Query 041573
Match_columns 238
No_of_seqs 233 out of 3196
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 14:24:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 9.4E-39 3.2E-43 239.1 19.5 159 5-164 5-163 (169)
2 3v31_A Ankyrin repeat family A 100.0 7.3E-36 2.5E-40 222.6 17.2 160 2-162 1-160 (167)
3 3f6q_A Integrin-linked protein 100.0 3.5E-35 1.2E-39 221.5 19.9 165 3-167 4-168 (179)
4 3v30_A DNA-binding protein rfx 100.0 1.5E-35 5.2E-40 221.9 15.6 162 4-165 2-163 (172)
5 1oy3_D Transcription factor in 100.0 2.8E-35 9.7E-40 236.4 17.8 168 3-171 44-259 (282)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.4E-35 2.9E-39 217.5 19.1 157 3-160 13-169 (169)
7 3twr_A Tankyrase-2; ankyrin re 100.0 5.2E-35 1.8E-39 217.6 17.5 158 3-161 7-164 (165)
8 4b93_B Ankyrin repeat domain-c 100.0 1.3E-35 4.6E-40 238.0 14.8 173 3-175 51-223 (269)
9 2rfm_A Putative ankyrin repeat 100.0 2.8E-35 9.6E-40 224.4 15.2 157 3-160 34-190 (192)
10 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.9E-35 3E-39 215.5 16.4 157 3-161 4-161 (162)
11 3aji_A 26S proteasome non-ATPa 100.0 4.3E-34 1.5E-38 223.5 20.0 165 3-168 39-203 (231)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 2.2E-34 7.6E-39 228.7 18.5 167 3-170 56-223 (253)
13 2rfa_A Transient receptor pote 100.0 2.4E-34 8.1E-39 225.2 18.4 162 3-164 2-185 (232)
14 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-34 4.5E-39 227.5 16.8 164 3-167 44-214 (236)
15 1awc_B Protein (GA binding pro 100.0 3.7E-34 1.3E-38 210.5 17.4 151 4-156 2-152 (153)
16 1oy3_D Transcription factor in 100.0 1.5E-34 5.2E-39 232.2 16.4 170 3-173 8-228 (282)
17 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.5E-34 1.2E-38 211.0 16.7 154 4-159 2-155 (156)
18 4b93_B Ankyrin repeat domain-c 100.0 1.5E-34 5E-39 232.0 15.8 157 3-160 85-242 (269)
19 2f8y_A Notch homolog 1, transl 100.0 1.3E-33 4.3E-38 219.7 20.4 166 3-169 24-190 (223)
20 2f8y_A Notch homolog 1, transl 100.0 1.8E-33 6.3E-38 218.8 19.6 161 3-163 57-217 (223)
21 2dzn_A Probable 26S proteasome 100.0 3.4E-33 1.2E-37 217.9 20.7 168 3-171 35-209 (228)
22 3hra_A Ankyrin repeat family p 100.0 1.8E-33 6E-38 215.5 18.1 170 3-172 4-180 (201)
23 2xai_A ASB-9, ankyrin repeat a 100.0 1.8E-33 6.2E-38 224.5 18.7 160 3-164 2-161 (261)
24 1yyh_A HN1;, notch 1, ankyrin 100.0 8.9E-34 3E-38 225.2 16.6 161 3-163 89-249 (253)
25 3aji_A 26S proteasome non-ATPa 100.0 3.2E-33 1.1E-37 218.6 19.4 158 3-161 72-229 (231)
26 1s70_B 130 kDa myosin-binding 100.0 2.6E-33 9E-38 227.1 19.5 168 3-171 39-266 (299)
27 3hra_A Ankyrin repeat family p 100.0 4.1E-33 1.4E-37 213.5 19.3 157 3-160 38-201 (201)
28 1k1a_A B-cell lymphoma 3-encod 100.0 5E-33 1.7E-37 218.5 20.2 164 3-166 8-212 (241)
29 2xai_A ASB-9, ankyrin repeat a 100.0 6E-33 2.1E-37 221.4 20.5 171 3-176 35-205 (261)
30 2rfa_A Transient receptor pote 100.0 2.1E-33 7.2E-38 219.8 16.6 161 3-164 36-224 (232)
31 3b7b_A Euchromatic histone-lys 100.0 8.1E-33 2.8E-37 217.1 19.9 167 3-170 10-177 (237)
32 3b7b_A Euchromatic histone-lys 100.0 1.1E-32 3.8E-37 216.3 20.0 168 3-171 43-211 (237)
33 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-32 6.5E-37 226.2 21.3 167 3-170 57-313 (351)
34 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-32 5.2E-37 215.8 19.7 137 31-167 2-146 (241)
35 4hbd_A KN motif and ankyrin re 100.0 3.7E-33 1.2E-37 224.6 15.6 160 2-161 109-274 (276)
36 2dzn_A Probable 26S proteasome 100.0 1.8E-32 6E-37 213.8 18.8 167 4-170 2-174 (228)
37 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-32 4.2E-37 222.5 18.4 160 3-164 58-217 (285)
38 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-32 1E-36 220.3 20.6 168 3-173 91-258 (285)
39 1ikn_D Protein (I-kappa-B-alph 100.0 7.8E-34 2.7E-38 223.0 10.6 171 3-173 7-187 (236)
40 2etb_A Transient receptor pote 100.0 1.4E-33 4.8E-38 224.2 11.7 160 3-163 42-247 (256)
41 3ljn_A Hypothetical protein; a 100.0 1.4E-32 4.7E-37 229.2 17.2 167 3-170 19-244 (364)
42 2pnn_A Transient receptor pote 100.0 6.8E-33 2.3E-37 222.3 14.7 161 3-164 53-261 (273)
43 4gpm_A Engineered protein OR26 100.0 2.3E-32 7.7E-37 204.4 16.5 129 3-132 36-164 (169)
44 3jxi_A Vanilloid receptor-rela 100.0 4.6E-33 1.6E-37 221.6 12.3 161 3-163 45-251 (260)
45 2etb_A Transient receptor pote 100.0 2.2E-33 7.4E-38 223.1 9.9 160 4-163 2-207 (256)
46 1s70_B 130 kDa myosin-binding 100.0 9.9E-32 3.4E-36 217.9 18.5 157 3-161 72-288 (299)
47 1n11_A Ankyrin; clathrin, BAND 100.0 1E-31 3.5E-36 228.9 19.2 170 3-173 211-380 (437)
48 3kea_A K1L; tropism, ANK repea 100.0 8.1E-33 2.8E-37 223.6 11.4 158 3-164 30-188 (285)
49 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.3E-33 2.8E-37 218.0 11.1 163 3-167 4-169 (239)
50 3kea_A K1L; tropism, ANK repea 100.0 2.1E-32 7E-37 221.2 12.9 163 3-167 61-225 (285)
51 3ljn_A Hypothetical protein; a 100.0 2.8E-32 9.6E-37 227.3 13.7 161 3-163 83-270 (364)
52 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-31 6.3E-36 227.4 18.5 167 3-170 13-179 (437)
53 1wdy_A 2-5A-dependent ribonucl 100.0 6.2E-31 2.1E-35 211.0 20.4 164 3-167 104-283 (285)
54 1wdy_A 2-5A-dependent ribonucl 100.0 7E-31 2.4E-35 210.6 20.2 165 3-168 4-180 (285)
55 3t8k_A Uncharacterized protein 100.0 4E-33 1.4E-37 211.7 6.1 159 4-165 6-182 (186)
56 2fo1_E LIN-12 protein; beta-ba 100.0 2.3E-31 7.9E-36 222.8 16.5 167 3-170 165-346 (373)
57 4g8k_A 2-5A-dependent ribonucl 100.0 5.6E-31 1.9E-35 217.2 18.2 160 3-167 167-331 (337)
58 2pnn_A Transient receptor pote 100.0 6.3E-32 2.2E-36 216.7 11.4 163 3-165 12-221 (273)
59 1d9s_A Cyclin-dependent kinase 100.0 1.5E-31 5.3E-36 192.8 12.3 133 28-161 2-135 (136)
60 3utm_A Tankyrase-1; tankyrase, 100.0 1.7E-30 5.8E-35 214.5 20.2 132 3-134 23-154 (351)
61 1bi7_B P16INK4A, MTS1, multipl 100.0 6.5E-32 2.2E-36 199.2 10.5 141 2-144 10-151 (156)
62 3eu9_A Huntingtin-interacting 100.0 7.9E-31 2.7E-35 205.4 16.4 166 3-169 41-209 (240)
63 2fo1_E LIN-12 protein; beta-ba 100.0 5E-31 1.7E-35 220.8 14.8 159 3-162 198-371 (373)
64 1sw6_A Regulatory protein SWI6 100.0 1.3E-31 4.3E-36 220.7 10.9 165 8-173 101-319 (327)
65 3c5r_A BARD-1, BRCA1-associate 100.0 1E-30 3.6E-35 188.5 13.5 133 28-161 1-133 (137)
66 3jxi_A Vanilloid receptor-rela 100.0 2.4E-31 8E-36 211.7 10.7 162 3-164 4-212 (260)
67 3eu9_A Huntingtin-interacting 100.0 7.7E-30 2.6E-34 199.8 18.0 165 3-168 8-174 (240)
68 3v30_A DNA-binding protein rfx 100.0 3E-30 1E-34 193.0 13.2 137 3-140 35-171 (172)
69 1d9s_A Cyclin-dependent kinase 100.0 1.8E-30 6.2E-35 187.2 10.9 126 2-129 10-136 (136)
70 2vge_A RELA-associated inhibit 100.0 7.1E-32 2.4E-36 211.4 2.7 139 3-142 20-161 (229)
71 2jab_A H10-2-G3; HER2, darpin, 100.0 3.3E-29 1.1E-33 180.5 15.8 123 4-127 14-136 (136)
72 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.6E-29 1.2E-33 177.1 15.4 126 3-129 1-126 (126)
73 4g8k_A 2-5A-dependent ribonucl 100.0 8.6E-29 2.9E-33 204.1 20.0 163 3-166 24-235 (337)
74 4hbd_A KN motif and ankyrin re 100.0 2.4E-30 8.4E-35 208.1 9.7 167 4-170 76-250 (276)
75 2rfm_A Putative ankyrin repeat 100.0 2.1E-29 7.1E-34 191.8 13.3 140 30-169 27-166 (192)
76 1sw6_A Regulatory protein SWI6 100.0 6.2E-30 2.1E-34 210.5 11.1 145 3-148 130-327 (327)
77 2jab_A H10-2-G3; HER2, darpin, 100.0 2.5E-29 8.7E-34 181.1 12.6 126 35-160 11-136 (136)
78 1bi7_B P16INK4A, MTS1, multipl 100.0 7.3E-30 2.5E-34 188.2 9.4 138 32-170 6-144 (156)
79 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.1E-28 3.9E-33 174.6 14.8 125 37-161 1-125 (126)
80 3aaa_C Myotrophin, protein V-1 100.0 6.4E-29 2.2E-33 175.9 13.2 120 35-154 4-123 (123)
81 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.4E-28 8.3E-33 180.7 14.0 125 3-129 37-162 (162)
82 3f6q_A Integrin-linked protein 100.0 1.5E-28 5.3E-33 185.0 13.1 134 3-137 38-171 (179)
83 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.8E-29 1.3E-33 197.0 9.7 146 3-149 36-193 (239)
84 3v31_A Ankyrin repeat family A 100.0 3.9E-28 1.3E-32 180.6 14.6 133 37-169 2-134 (167)
85 2vge_A RELA-associated inhibit 100.0 1.4E-28 4.8E-33 192.7 12.7 145 24-168 4-154 (229)
86 3deo_A Signal recognition part 100.0 3.1E-28 1.1E-32 184.1 14.1 138 3-159 43-181 (183)
87 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.3E-27 4.3E-32 178.4 16.5 124 3-127 46-169 (169)
88 3ui2_A Signal recognition part 100.0 7.8E-28 2.7E-32 190.1 15.7 140 3-161 44-184 (244)
89 3ehr_A Osteoclast-stimulating 100.0 1.1E-28 3.7E-33 192.1 10.3 136 35-170 70-206 (222)
90 1awc_B Protein (GA binding pro 100.0 1.3E-27 4.4E-32 175.4 15.5 120 3-123 33-152 (153)
91 3twr_A Tankyrase-2; ankyrin re 100.0 4.6E-28 1.6E-32 179.9 12.8 124 3-128 41-164 (165)
92 2b0o_E UPLC1; arfgap, structur 100.0 3.7E-28 1.3E-32 197.7 12.1 140 4-150 151-299 (301)
93 3ehr_A Osteoclast-stimulating 99.9 4.4E-28 1.5E-32 188.6 8.8 135 3-138 72-207 (222)
94 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.6E-27 3E-31 171.3 14.4 121 3-126 35-155 (156)
95 3t8k_A Uncharacterized protein 99.9 4.3E-28 1.5E-32 183.9 7.5 131 3-134 37-184 (186)
96 3c5r_A BARD-1, BRCA1-associate 99.9 6E-28 2E-32 174.0 7.5 125 3-128 9-133 (137)
97 3aaa_C Myotrophin, protein V-1 99.9 5.3E-27 1.8E-31 166.0 10.9 110 3-113 6-115 (123)
98 3lvq_E ARF-GAP with SH3 domain 99.9 3.8E-26 1.3E-30 197.9 15.6 135 4-145 132-275 (497)
99 3jue_A Arfgap with coiled-coil 99.9 6.6E-26 2.3E-30 188.8 14.5 142 4-146 199-346 (368)
100 3deo_A Signal recognition part 99.9 3.8E-26 1.3E-30 172.6 11.5 115 35-150 41-156 (183)
101 1dcq_A PYK2-associated protein 99.9 1.1E-25 3.8E-30 181.1 13.9 124 38-161 130-262 (278)
102 2aja_A Ankyrin repeat family p 99.9 1.1E-27 3.8E-32 200.1 1.7 152 3-163 91-251 (376)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.8E-25 1.3E-29 148.7 12.5 93 37-129 1-93 (93)
104 1dcq_A PYK2-associated protein 99.9 1.5E-24 5.1E-29 174.5 16.7 124 5-129 131-263 (278)
105 3ui2_A Signal recognition part 99.9 1.9E-25 6.4E-30 176.5 10.8 110 36-146 43-153 (244)
106 2l6b_A NR1C; ankyrin, consensu 99.9 1.2E-25 4.1E-30 157.0 8.5 110 32-141 3-112 (115)
107 3lvq_E ARF-GAP with SH3 domain 99.9 5.4E-25 1.8E-29 190.7 13.0 129 38-166 132-269 (497)
108 3jue_A Arfgap with coiled-coil 99.9 5.7E-25 1.9E-29 183.2 12.3 127 36-162 197-326 (368)
109 2b0o_E UPLC1; arfgap, structur 99.9 2.1E-24 7.3E-29 175.5 14.0 125 38-162 151-284 (301)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-23 4.5E-28 141.1 12.0 93 3-96 1-93 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.9 2.3E-23 7.9E-28 145.3 7.8 105 3-108 8-112 (115)
112 2aja_A Ankyrin repeat family p 99.9 4.7E-24 1.6E-28 178.2 3.2 146 6-160 67-222 (376)
113 2zgd_A 3 repeat synthetic anky 99.9 1.7E-21 5.8E-26 134.9 9.9 92 32-123 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 7.3E-21 2.5E-25 131.7 9.7 93 64-156 17-109 (110)
115 4g26_A Pentatricopeptide repea 51.2 19 0.00064 30.6 4.8 118 8-132 33-175 (501)
116 3zrh_A Ubiquitin thioesterase 42.5 71 0.0024 26.5 6.5 23 70-92 68-90 (454)
117 1gp8_A Protein (scaffolding pr 42.1 26 0.00089 18.2 2.6 16 7-22 16-31 (40)
118 3zrh_A Ubiquitin thioesterase 41.8 78 0.0027 26.3 6.7 60 47-125 31-90 (454)
119 3mkq_B Coatomer subunit alpha; 39.5 1E+02 0.0036 22.1 6.9 132 3-159 7-140 (177)
120 3spa_A Mtrpol, DNA-directed RN 33.4 44 0.0015 31.6 4.4 91 41-135 133-239 (1134)
121 4g26_A Pentatricopeptide repea 26.5 1.6E+02 0.0055 24.8 6.7 102 25-132 97-210 (501)
122 3spa_A Mtrpol, DNA-directed RN 21.1 82 0.0028 29.8 3.9 92 5-100 131-237 (1134)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=9.4e-39 Score=239.15 Aligned_cols=159 Identities=38% Similarity=0.550 Sum_probs=149.6
Q ss_pred hHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCH
Q 041573 5 EEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHL 84 (238)
Q Consensus 5 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 84 (238)
.+.|+.||..|+.++|+.| +..|+++|.+|..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 5 g~~L~~Aa~~G~~~~v~~L-l~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDL-IENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHH-HHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH
Confidence 3679999999999999954 578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCC
Q 041573 85 EVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPN 164 (238)
Q Consensus 85 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~ 164 (238)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..+..+++++|++.+++.+
T Consensus 84 ~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 84 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987653
No 2
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=7.3e-36 Score=222.62 Aligned_cols=160 Identities=33% Similarity=0.430 Sum_probs=153.5
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHc
Q 041573 2 GNREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 2 ~~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 81 (238)
|.|.||||.|+..|+.++++.|+. .+.+++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 1 G~~~t~L~~A~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 1 GANSLSVHQLAAQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp CTTCCCHHHHHHTTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCcchHHHHHHCCCHHHHHHHHH-cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 789999999999999999996664 4788999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|.+...
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred C
Q 041573 162 K 162 (238)
Q Consensus 162 ~ 162 (238)
+
T Consensus 160 ~ 160 (167)
T 3v31_A 160 K 160 (167)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.5e-35 Score=221.51 Aligned_cols=165 Identities=26% Similarity=0.360 Sum_probs=156.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.+.++||.||..|+.++++.|+...+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 46789999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+...+++.|++.+.+
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN 163 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCC
Q 041573 163 PNLNG 167 (238)
Q Consensus 163 ~~~~~ 167 (238)
.+...
T Consensus 164 ~~~~~ 168 (179)
T 3f6q_A 164 LNRIP 168 (179)
T ss_dssp CSCBC
T ss_pred cccCC
Confidence 86543
No 4
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.5e-35 Score=221.93 Aligned_cols=162 Identities=32% Similarity=0.388 Sum_probs=153.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCC
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGH 83 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 83 (238)
+.+|||.|+..|+.++++.++...+..++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 56899999999999999988877666689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCC
Q 041573 84 LEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKP 163 (238)
Q Consensus 84 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 163 (238)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888655
Q ss_pred CC
Q 041573 164 NL 165 (238)
Q Consensus 164 ~~ 165 (238)
..
T Consensus 162 ~~ 163 (172)
T 3v30_A 162 FQ 163 (172)
T ss_dssp SC
T ss_pred hc
Confidence 43
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.8e-35 Score=236.44 Aligned_cols=168 Identities=25% Similarity=0.314 Sum_probs=111.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------------------
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKAD------------------- 63 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~------------------- 63 (238)
.|+||||+||..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|+++|+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 122 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVE-KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcc
Confidence 3556666666666666665 33345566666666666666666666666666666655443
Q ss_pred ----------------------------cCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccC-CCcHHHHHHHC
Q 041573 64 ----------------------------VGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRK-GLNPLHYAVQG 114 (238)
Q Consensus 64 ----------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~ 114 (238)
++..+..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202 (282)
T ss_dssp ---------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred hhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc
Confidence 4455556667777777777777777777777777777643 77777777777
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCcC
Q 041573 115 SHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEKA 171 (238)
Q Consensus 115 g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~ 171 (238)
|+.+++++|+++|++++.+|..|+||||+|+..+..+++++|++.+.+++.....+.
T Consensus 203 ~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 259 (282)
T 1oy3_D 203 QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKL 259 (282)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----
T ss_pred CCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCccc
Confidence 777777777777777777777777777777777777777777777777665554443
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=8.4e-35 Score=217.51 Aligned_cols=157 Identities=36% Similarity=0.544 Sum_probs=150.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.+.++|+.||..|+.++|+.| ...+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRIL-MANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccchHHHHHHcCCHHHHHHH-HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 468999999999999999955 4679999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhc
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSS 160 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 160 (238)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|++.+
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998653
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=5.2e-35 Score=217.59 Aligned_cols=158 Identities=30% Similarity=0.453 Sum_probs=149.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|.++||.|+..|+.++++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999998887788899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. +..+++++|++.++
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999887 77799999987653
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=238.05 Aligned_cols=173 Identities=28% Similarity=0.383 Sum_probs=117.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.+.||||.|+..++...+..+|...|+++|.+|.+|+||||+|+..|+.+++++|++.|++++..+..|.||+|+|+..+
T Consensus 51 ~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~ 130 (269)
T 4b93_B 51 EFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQG 130 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccC
Confidence 46677888877776653333566777888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+..+++++|++.+.+
T Consensus 131 ~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad 210 (269)
T 4b93_B 131 HFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS 210 (269)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888887777
Q ss_pred CCCCCCCcCCccc
Q 041573 163 PNLNGKEKAGESE 175 (238)
Q Consensus 163 ~~~~~~~~~~~~~ 175 (238)
++.....+..+..
T Consensus 211 ~~~~d~~G~TpL~ 223 (269)
T 4b93_B 211 VQVLNKRQRTAVD 223 (269)
T ss_dssp SCCCCTTSCCSGG
T ss_pred CCCcCCCCCCHHH
Confidence 7666555444433
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.8e-35 Score=224.37 Aligned_cols=157 Identities=20% Similarity=0.220 Sum_probs=151.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.|+..|+.++++.|+ ..+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLV-ENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHH-HHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 6899999999999999999665 558899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhc
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSS 160 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 160 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|++.+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998765
No 10
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=8.9e-35 Score=215.49 Aligned_cols=157 Identities=27% Similarity=0.404 Sum_probs=149.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
...|+||.|+..|+.++++.|+ ..+.+++.++..|.||||+|+. |+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 5689999999999999999555 6889999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCC-ccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGAS-LTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|++.++
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999998 59999999999999999999999999998875
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.3e-34 Score=223.50 Aligned_cols=165 Identities=27% Similarity=0.355 Sum_probs=137.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.|+..|+.++++.|+ ..+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 5778888888888888888444 567888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+
T Consensus 118 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888777
Q ss_pred CCCCCC
Q 041573 163 PNLNGK 168 (238)
Q Consensus 163 ~~~~~~ 168 (238)
++....
T Consensus 198 ~~~~~~ 203 (231)
T 3aji_A 198 IYIENK 203 (231)
T ss_dssp SCCCCT
T ss_pred CCCCCC
Confidence 655443
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.2e-34 Score=228.67 Aligned_cols=167 Identities=25% Similarity=0.314 Sum_probs=157.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKA-DVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~ 81 (238)
.|+||||+|+..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+..
T Consensus 56 ~g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 134 (253)
T 1yyh_A 56 TGETALHLAARYSRSDAAK-RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134 (253)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Confidence 6899999999999999999 5556799999999999999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCc
Q 041573 162 KPNLNGKEK 170 (238)
Q Consensus 162 ~~~~~~~~~ 170 (238)
+++.....+
T Consensus 215 ~~~~~d~~g 223 (253)
T 1yyh_A 215 NRDITDHMD 223 (253)
T ss_dssp CTTCCCTTC
T ss_pred CccccccCC
Confidence 876655444
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-34 Score=225.23 Aligned_cols=162 Identities=24% Similarity=0.332 Sum_probs=151.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-----CccccCCchHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADV-----GAAAMDDMSAIHF 77 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~-----~~~~~~g~t~L~~ 77 (238)
-|+||||.|+..|+.++++.|+...+++++.+|..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 37999999999999999998887779999999999999999999999999999999999987 6777899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCcccccc-------------CCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhh
Q 041573 78 ASQKGHLEVVRTLVSSGVSIKACTR-------------KGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLA 144 (238)
Q Consensus 78 A~~~~~~~~v~~Ll~~g~~~~~~~~-------------~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A 144 (238)
|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998875 799999999999999999999999999999999999999999
Q ss_pred cchhHHHHH----HHHHhhcCCCC
Q 041573 145 RNEEIRSFL----EEWEQSSKKPN 164 (238)
Q Consensus 145 ~~~~~~~~~----~~l~~~~~~~~ 164 (238)
+..+..+++ ++|+..+....
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred HHcCChHHHHHHHHHHHhcCCchh
Confidence 988888777 88988887653
No 14
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-34 Score=227.47 Aligned_cols=164 Identities=26% Similarity=0.312 Sum_probs=143.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC------cCccccCCchHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKAD------VGAAAMDDMSAIH 76 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~------~~~~~~~g~t~L~ 76 (238)
.|+||||+|+..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||
T Consensus 44 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAE-ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHH-CCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 5789999999999999998 55577888998999999999999999999999999998876 4667778899999
Q ss_pred HHHHcCCHHHHHHHHHCCCCcccccc-CCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHH
Q 041573 77 FASQKGHLEVVRTLVSSGVSIKACTR-KGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEE 155 (238)
Q Consensus 77 ~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 155 (238)
+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~ 202 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQ 202 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHH
Confidence 99999999999999999999998887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCC
Q 041573 156 WEQSSKKPNLNG 167 (238)
Q Consensus 156 l~~~~~~~~~~~ 167 (238)
|++.+.++....
T Consensus 203 Ll~~ga~~~~~~ 214 (236)
T 1ikn_D 203 LGQLTLENLQML 214 (236)
T ss_dssp HHTTSCGGGSSC
T ss_pred HHHcchhhhhcC
Confidence 998887664333
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-34 Score=210.51 Aligned_cols=151 Identities=26% Similarity=0.392 Sum_probs=143.3
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCC
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGH 83 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 83 (238)
..++||.|+..|+.++++.|+. .+.+++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMA-NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHH-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 5789999999999999996664 466665 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHH
Q 041573 84 LEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEW 156 (238)
Q Consensus 84 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l 156 (238)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.5e-34 Score=232.16 Aligned_cols=170 Identities=26% Similarity=0.296 Sum_probs=155.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLS---VNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFAS 79 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 79 (238)
+|+||||+||..|+.++|+.|+ ..+.+ ++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLL-GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHH-HHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-hcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 7899999999999999999666 44555 8899999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCC-----------------------------------------------ccccccCCCcHHHHHH
Q 041573 80 QKGHLEVVRTLVSSGVS-----------------------------------------------IKACTRKGLNPLHYAV 112 (238)
Q Consensus 80 ~~~~~~~v~~Ll~~g~~-----------------------------------------------~~~~~~~g~t~L~~A~ 112 (238)
..|+.+++++|+++|++ ++..+..|.||||+|+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 166 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHH
Confidence 99999999999998765 6778889999999999
Q ss_pred HCCCHHHHHHHHhcCCCccccCCC-CCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCcCCc
Q 041573 113 QGSHLELVKYLLRKGASLTAKTKA-GKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEKAGE 173 (238)
Q Consensus 113 ~~g~~~~~~~Ll~~g~~~~~~~~~-g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (238)
..|+.+++++|+++|++++..+.. |+||||+|+..+..+++++|++.+.+++.....+...
T Consensus 167 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tp 228 (282)
T 1oy3_D 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP 228 (282)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCH
Confidence 999999999999999999999865 9999999999999999999999998887766554433
No 17
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=3.5e-34 Score=211.05 Aligned_cols=154 Identities=25% Similarity=0.405 Sum_probs=148.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCC
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGH 83 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 83 (238)
+.|+||.|+..|+.++++.|+...+.+++..+..|.||||+ +..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57999999999999999988877677999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhh
Q 041573 84 LEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQS 159 (238)
Q Consensus 84 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~ 159 (238)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++. ++++.+|..|.||||+|+..+..+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 99999999999999999999999999998764
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=232.00 Aligned_cols=157 Identities=29% Similarity=0.406 Sum_probs=144.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||+||..|+.++++ +|...+++++.++..|.||+|+|+..++.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~-~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIP-LLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHH-HHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 6899999999999999999 555789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhH-HHHHHHHHhhc
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEI-RSFLEEWEQSS 160 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~-~~~~~~l~~~~ 160 (238)
+.+++++|+++|++++.++..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.++. .++++.+...+
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999987664 45555444433
No 19
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-33 Score=219.71 Aligned_cols=166 Identities=25% Similarity=0.320 Sum_probs=155.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKA-DVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~ 81 (238)
+|+||||+|+..|+.++++.|+ ..+++++..+..|.||||+|+..|+.+++++|++.++ +++..+..|.||||+|+..
T Consensus 24 ~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 24 TGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCCchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 6899999999999999999555 6789999999999999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCC
Q 041573 162 KPNLNGKE 169 (238)
Q Consensus 162 ~~~~~~~~ 169 (238)
+++.....
T Consensus 183 ~~~~~~~~ 190 (223)
T 2f8y_A 183 NRDITDHM 190 (223)
T ss_dssp CTTCCCTT
T ss_pred CCcccccc
Confidence 77655443
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.8e-33 Score=218.78 Aligned_cols=161 Identities=21% Similarity=0.248 Sum_probs=155.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||.|+..|+.++++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 57 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 57 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence 58899999999999999997777666799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|++.+..
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q 041573 163 P 163 (238)
Q Consensus 163 ~ 163 (238)
.
T Consensus 217 ~ 217 (223)
T 2f8y_A 217 R 217 (223)
T ss_dssp S
T ss_pred c
Confidence 5
No 21
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.4e-33 Score=217.86 Aligned_cols=168 Identities=24% Similarity=0.283 Sum_probs=143.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCC--CCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCcCccccCCchHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNP--LSVNS-RDKHSRTPLHLAAWSGQTEVVSYLCKNK--ADVGAAAMDDMSAIHF 77 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~--~~~~~-~~~~g~t~L~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~ 77 (238)
+|+||||+|+..|+.++++.|+ ..+ .+++. .+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~ 113 (228)
T 2dzn_A 35 DGRIPLHWSVSFQAHEITSFLL-SKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHH-HTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-hccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHH
Confidence 5788999999999999998554 555 56666 7788899999999999999999999988 8888888889999999
Q ss_pred HHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcC-CCccccCCCCCCHHHhhcchhHHHHHHHH
Q 041573 78 ASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKG-ASLTAKTKAGKTPLDLARNEEIRSFLEEW 156 (238)
Q Consensus 78 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~l 156 (238)
|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+++++|
T Consensus 114 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 193 (228)
T 2dzn_A 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL 193 (228)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 88999999999999999999999999998
Q ss_pred H-hhcCCCCCCCCCcC
Q 041573 157 E-QSSKKPNLNGKEKA 171 (238)
Q Consensus 157 ~-~~~~~~~~~~~~~~ 171 (238)
+ +.+.+++.....+.
T Consensus 194 l~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 194 VEKYGAEYDLVDNKGA 209 (228)
T ss_dssp HHHHCCCSCCBCTTSC
T ss_pred HHhcCCCCCccCCCCC
Confidence 8 77877766554443
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-33 Score=215.51 Aligned_cols=170 Identities=22% Similarity=0.270 Sum_probs=155.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.+.|+||.||..|+.+.++.+|...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 47899999999999999998888888899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-HCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcC-CCccccCCCCCCHHHhhcchhH-----HHHHHH
Q 041573 83 HLEVVRTLV-SSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKG-ASLTAKTKAGKTPLDLARNEEI-----RSFLEE 155 (238)
Q Consensus 83 ~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~-----~~~~~~ 155 (238)
+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+. .+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999 677899999999999999999999999999999998 9999999999999999986554 899999
Q ss_pred HHhhcCCCCCCCCCcCC
Q 041573 156 WEQSSKKPNLNGKEKAG 172 (238)
Q Consensus 156 l~~~~~~~~~~~~~~~~ 172 (238)
|++.+.+++.....+..
T Consensus 164 Ll~~ga~~~~~~~~g~t 180 (201)
T 3hra_A 164 LMENGADQSIKDNSGRT 180 (201)
T ss_dssp HHHTTCCTTCCCTTSCC
T ss_pred HHHCCCCCCccCCCCCC
Confidence 99999888776655443
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=224.47 Aligned_cols=160 Identities=26% Similarity=0.337 Sum_probs=99.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.||..|+.++++.|+ ..+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 4667777777777777776443 456667777777777777777777777777777777777766666666666666666
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 159 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 66666666666666553 23355555555555555555555555555555555555555555555555555555555544
Q ss_pred CC
Q 041573 163 PN 164 (238)
Q Consensus 163 ~~ 164 (238)
.+
T Consensus 160 ~~ 161 (261)
T 2xai_A 160 VN 161 (261)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 24
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.9e-34 Score=225.21 Aligned_cols=161 Identities=21% Similarity=0.254 Sum_probs=150.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||+|+..|+.++++.|+...+.+++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 89 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 168 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 168 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 58899999999999999997776656699999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+..++.+++++|......
T Consensus 169 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 169 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred C
Q 041573 163 P 163 (238)
Q Consensus 163 ~ 163 (238)
+
T Consensus 249 ~ 249 (253)
T 1yyh_A 249 H 249 (253)
T ss_dssp -
T ss_pred c
Confidence 4
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.2e-33 Score=218.58 Aligned_cols=158 Identities=30% Similarity=0.357 Sum_probs=152.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||.|+..|+.++++ +|...+.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 72 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 150 (231)
T 3aji_A 72 AGWSPLHIAASAGXDEIVK-ALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG 150 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCHHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 6899999999999999999 555779999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+...++++|.+.+.
T Consensus 151 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 151 NLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988764
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-33 Score=227.13 Aligned_cols=168 Identities=23% Similarity=0.270 Sum_probs=154.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|.|+||.||..|+.++|+.|+ ..|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHH-HHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 5789999999999999999655 568999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCcccccc------------------------------------------------------------
Q 041573 83 HLEVVRTLVSSGVSIKACTR------------------------------------------------------------ 102 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~------------------------------------------------------------ 102 (238)
+.+++++|+++|++++..+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 99999999999998876553
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCcC
Q 041573 103 KGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEKA 171 (238)
Q Consensus 103 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~ 171 (238)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+++.....+.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 266 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 477889999999999999999999999999999999999999999999999999999988766554443
No 27
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4.1e-33 Score=213.48 Aligned_cols=157 Identities=24% Similarity=0.351 Sum_probs=149.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLC-KNKADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 81 (238)
+|+||||.|+..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..
T Consensus 38 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAK-ALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 6899999999999999999 555779999999999999999999999999999999 66889999999999999999999
Q ss_pred CCHHHHHHHHHCC-CCccccccCCCcHHHHHHHCCC-----HHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHH
Q 041573 82 GHLEVVRTLVSSG-VSIKACTRKGLNPLHYAVQGSH-----LELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEE 155 (238)
Q Consensus 82 ~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~-----~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 155 (238)
|+.+++++|++.| ++++.++..|+||||+|+..+. .+++++|+++|++++.+|..|.||||+|+..+..+++++
T Consensus 117 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 117 GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196 (201)
T ss_dssp TCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHH
Confidence 9999999999999 9999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 041573 156 WEQSS 160 (238)
Q Consensus 156 l~~~~ 160 (238)
|++++
T Consensus 197 Ll~~G 201 (201)
T 3hra_A 197 LAQYN 201 (201)
T ss_dssp HHTCC
T ss_pred HHhcC
Confidence 98764
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5e-33 Score=218.52 Aligned_cols=164 Identities=27% Similarity=0.383 Sum_probs=90.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHH---hCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCc-------
Q 041573 3 NREEELHAAARSGDLKAVQSILI---SNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDM------- 72 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~------- 72 (238)
+|+||||.||..|+.++++.|+. ..+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 34555555555555555554442 24455555555555555555555555555555555555555444444
Q ss_pred ------------------------------hHHHHHHHcCCHHHHHHHHHCCCCccccc-cCCCcHHHHHHHCCCHHHHH
Q 041573 73 ------------------------------SAIHFASQKGHLEVVRTLVSSGVSIKACT-RKGLNPLHYAVQGSHLELVK 121 (238)
Q Consensus 73 ------------------------------t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~~~ 121 (238)
||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.++++
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 167 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ 167 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHH
Confidence 55555555555555555555555555555 45566666666666666666
Q ss_pred HHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCC
Q 041573 122 YLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLN 166 (238)
Q Consensus 122 ~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~ 166 (238)
+|+++|++++.+|..|.||||+|+..+..+++++|++.+.+++..
T Consensus 168 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 168 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCc
Confidence 666666666666666666666666666666666666655554433
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6e-33 Score=221.43 Aligned_cols=171 Identities=27% Similarity=0.308 Sum_probs=157.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|.||||+|+..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|
T Consensus 35 ~g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVK-ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRG 112 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 6899999999999999999 45567999999999999999999999999999999999999985 456999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..+..+++++|++.+.+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD 191 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999995 88999999999999999999999999988
Q ss_pred CCCCCCCcCCcccc
Q 041573 163 PNLNGKEKAGESET 176 (238)
Q Consensus 163 ~~~~~~~~~~~~~~ 176 (238)
++.....+......
T Consensus 192 ~~~~d~~g~tpl~~ 205 (261)
T 2xai_A 192 TQAKNAEGKRPVEL 205 (261)
T ss_dssp TTCCCTTSCCGGGG
T ss_pred CCCcCCCCCChhhh
Confidence 87666555444433
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-33 Score=219.83 Aligned_cols=161 Identities=25% Similarity=0.279 Sum_probs=148.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCc-----ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCcccc--------
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSV-----NSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAM-------- 69 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~-------- 69 (238)
+|+||||+|+..|+.++++.|+ ..+.++ +.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 114 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLM-EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRP 114 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecc
Confidence 6899999999999999999666 445554 66778999999999999999999999999999998876
Q ss_pred -----CCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHH----HHHHhcCCCc------cccC
Q 041573 70 -----DDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELV----KYLLRKGASL------TAKT 134 (238)
Q Consensus 70 -----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~----~~Ll~~g~~~------~~~~ 134 (238)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~ 194 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPN 194 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCC
Confidence 799999999999999999999999999999999999999999999999988 9999999998 6899
Q ss_pred CCCCCHHHhhcchhHHHHHHHHHhhcCCCC
Q 041573 135 KAGKTPLDLARNEEIRSFLEEWEQSSKKPN 164 (238)
Q Consensus 135 ~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~ 164 (238)
..|+||||+|+..++.+++++|++++....
T Consensus 195 ~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 195 NQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 999999999999999999999999886653
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.1e-33 Score=217.07 Aligned_cols=167 Identities=27% Similarity=0.389 Sum_probs=127.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.||..|+.+++++| ...|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHML-VQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHH-HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHH-HHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Confidence 577888888888888888744 4567777777777888888888888888888888888887777777778888888777
Q ss_pred CHHHHHHHHHCC-CCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 83 HLEVVRTLVSSG-VSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 83 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+..+++++|++.+.
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 168 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKC 168 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC
T ss_pred CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 777777777777 6777777777777777777777777777777777777777777777777777777777777777776
Q ss_pred CCCCCCCCc
Q 041573 162 KPNLNGKEK 170 (238)
Q Consensus 162 ~~~~~~~~~ 170 (238)
+++.....+
T Consensus 169 ~~~~~~~~g 177 (237)
T 3b7b_A 169 DLHAVNIHG 177 (237)
T ss_dssp CTTCCCTTC
T ss_pred CCCCcCCCC
Confidence 665554433
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.1e-32 Score=216.25 Aligned_cols=168 Identities=28% Similarity=0.373 Sum_probs=158.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNK-ADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 81 (238)
.|+||||.|+..|+.++++ +|...+++++.++..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..
T Consensus 43 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 121 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVK-YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY 121 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHhCCHHHHH-HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Confidence 6889999999999999999 555789999999999999999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.
T Consensus 122 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 201 (237)
T 3b7b_A 122 KHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS 201 (237)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCcC
Q 041573 162 KPNLNGKEKA 171 (238)
Q Consensus 162 ~~~~~~~~~~ 171 (238)
+++.....+.
T Consensus 202 d~~~~d~~g~ 211 (237)
T 3b7b_A 202 DVTLKNKEGE 211 (237)
T ss_dssp CTTCCCTTSC
T ss_pred CCCccCCCCC
Confidence 8766554443
No 33
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-32 Score=226.18 Aligned_cols=167 Identities=26% Similarity=0.334 Sum_probs=133.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||+|+..|+.++++. |...|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQL-LLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN 135 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHH-HHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 57788888888888888884 44668888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCC------------------------------------------------------------------
Q 041573 83 HLEVVRTLVSSGVS------------------------------------------------------------------ 96 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~------------------------------------------------------------------ 96 (238)
+.+++++|+++|++
T Consensus 136 ~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L 215 (351)
T 3utm_A 136 RVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL 215 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHH
T ss_pred CHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHH
Confidence 77777777665544
Q ss_pred ------------------------ccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHH
Q 041573 97 ------------------------IKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSF 152 (238)
Q Consensus 97 ------------------------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~ 152 (238)
++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..++
T Consensus 216 ~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~ 295 (351)
T 3utm_A 216 HCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQT 295 (351)
T ss_dssp HHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 45566677888888888888888888888888888888888888888888888888
Q ss_pred HHHHHhhcCCCCCCCCCc
Q 041573 153 LEEWEQSSKKPNLNGKEK 170 (238)
Q Consensus 153 ~~~l~~~~~~~~~~~~~~ 170 (238)
+++|++.+.+++.....+
T Consensus 296 v~~Ll~~gad~~~~~~~g 313 (351)
T 3utm_A 296 CRLLLSYGSDPSIISLQG 313 (351)
T ss_dssp HHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHcCCCCCCcCCCC
Confidence 888888877766555443
No 34
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-32 Score=215.80 Aligned_cols=137 Identities=25% Similarity=0.285 Sum_probs=124.1
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCc
Q 041573 31 VNSRDKHSRTPLHLAAWSGQTEVVSYLCK----NKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLN 106 (238)
Q Consensus 31 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 106 (238)
++.+|.+|.||||+||..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 35678999999999999999999999997 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCHHHHHHHHhcCC----CccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCC
Q 041573 107 PLHYAVQGSHLELVKYLLRKGA----SLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNG 167 (238)
Q Consensus 107 ~L~~A~~~g~~~~~~~Ll~~g~----~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~ 167 (238)
|||+|+..|+.+++++|++.++ +++..+..|.||||+|+..+..+++++|++.+.+.+...
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 146 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVD 146 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 9999999999999999999987 888899999999999999999999999999887776554
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=224.65 Aligned_cols=160 Identities=20% Similarity=0.272 Sum_probs=150.6
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHH-----HcCCHHHHHHHHHCCCCcCccccCCchHHH
Q 041573 2 GNREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAA-----WSGQTEVVSYLCKNKADVGAAAMDDMSAIH 76 (238)
Q Consensus 2 ~~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~-----~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 76 (238)
.+|+||||+||..|+.++++.|+.....+++..+..|.||||+|+ ..++.+++++|++.|.+++..+..|.||||
T Consensus 109 ~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 109 SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALM 188 (276)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 368999999999999999996665444599999999999999999 668999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHh-cCCCccccCCCCCCHHHhhcchhHHHHHHH
Q 041573 77 FASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLR-KGASLTAKTKAGKTPLDLARNEEIRSFLEE 155 (238)
Q Consensus 77 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 155 (238)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..+..+++++
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASM 268 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred HHhhcC
Q 041573 156 WEQSSK 161 (238)
Q Consensus 156 l~~~~~ 161 (238)
|++...
T Consensus 269 Ll~~~~ 274 (276)
T 4hbd_A 269 LYSRMN 274 (276)
T ss_dssp HHHHCC
T ss_pred HHhccC
Confidence 987753
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.8e-32 Score=213.81 Aligned_cols=167 Identities=26% Similarity=0.359 Sum_probs=152.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCcCc-cccCCchHHHHHHH
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNK--ADVGA-AAMDDMSAIHFASQ 80 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g--~~~~~-~~~~g~t~L~~A~~ 80 (238)
|+||||.||..|+.++++.|+...+...+..+..|.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 5799999999999999998887766666668999999999999999999999999999 55555 77899999999999
Q ss_pred cCCHHHHHHHHHCC--CCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHh
Q 041573 81 KGHLEVVRTLVSSG--VSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQ 158 (238)
Q Consensus 81 ~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~ 158 (238)
.|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-CCCCCCCCCc
Q 041573 159 SS-KKPNLNGKEK 170 (238)
Q Consensus 159 ~~-~~~~~~~~~~ 170 (238)
.+ ...+.....+
T Consensus 162 ~g~~~~~~~d~~g 174 (228)
T 2dzn_A 162 LGKSAVNWQDKQG 174 (228)
T ss_dssp TTCCCSCCCCTTS
T ss_pred cCcccccCcCCCC
Confidence 88 6665554444
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=222.47 Aligned_cols=160 Identities=26% Similarity=0.335 Sum_probs=132.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.||..|+.++++.|+ ..+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 136 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT
T ss_pred cCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 5788888888888888888444 567888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215 (285)
T ss_dssp CHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC
Confidence 8888888888888877544 478888888888888888888888888888888888888888888888888888877766
Q ss_pred CC
Q 041573 163 PN 164 (238)
Q Consensus 163 ~~ 164 (238)
.+
T Consensus 216 ~~ 217 (285)
T 3d9h_A 216 VN 217 (285)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 38
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=220.26 Aligned_cols=168 Identities=27% Similarity=0.313 Sum_probs=155.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||+|+..|+.++++ +|...+++++.++..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVK-ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence 6899999999999999999 4556799999999999999999999999999999999999998654 5999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..+..+++++|++.+.+
T Consensus 169 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 169 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD 247 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999995 88999999999999999999999999888
Q ss_pred CCCCCCCcCCc
Q 041573 163 PNLNGKEKAGE 173 (238)
Q Consensus 163 ~~~~~~~~~~~ 173 (238)
.+.....+...
T Consensus 248 ~~~~d~~g~t~ 258 (285)
T 3d9h_A 248 TQAKNAEGKRP 258 (285)
T ss_dssp TTCCCTTSCCG
T ss_pred CCCcCCCCCCH
Confidence 76665544433
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.8e-34 Score=223.05 Aligned_cols=171 Identities=23% Similarity=0.260 Sum_probs=155.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhC---CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISN---PLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFAS 79 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~---~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 79 (238)
+|+||||+|+..|+.++++.|+... +.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 6899999999999999998666432 3479999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCC------ccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCC-CCCCHHHhhcchhHHHH
Q 041573 80 QKGHLEVVRTLVSSGVS------IKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTK-AGKTPLDLARNEEIRSF 152 (238)
Q Consensus 80 ~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~g~tpl~~A~~~~~~~~ 152 (238)
..|+.+++++|+..|++ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..+..++
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~ 166 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999876 567788899999999999999999999999999999997 99999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCcCCc
Q 041573 153 LEEWEQSSKKPNLNGKEKAGE 173 (238)
Q Consensus 153 ~~~l~~~~~~~~~~~~~~~~~ 173 (238)
+++|++.+.+++.....+...
T Consensus 167 v~~Ll~~ga~~~~~~~~g~tp 187 (236)
T 1ikn_D 167 VSLLLKCGADVNRVTYQGYSP 187 (236)
T ss_dssp HHHHHTTTCCSCCCCTTCCCG
T ss_pred HHHHHHcCCCCCcccCCCCCH
Confidence 999999998877665544333
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.4e-33 Score=224.20 Aligned_cols=160 Identities=24% Similarity=0.226 Sum_probs=146.7
Q ss_pred CchHHHHHHHHc---CCHHHHHHHHHhCCCCcc-----------cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccc
Q 041573 3 NREEELHAAARS---GDLKAVQSILISNPLSVN-----------SRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAA 68 (238)
Q Consensus 3 ~~~t~L~~A~~~---g~~~~v~~ll~~~~~~~~-----------~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~ 68 (238)
+|+||||+|+.. |+.++++.|+ ..+.+++ ..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 120 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLL-QIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHH-HHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHH-hcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 689999999999 9999999665 4444443 234679999999999999999999999999999998
Q ss_pred cC-------------CchHHHHHHHcCCHHHHHHHHH---CCCCccccccCCCcHHHHHHH--CCCHH-------HHHHH
Q 041573 69 MD-------------DMSAIHFASQKGHLEVVRTLVS---SGVSIKACTRKGLNPLHYAVQ--GSHLE-------LVKYL 123 (238)
Q Consensus 69 ~~-------------g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~--~g~~~-------~~~~L 123 (238)
.. |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|
T Consensus 121 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L 200 (256)
T 2etb_A 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 200 (256)
T ss_dssp CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH
Confidence 86 9999999999999999999999 999999999999999999999 88888 99999
Q ss_pred HhcCCCc-------cccCCCCCCHHHhhcchhHHHHHHHHHhhcCCC
Q 041573 124 LRKGASL-------TAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKP 163 (238)
Q Consensus 124 l~~g~~~-------~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 163 (238)
+++|+++ +.+|..|+||||+|+..+..+++++|++++...
T Consensus 201 l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 201 LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 9999999 999999999999999999999999999887543
No 41
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.4e-32 Score=229.17 Aligned_cols=167 Identities=23% Similarity=0.291 Sum_probs=117.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCc----------------
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGA---------------- 66 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~---------------- 66 (238)
+|+||||+||..|+.++|+.|+ ..|++++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~ 97 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKT 97 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCH
Confidence 4677777777777777777444 55677777777777777777777777777777777665554
Q ss_pred ------------------------------------cccCCchHHHHHHHcC--CHHHHHHHHHCCCCccccccCCCcHH
Q 041573 67 ------------------------------------AAMDDMSAIHFASQKG--HLEVVRTLVSSGVSIKACTRKGLNPL 108 (238)
Q Consensus 67 ------------------------------------~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~L 108 (238)
.+..|.||||+|+..| +.+++++|+++|++++..|..|+|||
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 177 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPL 177 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 5556677777777777 77777777777777777777777777
Q ss_pred HHHHHCCCHHHHHHHHhcCCC-----ccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCc
Q 041573 109 HYAVQGSHLELVKYLLRKGAS-----LTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEK 170 (238)
Q Consensus 109 ~~A~~~g~~~~~~~Ll~~g~~-----~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (238)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|++.+.+++.....+
T Consensus 178 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g 244 (364)
T 3ljn_A 178 MRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEH 244 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 777777777777777777666 67777777777777777777777777777666665544433
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=6.8e-33 Score=222.32 Aligned_cols=161 Identities=25% Similarity=0.250 Sum_probs=145.6
Q ss_pred CchHHHHHHHHc---CCHHHHHHHHHhCCC-----------CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccc
Q 041573 3 NREEELHAAARS---GDLKAVQSILISNPL-----------SVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAA 68 (238)
Q Consensus 3 ~~~t~L~~A~~~---g~~~~v~~ll~~~~~-----------~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~ 68 (238)
.|+||||+|+.. |+.++++.|+.. ++ .....|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 131 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccc
Confidence 689999999987 999999966644 32 222356789999999999999999999999999999999
Q ss_pred c--------------CCchHHHHHHHcCCHHHHHHHHH---CCCCccccccCCCcHHHHHHHCCC---------HHHHHH
Q 041573 69 M--------------DDMSAIHFASQKGHLEVVRTLVS---SGVSIKACTRKGLNPLHYAVQGSH---------LELVKY 122 (238)
Q Consensus 69 ~--------------~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~---------~~~~~~ 122 (238)
. .|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++
T Consensus 132 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~ 211 (273)
T 2pnn_A 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211 (273)
T ss_dssp CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHH
Confidence 7 79999999999999999999999 999999999999999999999998 899999
Q ss_pred HHhcCCCcc-------ccCCCCCCHHHhhcchhHHHHHHHHHhhcC-CCC
Q 041573 123 LLRKGASLT-------AKTKAGKTPLDLARNEEIRSFLEEWEQSSK-KPN 164 (238)
Q Consensus 123 Ll~~g~~~~-------~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~-~~~ 164 (238)
|+++|++++ .+|..|+||||+|+..+..+++++|++.+. ++.
T Consensus 212 Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 212 ILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---
T ss_pred HHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCch
Confidence 999999996 589999999999999999999999999998 443
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.3e-32 Score=204.45 Aligned_cols=129 Identities=38% Similarity=0.559 Sum_probs=119.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||+|+..|+.++++ +|...+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 36 ~g~t~l~~a~~~~~~~~~~-~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVK-LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 6899999999999999999 555789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccc
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTA 132 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~ 132 (238)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++||+++.
T Consensus 115 ~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999864
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.6e-33 Score=221.61 Aligned_cols=161 Identities=19% Similarity=0.170 Sum_probs=147.2
Q ss_pred CchHHHHHHH---HcCCHHHHHHHHHhC----------CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccc-
Q 041573 3 NREEELHAAA---RSGDLKAVQSILISN----------PLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAA- 68 (238)
Q Consensus 3 ~~~t~L~~A~---~~g~~~~v~~ll~~~----------~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~- 68 (238)
.|+||||+|+ ..|+.++++.|+... ...++..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 124 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCE
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccc
Confidence 5999999999 779999999776431 24455566689999999999999999999999999999998
Q ss_pred -------------cCCchHHHHHHHcCCHHHHHHHHH---CCCCccccccCCCcHHHHHHHCCC---------HHHHHHH
Q 041573 69 -------------MDDMSAIHFASQKGHLEVVRTLVS---SGVSIKACTRKGLNPLHYAVQGSH---------LELVKYL 123 (238)
Q Consensus 69 -------------~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~---------~~~~~~L 123 (238)
..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 589999999999999999999999 999999999999999999998887 7999999
Q ss_pred HhcCCCc-------cccCCCCCCHHHhhcchhHHHHHHHHHhhcCCC
Q 041573 124 LRKGASL-------TAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKP 163 (238)
Q Consensus 124 l~~g~~~-------~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 163 (238)
+++|+++ +.+|..|.||||+|+..+..+++++|++++..+
T Consensus 205 l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 205 LIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999 789999999999999999999999999988654
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.2e-33 Score=223.09 Aligned_cols=160 Identities=23% Similarity=0.271 Sum_probs=145.9
Q ss_pred chHHHHHHHHcCCHHHHHH---HHHhCCCCccc----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCcCcc------
Q 041573 4 REEELHAAARSGDLKAVQS---ILISNPLSVNS----RDKHSRTPLHLAAWS---GQTEVVSYLCKNKADVGAA------ 67 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~---ll~~~~~~~~~----~~~~g~t~L~~A~~~---g~~~~~~~Ll~~g~~~~~~------ 67 (238)
|+||||.||..|+.+.|+. ++...+++++. +|..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 7899999999999985543 34467899998 899999999999999 9999999999998887643
Q ss_pred -----ccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccC-------------CCcHHHHHHHCCCHHHHHHHHh---c
Q 041573 68 -----AMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRK-------------GLNPLHYAVQGSHLELVKYLLR---K 126 (238)
Q Consensus 68 -----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~g~~~~~~~Ll~---~ 126 (238)
|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 367999999999999999999999999999999886 9999999999999999999999 9
Q ss_pred CCCccccCCCCCCHHHhhcc--hhHHH-------HHHHHHhhcCCC
Q 041573 127 GASLTAKTKAGKTPLDLARN--EEIRS-------FLEEWEQSSKKP 163 (238)
Q Consensus 127 g~~~~~~~~~g~tpl~~A~~--~~~~~-------~~~~l~~~~~~~ 163 (238)
|++++.+|..|+||||+|+. .+..+ ++++|++.+.+.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 99999999999999999997 66776 999999988776
No 46
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.9e-32 Score=217.86 Aligned_cols=157 Identities=29% Similarity=0.442 Sum_probs=141.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCcccc-------------
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAM------------- 69 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~------------- 69 (238)
+|.||||+||..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 72 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVK-FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc
Confidence 6899999999999999999 55568999999999999999999999999999999999999887654
Q ss_pred -----------------------------------------------CCchHHHHHHHcCCHHHHHHHHHCCCCcccccc
Q 041573 70 -----------------------------------------------DDMSAIHFASQKGHLEVVRTLVSSGVSIKACTR 102 (238)
Q Consensus 70 -----------------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 102 (238)
.|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 466888999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 103 KGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 103 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ...++..+.+...
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~~~ 288 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKKQN 288 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHHTT
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999764 4455555554443
No 47
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1e-31 Score=228.93 Aligned_cols=170 Identities=31% Similarity=0.456 Sum_probs=149.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|.||||.|+..|+.++++ +|...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 211 ~g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 289 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVAR-SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEG 289 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 5778888888888888888 444678888888888999999999999999999999999999988889999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+
T Consensus 290 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~ 369 (437)
T 1n11_A 290 HVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS 369 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCcCCc
Q 041573 163 PNLNGKEKAGE 173 (238)
Q Consensus 163 ~~~~~~~~~~~ 173 (238)
++.....+...
T Consensus 370 ~~~~~~~g~t~ 380 (437)
T 1n11_A 370 PNEVSSDGTTP 380 (437)
T ss_dssp SCCCCSSSCCH
T ss_pred CCCCCCCCCCH
Confidence 87666555443
No 48
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.1e-33 Score=223.60 Aligned_cols=158 Identities=16% Similarity=0.133 Sum_probs=80.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||+|+..|+.++++.| ...|++++.. +|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~L-l~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTL-LNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH-HHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHH-HhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcC
Confidence 355555555555555555532 2335555444 2555555555555555555555555555555555555555555555
Q ss_pred CHHHHHHHHHCCCCccccccCC-CcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKG-LNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..+..+++++|++.+.
T Consensus 107 ~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga 185 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMT 185 (285)
T ss_dssp CHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCC
Confidence 5555555555555555555555 45555555555444444444444433111 134444444444444444444444444
Q ss_pred CCC
Q 041573 162 KPN 164 (238)
Q Consensus 162 ~~~ 164 (238)
+++
T Consensus 186 d~n 188 (285)
T 3kea_A 186 STN 188 (285)
T ss_dssp HTC
T ss_pred CCC
Confidence 333
No 49
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=8.3e-33 Score=217.99 Aligned_cols=163 Identities=22% Similarity=0.260 Sum_probs=124.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|.||||.|+..|+.+.++ .|+..|++++.. ..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~-~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGS-ERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHH-HHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 5899999999999999998 555778888864 78899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCC-CHHHhh--cchhHHHHHHHHHhh
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGK-TPLDLA--RNEEIRSFLEEWEQS 159 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~-tpl~~A--~~~~~~~~~~~l~~~ 159 (238)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..+..+++++|+..
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998887 999999 788899999999999
Q ss_pred cCCCCCCC
Q 041573 160 SKKPNLNG 167 (238)
Q Consensus 160 ~~~~~~~~ 167 (238)
+.+.+...
T Consensus 162 ~a~~~~~~ 169 (239)
T 1ycs_B 162 QEKMGIMN 169 (239)
T ss_dssp HHHTTTTG
T ss_pred hhcccccc
Confidence 88776553
No 50
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=2.1e-32 Score=221.21 Aligned_cols=163 Identities=20% Similarity=0.158 Sum_probs=153.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCC-chHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDD-MSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A~~~ 81 (238)
+|+||||+|+..|+.++++ +|...|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVK-ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 5899999999999999999 5557799999999999999999999999999999999999999999999 7999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCH-HHhhcchhHHHHHHHHHhhc
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTP-LDLARNEEIRSFLEEWEQSS 160 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tp-l~~A~~~~~~~~~~~l~~~~ 160 (238)
|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..+..+++++|++.+
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999887433 288999999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCCCCC
Q 041573 161 KKPNLNG 167 (238)
Q Consensus 161 ~~~~~~~ 167 (238)
.+++...
T Consensus 219 ad~~~~~ 225 (285)
T 3kea_A 219 INIYSAN 225 (285)
T ss_dssp BCSTTTT
T ss_pred CCCCCCC
Confidence 8887665
No 51
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=2.8e-32 Score=227.28 Aligned_cols=161 Identities=16% Similarity=0.185 Sum_probs=145.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHh---CCCCccc-----------------CCCCCCcHHHHHHHcC--CHHHHHHHHHC
Q 041573 3 NREEELHAAARSGDLKAVQSILIS---NPLSVNS-----------------RDKHSRTPLHLAAWSG--QTEVVSYLCKN 60 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~---~~~~~~~-----------------~~~~g~t~L~~A~~~g--~~~~~~~Ll~~ 60 (238)
+|+||||+|+..|+.++++.|+.. .+.+++. .+..|.||||+|+..| +.+++++|+++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 466777777777777777755432 1555554 7889999999999999 99999999999
Q ss_pred CCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCC-----ccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCC
Q 041573 61 KADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVS-----IKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTK 135 (238)
Q Consensus 61 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 135 (238)
|++++..+..|.||||+|+..|+.+++++|+++|++ ++..+..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcchhHHHHHHHHHhhcCCC
Q 041573 136 AGKTPLDLARNEEIRSFLEEWEQSSKKP 163 (238)
Q Consensus 136 ~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 163 (238)
.|.||||+|+..+..+++++|++.+...
T Consensus 243 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 243 EHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999999999987654
No 52
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=1.8e-31 Score=227.36 Aligned_cols=167 Identities=37% Similarity=0.471 Sum_probs=146.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.||..|+.++|++|+ ..+++++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 6889999999999999999555 568899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+++++..+..|.||||+|+..+..+++++|++.+..
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 171 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 171 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999998888888888888888888888888888888888877
Q ss_pred CCCCCCCc
Q 041573 163 PNLNGKEK 170 (238)
Q Consensus 163 ~~~~~~~~ 170 (238)
++.....+
T Consensus 172 ~~~~~~~g 179 (437)
T 1n11_A 172 PNAAGKNG 179 (437)
T ss_dssp TTCCCSSC
T ss_pred CCCCCCCC
Confidence 66554443
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=6.2e-31 Score=210.96 Aligned_cols=164 Identities=27% Similarity=0.294 Sum_probs=152.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccC----------CCCCCcHHHHHHHcCCHHHHHHHHHC-CCCcCccccCC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSR----------DKHSRTPLHLAAWSGQTEVVSYLCKN-KADVGAAAMDD 71 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~----------~~~g~t~L~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g 71 (238)
.|+||||.|+..|+.++++ +|...+.+++.. +..|.||||+|+..|+.+++++|++. |++++..+..|
T Consensus 104 ~g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 182 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALK-FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHH-HHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTS
T ss_pred ccCCHHHHHHHhCCHHHHH-HHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCC
Confidence 5789999999999999998 455678888877 77899999999999999999999998 99999999999
Q ss_pred chHHHHHHHcCC----HHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHh-cCCCccccCCCCCCHHHhhcc
Q 041573 72 MSAIHFASQKGH----LEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLR-KGASLTAKTKAGKTPLDLARN 146 (238)
Q Consensus 72 ~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g~tpl~~A~~ 146 (238)
.||||+|+..++ .+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+.
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~ 262 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 262 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred hhHHHHHHHHHhhcCCCCCCC
Q 041573 147 EEIRSFLEEWEQSSKKPNLNG 167 (238)
Q Consensus 147 ~~~~~~~~~l~~~~~~~~~~~ 167 (238)
.+..+++++|++.+.+++...
T Consensus 263 ~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 263 LKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp TTCHHHHHHHHHHSSCSCCSS
T ss_pred cCcHHHHHHHHHcCCCCCccc
Confidence 999999999999998886543
No 54
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=7e-31 Score=210.63 Aligned_cols=165 Identities=21% Similarity=0.310 Sum_probs=136.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSR-DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 81 (238)
+|+|+||.|+..|+.++++.|+ ..+.+++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 4778888888888888888554 567777777 67788888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCcccc----------CCCCCCHHHhhcchhHHH
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAK----------TKAGKTPLDLARNEEIRS 151 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~----------~~~g~tpl~~A~~~~~~~ 151 (238)
|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..+..+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 8888888888888888888888888888888888888888888888888777 677888888888888888
Q ss_pred HHHHHHhh-cCCCCCCCC
Q 041573 152 FLEEWEQS-SKKPNLNGK 168 (238)
Q Consensus 152 ~~~~l~~~-~~~~~~~~~ 168 (238)
+++.|+.. +...+....
T Consensus 163 ~v~~Ll~~~~~~~~~~~~ 180 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDN 180 (285)
T ss_dssp HHHHHHHTSCCCTTCCCT
T ss_pred HHHHHHHhcCCCCCccCC
Confidence 88888876 655554443
No 55
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=4e-33 Score=211.73 Aligned_cols=159 Identities=18% Similarity=0.177 Sum_probs=141.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCC-CCCCcHHHHHHHcCCH----HHHHHHHHCCCCcCccccCCchHHHHH
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRD-KHSRTPLHLAAWSGQT----EVVSYLCKNKADVGAAAMDDMSAIHFA 78 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~----~~~~~Ll~~g~~~~~~~~~g~t~L~~A 78 (238)
++++|+.||..|+++.++.++... ++..+ ..|+||||+|+..|+. +++++|+++|++++.++..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 568899999999999998777543 34455 6799999999999975 599999999999999999999999999
Q ss_pred HHcCC------HHHHHHHHHCCCCccccccCCC-cHHHHHHHCCC-----HHHHHHHHh-cCCCccccCCCCCCHHHhhc
Q 041573 79 SQKGH------LEVVRTLVSSGVSIKACTRKGL-NPLHYAVQGSH-----LELVKYLLR-KGASLTAKTKAGKTPLDLAR 145 (238)
Q Consensus 79 ~~~~~------~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~g~-----~~~~~~Ll~-~g~~~~~~~~~g~tpl~~A~ 145 (238)
+..++ .+++++|+++|++++.+|..|+ ||||+|+..+. .+++++|++ +|++++.+|..|+||||+|+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 99887 6889999999999999999999 99999999553 569999999 99999999999999999999
Q ss_pred chhHHHHHHHHHhhcCCCCC
Q 041573 146 NEEIRSFLEEWEQSSKKPNL 165 (238)
Q Consensus 146 ~~~~~~~~~~l~~~~~~~~~ 165 (238)
..+...++++|..+..+.+.
T Consensus 163 ~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 163 RCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp TTTCHHHHHHHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHHHHHHhc
Confidence 99999999999877755443
No 56
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=2.3e-31 Score=222.80 Aligned_cols=167 Identities=22% Similarity=0.295 Sum_probs=154.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCcCccccCCchHHHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNK---ADVGAAAMDDMSAIHFAS 79 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~ 79 (238)
.|+||||+|+..|+.++|+ +|...|++++.++..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~-~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVA-YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHH-HHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 6899999999999999999 555779999999999999999999999999999999998 899999999999999999
Q ss_pred HcC---CHHHHHHHHHCCCCccc--------cccCCCcHHHHHHHCCCHHHHHHHHhcC-CCccccCCCCCCHHHhhcch
Q 041573 80 QKG---HLEVVRTLVSSGVSIKA--------CTRKGLNPLHYAVQGSHLELVKYLLRKG-ASLTAKTKAGKTPLDLARNE 147 (238)
Q Consensus 80 ~~~---~~~~v~~Ll~~g~~~~~--------~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~g~tpl~~A~~~ 147 (238)
..+ +.+++++|+++|++++. .+..|+||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 998 89999999999999986 5678999999999999999999999886 99999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCc
Q 041573 148 EIRSFLEEWEQSSKKPNLNGKEK 170 (238)
Q Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~~ 170 (238)
+..+++++|++.+.+.+.....+
T Consensus 324 g~~~iv~~Ll~~gad~~~~d~~g 346 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEAVDATD 346 (373)
T ss_dssp TCHHHHHHHHHTTCCSSCCCSSS
T ss_pred CCHHHHHHHHHcCCCccCCCCCC
Confidence 99999999999988876655443
No 57
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=5.6e-31 Score=217.23 Aligned_cols=160 Identities=22% Similarity=0.259 Sum_probs=146.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCC----HHHHHHHHHCCCCcCccccCCchHHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQ----TEVVSYLCKNKADVGAAAMDDMSAIHFA 78 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~----~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 78 (238)
.|.||||+|+..|+.++|+.||.+.|++++.++..|.|+|++++..+. ..++++|+++|++++.++..|+||||+|
T Consensus 167 ~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 167 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 246 (337)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 578999999999999999988878899999999999999999887654 4688999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHC-CCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHH
Q 041573 79 SQKGHLEVVRTLVSS-GVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWE 157 (238)
Q Consensus 79 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~ 157 (238)
+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.++|++|+++|++++.+ +||++|+..+..+++++|+
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHH
T ss_pred HHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHH
Confidence 999999999999985 8999999999999999999999999999999999998754 5999999999999999999
Q ss_pred hhcCCCCCCC
Q 041573 158 QSSKKPNLNG 167 (238)
Q Consensus 158 ~~~~~~~~~~ 167 (238)
+.++++++..
T Consensus 322 ~~GA~~d~~~ 331 (337)
T 4g8k_A 322 SHGAKEDFHP 331 (337)
T ss_dssp HTTCCC----
T ss_pred HCcCCCCCCC
Confidence 9999987643
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=6.3e-32 Score=216.66 Aligned_cols=163 Identities=21% Similarity=0.291 Sum_probs=145.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHH---hCCCCcc----cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCc-------C
Q 041573 3 NREEELHAAARSGDLKAVQSILI---SNPLSVN----SRDKHSRTPLHLAAWS---GQTEVVSYLCKNKADV-------G 65 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~---~~~~~~~----~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~g~~~-------~ 65 (238)
.|+|+||.||..|+.++|+.||. ..+.+++ ..+..|.||||+|+.. |+.+++++|++.|+++ +
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 68999999999999999987775 4666665 4578999999999987 9999999999998653 2
Q ss_pred c----cccCCchHHHHHHHcCCHHHHHHHHHCCCCcccccc--------------CCCcHHHHHHHCCCHHHHHHHHh--
Q 041573 66 A----AAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTR--------------KGLNPLHYAVQGSHLELVKYLLR-- 125 (238)
Q Consensus 66 ~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------------~g~t~L~~A~~~g~~~~~~~Ll~-- 125 (238)
. .+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2 566899999999999999999999999999999997 79999999999999999999999
Q ss_pred -cCCCccccCCCCCCHHHhhcchhH---------HHHHHHHHhhcCCCCC
Q 041573 126 -KGASLTAKTKAGKTPLDLARNEEI---------RSFLEEWEQSSKKPNL 165 (238)
Q Consensus 126 -~g~~~~~~~~~g~tpl~~A~~~~~---------~~~~~~l~~~~~~~~~ 165 (238)
+|++++.+|..|+||||+|+..+. .+++++|+..+.+.+.
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 999999999999999999997665 7889999998877653
No 59
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=1.5e-31 Score=192.77 Aligned_cols=133 Identities=24% Similarity=0.245 Sum_probs=126.6
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccC-CCc
Q 041573 28 PLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRK-GLN 106 (238)
Q Consensus 28 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t 106 (238)
+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+. |+.+++++|+++|++++.++.. |+|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 56788999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 107 PLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 107 ~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999998775
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.7e-30 Score=214.46 Aligned_cols=132 Identities=31% Similarity=0.431 Sum_probs=124.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.+.++||.||..|+.+.|+.+|...+.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 36799999999999999999998889999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKT 134 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~ 134 (238)
+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 9999999999999999999999999999999999999998888877765443
No 61
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=6.5e-32 Score=199.24 Aligned_cols=141 Identities=19% Similarity=0.286 Sum_probs=117.1
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCch-HHHHHHH
Q 041573 2 GNREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMS-AIHFASQ 80 (238)
Q Consensus 2 ~~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~ 80 (238)
..|.|+||.|+..|+.++++.|+ ..+++++.++..|.||||+|+ .|+.+++++|+++|++++.++..|.| |||+|+.
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 46899999999999999999555 668999999999999999986 89999999999999999999999999 9999999
Q ss_pred cCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhh
Q 041573 81 KGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLA 144 (238)
Q Consensus 81 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A 144 (238)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||.+-+
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999998744
No 62
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=7.9e-31 Score=205.41 Aligned_cols=166 Identities=24% Similarity=0.301 Sum_probs=115.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSR-DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 81 (238)
.|.||||.|+..|+.++++.|+ ..+.+++.. +..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 119 (240)
T 3eu9_A 41 ENVTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF 119 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 4667777777777777777444 444444433 34477777777777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCC-HHHHHHHHhcCCCccccCC-CCCCHHHhhcchhHHHHHHHHHhh
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSH-LELVKYLLRKGASLTAKTK-AGKTPLDLARNEEIRSFLEEWEQS 159 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~~~~Ll~~g~~~~~~~~-~g~tpl~~A~~~~~~~~~~~l~~~ 159 (238)
|+.+++++|+++|++++..+..|.||||+|+..+. .+++++|++.|++++..+. .|.||||+|+..+..+++++|++.
T Consensus 120 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (240)
T 3eu9_A 120 GHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 77777777777777777777777777777775444 6677777777777777665 677777777777777777777777
Q ss_pred cCCCCCCCCC
Q 041573 160 SKKPNLNGKE 169 (238)
Q Consensus 160 ~~~~~~~~~~ 169 (238)
+.+++.....
T Consensus 200 g~~~~~~~~~ 209 (240)
T 3eu9_A 200 GANVDAQNIK 209 (240)
T ss_dssp TCCTTCBCTT
T ss_pred CCCCCCcCCC
Confidence 6665544443
No 63
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=5e-31 Score=220.76 Aligned_cols=159 Identities=23% Similarity=0.362 Sum_probs=147.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCC---CCcccCCCCCCcHHHHHHHcC---CHHHHHHHHHCCCCcCc--------cc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNP---LSVNSRDKHSRTPLHLAAWSG---QTEVVSYLCKNKADVGA--------AA 68 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~---~~~~~~~~~g~t~L~~A~~~g---~~~~~~~Ll~~g~~~~~--------~~ 68 (238)
.|.||||+|+..|+.++++.|+ ..+ .+++..+..|.||||+|+..+ +.+++++|+++|++++. .+
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 198 SERSALHQAAANRDFGMMVYML-NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHT-TSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred CCCCHHHHHHHCCCHHHHHHHH-hcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 6889999999999999999555 445 789999999999999999998 89999999999999986 56
Q ss_pred cCCchHHHHHHHcCCHHHHHHHHHCC-CCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcch
Q 041573 69 MDDMSAIHFASQKGHLEVVRTLVSSG-VSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNE 147 (238)
Q Consensus 69 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~ 147 (238)
..|.||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 78999999999999999999999876 99999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCC
Q 041573 148 EIRSFLEEWEQSSKK 162 (238)
Q Consensus 148 ~~~~~~~~l~~~~~~ 162 (238)
+..+++++|++.+.+
T Consensus 357 g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 357 NHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCHHHHHHHHTTC--
T ss_pred CCHHHHHHHHhcCcc
Confidence 999999999987754
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.3e-31 Score=220.67 Aligned_cols=165 Identities=19% Similarity=0.113 Sum_probs=108.9
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCC---
Q 041573 8 LHAAARSGDLKAVQSILISNPLSVNS-RDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGH--- 83 (238)
Q Consensus 8 L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--- 83 (238)
+|.|+..+..++++ +|...|+++|. +|..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~-~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 101 QHVSFDSLLQEVND-AFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ---CHHHHHHHHHH-HCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hHHHHHhhHHHHHH-HHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 35555555555554 55566666666 66666777777777777777777777777766666666677777766666
Q ss_pred HHHHHHHHHCC-CCccccccCCCcHHHHHHH----CCCHHHHHHHHhcCC------------------------------
Q 041573 84 LEVVRTLVSSG-VSIKACTRKGLNPLHYAVQ----GSHLELVKYLLRKGA------------------------------ 128 (238)
Q Consensus 84 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~----~g~~~~~~~Ll~~g~------------------------------ 128 (238)
.++++.|++.+ ++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 180 ~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~ 259 (327)
T 1sw6_A 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 259 (327)
T ss_dssp TTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred HHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCC
Confidence 45555555554 5566666666777777666 666666666665532
Q ss_pred ---------------CccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCcCCc
Q 041573 129 ---------------SLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEKAGE 173 (238)
Q Consensus 129 ---------------~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (238)
+++.+|..|+||||+|+..+..+++++|++.+.+++.....+..+
T Consensus 260 t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 260 DSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 319 (327)
T ss_dssp CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred ChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 467778888888888888888888888888887776665554433
No 65
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.97 E-value=1e-30 Score=188.52 Aligned_cols=133 Identities=29% Similarity=0.409 Sum_probs=122.2
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcH
Q 041573 28 PLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNP 107 (238)
Q Consensus 28 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 107 (238)
|+++ .+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4566 678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 108 LHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 108 L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..++++++.+...
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999988765543
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.4e-31 Score=211.70 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=143.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHH---hCCCCcccCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCC---------
Q 041573 3 NREEELHAAARSGDLKAVQSILI---SNPLSVNSRD----KHSRTPLHLAA---WSGQTEVVSYLCKNKAD--------- 63 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~---~~~~~~~~~~----~~g~t~L~~A~---~~g~~~~~~~Ll~~g~~--------- 63 (238)
-++++||.||..|+.+.|+.|+. ..+.+++..+ ..|.||||+|+ ..|+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 37899999999999997665554 5788888665 77999999999 67999999999998744
Q ss_pred --cCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccc--------------cCCCcHHHHHHHCCCHHHHHHHHh--
Q 041573 64 --VGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACT--------------RKGLNPLHYAVQGSHLELVKYLLR-- 125 (238)
Q Consensus 64 --~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~L~~A~~~g~~~~~~~Ll~-- 125 (238)
++..|..|+||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44555689999999999999999999999999999998 589999999999999999999999
Q ss_pred -cCCCccccCCCCCCHHHhhcchhH---------HHHHHHHHhhcCCCC
Q 041573 126 -KGASLTAKTKAGKTPLDLARNEEI---------RSFLEEWEQSSKKPN 164 (238)
Q Consensus 126 -~g~~~~~~~~~g~tpl~~A~~~~~---------~~~~~~l~~~~~~~~ 164 (238)
+|++++.+|..|+||||+|+..+. .+++++|+..+.+.+
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999995444 688999999987763
No 67
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=7.7e-30 Score=199.79 Aligned_cols=165 Identities=24% Similarity=0.295 Sum_probs=141.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCcccc-CCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAM-DDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 81 (238)
.|.++|+.|+..|+.++++.|+ ..+++++..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred ccchHHHHHHHcCChHHHHHHH-HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 4678899999999999998544 57788888888999999999999999999999999988876554 488999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhH-HHHHHHHHhhc
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEI-RSFLEEWEQSS 160 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~-~~~~~~l~~~~ 160 (238)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+. ..++++|...+
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999985554 77888888888
Q ss_pred CCCCCCCC
Q 041573 161 KKPNLNGK 168 (238)
Q Consensus 161 ~~~~~~~~ 168 (238)
...+....
T Consensus 167 ~~~~~~~~ 174 (240)
T 3eu9_A 167 VSVNLGDK 174 (240)
T ss_dssp CCTTCCCT
T ss_pred CCcchhhc
Confidence 77766554
No 68
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3e-30 Score=193.02 Aligned_cols=137 Identities=18% Similarity=0.244 Sum_probs=125.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||+|+..|+.++++.|+ ..+++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 35 RGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 6899999999999999999555 678999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCH
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTP 140 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tp 140 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++...+..|.||
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999887
No 69
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=1.8e-30 Score=187.15 Aligned_cols=126 Identities=22% Similarity=0.396 Sum_probs=120.9
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccC-CchHHHHHHH
Q 041573 2 GNREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMD-DMSAIHFASQ 80 (238)
Q Consensus 2 ~~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 80 (238)
..|.||||.|+..|+.++++.|+ ..+++++.++..|.||||+|+. |+.+++++|+++|++++.++.. |.||||+|+.
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHH
Confidence 36899999999999999999555 6689999999999999999999 9999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCC
Q 041573 81 KGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGAS 129 (238)
Q Consensus 81 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~ 129 (238)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999985
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=7.1e-32 Score=211.44 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=71.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
++.|+||.|+..|+.++++.|+ ..+++++.+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAV-KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhHHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3445555555555555555333 334455555555555555555555555555555555555555555555555555555
Q ss_pred CHHHHHHHHHCCCCccccc-cCCCcHHHHH--HHCCCHHHHHHHHhcCCCccccCCCCCCHHH
Q 041573 83 HLEVVRTLVSSGVSIKACT-RKGLNPLHYA--VQGSHLELVKYLLRKGASLTAKTKAGKTPLD 142 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A--~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~ 142 (238)
+.+++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||++
T Consensus 99 ~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 99 DTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp CHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred CHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 5555555555555555543 3555555555 5555555555555554444444444444444
No 71
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=3.3e-29 Score=180.52 Aligned_cols=123 Identities=30% Similarity=0.437 Sum_probs=72.5
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCC
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGH 83 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 83 (238)
+.|+||.||..|+.++++.| ...+.+++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 14 ~~t~l~~A~~~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRIL-MANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHhCCHHHHHHH-HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 45566666666666666533 33455555555556666666666666666666666666666555566666666666666
Q ss_pred HHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcC
Q 041573 84 LEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKG 127 (238)
Q Consensus 84 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g 127 (238)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 66666666666666655556666666666666666666665544
No 72
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=3.6e-29 Score=177.14 Aligned_cols=126 Identities=44% Similarity=0.684 Sum_probs=106.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.|+..|+.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 5788888888888888888555 457788888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGAS 129 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~ 129 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 88888888888888888888888888888888888888888888875
No 73
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=8.6e-29 Score=204.14 Aligned_cols=163 Identities=23% Similarity=0.309 Sum_probs=108.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccC-----------
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDK-HSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMD----------- 70 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~----------- 70 (238)
.|.|+||.||..|++++|+.|| ..|+++|.++. .|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL-~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 3689999999999999999555 67999998875 5999999999999999999999999887665544
Q ss_pred ----------------------CchHHHHHHHcCCHHHHHHHHHCCCCcccc----------ccCCCcHHHHHHHCCCHH
Q 041573 71 ----------------------DMSAIHFASQKGHLEVVRTLVSSGVSIKAC----------TRKGLNPLHYAVQGSHLE 118 (238)
Q Consensus 71 ----------------------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------~~~g~t~L~~A~~~g~~~ 118 (238)
|.||||+|+..|+.+++++|+.+|++++.. +..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 555555555555555555555555555432 223455555555555555
Q ss_pred HHHHHHh-cCCCccccCCCCCCHHHhhc----chhHHHHHHHHHhhcCCCCCC
Q 041573 119 LVKYLLR-KGASLTAKTKAGKTPLDLAR----NEEIRSFLEEWEQSSKKPNLN 166 (238)
Q Consensus 119 ~~~~Ll~-~g~~~~~~~~~g~tpl~~A~----~~~~~~~~~~l~~~~~~~~~~ 166 (238)
++++|+. .|++++.+|..|.||++.++ ......++++|++.+.+++..
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~ 235 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR 235 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCc
Confidence 5555553 35555555555555555443 122334455555555554443
No 74
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.4e-30 Score=208.12 Aligned_cols=167 Identities=20% Similarity=0.203 Sum_probs=150.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHh-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CcCccccCCchHHHHHH--
Q 041573 4 REEELHAAARSGDLKAVQSILIS-NPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKA-DVGAAAMDDMSAIHFAS-- 79 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~-- 79 (238)
+++++|.|+..|+.+.++.++.. ....+|.+|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 35678899999999999866532 122388899999999999999999999999999998 99999999999999999
Q ss_pred ---HcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHH
Q 041573 80 ---QKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEW 156 (238)
Q Consensus 80 ---~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l 156 (238)
..++.+++++|+..|.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+++++|
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~L 235 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLL 235 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hcCCCCCCCCCc
Q 041573 157 EQ-SSKKPNLNGKEK 170 (238)
Q Consensus 157 ~~-~~~~~~~~~~~~ 170 (238)
+. .+.+.+.....+
T Consensus 236 l~~~gad~~~~d~~g 250 (276)
T 4hbd_A 236 LAVPSCDISLTDRDG 250 (276)
T ss_dssp HTSTTCCTTCCCTTS
T ss_pred HhcCCCCCcCcCCCC
Confidence 98 777776655443
No 75
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.1e-29 Score=191.80 Aligned_cols=140 Identities=21% Similarity=0.318 Sum_probs=133.2
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHH
Q 041573 30 SVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLH 109 (238)
Q Consensus 30 ~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 109 (238)
.+|.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCC
Q 041573 110 YAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKE 169 (238)
Q Consensus 110 ~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~ 169 (238)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+++.....
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 166 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLT 166 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999998877655433
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=6.2e-30 Score=210.54 Aligned_cols=145 Identities=18% Similarity=0.138 Sum_probs=133.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCC---HHHHHHHHHCC-CCcCccccCCchHHHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQ---TEVVSYLCKNK-ADVGAAAMDDMSAIHFA 78 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~---~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A 78 (238)
+|+||||+||..|+.++|+ +|+..|++++.+|..|+||||+|+..|+ .++++.|++.+ ++++.++..|+||||+|
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~-~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 208 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVK-HLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 208 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHH
Confidence 6899999999999999999 5557799999999999999999999998 78888888886 78999999999999999
Q ss_pred HH----cCCHHHHHHHHHCCC---------------------------------------------CccccccCCCcHHH
Q 041573 79 SQ----KGHLEVVRTLVSSGV---------------------------------------------SIKACTRKGLNPLH 109 (238)
Q Consensus 79 ~~----~~~~~~v~~Ll~~g~---------------------------------------------~~~~~~~~g~t~L~ 109 (238)
+. .|+.+++++|++.+. +++.+|..|+||||
T Consensus 209 ~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh 288 (327)
T 1sw6_A 209 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLN 288 (327)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHH
T ss_pred HHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 99 899999999998743 57888899999999
Q ss_pred HHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchh
Q 041573 110 YAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEE 148 (238)
Q Consensus 110 ~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 148 (238)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 289 ~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 289 IAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 999999999999999999999999999999999998754
No 77
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=2.5e-29 Score=181.11 Aligned_cols=126 Identities=32% Similarity=0.456 Sum_probs=120.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHC
Q 041573 35 DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQG 114 (238)
Q Consensus 35 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 114 (238)
...+.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhc
Q 041573 115 SHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSS 160 (238)
Q Consensus 115 g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 160 (238)
|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999998754
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=7.3e-30 Score=188.22 Aligned_cols=138 Identities=23% Similarity=0.239 Sum_probs=121.5
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCc-HHHH
Q 041573 32 NSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLN-PLHY 110 (238)
Q Consensus 32 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~ 110 (238)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++.++..|+| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 345678999999999999999999999999999999999999999986 89999999999999999999999999 9999
Q ss_pred HHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCc
Q 041573 111 AVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEK 170 (238)
Q Consensus 111 A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (238)
|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+++.....+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 144 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHAR 144 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCc
Confidence 999999999999999999999999999999999999999999999999988876655443
No 79
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.1e-28 Score=174.57 Aligned_cols=125 Identities=41% Similarity=0.632 Sum_probs=122.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCC
Q 041573 37 HSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSH 116 (238)
Q Consensus 37 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 116 (238)
+|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 117 LELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 117 ~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
.+++++|+++|++++.+|..|.|||++|+..+..+++++|++.+.
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999998875
No 80
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=6.4e-29 Score=175.89 Aligned_cols=120 Identities=28% Similarity=0.394 Sum_probs=112.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHC
Q 041573 35 DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQG 114 (238)
Q Consensus 35 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 114 (238)
+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHH
Q 041573 115 SHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLE 154 (238)
Q Consensus 115 g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~ 154 (238)
|+.+++++|+++|++++.+|..|.||||+|...+..++++
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll~ 123 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHhC
Confidence 9999999999999999999999999999998888877653
No 81
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.4e-28 Score=180.70 Aligned_cols=125 Identities=23% Similarity=0.275 Sum_probs=118.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||.|+. |+.++++. |...+++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 37 ~g~t~L~~A~~-~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 37 FGRTALQVMKL-GNPEIARR-LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 114 (162)
T ss_dssp TSCCHHHHCCS-SCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCccHHHHHHc-CcHHHHHH-HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 68999999999 99999994 55679999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCC-ccccccCCCcHHHHHHHCCCHHHHHHHHhcCCC
Q 041573 83 HLEVVRTLVSSGVS-IKACTRKGLNPLHYAVQGSHLELVKYLLRKGAS 129 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~ 129 (238)
+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 115 ~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 115 HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999998 599999999999999999999999999999985
No 82
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.5e-28 Score=185.00 Aligned_cols=134 Identities=28% Similarity=0.358 Sum_probs=127.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||.|+..|+.++++ +|...+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 38 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 38 HGFSPLHWACREGRSAVVE-MLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG 116 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 6889999999999999999 555779999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAG 137 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 137 (238)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++..+..+
T Consensus 117 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 117 QDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp CHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred CHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 9999999999999999999999999999999999999999999999998876554
No 83
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=3.8e-29 Score=197.02 Aligned_cols=146 Identities=21% Similarity=0.233 Sum_probs=133.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|.|+||.|+..|+.++++ +|...+.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 36 ~~~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQ-RIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHH-HHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhhHHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4689999999999999999 555778899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCC-cHHHHH--HHCCCHHHHHHHHhcCCCcccc---------CCCCCCHHHhhcchhH
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGL-NPLHYA--VQGSHLELVKYLLRKGASLTAK---------TKAGKTPLDLARNEEI 149 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A--~~~g~~~~~~~Ll~~g~~~~~~---------~~~g~tpl~~A~~~~~ 149 (238)
+.+++++|+++|++++..+..|. ||||+| +..|+.+++++|+.+|++++.. +..+.+|++++...+.
T Consensus 115 ~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 115 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred CHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999999999999999998877 999999 7889999999999999988776 5668888888866553
No 84
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.9e-28 Score=180.62 Aligned_cols=133 Identities=17% Similarity=0.234 Sum_probs=127.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCC
Q 041573 37 HSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSH 116 (238)
Q Consensus 37 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 116 (238)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCC
Q 041573 117 LELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKE 169 (238)
Q Consensus 117 ~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~ 169 (238)
.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.+++.....
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 134 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDS 134 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999988877665443
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=192.68 Aligned_cols=145 Identities=21% Similarity=0.253 Sum_probs=129.5
Q ss_pred HHhCCCCcccC---CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCcccc
Q 041573 24 LISNPLSVNSR---DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKAC 100 (238)
Q Consensus 24 l~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 100 (238)
|+..+.+++.. +..+.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 4 ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~ 83 (229)
T 2vge_A 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSP 83 (229)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred hhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 33455565544 456678899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccC-CCCCCHHHhh--cchhHHHHHHHHHhhcCCCCCCCC
Q 041573 101 TRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKT-KAGKTPLDLA--RNEEIRSFLEEWEQSSKKPNLNGK 168 (238)
Q Consensus 101 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~-~~g~tpl~~A--~~~~~~~~~~~l~~~~~~~~~~~~ 168 (238)
|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..+..+++++|++.+.+.+....
T Consensus 84 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 84 DSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 9999999999999999999999999999999997 6999999999 999999999999999988766543
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.96 E-value=3.1e-28 Score=184.14 Aligned_cols=138 Identities=25% Similarity=0.331 Sum_probs=126.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccc-cCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAA-MDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~ 81 (238)
.|+||||.|+..|+.++++.|+. +.+++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 57899999999999999996665 88999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhh
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQS 159 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~ 159 (238)
|+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+||++|+..+..++++.|...
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999999999999875322 4578999999999999999998754
No 87
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.3e-27 Score=178.41 Aligned_cols=124 Identities=33% Similarity=0.483 Sum_probs=118.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|.||||.|+..|+.++++.| ...+++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHLEIVEVL-LKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG 124 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHH-HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 689999999999999999955 4679999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKG 127 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g 127 (238)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 125 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999876
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.95 E-value=7.8e-28 Score=190.13 Aligned_cols=140 Identities=26% Similarity=0.331 Sum_probs=129.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccc-cCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAA-MDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~ 81 (238)
.|.||||.|+..|+.++++.||. +.++|.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 57899999999999999996665 89999999999999999999999999999999999999998 7899999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+.+++++|+++|++++.+|..|+||||+|+..+ ....+.|||++|+..+..+++++|.....
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 9999999999999999999999999999998632 23568999999999999999999988643
No 89
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=1.1e-28 Score=192.06 Aligned_cols=136 Identities=24% Similarity=0.320 Sum_probs=117.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCcHHHHHHH
Q 041573 35 DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSS-GVSIKACTRKGLNPLHYAVQ 113 (238)
Q Consensus 35 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 113 (238)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCCCCCc
Q 041573 114 GSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLNGKEK 170 (238)
Q Consensus 114 ~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (238)
.|+.+++++|+++|++++.+|..|.|||++|+..++.++++.++..+..........
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 999999999999999999999999999999999999999999998888776555433
No 90
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.3e-27 Score=175.42 Aligned_cols=120 Identities=31% Similarity=0.483 Sum_probs=115.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|.||||.|+..|+.++++ +|...+++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 33 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 33 LGTSPLHLAAQYGHFSTTE-VLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHH-HHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 5889999999999999999 455789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHH
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYL 123 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~L 123 (238)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 112 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999987
No 91
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=4.6e-28 Score=179.88 Aligned_cols=124 Identities=27% Similarity=0.377 Sum_probs=116.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||+|+..|+.++++ +|...+++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 41 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 119 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVE-YLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG 119 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcChHHHHH-HHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence 5789999999999999999 555779999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGA 128 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~ 128 (238)
+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++|+
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999999877 99999999999886
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=197.70 Aligned_cols=140 Identities=21% Similarity=0.246 Sum_probs=118.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCccc------CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCcCccccCCchH
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNS------RDKHSRTPLHLAAWS---GQTEVVSYLCKNKADVGAAAMDDMSA 74 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~~~~Ll~~g~~~~~~~~~g~t~ 74 (238)
..++|+.|+..|+.+.++.|+ ..+.+++. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 457799999999999998655 77888887 688899999999987 88999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHH
Q 041573 75 IHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIR 150 (238)
Q Consensus 75 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~ 150 (238)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..+..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999998876 578999999876653
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=4.4e-28 Score=188.64 Aligned_cols=135 Identities=23% Similarity=0.279 Sum_probs=113.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKN-KADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 81 (238)
+|.|+||.||..|+.++++.|+ ..+++++.+|..|.||||+||..|+.+++++|++. |++++.+|..|.||||+|+..
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred ccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 5789999999999999999555 68899999999999999999999999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCC
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGK 138 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~ 138 (238)
|+.+++++|+++|++++.+|..|.||||+|+..|..++++.|+..|+.....+..|.
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999999999999999999999999999999988776654
No 94
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=8.6e-27 Score=171.34 Aligned_cols=121 Identities=26% Similarity=0.352 Sum_probs=116.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|+||||. +..|+.++++.| ...|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 35 ~g~t~L~~-~~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 35 FGKTALQV-MMFGSTAIALEL-LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112 (156)
T ss_dssp TSCCHHHH-SCTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred CCCcHHHH-HHcCCHHHHHHH-HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC
Confidence 68999999 999999999954 4779999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhc
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRK 126 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~ 126 (238)
+.+++++|++. ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 113 ~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 113 HTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred hHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999 99999999999999999999999999999874
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=4.3e-28 Score=183.94 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=118.5
Q ss_pred CchHHHHHHHHcCCH----HHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCC------HHHHHHHHHCCCCcCccccCCc
Q 041573 3 NREEELHAAARSGDL----KAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQ------TEVVSYLCKNKADVGAAAMDDM 72 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~----~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~------~~~~~~Ll~~g~~~~~~~~~g~ 72 (238)
.|+||||+|+..|+. ++++ +|+..|+++|.++..|+||||+|+..|+ .+++++|+++|++++.+|..|.
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~-~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISM-FLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHH-HHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred CCCCHHHHHHHcCCcchHHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 489999999999985 4777 6668899999999999999999999987 6889999999999999999999
Q ss_pred -hHHHHHHHcCC-----HHHHHHHHH-CCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccC
Q 041573 73 -SAIHFASQKGH-----LEVVRTLVS-SGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKT 134 (238)
Q Consensus 73 -t~L~~A~~~~~-----~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~ 134 (238)
||||+|+..+. .+++++|+. +|++++.+|..|.||||+|+..|+.+++++|..+...++.++
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 99999999543 569999999 999999999999999999999999999999998866665554
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=6e-28 Score=173.99 Aligned_cols=125 Identities=31% Similarity=0.430 Sum_probs=114.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||.|+..|+.++++.| ...+.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYL-LQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG 87 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHH-HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHH-HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcC
Confidence 689999999999999999955 4679999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCC
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGA 128 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~ 128 (238)
+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+.
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999988888888776654
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=5.3e-27 Score=165.98 Aligned_cols=110 Identities=27% Similarity=0.385 Sum_probs=104.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
.|.|+||.|+..|+.++++.|+ ..+.+++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 5789999999999999999554 678999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHHHHHHH
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPLHYAVQ 113 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 113 (238)
+.+++++|+++|++++.+|..|.||||+|..
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999999943
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.94 E-value=3.8e-26 Score=197.92 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=116.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHhCCCCcccC------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCcCccccCCchH
Q 041573 4 REEELHAAARSGDLKAVQSILISNPLSVNSR------DKHSRTPLHLAAW---SGQTEVVSYLCKNKADVGAAAMDDMSA 74 (238)
Q Consensus 4 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~~~~Ll~~g~~~~~~~~~g~t~ 74 (238)
..+.||.|+..|+.+.++.|| ..|+++|.. +..|.||||+||. .|+.+++++|+++|+++|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll-~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHH-HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHH-hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 357899999999999999554 678999877 8899999999977 899999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhc
Q 041573 75 IHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLAR 145 (238)
Q Consensus 75 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~ 145 (238)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|++.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 9999999999999999999999999999999999999999999999999999999987 4566553
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=6.6e-26 Score=188.81 Aligned_cols=142 Identities=22% Similarity=0.284 Sum_probs=98.8
Q ss_pred chHHHHHHHHc-CCHHHHHHHHHhCCCCcccCC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHH
Q 041573 4 REEELHAAARS-GDLKAVQSILISNPLSVNSRD--KHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQ 80 (238)
Q Consensus 4 ~~t~L~~A~~~-g~~~~v~~ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 80 (238)
+.++||.|+.. |+.++++.| +..|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~L-L~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADA-LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHH-HHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHH-HHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45678888888 888888744 46777888777 778888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcC---CCccccCCCCCCHHHhhcc
Q 041573 81 KGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKG---ASLTAKTKAGKTPLDLARN 146 (238)
Q Consensus 81 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g---~~~~~~~~~g~tpl~~A~~ 146 (238)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+.++ ++....+..+.|+++++..
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 88888888888888888888888888888888888888888887764 3334455667777776654
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=3.8e-26 Score=172.62 Aligned_cols=115 Identities=29% Similarity=0.354 Sum_probs=109.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccc-cCCCcHHHHHHH
Q 041573 35 DKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACT-RKGLNPLHYAVQ 113 (238)
Q Consensus 35 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~ 113 (238)
+..|.||||+|+..|+.++++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3578999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred CCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHH
Q 041573 114 GSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIR 150 (238)
Q Consensus 114 ~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~ 150 (238)
.|+.+++++|+++|++++.+|..|.||||+|+..+..
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 9999999999999999999999999999999875443
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=1.1e-25 Score=181.08 Aligned_cols=124 Identities=26% Similarity=0.287 Sum_probs=64.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCcC------ccccCCchHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCcHH
Q 041573 38 SRTPLHLAAWSGQTEVVSYLCKNKADVG------AAAMDDMSAIHFASQK---GHLEVVRTLVSSGVSIKACTRKGLNPL 108 (238)
Q Consensus 38 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~------~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L 108 (238)
..++|+.|+..|+.+.+..++..|++++ ..+..|.||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 3345555555555555555555555422 2244455555555554 455555555555555555555555555
Q ss_pred HHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcC
Q 041573 109 HYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSK 161 (238)
Q Consensus 109 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 161 (238)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 55555555555555555555555555555555555555555555555555544
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.1e-27 Score=200.11 Aligned_cols=152 Identities=17% Similarity=0.141 Sum_probs=129.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---CccccCCchHHH
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLS---VNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADV---GAAAMDDMSAIH 76 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~---~~~~~~g~t~L~ 76 (238)
+++||||.|+..|+.++|+.|+ ..+.. .+..+..|.||||+|+..|+.+++++|+++|+++ +..+.. .||||
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll-~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLC-LLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHT-TC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHH-HcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 4679999999999999999555 55542 2234456889999999999999999999999862 333333 89999
Q ss_pred HHHHcCCHHHHHHHHHCCCCccc--cccCCCcHHHHHH-HCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHH
Q 041573 77 FASQKGHLEVVRTLVSSGVSIKA--CTRKGLNPLHYAV-QGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFL 153 (238)
Q Consensus 77 ~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~-~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~ 153 (238)
+|+..|+.+++++|+++|++++. .|..|+||||+|+ ..|+.++|++|++.|+ .|.|||++|+..+..+++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHH
Confidence 99999999999999999999988 8889999999999 9999999999999875 288999999999999999
Q ss_pred HHHHhhcCCC
Q 041573 154 EEWEQSSKKP 163 (238)
Q Consensus 154 ~~l~~~~~~~ 163 (238)
++|.+.+...
T Consensus 242 ~lL~~~ga~~ 251 (376)
T 2aja_A 242 PFIARHVNRL 251 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhcCccc
Confidence 9999887543
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.8e-25 Score=148.73 Aligned_cols=93 Identities=45% Similarity=0.710 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCC
Q 041573 37 HSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSH 116 (238)
Q Consensus 37 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 116 (238)
+|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q 041573 117 LELVKYLLRKGAS 129 (238)
Q Consensus 117 ~~~~~~Ll~~g~~ 129 (238)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998874
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=1.5e-24 Score=174.49 Aligned_cols=124 Identities=19% Similarity=0.297 Sum_probs=115.5
Q ss_pred hHHHHHHHHcCCHHHHHHHHHhCCCC------cccCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCcCccccCCchHH
Q 041573 5 EEELHAAARSGDLKAVQSILISNPLS------VNSRDKHSRTPLHLAAWS---GQTEVVSYLCKNKADVGAAAMDDMSAI 75 (238)
Q Consensus 5 ~t~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~g~~~~~~~~~g~t~L 75 (238)
.++|+.|+..|+.+.++.++ ..+.+ ++..+..|.||||+|+.. |+.+++++|+++|++++.+|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll-~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAY-ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHH-HhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 46899999999999998555 55666 445578999999999999 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCC
Q 041573 76 HFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGAS 129 (238)
Q Consensus 76 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~ 129 (238)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999984
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.9e-25 Score=176.47 Aligned_cols=110 Identities=30% Similarity=0.402 Sum_probs=106.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccc-cCCCcHHHHHHHC
Q 041573 36 KHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACT-RKGLNPLHYAVQG 114 (238)
Q Consensus 36 ~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~ 114 (238)
..|.||||+|+..|+.+++++|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468999999999999999999999 99999999999999999999999999999999999999998 7899999999999
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHhhcc
Q 041573 115 SHLELVKYLLRKGASLTAKTKAGKTPLDLARN 146 (238)
Q Consensus 115 g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~ 146 (238)
|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999999999999999999999974
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=1.2e-25 Score=157.04 Aligned_cols=110 Identities=35% Similarity=0.489 Sum_probs=103.5
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHH
Q 041573 32 NSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYA 111 (238)
Q Consensus 32 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 111 (238)
..+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHhcCCCccccCCCCCCHH
Q 041573 112 VQGSHLELVKYLLRKGASLTAKTKAGKTPL 141 (238)
Q Consensus 112 ~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl 141 (238)
+..|+.+++++|+++|++++.++..|.+|-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999999999999884
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=5.4e-25 Score=190.71 Aligned_cols=129 Identities=24% Similarity=0.271 Sum_probs=119.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCcCcc------ccCCchHHHHHHH---cCCHHHHHHHHHCCCCccccccCCCcHH
Q 041573 38 SRTPLHLAAWSGQTEVVSYLCKNKADVGAA------AMDDMSAIHFASQ---KGHLEVVRTLVSSGVSIKACTRKGLNPL 108 (238)
Q Consensus 38 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 108 (238)
..+.||.|+..|+.++++.|+..|++++.. +..|.||||+|+. .|+.+++++|+++|++++.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 346799999999999999999999999988 8899999999977 8999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCCCCCC
Q 041573 109 HYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKKPNLN 166 (238)
Q Consensus 109 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~~ 166 (238)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999887654
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=5.7e-25 Score=183.16 Aligned_cols=127 Identities=21% Similarity=0.272 Sum_probs=120.9
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHCCCCcCccc--cCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHH
Q 041573 36 KHSRTPLHLAAWS-GQTEVVSYLCKNKADVGAAA--MDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAV 112 (238)
Q Consensus 36 ~~g~t~L~~A~~~-g~~~~~~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 112 (238)
..+.|+||+|+.. |+.++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 4566899999999 99999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 113 QGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 113 ~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|+..+..
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999887743
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=175.47 Aligned_cols=125 Identities=26% Similarity=0.297 Sum_probs=119.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCcCc------cccCCchHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCcHH
Q 041573 38 SRTPLHLAAWSGQTEVVSYLCKNKADVGA------AAMDDMSAIHFASQK---GHLEVVRTLVSSGVSIKACTRKGLNPL 108 (238)
Q Consensus 38 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L 108 (238)
+.++|+.|+..|+.+.++.|+..|++++. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34679999999999999999999999998 688999999999997 899999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhhcCC
Q 041573 109 HYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQSSKK 162 (238)
Q Consensus 109 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 162 (238)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|++.+..
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999988765
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=141.12 Aligned_cols=93 Identities=44% Similarity=0.679 Sum_probs=87.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+||||+|+..|+.++++ +|...+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 5899999999999999999 555789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCC
Q 041573 83 HLEVVRTLVSSGVS 96 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~ 96 (238)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999875
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=2.3e-23 Score=145.33 Aligned_cols=105 Identities=35% Similarity=0.507 Sum_probs=98.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcC
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKG 82 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 82 (238)
+|+|+||.||..|+.++++ +|...+++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVK-KLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHH-HHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence 6899999999999999999 555779999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCccccccCCCcHH
Q 041573 83 HLEVVRTLVSSGVSIKACTRKGLNPL 108 (238)
Q Consensus 83 ~~~~v~~Ll~~g~~~~~~~~~g~t~L 108 (238)
+.+++++|+++|++++.++..|.||-
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999874
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=4.7e-24 Score=178.20 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=117.7
Q ss_pred HHHHHHHH-cCCHHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---CccccCCchHHHHHHHc
Q 041573 6 EELHAAAR-SGDLKAVQSILISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADV---GAAAMDDMSAIHFASQK 81 (238)
Q Consensus 6 t~L~~A~~-~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~ 81 (238)
++++.|.. .++.+.++.++ ..+. ++.||||+|+..|+.+++++|++.|+.. +..+..|.||||+|+..
T Consensus 67 l~~~~a~~~~~~~~~~~~l~-~~g~-------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAH-KKGI-------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHH-HHTC-------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHH-HcCC-------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 45666665 35566666443 3333 4569999999999999999999999832 23455688999999999
Q ss_pred CCHHHHHHHHHCCCCc---cccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccc--cCCCCCCHHHhhc-chhHHHHHHH
Q 041573 82 GHLEVVRTLVSSGVSI---KACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTA--KTKAGKTPLDLAR-NEEIRSFLEE 155 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~--~~~~g~tpl~~A~-~~~~~~~~~~ 155 (238)
|+.++|++|+++|+++ +..+.. +||||+|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|..+++++
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 9999999999999863 333333 8999999999999999999999999987 8999999999999 9999999999
Q ss_pred HHhhc
Q 041573 156 WEQSS 160 (238)
Q Consensus 156 l~~~~ 160 (238)
|++.+
T Consensus 218 Ll~~g 222 (376)
T 2aja_A 218 LLDCP 222 (376)
T ss_dssp HTTSH
T ss_pred HHhCC
Confidence 98755
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.86 E-value=1.7e-21 Score=134.93 Aligned_cols=92 Identities=28% Similarity=0.419 Sum_probs=69.4
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHH
Q 041573 32 NSRDKHSRTPLHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYA 111 (238)
Q Consensus 32 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 111 (238)
...+.+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 34456777788888888888888888877777777777777888888877777788877777777777777777888888
Q ss_pred HHCCCHHHHHHH
Q 041573 112 VQGSHLELVKYL 123 (238)
Q Consensus 112 ~~~g~~~~~~~L 123 (238)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=7.3e-21 Score=131.74 Aligned_cols=93 Identities=31% Similarity=0.424 Sum_probs=85.7
Q ss_pred cCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHhcCCCccccCCCCCCHHHh
Q 041573 64 VGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLRKGASLTAKTKAGKTPLDL 143 (238)
Q Consensus 64 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~tpl~~ 143 (238)
+...+..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34467789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhHHHHHHHH
Q 041573 144 ARNEEIRSFLEEW 156 (238)
Q Consensus 144 A~~~~~~~~~~~l 156 (238)
|+..+..+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999998876
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=51.21 E-value=19 Score=30.65 Aligned_cols=118 Identities=10% Similarity=0.103 Sum_probs=56.9
Q ss_pred HHHHHHcCCHHHHHHHH---HhCCCCcccCCCCCCcHHHHHHHcC-C-------------HHHHHHHHHCCCCcCccccC
Q 041573 8 LHAAARSGDLKAVQSIL---ISNPLSVNSRDKHSRTPLHLAAWSG-Q-------------TEVVSYLCKNKADVGAAAMD 70 (238)
Q Consensus 8 L~~A~~~g~~~~v~~ll---~~~~~~~~~~~~~g~t~L~~A~~~g-~-------------~~~~~~Ll~~g~~~~~~~~~ 70 (238)
|..+++.|+.+....++ ...|+.++.. -.+.|..+|..+ . .++++.+...|..++....
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty- 108 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF- 108 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH-
Confidence 44555677766554444 2345444322 123344444321 1 2455556666766654432
Q ss_pred CchHHHHHHHcCCHHHH----HHHHHCCCCccccccCCCcHHHHHHHCCCHHHH----HHHHhcCCCccc
Q 041573 71 DMSAIHFASQKGHLEVV----RTLVSSGVSIKACTRKGLNPLHYAVQGSHLELV----KYLLRKGASLTA 132 (238)
Q Consensus 71 g~t~L~~A~~~~~~~~v----~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~----~~Ll~~g~~~~~ 132 (238)
.+.+...+..|..+.+ +.+...|..++.... ++.+...+..|..+-+ +.+.+.|..|+.
T Consensus 109 -n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~ 175 (501)
T 4g26_A 109 -TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVESEVVPEE 175 (501)
T ss_dssp -HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCH
T ss_pred -HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCH
Confidence 2344455666665433 333345665554332 2444555566665433 333445665544
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=42.53 E-value=71 Score=26.50 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=16.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHH
Q 041573 70 DDMSAIHFASQKGHLEVVRTLVS 92 (238)
Q Consensus 70 ~g~t~L~~A~~~~~~~~v~~Ll~ 92 (238)
-|.|.+|+|+++.+.+++..|+.
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhh
Confidence 46677777777777777777765
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=42.10 E-value=26 Score=18.22 Aligned_cols=16 Identities=31% Similarity=0.572 Sum_probs=11.1
Q ss_pred HHHHHHHcCCHHHHHH
Q 041573 7 ELHAAARSGDLKAVQS 22 (238)
Q Consensus 7 ~L~~A~~~g~~~~v~~ 22 (238)
.+..||..|+++.++.
T Consensus 16 qiyvA~seGd~etv~~ 31 (40)
T 1gp8_A 16 QMDAAASKGDVETYRK 31 (40)
T ss_dssp HHHHHHTTSCHHHHHH
T ss_pred HHHHHHhcCCHHHHHH
Confidence 4566777777777763
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=41.76 E-value=78 Score=26.27 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=41.1
Q ss_pred HcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHcCCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCHHHHHHHHh
Q 041573 47 WSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQKGHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHLELVKYLLR 125 (238)
Q Consensus 47 ~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~ 125 (238)
..|+...|+..+..|.+++. ..|.--.+..+ +.+ + -.-|.|.+|+|++..+.+++..|+.
T Consensus 31 ~e~~~~~ve~y~~~gg~~~r----~lt~~e~~lln------------~~~--a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGDIAR----QLTADEVRLLN------------RPS--A-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHTCHHHHHHHHTTTCCTTC----CCCHHHHHHHC------------CTT--T-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCchhc----ccCHHHHHHhC------------CCc--c-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 45788888888888777653 22333333221 222 2 3458999999999999999999987
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=39.52 E-value=1e+02 Score=22.12 Aligned_cols=132 Identities=9% Similarity=0.049 Sum_probs=80.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCCcH-HHHHHHcCCHHHHHHHHHCCCCcCccccCCchHHHHHHHc
Q 041573 3 NREEELHAAARSGDLKAVQSILISNPLSVNSRDKHSRTP-LHLAAWSGQTEVVSYLCKNKADVGAAAMDDMSAIHFASQK 81 (238)
Q Consensus 3 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~-L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 81 (238)
+.++-+-.|+..|+++....+..... +..-|.- =..|...|+.++++.-..+--++. ..+++....
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~t 73 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLN------DSITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLVT 73 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHC------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhC------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHHh
Confidence 45667789999999998876654321 1112222 245677899999888777654442 345555566
Q ss_pred CCHHHHHHHHHCCCCccccccCCCcHHHHHHHCCCH-HHHHHHHhcCCCccccCCCCCCHHHhhcchhHHHHHHHHHhh
Q 041573 82 GHLEVVRTLVSSGVSIKACTRKGLNPLHYAVQGSHL-ELVKYLLRKGASLTAKTKAGKTPLDLARNEEIRSFLEEWEQS 159 (238)
Q Consensus 82 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~-~~~~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~ 159 (238)
|+.+-+..|.+. -....+-+...+.+...|.. +++++|.+.|--+ -+.-+|..++..++.+.+++.
T Consensus 74 g~~e~L~kla~i----A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 74 GDVNKLSKMQNI----AQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp TCHHHHHHHHHH----HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH----HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHHH
Confidence 777776666432 01112234577777777776 6788887765422 234556667777776666543
No 120
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=33.38 E-value=44 Score=31.56 Aligned_cols=91 Identities=10% Similarity=0.086 Sum_probs=60.0
Q ss_pred HHHHHHHcCCHHHHHHHH-------HCCCCcCccccCCchHHHHHHHcCCHH----HHHHHHHCCCCccccccCCCcHHH
Q 041573 41 PLHLAAWSGQTEVVSYLC-------KNKADVGAAAMDDMSAIHFASQKGHLE----VVRTLVSSGVSIKACTRKGLNPLH 109 (238)
Q Consensus 41 ~L~~A~~~g~~~~~~~Ll-------~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~ 109 (238)
.+...|..|..+-...|+ ..|+.++.... .+.++.-|..|..+ +++.+...|..+|.... ++.++
T Consensus 133 LIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTY--NtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY--ntLI~ 208 (1134)
T 3spa_A 133 FFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMY--NAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY--AAALQ 208 (1134)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHH--HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH--HHHHH
Confidence 345667889887666665 23666666543 36677778888865 44555568988887654 46667
Q ss_pred HHHHCCC-H----HHHHHHHhcCCCccccCC
Q 041573 110 YAVQGSH-L----ELVKYLLRKGASLTAKTK 135 (238)
Q Consensus 110 ~A~~~g~-~----~~~~~Ll~~g~~~~~~~~ 135 (238)
..++.|. . ++++.+.+.|..+|....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY 239 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEGLKLQALFT 239 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcCCCCChhhc
Confidence 6677775 2 455566677998877543
No 121
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=26.48 E-value=1.6e+02 Score=24.79 Aligned_cols=102 Identities=14% Similarity=0.025 Sum_probs=61.4
Q ss_pred HhCCCCcccCCCCCCcHHHHHHHcCCHHHHHH----HHHCCCCcCccccCCchHHHHHHHcCCHHH----HHHHHHCCCC
Q 041573 25 ISNPLSVNSRDKHSRTPLHLAAWSGQTEVVSY----LCKNKADVGAAAMDDMSAIHFASQKGHLEV----VRTLVSSGVS 96 (238)
Q Consensus 25 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~----v~~Ll~~g~~ 96 (238)
...|+.+|... -.+.+...+..|..+-+.. +...|..++.... .+.|...+..|..+- .+.+...|..
T Consensus 97 ~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~ 172 (501)
T 4g26_A 97 IVDKVVPNEAT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVESEVV 172 (501)
T ss_dssp HHTTCCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHhCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 34566554332 1334566677888765444 4456887765542 245556678888764 4555567888
Q ss_pred ccccccCCCcHHHHHHHCCCHHHHHHHHh----cCCCccc
Q 041573 97 IKACTRKGLNPLHYAVQGSHLELVKYLLR----KGASLTA 132 (238)
Q Consensus 97 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~----~g~~~~~ 132 (238)
++.... .+.+...+..|..+-+..+++ .|..|+.
T Consensus 173 Pd~~ty--~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~ 210 (501)
T 4g26_A 173 PEEPEL--AALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 210 (501)
T ss_dssp CCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCH
T ss_pred CCHHHH--HHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCH
Confidence 876543 356677788898765555543 4665543
No 122
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=21.07 E-value=82 Score=29.79 Aligned_cols=92 Identities=9% Similarity=0.078 Sum_probs=59.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHHh------CCCCcccCCCCCCcHHHHHHHcCCHH----HHHHHHHCCCCcCccccCCchH
Q 041573 5 EEELHAAARSGDLKAVQSILIS------NPLSVNSRDKHSRTPLHLAAWSGQTE----VVSYLCKNKADVGAAAMDDMSA 74 (238)
Q Consensus 5 ~t~L~~A~~~g~~~~v~~ll~~------~~~~~~~~~~~g~t~L~~A~~~g~~~----~~~~Ll~~g~~~~~~~~~g~t~ 74 (238)
++.|...|+.|+.+....++.. .|+.+|... =++.++--|..|..+ +++.+...|..+|..... +.
T Consensus 131 naLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvT--YNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn--tL 206 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDM--YNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA--AA 206 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH--HH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH--HH
Confidence 3556677889999887777632 244444332 235566678888775 445555679988876542 55
Q ss_pred HHHHHHcCC-H----HHHHHHHHCCCCcccc
Q 041573 75 IHFASQKGH-L----EVVRTLVSSGVSIKAC 100 (238)
Q Consensus 75 L~~A~~~~~-~----~~v~~Ll~~g~~~~~~ 100 (238)
|..-|+.|. . ++++.+...|..+|..
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~kG~~PD~v 237 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQEGLKLQAL 237 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHTCCSHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCCCChh
Confidence 666677675 2 4666667788888754
Done!