BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041575
(263 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 17/261 (6%)
Query: 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALAS 60
++G L H + KYGPI++++MG ++V + ++ KE K +
Sbjct: 18 LVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSG 77
Query: 61 RPRRMAMEILGYNFLATPSSPYGSYWRETRKIATVELL----SNHRLEKLKHVRESEVTA 116
RP+ ++I N + G++W+ R++A + +LEK+ +
Sbjct: 78 RPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKI-------ICQ 130
Query: 117 SIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGTDLHEHAASFFTL 176
I L + + ++ T +I + E + +
Sbjct: 131 EISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDN 190
Query: 177 FGKFVVSDALPFLRWLDIGGNEKL--MKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDF 234
K + D +P WL I N+ L +K K + +L + L+ +K K S + D
Sbjct: 191 LSKDSLVDLVP---WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDT 247
Query: 235 IYVMLSLLYDNAKQLPDSDAD 255
+ + + DN PD D++
Sbjct: 248 L-MQAKMNSDNGNAGPDQDSE 267
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 7 LFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASR---PR 63
L E H + + YG IF++ +G +V++ ++ KEC + A R P
Sbjct: 29 LAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88
Query: 64 RMAMEILGYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFK 123
M M +G +S YG W + R++A +K ES++ K F
Sbjct: 89 FMKMTKMG----GLLNSRYGRGWVDHRRLAVNSFRYFGYGQK---SFESKILEETK-FFN 140
Query: 124 DCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGTDLHEHAASFFTLFGKFVVS 183
D + G+ + K + +I II G+R+T E TD +H F+ + S
Sbjct: 141 DAIETYKGR-PFDFKQLITNAVSNITNLIIFGERFT-YEDTDF-QHMIELFSENVELAAS 197
Query: 184 ------DALPFLRWLDIGGNEKLMKKTAKEFDII 211
+A P++ L G +++L + A +D +
Sbjct: 198 ASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFL 231
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASR---PRRMAME 68
E H + + YG IF++ +G +V++ ++ KEC + A R P M M
Sbjct: 34 ELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT 93
Query: 69 ILGYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNS 128
+G +S YG W + R++A +K ES++ K F D +
Sbjct: 94 KMG----GLLNSRYGRGWVDHRRLAVNSFRYFGYGQK---SFESKILEETK-FFNDAIET 145
Query: 129 ATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGTDLHEHAASFFTLFGKFVVS----- 183
G+ + K + +I II G+R+T E TD +H F+ + S
Sbjct: 146 YKGR-PFDFKQLITNAVSNITNLIIFGERFT-YEDTDF-QHMIELFSENVELAASASVFL 202
Query: 184 -DALPFLRWLDIGGNEKLMKKTAKEFDII 211
+A P++ L G +++L + A +D +
Sbjct: 203 YNAFPWIGILPFGKHQQLFRNAAVVYDFL 231
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 13/227 (5%)
Query: 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALAS 60
+IGH+ G + H L M+ +YG + +++G +V+S + ++
Sbjct: 21 LIGHMLTLG--KNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKG 78
Query: 61 RPRRMAMEIL--GYNFLATPSSPYGSYWRETRKIATVEL----LSNHRLEKLKHVRESEV 114
RP ++ G + +P S G W R++A L +++ E V
Sbjct: 79 RPDLYTFTLISNGQSMSFSPDS--GPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHV 136
Query: 115 TASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY--TSQEGTDLHEHAAS 172
+ + L Q G ++ + ++I I G+RY QE L +
Sbjct: 137 SKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNN 196
Query: 173 FFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEH 219
F + G +D +P LR+L + K ++F +Q+ + EH
Sbjct: 197 FGEVVGSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMVKEH 242
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 20 NMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYN------ 73
+ ++G +F++++ +V++ +E T+ + A RP +ILG+
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 74 FLATPSSPYGSYWRETRKIATVEL 97
FLA YG WRE R+ + L
Sbjct: 98 FLAR----YGPAWREQRRFSVSTL 117
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 20 NMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYN------ 73
+ ++G +F++++ +V++ +E T+ + A RP +ILG+
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 74 FLATPSSPYGSYWRETRKIATVEL 97
FLA YG WRE R+ + L
Sbjct: 98 FLAR----YGPAWREQRRFSVSTL 117
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 17/227 (7%)
Query: 18 LGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77
L N++ YGP+FT+ G+ R +V+ E+ KE + + R E F
Sbjct: 37 LTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIV 96
Query: 78 PSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEM 137
S+ G W+E R+ + L++ K E V + L ++ + + +
Sbjct: 97 FSN--GKRWKEIRRFS---LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKAS--PCDP 149
Query: 138 KHWLEGTTFDIIIRIIEGKR--YTSQEGTDLHEHAASFFTLFGK--FVVSDALPFLRWLD 193
L ++I II KR Y Q+ +L E + + + P +
Sbjct: 150 TFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYF 209
Query: 194 IGGNEKLMKKTA-KEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239
G + KL+K A E DI+ + + EH+ S ++ DFI L
Sbjct: 210 PGTHNKLLKNLAFMESDIL--EKVKEHQ---ESMDINNPRDFIDCFL 251
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 85/225 (37%), Gaps = 9/225 (4%)
Query: 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALAS 60
++GH+ G + H L M+ +YG + +++G LV+S + ++
Sbjct: 26 LLGHVLTLG--KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKG 83
Query: 61 RPRRMAMEILGYNFLATPSSPYGSYWRETRKIATVEL----LSNHRLEKLKHVRESEVTA 116
RP ++ T S+ G W R++A L +++ E V+
Sbjct: 84 RPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSK 143
Query: 117 SIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY--TSQEGTDLHEHAASFF 174
K L Q G + + + + ++I + G+ + +S E L ++ F
Sbjct: 144 EAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFV 203
Query: 175 TLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEH 219
D P LR+L ++ K + F LQ+ + EH
Sbjct: 204 ETASSGNPLDFFPILRYLPNPALQRF-KAFNQRFLWFLQKTVQEH 247
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 32/208 (15%)
Query: 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALAS 60
+IG+ G + H +A +YG +F +++G +V++ + A A
Sbjct: 19 LIGNAAAVG--QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFAD 76
Query: 61 RPRRMAMEIL-GYNFLATPSSPYGSYWRETRKIA-------------TVELLSNHRLEKL 106
RP + ++ G +A Y +W+ R+ A + ++L H L +
Sbjct: 77 RPSFASFRVVSGGRSMAF--GHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEA 134
Query: 107 KHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT--SQEGT 164
+ + V S G F D + V+ +++ + G RY+ E
Sbjct: 135 RELVALLVRGSADGAFLDPRPLTVVAVA------------NVMSAVCFGCRYSHDDPEFR 182
Query: 165 DLHEHAASFFTLFGKFVVSDALPFLRWL 192
+L H F G + D +P+L++
Sbjct: 183 ELLSHNEEFGRTVGAGSLVDVMPWLQYF 210
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 3 GHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRP 62
G LHL P H L ++ K GP++ +++G+ +V+++ +E A RP
Sbjct: 36 GFLHLLQPNLPIH--LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93
Query: 63 RRMAMEILGYNFLATPSSPYGSYWRETRKIATVELLSNHR 102
+ + +++ Y W+ +K+ LL R
Sbjct: 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR 133
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 15/226 (6%)
Query: 18 LGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77
L N++ YGP+FT+ G+ +V+ E KE + + R E F
Sbjct: 35 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 94
Query: 78 PSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEM 137
S+ G W+E R+ + L++ K E V + L ++ + T +
Sbjct: 95 FSN--GKKWKEIRRFS---LMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDP 147
Query: 138 KHWLEGTTFDIIIRIIEGKR--YTSQEGTDLHEHAASFFTLFGK--FVVSDALPFLRWLD 193
L ++I II KR Y Q+ +L E + V + P L
Sbjct: 148 TFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYF 207
Query: 194 IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239
G + KL+K A IL++ + EH+ S ++ +DFI L
Sbjct: 208 PGTHNKLLKNVAFMKSYILEK-VKEHQ---ESMDMNNPQDFIDCFL 249
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 31/232 (13%)
Query: 20 NMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPS 79
N + YGP+FT+ G+N +V E KE N + + R + + S
Sbjct: 38 NFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISS 97
Query: 80 SPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKH 139
+ G W+E R+ + L K E V L ++ + T +
Sbjct: 98 N--GKRWKEIRRFSLTTL---RNFGMGKRSIEDRVQEEAHCLVEELR--KTKASPCDPTF 150
Query: 140 WLEGTTFDIIIRIIEGKRYTSQEGTDLHEHAASFFTLFGKF------------VVSDALP 187
L ++I ++ KR+ ++ +F TL +F V + P
Sbjct: 151 ILGCAPCNVICSVVFQKRFDYKD--------QNFLTLMKRFNENFRILNSPWIQVCNNFP 202
Query: 188 FLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239
L G + K++K A I ++ + EH+ S +V DFI L
Sbjct: 203 LLIDCFPGTHNKVLKNVALTRSYI-REKVKEHQ---ASLDVNNPRDFIDCFL 250
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 22/240 (9%)
Query: 21 MANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEIL--GYNFLATP 78
+ KYG +FT+ +G +V+ ++ +E +A + R + ++ + GY +
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA- 97
Query: 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMK 138
G WR R+ + L + K E + + L ++ + S + +
Sbjct: 98 ---NGERWRALRRFS---LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL- 150
Query: 139 HWLEGTTFDIIIRIIEGKRYTSQEGT-----DLHEHAASFFTLFGKFVVSDALPFLRWLD 193
T +II I+ GKR+ ++ DL + S + F V FL++
Sbjct: 151 -LFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 194 IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVMLSLLYDNAKQLPDSD 253
G + + + +E + + Q +++H R + + DFI V L L + K P S+
Sbjct: 210 --GTHRQIYRNLQEINTFIGQSVEKH---RATLDPSNPRDFIDVYL-LRMEKDKSDPSSE 263
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 22/240 (9%)
Query: 21 MANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEIL--GYNFLATP 78
+ KYG +FT+ +G +V+ ++ +E +A + R + ++ + GY +
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA- 97
Query: 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMK 138
G WR R+ + L + K E + + L ++ + S + +
Sbjct: 98 ---NGERWRALRRFS---LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL- 150
Query: 139 HWLEGTTFDIIIRIIEGKRYTSQEGT-----DLHEHAASFFTLFGKFVVSDALPFLRWLD 193
T +II I+ GKR+ ++ DL + S + F V FL++
Sbjct: 151 -LFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 194 IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVMLSLLYDNAKQLPDSD 253
G + + + +E + + Q +++H R + + DFI V L L + K P S+
Sbjct: 210 --GTHRQIYRNLQEINTFIGQSVEKH---RATLDPSNPRDFIDVYL-LRMEKDKSDPSSE 263
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 17/227 (7%)
Query: 18 LGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77
L N++ YGP+FT+ G+ +V+ E KE + + R E F
Sbjct: 37 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 96
Query: 78 PSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEM 137
S+ G W+E R+ + L++ K E V + L ++ + T +
Sbjct: 97 FSN--GKKWKEIRRFS---LMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDP 149
Query: 138 KHWLEGTTFDIIIRIIEGKR--YTSQEGTDLHEHAASFFTLFGKF---VVSDALPFLRWL 192
L ++I II KR Y Q+ +L E + + ++ P + +
Sbjct: 150 TFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF 209
Query: 193 DIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239
G + KL+K A IL++ + EH+ S ++ +DFI L
Sbjct: 210 P-GTHNKLLKNVAFMKSYILEK-VKEHQ---ESMDMNNPQDFIDCFL 251
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 38/266 (14%)
Query: 10 GPEPTHRILGNMAN---------------KYGPIFTMKMGVNRALVVSNSEITKECFTTN 54
GP P +LGN+ KYG +FT+ +G +V+ ++ +E
Sbjct: 14 GPSPLP-VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 55 DKALASRPRRMAMEIL--GYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRES 112
+A + R + ++ + GY + G WR R+ + L + K E
Sbjct: 73 AEAFSGRGKIAVVDPIFQGYGVIFA----NGERWRALRRFS---LATMRDFGMGKRSVEE 125
Query: 113 EVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGT-----DLH 167
+ + L ++ + S + + T +II I+ GKR+ ++ DL
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTL--LFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 168 EHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSE 227
+ S + F V FL++ G + + + +E + + Q +++H R + +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIYRNLQEINTFIGQSVEKH---RATLD 238
Query: 228 VEGDEDFIYVMLSLLYDNAKQLPDSD 253
DFI V L L + K P S+
Sbjct: 239 PSNPRDFIDVYL-LRMEKDKSDPSSE 263
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 38/266 (14%)
Query: 10 GPEPTHRILGNMAN---------------KYGPIFTMKMGVNRALVVSNSEITKECFTTN 54
GP P +LGN+ KYG +FT+ +G +V+ ++ +E
Sbjct: 14 GPSPLP-VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 55 DKALASRPRRMAMEIL--GYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRES 112
+A + R + ++ + GY + G WR R+ + L + K E
Sbjct: 73 AEAFSGRGKIAVVDPIFQGYGVIFA----NGERWRALRRFS---LATMRDFGMGKRSVEE 125
Query: 113 EVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGT-----DLH 167
+ + L ++ + S + + T +II I+ GKR+ ++ DL
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTL--LFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 168 EHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSE 227
+ S + F V FL++ G + + + +E + + Q +++H R + +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIYRNLQEINTFIGQSVEKH---RATLD 238
Query: 228 VEGDEDFIYVMLSLLYDNAKQLPDSD 253
DFI V L L + K P S+
Sbjct: 239 PSNPRDFIDVYL-LRMEKDKSDPSSE 263
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 38/248 (15%)
Query: 21 MANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEIL--GYNFLATP 78
+ KYG +FT+ +G +V+ ++ +E +A + R + ++ + GY +
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA- 97
Query: 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMK 138
G WR R+ + L + K E + + L ++ + S + +
Sbjct: 98 ---NGERWRALRRFS---LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL- 150
Query: 139 HWLEGTTFDIIIRIIEGKRYTSQEGTDLH-------------EHAASFFTLFGKFVVSDA 185
T +II I+ GKR+ ++ L ++ F LF F+
Sbjct: 151 -LFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKH-- 207
Query: 186 LPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVMLSLLYDN 245
G + + + +E + + Q +++H R + + DFI V L L +
Sbjct: 208 --------FPGTHRQIYRNLQEINTFIGQSVEKH---RATLDPSNPRDFIDVYL-LRMEK 255
Query: 246 AKQLPDSD 253
K P S+
Sbjct: 256 DKSDPSSE 263
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASR 61
E + L ++ +YGP+FT+ +G R +V+ + KE + + R
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGR 79
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAME--I 69
E + L ++ +YGP+FT+ +G R +V+ + +E + + R + +
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89
Query: 70 LGYNFLATPSSPYGSYWRETRK--IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQN 127
GY + + G ++ R+ IAT+ + + ++E G D
Sbjct: 90 KGYGVVFS----NGERAKQLRRFSIATLRDFGVGKRGIEERIQEE------AGFLIDALR 139
Query: 128 SATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158
TG +++ +L T ++I I+ G R+
Sbjct: 140 -GTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAME--I 69
E + L ++ +YGP+FT+ +G R +V+ + +E + + R + +
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89
Query: 70 LGYNFLATPSSPYGSYWRETRK--IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQN 127
GY + + G ++ R+ IAT+ + + ++E G D
Sbjct: 90 KGYGVVFS----NGERAKQLRRFSIATLRDFGVGKRGIEERIQEE------AGFLIDALR 139
Query: 128 SATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158
TG +++ +L T ++I I+ G R+
Sbjct: 140 -GTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAME--I 69
E + L ++ +YGP+FT+ +G R +V+ + +E + + R + +
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89
Query: 70 LGYNFLATPSSPYGSYWRETRK--IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQN 127
GY + + G ++ R+ IAT+ + + ++E G D
Sbjct: 90 KGYGVVFS----NGERAKQLRRFSIATLRDFGVGKRGIEERIQEE------AGFLIDALR 139
Query: 128 SATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158
TG +++ +L T ++I I+ G R+
Sbjct: 140 -GTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAME--I 69
E + L ++ +YGP+FT+ +G R +V+ + +E + + R + +
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89
Query: 70 LGYNFLATPSSPYGSYWRETRK--IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQN 127
GY + + G ++ R+ IAT+ + + ++E G D
Sbjct: 90 KGYGVVFS----NGERAKQLRRFSIATLRDFGVGKRGIEERIQEE------AGFLIDALR 139
Query: 128 SATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158
TG +++ +L T ++I I+ G R+
Sbjct: 140 -GTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAME--I 69
E + L ++ +YGP+FT+ +G R +V+ + +E + + R + +
Sbjct: 30 EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89
Query: 70 LGYNFLATPSSPYGSYWRETRK--IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQN 127
GY + + G ++ R+ IAT+ + + ++E G D
Sbjct: 90 KGYGVVFS----NGERAKQLRRFSIATLRDFGVGKRGIEERIQEE------AGFLIDALR 139
Query: 128 SATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158
TG +++ +L T ++I I+ G R+
Sbjct: 140 -GTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASR 61
+GH+ FG +P +L KYG IFTM + NR VV + + FT ++ L+ R
Sbjct: 15 VGHIIQFGK-DPLGFML-KAKKKYGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPR 72
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 21 MANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASR---PRRMAMEILGYNFLAT 77
+A ++GP+FT+ +G R +V+ + KE + R P A G F
Sbjct: 39 LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNG 98
Query: 78 PSSPYGSYWRETRKIATVEL 97
P+ W++ R+ + L
Sbjct: 99 PT------WKDIRRFSLTTL 112
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 18 LGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77
L + YGP+FT+ +G+ +V+ E KE + A R +E +
Sbjct: 36 LTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVSKGLGIA 95
Query: 78 PSSPYGSYWRETRKIATVEL 97
S+ W+E R+ + + L
Sbjct: 96 FSN--AKTWKEMRRFSLMTL 113
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 24 KYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEIL--GYNFLATPSSP 81
KYG +FT+ +G +++ E +E +A + R + ++ GY +
Sbjct: 42 KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFA---- 97
Query: 82 YGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWL 141
G+ W+ R+ + + K E + + L ++ + S +
Sbjct: 98 NGNRWKVLRRFSVTTMRD---FGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTF--LF 152
Query: 142 EGTTFDIIIRIIEGKRYTSQE 162
+ T +II I+ GKR+ Q+
Sbjct: 153 QSITANIICSIVFGKRFHYQD 173
>pdb|3VM8|A Chain A, Crystal Structure Of The Human Apobec3c Having Hiv-1
Vif-Binding Interface
pdb|3VM8|B Chain B, Crystal Structure Of The Human Apobec3c Having Hiv-1
Vif-Binding Interface
pdb|3VOW|A Chain A, Crystal Structure Of The Human Apobec3c Having Hiv-1
Vif-Binding Interface
pdb|3VOW|B Chain B, Crystal Structure Of The Human Apobec3c Having Hiv-1
Vif-Binding Interface
Length = 190
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 154 EGKRYTSQEGTDLH-EHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKE 207
EG R SQEG + F + FV +D PF W + N +L+K+ +E
Sbjct: 133 EGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRRLRE 187
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 32/193 (16%)
Query: 9 GGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAM- 67
GG + H L KYG IF MK+G ++ + + + + + T ++ P+R+ +
Sbjct: 45 GGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE----SAHPQRLEIK 100
Query: 68 ----------EILGYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTAS 117
E G L G W+ R +L+ + KL +
Sbjct: 101 PWKAYRDHRNEAYGLMILE------GQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADF 154
Query: 118 IKGLFKDC-QNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY------TSQEGTDLHEHA 170
++ + + C + + E+ W +F+ I ++ KR+ T +E
Sbjct: 155 LERMDELCDERGRIPDLYSELNKW----SFESICLVLYEKRFGLLQKETEEEALTFITAI 210
Query: 171 ASFFTLFGKFVVS 183
+ + FGK +V+
Sbjct: 211 KTMMSTFGKMMVT 223
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 13/149 (8%)
Query: 23 NKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEI-LGYNFLATPSSP 81
KYGPI+ K+G ++ + + E F K S P R + L Y+ P
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDVAHLF----KFEGSYPERYDIPPWLAYHRYY--QKP 98
Query: 82 YG------SYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSV 135
G W++ R + E+++ ++ + + L K + +GK
Sbjct: 99 IGVLFKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVG 158
Query: 136 EMKHWLEGTTFDIIIRIIEGKRYTSQEGT 164
++K L F+ I ++ G+R E T
Sbjct: 159 DIKEDLFHFAFESITNVMFGERLGMLEET 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,896,793
Number of Sequences: 62578
Number of extensions: 310689
Number of successful extensions: 731
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 37
length of query: 263
length of database: 14,973,337
effective HSP length: 97
effective length of query: 166
effective length of database: 8,903,271
effective search space: 1477942986
effective search space used: 1477942986
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)