss_pred CCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 168 SSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 168 ~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
. .+...+++.. .......|.+|.||+++|.+..
T Consensus 153 ~-~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 153 L-KLIELLCGLG-KSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp H-HHHHHHHTTT-CCCSCCCCTTSCCHHHHHHHTT
T ss_pred H-HHHHHHHhcC-cccccCcCCCCCCHHHHHHHcC
Confidence 7 3333333332 0222334889999999998754
No 28
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.87 E-value=3.3e-22 Score=169.13 Aligned_cols=179 Identities=9% Similarity=-0.030 Sum_probs=131.6
Q ss_pred CCCCccccccccCCCcchhhhhhhccCCCC-CchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcH
Q 041572 12 ADGDLEKQLSETSPFAFGLYISYFYLNPYY-PPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 12 ~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
..+.|+||.|+..+..... ..++..+. .....+..+.+..|.++. ++++.|+++ ..+. +.+|..|+||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v---~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~---~~~~~~g~t~ 75 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKV---KEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADI---NLQNSISDSP 75 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHH---HHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCT---TCCCTTSCCH
T ss_pred cccccHHHHHHHhccHHHH---HHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC---CCCCCCCCCH
Confidence 4578888888887766552 22222221 222223334445555543 789999998 3433 4478899999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcC
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSV 166 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 166 (313)
||+|+..|+.++++.|++. .+..++.+|..|+||||+|+..|+.+++++|++.+. .+++.+|.+|+||||+|+..+
T Consensus 76 l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKH-ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC---CCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHHHHcCCHHHHHHHHhc-cCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCcCCCCCCCCCHHHHHHHhc
Confidence 9999999999999999977 688899999999999999999999999999999873 578999999999999999988
Q ss_pred CCC----CcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 167 PSS----EVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 167 ~~~----~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
+.. .+...+++.. ......|.+|.||+++|.+...
T Consensus 152 ~~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENG--ADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp CCSHHHHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTC
T ss_pred cchhhHHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHcCC
Confidence 731 2222333322 2233348899999999987643
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=1.2e-22 Score=182.35 Aligned_cols=85 Identities=19% Similarity=0.219 Sum_probs=68.3
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCCh
Q 041572 115 NEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTP 194 (313)
Q Consensus 115 d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp 194 (313)
+..|+||||+|+.+|+.+++++|++.+ +++|.+|.+|+||||+|+..|+. .+...+++...+ ....|..|+||
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~d~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~gad--~~~~d~~g~t~ 268 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQAR----YDVNIKDYDGWTPLHAAAHWGKE-EACRILVENLCD--MEAVNKVGQTA 268 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTT----CCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCC--TTCCCTTSCCT
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcC----CCCCCcCCCCCcHHHHHHhcCCH-HHHHHHHHcCCC--CCCcCCCCCCH
Confidence 456889999999999999999999998 78999999999999999999987 344444444333 33449999999
Q ss_pred hhhhhHhhhhhh
Q 041572 195 RELFTEEHKGLV 206 (313)
Q Consensus 195 ~dla~~~~~~l~ 206 (313)
+++|.+...+.+
T Consensus 269 l~~A~~~~~~~l 280 (299)
T 1s70_B 269 FDVADEDILGYL 280 (299)
T ss_dssp TTSCCSGGGHHH
T ss_pred HHHHHHHHHHHH
Confidence 999987654443
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=2.4e-22 Score=180.39 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=81.0
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+..+|.+|.||||.|+..|.... ...+++.+......+..+.+..|.++. ++++.|+++ ..++ +.+|.+
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~---~~~~~~ 124 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLS---LRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH-GAQV---NGVTAD 124 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHH---HHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCS---SCCCTT
T ss_pred ccCCCccCCCHHHHHHHcCCHHH---HHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCC---CCCCCC
Confidence 34567777777777777766544 222223333333333334444454443 666666666 2322 224555
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|+||||+|+..|+.++++.|++. +..++. +..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQH--GASVQP-ESDLASPIHEAARRGHVECVNSLIAYG----GNIDHKISHLGTPLYLA 197 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT--TCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTT----CCTTCCBTTTBCHHHHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHC--CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCCHHHHH
Confidence 66666666666666666666655 333332 233666666666666666666666555 45555666666666666
Q ss_pred HhcCCC
Q 041572 163 ARSVPS 168 (313)
Q Consensus 163 a~~~~~ 168 (313)
+..|+.
T Consensus 198 ~~~~~~ 203 (285)
T 3d9h_A 198 CENQQR 203 (285)
T ss_dssp HHTTCH
T ss_pred HHcCcH
Confidence 665554
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.86 E-value=4.1e-22 Score=172.95 Aligned_cols=182 Identities=12% Similarity=0.036 Sum_probs=132.3
Q ss_pred CCCCCCCccccccccCCCcchhhhhhh-ccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCC
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYF-YLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVL 83 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g 83 (313)
..|++|.||||.|++.|.......... ....+......+..+.+..|.++. ++++.|++++ ... +.+|..|
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~---~~~~~~g 79 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG-ASP---MALDRHG 79 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCT---TCCCTTS
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcC-CCc---cccCCCC
Confidence 468999999999999988765222211 111222222233334455565553 8899999883 333 3468899
Q ss_pred CcHHHHHHHhCcHHHHHHHHHhhCCC---CcccccCCCChHHHHHHHcCCHHHHHHHHcCCccccccccccc-CCCCCHH
Q 041572 84 KKPMFTAAKFGIYEIVMEIIISYFPW---SLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADID-VKGVNIL 159 (313)
Q Consensus 84 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~---~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d-~~G~TpL 159 (313)
+||||+|+..|+.++++.|++. .+. .++.+|..|+||||+|+..|+.+++++|++.+ .+++.+| ..|.|||
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG----ADIDAVDIKSGRSPL 154 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTTCCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC----CCcccccccCCCcHH
Confidence 9999999999999999999998 431 67888999999999999999999999999988 6788888 8899999
Q ss_pred HHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 160 HSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 160 H~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|+|++.|+. .+...+++.. ......|.+|.||+++|....
T Consensus 155 ~~A~~~~~~-~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 155 IHAVENNSL-SMVQLLLQHG--ANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HHHHHTTCH-HHHHHHHHTT--CCTTCBCTTSCBHHHHHHHHT
T ss_pred HHHHHcCCH-HHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcC
Confidence 999999987 3333444332 223344889999999997654
No 32
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.86 E-value=2.4e-22 Score=166.15 Aligned_cols=131 Identities=17% Similarity=0.106 Sum_probs=109.6
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..++ +.+|..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 28 ~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 101 (169)
T 2y1l_E 28 DEVRILMAN-GADV---NAEDASGWTPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVEVLLK 101 (169)
T ss_dssp HHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHC-CCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 568889888 3443 34788999999999999999999999998 78889999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
.+ ++++.+|.+|+||||+|++.|+. .+...+++.. ......|..|.||+++|.+...
T Consensus 102 ~g----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 102 NG----ADVNANDMEGHTPLHLAAMFGHL-EIVEVLLKNG--ADVNAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTC
T ss_pred cC----CCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC--CCCCCcCCCCCCHHHHHHHhCC
Confidence 98 78999999999999999999987 3333444332 2233448899999999987643
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=4.3e-22 Score=188.43 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=63.8
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
+|..|+||||+|+..|+.++++.|++. +..++.+|..|+||||+|+.+|+.+++++|++.+ +++|.+|..|+||
T Consensus 274 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~n~~~~~g~t~ 347 (437)
T 1n11_A 274 GNKSGLTPLHLVAQEGHVPVADVLIKH--GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ----ADVNAKTKLGYSP 347 (437)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT----CCTTCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhC--CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC----CCCCCCCCCCCCH
Confidence 455566666666666666666666655 5555556666666666666666666666666655 4556666666666
Q ss_pred HHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 159 LHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 159 LH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
||+|++.|+. .+...+++... .....|.+|+||+++|.+.
T Consensus 348 L~~A~~~g~~-~iv~~Ll~~ga--~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 348 LHQAAQQGHT-DIVTLLLKNGA--SPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HHHHHHTTCH-HHHHHHHHTTC--CSCCCCSSSCCHHHHHHHT
T ss_pred HHHHHHCChH-HHHHHHHHCcC--CCCCCCCCCCCHHHHHHHc
Confidence 6666666654 22222332221 1222255666666666554
No 34
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.86 E-value=5.8e-22 Score=180.90 Aligned_cols=118 Identities=13% Similarity=0.088 Sum_probs=74.8
Q ss_pred CCCCcHHHHHHHh---CcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC
Q 041572 81 NVLKKPMFTAAKF---GIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN 157 (313)
Q Consensus 81 ~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 157 (313)
..|.||||+|+.. +..++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+ +++|.+|..|+|
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~n~~d~~g~t 282 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRK--GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG----AKMNALDSLGQT 282 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCC
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCC
Confidence 3455555555555 335555555555 5556667777777888888777777777777777 677777777888
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhhhhhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHKGLVK 207 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~~l~~ 207 (313)
|||+|+..|+. .+...+++...+ ....|.+|.||++++.+.-.+++.
T Consensus 283 ~L~~A~~~~~~-~~v~~Ll~~gad--~~~~~~~g~tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 283 ALHRAALAGHL-QTCRLLLSYGSD--PSIISLQGFTAAQMGNEAVQQILS 329 (351)
T ss_dssp HHHHHHHHTCH-HHHHHHHHTTCC--TTCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHHHcCcH-HHHHHHHHcCCC--CCCcCCCCCChhhhhhHHHHHHHH
Confidence 88888777776 333333333222 223377788888877655444443
No 35
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=2.2e-22 Score=186.17 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=133.0
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccc-cchhhh---
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDI-ATAAKE--- 78 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~-~~~~~~--- 78 (313)
+-.+|.+|.||||+|+..|........ ++.+... ......+..|.++. ++++.|++.+ .. -...+.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~L---l~~g~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~ 119 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYL---ASVGEVH--SLWHGQKPIHLAVMANKTDLVVALVEGA-KERGQMPESLLN 119 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHH---HHHCCCC--CCBTTBCHHHHHHHTTCHHHHHHHHHHH-HHHTCCHHHHHT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHH---HHCCCCc--cccCCCCHHHHHHHcCCHHHHHHHHHhc-cccCCCHHHHHh
Confidence 345678888888888888776552222 1211110 11123334444443 6777777761 11 112222
Q ss_pred --------------hcCCCCcHHHHHHHhC--cHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCc
Q 041572 79 --------------TENVLKKPMFTAAKFG--IYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPK 142 (313)
Q Consensus 79 --------------~d~~g~tpLh~Aa~~G--~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 142 (313)
+|..|.||||+|+..| +.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 197 (364)
T 3ljn_A 120 ECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL--GASPTAKDKADETPLMRAMEFRNREALDLMMDTVP 197 (364)
T ss_dssp CCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCS
T ss_pred hcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 7789999999999999 99999999999 88899999999999999999999999999999873
Q ss_pred c-cccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 143 A-QTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 143 ~-~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
. ...++|.+|.+|+||||+|+..|+. .+...+++...+ ....|.+|.||+++|.+..
T Consensus 198 ~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~gad--~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 198 SKSSLRLDYANKQGNSHLHWAILINWE-DVAMRFVEMGID--VNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp CSSSCCTTCCCTTCCCTTHHHHTTTCH-HHHHHHHTTTCC--TTCCCTTSCCHHHHHHHTC
T ss_pred ccccccccccCCCCCcHHHHHHHcCCH-HHHHHHHHcCCC--CCCCCCCCCCHHHHHHHhC
Confidence 2 1223899999999999999999987 444445544333 3344899999999998764
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.86 E-value=3.8e-22 Score=178.49 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=103.3
Q ss_pred CCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHH
Q 041572 8 HSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPM 87 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpL 87 (313)
-..|.+|.||||.|+..+.... ++.|++.+.... +.+|..|.|||
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~--------------------------------v~~Ll~~g~~~~---~~~~~~g~tpL 149 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPV--------------------------------VQQLLDSGVCKV---DKQNRAGYSPI 149 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHH--------------------------------HHHHHHTSCCCT---TCCCTTSCCHH
T ss_pred cCCCCCCCCHHHHHHHCCCHHH--------------------------------HHHHHHCCCCcC---CCCCCCCCCHH
Confidence 3568889999999987765443 667776631122 33667777888
Q ss_pred HHHH-----HhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 88 FTAA-----KFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 88 h~Aa-----~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|+|+ ..|+.++++.|++. +...+..|..|+||||+|+.+|+.+++++|++.| +++|.+|.+|+||||+|
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~--g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g----ad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRL--GNINAKASQAGQTALMLAVSHGRVDVVKALLACE----ADVNVQDDDGSTALMCA 223 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHH--SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC----CCCCCCCCCCCCHHHHH
Confidence 8777 66777777777777 5666667777788888888888888888887777 67777777888888888
Q ss_pred HhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 163 ARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 163 a~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+..|+. .+...+++. ...+....|++|.||+++|.+..
T Consensus 224 ~~~g~~-~iv~~Ll~~-~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 224 CEHGHK-EIAGLLLAV-PSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp HHHTCH-HHHHHHHTS-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHCCCH-HHHHHHHhc-CCCCCcCcCCCCCCHHHHHHHcC
Confidence 877775 333333320 12222333777788888777653
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=2.6e-22 Score=163.23 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=105.4
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++.. .+.+.+|..|+||||+ |..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 16 ~~v~~ll~~~~---~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 89 (156)
T 1bd8_A 16 QEVRRLLHREL---VHPDALNRFGKTALQV-MMFGSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVE 89 (156)
T ss_dssp HHHHHHHHTTC---CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhhC---cCccccCCCCCcHHHH-HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 44777776611 1234478889999999 999999999999998 88899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.| +++|.+|.+|+||||+|++.|+. .+...+++. ......|.+|.||+++|.+..
T Consensus 90 ~g----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~---~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 90 HG----ADVNVPDGTGALPIHLAVQEGHT-AVVSFLAAE---SDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp TT----CCSCCCCTTSCCHHHHHHHHTCH-HHHHHHHTT---SCTTCCCTTSCCHHHHHHHSC
T ss_pred cC----CCCCCcCCCCCcHHHHHHHhChH-HHHHHHHhc---cCCCCcCCCCCCHHHHHHHcC
Confidence 88 78999999999999999999987 333344433 233444889999999998754
No 38
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=175.89 Aligned_cols=176 Identities=14% Similarity=0.040 Sum_probs=124.2
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+-..|.+|.||||+|+..+.... ..++++.+......+....+..|.++. ++++.|+++ ....+ .+.+
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~---v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~----~~~~ 156 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSC---VKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQ----PESD 156 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHH---HHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSS----CSCT
T ss_pred CCCcCCCCCCHHHHHHHCCcHHH---HHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC-CCCCC----CCCC
Confidence 44567788888888888877655 223333344333344445555666554 788888887 33332 2345
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSA 162 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~A 162 (313)
|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ +++| +|..|+||||+|
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~-~~~~g~t~L~~A 229 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESG----ADVN-QGKGQDSPLHAV 229 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT----CCTT-CCBTTBCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC----CCCC-CCCCCCCHHHHH
Confidence 88888888888888888888887 7778888888888888888888888888888887 5666 378888888888
Q ss_pred HhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhH
Q 041572 163 ARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTE 200 (313)
Q Consensus 163 a~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~ 200 (313)
++.++. .+...+++. ..+....|++|+||+++|.+
T Consensus 230 ~~~~~~-~~v~~Ll~~--gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 230 VRTASE-ELACLLMDF--GADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HHTTCH-HHHHHHHHT--TCCTTCCCTTSCCGGGGSCT
T ss_pred HHcCCH-HHHHHHHHC--CCCCCCcCCCCCCHHHHhcC
Confidence 888876 333344433 22334448888888888874
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=1e-21 Score=162.46 Aligned_cols=165 Identities=12% Similarity=-0.038 Sum_probs=114.5
Q ss_pred CCccccccccCCCcchhhhhhhccCCCCC-chhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 14 GDLEKQLSETSPFAFGLYISYFYLNPYYP-PSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 14 g~t~l~l~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
+.||||.|+..|.... ...++..+.. ....+....+..|.++. ++++.|++++ .+. +.+|..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~---v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~---~~~~~~g~t~L~ 74 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQ---LKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADP---HILAKERESALS 74 (172)
T ss_dssp --CCHHHHHHTTCHHH---HHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCT---TCCCTTCCCHHH
T ss_pred chhhHHHHHHcCCHHH---HHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCc---hhhcccCCCHHH
Confidence 4567777777766554 2222222211 11122233344454443 7899999883 333 447889999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|++.|+.
T Consensus 75 ~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 75 LASTGGYTDIVGLLLER--DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG----ADLTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp HHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccCCCCCCHHHHHHHhCcH
Confidence 99999999999999998 8889999999999999999999999999999998 78999999999999999999987
Q ss_pred CCcchHHhhhhHHhhhhhhcCCCCCh
Q 041572 169 SEVSGAALQMQRELQWFKLNDKDKTP 194 (313)
Q Consensus 169 ~~i~~~~l~~~~~l~~~~~n~~G~Tp 194 (313)
.+...+++.. ......|..|.||
T Consensus 149 -~~~~~L~~~~--~~~~~~~~~~~~p 171 (172)
T 3v30_A 149 -KVQQVIENHI--LKLFQSNLVPADP 171 (172)
T ss_dssp -HHHHHHHHHH--HHHSCC-------
T ss_pred -HHHHHHHHHH--HHHhcccCCCCCC
Confidence 3333333332 2334447777776
No 40
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.85 E-value=3.1e-22 Score=163.66 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=104.5
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..+. +.+|..|+||||+|+. |+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 19 ~~v~~Ll~~-~~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 91 (162)
T 1ihb_A 19 EQLTSLLQN-NVNV---NAQNGFGRTALQVMKL-GNPEIARRLLLR--GANPDLKDRTGFAVIHDAARAGFLDTLQTLLE 91 (162)
T ss_dssp HHHHHHTTS-CCCT---TCCCTTSCCHHHHCCS-SCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhC-CCCc---cccCccCccHHHHHHc-CcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 458888877 3333 3477889999999999 999999999998 78889999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.+ +++|.+|.+|+||||+|++.|+. .+...+++.... .....|..|.||+++|.+..
T Consensus 92 ~g----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 92 FQ----ADVNIEDNEGNLPLHLAAKEGHL-RVVEFLVKHTAS-NVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHSCC-CTTCCCTTSCCHHHHHHHTT
T ss_pred cC----CCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHccCC-CCCCcCCCCCcHHHHHHHcC
Confidence 88 78899999999999999999987 333333332221 02333888999999998764
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.85 E-value=8.7e-22 Score=174.22 Aligned_cols=172 Identities=11% Similarity=0.060 Sum_probs=126.8
Q ss_pred CCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 13 DGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 13 ~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
+|.||||.|+..|..... ...++.+..+...+..+.+..|.++. ++++.|+++ ..+. +.+|.+|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v---~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~---~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSL---RNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH-GAQV---NGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHH---HHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCT---TCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHH---HHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCC---CCCCCCCCCHHH
Confidence 689999999998877652 22333343333344445556666654 789999988 3433 347888999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+|+..|+.++++.|++. +..++. +.+|+||||+|+..|+.+++++|++.+ +++|.+|.+|+||||+|+..|+.
T Consensus 75 ~A~~~~~~~~v~~Ll~~--g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQH--GASVQP-ESDLASPIHEAARRGHVECVNSLIAYG----GNIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp HHHHHTCHHHHHHHHHT--TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCBTTTBCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHC--CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcC----CCCCcCCCCCCCHHHHHHHhCCH
Confidence 99999999999999998 666653 556999999999999999999999988 68899999999999999999887
Q ss_pred CCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 169 SEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 169 ~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.+...+++...++. .|..|.||+++|....
T Consensus 148 -~~v~~Ll~~g~~~~---~~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 148 -ACVKKLLESGADVN---QGKGQDSPLHAVARTA 177 (261)
T ss_dssp -HHHHHHHHHTCCTT---CCBTTBCHHHHHHHHT
T ss_pred -HHHHHHHHcCCCCC---CCCCCCChHHHHHHcC
Confidence 33334443332222 2778999999987654
No 42
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=2.3e-22 Score=184.20 Aligned_cols=151 Identities=13% Similarity=0.064 Sum_probs=111.1
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHHH
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMFT 89 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~ 89 (313)
.|.+|.||||.|+..|.. ++++.|++++ .++ +.+|.+|+||||+
T Consensus 127 ~d~~g~TpLh~Aa~~g~~--------------------------------~~v~~Ll~~G-ad~---n~~d~~g~TpLh~ 170 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANL--------------------------------ELVKHLVKHG-SNR---LYGDNMGESCLVK 170 (327)
T ss_dssp CSTTCCCHHHHHHHTTCH--------------------------------HHHHHHHHTT-CCT---TBCCTTCCCHHHH
T ss_pred cCCCCCcHHHHHHHcCCH--------------------------------HHHHHHHHcC-CCC---CCcCCCCCCHHHH
Confidence 577788888887766543 4488888883 433 3478889999999
Q ss_pred HHHhCc---HHHHHHHHHhhCCCCcccccCCCChHHHHHHH----cCCHHHHHHHHcCCcc-------------------
Q 041572 90 AAKFGI---YEIVMEIIISYFPWSLSFSNEDGDDIFHAAVK----HRQENVFNIIFNMPKA------------------- 143 (313)
Q Consensus 90 Aa~~G~---~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~iv~~Ll~~~~~------------------- 143 (313)
|+..|+ .++++.|++. ....++.+|..|+||||+|+. .|+.+++++|++.+..
T Consensus 171 A~~~g~~~~~~~~~~ll~~-~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDY-LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHH-HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------
T ss_pred HHHhcccccHHHHHHHHHh-hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccC
Confidence 999888 6788888887 456788889999999999998 8899999988865310
Q ss_pred -c---------------------ccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhH
Q 041572 144 -Q---------------------TFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTE 200 (313)
Q Consensus 144 -~---------------------~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~ 200 (313)
. +.++|.+|.+|+||||+|++.|+. .+...+++...+ ....|++|+||+++|.+
T Consensus 250 ~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~Gad--~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI-SIVDALLDYGAD--PFIANKSGLRPVDFGAG 325 (327)
T ss_dssp ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCH-HHHHHHHHTTCC--TTCCCTTSCCGGGGTCC
T ss_pred CcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC--CcccCCCCCCHHHHHHh
Confidence 0 004788889999999999999887 344444443333 33448889999998865
No 43
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=1.2e-21 Score=156.31 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=100.1
Q ss_pred hhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC
Q 041572 78 ETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN 157 (313)
Q Consensus 78 ~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 157 (313)
.+|.+|+||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK----ALVNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CcccCcCCCCCC
Confidence 3788999999999999999999999998 7888999999999999999999999999999998 789999999999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|||+|++.|+. .+...+++.. ......|.+|.||+++|.+..
T Consensus 79 ~L~~A~~~~~~-~~v~~Ll~~g--a~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 79 PLHDAAKNGHV-DIVKLLLSYG--ASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTSCCGGGGCCCHH
T ss_pred HHHHHHHcCCH-HHHHHHHHcC--CCCCCCCCCCCCHHHHHhhcc
Confidence 99999999987 3434444332 233444999999999997654
No 44
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=6.3e-22 Score=157.88 Aligned_cols=121 Identities=9% Similarity=0.027 Sum_probs=99.1
Q ss_pred CCCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCC
Q 041572 5 PHLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLK 84 (313)
Q Consensus 5 ~~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~ 84 (313)
+++...|.+|.||||.|++.+... +++.|+++ ..++ +.+|..|+
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~--------------------------------~v~~Ll~~-g~~~---~~~~~~g~ 46 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVE--------------------------------TVRQLLEA-GADP---NALNRFGR 46 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHH--------------------------------HHHHHHHT-TCCT---TCCCTTCC
T ss_pred CCccCCCCCCccHHHHHHHcCCHH--------------------------------HHHHHHHc-CCCc---CCcCCCCC
Confidence 356778888999999988765433 37778777 3333 34678899
Q ss_pred cHHHHHHHhCcHHHHHHHHHhhCCCCcccccCC-CChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHH
Q 041572 85 KPMFTAAKFGIYEIVMEIIISYFPWSLSFSNED-GDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAA 163 (313)
Q Consensus 85 tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa 163 (313)
||||+|+. |+.++++.|++. +.+++.+|.. |+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+
T Consensus 47 t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~ 119 (136)
T 1d9s_A 47 RPIQVMMM-GSAQVAELLLLH--GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG----ARLDVCDAWGRLPVDLAE 119 (136)
T ss_dssp TTTTTSTT-SCHHHHHHHHHH--TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC----CCCCCCSSSSSCHHHHHH
T ss_pred CHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHHHH
Confidence 99999999 999999999988 7778888888 899999999999999999999888 678889999999999999
Q ss_pred hcCCC
Q 041572 164 RSVPS 168 (313)
Q Consensus 164 ~~~~~ 168 (313)
+.++.
T Consensus 120 ~~~~~ 124 (136)
T 1d9s_A 120 EQGHR 124 (136)
T ss_dssp HHTCH
T ss_pred HcCCH
Confidence 88875
No 45
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=2e-21 Score=171.95 Aligned_cols=176 Identities=15% Similarity=0.084 Sum_probs=99.7
Q ss_pred CCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcH
Q 041572 11 NADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 11 n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
+..|.||||.|+..+.... ..+.++.+..+...+....+..|.++. ++++.|+++ ..+. +.+|..|+||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~---~~~~~~g~t~ 108 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDI---VELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK-GADV---NECDFYGFTA 108 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHH---HHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCT---TCBCTTCCBH
T ss_pred CCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC---CccCcccCCH
Confidence 6677788888887776554 222223333333333334444454442 667777776 2332 2355667777
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccc----------cCCCChHHHHHHHcCCHHHHHHHHcC-CcccccccccccCCC
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFS----------NEDGDDIFHAAVKHRQENVFNIIFNM-PKAQTFFVADIDVKG 155 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~----------d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~in~~d~~G 155 (313)
||+|+..|+.++++.|++. +..++.+ +..|+||||+|+..|+.+++++|++. + .+++.+|..|
T Consensus 109 L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g 182 (285)
T 1wdy_A 109 FMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG----ADVNACDNMG 182 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHT--TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSC----CCTTCCCTTS
T ss_pred HHHHHHhCCHHHHHHHHHh--CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcC----CCCCccCCCC
Confidence 7777777777777777766 4445544 56667777777777777777777665 4 4566666667
Q ss_pred CCHHHHHHhcCCCCC---cchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 156 VNILHSAARSVPSSE---VSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 156 ~TpLH~Aa~~~~~~~---i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
+||||+|+..++... +...+++. .......|..|.||+++|.+.
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLDH--GADVNVRGERGKTPLILAVEK 229 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHHT--TCCSSCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHccccchHHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHc
Confidence 777777766665311 11122221 222223355666666666554
No 46
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.84 E-value=7.9e-22 Score=183.76 Aligned_cols=185 Identities=11% Similarity=0.070 Sum_probs=139.3
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+-..|.+|.||||+|+..+.... ..++++.+..+...+....+..|.++. ++++.|+++ .....+.+.+|..
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~i---v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~ 234 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRL---VAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS-TKLKGDIEELDRN 234 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHH---HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS-HHHHHTTSCCCTT
T ss_pred CcCCCCCCCCHHHHHHHcChHHH---HHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc-CccccChhhcCCC
Confidence 34568899999999999887765 333334444444444445556666654 889999887 2111123447889
Q ss_pred CCcHHHHHHHhC---cHHHHHHHHHhhCCCCccc--------ccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccc
Q 041572 83 LKKPMFTAAKFG---IYEIVMEIIISYFPWSLSF--------SNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADI 151 (313)
Q Consensus 83 g~tpLh~Aa~~G---~~~~v~~Ll~~~~~~~~~~--------~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~ 151 (313)
|.||||+|+..| +.++++.|++. +..++. +|..|+||||+|+..|+.+++++|++.+. +++|.+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~--g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~---~~~n~~ 309 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEK--GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG---SNKDKQ 309 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHH--TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC---CCTTCC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHC--CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC---CCccCc
Confidence 999999999998 99999999998 666654 67799999999999999999999997652 688999
Q ss_pred cCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 152 DVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 152 d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|.+|+||||+|+..|+. .+...+++... .....|..|.||+++|.+...
T Consensus 310 d~~g~TpL~~A~~~g~~-~iv~~Ll~~ga--d~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRI-EVVMYLIQQGA--SVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp CTTCCCHHHHHHHHTCH-HHHHHHHHTTC--CSSCCCSSSCCHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHcCCH-HHHHHHHHcCC--CccCCCCCCCCHHHHHHHcCC
Confidence 99999999999999987 34444444332 233348999999999988643
No 47
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=3.5e-22 Score=163.13 Aligned_cols=145 Identities=8% Similarity=-0.070 Sum_probs=100.8
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcH
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
....++.|.|+||.|++.+... +++.|+++ ..++ +.+|..|+||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~--------------------------------~v~~Ll~~-g~~~---~~~~~~g~t~ 48 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVE--------------------------------EVRALLEA-GANP---NAPNSYGRRP 48 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHH--------------------------------HHHHHHTT-TCCT---TCCCSSSCCT
T ss_pred ccCCCccchHHHHHHHHcCCHH--------------------------------HHHHHHHc-CCCC---CCCCCCCCCH
Confidence 3456778889999888665443 37888887 3333 3477889999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCCh-HHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhc
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDD-IFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t-~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
||+|+ .|+.++++.|++. +.+++.+|..|+| |||+|+..|+.+++++|++.+ +++|.+|.+|+||||+|+..
T Consensus 49 L~~A~-~~~~~~v~~Ll~~--g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 49 IQVMM-MGSARVAELLLLH--GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG----ARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp TTSSC-TTCHHHHHHHHTT--TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT----CCSSCCCTTCCCHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC----CCCcccCCCCCCHHHHHHHh
Confidence 99985 8999999999988 7888999999999 999999999999999999988 78899999999999999999
Q ss_pred CCCCCcchHHhhhhHHhhhhhhcCCCCChhhh
Q 041572 166 VPSSEVSGAALQMQRELQWFKLNDKDKTPREL 197 (313)
Q Consensus 166 ~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dl 197 (313)
|+. .+...+++...+ ....|..|.||.+-
T Consensus 122 ~~~-~~v~~Ll~~ga~--~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 122 GHR-DVARYLRAAAGG--TRGSNHARIDAAEG 150 (156)
T ss_dssp TCH-HHHHHHSSCC------------------
T ss_pred CHH-HHHHHHHHcCCC--CCccCcCcCccccc
Confidence 887 333444443333 33337788887663
No 48
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.84 E-value=8.7e-22 Score=171.58 Aligned_cols=99 Identities=11% Similarity=0.066 Sum_probs=87.2
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..++ +.+|..|+||||+||..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 35 ~~v~~Ll~~-g~~~---~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 108 (229)
T 2vge_A 35 EVVQQAVKE-MNDP---SQPNEEGITALHNAICGANYSIVDFLITA--GANVNSPDSHGWTPLHCAASCNDTVICMALVQ 108 (229)
T ss_dssp HHHHHHHHH-SSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHhc-CCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 448888887 3333 44788999999999999999999999998 88899999999999999999999999999999
Q ss_pred CCccccccccccc-CCCCCHHHHH--HhcCCC
Q 041572 140 MPKAQTFFVADID-VKGVNILHSA--ARSVPS 168 (313)
Q Consensus 140 ~~~~~~~~in~~d-~~G~TpLH~A--a~~~~~ 168 (313)
.+ ++++.+| .+|+||||+| +..|+.
T Consensus 109 ~g----a~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 109 HG----AAIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp TT----CCTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred cC----CCcccccCCCCCCHHHHHHHHhcChH
Confidence 98 7888887 6999999999 777766
No 49
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=5.4e-21 Score=167.11 Aligned_cols=178 Identities=12% Similarity=0.066 Sum_probs=112.3
Q ss_pred CCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcH
Q 041572 11 NADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 11 n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
+..|.||||.|++.+.... ....++.+...... -......|.++. ++++.|+++ ..+. +.+|..|+||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~---~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~---~~~d~~g~t~ 73 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKT---GSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYE-VDDP---SLPNDEGITA 73 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTST-TSSC---CCCCTTSCCH
T ss_pred CccccccCchhhhhhhHHH---HHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHc-CCCC---CCcCCCCCCH
Confidence 3469999999999877765 22233433332211 112333444443 789999988 3333 4478899999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCC-CHHHHH--H
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGV-NILHSA--A 163 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~-TpLH~A--a 163 (313)
||+||..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+ ++++.+|..|. ||||+| +
T Consensus 74 L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQF--GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG----AAVFAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCSSSCCCHHHHCCSS
T ss_pred HHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCcceecCCCCcchHHHHHHh
Confidence 9999999999999999998 8889999999999999999999999999999998 78899998887 999999 6
Q ss_pred hcCCCCCcchHHhhhhHHhhhhh-------hcCCCCChhhhhhHhhh
Q 041572 164 RSVPSSEVSGAALQMQRELQWFK-------LNDKDKTPRELFTEEHK 203 (313)
Q Consensus 164 ~~~~~~~i~~~~l~~~~~l~~~~-------~n~~G~Tp~dla~~~~~ 203 (313)
..|+. .+...+++...+..... .+..|.+|.+++.+...
T Consensus 148 ~~g~~-~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 148 EEGYT-QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp STTCC-CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhccH-HHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 77776 44445555444433211 16778999998877554
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=2.3e-21 Score=154.53 Aligned_cols=118 Identities=9% Similarity=0.108 Sum_probs=103.1
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
.+|.+|.||||.|+..+.. ++++.|+++ ..+. +.+|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~--------------------------------~~~~~Ll~~-g~~~---~~~~~~g~t~L~ 48 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDI--------------------------------PSVEYLLQN-GSDP---NVKDHAGWTPLH 48 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCH--------------------------------HHHHHHHHT-TCCS---CCCCTTSCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCH--------------------------------HHHHHHHHc-CCCC---CcCCCCCCCHHH
Confidence 6789999999999876543 337888887 3333 347889999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..+..
T Consensus 49 ~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpl~~A~~~~~~ 122 (137)
T 3c5r_A 49 EACNHGHLKVVELLLQH--KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG----ASRNAVNIFGLRPVDYTDDESMK 122 (137)
T ss_dssp HHHHTTCHHHHHHHHHT--TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCGGGGCCCHHHH
T ss_pred HHHHcCCHHHHHHHHHc--CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCCHHHHHhhccHH
Confidence 99999999999999998 8889999999999999999999999999999998 78999999999999999876643
No 51
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.84 E-value=2.4e-21 Score=173.99 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=132.8
Q ss_pred CCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 6 HLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 6 ~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
++-.+|.+|.||||.|+..|..... .++++.+..+... .+.+..|.++. ++++.|+++ ..++ +.+|.
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v---~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~---~~~d~ 93 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLV---CTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFS-GLDD---SQFDD 93 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHH---HHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHT-TCCT---TCCCT
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHH---HHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHC-CCCC---CCcCC
Confidence 3457889999999999998887652 2222332222111 23445555543 889999998 3443 34788
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCC-ChHHHHHHHcCCHHHHHHHHcCCcccccccccccC-CCCCHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDG-DDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDV-KGVNIL 159 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G-~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~-~G~TpL 159 (313)
.|+||||+|+..|+.++++.|++. +.+++.+|..| +||||+|+..|+.+++++|++.+. .. .|. .|.|||
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~----~~--~~~~~g~t~L 165 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKK--NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP----ST--FDLAILLSCI 165 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC----TT--CCCSTHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhc--CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC----cc--ccccCCccHH
Confidence 999999999999999999999999 88899999999 799999999999999999999883 22 333 899999
Q ss_pred HHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCCh-hhhhhHhh
Q 041572 160 HSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTP-RELFTEEH 202 (313)
Q Consensus 160 H~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp-~dla~~~~ 202 (313)
|+|+..|+. .+...+++... .....|..|.|| +++|.+..
T Consensus 166 ~~A~~~g~~-~~v~~Ll~~ga--d~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 166 HITIKNGHV-DMMILLLDYMT--STNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHHHTTCH-HHHHHHHHHHH--HTCTTCCCBCCTTHHHHHHHT
T ss_pred HHHHHcChH-HHHHHHHHcCC--CCCcccCCCCChHHHHHHHcC
Confidence 999999987 34444444433 344458899998 99998764
No 52
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=173.33 Aligned_cols=178 Identities=13% Similarity=-0.032 Sum_probs=123.0
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCch--------hHhhhhhccccHHH-----HHHHHHHHhccccccch
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPS--------IKSIRNTKLTHKQT-----LEILRIICVGAVDIATA 75 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~k~~~~~~-----~~il~~l~~~~~~~~~~ 75 (313)
-+|.++.++|+.|+..|.... ..++++.+..+. ..+.......+..+ .++++.|++.+ .++
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~---v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G-adv-- 79 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEM---VRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASG-LGV-- 79 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHH---HHHHHTCC----------------------------------------CC-CCT--
T ss_pred ccCccchhHHHHHHHcCCHHH---HHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCC-CCC--
Confidence 356678899999999988765 222333322111 11111222223222 24677777773 333
Q ss_pred hhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCC
Q 041572 76 AKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKG 155 (313)
Q Consensus 76 ~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 155 (313)
+.+|.+|+||||+||..|+.++++.|++. +.+++.++..|+||+|+|+..++.+++++|++.+ +++|.+|.+|
T Consensus 80 -n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g----~~~n~~d~~g 152 (269)
T 4b93_B 80 -NVTSQDGSSPLHVAALHGRADLIPLLLKH--GANAGARNADQAVPLHLACQQGHFQVVKCLLDSN----AKPNKKDLSG 152 (269)
T ss_dssp -TCCCTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCSCCCCTTC
T ss_pred -CCcCCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCccCCCCCCccccccccChHHHHHHHHHCC----CCCCCCCCCC
Confidence 45889999999999999999999999998 7888999999999999999999999999999998 7899999999
Q ss_pred CCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 156 VNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 156 ~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+||||+|++.|+. .+...+++... .....|..|.||+++|....
T Consensus 153 ~TpL~~A~~~g~~-~~v~~Ll~~ga--dvn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 153 NTPLIYACSGGHH-ELVALLLQHGA--SINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp CCHHHHHHHTTCG-GGHHHHHHTTC--CTTCBCTTSCBHHHHHHHTT
T ss_pred CCHHHHHHHCCCH-HHHHHHHHCCC--CCCccccCCCcHHHHHHHcC
Confidence 9999999999998 44445554433 33444889999999998654
No 53
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=6.5e-21 Score=180.34 Aligned_cols=114 Identities=17% Similarity=0.127 Sum_probs=61.3
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
++..|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++.+ +++|.+|..|+||
T Consensus 241 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~ 314 (437)
T 1n11_A 241 ESVQGVTPLHLAAQEGHAEMVALLLSK--QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG----VMVDATTRMGYTP 314 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT----CCTTCCCSSCCCH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC----ccCCCCCCCCCCH
Confidence 444555555555555555555555555 4445555555556666666555555555555555 4555566666666
Q ss_pred HHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHh
Q 041572 159 LHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 159 LH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
||+|+..|+. .+...+++...+ ....|+.|.||+++|.+.
T Consensus 315 L~~A~~~g~~-~~v~~Ll~~gad--~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 315 LHVASHYGNI-KLVKFLLQHQAD--VNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHHHHSSCS-HHHHHHHHTTCC--TTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCcH-HHHHHHHhcCCC--CCCCCCCCCCHHHHHHHC
Confidence 6666666555 222233322211 222355566666666554
No 54
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=6.2e-21 Score=164.73 Aligned_cols=178 Identities=15% Similarity=0.067 Sum_probs=128.5
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHH----HHHHHHHHhccccccchhhhhcCCCCc
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQT----LEILRIICVGAVDIATAAKETENVLKK 85 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~----~~il~~l~~~~~~~~~~~~~~d~~g~t 85 (313)
++..++|+||.|++.|........... .+.. ....+....+..|.++ .++++.|+++ .... +.+|..|+|
T Consensus 2 e~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~---~~~~~~g~t 75 (231)
T 3aji_A 2 EGCVSNIMICNLAYSGKLDELKERILA-DKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQL-GVPV---NDKDDAGWS 75 (231)
T ss_dssp -CCCSSSHHHHHHHHTCHHHHHHHHHH-CGGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCS---CCCCTTSCC
T ss_pred CCccccchHHHHHHhCCHHHHHHHHHh-chhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCC---CCcCCCCCC
Confidence 455689999999998876552221110 0000 0111222334445544 3789999988 3433 337788999
Q ss_pred HHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhc
Q 041572 86 PMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 86 pLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
|||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVK--GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG----ANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCcHHHHHHHc
Confidence 99999999999999999998 7788899999999999999999999999999988 67889999999999999999
Q ss_pred CCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 166 VPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 166 ~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|+. .+...+++... .....|.+|.||+++|.+..
T Consensus 150 ~~~-~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 150 GNL-KMVHILLFYKA--STNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp TCH-HHHHHHHHTTC--CSCCCCTTSCCHHHHHHHTT
T ss_pred CCH-HHHHHHHhcCC--CccccCCCCCCHHHHHHHCC
Confidence 987 33333333222 22334888999999997654
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=162.19 Aligned_cols=183 Identities=13% Similarity=0.083 Sum_probs=131.1
Q ss_pred CCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 6 HLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 6 ~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
|+...|+.|.|+|+.|++.|..... ..+++.+......+....+..|.++. ++++.|++++ ...+ ...+.
T Consensus 1 h~~~~d~~~~~~l~~A~~~g~~~~~---~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~--~~~~~ 74 (240)
T 3eu9_A 1 HMTHIDDYSTWDIVKATQYGIYERC---RELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG-AIVD--QLGGD 74 (240)
T ss_dssp -CCCCSCGGGCCHHHHHHTTCHHHH---HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTT--CCBTT
T ss_pred CccccccccchHHHHHHHcCChHHH---HHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC-Ccch--hhcCC
Confidence 4566788999999999998887662 22333333333333344445555543 7899999883 3332 22445
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHS 161 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~ 161 (313)
.|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|.||||+
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~----~~~~~~~~~g~t~l~~ 148 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKY--GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG----QDVDMMDQNGMTPLMW 148 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC----CCccccCCCCCcHHHH
Confidence 689999999999999999999988 7788889999999999999999999999999988 6788999999999999
Q ss_pred HHhcCCCCCcchHHhhhhHHhhhhhhcC-CCCChhhhhhHhh
Q 041572 162 AARSVPSSEVSGAALQMQRELQWFKLND-KDKTPRELFTEEH 202 (313)
Q Consensus 162 Aa~~~~~~~i~~~~l~~~~~l~~~~~n~-~G~Tp~dla~~~~ 202 (313)
|+..++...+...+++...+ ....+. .|.||+++|....
T Consensus 149 a~~~~~~~~~~~~L~~~~~~--~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 149 AAYRTHSVDPTRLLLTFNVS--VNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp HHHHCCSSTTHHHHHHTTCC--TTCCCTTTCCCHHHHHHHHT
T ss_pred HHHhCChHHHHHHHHhcCCC--cchhhccCCCcHHHHHHHcC
Confidence 99877743343333332222 222243 7888888887654
No 56
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.83 E-value=1e-20 Score=172.55 Aligned_cols=179 Identities=12% Similarity=0.048 Sum_probs=93.8
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENV 82 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~ 82 (313)
+..+|.+|.||||+|+..|.... ..++++.+..+...+....+..|.++. ++++.|+++ ..+. +.+|..
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~---~~~~~~ 123 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRI---VQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH-GACV---NAMDLW 123 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHH---HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCT---TCCCTT
T ss_pred cccCCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHC-CCCC---CCCCCC
Confidence 34456677777777777665544 122222222222222233334444432 566666665 2222 224556
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccc------------------------------------------------
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFS------------------------------------------------ 114 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~------------------------------------------------ 114 (313)
|+||||+|+..|+.++++.|++. +..++..
T Consensus 124 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 201 (351)
T 3utm_A 124 QFTPLHEAASKNRVEVCSLLLSH--GADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALE 201 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhh
Confidence 66666666666666666666665 3333322
Q ss_pred ------cCCCChHHHHHHHc---CCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhh
Q 041572 115 ------NEDGDDIFHAAVKH---RQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWF 185 (313)
Q Consensus 115 ------d~~G~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~ 185 (313)
+..|+||||+|+.. ++.+++++|++.+ +++|.+|.+|+||||+|++.|+. .+...+++.. ....
T Consensus 202 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g--a~~n 274 (351)
T 3utm_A 202 IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG----ANVNEKNKDFMTPLHVAAERAHN-DVMEVLHKHG--AKMN 274 (351)
T ss_dssp CTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT--CCTT
T ss_pred cccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC----CCcCCcCCCCCCHHHHHHHcCCH-HHHHHHHHCC--CCCC
Confidence 23455666666666 3355666666665 45666666666666666666665 2222333222 1222
Q ss_pred hhcCCCCChhhhhhHh
Q 041572 186 KLNDKDKTPRELFTEE 201 (313)
Q Consensus 186 ~~n~~G~Tp~dla~~~ 201 (313)
..|..|.||+++|.+.
T Consensus 275 ~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 275 ALDSLGQTALHRAALA 290 (351)
T ss_dssp CCCTTSCCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHc
Confidence 2366667777766654
No 57
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=6.1e-21 Score=149.34 Aligned_cols=112 Identities=15% Similarity=0.039 Sum_probs=93.7
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHH
Q 041572 80 ENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNIL 159 (313)
Q Consensus 80 d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 159 (313)
+..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ +++|.+|.+|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG----ADINAPDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT----CCTTCCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCcCCCCCCCHH
Confidence 45688999999999999999999998 7788999999999999999999999999999988 78999999999999
Q ss_pred HHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhH
Q 041572 160 HSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTE 200 (313)
Q Consensus 160 H~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~ 200 (313)
|+|+..++. .+...+++...+ ....|.+|.||+++|..
T Consensus 78 ~~A~~~~~~-~~v~~Ll~~ga~--~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 78 LSAVYEGHV-SCVKLLLSKGAD--KTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHTCH-HHHHHHHHTTCC--TTCCCTTSCCHHHHCCC
T ss_pred HHHHHcCCH-HHHHHHHHcCCC--CCCcCCCCCCHHHHhCC
Confidence 999999987 343444443322 33448999999999953
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.83 E-value=8.1e-21 Score=160.49 Aligned_cols=152 Identities=12% Similarity=0.046 Sum_probs=122.2
Q ss_pred CCCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 6 HLHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 6 ~~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
++-..|.+|.||||.|++.+.... ..+.++.+..+...+....+..|.++. ++++.|+++.... .+.+|.
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~ 104 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEI---AKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPD---LNKHNR 104 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHH---HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC---TTCCCT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcc---cccccC
Confidence 345678899999999999887655 333334444444344444555565553 8899998652222 344788
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC-----HHHHHHHHcCCcccccccccccCCCC
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ-----ENVFNIIFNMPKAQTFFVADIDVKGV 156 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~-----~~iv~~Ll~~~~~~~~~in~~d~~G~ 156 (313)
.|.||||+|+..|+.++++.|++. .+.+++.+|..|+||||+|+..++ .+++++|++.| ++++.+|.+|+
T Consensus 105 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g----a~~~~~~~~g~ 179 (201)
T 3hra_A 105 YGGNALIPAAEKGHIDNVKLLLED-GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG----ADQSIKDNSGR 179 (201)
T ss_dssp TSCCSHHHHHHTTCHHHHHHHHHH-CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT----CCTTCCCTTSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC----CCCCccCCCCC
Confidence 999999999999999999999999 558899999999999999999998 99999999998 78999999999
Q ss_pred CHHHHHHhcCCC
Q 041572 157 NILHSAARSVPS 168 (313)
Q Consensus 157 TpLH~Aa~~~~~ 168 (313)
||||+|++.|+.
T Consensus 180 t~l~~A~~~~~~ 191 (201)
T 3hra_A 180 TAMDYANQKGYT 191 (201)
T ss_dssp CHHHHHHHHTCH
T ss_pred CHHHHHHHcCCH
Confidence 999999999986
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=1.8e-20 Score=152.15 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=90.1
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..+. +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++
T Consensus 48 ~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 48 STTEVLLRA-GVSR---DARTKVDRTPLHMAASEGHANIVEVLLKH--GADVNAKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp HHHHHHHTT-TCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCC---CCCCCCCCCHHHHHHHcChHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 668899888 3333 34788999999999999999999999998 88899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
.+ ++++.+|.+|+||||+|+..|+.
T Consensus 122 ~g----a~~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 122 YG----ADVHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp TT----CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cC----CCccccCCCCCCHHHHHHHcCCH
Confidence 98 78999999999999999999976
No 60
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=6e-21 Score=152.16 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=55.1
Q ss_pred HHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCC
Q 041572 62 LRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMP 141 (313)
Q Consensus 62 l~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 141 (313)
++.|+++ ..++ +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 30 v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 103 (136)
T 2jab_A 30 VRILMAN-GADV---NAKDEYGLTPLYLATAHGHLEIVEVLLKN--GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103 (136)
T ss_dssp HHHHHHT-TCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHc-CCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5555555 2222 22455566666666666666666666655 4555555666666666666666666666666555
Q ss_pred cccccccccccCCCCCHHHHHHhcCCC
Q 041572 142 KAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 142 ~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
++++.+|.+|+||||+|++.|+.
T Consensus 104 ----~~~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 104 ----ADVNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp ----CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ----CCCcCcCCCCCCHHHHHHHCCCH
Confidence 45555666666666666655544
No 61
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=162.15 Aligned_cols=181 Identities=13% Similarity=0.028 Sum_probs=135.8
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCch-hHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPS-IKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
+...+.+|.||||.|++.+..... .++++.+.... .......+..|.++. ++++.|++.+ ... +.+|.
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v---~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~---~~~~~ 107 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLV---KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG-ADP---SLIDG 107 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHH---HHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT-CCT---TCCCT
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHH---HHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC-CCC---cccCC
Confidence 456788999999999999876652 22223222211 111123344454443 7899999883 333 34788
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC-HHHHHHHHcCCcccccccccccC-CCCCHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ-ENVFNIIFNMPKAQTFFVADIDV-KGVNIL 159 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~-~~iv~~Ll~~~~~~~~~in~~d~-~G~TpL 159 (313)
.|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..++ .+++++|++.+ .+++.++. .|+|||
T Consensus 108 ~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~----~~~~~~~~~~g~t~L 181 (240)
T 3eu9_A 108 EGCSCIHLAAQFGHTSIVAYLIAK--GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN----VSVNLGDKYHKNTAL 181 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT----CCTTCCCTTTCCCHH
T ss_pred CCCCHHHHHHHcCHHHHHHHHHhc--CCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC----CCcchhhccCCCcHH
Confidence 999999999999999999999998 77889999999999999997776 89999999998 68888887 999999
Q ss_pred HHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 160 HSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 160 H~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|+|+..|+. .+...+++.. ......|.+|.||+++|.+...
T Consensus 182 ~~A~~~~~~-~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 182 HWAVLAGNT-TVISLLLEAG--ANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp HHHHHHTCH-HHHHHHHHHT--CCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHHHcCCH-HHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCc
Confidence 999999987 3333444332 3334448999999999988643
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=2.8e-20 Score=151.97 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=89.8
Q ss_pred HHHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHH
Q 041572 59 LEILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIF 138 (313)
Q Consensus 59 ~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll 138 (313)
.++++.|+++ ..+. +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|+
T Consensus 50 ~~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 50 PEIARRLLLR-GANP---DLKDRTGFAVIHDAARAGFLDTLQTLLEF--QADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp HHHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHc-CCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3678899888 3333 34788999999999999999999999998 7889999999999999999999999999999
Q ss_pred cCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 139 NMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 139 ~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+.+. ..++.+|.+|.||||+|+..|+.
T Consensus 124 ~~g~---~~~~~~~~~g~t~l~~A~~~~~~ 150 (162)
T 1ihb_A 124 KHTA---SNVGHRNHKGDTACDLARLYGRN 150 (162)
T ss_dssp HHSC---CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HccC---CCCCCcCCCCCcHHHHHHHcCCH
Confidence 9883 23689999999999999999986
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=2.5e-20 Score=164.85 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=42.5
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC----HHHHHHHHcCCcccccccccccCCC
Q 041572 80 ENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ----ENVFNIIFNMPKAQTFFVADIDVKG 155 (313)
Q Consensus 80 d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~----~~iv~~Ll~~~~~~~~~in~~d~~G 155 (313)
+..|.||||+|+..|+.++++.|++. .+..++.+|..|+||||+|+..++ .+++++|++.+ +++|.+|.+|
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g----~~~~~~~~~g 219 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDE-MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG----ADVNVRGERG 219 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT----CCSSCCCTTS
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHh-cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC----CCCCCcCCCC
Confidence 34455555555555555555555544 444445555555555555555555 44555555544 3445555555
Q ss_pred CCHHHHHHhcCCC
Q 041572 156 VNILHSAARSVPS 168 (313)
Q Consensus 156 ~TpLH~Aa~~~~~ 168 (313)
+||||+|++.|+.
T Consensus 220 ~t~L~~A~~~~~~ 232 (285)
T 1wdy_A 220 KTPLILAVEKKHL 232 (285)
T ss_dssp CCHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCH
Confidence 5555555555443
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=3.3e-20 Score=152.53 Aligned_cols=120 Identities=9% Similarity=-0.006 Sum_probs=105.5
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcH
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
+-..|.+|.||||.|+..+.. ++++.|+++ ..+. +.+|..|.||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~--------------------------------~~v~~Ll~~-g~~~---~~~~~~g~t~ 72 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQI--------------------------------AVVEFLLQN-GADP---QLLGKGRESA 72 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCH--------------------------------HHHHHHHHT-TCCT---TCCCTTCCCH
T ss_pred cCCCCCCCCCHHHHHHHCCCH--------------------------------HHHHHHHHc-CCCC---CCcCCCCCcH
Confidence 556788999999999876543 348888888 3333 3477899999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcC
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSV 166 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 166 (313)
||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|.||||+|+..|
T Consensus 73 L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDC--GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG----ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHC--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999 8889999999999999999999999999999988 788999999999999999999
Q ss_pred CC
Q 041572 167 PS 168 (313)
Q Consensus 167 ~~ 168 (313)
+.
T Consensus 147 ~~ 148 (167)
T 3v31_A 147 YR 148 (167)
T ss_dssp CH
T ss_pred cH
Confidence 87
No 65
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=9e-21 Score=166.49 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=95.0
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCccccc-CCCChHHHHHHHcCCHHHHHHHH
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSN-EDGDDIFHAAVKHRQENVFNIIF 138 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~iv~~Ll 138 (313)
++++.|++. .+.+.+|..|+||||+||..|+.++++.|++. +.+++.+| ..|+||||+|+.+|+.+++++|+
T Consensus 59 ~~v~~Ll~~-----~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 131 (244)
T 3ui2_A 59 QALSQLLED-----RDVDAVDENGRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALHMAAGYVRPEVVEALV 131 (244)
T ss_dssp HHHHHTTTT-----CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcC-----CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 567777763 23344788999999999999999999999998 78888888 78999999999999999999999
Q ss_pred cCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 139 NMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 139 ~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+.+ +++|.+|.+|+||||+|+..++ +..|.||++.+.+..
T Consensus 132 ~~g----a~~~~~d~~g~t~l~~A~~~~~--------------------~~~~~~~l~~a~~~g 171 (244)
T 3ui2_A 132 ELG----ADIEVEDERGLTALELAREILK--------------------TTPKGNPMQFGRRIG 171 (244)
T ss_dssp HTT----CCTTCCCTTCCCHHHHHHHHHT--------------------TCCCSSHHHHHHHHH
T ss_pred HCC----CCCCCCCCCCCcHHHHHHHHHh--------------------ccCCCCHHHHHHHcC
Confidence 998 7899999999999999997654 345788888877643
No 66
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=7e-21 Score=159.58 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=72.5
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCccccc-CCCChHHHHHHHcCCHHHHHHHH
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSN-EDGDDIFHAAVKHRQENVFNIIF 138 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~iv~~Ll 138 (313)
++++.|++. .+.+.+|..|+||||+|+..|+.++++.|++. +.+++.+| ..|+||||+|+..|+.+++++|+
T Consensus 58 ~~v~~Ll~~-----~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 130 (183)
T 3deo_A 58 QALSQLLED-----RDVDAVDENGRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALHMAAGYVRPEVVEALV 130 (183)
T ss_dssp HHHHHHTTT-----SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhc-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHH
Confidence 456666652 12234677788888888888888888888877 66677777 77888888888888888888888
Q ss_pred cCCcccccccccccCCCCCHHHHHHhcCC
Q 041572 139 NMPKAQTFFVADIDVKGVNILHSAARSVP 167 (313)
Q Consensus 139 ~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 167 (313)
+.+ ++++.+|.+|+||||+|++.++
T Consensus 131 ~~g----a~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 131 ELG----ADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HHT----CCTTCCCTTSCCHHHHHHHHHH
T ss_pred HcC----CCCcCCCCCCCCHHHHHHHhcc
Confidence 877 6777888888888888877654
No 67
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.1e-20 Score=147.78 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=84.8
Q ss_pred HHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcC
Q 041572 61 ILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNM 140 (313)
Q Consensus 61 il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~ 140 (313)
+++.|+++ ..++ +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.
T Consensus 22 ~v~~ll~~-~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 22 EVKDYVAK-GEDV---NRTLEGGRKPLHYAADCGQLEILEFLLLK--GADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHHHT-TCCT---TSCCTTSSCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHc-CCCc---CccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 37788887 3333 44788999999999999999999999988 888999999999999999999999999999999
Q ss_pred CcccccccccccCCCCCHHHHHHhc
Q 041572 141 PKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 141 ~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
+ ++++.+|.+|+||||+|+..
T Consensus 96 g----a~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 96 G----ADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp T----CCTTCCCTTSCCHHHHCCCH
T ss_pred C----CCCCCcCCCCCCHHHHhCCH
Confidence 8 78999999999999999544
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.82 E-value=3.5e-20 Score=156.05 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=105.2
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcH
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
+...|.+|.||||.|+..+.. ++++.|+++ ..++ +.+|..|.||
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~--------------------------------~~v~~Ll~~-g~~~---~~~~~~g~t~ 104 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRL--------------------------------GIAEKLLSK-GSNV---NTKDFSGKTP 104 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCH--------------------------------HHHHHHHHH-TCCT---TCCCTTSCCH
T ss_pred cccccccCccHHHHHHHcCCH--------------------------------HHHHHHHHC-CCCC---CCCCCCCCcH
Confidence 445788899999999866443 348888887 3333 3478899999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcC
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSV 166 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 166 (313)
||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|.||||+|+..|
T Consensus 105 L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEH--GANVNDRNLEGETPLIVASKYGRSEIVKKLLELG----ADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHhC
Confidence 9999999999999999998 8889999999999999999999999999999998 789999999999999999999
Q ss_pred CC
Q 041572 167 PS 168 (313)
Q Consensus 167 ~~ 168 (313)
+.
T Consensus 179 ~~ 180 (192)
T 2rfm_A 179 RQ 180 (192)
T ss_dssp CH
T ss_pred cH
Confidence 86
No 69
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=4.2e-21 Score=153.08 Aligned_cols=116 Identities=15% Similarity=0.006 Sum_probs=99.2
Q ss_pred hhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCC-C
Q 041572 77 KETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVK-G 155 (313)
Q Consensus 77 ~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~-G 155 (313)
+.+|..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+. |+.+++++|++.+ +++|.+|.. |
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g----~~~~~~~~~~g 78 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG----AEPNCADPATL 78 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT----CCSSCCBTTTT
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC----CCCCCcCCCCC
Confidence 34788999999999999999999999998 78899999999999999999 9999999999988 789999999 9
Q ss_pred CCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 156 VNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 156 ~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+||||+|+..|+. .+...+++... .....|.+|.||+++|.+..
T Consensus 79 ~t~L~~A~~~~~~-~~v~~Ll~~ga--~~~~~d~~g~tpl~~A~~~~ 122 (136)
T 1d9s_A 79 TRPVHDAAREGFL-DTLVVLHRAGA--RLDVCDAWGRLPVDLAEEQG 122 (136)
T ss_dssp BCHHHHHHHHTCH-HHHHHHHHTCC--CCCCCSSSSSCHHHHHHHHT
T ss_pred CCHHHHHHHcCCH-HHHHHHHHcCC--CCCccCCCCCCHHHHHHHcC
Confidence 9999999999987 33334443322 23334889999999998764
No 70
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=2.7e-20 Score=160.94 Aligned_cols=164 Identities=12% Similarity=0.092 Sum_probs=119.8
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCc-----hhHhhhhhccccHHHH----HHHHHHHhccccccchhh
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPP-----SIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAK 77 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~ 77 (313)
+-..|.+|.||||.|+..+........ ++.+... ...+..+.+..|.++. ++++.|+++ ..+.+...
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~L---l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 105 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVL---MEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARA 105 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHH---HHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHH---HHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCccc
Confidence 456789999999999999877652222 1211111 1122234455565554 899999998 44443211
Q ss_pred ----------hhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHH----HHHHcCCcc
Q 041572 78 ----------ETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVF----NIIFNMPKA 143 (313)
Q Consensus 78 ----------~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv----~~Ll~~~~~ 143 (313)
..|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++ ++|++.+..
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH--GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 1244799999999999999999999998 888999999999999999999999988 999998832
Q ss_pred c--ccccccccCCCCCHHHHHHhcCCCCCcchHHhh
Q 041572 144 Q--TFFVADIDVKGVNILHSAARSVPSSEVSGAALQ 177 (313)
Q Consensus 144 ~--~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~ 177 (313)
. ....+.+|.+|+||||+|++.|+. .+...+++
T Consensus 184 ~~~~~~~~~~~~~g~tpl~~A~~~g~~-~~v~~Ll~ 218 (232)
T 2rfa_A 184 DHLKSLELVPNNQGLTPFKLAGVEGNI-VMFQHLMQ 218 (232)
T ss_dssp CSSCCGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHH
T ss_pred hhhhhhhccCCCCCCCHHHHHHHcCCH-HHHHHHHh
Confidence 1 111268999999999999999987 33334443
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=5.5e-20 Score=151.90 Aligned_cols=148 Identities=13% Similarity=0.087 Sum_probs=113.5
Q ss_pred CCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCC
Q 041572 8 HSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVL 83 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g 83 (313)
...+..+.|+++.|++.|..... .++++.+......+....+..|.++. ++++.|+++ ..+. +.+|..|
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v---~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~---~~~~~~g 80 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEV---RILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKN-GADV---NAVDHAG 80 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHH---HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCT---TCCCTTS
T ss_pred ccCCCcccchHHHHHHcCCHHHH---HHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC---CccCCCC
Confidence 34455667888888887776652 22223333322233334444555543 789999988 3433 3478899
Q ss_pred CcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHH
Q 041572 84 KKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAA 163 (313)
Q Consensus 84 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa 163 (313)
.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|.||||+|+
T Consensus 81 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 81 MTPLRLAALFGHLEIVEVLLKN--GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG----ADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999998 8889999999999999999999999999999998 788999999999999999
Q ss_pred hcCCC
Q 041572 164 RSVPS 168 (313)
Q Consensus 164 ~~~~~ 168 (313)
+.|+.
T Consensus 155 ~~~~~ 159 (169)
T 2y1l_E 155 DNGNE 159 (169)
T ss_dssp HTTCH
T ss_pred HhCCH
Confidence 99986
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=8.7e-20 Score=148.20 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=88.2
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..+. +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++
T Consensus 49 ~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 49 AIALELLKQ-GASP---NVQDTSGTSPVHDAARTGFLDTLKVLVEH--GADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp HHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHC-CCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 568888888 3433 44788999999999999999999999998 78899999999999999999999999999998
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
. ++++.+|.+|.||||+|+..|+.
T Consensus 123 ~-----~~~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 123 E-----SDLHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp T-----SCTTCCCTTSCCHHHHHHHSCCH
T ss_pred c-----cCCCCcCCCCCCHHHHHHHcCcH
Confidence 6 36889999999999999999986
No 73
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.81 E-value=1.8e-20 Score=149.41 Aligned_cols=116 Identities=18% Similarity=0.128 Sum_probs=97.4
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
....+.||||+||..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+ +++|.+|.+|+||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG----ADVNAVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcCCCCCCCH
Confidence 344678999999999999999999998 7888999999999999999999999999999998 7899999999999
Q ss_pred HHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 159 LHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 159 LH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
||+|+..|+. .+...+++.. ......|.+|.||+++|.+...
T Consensus 84 L~~A~~~~~~-~~v~~Ll~~g--~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 84 LHLAAFIGHL-EIAEVLLKHG--ADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp HHHHHHHTCH-HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHcCCH-HHHHHHHHcC--CCCcCcCCCCCCHHHHHHHCCC
Confidence 9999999987 3333444332 2233448899999999987643
No 74
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=4.4e-21 Score=177.35 Aligned_cols=180 Identities=9% Similarity=0.005 Sum_probs=135.7
Q ss_pred CCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCC
Q 041572 8 HSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVL 83 (313)
Q Consensus 8 ~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g 83 (313)
-..|.+|.||||.|+..|.... ..++++.+..+...+....+..|.++. ++++.|++++ ... .+.+|
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~---v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~-----~~~~g 84 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDE---VRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG-EVH-----SLWHG 84 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHH---HHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHC-CCC-----CCBTT
T ss_pred cccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCc-----cccCC
Confidence 4568899999999999988766 233334444444444455666676664 8999999983 322 34579
Q ss_pred CcHHHHHHHhCcHHHHHHHHHhhC---CCCccc-----------------ccCCCChHHHHHHHcC--CHHHHHHHHcCC
Q 041572 84 KKPMFTAAKFGIYEIVMEIIISYF---PWSLSF-----------------SNEDGDDIFHAAVKHR--QENVFNIIFNMP 141 (313)
Q Consensus 84 ~tpLh~Aa~~G~~~~v~~Ll~~~~---~~~~~~-----------------~d~~G~t~Lh~A~~~g--~~~iv~~Ll~~~ 141 (313)
.||||+|+..|+.++++.|++. . +..++. +|..|+||||+|+..| +.+++++|++.+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEG-AKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHH-HHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHh-ccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 9999999999999999999985 2 344444 8889999999999999 999999999998
Q ss_pred cccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHH---hhhhhhcCCCCChhhhhhHhh
Q 041572 142 KAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRE---LQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 142 ~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~---l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+++|.+|.+|.||||+|+..|+. .+...+++...+ ......|..|.||+++|....
T Consensus 164 ----a~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 164 ----ASPTAKDKADETPLMRAMEFRNR-EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp ----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred ----CCCcccCCCCCCHHHHHHHcCCH-HHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 78999999999999999999987 344444443222 113334889999999998764
No 75
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=7.4e-20 Score=157.09 Aligned_cols=149 Identities=7% Similarity=-0.056 Sum_probs=118.4
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCC-CchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYY-PPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
+-..|.+|.||||.|+..+......... +.+. .....+....+..|.++. ++++.|+++ .... +.+|.
T Consensus 51 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~---~~~~~ 123 (223)
T 2f8y_A 51 ANIQDNMGRTPLHAAVSADAQGVFQILI---RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADV---NAVDD 123 (223)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH---HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCT---TCBCT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHH---HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCC---cCcCC
Confidence 3457889999999999998776532222 2111 111222233344455443 789999988 3433 34788
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHS 161 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~ 161 (313)
.|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+ ++++.+|..|.||||+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~ 197 (223)
T 2f8y_A 124 LGKSALHWAAAVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHF----ANRDITDHMDRLPRDI 197 (223)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTCCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC----CCCccccccCCCHHHH
Confidence 999999999999999999999998 8889999999999999999999999999999998 6889999999999999
Q ss_pred HHhcCCC
Q 041572 162 AARSVPS 168 (313)
Q Consensus 162 Aa~~~~~ 168 (313)
|++.++.
T Consensus 198 A~~~~~~ 204 (223)
T 2f8y_A 198 AQERMHH 204 (223)
T ss_dssp HHHTTCH
T ss_pred HHHhcch
Confidence 9999986
No 76
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.81 E-value=4.3e-20 Score=143.81 Aligned_cols=97 Identities=19% Similarity=0.233 Sum_probs=66.6
Q ss_pred HHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCC
Q 041572 62 LRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMP 141 (313)
Q Consensus 62 l~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 141 (313)
++.|+++ ..++ +.+|..|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 18 v~~Ll~~-~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 91 (126)
T 1n0r_A 18 VKLLLEA-GADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91 (126)
T ss_dssp HHHHHHH-TCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHc-CCCC---CCcCCCCCcHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC
Confidence 5666665 2222 23566677777777777777777777776 5666777777777777777777777777777766
Q ss_pred cccccccccccCCCCCHHHHHHhcCCC
Q 041572 142 KAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 142 ~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
++++.+|.+|+||||+|+..++.
T Consensus 92 ----~~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 92 ----ADVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp ----CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ----CCCcccCCCCCCHHHHHHHcCcH
Confidence 56677777777777777777654
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=8.2e-20 Score=167.05 Aligned_cols=135 Identities=14% Similarity=0.094 Sum_probs=95.7
Q ss_pred HHHHHHHhccccccc-------hhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC--
Q 041572 60 EILRIICVGAVDIAT-------AAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ-- 130 (313)
Q Consensus 60 ~il~~l~~~~~~~~~-------~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~-- 130 (313)
++++.++++ ..+++ .....+..|.||||+|++.|+.++++.||++ .+.+++.+|..|+|+||.++..++
T Consensus 139 ~~~~~ll~~-ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~-~gad~n~~d~~g~t~l~~~~~~~~~~ 216 (337)
T 4g8k_A 139 KALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE-MGADVNACDNMGRNALIHALLSSDDS 216 (337)
T ss_dssp HHHHHHHHT-TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHHSCTT
T ss_pred HHHHHHHHc-CCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc-cCCCcCccCCCCCcHHHHHHHHcCcc
Confidence 677777776 33332 1223566788889988888888888888876 678888888888888888776554
Q ss_pred --HHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 131 --ENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 131 --~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
.+++++|++.| +++|.+|.+|+||||+|++.|+.+.+ ..+++ .........|.+|.||+++|.+..
T Consensus 217 ~~~~i~~lLl~~g----ad~n~~d~~g~t~L~~a~~~~~~~~v-~~Ll~-~~~~~vn~~d~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 217 DVEAITHLLLDHG----ADVNVRGERGKTPLILAVEKKHLGLV-QRLLE-QEHIEINDTDSDGKTALLLAVELK 284 (337)
T ss_dssp THHHHHHHHHHTT----CCTTCCCGGGCCHHHHHHHTTCHHHH-HHHHT-STTCCTTCBCTTSCBHHHHHHHTT
T ss_pred cHHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHhhhhHHH-HHHHH-hcCCcccCcCCCCCCHHHHHHHcC
Confidence 35778888887 67888999999999999988876322 22221 112233344888999999988754
No 78
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=3.5e-20 Score=166.18 Aligned_cols=99 Identities=11% Similarity=0.005 Sum_probs=85.3
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..++ +.+|.+|.||||+||..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 54 ~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 127 (299)
T 1s70_B 54 EEVLRLLER-GADI---NYANVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAASCGYLDIAEYLIS 127 (299)
T ss_dssp HHHHHHHHH-CCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 558888887 3333 34778899999999999999999999998 78889999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
.+ ++++.+|.+|.||||+|+..++.
T Consensus 128 ~g----~~~~~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 128 QG----AHVGAVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp TT----CCTTCCCTTSCCHHHHCCSHHHH
T ss_pred CC----CCCCCcCCCCCCHHHHHHhcchH
Confidence 88 67888999999999999877665
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=1.1e-19 Score=149.20 Aligned_cols=119 Identities=8% Similarity=0.032 Sum_probs=102.4
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcH
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
....+.+|.||||.|+..+.. ++++.|+++ ..++ +.+|..|+||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~--------------------------------~~v~~Ll~~-g~~~---~~~~~~g~t~ 78 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRV--------------------------------SVVEYLLQH-GADV---HAKDKGGLVP 78 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCH--------------------------------HHHHHHHHT-TCCT---TCCCTTSCCH
T ss_pred ccccccCCCCHHHHHHHcChH--------------------------------HHHHHHHhc-CCCC---CccCCCCCCH
Confidence 345677788999998866543 348888888 3433 4478899999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcC
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSV 166 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~ 166 (313)
||+|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+ ++++.+|.+|+||||+|+. +
T Consensus 79 L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKH--GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG----ADPTKKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCTGGGSCT-T
T ss_pred HHHHHHcCcHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCCChhHhHhc-C
Confidence 9999999999999999998 8889999999999999999999999999999998 7899999999999999876 5
Q ss_pred CC
Q 041572 167 PS 168 (313)
Q Consensus 167 ~~ 168 (313)
+.
T Consensus 152 ~~ 153 (165)
T 3twr_A 152 DT 153 (165)
T ss_dssp CH
T ss_pred Ch
Confidence 54
No 80
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=8.1e-20 Score=135.96 Aligned_cols=81 Identities=22% Similarity=0.261 Sum_probs=76.2
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHS 161 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~ 161 (313)
+|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG----ADVNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHH
Confidence 489999999999999999999998 8889999999999999999999999999999998 7899999999999999
Q ss_pred HHhcCCC
Q 041572 162 AARSVPS 168 (313)
Q Consensus 162 Aa~~~~~ 168 (313)
|++.|+.
T Consensus 75 A~~~~~~ 81 (93)
T 1n0q_A 75 AARNGHL 81 (93)
T ss_dssp HHHTTCH
T ss_pred HHHcCCH
Confidence 9999986
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=2.6e-20 Score=173.48 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=56.4
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
+|.+|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+. ...+++.+|.+|.||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~d~~g~t~ 238 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK-LKGDIEELDRNGMTA 238 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHH-HHHTTSCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHC--CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCc-cccChhhcCCCCCCH
Confidence 566677777777777777777777766 56666666777777777777777777777766541 113566666677777
Q ss_pred HHHHHhcC
Q 041572 159 LHSAARSV 166 (313)
Q Consensus 159 LH~Aa~~~ 166 (313)
||+|+..+
T Consensus 239 L~~A~~~~ 246 (373)
T 2fo1_E 239 LMIVAHNE 246 (373)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhC
Confidence 77766665
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.80 E-value=3.7e-20 Score=156.28 Aligned_cols=116 Identities=10% Similarity=0.069 Sum_probs=94.2
Q ss_pred CCCCcHHHHHHHhCcH----HHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC------HHHHHHHHcCCccccccccc
Q 041572 81 NVLKKPMFTAAKFGIY----EIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ------ENVFNIIFNMPKAQTFFVAD 150 (313)
Q Consensus 81 ~~g~tpLh~Aa~~G~~----~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~------~~iv~~Ll~~~~~~~~~in~ 150 (313)
..|+||||+|+.+|+. +++++||+. +++++.+|..|+||||+|+..|+ .+++++|++.| +++|.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G----adin~ 109 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG----ADITA 109 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT----CCSSS
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC----CCCCc
Confidence 6799999999999975 599999998 89999999999999999999997 57899999999 89999
Q ss_pred ccCCCC-CHHHHHHhcCCCC----CcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 151 IDVKGV-NILHSAARSVPSS----EVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 151 ~d~~G~-TpLH~Aa~~~~~~----~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
+|.+|+ ||||+|+..+..+ .+...+++ +........|++|+||+++|.+...
T Consensus 110 ~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~-~~gad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS-QSGLQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT-STTCCTTCCCTTSCCHHHHHHTTTC
T ss_pred cCCCcCchHHHHHHHcCCChhhHHHHHHHHHH-hcCCCCcccCCCCCCHHHHHHHcCC
Confidence 999999 9999999965431 01122222 1233344459999999999988653
No 83
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.80 E-value=4e-20 Score=154.06 Aligned_cols=145 Identities=13% Similarity=0.016 Sum_probs=106.7
Q ss_pred CCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcCCCCcHH
Q 041572 12 ADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETENVLKKPM 87 (313)
Q Consensus 12 ~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~~g~tpL 87 (313)
.++.++|+.|++.|.......... .........+....+..|.++. ++++.|+++ ..+. +.+|..|+|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~---~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLD--NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARI---NVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHH--CTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCT---TCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHh--cCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCC---CCcCCCCCCHH
Confidence 456677777777666554222111 1111111222223334444433 779999988 3443 34788999999
Q ss_pred HHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCC
Q 041572 88 FTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVP 167 (313)
Q Consensus 88 h~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~ 167 (313)
|+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|.||||+|+..++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQY--KADINAVNEHGNVPLHYACFWGQDQVAEDLVANG----ALVSICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp HHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCSSBCCTTSCCGGGGSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCcchhccCCCCcHHHHHHHHH
Confidence 999999999999999998 8889999999999999999999999999999998 7899999999999999998776
Q ss_pred C
Q 041572 168 S 168 (313)
Q Consensus 168 ~ 168 (313)
.
T Consensus 151 ~ 151 (179)
T 3f6q_A 151 E 151 (179)
T ss_dssp H
T ss_pred H
Confidence 5
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.80 E-value=1.5e-19 Score=140.68 Aligned_cols=112 Identities=21% Similarity=0.233 Sum_probs=95.6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHS 161 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~ 161 (313)
+|+||||+|++.|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG----ADVNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC----CCCcccCCCCCcHHHH
Confidence 589999999999999999999999 7788999999999999999999999999999988 6889999999999999
Q ss_pred HHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 162 AARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 162 Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|+..++. .+...+++.. ......|.+|.||+++|.+..
T Consensus 75 A~~~~~~-~~~~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~ 112 (126)
T 1n0r_A 75 AARNGHL-EVVKLLLEAG--ADVNAKDKNGRTPLHLAARNG 112 (126)
T ss_dssp HHHTTCH-HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHcChH-HHHHHHHHcC--CCCcccCCCCCCHHHHHHHcC
Confidence 9999987 3333333322 223344889999999998754
No 85
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=7.9e-20 Score=160.63 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=103.1
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCC-------
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENV------- 82 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~------- 82 (313)
+|.+|.||||.|+..+.. ++++.|+++ ..+++. +|..
T Consensus 86 ~d~~g~t~L~~A~~~g~~--------------------------------~~v~~Ll~~-ga~~~~---~~~~~~~~~~~ 129 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSL--------------------------------QCVKLLVEN-GADVHL---RACGRFFQKHQ 129 (256)
T ss_dssp TTTTTCCHHHHHHHTTCH--------------------------------HHHHHHHHT-TCCTTC---CCCSGGGSCCS
T ss_pred ccccCCCHHHHHHHcCCH--------------------------------HHHHHHHHc-CCCCCc---ccccccccccc
Confidence 457799999999876643 337778877 343332 4443
Q ss_pred ------CCcHHHHHHHhCcHHHHHHHHH---hhCCCCcccccCCCChHHHHHHH--cCCHH-------HHHHHHcCCccc
Q 041572 83 ------LKKPMFTAAKFGIYEIVMEIII---SYFPWSLSFSNEDGDDIFHAAVK--HRQEN-------VFNIIFNMPKAQ 144 (313)
Q Consensus 83 ------g~tpLh~Aa~~G~~~~v~~Ll~---~~~~~~~~~~d~~G~t~Lh~A~~--~g~~~-------iv~~Ll~~~~~~ 144 (313)
|+||||+|+..|+.++++.|++ . +.+++.+|..|+||||+|+. +++.+ ++++|++.|
T Consensus 130 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~--ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g--- 204 (256)
T 2etb_A 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQ--PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG--- 204 (256)
T ss_dssp SSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH---
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhcccc--CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC---
Confidence 9999999999999999999999 7 88899999999999999999 88888 999999988
Q ss_pred cccc-------ccccCCCCCHHHHHHhcCCCCCcchHHhh
Q 041572 145 TFFV-------ADIDVKGVNILHSAARSVPSSEVSGAALQ 177 (313)
Q Consensus 145 ~~~i-------n~~d~~G~TpLH~Aa~~~~~~~i~~~~l~ 177 (313)
+++ +.+|.+|+||||+|++.|+. .+...+++
T Consensus 205 -a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~ 242 (256)
T 2etb_A 205 -ARLCPTVQLEEISNHQGLTPLKLAAKEGKI-EIFRHILQ 242 (256)
T ss_dssp -HHHSTTCCGGGCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred -CCcccccccccccCCCCCCHHHHHHHhCCH-HHHHHHHh
Confidence 567 89999999999999999987 34344444
No 86
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.79 E-value=3.7e-19 Score=159.01 Aligned_cols=125 Identities=13% Similarity=0.200 Sum_probs=106.0
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcH
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKP 86 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tp 86 (313)
+-..|.+|.||||+|+..... .....++++.|++.+ ......|..|+||
T Consensus 138 ~~~~~~~g~tpL~~a~~~~~~---------------------------~~~~~~~v~~Ll~~g----~~~~~~~~~g~tp 186 (276)
T 4hbd_A 138 VDKQNRAGYSPIMLTALATLK---------------------------TQDDIETVLQLFRLG----NINAKASQAGQTA 186 (276)
T ss_dssp TTCCCTTSCCHHHHGGGCCCC---------------------------SHHHHHHHHHHHHHS----CTTCCCTTTCCCH
T ss_pred CCCCCCCCCCHHHHHHHHHhh---------------------------hhhhHHHHHHHHHcC----CCccccCCCCCCH
Confidence 456789999999998743211 123356788888883 2233467889999
Q ss_pred HHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc-CCcccccccccccCCCCCHHHHHHhc
Q 041572 87 MFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN-MPKAQTFFVADIDVKGVNILHSAARS 165 (313)
Q Consensus 87 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~-~~~~~~~~in~~d~~G~TpLH~Aa~~ 165 (313)
||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++ .+ +++|.+|.+|+||||+|+..
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~--gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g----ad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLAC--EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS----CDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT----CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC----CCCcCcCCCCCCHHHHHHHc
Confidence 9999999999999999998 88899999999999999999999999999999 66 78999999999999999999
Q ss_pred CCC
Q 041572 166 VPS 168 (313)
Q Consensus 166 ~~~ 168 (313)
|+.
T Consensus 261 g~~ 263 (276)
T 4hbd_A 261 GQS 263 (276)
T ss_dssp TCH
T ss_pred CCH
Confidence 987
No 87
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.79 E-value=9.1e-20 Score=160.46 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=104.4
Q ss_pred CCCCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhc------
Q 041572 7 LHSENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETE------ 80 (313)
Q Consensus 7 ~~~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d------ 80 (313)
+..+|.+|.||||+|+..|.. ++++.|+++ ..+++. +|
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~--------------------------------~~v~~Ll~~-ga~~~~---~~~~~~~~ 129 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCK--------------------------------HYVELLVEK-GADVHA---QARGRFFQ 129 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCH--------------------------------HHHHHHHHT-TCCTTC---CCEECCCS
T ss_pred ccccccCCCCHHHHHHHcCCH--------------------------------HHHHHHHhC-CCCcCc---cccccccC
Confidence 344566899999999876544 347788887 343332 33
Q ss_pred --------CCCCcHHHHHHHhCcHHHHHHHHH---hhCCCCcccccCCCChHHHHHHHcCC---------HHHHHHHHcC
Q 041572 81 --------NVLKKPMFTAAKFGIYEIVMEIII---SYFPWSLSFSNEDGDDIFHAAVKHRQ---------ENVFNIIFNM 140 (313)
Q Consensus 81 --------~~g~tpLh~Aa~~G~~~~v~~Ll~---~~~~~~~~~~d~~G~t~Lh~A~~~g~---------~~iv~~Ll~~ 140 (313)
..|+||||+|+..|+.++++.|++ . +.+++.+|..|+||||+|+..++ .+++++|++.
T Consensus 130 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~--ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 207 (260)
T 3jxi_A 130 PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK--QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK 207 (260)
T ss_dssp SSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc--CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh
Confidence 579999999999999999999999 7 88899999999999999999888 7999999998
Q ss_pred Cccccccc-------ccccCCCCCHHHHHHhcCCCCCcchHHhh
Q 041572 141 PKAQTFFV-------ADIDVKGVNILHSAARSVPSSEVSGAALQ 177 (313)
Q Consensus 141 ~~~~~~~i-------n~~d~~G~TpLH~Aa~~~~~~~i~~~~l~ 177 (313)
| +++ +.+|.+|+||||+|++.|+. .+...+++
T Consensus 208 g----a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~ 246 (260)
T 3jxi_A 208 C----AKLFPDTNLEALLNNDGLSPLMMAAKTGKI-GIFQHIIR 246 (260)
T ss_dssp H----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred C----cccccccchhhcccCCCCCHHHHHHHcCCH-HHHHHHHH
Confidence 8 555 78999999999999999987 34444444
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=7.3e-20 Score=157.70 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=99.2
Q ss_pred hhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcC-CcccccccccccCCCC
Q 041572 78 ETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNM-PKAQTFFVADIDVKGV 156 (313)
Q Consensus 78 ~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~in~~d~~G~ 156 (313)
.++.+|.||||+||..|+.++++.|++. +..++.+|..|+||||+||.+|+.+++++|++. + +++|.+|.+|+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g----~~~~~~d~~g~ 141 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPN----IELNQQNKLGD 141 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT----CCCCCCCTTSC
T ss_pred ccccccccccccccccCcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC----CCccccCCCCC
Confidence 3677899999999999999999999998 788999999999999999999999999999998 6 78999999999
Q ss_pred CHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 157 NILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 157 TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
||||+|+..|+. .+...+++.. ......|.+|.||+++|....
T Consensus 142 tpL~~A~~~~~~-~~v~~Ll~~g--a~~~~~~~~g~t~l~~A~~~~ 184 (222)
T 3ehr_A 142 TALHAAAWKGYA-DIVQLLLAKG--ARTDLRNIEKKLAFDMATNAA 184 (222)
T ss_dssp CHHHHHHHHTCH-HHHHHHHHHT--CCSCCCCTTSCCHHHHCCSHH
T ss_pred CHHHHHHHcCCH-HHHHHHHHcC--CCCccccCCCCCHHHHhcchh
Confidence 999999999987 3444444432 223344899999999998643
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.78 E-value=4.6e-20 Score=155.73 Aligned_cols=100 Identities=12% Similarity=0.025 Sum_probs=88.2
Q ss_pred HHHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCc------HHHHHHHHHhhCCCCcccccCCCC-hHHHHHHHcCC-
Q 041572 59 LEILRIICVGAVDIATAAKETENVLKKPMFTAAKFGI------YEIVMEIIISYFPWSLSFSNEDGD-DIFHAAVKHRQ- 130 (313)
Q Consensus 59 ~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~------~~~v~~Ll~~~~~~~~~~~d~~G~-t~Lh~A~~~g~- 130 (313)
.++++.|+++ ..++ +.+|.+|+||||+|+..|+ .++++.|++. +++++.+|..|+ ||||+|+..+.
T Consensus 55 ~~iv~~Ll~~-Gadv---n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~--Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 55 YKISMFLINK-GADI---KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK--GADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp HHHHHHHHHT-TCCS---SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT--TCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred HHHHHHHHHC-CCCC---CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC--CCCCCccCCCcCchHHHHHHHcCCC
Confidence 4679999998 4444 4478999999999999997 6889999998 899999999999 99999999554
Q ss_pred ----HHHHHHHHc-CCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 131 ----ENVFNIIFN-MPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 131 ----~~iv~~Ll~-~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
.+++++|++ .| +++|.+|.+|.||||+|++.|+.
T Consensus 129 ~~~~~~iv~~Ll~~~g----ad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 129 ENEMIPLYKLIFSQSG----LQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp HHHHHHHHHHHHTSTT----CCTTCCCTTSCCHHHHHHTTTCH
T ss_pred hhhHHHHHHHHHHhcC----CCCcccCCCCCCHHHHHHHcCCH
Confidence 569999999 88 79999999999999999999986
No 90
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=1.5e-19 Score=160.54 Aligned_cols=148 Identities=17% Similarity=0.114 Sum_probs=112.4
Q ss_pred CCCCCCCccccccccC---CCcchhhhhhhc----------cCCCCCchhHhhhhhccccHHHH----HHHHHHHhcccc
Q 041572 9 SENADGDLEKQLSETS---PFAFGLYISYFY----------LNPYYPPSIKSIRNTKLTHKQTL----EILRIICVGAVD 71 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~---~~~~~~~~~~~~----------l~~~~~~~~~~~~~~k~~~~~~~----~il~~l~~~~~~ 71 (313)
.+|.+|.||||+|+.+ +........... ++.... .++....+..|.++. ++++.|+++ ..
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~--~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga 125 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYT--DSYYKGQTALHIAIERRNMTLVTLLVEN-GA 125 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCC--STTTTTCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccc--cccCCCCCHHHHHHHcCCHHHHHHHHHC-CC
Confidence 4688999999999975 655442211111 111000 012234455566554 899999998 44
Q ss_pred ccchhhhhcC--------------CCCcHHHHHHHhCcHHHHHHHHH---hhCCCCcccccCCCChHHHHHHHcCC----
Q 041572 72 IATAAKETEN--------------VLKKPMFTAAKFGIYEIVMEIII---SYFPWSLSFSNEDGDDIFHAAVKHRQ---- 130 (313)
Q Consensus 72 ~~~~~~~~d~--------------~g~tpLh~Aa~~G~~~~v~~Ll~---~~~~~~~~~~d~~G~t~Lh~A~~~g~---- 130 (313)
+++. ++. .|.||||+|+..|+.++++.|++ . +.+++.+|..|+||||+|+..|+
T Consensus 126 ~~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~--gad~~~~d~~g~tpLh~A~~~~~~~~~ 200 (273)
T 2pnn_A 126 DVQA---AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ--PADISARDSVGNTVLHALVEVADNTVD 200 (273)
T ss_dssp CTTC---CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC--CCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred CcCc---cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC--CCCceeeCCCCCcHHHHHHHccCcchh
Confidence 4433 444 79999999999999999999999 7 88899999999999999999998
Q ss_pred -----HHHHHHHHcCCcccccccc-------cccCCCCCHHHHHHhcCCC
Q 041572 131 -----ENVFNIIFNMPKAQTFFVA-------DIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 131 -----~~iv~~Ll~~~~~~~~~in-------~~d~~G~TpLH~Aa~~~~~ 168 (313)
.+++++|++.+ +++| .+|.+|+||||+|++.|+.
T Consensus 201 ~~~~~~~~v~~Ll~~g----a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 201 NTKFVTSMYNEILILG----AKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHHHHHHHHHHHHHH----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhh----hhcccccccccccCCCCCCHHHHHHHhChH
Confidence 79999999988 5565 5999999999999999987
No 91
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.78 E-value=1.2e-19 Score=157.97 Aligned_cols=126 Identities=20% Similarity=0.135 Sum_probs=97.5
Q ss_pred HHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCc
Q 041572 63 RIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPK 142 (313)
Q Consensus 63 ~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 142 (313)
+.|+++ ....+.....+.+|.||||+||..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 2 ~~ll~~-~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g- 77 (229)
T 2vge_A 2 RSVLRK-AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAG- 77 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred eehhcc-CCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-
Confidence 344555 233333333567788999999999999999999998 7789999999999999999999999999999998
Q ss_pred ccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhh-cCCCCChhhhh
Q 041572 143 AQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKL-NDKDKTPRELF 198 (313)
Q Consensus 143 ~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~-n~~G~Tp~dla 198 (313)
+++|.+|.+|+||||+|+..|+. .+...+++...+ .... |.+|.||+++|
T Consensus 78 ---a~~n~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~ga~--~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 78 ---ANVNSPDSHGWTPLHCAASCNDT-VICMALVQHGAA--IFATTLSDGATAFEKC 128 (229)
T ss_dssp ---CCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHTTTCC--TTCCCSSTTCCTGGGC
T ss_pred ---CCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC--cccccCCCCCCHHHHH
Confidence 78999999999999999999987 343444443222 2223 46999999998
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=1.8e-19 Score=150.96 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=96.6
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCccccccccccc-CCCCC
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADID-VKGVN 157 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d-~~G~T 157 (313)
.+.+|.||||+|++.|+.++++.|++ +.+++.+|..|+||||+|+.+|+.+++++|++.+ +++|.+| .+|+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~~g~t 112 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG----ADLDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCSSSSCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcCCCCCCCC
Confidence 45678999999999999999999997 4567889999999999999999999999999998 7889898 89999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|||+|+..|+. .+...+++.. ......|.+|.||+++|.+..+
T Consensus 113 pL~~A~~~~~~-~~v~~Ll~~g--a~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 113 ALHMAAGYVRP-EVVEALVELG--ADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHHH
T ss_pred HHHHHHhcCcH-HHHHHHHHcC--CCCcCCCCCCCCHHHHHHHhcc
Confidence 99999999987 3434444432 3334459999999999987543
No 93
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=2.1e-19 Score=138.73 Aligned_cols=109 Identities=16% Similarity=0.087 Sum_probs=91.4
Q ss_pred hhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC
Q 041572 78 ETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN 157 (313)
Q Consensus 78 ~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 157 (313)
.+|.+|+||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG----ADVNARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT----CCTTCCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC----CCCcccCCCCCC
Confidence 3688999999999999999999999998 7788999999999999999999999999999998 789999999999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPR 195 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~ 195 (313)
|||+|+..++. .+...+++...+ ....+..|.||.
T Consensus 78 pl~~A~~~~~~-~~~~~Ll~~ga~--~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHH-EIVKLLDAKGAD--VNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCH-HHHHHHHTTSSS--HHHHSCCCC---
T ss_pred HHHHHHHCCCH-HHHHHHHHcCCC--CCcCCccccccc
Confidence 99999999987 344444443333 344488888874
No 94
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.78 E-value=1.2e-19 Score=147.89 Aligned_cols=114 Identities=15% Similarity=0.002 Sum_probs=96.3
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCC-
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVN- 157 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T- 157 (313)
.+..|.||||+|++.|+.++++.|++. +..++.+|..|+||||+|+ .|+.+++++|++.+ +++|.+|..|+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g----~~~~~~d~~g~tt 80 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG----AEPNCADPATLTR 80 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT----CCCCCCCTTTCCC
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC----CCCCCcCCCCCcH
Confidence 567899999999999999999999998 7889999999999999995 99999999999998 789999999999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|||+|++.|+. .+...+++. .......|..|.||+++|....
T Consensus 81 pL~~A~~~~~~-~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~ 122 (156)
T 1bi7_B 81 PVHDAAREGFL-DTLVVLHRA--GARLDVRDAWGRLPVDLAEELG 122 (156)
T ss_dssp HHHHHHHHTCH-HHHHHHHHH--TCCSSCCCTTCCCHHHHHHHHT
T ss_pred HHHHHHHCCCH-HHHHHHHHc--CCCCcccCCCCCCHHHHHHHhC
Confidence 99999999987 333344433 2233344889999999998764
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=1.2e-19 Score=156.43 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=90.5
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|++. ..++ +.+|..|+||||+||..|+.++++.|++. .+..++.+|..|+||||+|+..|+.+++++|++
T Consensus 87 ~~v~~Ll~~-g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 161 (222)
T 3ehr_A 87 SWLRECLDN-RVGV---NGLDKAGSTALYWACHGGHKDIVEMLFTQ-PNIELNQQNKLGDTALHAAAWKGYADIVQLLLA 161 (222)
T ss_dssp HHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHTTS-TTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhC-CCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHcC-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 678899888 3433 34788999999999999999999999997 788999999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
.| ++++.+|.+|.||||+|+..++.
T Consensus 162 ~g----a~~~~~~~~g~t~l~~A~~~~~~ 186 (222)
T 3ehr_A 162 KG----ARTDLRNIEKKLAFDMATNAACA 186 (222)
T ss_dssp HT----CCSCCCCTTSCCHHHHCCSHHHH
T ss_pred cC----CCCccccCCCCCHHHHhcchhHH
Confidence 98 78999999999999999987765
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=6.7e-19 Score=159.62 Aligned_cols=127 Identities=15% Similarity=0.055 Sum_probs=97.9
Q ss_pred HHHHHHHhccccccchh---hhhcCCCCcHHHHHHHh---CcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHH
Q 041572 60 EILRIICVGAVDIATAA---KETENVLKKPMFTAAKF---GIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENV 133 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~---~~~d~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~i 133 (313)
+.++.+++. ..+++.. ..+|..|+||||+|+.. |+.+++++|++. +.+++.+|..|+||||+|+..|+.++
T Consensus 165 ~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~ 241 (301)
T 2b0o_E 165 LSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNTALHYAALYNQPDC 241 (301)
T ss_dssp HHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH--SSCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 456667776 3333221 01578899999999997 999999999999 88899999999999999999999999
Q ss_pred HHHHHcCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 134 FNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 134 v~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+++|++.| ++++.+|.+|+||||+|+..|+. .+...+++.. ...|.||+++|.+..
T Consensus 242 v~~Ll~~g----ad~~~~d~~G~TpL~~A~~~~~~-~iv~~Ll~~g--------a~~g~tpLh~A~~~g 297 (301)
T 2b0o_E 242 LKLLLKGR----ALVGTVNEAGETALDIARKKHHK-ECEELLEQAQ--------AGTFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTT----CCCSCCCTTSCCHHHHHHHHTCH-HHHHHHHHHH--------HHTTSSCCC------
T ss_pred HHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHhc--------CCCCCChhHHHHhcC
Confidence 99999998 78999999999999999999987 3333332221 236899999998653
No 97
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.76 E-value=3.1e-19 Score=155.89 Aligned_cols=125 Identities=17% Similarity=0.150 Sum_probs=91.6
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
+.++.|++++ ...+ .+..|.||||.|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++
T Consensus 19 ~~~~~ll~~g-~~~~----~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 91 (239)
T 1ycs_B 19 KTGSERIAHG-MRVK----FNPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ 91 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHhccC-CCcc----cCchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5677888873 3332 235789999999999999999999998 77899999999999999999999999999999
Q ss_pred CCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCC-Chhhhh
Q 041572 140 MPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDK-TPRELF 198 (313)
Q Consensus 140 ~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~-Tp~dla 198 (313)
.+ +++|.+|.+|+||||+|+..|+. .+...+++...+ ....|..|. ||+++|
T Consensus 92 ~g----a~~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~--~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 92 FG----VNVNAADSDGWTPLHCAASCNNV-QVCKFLVESGAA--VFAMTYSDMQTAADKC 144 (239)
T ss_dssp HT----CCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCC--TTCCCSSSCCCHHHHC
T ss_pred cC----CCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC--cceecCCCCcchHHHH
Confidence 88 78999999999999999999987 344444443322 233365665 999998
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.76 E-value=1.8e-18 Score=155.11 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=40.6
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCC-CCHHHH
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKG-VNILHS 161 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G-~TpLH~ 161 (313)
|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|..| .||||+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~g~~t~L~~ 135 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN----WRLMFYGKTGWKTSFYH 135 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC----GGGGGCSSSGGGSHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC----CCCCccCCCCCCCHHHH
Confidence 45555555555555555555544 4444445555555555555555555555555544 3444555555 455555
Q ss_pred HHhcCCC
Q 041572 162 AARSVPS 168 (313)
Q Consensus 162 Aa~~~~~ 168 (313)
|+..|+.
T Consensus 136 A~~~~~~ 142 (285)
T 3kea_A 136 AVMLNDV 142 (285)
T ss_dssp HHHTTCH
T ss_pred HHHcCCH
Confidence 5555443
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=7.9e-19 Score=163.44 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=92.5
Q ss_pred HHHHHHHhccccccchhhhhc--CCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHH
Q 041572 60 EILRIICVGAVDIATAAKETE--NVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNII 137 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d--~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~L 137 (313)
++++.|+++ ..+++. ++ ..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.+++++|
T Consensus 214 ~~v~~LL~~-Gadvn~---~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~--Gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 287 (368)
T 3jue_A 214 PTMADALAH-GADVNW---VNGGQDNATPLIQATAANSLLACEFLLQN--GANVNQADSAGRGPLHHATILGHTGLACLF 287 (368)
T ss_dssp HHHHHHHHT-TCCTTC---CCTTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHc-CCCCCc---cccccCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 568888888 344433 44 7899999999999999999999998 888999999999999999999999999999
Q ss_pred HcCCcccccccccccCCCCCHHHHHHhcCCCCCcchHHhhhh-HHhhhhhhcCCCCChhhhhhHh
Q 041572 138 FNMPKAQTFFVADIDVKGVNILHSAARSVPSSEVSGAALQMQ-RELQWFKLNDKDKTPRELFTEE 201 (313)
Q Consensus 138 l~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~~~i~~~~l~~~-~~l~~~~~n~~G~Tp~dla~~~ 201 (313)
++.+ ++++.+|.+|+||||+|+..++. .+...+++.. .+......+..+.|+++++.+.
T Consensus 288 L~~G----ad~~~~d~~G~TpL~~A~~~g~~-~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 288 LKRG----ADLGARDSEGRDPLTIAMETANA-DIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHTT----CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHHC----------------------
T ss_pred HHCc----CCCCCcCCCCCCHHHHHHHCCCH-HHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9998 78999999999999999999987 3333333221 1111112266789999988764
No 100
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.75 E-value=8.9e-19 Score=160.29 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=83.4
Q ss_pred HHHHHHHhccccccchhhh-hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCC---HHHHH
Q 041572 60 EILRIICVGAVDIATAAKE-TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQ---ENVFN 135 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~-~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~iv~ 135 (313)
++++.|.+. ..+ .+. +|.+|+||||+||..|+.++|+.||+. +.+++.+|..|+||||+|+.+|+ .++++
T Consensus 111 ~~~~~l~~~-g~d---vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 111 EVNDAFPNT-QLN---LNIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHCTTS-CCC---SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHH
T ss_pred HHHHHHHhc-CCC---cccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhcccccHHHHH
Confidence 455555555 222 234 688999999999999999999999999 88999999999999999999999 67888
Q ss_pred HHHcCCcccccccccccCCCCCHHHHHHh----cCCC
Q 041572 136 IIFNMPKAQTFFVADIDVKGVNILHSAAR----SVPS 168 (313)
Q Consensus 136 ~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~----~~~~ 168 (313)
.|++.+. ++++.+|.+|+||||+|++ .|+.
T Consensus 185 ~ll~~~~---~~~~~~d~~g~tpLh~A~~~~~~~g~~ 218 (327)
T 1sw6_A 185 ALLDYLY---PCLILEDSMNRTILHHIIITSGMTGCS 218 (327)
T ss_dssp HHHHHHG---GGGGEECTTCCCHHHHHHHHHTSTTCH
T ss_pred HHHHhhh---ccccCCCCCCCCHHHHHHHHccccccH
Confidence 8887652 4689999999999999998 5655
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.74 E-value=1.1e-18 Score=159.43 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=109.3
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccC-CCCCchhHhhhhhccccHH--------HHHHHHHHHhccccccchhhhh
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLN-PYYPPSIKSIRNTKLTHKQ--------TLEILRIICVGAVDIATAAKET 79 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~k~~~~~--------~~~il~~l~~~~~~~~~~~~~~ 79 (313)
..+.+|.||||.|++.|.....-. +++ .+..+..++....+..+.. ..++++.|++++ .++ +.+
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~---LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~---n~~ 235 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKI---LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADV---NVR 235 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHH---HHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCT---TCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHH---HHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCC---CCc
Confidence 346789999999999887765222 221 1222111111222222221 235788888883 433 447
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHH
Q 041572 80 ENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNIL 159 (313)
Q Consensus 80 d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 159 (313)
|.+|+||||+|+..|+.++++.|++. .+.+++.+|.+|+||||+|+.+|+.++|++|++.| +++|. .|||
T Consensus 236 d~~g~t~L~~a~~~~~~~~v~~Ll~~-~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G----Ad~n~-----~~~L 305 (337)
T 4g8k_A 236 GERGKTPLILAVEKKHLGLVQRLLEQ-EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG----ASTDC-----GDLV 305 (337)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHTS-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS----CSSTT-----CCHH
T ss_pred CCCCCCHHHHHHHhhhhHHHHHHHHh-cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCC-----CCHH
Confidence 88999999999999999999999987 68889999999999999999999999999999998 55554 4699
Q ss_pred HHHHhcCCCCCcchHHhhh
Q 041572 160 HSAARSVPSSEVSGAALQM 178 (313)
Q Consensus 160 H~Aa~~~~~~~i~~~~l~~ 178 (313)
|+|++.|+. .+...+++.
T Consensus 306 ~~A~~~~~~-~iv~~Ll~~ 323 (337)
T 4g8k_A 306 MTARRNYDH-SLVKVLLSH 323 (337)
T ss_dssp HHHHHTTCH-HHHHHHHHT
T ss_pred HHHHHcCCH-HHHHHHHHC
Confidence 999999987 344444443
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=1.3e-18 Score=152.76 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=96.0
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCccccccccccc-CCCCC
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADID-VKGVN 157 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d-~~G~T 157 (313)
.+.+|.||||+||+.|+.++++.|++ +.+++.+|..|+||||+|+.+|+.+++++|++.+ +++|.+| ..|+|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~g~t 113 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG----ADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT----CCTTCCCSSSCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC----CCCCcCCCCCCCC
Confidence 34568899999999999999999997 4568889999999999999999999999999998 7889998 88999
Q ss_pred HHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 158 ILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 158 pLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|||+|+..|+. .+...+++.. ......|.+|.||+++|.+..
T Consensus 114 ~L~~A~~~g~~-~~v~~Ll~~g--a~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 114 ALHMAAGYVRP-EVVEALVELG--ADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHCC--CCCCCCCCCCCcHHHHHHHHH
Confidence 99999999987 3444444433 233445899999999998753
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=7.4e-18 Score=129.46 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=78.4
Q ss_pred hcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 79 TENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
.|.+|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tp 93 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG----ADVXAQDKFGKTA 93 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccccCCCcH
Confidence 677899999999999999999999998 7889999999999999999999999999999998 7899999999999
Q ss_pred HHHHHhcCCC
Q 041572 159 LHSAARSVPS 168 (313)
Q Consensus 159 LH~Aa~~~~~ 168 (313)
||+|+..|+.
T Consensus 94 l~~A~~~~~~ 103 (110)
T 2zgd_A 94 FDISIDNGNE 103 (110)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCCH
Confidence 9999999875
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.72 E-value=7.2e-18 Score=151.08 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=80.4
Q ss_pred hcCCCCcHHHHHHHh---CcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCC
Q 041572 79 TENVLKKPMFTAAKF---GIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKG 155 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 155 (313)
.|..|+||||+||.. |+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|++.| +++|.+|.+|
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~--ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g----ad~~~~d~~g 238 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK----ASIEIANESG 238 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTS
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCccCCC
Confidence 578899999999999 999999999999 8889999999999999999999999999999998 7899999999
Q ss_pred CCHHHHHHhcCCC
Q 041572 156 VNILHSAARSVPS 168 (313)
Q Consensus 156 ~TpLH~Aa~~~~~ 168 (313)
.||||+|+..|+.
T Consensus 239 ~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 239 ETPLDIAKRLKHE 251 (278)
T ss_dssp CCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCH
Confidence 9999999999986
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=5e-18 Score=130.91 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=92.9
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHH
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMF 88 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh 88 (313)
.+|.+|.|+||.|+..+.. ++++.|+++ ..++ +.+|..|+||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~--------------------------------~~~~~Ll~~-g~~~---~~~d~~g~t~L~ 47 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHA--------------------------------EEVKKLLSK-GADV---NARSKDGNTPLH 47 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCH--------------------------------HHHHHHTTT-TCCS---SCCCSSSCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCH--------------------------------HHHHHHHHc-CCCC---CCcCCCCCCHHH
Confidence 5789999999999866543 337788877 3433 337889999999
Q ss_pred HHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 89 TAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 89 ~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.| +++|.++..|.||
T Consensus 48 ~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g----a~~n~~~~~~~~~ 111 (115)
T 2l6b_A 48 LAAKNGHAEIVKLLLAK--GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKG----ADVNARSWGSSHH 111 (115)
T ss_dssp HHHTTTCHHHHHHHTTT--TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTS----SSHHHHSCCCC--
T ss_pred HHHHcCcHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcC----CCCCcCCcccccc
Confidence 99999999999999998 7889999999999999999999999999999998 7899999999998
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.69 E-value=1.2e-17 Score=151.39 Aligned_cols=114 Identities=14% Similarity=0.047 Sum_probs=89.5
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHHH
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMFT 89 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~ 89 (313)
.+.+|.||||+|+..+.. ...++++.|+++ ..++ +.+|.+|+||||+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~-----------------------------~~~~iv~~Ll~~-gadv---n~~d~~G~TpLh~ 232 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQ-----------------------------ASLPLVDFIIQN-GGHL---DAKAADGNTALHY 232 (301)
T ss_dssp SCSCEECHHHHHHHTCCT-----------------------------TTHHHHHHHHHH-SSCT---TCCCTTCCCHHHH
T ss_pred cCCCCccHHHHHHHhccc-----------------------------CcHHHHHHHHhc-CCCC---CCCCCCCCCHHHH
Confidence 578899999999865321 013568899988 3444 4478899999999
Q ss_pred HHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 90 AAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 90 Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
|+..|+.++++.|++. +++++.+|..|+||||+|+..|+.+++++|++.+ ++ .|+||||+|+..|+.
T Consensus 233 A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g----a~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKG--RALVGTVNEAGETALDIARKKHHKECEELLEQAQ----AG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHTTCHHHHHHHHHT--TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH----HH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc----CC------CCCChhHHHHhcCCc
Confidence 9999999999999998 8889999999999999999999999999999976 22 689999999999874
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.69 E-value=4.2e-17 Score=121.10 Aligned_cols=76 Identities=14% Similarity=0.274 Sum_probs=68.0
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHc
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNIIFN 139 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 139 (313)
++++.|+++ ..++ +.+|..|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 16 ~~v~~Ll~~-g~~~---n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~ 89 (93)
T 1n0q_A 16 EVVKLLLEA-GADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89 (93)
T ss_dssp HHHHHHHHT-TCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 348888888 3443 44788999999999999999999999998 88899999999999999999999999999999
Q ss_pred CC
Q 041572 140 MP 141 (313)
Q Consensus 140 ~~ 141 (313)
.|
T Consensus 90 ~g 91 (93)
T 1n0q_A 90 AG 91 (93)
T ss_dssp TT
T ss_pred cC
Confidence 87
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.68 E-value=4.9e-17 Score=157.10 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=90.4
Q ss_pred HHHHHHHhccccccchh---hhhcCCCCcHHHHHHH---hCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHH
Q 041572 60 EILRIICVGAVDIATAA---KETENVLKKPMFTAAK---FGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENV 133 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~---~~~d~~g~tpLh~Aa~---~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~i 133 (313)
+.++.|+++ ..+++.. ...|..|+||||+||+ .|+.++++.|++. +++++.+|..|+||||+|+.+|+.++
T Consensus 146 ~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~--ga~vn~~d~~g~TpLh~A~~~g~~~~ 222 (497)
T 3lvq_E 146 LSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNTALHYAALYNQPDC 222 (497)
T ss_dssp HHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH--SCCTTCCCSSSCCHHHHHTTTTCHHH
T ss_pred HHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHH
Confidence 678888888 3444321 1137789999999966 9999999999999 88999999999999999999999999
Q ss_pred HHHHHcCCcccccccccccCCCCCHHHHHHhcCCC
Q 041572 134 FNIIFNMPKAQTFFVADIDVKGVNILHSAARSVPS 168 (313)
Q Consensus 134 v~~Ll~~~~~~~~~in~~d~~G~TpLH~Aa~~~~~ 168 (313)
+++|++.| +++|.+|.+|+||||+|+..|+.
T Consensus 223 v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 223 LKLLLKGR----ALVGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp HHHHHHTC----CCCSCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCH
Confidence 99999998 78999999999999999999987
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.64 E-value=1.3e-16 Score=148.35 Aligned_cols=115 Identities=12% Similarity=0.064 Sum_probs=96.9
Q ss_pred hcCCCCcHHHHHHHh-CcHHHHHHHHHhhCCCCccccc--CCCChHHHHHHHcCCHHHHHHHHcCCcccccccccccCCC
Q 041572 79 TENVLKKPMFTAAKF-GIYEIVMEIIISYFPWSLSFSN--EDGDDIFHAAVKHRQENVFNIIFNMPKAQTFFVADIDVKG 155 (313)
Q Consensus 79 ~d~~g~tpLh~Aa~~-G~~~~v~~Ll~~~~~~~~~~~d--~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 155 (313)
.+..+.|+||.|+.. |+.++++.|++. +.+++..| ..|+||||+|+..|+.+++++|++.+ +++|.+|.+|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G----advn~~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG----ANVNQADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC----CCCCCCCCCC
Confidence 444567899999999 999999999998 78888888 89999999999999999999999998 7899999999
Q ss_pred CCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 156 VNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 156 ~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
+||||+|+..|+. .+...+++... .....|.+|.||+++|.+..
T Consensus 269 ~TpLh~A~~~g~~-~~v~~LL~~Ga--d~~~~d~~G~TpL~~A~~~g 312 (368)
T 3jue_A 269 RGPLHHATILGHT-GLACLFLKRGA--DLGARDSEGRDPLTIAMETA 312 (368)
T ss_dssp CCHHHHHHHHTCH-HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCcH-HHHHHHHHCcC--CCCCcCCCCCCHHHHHHHCC
Confidence 9999999999987 34444444332 33444899999999998754
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.64 E-value=3.8e-18 Score=159.29 Aligned_cols=101 Identities=15% Similarity=0.096 Sum_probs=60.2
Q ss_pred HHHHHHHhccccccchhhhhcCCCCcHHHHHHHhCcHHHHHHHHHhhCCCC---cccccCCCChHHHHHHHcCCHHHHHH
Q 041572 60 EILRIICVGAVDIATAAKETENVLKKPMFTAAKFGIYEIVMEIIISYFPWS---LSFSNEDGDDIFHAAVKHRQENVFNI 136 (313)
Q Consensus 60 ~il~~l~~~~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~---~~~~d~~G~t~Lh~A~~~g~~~iv~~ 136 (313)
++++.|++++ ......+..+..|.||||+||+.|+.++|++|++. +.+ .+..+.+ +||||+|+.+|+.+++++
T Consensus 106 e~v~~Ll~~g-a~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~--gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~ 181 (376)
T 2aja_A 106 SALDTLCLLL-TSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAEN-YHAFRLAAENGHLHVLNR 181 (376)
T ss_dssp HHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcC-CcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC-CCHHHHHHHCCCHHHHHH
Confidence 5666766662 21101111333456677777777777777777776 322 1222222 777777777777777777
Q ss_pred HHcCCccccccccc--ccCCCCCHHHHHH-hcCCC
Q 041572 137 IFNMPKAQTFFVAD--IDVKGVNILHSAA-RSVPS 168 (313)
Q Consensus 137 Ll~~~~~~~~~in~--~d~~G~TpLH~Aa-~~~~~ 168 (313)
|++.+ ++++. +|.+|.||||+|+ ..|+.
T Consensus 182 Ll~~g----a~~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 182 LCELA----PTEATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp HHHSC----GGGHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred HHHcC----CccchhccCCCCCCHHHHHHHHCCCH
Confidence 77776 45555 6677777777777 77765
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.61 E-value=2.5e-16 Score=152.15 Aligned_cols=110 Identities=16% Similarity=0.118 Sum_probs=93.4
Q ss_pred CcHHHHHHHhCcHHHHHHHHHhhCCCCcccc------cCCCChHHHHHHH---cCCHHHHHHHHcCCcccccccccccCC
Q 041572 84 KKPMFTAAKFGIYEIVMEIIISYFPWSLSFS------NEDGDDIFHAAVK---HRQENVFNIIFNMPKAQTFFVADIDVK 154 (313)
Q Consensus 84 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~------d~~G~t~Lh~A~~---~g~~~iv~~Ll~~~~~~~~~in~~d~~ 154 (313)
.+.||.|+..|+.+.++.|++. +.+++.. |..|+||||+||. .|+.+++++|++.| +++|.+|.+
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g----a~vn~~d~~ 206 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG----GHLDAKAAD 206 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS----CCTTCCCSS
T ss_pred HHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC----CCCCccCCC
Confidence 4689999999999999999998 7777776 8899999999977 99999999999998 789999999
Q ss_pred CCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhh
Q 041572 155 GVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEH 202 (313)
Q Consensus 155 G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~ 202 (313)
|+||||+|+..|+. .+...+++...+ ....|++|.||+++|....
T Consensus 207 g~TpLh~A~~~g~~-~~v~~Ll~~ga~--~~~~d~~g~tpl~~A~~~~ 251 (497)
T 3lvq_E 207 GNTALHYAALYNQP-DCLKLLLKGRAL--VGTVNEAGETALDIARKKH 251 (497)
T ss_dssp SCCHHHHHTTTTCH-HHHHHHHHTCCC--CSCCCTTCCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCH-HHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcC
Confidence 99999999999987 344444443333 3344899999999998754
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.61 E-value=8.5e-16 Score=137.54 Aligned_cols=113 Identities=14% Similarity=0.065 Sum_probs=92.7
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhhCCCC-----cccccCCCChHHHHHHHc---CCHHHHHHHHcCCcccccccccccCC
Q 041572 83 LKKPMFTAAKFGIYEIVMEIIISYFPWS-----LSFSNEDGDDIFHAAVKH---RQENVFNIIFNMPKAQTFFVADIDVK 154 (313)
Q Consensus 83 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~-----~~~~d~~G~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~in~~d~~ 154 (313)
..++||.|+..|+.+.++.+++. ..+. ++..|..|+||||+|+.. |+.+++++|++.| +++|.+|.+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g----a~in~~d~~ 204 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS----GNLDKQTGK 204 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC----SCTTCCCTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC----CCccccCCC
Confidence 35799999999999999999998 3332 444588999999999999 8999999999998 789999999
Q ss_pred CCCHHHHHHhcCCCCCcchHHhhhhHHhhhhhhcCCCCChhhhhhHhhh
Q 041572 155 GVNILHSAARSVPSSEVSGAALQMQRELQWFKLNDKDKTPRELFTEEHK 203 (313)
Q Consensus 155 G~TpLH~Aa~~~~~~~i~~~~l~~~~~l~~~~~n~~G~Tp~dla~~~~~ 203 (313)
|+||||+|+..|+. .+...+++... +....|++|.||+++|.+...
T Consensus 205 g~TpLh~A~~~g~~-~~v~~Ll~~ga--d~~~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 205 GSTALHYCCLTDNA-ECLKLLLRGKA--SIEIANESGETPLDIAKRLKH 250 (278)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCH-HHHHHHHHcCC--CCCCccCCCCCHHHHHHHcCC
Confidence 99999999999987 34444444333 334459999999999987543
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.52 E-value=9.5e-15 Score=111.92 Aligned_cols=90 Identities=14% Similarity=0.173 Sum_probs=74.6
Q ss_pred CCCCCCccccccccCCCcchhhhhhhccCCCCCchhHhhhhhccccHHHHHHHHHHHhccccccchhhhhcCCCCcHHHH
Q 041572 10 ENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPSIKSIRNTKLTHKQTLEILRIICVGAVDIATAAKETENVLKKPMFT 89 (313)
Q Consensus 10 ~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~~~il~~l~~~~~~~~~~~~~~d~~g~tpLh~ 89 (313)
.+.+|.|+||.|+..+.. ++++.|+++ ..++ +.+|..|+||||+
T Consensus 20 ~~~~g~t~L~~A~~~g~~--------------------------------~~v~~Ll~~-g~~i---~~~d~~g~tpLh~ 63 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQD--------------------------------DEVRILMAN-GADV---AAKDKNGSTPLHL 63 (110)
T ss_dssp --CCHHHHHHHHHHHTCH--------------------------------HHHHHHHHT-TCCT---TCCCTTCCCHHHH
T ss_pred cCCccchHHHHHHHcCCH--------------------------------HHHHHHHHc-CCCC---CccCCCCCCHHHH
Confidence 367778888888765443 347888887 3433 3478899999999
Q ss_pred HHHhCcHHHHHHHHHhhCCCCcccccCCCChHHHHHHHcCCHHHHHHH
Q 041572 90 AAKFGIYEIVMEIIISYFPWSLSFSNEDGDDIFHAAVKHRQENVFNII 137 (313)
Q Consensus 90 Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~L 137 (313)
|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|
T Consensus 64 A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 64 AARNGHLEVVKLLLEA--GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHc--CCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999998 788999999999999999999999999986
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.51 E-value=7.1e-16 Score=143.91 Aligned_cols=154 Identities=9% Similarity=-0.023 Sum_probs=110.4
Q ss_pred CCCCCCCccccccccCCCcchhhhhhhccCCCCCch---hHhhhhhccccHHHH----HHHHHHHhccccccchhhhhcC
Q 041572 9 SENADGDLEKQLSETSPFAFGLYISYFYLNPYYPPS---IKSIRNTKLTHKQTL----EILRIICVGAVDIATAAKETEN 81 (313)
Q Consensus 9 ~~n~~g~t~l~l~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~k~~~~~~~----~il~~l~~~~~~~~~~~~~~d~ 81 (313)
..+.++.||||.|++.|.... ..+.++.+.... ..+..+.+..|.++. ++++.|+++ ..+....+..+.
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~---v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~ 162 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSA---LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAE 162 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHH---HHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHH
T ss_pred HcCCCcCCHHHHHHHcCCHHH---HHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCC
Confidence 345677899999999988776 233334332111 112233446666664 899999999 332221222333
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhhCCCCccc--ccCCCChHHHHHH-HcCCHHHHHHHHcCCcccccccccccCCCCCH
Q 041572 82 VLKKPMFTAAKFGIYEIVMEIIISYFPWSLSF--SNEDGDDIFHAAV-KHRQENVFNIIFNMPKAQTFFVADIDVKGVNI 158 (313)
Q Consensus 82 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~--~d~~G~t~Lh~A~-~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 158 (313)
+ +||||+||..|+.++++.|++. +.+++. .|..|+||||+|+ .+|+.+++++|++.+ + .|+||
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~--ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g----a-------~~~ta 228 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCEL--APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP----V-------MLAYA 228 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHS--CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH----H-------HHHHH
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHc--CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC----C-------ccchH
Confidence 3 8999999999999999999998 666666 8889999999999 999999999999965 2 28999
Q ss_pred HHHHHhcCCCCCcchHHhhhhHH
Q 041572 159 LHSAARSVPSSEVSGAALQMQRE 181 (313)
Q Consensus 159 LH~Aa~~~~~~~i~~~~l~~~~~ 181 (313)
||+|++.|+.+ +...+++...+
T Consensus 229 L~~Aa~~g~~e-vv~lL~~~ga~ 250 (376)
T 2aja_A 229 EIHEFEYGEKY-VNPFIARHVNR 250 (376)
T ss_dssp HHCTTTTTTTT-HHHHHHHHHHH
T ss_pred HHHHHHCCCHH-HHHHHHhcCcc
Confidence 99999999984 55555544333
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=32.62 E-value=29 Score=20.35 Aligned_cols=20 Identities=25% Similarity=0.084 Sum_probs=16.4
Q ss_pred HHHHHHHhCcHHHHHHHHHh
Q 041572 86 PMFTAAKFGIYEIVMEIIIS 105 (313)
Q Consensus 86 pLh~Aa~~G~~~~v~~Ll~~ 105 (313)
-+..||..|+.+.++.|=..
T Consensus 16 qiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHH
Confidence 56889999999999887543
Done!