BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041574
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SQH6|PIN6_ARATH Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana
GN=PIN6 PE=2 SV=2
Length = 570
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/315 (73%), Positives = 260/315 (82%), Gaps = 25/315 (7%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MITGN+FY VMCAM PLYFAM +AYGSVKW +IFTP QCSGINRFV+VFAVPVLSFHFI+
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
QNNPY+MDT FILADTLSK+ V VLLS+WA+FFK GGLDWLITLFS+ATLPNTLVMGIPL
Sbjct: 61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L AMYG++TQ+LMVQLVVLQCIIWYTLLLFLFE RAA +LI+ +FPG AA SIAK ++D+
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
DVISLDG DPL+TE+ETD NGRIR+RIRRS SS PDS +SSS+CLTPRASNLSNAEIFS+
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240
Query: 240 NTPAPLHDYH----------YNSNNEIVFW------------GSATSP-RLSNYASSDAY 276
NTP +H YN +NEI+F G SP RLS YASSDAY
Sbjct: 241 NTPNN-RFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAY 299
Query: 277 SLQPTPRASNFNEMD 291
SLQPTPRASNFNE+D
Sbjct: 300 SLQPTPRASNFNELD 314
>sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c OS=Oryza sativa subsp.
japonica GN=PIN1C PE=2 SV=1
Length = 592
Score = 333 bits (853), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 219/299 (73%), Gaps = 17/299 (5%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MITG DFY VM AMVPLY AM++AYGSVKWWRIFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
NNPY M+ +FI ADTL K++VL LL++W+ + +G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L MYGEF+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI QFP A A IA +D
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGA-IASIVVDA 179
Query: 180 DVISLDG-RDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICL---TPRASNLSNAE 235
DV+SLDG RD ++TE+E +G+I V +RRS +S D S+ TPR SNL+NAE
Sbjct: 180 DVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAE 239
Query: 236 IFSINT---PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ--PTPRASNFNE 289
I+S+ + P P +S N F+ + R SN+A+ DA+ ++ TPR SN+ E
Sbjct: 240 IYSLQSSRNPTP----RGSSFNHTDFY--SMVGRSSNFAAGDAFGVRTGATPRPSNYEE 292
>sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1
PE=1 SV=1
Length = 622
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 212/299 (70%), Gaps = 15/299 (5%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MIT DFY VM AMVPLY AM++AYGSVKWW+IFTP QCSGINRFVA+FAVP+LSFHFIA
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
NNPY M+ +F+ AD+L KV+VL LL +W + G LDW ITLFS++TLPNTLVMGIPL
Sbjct: 61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L MYG F+ LMVQ+VVLQCIIWYTL+LFLFEYR A +LI QFP A SI +D+
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPD-TAGSIVSIHVDS 179
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPD--SALSSSICLTPRASNLSNAEIF 237
D++SLDGR PL+TE+E +G++ V +RRS +S D S S + TPR SNL+NAEI+
Sbjct: 180 DIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEIY 239
Query: 238 SINT---PAPLHDYHYNSNNEIVFWG--SATSPRLSNYASSDAY--SLQPTPRASNFNE 289
S+ + P P +S N F+ ++ R SN+ +A S PTPR SN+ E
Sbjct: 240 SLQSSRNPTP----RGSSFNHTDFYSMMASGGGRNSNFGPGEAVFGSKGPTPRPSNYEE 294
>sp|Q940Y5|PIN7_ARATH Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7
PE=1 SV=2
Length = 619
Score = 327 bits (839), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/295 (55%), Positives = 218/295 (73%), Gaps = 11/295 (3%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MIT +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
NNPY M+ +FI ADTL K+++L LL +WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct: 61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI QFP ASI F++++
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFP-ETGASIVSFKVES 179
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
DV+SLDG D L+T+++ +G++ V +R+S +S +TPR SNL+ AEI+S+
Sbjct: 180 DVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFYGGGGTNMTPRPSNLTGAEIYSL 239
Query: 240 N-TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
N TP + H + + + F G RLSN+ +D YS+Q PTPR SNF E
Sbjct: 240 NTTPRGSNFNHSDFYSMMGFPGG----RLSNFGPADMYSVQSSRGPTPRPSNFEE 290
>sp|Q5SMQ9|PIN1_ORYSJ Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica
GN=PIN1 PE=2 SV=1
Length = 595
Score = 327 bits (838), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 217/299 (72%), Gaps = 17/299 (5%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MIT DFY VM AMVPLY AM++AYGSVKWWRIFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
NNPY M+ +FI ADTL K++VL +L+ W+ + +G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L MYGEF+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI QFP AA+IA +D
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPD-TAANIASIVVDP 179
Query: 180 DVISLDG-RDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICL---TPRASNLSNAE 235
DV+SLDG RD ++TE+E +GRI V +RRS +S D S+ TPR SNL+NAE
Sbjct: 180 DVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAE 239
Query: 236 IFSINT---PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ--PTPRASNFNE 289
I+S+ + P P +S N F+ R SN+ ++DA+ ++ TPR SN+ +
Sbjct: 240 IYSLQSSRNPTP----RGSSFNHTDFYSMVG--RSSNFGAADAFGVRTGATPRPSNYED 292
>sp|Q8RWZ6|PIN4_ARATH Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4
PE=1 SV=1
Length = 616
Score = 326 bits (836), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/298 (55%), Positives = 222/298 (74%), Gaps = 17/298 (5%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MIT +D Y V+ A+VPLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
N+PY M+ +F+ ADTL K+++LVLL++WA K G L+W+IT+FS++TLPNTLVMGIPL
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L AMYG + SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI QFP ASI F++++
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFP-ETGASIVSFKVES 179
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
DV+SLDG D L+T++E +G++ V +R+S +S S+ +TPR SNL+ AEI+S+
Sbjct: 180 DVVSLDGHDFLETDAEIGNDGKLHVTVRKSNAS------RRSLMMTPRPSNLTGAEIYSL 233
Query: 240 -NTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNEMDA 292
+TP + H + + + F G RLSN+ +D YS+Q PTPR SNF E +A
Sbjct: 234 SSTPRGSNFNHSDFYSVMGFPGG----RLSNFGPADLYSVQSSRGPTPRPSNFEENNA 287
>sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3
PE=1 SV=1
Length = 640
Score = 324 bits (830), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/298 (56%), Positives = 221/298 (74%), Gaps = 20/298 (6%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI+ +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
NNPY M+ +FI ADTL K+++L LL +WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct: 61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFE+R A +LI QFP AASI F++++
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFP-ETAASIVSFKVES 179
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSIC---LTPRASNLSNAEI 236
DV+SLDG D L+T++E +G++ V +R+S +S S C +TPR SNL+ AEI
Sbjct: 180 DVVSLDGHDFLETDAEIGDDGKLHVTVRKSNAS------RRSFCGPNMTPRPSNLTGAEI 233
Query: 237 FSIN-TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
+S++ TP + H + N + F G RLSN+ +D YS+Q PTPR SNF E
Sbjct: 234 YSLSTTPRGSNFNHSDFYNMMGFPGG----RLSNFGPADMYSVQSSRGPTPRPSNFEE 287
>sp|Q9LU77|PIN2_ARATH Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2
PE=1 SV=2
Length = 647
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 220/317 (69%), Gaps = 31/317 (9%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MITG D Y V+ AMVPLY AM++AYGSV+WW IFTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIF-FKGGLDWLITLFSVATLPNTLVMGIPL 119
N+PY M+ F+ AD+L KV++L L +W F +G L+W+ITLFS++TLPNTLVMGIPL
Sbjct: 61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
L AMYG+F+ +LMVQ+VVLQ IIWYTL+LFLFE+R A +LI QFP A SI F +D+
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFP-ETAGSITSFRVDS 179
Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRST---------SSAPDSALSSSICLTPRASN 230
DVISL+GR+PL+T++E +G++ V +RRS+ + + L+SS+ +TPRASN
Sbjct: 180 DVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSM-ITPRASN 238
Query: 231 LSNAEIFSINT---PAPLHDYHYNSNNEIVFWGS-ATSPRLSNYASS----------DAY 276
L+ EI+S+ + P P ++ +F S A SPR Y +S D Y
Sbjct: 239 LTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPR-HGYTNSYGGAGAGPGGDVY 297
Query: 277 SLQP----TPRASNFNE 289
SLQ TPR SNF+E
Sbjct: 298 SLQSSKGVTPRTSNFDE 314
>sp|Q651V6|PIN2_ORYSJ Probable auxin efflux carrier component 2 OS=Oryza sativa subsp.
japonica GN=PIN2 PE=2 SV=1
Length = 630
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 201/312 (64%), Gaps = 56/312 (17%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MITG D Y V+ A+VPLY AM +AYGSV+WW IFTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFF-----KGG----LDWLITLFSVATLPN 111
N+PY M+ +F+ AD+L K+++L L+VW GG LDW ITLFS++TLPN
Sbjct: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
Query: 112 TLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAAS 171
TLVMGIPLL AMYG+F+ SLMVQ+VVLQ +IWYTL+LFLFEYR A LI QFP AS
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
Query: 172 IAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAP------------DSALS 219
IA F +D+DV+SL+GR+ L+ ++E +GR+ V IRRS S++ A
Sbjct: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGVSRAYG 240
Query: 220 SSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ 279
+S +TPRASNL+ EI+S+ T S +
Sbjct: 241 ASNAMTPRASNLTGVEIYSLQT-----------------------------------SRE 265
Query: 280 PTPRASNFNEMD 291
PTPRAS+FN+ D
Sbjct: 266 PTPRASSFNQAD 277
>sp|Q5VP70|PIN3A_ORYSJ Probable auxin efflux carrier component 3a OS=Oryza sativa subsp.
japonica GN=PIN3A PE=2 SV=1
Length = 618
Score = 290 bits (743), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/308 (53%), Positives = 215/308 (69%), Gaps = 24/308 (7%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI+G+DFY VM A+VPLY AM +AYGSV+WW IFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGG---LDWLITLFSVATLPNTLVMG 116
N+PY M+ +F+ ADTL K+LVL L+ W+ + + G LDW ITLFS++TLPNTLVMG
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
Query: 117 IPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFE 176
IPLL AMYG ++ SLMVQ+VVLQCIIWYTL+LFLFE+RAA +LI QFP AASI
Sbjct: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPD-TAASIVSLH 179
Query: 177 LDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEI 236
+D DV+SL+G +TE+E +GR+ V +RRS+ S S+ +TPR SNL+ AEI
Sbjct: 180 VDPDVVSLEGGH-AETEAEVAADGRLHVTVRRSSVS------RRSLLVTPRPSNLTGAEI 232
Query: 237 FSINT---PAPL-----HDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRA 284
+S+++ P P H + + + R S++ +S+ YSLQ PTPR
Sbjct: 233 YSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGASELYSLQSSRGPTPRQ 292
Query: 285 SNFNEMDA 292
SNF+E A
Sbjct: 293 SNFDEHSA 300
>sp|P0C0X5|PIN1B_ORYSJ Probable auxin efflux carrier component 1b OS=Oryza sativa subsp.
japonica GN=PIN1B PE=2 SV=1
Length = 554
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 196/305 (64%), Gaps = 50/305 (16%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MIT D Y V+ A+VPLY AM +AY SV+WWRIF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
NNP+ M+ +F+ ADTL K++VL LL++W + +G LDWLITLFS++TLPNTLVMGIPL
Sbjct: 61 TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPL 120
Query: 120 LSAMYGEF----TQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKF 175
L MY + SLMVQ+VVLQCIIWYTL+LFLFEYR A +L+ QFP AASI F
Sbjct: 121 LKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPD-TAASIVSF 179
Query: 176 ELDNDVISL----DGRDPLKTESETDGNGRIRVRIRRSTSSAPDSAL-----SSSICLTP 226
+D+DV+SL G L+ E+E +GR+RV +R+STSS ++A S S + P
Sbjct: 180 RVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQP 239
Query: 227 RASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASN 286
R SNLS EI+S+ + S PTPR S+
Sbjct: 240 RVSNLSGVEIYSLQS-----------------------------------SRNPTPRGSS 264
Query: 287 FNEMD 291
FN +
Sbjct: 265 FNHAE 269
>sp|Q6L5F6|PIN3B_ORYSJ Putative auxin efflux carrier component 3b OS=Oryza sativa subsp.
japonica GN=PIN3B PE=3 SV=2
Length = 590
Score = 250 bits (639), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/318 (45%), Positives = 196/318 (61%), Gaps = 50/318 (15%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI+ ++ Y V+ A+VPLY AM++AYGSV+WW + TP+QCSGINRFVAV AVP+LSFHFI+
Sbjct: 1 MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKG-------GLDWLITLFSVATLPNTL 113
++PY M+ +F+ ADTL KVLVL L+ W+ F LD ITLFSV+TLPNTL
Sbjct: 61 SSDPYAMNLRFVAADTLQKVLVLAALAAWSRFPARFVPPAWPPLDCSITLFSVSTLPNTL 120
Query: 114 VMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIA 173
VMGIPLL +MYG ++ LMVQ+VVLQ I+WYTLLLFLFE+RAA VLI QFP AASIA
Sbjct: 121 VMGIPLLVSMYGPYSGDLMVQIVVLQSIVWYTLLLFLFEFRAARVLIAAQFPD-TAASIA 179
Query: 174 KFELDNDVISLDGRDPLKTESETDGNGRIRVRI-----------------RRSTSSAPDS 216
+D DV+SL+G + +E +GR+R+ + + +
Sbjct: 180 AVHVDPDVVSLEGSQ-AEAHAEVAPDGRLRMVVCRSSVSRRSAAAAATPRASNLTGVEIY 238
Query: 217 ALSSSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAY 276
++SSS TPR S + A+I H N+ + R S++ ++D +
Sbjct: 239 SISSSRNATPRGSTFTLADI----------PGHQPPNSAL---------RASSFGAADLF 279
Query: 277 SL-----QPTPRASNFNE 289
SL Q TPR S+F+E
Sbjct: 280 SLHSSSRQHTPRPSSFDE 297
>sp|Q5JLM1|PIN6_ORYSJ Probable auxin efflux carrier component 6 OS=Oryza sativa subsp.
japonica GN=PIN6 PE=2 SV=1
Length = 363
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI D YKV+ A VPLYFA+ + YGSV+WWRIFT +QC +NR VA FA+P +F F
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFF-KGG--LDWLITLFSVATLPNTLVMGI 117
+P+Q++ + + AD +SK +++ ++ WA F KGG + W IT FS++TL N+LV+G+
Sbjct: 61 HTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGV 120
Query: 118 PLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATV 158
P+ AMYGE+ Q L+VQL V Q I+W TLLLF+ E R A +
Sbjct: 121 PMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAI 161
>sp|Q5VQY3|PIN5_ORYSJ Probable auxin efflux carrier component 5 OS=Oryza sativa subsp.
japonica GN=PIN5 PE=2 SV=1
Length = 426
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 116/168 (69%), Gaps = 15/168 (8%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MITG++ Y+V+ AM PLY A + YGSV+W + F+ +QC+GIN FVA++AVPVL F ++
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG---------------LDWLITLFS 105
NN Y+M+ + I ADTL K ++L+ L WA++ + L W+IT FS
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLGLMAWALWERSRARGAGAKAKAAVSSPLQWVITCFS 120
Query: 106 VATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEY 153
VA+LPNT++MG+PLL+ MYG ++ LM Q+VV+Q IWY +++FL+EY
Sbjct: 121 VASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYEY 168
>sp|Q9FFD0|PIN8_ARATH Putative auxin efflux carrier component 8 OS=Arabidopsis thaliana
GN=PIN8 PE=3 SV=2
Length = 351
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 123/197 (62%), Gaps = 10/197 (5%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI D YKV+ AMVPLY A+++ YGSVKWW IFT QC INR V F +P+ + F A
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFF-KGGLDWLITLFSVATLPNTLVMGIPL 119
+P+ M+ +FI AD LSKV+++ +L++WA + KG W IT FS+ TL N+LV+G+PL
Sbjct: 61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120
Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
AMYG+ L+VQ V Q I+W TLLLF+ E+R A G ++ +I+ ++DN
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKA---------GFSSNNISDVQVDN 171
Query: 180 DVISLDGRDPLKTESET 196
I R+ + ++
Sbjct: 172 INIESGKRETVVVGEKS 188
>sp|Q9LFP6|PIN5_ARATH Putative auxin efflux carrier component 5 OS=Arabidopsis thaliana
GN=PIN5 PE=3 SV=1
Length = 367
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 119/165 (72%), Gaps = 6/165 (3%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI+ D Y V+ A VPLY +M + + S + ++F+P+QC+GIN+FVA F++P+LSF I+
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK------GGLDWLITLFSVATLPNTLV 114
+NNP++M K IL+D L K LV+V+L++ F+ G L W+IT S++ LPNTL+
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120
Query: 115 MGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVL 159
+G+P+LSA+YG+ S++ Q+VVLQ +IWYT+LLFLFE AA L
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARAL 165
>sp|Q6ZIB5|PIN4_ORYSJ Probable auxin efflux carrier component 4 OS=Oryza sativa subsp.
japonica GN=PIN4 PE=2 SV=1
Length = 370
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
MI D YKV+ AM PLYFA+ + YGSV+WWR FT +QC+ IN V F++P +F F+
Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV 60
Query: 61 QNNPYQMDTKFILADTLSKVLVLVLL-------SVWAIFFKGGLDWLITLFSVATLPNTL 113
+ +P+ M+ + I AD +SK + + + A G W IT FS+A L NTL
Sbjct: 61 RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTL 120
Query: 114 VMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAAS 171
V+G+PLL AMYG + Q L+VQ+ V+Q ++W+ LLL FE R A V+ GPA S
Sbjct: 121 VVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMS 178
>sp|Q7Z3F1|GP155_HUMAN Integral membrane protein GPR155 OS=Homo sapiens GN=GPR155 PE=2
SV=2
Length = 870
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 33 IFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSK--------VLVLV 84
+ T Q G+ FV+ FA+P L F + N +D F+ + ++K VL L+
Sbjct: 64 VITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVLTLL 123
Query: 85 LLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMY 124
+ S + F K G L +F AT N +G P++ A+Y
Sbjct: 124 VASPDSRFSKAG---LFPIF--ATQSNDFALGYPIVEALY 158
>sp|Q5R9A7|GP155_PONAB Integral membrane protein GPR155 OS=Pongo abelii GN=GPR155 PE=2
SV=1
Length = 872
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 33 IFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSK--------VLVLV 84
+ T Q G+ FV+ FA+P L F + N +D F+ + ++K VL L+
Sbjct: 66 VITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVLTLL 125
Query: 85 LLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMY 124
+ S + F K G L +F AT N +G P++ A+Y
Sbjct: 126 VASPDSRFSKAG---LFPIF--ATQSNDFALGYPIVEALY 160
>sp|Q5SVL6|RPGP2_MOUSE Rap1 GTPase-activating protein 2 OS=Mus musculus GN=Rap1gap2 PE=1
SV=1
Length = 712
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 159 LIQTQFPGPAAASIAKFELDNDVISLDGRDP-LKTESETDGNGRIRVRIRRSTSSAPDSA 217
+ +T F P AA+ AK + + + G P L + SE G+ R R ST PD
Sbjct: 519 VTKTTFSPPVAAATAKNQSRSPIKRRSGLFPRLHSGSEGQGDSRTRCDSASSTPKTPDGG 578
Query: 218 LSSSICLTPRASNLSNAEI 236
SS + +SN S+ EI
Sbjct: 579 HSSQEIKSETSSNPSSPEI 597
>sp|Q8K4L3|SVIL_MOUSE Supervillin OS=Mus musculus GN=Svil PE=1 SV=1
Length = 2170
Score = 33.1 bits (74), Expect = 2.6, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 173 AKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLS 232
AK D DV G+ + E D N R T S P ++L +S TP SN+S
Sbjct: 132 AKSRKDPDVTERRGKSDKQEEQSKDANSR-----HSRTESGPRTSLVASQDCTPLGSNMS 186
Query: 233 NAE 235
+ E
Sbjct: 187 DQE 189
>sp|Q03758|BUL2_YEAST Ubiquitin ligase-binding protein BUL2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BUL2 PE=1 SV=1
Length = 920
Score = 32.7 bits (73), Expect = 3.1, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 185 DGRDPLKTESETDGNGRIRVRIRRSTSS-APDSALSSSICLTPRASNLSNAEIFSINT 241
+GR PLK+ S D +R R ++ SS + D++L + TPRAS+ + +I S +T
Sbjct: 12 NGRPPLKSVSTEDNIHLLRKRRQQQLSSNSTDNSLHPNSGQTPRASDSQDDDIRSAST 69
>sp|A5D5I2|RPOB_PELTS DNA-directed RNA polymerase subunit beta OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=rpoB PE=3 SV=1
Length = 1224
Score = 32.3 bits (72), Expect = 4.3, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 156 ATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPD 215
ATVL++ G A F D +++ RD T+SE + I R+R D
Sbjct: 190 ATVLVRALGYGTKAQVAELFNEDKNILETLARD--NTDSEEEALVEIYKRLRPGEPPTVD 247
Query: 216 SALS--SSICLTPRASNLSNAEIFSINTP---APLHDYHYNSNNEIVF 258
SA S +S+ P+ +L+N + I L+ Y N + + VF
Sbjct: 248 SARSLLTSLFFDPKRYDLANVGRYKIQKKLKHGVLYRYGPNPDGKTVF 295
>sp|Q684P5|RPGP2_HUMAN Rap1 GTPase-activating protein 2 OS=Homo sapiens GN=RAP1GAP2 PE=1
SV=2
Length = 730
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 159 LIQTQFPGPAAASIAKFELDNDVISLDGRDP-LKTESETDGNGRIRVRIRRSTSSAPDSA 217
+ +T F P A+ K + + + G P L T SE G+ R R ST PD
Sbjct: 538 VTKTTFSPPVVAATVKNQSRSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGG 597
Query: 218 LSSSICLTPRASNLSNAEI 236
SS + +SN S+ EI
Sbjct: 598 HSSQEIKSETSSNPSSPEI 616
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,998,423
Number of Sequences: 539616
Number of extensions: 3816933
Number of successful extensions: 11613
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11506
Number of HSP's gapped (non-prelim): 63
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)