Query 041575
Match_columns 263
No_of_seqs 200 out of 1158
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 08:33:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041575hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.4E-35 7.4E-40 236.9 24.6 250 1-262 36-291 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-30 2.4E-35 216.5 23.9 254 1-262 44-302 (517)
3 PLN00110 flavonoid 3',5'-hydro 100.0 8.8E-30 1.9E-34 210.1 24.3 251 1-262 41-294 (504)
4 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-29 2.7E-34 211.1 25.1 255 1-262 67-332 (543)
5 PLN02655 ent-kaurene oxidase 100.0 1.9E-29 4.2E-34 206.7 25.0 249 1-262 9-267 (466)
6 PLN02183 ferulate 5-hydroxylas 100.0 6.6E-29 1.4E-33 205.9 23.2 251 1-262 46-309 (516)
7 PLN03112 cytochrome P450 famil 100.0 7.4E-29 1.6E-33 205.8 23.1 253 1-262 42-301 (514)
8 PLN03234 cytochrome P450 83B1; 100.0 1.2E-28 2.6E-33 204.0 23.8 253 1-262 38-293 (499)
9 PLN02966 cytochrome P450 83A1 100.0 1.3E-27 2.8E-32 197.7 23.1 252 1-262 39-294 (502)
10 PLN02290 cytokinin trans-hydro 100.0 9.7E-28 2.1E-32 199.3 21.7 237 16-262 84-321 (516)
11 PLN00168 Cytochrome P450; Prov 100.0 2.8E-27 6E-32 196.4 24.2 255 1-262 45-311 (519)
12 PLN02738 carotene beta-ring hy 100.0 2.2E-27 4.7E-32 199.1 22.5 242 2-262 142-396 (633)
13 PTZ00404 cytochrome P450; Prov 100.0 2.2E-27 4.8E-32 195.7 19.9 229 1-242 39-273 (482)
14 PF00067 p450: Cytochrome P450 100.0 2.1E-27 4.6E-32 195.0 18.5 250 1-262 9-267 (463)
15 PLN02394 trans-cinnamate 4-mon 100.0 3.3E-26 7.1E-31 189.7 23.8 251 1-262 40-298 (503)
16 PLN03018 homomethionine N-hydr 100.0 6.2E-26 1.3E-30 188.0 24.1 253 1-262 50-319 (534)
17 KOG0158 Cytochrome P450 CYP3/C 99.9 4.2E-26 9.2E-31 182.4 17.6 249 1-263 41-300 (499)
18 PLN02936 epsilon-ring hydroxyl 99.9 4E-25 8.8E-30 182.1 21.1 234 12-262 36-283 (489)
19 KOG0159 Cytochrome P450 CYP11/ 99.9 3.6E-24 7.7E-29 168.5 21.6 208 12-226 73-292 (519)
20 PLN02500 cytochrome P450 90B1 99.9 1.6E-24 3.5E-29 178.9 20.4 232 1-262 48-284 (490)
21 PLN03141 3-epi-6-deoxocathaste 99.9 6.2E-24 1.3E-28 173.7 20.3 233 1-262 17-256 (452)
22 KOG0157 Cytochrome P450 CYP4/C 99.9 3.3E-24 7.1E-29 176.1 18.5 242 1-262 45-296 (497)
23 PLN02196 abscisic acid 8'-hydr 99.9 5.8E-24 1.3E-28 174.3 19.7 224 1-262 45-269 (463)
24 PLN02302 ent-kaurenoic acid ox 99.9 2E-23 4.4E-28 172.8 22.7 235 1-262 52-292 (490)
25 PLN02169 fatty acid (omega-1)- 99.9 2.5E-23 5.4E-28 171.7 20.7 248 1-262 41-306 (500)
26 PLN03195 fatty acid omega-hydr 99.9 3.7E-23 8E-28 171.9 20.9 243 1-262 40-297 (516)
27 PLN02774 brassinosteroid-6-oxi 99.9 1.8E-23 3.9E-28 171.4 18.7 228 1-262 41-269 (463)
28 PLN02987 Cytochrome P450, fami 99.9 2.7E-22 6E-27 164.2 19.6 229 1-262 40-272 (472)
29 PLN02426 cytochrome P450, fami 99.9 6.5E-20 1.4E-24 151.4 21.5 216 12-242 60-288 (502)
30 COG2124 CypX Cytochrome P450 [ 99.7 2.4E-16 5.2E-21 127.1 16.6 209 16-262 26-241 (411)
31 PLN02648 allene oxide synthase 99.7 1.1E-17 2.4E-22 136.6 7.4 153 1-160 27-194 (480)
32 KOG0684 Cytochrome P450 [Secon 99.7 1.2E-15 2.6E-20 118.3 16.3 234 1-262 42-278 (486)
33 PF13893 RRM_5: RNA recognitio 70.1 16 0.00034 20.0 4.4 34 19-52 2-39 (56)
34 PLN03120 nucleic acid binding 62.7 42 0.0009 25.7 6.3 51 13-63 16-72 (260)
35 TIGR01661 ELAV_HUD_SF ELAV/HuD 61.6 23 0.00051 28.3 5.4 49 14-62 282-340 (352)
36 PLN03134 glycine-rich RNA-bind 58.8 40 0.00087 23.1 5.4 40 14-53 47-95 (144)
37 PF00076 RRM_1: RNA recognitio 57.3 33 0.00072 19.3 5.1 48 2-53 3-58 (70)
38 PF13625 Helicase_C_3: Helicas 57.2 35 0.00075 22.9 4.8 40 12-53 74-113 (129)
39 KOG0107 Alternative splicing f 55.8 26 0.00055 24.9 3.9 46 2-51 15-64 (195)
40 KOG0114 Predicted RNA-binding 53.5 59 0.0013 21.0 5.1 39 15-53 32-76 (124)
41 PRK10597 DNA damage-inducible 52.8 48 0.001 20.2 4.3 37 16-52 24-68 (81)
42 smart00362 RRM_2 RNA recogniti 52.3 40 0.00086 18.7 5.4 40 14-53 12-58 (72)
43 COG3657 Uncharacterized protei 47.3 16 0.00036 22.8 1.8 31 2-35 37-67 (100)
44 KOG0109 RNA-binding protein LA 44.8 42 0.00091 26.0 3.9 48 1-52 6-54 (346)
45 PF14259 RRM_6: RNA recognitio 39.7 67 0.0014 18.2 3.7 40 15-54 12-59 (70)
46 KOG0149 Predicted RNA-binding 38.2 1.4E+02 0.0031 22.5 5.6 45 13-57 24-77 (247)
47 PF09926 DUF2158: Uncharacteri 36.7 40 0.00086 18.6 2.1 18 25-42 3-20 (53)
48 smart00360 RRM RNA recognition 36.6 75 0.0016 17.4 4.3 39 14-52 9-56 (71)
49 TIGR01659 sex-lethal sex-letha 36.6 1.1E+02 0.0023 24.9 5.3 40 14-53 206-254 (346)
50 COG1707 ACT domain-containing 34.4 52 0.0011 23.2 2.8 38 12-49 154-196 (218)
51 COG5329 Phosphoinositide polyp 31.4 52 0.0011 28.3 2.9 26 13-38 294-319 (570)
52 TIGR01659 sex-lethal sex-letha 31.1 1.7E+02 0.0036 23.8 5.6 40 14-53 120-168 (346)
53 TIGR01661 ELAV_HUD_SF ELAV/HuD 30.7 1.4E+02 0.003 23.9 5.3 48 2-53 8-64 (352)
54 PF14198 TnpV: Transposon-enco 30.0 1.6E+02 0.0035 19.2 5.5 60 85-144 33-95 (111)
55 PF14605 Nup35_RRM_2: Nup53/35 29.6 1E+02 0.0022 16.8 4.7 37 13-49 12-51 (53)
56 KOG4128 Bleomycin hydrolases a 28.2 2.9E+02 0.0064 22.2 6.1 78 81-159 143-230 (457)
57 COG4471 Uncharacterized protei 27.4 1.6E+02 0.0035 18.3 4.2 35 19-53 19-53 (90)
58 KOG0105 Alternative splicing f 25.6 1.1E+02 0.0023 22.2 3.2 47 2-52 11-63 (241)
59 COG1610 Uncharacterized conser 25.5 75 0.0016 21.8 2.3 12 251-262 93-104 (148)
60 TIGR01642 U2AF_lg U2 snRNP aux 25.1 2.1E+02 0.0046 24.4 5.7 47 16-62 434-493 (509)
61 TIGR01649 hnRNP-L_PTB hnRNP-L/ 24.6 2.4E+02 0.0052 24.0 5.8 39 15-53 290-332 (481)
62 TIGR01622 SF-CC1 splicing fact 23.9 2.4E+02 0.0052 23.7 5.7 47 16-62 387-439 (457)
63 TIGR01622 SF-CC1 splicing fact 23.1 2.9E+02 0.0063 23.2 6.0 47 15-61 103-158 (457)
64 PRK02302 hypothetical protein; 22.8 2E+02 0.0044 17.9 4.2 32 22-53 23-54 (89)
65 KOG3718 Carnitine O-acyltransf 22.7 2.7E+02 0.0059 23.7 5.3 68 28-106 200-267 (609)
66 KOG4241 Mitochondrial ribosoma 22.6 77 0.0017 23.2 2.1 29 25-53 136-164 (245)
67 TIGR01648 hnRNP-R-Q heterogene 22.0 2.9E+02 0.0062 24.4 5.7 40 14-53 71-118 (578)
68 COG1843 FlgD Flagellar hook ca 21.1 70 0.0015 24.0 1.7 30 231-262 31-60 (222)
69 TIGR01645 half-pint poly-U bin 20.9 3.2E+02 0.007 24.3 5.8 40 14-53 120-168 (612)
70 PF01707 Peptidase_C9: Peptida 20.7 89 0.0019 22.6 2.1 22 139-160 83-104 (202)
71 PF11616 EZH2_WD-Binding: WD r 20.6 54 0.0012 15.5 0.7 8 83-90 19-26 (30)
72 TIGR01628 PABP-1234 polyadenyl 20.4 2.9E+02 0.0063 24.1 5.6 48 2-53 5-61 (562)
73 COG5475 Uncharacterized small 20.2 1.2E+02 0.0027 16.8 2.1 17 25-41 7-23 (60)
74 cd01403 Cyt_c_Oxidase_VIIb Cyt 20.2 71 0.0015 17.2 1.1 12 20-31 4-15 (51)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-35 Score=236.92 Aligned_cols=250 Identities=36% Similarity=0.618 Sum_probs=209.1
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcc-hhhhhhhhcCcccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPR-RMAMEILGYNFLATPS 79 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (263)
||||++++.. ..+|..+.+|.++|||++.+++|+.++|||+|+++++|++++++..|++||. ......+..++.++++
T Consensus 36 iIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~ 114 (489)
T KOG0156|consen 36 IIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVF 114 (489)
T ss_pred ccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEe
Confidence 6899999984 2599999999999999999999999999999999999999999999999997 2344667656679999
Q ss_pred CCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 80 SPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 80 ~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
+.+|+.||.+||++...+|+...++.......++++.+++.+.+ ...+ .+||+...+..++.+||++++||.++.
T Consensus 115 a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~----~~~~-~~vdl~~~l~~~~~nvI~~~~fG~rf~ 189 (489)
T KOG0156|consen 115 APYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK----SKKG-EPVDLSELLDLLVGNVICRMLFGRRFE 189 (489)
T ss_pred CCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh----cCCC-ceeeHHHHHHHHHHHHHHHHHhCCccc
Confidence 98899999999999999999999998888889999999999974 1222 689999999999999999999999998
Q ss_pred CCcc---hHHHHHHHHHHHhhhccccccccc-cccccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcH
Q 041575 160 SQEG---TDLHEHAASFFTLFGKFVVSDALP-FLRWLD-IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDF 234 (263)
Q Consensus 160 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 234 (263)
..+. .++.+.+....+..+.+.+.+++| ++++++ ..+..+.......++..++++.|++++++. .. ++++||
T Consensus 190 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~--~~~~D~ 266 (489)
T KOG0156|consen 190 EEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD--EEGRDF 266 (489)
T ss_pred cCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc--CCCCcH
Confidence 7322 447778888888888888888999 677776 335566677777779999999999998876 22 233799
Q ss_pred HHHHHhccccccccCCCCCchhhhhhhc
Q 041575 235 IYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 235 l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+|.||...++++. +.+++++|++.|
T Consensus 267 vD~lL~~~~~~~~---~~~t~~~i~~~~ 291 (489)
T KOG0156|consen 267 VDALLKLMKEEKA---EGLTDDHLKALI 291 (489)
T ss_pred HHHHHHhhccccc---CCCCHHHHHHHH
Confidence 9999998765421 129999999876
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=1.1e-30 Score=216.47 Aligned_cols=254 Identities=29% Similarity=0.539 Sum_probs=188.5
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++. .+++..+.+|+++|||+|++++|+.++|+++||+++++++.++...|.+++.......++....+++++
T Consensus 44 ~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~ 121 (517)
T PLN02687 44 VLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFA 121 (517)
T ss_pred ccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeC
Confidence 579988876 568999999999999999999999999999999999999988777888877544333343222355666
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
.+|+.|+++||++++++|+.++++.+.+.+.+++.++++.|.+. ..+.++|+.+++..+++|+|+.++||.++..
T Consensus 122 ~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~ 196 (517)
T PLN02687 122 PYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-----HGTAPVNLGQLVNVCTTNALGRAMVGRRVFA 196 (517)
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-----cCCCceeHHHHHHHHHHHHHHHHHhCccccc
Confidence 56999999999998337999999999999999999999999742 1335799999999999999999999998753
Q ss_pred -Cc---chHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHH
Q 041575 161 -QE---GTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIY 236 (263)
Q Consensus 161 -~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~ 236 (263)
+. ...+.+.+..+....+......++|++.|++..+..++..+..+.+.+++.++|+++++....+. ...+|+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~ 275 (517)
T PLN02687 197 GDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGS-EEHKDLLS 275 (517)
T ss_pred cCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-cccccHHH
Confidence 11 23455555555444332223345676666653333455666778888999999998876543221 23469999
Q ss_pred HHHhcccccc-ccCCCCCchhhhhhhc
Q 041575 237 VMLSLLYDNA-KQLPDSDADTVIKALC 262 (263)
Q Consensus 237 ~ll~~~~~~~-~~~~~~l~~~~i~~~~ 262 (263)
.|+++..+.. ...+..+++++|.+++
T Consensus 276 ~ll~~~~~~~~~~~~~~l~~~~i~~~~ 302 (517)
T PLN02687 276 TLLALKREQQADGEGGRITDTEIKALL 302 (517)
T ss_pred HHHHhhccccccccccCCCHHHHHHHH
Confidence 9998754321 0123469999998775
No 3
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.97 E-value=8.8e-30 Score=210.15 Aligned_cols=251 Identities=27% Similarity=0.465 Sum_probs=184.6
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++.+. ..++..+.+|+++||||+++++|+.++|+++||+++++++.++...|.+++..........+..+.+++
T Consensus 41 l~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~ 118 (504)
T PLN00110 41 LLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFA 118 (504)
T ss_pred eeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeC
Confidence 579988776 568999999999999999999999999999999999999988777888887543222111121234555
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC-
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT- 159 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~- 159 (263)
.+|+.|+++|+++++.+|+.++++.+.+.+.+++..+++.+.+.. ..++++|+.+++..+++|+|+.++||.++.
T Consensus 119 ~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~----~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~ 194 (504)
T PLN00110 119 DYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELS----QRGEPVVVPEMLTFSMANMIGQVILSRRVFE 194 (504)
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhc----cCCCcEeHHHHHHHHHHHHHHHHHhCCcccc
Confidence 569999999999997679999999999999999999999987532 235589999999999999999999999862
Q ss_pred CC--cchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHH
Q 041575 160 SQ--EGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYV 237 (263)
Q Consensus 160 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ 237 (263)
.. +..++...+...........+..++|++.|++..+..+...+..+.+.+++.+.++++++..... ....|+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~ 272 (504)
T PLN00110 195 TKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER--KGNPDFLDV 272 (504)
T ss_pred cCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--ccCCChhhH
Confidence 21 22445566555554433332345667666655333345566667788888888888877643321 123699999
Q ss_pred HHhccccccccCCCCCchhhhhhhc
Q 041575 238 MLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 238 ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
++++.... .+..+++++|.++|
T Consensus 273 ll~~~~~~---~~~~l~~~~i~~~~ 294 (504)
T PLN00110 273 VMANQENS---TGEKLTLTNIKALL 294 (504)
T ss_pred Hhhccccc---CCCCCCHHHHHHHH
Confidence 99764322 14569999998775
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=99.97 E-value=1.2e-29 Score=211.05 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=180.8
Q ss_pred CcccccccCCCCchhHHHHHHHhhcC-CeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYG-PIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPS 79 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (263)
++||++++......+..+.+|.++|| +|+++++|+.++|+|+||+++++++.++...|.+||.......++.+..++++
T Consensus 67 iiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~ 146 (543)
T PLN02971 67 IVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVI 146 (543)
T ss_pred cccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEe
Confidence 58999887521234778999999999 89999999999999999999999999888889888864444444433223456
Q ss_pred CCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 80 SPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 80 ~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
..+|+.|+++||++.+.+|++..++.+.+.+.++++.+++.+.+.+ ..++++|+.+.+.++++++|++++||.++.
T Consensus 147 ~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~ 222 (543)
T PLN02971 147 TPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMV----KNSEPVDLRFVTRHYCGNAIKRLMFGTRTF 222 (543)
T ss_pred cCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCceehHHHHHHHHHHHHHHHHhCCccc
Confidence 6679999999999987677777777888889888989988876422 234579999999999999999999999873
Q ss_pred CC-----cc--hHHHHHHHHHHHhhhc---ccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Q 041575 160 SQ-----EG--TDLHEHAASFFTLFGK---FVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVE 229 (263)
Q Consensus 160 ~~-----~~--~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 229 (263)
.. ++ .+..+.+..++..... .....++|+++++++.+..+......+.+.+++.+.|+++++....+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 302 (543)
T PLN02971 223 SEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRT 302 (543)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 31 11 1223334444332211 12335567666654323344556667778899999998887644322211
Q ss_pred CCCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 230 GDEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 230 ~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
...|+++.|++..+++ +...+++++|.++|
T Consensus 303 ~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~ 332 (543)
T PLN02971 303 QIEDFLDIFISIKDEA---GQPLLTADEIKPTI 332 (543)
T ss_pred CCcCHHHHHHhhhccc---CCCCCCHHHHHHhH
Confidence 2469999999864332 11249999998876
No 5
>PLN02655 ent-kaurene oxidase
Probab=99.97 E-value=1.9e-29 Score=206.71 Aligned_cols=249 Identities=18% Similarity=0.315 Sum_probs=180.2
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++.. .+++..+.+|+++|||+|++++|+.++|+|+||+++++|+.++...|.+++.......++++...+++.
T Consensus 9 ~iG~l~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~ 87 (466)
T PLN02655 9 VIGNLLQLKE-KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATS 87 (466)
T ss_pred ccccHHHcCC-CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeC
Confidence 5899988863 568999999999999999999999999999999999999998888888877543334343333235555
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
++|+.|+++|+.+.+++|+...++.+.+.+.+.++.+++.+.+.+.. ..++++|+.+.+..+|+|+++.++||.+++.
T Consensus 88 ~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~ 165 (466)
T PLN02655 88 DYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKD--DPHSPVNFRDVFENELFGLSLIQALGEDVES 165 (466)
T ss_pred CCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccc--cCCCceeHHHHHHHHHHHHHHHHHhcccccc
Confidence 56999999998887768888888999999999999999998754421 2345799999999999999999999998765
Q ss_pred CcchH----------HHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Q 041575 161 QEGTD----------LHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEG 230 (263)
Q Consensus 161 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 230 (263)
....+ +...+..+........+..++|+++++|...+.+........+.++++.++++++++...+. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 243 (466)
T PLN02655 166 VYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIARGE--E 243 (466)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--C
Confidence 21111 22222333333222223456787777763223333444445566888888888876644332 2
Q ss_pred CCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 231 DEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 231 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+.|+++.|++.. ..+++++|.+++
T Consensus 244 ~~d~l~~ll~~~--------~~ls~~~i~~~~ 267 (466)
T PLN02655 244 RDCYLDFLLSEA--------THLTDEQLMMLV 267 (466)
T ss_pred cccHHHHHHhcc--------CCCCHHHHHHHH
Confidence 368999999753 258899988765
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=99.97 E-value=6.6e-29 Score=205.91 Aligned_cols=251 Identities=28% Similarity=0.473 Sum_probs=180.0
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++. ...+..+.+|+++|||+|++++|+.++|+++||+++++|+.++...|..++..........+..+.+++
T Consensus 46 l~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~ 123 (516)
T PLN02183 46 IIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFA 123 (516)
T ss_pred eeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeC
Confidence 578887775 456788999999999999999999999999999999999988777787777543222232221234555
Q ss_pred CCChhHHHHHhHH-HhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 81 PYGSYWRETRKIA-TVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 81 ~~g~~w~~~Rk~~-~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
.+|+.|+++|+++ .+ +|+.++++.+.+.+ ++++.+++.|.+ ..++++|+.+++..+++|+|+.++||.+++
T Consensus 124 ~~g~~w~~~Rr~~~~~-~f~~~~l~~~~~~~-~~~~~~~~~l~~------~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~ 195 (516)
T PLN02183 124 HYGPFWRQMRKLCVMK-LFSRKRAESWASVR-DEVDSMVRSVSS------NIGKPVNIGELIFTLTRNITYRAAFGSSSN 195 (516)
T ss_pred CCChHHHHHHHHHHHH-hcCHHHHHHHHHHH-HHHHHHHHHHHh------cCCCcEeHHHHHHHHHHHHHHhHhhcCccc
Confidence 5699999999995 55 79999999888864 688999999862 234589999999999999999999998775
Q ss_pred CCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CCCCCCcH
Q 041575 160 SQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSS-----EVEGDEDF 234 (263)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~d~ 234 (263)
. ..+++.+.+..+...+.......++|++.+++.....+++.+..+.+.+++.+.|++++++.... .....+|+
T Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~ 274 (516)
T PLN02183 196 E-GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDM 274 (516)
T ss_pred c-hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccH
Confidence 4 33456666665555444333445667766653222345666777888889988888876543221 01123699
Q ss_pred HHHHHhcccccc-----c--cCCCCCchhhhhhhc
Q 041575 235 IYVMLSLLYDNA-----K--QLPDSDADTVIKALC 262 (263)
Q Consensus 235 l~~ll~~~~~~~-----~--~~~~~l~~~~i~~~~ 262 (263)
++.++++..+.. + ..+..+++++|.+++
T Consensus 275 l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 309 (516)
T PLN02183 275 VDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAII 309 (516)
T ss_pred HHHHHHhhhccccccccccccccCCCCHHHHHHHH
Confidence 999998643321 0 112369999988764
No 7
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.97 E-value=7.4e-29 Score=205.82 Aligned_cols=253 Identities=30% Similarity=0.505 Sum_probs=182.0
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++. .+++..+.+|+++|||++++++|+.+.|+++||+++++|+.++...|.+++..........+..+.++.
T Consensus 42 l~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~ 119 (514)
T PLN03112 42 IVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALA 119 (514)
T ss_pred eeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeC
Confidence 578988876 678999999999999999999999999999999999999988877888777542221111111133445
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
.+|+.|+.+|+++.+++|+..+++.+.+.+.++++.+++.+.+.. ..++++|+.+.+..+++++|+.++||.++..
T Consensus 120 ~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~----~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~ 195 (514)
T PLN03112 120 PLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAA----QTGKPVNLREVLGAFSMNNVTRMLLGKQYFG 195 (514)
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhh----ccCCeeeHHHHHHHHHHHHHHHHHcCCcccc
Confidence 569999999999764479999999999999999999999876422 2345799999999999999999999998743
Q ss_pred Cc------chHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCc
Q 041575 161 QE------GTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSE-VEGDED 233 (263)
Q Consensus 161 ~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d 233 (263)
.. ..++...+..+...........++|++.+++..+..++..+..+.+.++++..++++++...... .....|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 275 (514)
T PLN03112 196 AESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMD 275 (514)
T ss_pred ccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccch
Confidence 11 12344444444333222223345676666542233456667778889999999998876543221 123369
Q ss_pred HHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 234 FIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 234 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+++.++++..++ ++..+++++|.+++
T Consensus 276 ~l~~ll~~~~~~---~~~~l~~~~i~~~~ 301 (514)
T PLN03112 276 FVDVLLSLPGEN---GKEHMDDVEIKALM 301 (514)
T ss_pred HHHHHHHhhccc---cccCCCHHHHHHHH
Confidence 999999865332 12358999998765
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.97 E-value=1.2e-28 Score=204.01 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=182.2
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++.. .+++.++.+|+++|||++++++|+.++|+++||+++++|+.++...|..++...........+..+.+.
T Consensus 38 ~iG~~~~~~~-~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~ 116 (499)
T PLN03234 38 IIGNLHQMEK-FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFG 116 (499)
T ss_pred eeccHHhcCC-CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccC
Confidence 5799888753 368889999999999999999999999999999999999988777888887543222222211233445
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
.+++.|+++|+.+..++|+++++..+.+.+.++++++++.|.+.+ .+++++|+.+.+..+++|+|+.++||.+++.
T Consensus 117 ~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~----~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~ 192 (499)
T PLN03234 117 QYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAA----DQSGTVDLSELLLSFTNCVVCRQAFGKRYNE 192 (499)
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhc----cCCCeEEHHHHHHHHHHHHHHHHHhCCcccc
Confidence 568999999998643489999999999999999999999997432 2345799999999999999999999998865
Q ss_pred Cc--chHHHHHHHHHHHhhhccccccccccccccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHH
Q 041575 161 QE--GTDLHEHAASFFTLFGKFVVSDALPFLRWLD-IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYV 237 (263)
Q Consensus 161 ~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ 237 (263)
.+ ..++.+.+.......+.......+|++.+++ +.+..+++.++.+.+.+++.++|+++++....+ ..++|+++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~ 270 (499)
T PLN03234 193 YGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK--QETESFIDL 270 (499)
T ss_pred cchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--CCcccHHHH
Confidence 22 1334444443333322222334456544433 223345677888899999999999876543222 134799999
Q ss_pred HHhccccccccCCCCCchhhhhhhc
Q 041575 238 MLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 238 ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
|++...++ ..+..+++++|.+++
T Consensus 271 l~~~~~~~--~~~~~~~~~~i~~~~ 293 (499)
T PLN03234 271 LMQIYKDQ--PFSIKFTHENVKAMI 293 (499)
T ss_pred HHHHhhcc--CcCCCCCHHHHHHHH
Confidence 99765332 113469999998875
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.96 E-value=1.3e-27 Score=197.72 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=172.4
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++.. .+++..+.+|+++||++|++++|+.++|+++||+++++|+.++...|.+++..........+..++.+.
T Consensus 39 ~~G~l~~l~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (502)
T PLN02966 39 VIGNLLQLQK-LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALN 117 (502)
T ss_pred eeccHHhcCC-CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeC
Confidence 5789887742 468999999999999999999999999999999999999987766676665432222222222234344
Q ss_pred CCChhHHHHHhH-HHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 81 PYGSYWRETRKI-ATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 81 ~~g~~w~~~Rk~-~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
.+|+.|+.+|++ +.+ +|+..++..+.+.+.++++++++.|.+.+ .+++++|+.+++..+|+|+|+.++||.+++
T Consensus 118 ~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~ 192 (502)
T PLN02966 118 HYTPYYREIRKMGMNH-LFSPTRVATFKHVREEEARRMMDKINKAA----DKSEVVDISELMLTFTNSVVCRQAFGKKYN 192 (502)
T ss_pred CCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCceeHHHHHHHHHHHHHHHHHhCCccC
Confidence 459999999999 665 79999999999999999999999997532 234579999999999999999999999986
Q ss_pred CCcc--hHHHHHHHHHHHhhhccccccccccccccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHH
Q 041575 160 SQEG--TDLHEHAASFFTLFGKFVVSDALPFLRWLD-IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIY 236 (263)
Q Consensus 160 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~ 236 (263)
..+. .++.+.+..............++|++.+++ +.++.+......+.+.+++.+.++++.+..... ....|+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~ 270 (502)
T PLN02966 193 EDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK--PETESMID 270 (502)
T ss_pred ccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cccccHHH
Confidence 5221 223333333232322222334456443332 122223334455667777777777665432111 12368999
Q ss_pred HHHhccccccccCCCCCchhhhhhhc
Q 041575 237 VMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 237 ~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
.|+++.++. ..+..+++++|.++|
T Consensus 271 ~l~~~~~~~--~~~~~l~~~~i~~~~ 294 (502)
T PLN02966 271 LLMEIYKEQ--PFASEFTVDNVKAVI 294 (502)
T ss_pred HHHHHHhcc--CcCCCCCHHHHHHHH
Confidence 999765432 113468999998764
No 10
>PLN02290 cytokinin trans-hydroxylase
Probab=99.96 E-value=9.7e-28 Score=199.28 Aligned_cols=237 Identities=16% Similarity=0.184 Sum_probs=165.4
Q ss_pred HHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccCCCChhHHHHHhHHHh
Q 041575 16 RILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSSPYGSYWRETRKIATV 95 (263)
Q Consensus 16 ~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~ 95 (263)
..+.+|+++|||++++++|+.+.|+++||+++++++.++ ..+..++...........+.++++++ |+.|+++||++++
T Consensus 84 ~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~-g~~Wk~~Rk~~~~ 161 (516)
T PLN02290 84 PHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMAN-GADWYHQRHIAAP 161 (516)
T ss_pred hHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCccccC-chHHHHHHhhccc
Confidence 457889999999999999999999999999999999765 34545553211111111113666664 9999999999997
Q ss_pred hcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCCCcchHHHHHHHHHHH
Q 041575 96 ELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGTDLHEHAASFFT 175 (263)
Q Consensus 96 ~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 175 (263)
.|+..+++.+.+.+.++++++++.|.+.+ ..++.++|+.+++..+++|+|+.++||.++.. .+++...+..+..
T Consensus 162 -~f~~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~ 235 (516)
T PLN02290 162 -AFMGDRLKGYAGHMVECTKQMLQSLQKAV---ESGQTEVEIGEYMTRLTADIISRTEFDSSYEK--GKQIFHLLTVLQR 235 (516)
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCceEEhHHHHHHHHHHHHHHHHcCCcccc--chHHHHHHHHHHH
Confidence 79999999999999999999999997532 12234799999999999999999999998753 2334444444333
Q ss_pred hhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCcHHHHHHhccccccccCCCCCc
Q 041575 176 LFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSE-VEGDEDFIYVMLSLLYDNAKQLPDSDA 254 (263)
Q Consensus 176 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~l~ 254 (263)
..........+|++.++| .+..+.+....+.+.+++.+.|+++++....+. ....+|+++.++++..+.. ..+..++
T Consensus 236 ~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~~~l~ 313 (516)
T PLN02290 236 LCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKR-SNGFNLN 313 (516)
T ss_pred HHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccC-CCCCCCC
Confidence 322111112345555565 233455666778899999999998876543321 1134699999998654321 1134588
Q ss_pred hhhhhhhc
Q 041575 255 DTVIKALC 262 (263)
Q Consensus 255 ~~~i~~~~ 262 (263)
+++|.+++
T Consensus 314 ~~~i~~~~ 321 (516)
T PLN02290 314 LQLIMDEC 321 (516)
T ss_pred HHHHHHHH
Confidence 88887664
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=99.96 E-value=2.8e-27 Score=196.40 Aligned_cols=255 Identities=15% Similarity=0.270 Sum_probs=176.5
Q ss_pred CcccccccC-CCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcccccc
Q 041575 1 MIGHLHLFG-GPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPS 79 (263)
Q Consensus 1 llG~~~~~~-~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (263)
++||++.+. ...+++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|.+++.......++.+...+.+
T Consensus 45 l~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~ 124 (519)
T PLN00168 45 LLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITR 124 (519)
T ss_pred ccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeC
Confidence 578887653 1145788999999999999999999999999999999999998888888888764433444433212333
Q ss_pred CCCChhHHHHHh-HHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcccc
Q 041575 80 SPYGSYWRETRK-IATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158 (263)
Q Consensus 80 ~~~g~~w~~~Rk-~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~ 158 (263)
..+|+.|+++|| +++| +|+.++++.+.+.+.++++.+++.|.+.+ ..+..+|+.+.+..++.++|+.++||.++
T Consensus 125 ~~~G~~Wk~~Rr~~~~~-~fs~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~~~v~~~~~~~~~~~~ii~~~~fG~~~ 199 (519)
T PLN00168 125 SSYGPVWRLLRRNLVAE-TLHPSRVRLFAPARAWVRRVLVDKLRREA----EDAAAPRVVETFQYAMFCLLVLMCFGERL 199 (519)
T ss_pred CCCCHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCcCHHHHHHHHHHHHHHHHHcCCCc
Confidence 356999999987 6776 79999999999999999999999997521 23346899999999999999999999988
Q ss_pred CCCcchHHHHHHHHHHHhh-hcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCC----CC-C----
Q 041575 159 TSQEGTDLHEHAASFFTLF-GKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGS----SE-V---- 228 (263)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~-~---- 228 (263)
+......+........... ....+..++|.+.+....+..++..+..+.+.+++.++|+++++.... +. .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 279 (519)
T PLN00168 200 DEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKET 279 (519)
T ss_pred ChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccc
Confidence 5422122323333222211 112233455643322111223445567788899999999988764311 10 0
Q ss_pred CCCCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 229 EGDEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 229 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
...+|+++.|++...++ +++..+++++|.++|
T Consensus 280 ~~~~d~l~~ll~~~~~~--~~~~~lt~~~i~~~~ 311 (519)
T PLN00168 280 TFEHSYVDTLLDIRLPE--DGDRALTDDEIVNLC 311 (519)
T ss_pred cccccHHHHHHhhhccc--cccCCCCHHHHHHHH
Confidence 01369999999765322 123569999998876
No 12
>PLN02738 carotene beta-ring hydroxylase
Probab=99.96 E-value=2.2e-27 Score=199.06 Aligned_cols=242 Identities=18% Similarity=0.196 Sum_probs=167.0
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccCC
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSSP 81 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (263)
+||+..+.+ +.++..+.+||++|||||++++|+.++|+|+||+.+++||.++...|.+++.........+ .++++.+
T Consensus 142 ~G~l~~i~~-g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g--~~l~~~d 218 (633)
T PLN02738 142 KGSISAVRG-EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG--KGLIPAD 218 (633)
T ss_pred cCcHHHhcC-chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC--CceecCC
Confidence 577776654 6788999999999999999999998999999999999999876666766543222222222 3566554
Q ss_pred CChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC-
Q 041575 82 YGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS- 160 (263)
Q Consensus 82 ~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~- 160 (263)
|+.|+.+|++++| +|+..++..+.+.+.+++++++++|.+.+ ..+.++|+.+.+..+|+|||+.++||.+++.
T Consensus 219 -ge~wr~rRr~l~p-~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~----~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~ 292 (633)
T PLN02738 219 -GEIWRVRRRAIVP-ALHQKYVAAMISLFGQASDRLCQKLDAAA----SDGEDVEMESLFSRLTLDIIGKAVFNYDFDSL 292 (633)
T ss_pred -cHHHHHHHHhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEeHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 9999999999998 79999999999999999999999997532 2456899999999999999999999999875
Q ss_pred CcchHHHHHHHHHHHhhhcccccc----cccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------CC
Q 041575 161 QEGTDLHEHAASFFTLFGKFVVSD----ALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSS--------EV 228 (263)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 228 (263)
.+++.+...+.............. .+|++..++ .+.+++.+..+.+..+++.+++.+++..+.. ..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~ 370 (633)
T PLN02738 293 SNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMN 370 (633)
T ss_pred ccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccc
Confidence 223344444444333221111111 123323332 2234455555666677777766544321110 01
Q ss_pred CCCCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 229 EGDEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 229 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
....|+++.|++.. ..+++++|.+++
T Consensus 371 ~~~~dil~~Ll~~~--------~~ls~~~L~~e~ 396 (633)
T PLN02738 371 ERDPSILHFLLASG--------DDVSSKQLRDDL 396 (633)
T ss_pred cccchHHHHHHHcC--------CCCCHHHHHHHH
Confidence 12358999999752 247888887765
No 13
>PTZ00404 cytochrome P450; Provisional
Probab=99.96 E-value=2.2e-27 Score=195.66 Aligned_cols=229 Identities=20% Similarity=0.305 Sum_probs=162.4
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||+.++. .+++..+.+|+++|||+|++++|+.++|+++||+++++|+.++...|.+++.......... +.+++..
T Consensus 39 ~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~-~~~l~~~ 115 (482)
T PTZ00404 39 ILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTF-YHGIVTS 115 (482)
T ss_pred eeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeecc-CCceecc
Confidence 579988876 5789999999999999999999999999999999999999876666766664432211111 2356655
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
+|+.|+++|++++| .|++.+++.+.+.+.+.+..+++.|.+.+ ..+.++|+.+++.++++|+|+.++||.+++.
T Consensus 116 -~g~~w~~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~ 189 (482)
T PTZ00404 116 -SGEYWKRNREIVGK-AMRKTNLKHIYDLLDDQVDVLIESMKKIE----SSGETFEPRYYLTKFTMSAMFKYIFNEDISF 189 (482)
T ss_pred -ChHHHHHHHHHHHH-HHhhhccccHHHHHHHHHHHHHHHHHHHH----hcCCccCHHHHHHHHHHHHHHHHHhcccccc
Confidence 59999999999998 68999999999999999999999997422 2345799999999999999999999998865
Q ss_pred Ccc------hHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcH
Q 041575 161 QEG------TDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDF 234 (263)
Q Consensus 161 ~~~------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 234 (263)
.+. ..+...+..++..........++|++..+. ..+.....+..+.+.+++.+.+++++++.... .++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~dl 265 (482)
T PTZ00404 190 DEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE---VPRDL 265 (482)
T ss_pred ccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC---CcccH
Confidence 211 234444444444332221222223222111 11122334456677888888887766543221 34799
Q ss_pred HHHHHhcc
Q 041575 235 IYVMLSLL 242 (263)
Q Consensus 235 l~~ll~~~ 242 (263)
++.|+++.
T Consensus 266 l~~ll~~~ 273 (482)
T PTZ00404 266 LDLLIKEY 273 (482)
T ss_pred HHHHHHHh
Confidence 99999864
No 14
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.96 E-value=2.1e-27 Score=195.01 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=187.6
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhh--hhcCccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEI--LGYNFLATP 78 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 78 (263)
++||++++...++++..+.+|+++|||||++++++.++++|+||+++++|+.++...+..++....... ....+.+++
T Consensus 9 ~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (463)
T PF00067_consen 9 ILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGLF 88 (463)
T ss_dssp TTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSST
T ss_pred ceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccccccccccc
Confidence 589988875226789999999999999999999999999999999999999877667766543322221 112223677
Q ss_pred cCCCChhHHHHHhHHHhhcCChh-HHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccc
Q 041575 79 SSPYGSYWRETRKIATVELLSNH-RLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKR 157 (263)
Q Consensus 79 ~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 157 (263)
+.. |+.|+.+|+++.+ .|+.. .+ .+.+.+.+.++.+++.|.+.. ..+.++|+.++++.+++|+++.++||.+
T Consensus 89 ~~~-~~~~~~~R~~~~~-~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~~~d~i~~~~fG~~ 161 (463)
T PF00067_consen 89 FSD-GERWRRQRRLLAP-AFSSKKIL-KLEPLIDEEAEELIDQLRKKA----GSSGPVDLFDWLRRFALDVIGRVLFGKD 161 (463)
T ss_dssp TSS-HHHHHHHHHHHHH-HHSHHHHH-HHHHHHHHHHHHHHHHHHHTT----TSESEEEHHHHHHHHHHHHHHHHHHSSH
T ss_pred ccc-ccccccccccccc-cccccccc-ccccccccccccccccccccc----cccceeeeecccccccccccccccccce
Confidence 776 8999999999998 56777 66 899999999999999998632 2223799999999999999999999999
Q ss_pred cCCCcc---hHHHHHHHHHHHhhhcc--cccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Q 041575 158 YTSQEG---TDLHEHAASFFTLFGKF--VVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDE 232 (263)
Q Consensus 158 ~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 232 (263)
++..+. .++.+.+..+...+... .+...+|+++++| ....+....+.+.+.+++.+.++++++....+ .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 239 (463)
T PF00067_consen 162 FGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG-DESRR 239 (463)
T ss_dssp HHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-SSSCS
T ss_pred eeecccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-ccccc
Confidence 874222 34556666665544221 2345567777776 34456667777889999999999998876654 12457
Q ss_pred cHHHHHHhcc-ccccccCCCCCchhhhhhhc
Q 041575 233 DFIYVMLSLL-YDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 233 d~l~~ll~~~-~~~~~~~~~~l~~~~i~~~~ 262 (263)
|+++.++.+. ..+ ++..+++++|.+++
T Consensus 240 d~l~~ll~~~~~~~---~~~~ls~~~i~~~~ 267 (463)
T PF00067_consen 240 DLLDSLLQASSDSD---GPSGLSDEEIAAEL 267 (463)
T ss_dssp SHHHHHHHHHHTTT---TTSSSSHHHHHHHH
T ss_pred cccccccccccccc---cccccccccccccc
Confidence 9999999986 222 12479999998865
No 15
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.95 E-value=3.3e-26 Score=189.69 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=163.3
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++++.. ...+..+.+|+++||||+++++|++++|+++||+++++|+.++...|.+++.......+.+.+.+.+++
T Consensus 40 ~~g~l~~~~~-~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~ 118 (503)
T PLN02394 40 IFGNWLQVGD-DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT 118 (503)
T ss_pred eeeeHHhcCC-CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeec
Confidence 4788877753 336789999999999999999999999999999999999987777777766433333332222244555
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
.+|+.|+++||++.+++|++++++.+.+.++++++++++.|.+.. ...+..+|+.+.+..+++|+++.++||.+++.
T Consensus 119 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~---~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~ 195 (503)
T PLN02394 119 VYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANP---EAATEGVVIRRRLQLMMYNIMYRMMFDRRFES 195 (503)
T ss_pred CCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhh---hccCCcEecHHHHHHHHHHHHHHHHhCCCccc
Confidence 569999999999973379999999999999999999999997432 11234699999999999999999999999876
Q ss_pred CcchHHH---HHHHHHHHhhhc--ccccccccccccccCcccHHHHHHHHHHHHH-HHHHHHHHHHHhhCCC--CCCCCC
Q 041575 161 QEGTDLH---EHAASFFTLFGK--FVVSDALPFLRWLDIGGNEKLMKKTAKEFDI-ILQQWLDEHKIKRGSS--EVEGDE 232 (263)
Q Consensus 161 ~~~~~~~---~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~--~~~~~~ 232 (263)
.+...+. ............ ..+..++|++.... ..+.+........... +.+..++++++..+.. .....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 274 (503)
T PLN02394 196 EDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLK 274 (503)
T ss_pred ccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhh
Confidence 3222221 111111111111 11123344332211 1112222222222223 3344566665432211 111346
Q ss_pred cHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 233 DFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 233 d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
|+++.|+++..++ .+++++|..++
T Consensus 275 d~l~~ll~~~~~~------~l~~~~i~~~~ 298 (503)
T PLN02394 275 CAIDHILEAQKKG------EINEDNVLYIV 298 (503)
T ss_pred hHHHHHHhccccC------CCCHHHHHHHH
Confidence 9999999875433 48898887653
No 16
>PLN03018 homomethionine N-hydroxylase
Probab=99.95 E-value=6.2e-26 Score=187.98 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=166.6
Q ss_pred CcccccccCCCCchh-HHHHHHHhhc-CCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccc
Q 041575 1 MIGHLHLFGGPEPTH-RILGNMANKY-GPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATP 78 (263)
Q Consensus 1 llG~~~~~~~~~~~~-~~~~~~~~~y-G~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (263)
++||++++.. ..++ .++.++.++| ||||++++|+.++|+|+||+++++++.++...|.+|+.......++.+..+++
T Consensus 50 ~iGnl~~l~~-~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~ 128 (534)
T PLN03018 50 ILGNLPELIM-TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMG 128 (534)
T ss_pred eeccHHHhcc-CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceE
Confidence 5789888642 1222 3455666665 79999999999999999999999999888888888876544444444333567
Q ss_pred cCCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcccc
Q 041575 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158 (263)
Q Consensus 79 ~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~ 158 (263)
+..+|+.|+++|+++++.+++......+.+.+..++.++++.|.+.. ..+.++|+.+.+.++++|+|+.++||.++
T Consensus 129 ~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~t~~vi~~~~fG~~~ 204 (534)
T PLN03018 129 TSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMY----QRSETVDVRELSRVYGYAVTMRMLFGRRH 204 (534)
T ss_pred ecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc----ccCCceeHHHHHHHHHHHHHHHHHhCCcc
Confidence 77669999999999998555555555555666677899999997422 22347999999999999999999999987
Q ss_pred CCC-----cchHHHH----HHHHHHHhhh---ccccccccc-ccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 041575 159 TSQ-----EGTDLHE----HAASFFTLFG---KFVVSDALP-FLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGS 225 (263)
Q Consensus 159 ~~~-----~~~~~~~----~~~~~~~~~~---~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (263)
+.. +...+.. .......... .....+.+| |+++++..+..++.......+.++++++|+++++....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 284 (534)
T PLN03018 205 VTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWRE 284 (534)
T ss_pred ccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 531 1112111 1222222111 111122333 44332222333445555667888999999988764321
Q ss_pred C-CCCCCCcHHHHHHhccccccccCCC-CCchhhhhhhc
Q 041575 226 S-EVEGDEDFIYVMLSLLYDNAKQLPD-SDADTVIKALC 262 (263)
Q Consensus 226 ~-~~~~~~d~l~~ll~~~~~~~~~~~~-~l~~~~i~~~~ 262 (263)
. ....+.|+++.|++..+++ +. .+++++|.++|
T Consensus 285 ~~~~~~~~d~l~~ll~~~~~~----~~~~ls~~~i~~~~ 319 (534)
T PLN03018 285 KGGKAAVEDWLDTFITLKDQN----GKYLVTPDEIKAQC 319 (534)
T ss_pred ccCCCCcccHHHHHHHhhccc----CCCCCCHHHHHHHH
Confidence 1 1112369999999865433 22 49999998775
No 17
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=4.2e-26 Score=182.39 Aligned_cols=249 Identities=19% Similarity=0.192 Sum_probs=164.2
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCc--chhhhhhhhcCccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRP--RRMAMEILGYNFLATP 78 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (263)
++||+..+...+.+.....+...+|||++.++.+..|.++|+||+++++|++++.++|.+|. ...-... .....+++
T Consensus 41 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~-~l~~~~Lf 119 (499)
T KOG0158|consen 41 FLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED-PLSALNLF 119 (499)
T ss_pred cEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC-cccccCch
Confidence 46888877522333555555545559999999999999999999999999999999998854 3211110 11112556
Q ss_pred cCCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcccc
Q 041575 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRY 158 (263)
Q Consensus 79 ~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~ 158 (263)
+.. |+.||++|..++| .|++.+++.|.+.+++.++++++.+.+... .+..+++.+...++|.|||+.++||.+.
T Consensus 120 ~~~-g~~WK~lR~~lsP-~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~----~~~~~~~~dl~~~yT~DVI~~~AfG~~~ 193 (499)
T KOG0158|consen 120 FLR-GERWKRLRTKLSP-TFTSGKLKKMFPTMEEVGDELVRHLRRKSE----GGQEGEIKDLCARYTTDVIGSCAFGLDA 193 (499)
T ss_pred hcc-CchHHHHHHhhcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhc----ccCCccHHHHHHHHHHHHHhHhhcccch
Confidence 665 9999999999998 799999999999999999999999986431 1146888888999999999999999988
Q ss_pred CCC-c-chHHHHHHHHHHHh-hhccc----ccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Q 041575 159 TSQ-E-GTDLHEHAASFFTL-FGKFV----VSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGD 231 (263)
Q Consensus 159 ~~~-~-~~~~~~~~~~~~~~-~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 231 (263)
+.. + ..++.......... ..... ....+|.+...- .......+....+.+.+...++.|.++ ...+
T Consensus 194 ~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~~-----~~~r 266 (499)
T KOG0158|consen 194 NSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREKE-----NIER 266 (499)
T ss_pred hhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHhc-----CCCC
Confidence 772 2 24555544444433 21111 111223221110 001111233344445555555555221 1356
Q ss_pred CcHHHHHHhcccccc-ccCCC-CCchhhhhhhcC
Q 041575 232 EDFIYVMLSLLYDNA-KQLPD-SDADTVIKALCL 263 (263)
Q Consensus 232 ~d~l~~ll~~~~~~~-~~~~~-~l~~~~i~~~~~ 263 (263)
+||++.|+++..++. +.... .||.+||+++|+
T Consensus 267 ~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQaf 300 (499)
T KOG0158|consen 267 NDFIDLLLDARASDFAKSKSHKALTDDEIAAQAF 300 (499)
T ss_pred chHHHHHHHhhcccccccccccccCHHHHHHHHH
Confidence 899999999875411 11112 699999999984
No 18
>PLN02936 epsilon-ring hydroxylase
Probab=99.94 E-value=4e-25 Score=182.13 Aligned_cols=234 Identities=16% Similarity=0.154 Sum_probs=163.8
Q ss_pred CchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccCCCChhHHHHHh
Q 041575 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSSPYGSYWRETRK 91 (263)
Q Consensus 12 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk 91 (263)
+.++..+.+|+++||||+++++|+.+.|+++||+++++|+.+....|.+++.........+ .++++++ |+.|+++||
T Consensus 36 ~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~--~~i~~~~-g~~wk~~Rk 112 (489)
T PLN02936 36 GALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLFG--SGFAIAE-GELWTARRR 112 (489)
T ss_pred cHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHhc--CccccCC-chHHHHHHH
Confidence 5688999999999999999999999999999999999999776677766553322222222 3566665 999999999
Q ss_pred HHHhhcCChhHHHHhHH-HHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCCC-cchHHHHH
Q 041575 92 IATVELLSNHRLEKLKH-VRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQ-EGTDLHEH 169 (263)
Q Consensus 92 ~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~ 169 (263)
+++| .|+..++..+.+ .+.++++.+++.|.+.+ ..++++|+.+++..+++|+|+.++||.+++.. ...++...
T Consensus 113 ~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~----~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 187 (489)
T PLN02936 113 AVVP-SLHRRYLSVMVDRVFCKCAERLVEKLEPVA----LSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTDSPVIQA 187 (489)
T ss_pred hhcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCceeHHHHHHHHHHHHHHHHHcCCCccccccCcHHHHH
Confidence 9998 689888888755 78889999999997532 23458999999999999999999999998762 22344444
Q ss_pred HHHHHHhhhccccccccccccc--cc-CcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC---------CCCCCcHHHH
Q 041575 170 AASFFTLFGKFVVSDALPFLRW--LD-IGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSE---------VEGDEDFIYV 237 (263)
Q Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~d~l~~ 237 (263)
+.......... ...++|++.+ +. +.+..++..++.+.+.+++.+.++++++..+... .....|+++.
T Consensus 188 ~~~~~~~~~~~-~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ 266 (489)
T PLN02936 188 VYTALKEAETR-STDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRF 266 (489)
T ss_pred HHHHHHHHHHh-hhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHH
Confidence 44433322111 1223343211 10 1123445667778888899988888765432110 0123689999
Q ss_pred HHhccccccccCCCCCchhhhhhhc
Q 041575 238 MLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 238 ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
|+.+. +.+++++|.++|
T Consensus 267 ll~~~--------~~~~~~~i~~~~ 283 (489)
T PLN02936 267 LLASR--------EEVSSVQLRDDL 283 (489)
T ss_pred HHhcc--------ccCCHHHHHHHH
Confidence 99653 247888888765
No 19
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=3.6e-24 Score=168.50 Aligned_cols=208 Identities=15% Similarity=0.170 Sum_probs=162.2
Q ss_pred CchhHHHHHHHhhcCCeEEEE-ecCeeEEEecCHHHHHHHHhhCCccccCCc-c---hhhhhhhhcCccccccCCCChhH
Q 041575 12 EPTHRILGNMANKYGPIFTMK-MGVNRALVVSNSEITKECFTTNDKALASRP-R---RMAMEILGYNFLATPSSPYGSYW 86 (263)
Q Consensus 12 ~~~~~~~~~~~~~yG~i~~~~-~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~g~~w 86 (263)
.+.|+.....+++|||||+.. +|+...|.+.+|++++.+|. +.+.+.-|| . +....-......|++... |++|
T Consensus 73 ~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r-~EG~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~-G~~W 150 (519)
T KOG0159|consen 73 TKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFR-NEGKYPFRPLLIEPWVAYRDFRGGVCGLFLLE-GPEW 150 (519)
T ss_pred hHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHh-cCCCCCCcccccchhhhhHHhhccCCCcccCC-CHHH
Confidence 678999999999999999999 88899999999999999995 455566675 2 122222333344777776 9999
Q ss_pred HHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCC-Cc--c
Q 041575 87 RETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTS-QE--G 163 (263)
Q Consensus 87 ~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~-~~--~ 163 (263)
.+.|..++|.++++++++.|.+.+++.+++++..+.+.... ..+..+.|+.+.+.+++++.||.++||.++++ .+ +
T Consensus 151 ~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~-~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~ 229 (519)
T KOG0159|consen 151 QRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP-ERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPP 229 (519)
T ss_pred HHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc-cccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCC
Confidence 99999999999999999999999999999999999865532 23445789999999999999999999999998 21 2
Q ss_pred ---hHHHHHHHHHHHhhhcccccccc-cccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 041575 164 ---TDLHEHAASFFTLFGKFVVSDAL-PFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSS 226 (263)
Q Consensus 164 ---~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 226 (263)
+.+.+++..++..... ..+. +++++++ ++.++++.++.+.+.+++...|+++.++.+..
T Consensus 230 ~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~-t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~ 292 (519)
T KOG0159|consen 230 SEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFP-TKVWKDFVRAWDQIFDVGDKYIDNALEELEKQ 292 (519)
T ss_pred HHHHHHHHHHHHHHHhHHH---HHhcchHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444555555544332 2333 4777887 45578888888999999999999887766544
No 20
>PLN02500 cytochrome P450 90B1
Probab=99.93 E-value=1.6e-24 Score=178.93 Aligned_cols=232 Identities=14% Similarity=0.163 Sum_probs=160.4
Q ss_pred CcccccccCC---CCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcccc
Q 041575 1 MIGHLHLFGG---PEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77 (263)
Q Consensus 1 llG~~~~~~~---~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (263)
++||++.+.. ...++.++.+|+++|||++++++|+.++|+++||+++++|+.+++..|.++........++. .++
T Consensus 48 iiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~g~--~~~ 125 (490)
T PLN02500 48 FLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGILGK--WSM 125 (490)
T ss_pred chhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHHhCc--ccc
Confidence 5788754321 13577889999999999999999999999999999999999877776754432222333332 256
Q ss_pred ccCCCChhHHHHHhHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcc
Q 041575 78 PSSPYGSYWRETRKIATVELLSNHRLEK-LKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGK 156 (263)
Q Consensus 78 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~ 156 (263)
++. +|+.|+++|+++++ .|++.+++. +.+.+.+.+..+++.|. . +.++|+.+.+.++++|+|++++||.
T Consensus 126 ~~~-~g~~wr~~Rk~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~------~--~~~vd~~~~~~~~~~~vi~~~~fg~ 195 (490)
T PLN02500 126 LVL-VGDMHRDMRSISLN-FLSHARLRTHLLKEVERHTLLVLDSWK------E--NSTFSAQDEAKKFTFNLMAKHIMSM 195 (490)
T ss_pred ccc-CCHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHhC------C--CCCEEehHHHHHHHHHHHHHHHhCC
Confidence 666 49999999999997 789988887 56777788888888774 1 2369999999999999999999998
Q ss_pred ccCCCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-CCCCcHH
Q 041575 157 RYTSQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEV-EGDEDFI 235 (263)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d~l 235 (263)
+.+..+...+...+......... .|. ++|... .++..+..+.+.+++.+.+++++++...+.. ..+.|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~p~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 266 (490)
T PLN02500 196 DPGEEETEQLKKEYVTFMKGVVS------APL--NFPGTA-YRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLL 266 (490)
T ss_pred CCCchHHHHHHHHHHHHHhhhhc------chh--cCCCcc-cHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Confidence 76432222333323332222111 111 233112 2455567788999999999988765432211 1246999
Q ss_pred HHHHhccccccccCCCCCchhhhhhhc
Q 041575 236 YVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 236 ~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+.+++. ..+++++|.+++
T Consensus 267 ~~ll~~---------~~ls~~~i~~~~ 284 (490)
T PLN02500 267 GWVLKH---------SNLSTEQILDLI 284 (490)
T ss_pred HHHHhc---------cCCCHHHHHHHH
Confidence 999973 148889988765
No 21
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.93 E-value=6.2e-24 Score=173.73 Aligned_cols=233 Identities=16% Similarity=0.180 Sum_probs=159.2
Q ss_pred CcccccccCC---CCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcccc
Q 041575 1 MIGHLHLFGG---PEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77 (263)
Q Consensus 1 llG~~~~~~~---~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (263)
++||++++.. ..+++.++.+|+++||+||++++|+.+.|+++||++++++|.++...|..+........++. .++
T Consensus 17 ~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~~~l~g~--~~~ 94 (452)
T PLN03141 17 VIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSLTELMGK--SSI 94 (452)
T ss_pred chhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhHHHHhCc--ccc
Confidence 5788887631 14688999999999999999999999999999999999999887777765532223333332 256
Q ss_pred ccCCCChhHHHHHhHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcc
Q 041575 78 PSSPYGSYWRETRKIATVELLSNHRLEK-LKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGK 156 (263)
Q Consensus 78 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~ 156 (263)
++. +|+.|+++|+++++ .|+..++.. ..+.+.+.+.++++.|. .+.++|+.+.+..+++++|+.++||.
T Consensus 95 ~~~-~g~~wr~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~vi~~~~~G~ 164 (452)
T PLN03141 95 LLI-NGSLQRRVHGLIGA-FLKSPHLKAQITRDMERYVSESLDSWR--------DDPPVLVQDETKKIAFEVLVKALISL 164 (452)
T ss_pred ccc-CcHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhcc--------CCCCEEhHHHHHHHHHHHHHHHHcCC
Confidence 666 49999999999997 677776665 34556566665655552 23479999999999999999999997
Q ss_pred ccCCCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC---CCCCc
Q 041575 157 RYTSQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEV---EGDED 233 (263)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~d 233 (263)
+++. +..++...+..+..... .+|+ ++|... .++..++.+.+.+++.+.|+++++....+.. ..+.|
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d 234 (452)
T PLN03141 165 EPGE-EMEFLKKEFQEFIKGLM------SLPI--KLPGTR-LYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKD 234 (452)
T ss_pred CchH-HHHHHHHHHHHHhhhHH------hCcc--CCCchH-hHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhh
Confidence 6532 21222222222222111 1232 233212 2344566788999999999988765432211 12369
Q ss_pred HHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 234 FIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 234 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+++.++++. +..+++++|..++
T Consensus 235 ~l~~ll~~~-------~~~l~~~~i~~~~ 256 (452)
T PLN03141 235 VVDVLLRDG-------SDELTDDLISDNM 256 (452)
T ss_pred HHHHHHhcC-------CCCCCHHHHHHHH
Confidence 999999753 1358899988765
No 22
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.93 E-value=3.3e-24 Score=176.12 Aligned_cols=242 Identities=21% Similarity=0.239 Sum_probs=175.4
Q ss_pred CcccccccCCC-CchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchh--hhhhhhcCcccc
Q 041575 1 MIGHLHLFGGP-EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRM--AMEILGYNFLAT 77 (263)
Q Consensus 1 llG~~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 77 (263)
++|+++++... ..+..++.++..+||++++.|+|+.+.|+++||+.+++|+.++...+.+.+... +..++|. |+
T Consensus 45 ~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG~---gl 121 (497)
T KOG0157|consen 45 LIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWLGD---GL 121 (497)
T ss_pred cccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHhcC---cc
Confidence 57888887531 467788899999999999999999999999999999999965555454444332 3344443 77
Q ss_pred ccCCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccc
Q 041575 78 PSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKR 157 (263)
Q Consensus 78 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 157 (263)
+++. |+.|+++||+++| +|+...++.+...+.+.+..++..+... ..++.+|+.+.+.++|+|+||+++||..
T Consensus 122 l~~~-g~~W~~~Rk~~~~-~f~~~~L~~~~~~~~~~~~~~~~~~~~~-----~~~~~vd~~~~~~~~tld~i~~~~~G~~ 194 (497)
T KOG0157|consen 122 LFSD-GEKWHKHRKLLTP-AFHFEILKSFVPVFIESSLILLLLLELA-----ASGEEVDLQDLLKRLTLDIICKTAMGPE 194 (497)
T ss_pred ccCC-chHHHHHHhhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hcCCeEcHHHHHHHHHHHHHHHHhcCCc
Confidence 8887 9999999999998 7999999999999999998888887641 1222399999999999999999999933
Q ss_pred cCC---CcchHHHHHHHHHHHhhhccccccccc-ccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC---CC
Q 041575 158 YTS---QEGTDLHEHAASFFTLFGKFVVSDALP-FLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEV---EG 230 (263)
Q Consensus 158 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~ 230 (263)
... ....++.+++......+... ...| +..+++..+..++..++.+.++++++++|++|+++...+.. ..
T Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~ 271 (497)
T KOG0157|consen 195 SLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKK 271 (497)
T ss_pred cccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 211 12245566666555544322 1234 43444422356788899999999999999999976543321 23
Q ss_pred CCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 231 DEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 231 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
..|+++.+....+ ..+++++|.+.|
T Consensus 272 ~~d~L~~~~~~~~-------~~l~~~~i~d~v 296 (497)
T KOG0157|consen 272 RLDFLDTLLLEED-------KPLTDEDIRDEV 296 (497)
T ss_pred hhhHHHHHHHhcc-------CCCCHHHHHHHH
Confidence 4688885333221 368899888765
No 23
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.93 E-value=5.8e-24 Score=174.26 Aligned_cols=224 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchh-hhhhhhcCcccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRM-AMEILGYNFLATPS 79 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (263)
++||+.++.. ++++.++.+++++||++++++++++++|+++||+++++|+.++...|. +... ...... +..++++
T Consensus 45 ~iG~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~~~-g~~~l~~ 120 (463)
T PLN02196 45 YVGETFQLYS-QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKERML-GKQAIFF 120 (463)
T ss_pred ccchHHHHHh-cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHHHc-Ccccccc
Confidence 4788876533 678999999999999999999999999999999999999987666553 2221 111111 2225666
Q ss_pred CCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 80 SPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 80 ~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
.+ |+.|+++||++++ .|++.+++.+.+.+.+++.++++.|. +.++|+.+++..+++++++.++||.+..
T Consensus 121 ~~-g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~v~~~~~fG~~~~ 189 (463)
T PLN02196 121 HQ-GDYHAKLRKLVLR-AFMPDAIRNMVPDIESIAQESLNSWE---------GTQINTYQEMKTYTFNVALLSIFGKDEV 189 (463)
T ss_pred cC-cHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHcCC---------CCeEEeHHHHHHHHHHHHHHHHcCCCCc
Confidence 64 9999999999997 78999999999999999999998874 2368999999999999999999998753
Q ss_pred CCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHHHH
Q 041575 160 SQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239 (263)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 239 (263)
. ....+......+ .. ....+|+ .+|. ...++..++.+.+.+++.+.|+++++... .+.|+++.++
T Consensus 190 ~-~~~~~~~~~~~~----~~--~~~~~~~--~~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~~-----~~~d~l~~ll 254 (463)
T PLN02196 190 L-YREDLKRCYYIL----EK--GYNSMPI--NLPG-TLFHKSMKARKELAQILAKILSKRRQNGS-----SHNDLLGSFM 254 (463)
T ss_pred h-HHHHHHHHHHHH----hc--chhcccc--cCCC-ccchHHHHHHHHHHHHHHHHHHHHhhcCC-----CcccHHHHHH
Confidence 2 112222222111 11 1112332 2331 22345667778888999999888765321 2369999998
Q ss_pred hccccccccCCCCCchhhhhhhc
Q 041575 240 SLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+. +..+++++|.+++
T Consensus 255 ~~--------~~~l~~~ei~~~~ 269 (463)
T PLN02196 255 GD--------KEGLTDEQIADNI 269 (463)
T ss_pred hc--------CCCCCHHHHHHHH
Confidence 53 1358888887765
No 24
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.93 E-value=2e-23 Score=172.81 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=161.7
Q ss_pred CcccccccC---CCCchhHHHHHHHhhcCC--eEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcc
Q 041575 1 MIGHLHLFG---GPEPTHRILGNMANKYGP--IFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFL 75 (263)
Q Consensus 1 llG~~~~~~---~~~~~~~~~~~~~~~yG~--i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (263)
++||++++. ...+++.++.+++++||+ ++++++++.+.|+++||+++++|+.++ ..|.++........++. .
T Consensus 52 ilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~~~g~--~ 128 (490)
T PLN02302 52 VIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVELIGR--K 128 (490)
T ss_pred ccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHHHhcc--c
Confidence 578887652 114688999999999997 799999999999999999999999754 44544332222223332 2
Q ss_pred ccccCCCChhHHHHHhHHHhhcC-ChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHH
Q 041575 76 ATPSSPYGSYWRETRKIATVELL-SNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIE 154 (263)
Q Consensus 76 ~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~f 154 (263)
+++.. +|+.|+++|+++.+ .| ++++++.+.+.+.+.+.++++.|. .. ..+|+.+.+..+++++++.++|
T Consensus 129 ~~~~~-~g~~w~~~R~~~~~-~f~~~~~l~~~~~~i~~~v~~~~~~~~------~~--~~v~~~~~~~~~~~~vi~~~~~ 198 (490)
T PLN02302 129 SFVGI-TGEEHKRLRRLTAA-PVNGPEALSTYIPYIEENVKSCLEKWS------KM--GEIEFLTELRKLTFKIIMYIFL 198 (490)
T ss_pred ccccc-CcHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHhc------CC--CCEehHHHHHHHHHHHHHHHHc
Confidence 34444 59999999999998 56 577899999999999999999885 22 2599999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcH
Q 041575 155 GKRYTSQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDF 234 (263)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ 234 (263)
|.+++. ....+......+...+. .++. .+|... .++..++.+.+.+++.+.|+++++....+......|+
T Consensus 199 G~~~~~-~~~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~ 268 (490)
T PLN02302 199 SSESEL-VMEALEREYTTLNYGVR------AMAI--NLPGFA-YHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDM 268 (490)
T ss_pred CCCChH-HHHHHHHHHHHHHHHhh------hCCc--CCCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCH
Confidence 987643 11222222221111111 1111 223111 2344456678888999999888765433222234799
Q ss_pred HHHHHhccccccccCCCCCchhhhhhhc
Q 041575 235 IYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 235 l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
++.|+++..++ +..+++++|.+++
T Consensus 269 l~~ll~~~~~~----~~~~~~~~i~~~~ 292 (490)
T PLN02302 269 LDLLLDAEDEN----GRKLDDEEIIDLL 292 (490)
T ss_pred HHHHHhhhccC----CCCCCHHHHHHHH
Confidence 99999875443 4568999988765
No 25
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.92 E-value=2.5e-23 Score=171.72 Aligned_cols=248 Identities=12% Similarity=0.112 Sum_probs=164.6
Q ss_pred CcccccccC-CCCchhHHHHHHHhhcCCeEE---EEecCeeEEEecCHHHHHHHHhhCCccccCCcchh-hhhhhhcCcc
Q 041575 1 MIGHLHLFG-GPEPTHRILGNMANKYGPIFT---MKMGVNRALVVSNSEITKECFTTNDKALASRPRRM-AMEILGYNFL 75 (263)
Q Consensus 1 llG~~~~~~-~~~~~~~~~~~~~~~yG~i~~---~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 75 (263)
++||+.++. .....++.+.++..+||..++ +++|+.++|+|+||+++++|+.++...|.+++... ....+ +.
T Consensus 41 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~~~---g~ 117 (500)
T PLN02169 41 FLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFDVL---GE 117 (500)
T ss_pred cccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHHhh---cC
Confidence 578887653 112344555555556886655 67889999999999999999987766676654321 11222 24
Q ss_pred ccccCCCChhHHHHHhHHHhhcCChhHHHH--hHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHH
Q 041575 76 ATPSSPYGSYWRETRKIATVELLSNHRLEK--LKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRII 153 (263)
Q Consensus 76 ~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 153 (263)
|+++++ |+.|+.+||+++| +|+...+.. +.+.+.+.++.+++.|.+.+ ..+.++|+.+.+.++|+|+|+.++
T Consensus 118 gl~~~~-g~~Wr~~Rk~l~p-~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~t~dvi~~~~ 191 (500)
T PLN02169 118 GILTVD-FELWEDLRKSNHA-LFHNQDFIELSLSSNKSKLKEGLVPFLDNAA----HENIIIDLQDVFMRFMFDTSSILM 191 (500)
T ss_pred cccccC-cHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCeEeHHHHHHHHHHHHHHhhe
Confidence 777776 9999999999998 789887764 33667788888888886432 234579999999999999999999
Q ss_pred HccccCCCc----chHHHHHHHHHHHhhhccccccccccc-----ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041575 154 EGKRYTSQE----GTDLHEHAASFFTLFGKFVVSDALPFL-----RWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRG 224 (263)
Q Consensus 154 fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 224 (263)
||.+.+..+ ..++...+......... ..+.|++ .+++ .+..++..++.+.+.+++.++|++++++..
T Consensus 192 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~ 267 (500)
T PLN02169 192 TGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKIISSRRKEEI 267 (500)
T ss_pred eCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999875411 13455554444332211 1122321 2222 234567788889999999999998876422
Q ss_pred CC--CCCCCCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 225 SS--EVEGDEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 225 ~~--~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
.. .....+|+++.++++..+. ...+..+++++|.++|
T Consensus 268 ~~~~~~~~~~d~l~~ll~~~~~~-~~~~~~~~~~~i~~~~ 306 (500)
T PLN02169 268 SRAETEPYSKDALTYYMNVDTSK-YKLLKPKKDKFIRDVI 306 (500)
T ss_pred ccccccCCCcCHHHHHHhccccc-cccccCCChHHHHHHH
Confidence 11 1112369999999864221 0112357888888775
No 26
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.92 E-value=3.7e-23 Score=171.90 Aligned_cols=243 Identities=16% Similarity=0.137 Sum_probs=161.6
Q ss_pred CcccccccCCCCchhHHHHHHHhhc---CCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchh-hhhhhhcCccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKY---GPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRM-AMEILGYNFLA 76 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~y---G~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~ 76 (263)
++||++++. .+ +..+.+|.++| |++|++++|+.+.|+++||+++++|+.++...|.+++... ....+.+ .+
T Consensus 40 ~~G~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g--~~ 114 (516)
T PLN03195 40 IIGAALEQL--KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLLG--DG 114 (516)
T ss_pred eecchHHHH--hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHHhc--Ce
Confidence 468876543 22 44567777777 8999999999999999999999999976545565443221 1111222 25
Q ss_pred cccCCCChhHHHHHhHHHhhcCChhHHHHhHHHH-HHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHc
Q 041575 77 TPSSPYGSYWRETRKIATVELLSNHRLEKLKHVR-ESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEG 155 (263)
Q Consensus 77 ~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 155 (263)
++.. +|+.|+++||++++ .|+..+++.+.+.+ .+.++.+++.+.+.. ..+.++|+.+++..+++|+|+.++||
T Consensus 115 l~~~-~g~~w~~~Rr~l~~-~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~~~~~~~~dvi~~~~fG 188 (516)
T PLN03195 115 IFNV-DGELWRKQRKTASF-EFASKNLRDFSTVVFREYSLKLSSILSQAS----FANQVVDMQDLFMRMTLDSICKVGFG 188 (516)
T ss_pred eecc-CcHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCeEcHHHHHHHHHHHHHHHHHhC
Confidence 5555 59999999999998 68999999999876 666777777776421 23457999999999999999999999
Q ss_pred cccCCCc----chHHHHHHHHHHHhhhccccccccccc---ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--
Q 041575 156 KRYTSQE----GTDLHEHAASFFTLFGKFVVSDALPFL---RWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSS-- 226 (263)
Q Consensus 156 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 226 (263)
.+++..+ ...+.+.++......... . +.|++ .+++ ....+.+.+....+.+++.+.+++++++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 264 (516)
T PLN03195 189 VEIGTLSPSLPENPFAQAFDTANIIVTLR-F--IDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARK 264 (516)
T ss_pred CCccccccCCCccHHHHHHHHHHHHHHHH-H--hcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9886521 124444444333221110 1 11211 1222 12234445667778889999998887653221
Q ss_pred -CCCCCCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 227 -EVEGDEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 227 -~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
.....+|+++.|+++..++ +..+++++|.+++
T Consensus 265 ~~~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~ 297 (516)
T PLN03195 265 SGKKVKHDILSRFIELGEDP----DSNFTDKSLRDIV 297 (516)
T ss_pred ccccccccHHHHHHhccCCC----CCCCCHHHHHHHH
Confidence 1113469999999864432 3469999998875
No 27
>PLN02774 brassinosteroid-6-oxidase
Probab=99.92 E-value=1.8e-23 Score=171.44 Aligned_cols=228 Identities=16% Similarity=0.172 Sum_probs=160.7
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccC
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSS 80 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
++||++.+. ++++.++.+++++||+++++++|+.++++++||+++++|+.++...|..+........++. .+++..
T Consensus 41 ~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~--~~~~~~ 116 (463)
T PLN02774 41 LFGETTEFL--KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGT--CNIAAV 116 (463)
T ss_pred chhhHHHHH--HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCc--cchhhc
Confidence 467877665 4567889999999999999999999999999999999999776665533322222233432 255555
Q ss_pred CCChhHHHHHhHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccC
Q 041575 81 PYGSYWRETRKIATVELLSNHRLEK-LKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYT 159 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 159 (263)
+|+.|+.+|+++.+ +|++..++. +.+.+.+.++++++.|. . ++++|+.+.+..+++++++.++||.+.+
T Consensus 117 -~g~~w~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~v~~~~~~~~~~~~~~~~~~~g~~~~ 186 (463)
T PLN02774 117 -HGSTHRYMRGSLLS-LISPTMIRDHLLPKIDEFMRSHLSGWD------G--LKTIDIQEKTKEMALLSALKQIAGTLSK 186 (463)
T ss_pred -CCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhhC------C--CCCEEeeHHHHHHHHHHHHHHHcCCCCh
Confidence 59999999999997 789998876 78889888888888874 1 2369999999999999999999997653
Q ss_pred CCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHHHH
Q 041575 160 SQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVML 239 (263)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 239 (263)
. ..+++. +.+....... ..+|. ++|... .++..++.+.+.+++.+.|+++++.. ..++|+++.|+
T Consensus 187 ~-~~~~~~---~~~~~~~~~~---~~~~~--~lp~~~-~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll 251 (463)
T PLN02774 187 P-ISEEFK---TEFFKLVLGT---LSLPI--DLPGTN-YRSGVQARKNIVRMLRQLIQERRASG-----ETHTDMLGYLM 251 (463)
T ss_pred H-HHHHHH---HHHHHHhccc---ccCCc--CCCChh-hhHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccHHHHHH
Confidence 2 112222 2222221111 01222 344222 34556778889999999998877542 13479999999
Q ss_pred hccccccccCCCCCchhhhhhhc
Q 041575 240 SLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
....+ +..++++||.+++
T Consensus 252 ~~~~~-----~~~~s~~ei~~~~ 269 (463)
T PLN02774 252 RKEGN-----RYKLTDEEIIDQI 269 (463)
T ss_pred hCccC-----CCCCCHHHHHHHH
Confidence 74322 2358999998875
No 28
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.90 E-value=2.7e-22 Score=164.19 Aligned_cols=229 Identities=11% Similarity=0.126 Sum_probs=154.0
Q ss_pred CcccccccCC---CCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCcccc
Q 041575 1 MIGHLHLFGG---PEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLAT 77 (263)
Q Consensus 1 llG~~~~~~~---~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (263)
++||++++.. ..+++.++.+++++|||++++++++.++|+++||+++++++.++...|.+++.......++. .++
T Consensus 40 ~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg~--~~l 117 (472)
T PLN02987 40 LVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGK--HSL 117 (472)
T ss_pred chhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHhCc--ccc
Confidence 5788877631 14588889999999999999999999999999999999999887777765543333444442 367
Q ss_pred ccCCCChhHHHHHhHHHhhcCChhHHHHhHH-HHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHcc
Q 041575 78 PSSPYGSYWRETRKIATVELLSNHRLEKLKH-VRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGK 156 (263)
Q Consensus 78 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~ 156 (263)
++++ |+.|+++|+++.+ +++...+..+.. .+.+.+...++.|. +++++.+.+.+++++++++++||.
T Consensus 118 ~~~~-g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~t~~vi~~~~fg~ 185 (472)
T PLN02987 118 LLMK-GNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSWS----------SRVLLMEEAKKITFELTVKQLMSF 185 (472)
T ss_pred cccC-cHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhhc----------cceehHHHHHHHHHHHHHHHHcCC
Confidence 7775 9999999999874 555545544331 12223333333331 269999999999999999999998
Q ss_pred ccCCCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHH
Q 041575 157 RYTSQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIY 236 (263)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~ 236 (263)
+.+. ..+.+...+......+ ....+|++ . ...++..+..+++.+++.+.|+++++....+. ..++|+++
T Consensus 186 ~~~~-~~~~~~~~~~~~~~~~----~~~~~p~l--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~ 254 (472)
T PLN02987 186 DPGE-WTESLRKEYVLVIEGF----FSVPLPLF--S---TTYRRAIQARTKVAEALTLVVMKRRKEEEEGA-EKKKDMLA 254 (472)
T ss_pred CChH-HHHHHHHHHHHHHhhh----hcCCCcCC--C---chHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-cccccHHH
Confidence 7632 1222222222222111 11223432 1 22466777889999999999999876543321 13479999
Q ss_pred HHHhccccccccCCCCCchhhhhhhc
Q 041575 237 VMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 237 ~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
.|++.. ..++++||.+++
T Consensus 255 ~ll~~~--------~~~~~~ei~~~~ 272 (472)
T PLN02987 255 ALLASD--------DGFSDEEIVDFL 272 (472)
T ss_pred HHHhcC--------CCCCHHHHHHHH
Confidence 999752 248899988765
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.87 E-value=6.5e-20 Score=151.38 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=147.2
Q ss_pred CchhHHHHHHHhhcC-CeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcch-hh-hhhhhcCccccccCCCChhHHH
Q 041575 12 EPTHRILGNMANKYG-PIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRR-MA-MEILGYNFLATPSSPYGSYWRE 88 (263)
Q Consensus 12 ~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~g~~w~~ 88 (263)
.+.+..+..+.++++ .+++++..+. |+++||+++++|+.++...|.+.... .. ....+ .|++.++ |+.|++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g---~gi~~~~-g~~wk~ 133 (502)
T PLN02426 60 DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG---RGIFNVD-GDSWRF 133 (502)
T ss_pred ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---CceeecC-cHHHHH
Confidence 345667767788876 5777766554 89999999999998766667554322 11 12222 3676665 999999
Q ss_pred HHhHHHhhcCChhHHHHhH--HHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCCCc----
Q 041575 89 TRKIATVELLSNHRLEKLK--HVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQE---- 162 (263)
Q Consensus 89 ~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~---- 162 (263)
+||+++| .|+..+++.+. +.+.+.++.+++.|.+.+. ...+.++|+.++++++|+|+|+.++||.+++..+
T Consensus 134 ~Rk~l~~-~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~ 210 (502)
T PLN02426 134 QRKMASL-ELGSVSIRSYAFEIVASEIESRLLPLLSSAAD--DGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLP 210 (502)
T ss_pred HHHHhHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 9999997 78998888764 6777878888888875431 1223579999999999999999999999987622
Q ss_pred chHHHHHHHHHHHhhhccccccccccc----ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHHH
Q 041575 163 GTDLHEHAASFFTLFGKFVVSDALPFL----RWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVM 238 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 238 (263)
..++...++.+....... ....+|++ ++++. +..+++.+..+.+.+++.++|+++++... ....|+++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----~~~~dll~~l 284 (502)
T PLN02426 211 ISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLGF----SASKDLLSRF 284 (502)
T ss_pred ccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhccc----CCcchHHHHH
Confidence 234555555443322111 11122322 23332 33466777888999999999998876421 1236999999
Q ss_pred Hhcc
Q 041575 239 LSLL 242 (263)
Q Consensus 239 l~~~ 242 (263)
+++.
T Consensus 285 l~~~ 288 (502)
T PLN02426 285 MASI 288 (502)
T ss_pred HhcC
Confidence 9753
No 30
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=2.4e-16 Score=127.06 Aligned_cols=209 Identities=15% Similarity=0.139 Sum_probs=148.3
Q ss_pred HHHHHHHhhcCCeEEEEecCee--EEEecCHHHHHHHHhhCCccccCCcchh-----hhhhhhcCccccccCCCChhHHH
Q 041575 16 RILGNMANKYGPIFTMKMGVNR--ALVVSNSEITKECFTTNDKALASRPRRM-----AMEILGYNFLATPSSPYGSYWRE 88 (263)
Q Consensus 16 ~~~~~~~~~yG~i~~~~~~~~~--~v~i~~p~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~w~~ 88 (263)
.....+.+.||.+..++..++. .+++++++++++++.+.. .+++..... ....++. .++++. +|+.|.+
T Consensus 26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~ll~~-dg~~H~r 101 (411)
T COG2124 26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD--GSLLTL-DGPEHTR 101 (411)
T ss_pred hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc--cceeec-CCHHHHH
Confidence 4455677788888888776654 899999999999996543 122211111 1122221 135555 4999999
Q ss_pred HHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccccCCCcchHHHH
Q 041575 89 TRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKRYTSQEGTDLHE 168 (263)
Q Consensus 89 ~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~ 168 (263)
+||+++| .|+++.++.+.+.|.+.+.++++.+ + .. ..+++.+.+..+++++|+ .+||.+.+. ...+..
T Consensus 102 ~Rkl~~~-~F~~~~~~~~~~~i~~~~~~~~~~~-~----~~---~~~~v~~~a~~l~~~vi~-~l~Gv~~~~--~~~~~~ 169 (411)
T COG2124 102 LRKLLAP-AFTPRALRGYRPLIREIADRLLDDL-W----QG---GADLVLDFAAELTLRVIA-ELLGVPLED--RPQLLR 169 (411)
T ss_pred HHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHhc-c----cC---CchhHHHHhhhhhHHHHH-HHhCCCHHH--HHHHHH
Confidence 9999998 7999999999999999999999998 3 12 478899999999999999 999988733 223333
Q ss_pred HHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHHHHhcccccccc
Q 041575 169 HAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYVMLSLLYDNAKQ 248 (263)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~ 248 (263)
......... .|. ..+ .....+...+...+.+++..+|++++.. +.+|+++.|+.+.+++
T Consensus 170 ~~~~~~~~~--------~~~--~~~-~~~~~~~~~a~~~~~~~~~~li~~rR~~-------~~~dlls~l~~a~~~~--- 228 (411)
T COG2124 170 WSDALLLRL--------DPD--LGP-EEPWRRARAARRELDAYLRALIAERRAA-------PRDDLLSLLLSAEDDG--- 228 (411)
T ss_pred HHHHHHhcc--------Ccc--cCC-cccHHHHHHHHHHHHHHHHHHHHHhccC-------CcccHHHHHHHHhhCC---
Confidence 333222220 011 111 1224566788899999999999999822 4479999999987766
Q ss_pred CCCCCchhhhhhhc
Q 041575 249 LPDSDADTVIKALC 262 (263)
Q Consensus 249 ~~~~l~~~~i~~~~ 262 (263)
+..||++||.+++
T Consensus 229 -~~~lsd~Ei~~~~ 241 (411)
T COG2124 229 -GGRLSDDEIRDEL 241 (411)
T ss_pred -CCcCCHHHHHHHH
Confidence 3479999999876
No 31
>PLN02648 allene oxide synthase
Probab=99.72 E-value=1.1e-17 Score=136.60 Aligned_cols=153 Identities=11% Similarity=0.113 Sum_probs=112.8
Q ss_pred CcccccccC---CCCchhHHHHHHHhhcCC-eEEEEecCeeE-------EEecCHHHHHHHHhh----CCccccCCcchh
Q 041575 1 MIGHLHLFG---GPEPTHRILGNMANKYGP-IFTMKMGVNRA-------LVVSNSEITKECFTT----NDKALASRPRRM 65 (263)
Q Consensus 1 llG~~~~~~---~~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------v~i~~p~~~~~i~~~----~~~~~~~~~~~~ 65 (263)
++|+++++. ...++..++.+.+++||| ||++++++.|+ |++++|++++.+|.. ....+..... .
T Consensus 27 ~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~-~ 105 (480)
T PLN02648 27 FLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYM-P 105 (480)
T ss_pred CcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeec-c
Confidence 467776542 114567999999999999 99999988555 999999999999963 3333332211 2
Q ss_pred hhhhhhcCccccccCCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHH
Q 041575 66 AMEILGYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTT 145 (263)
Q Consensus 66 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~ 145 (263)
....+|.+....++..+|+.|+++|+++.+ +|+ ..++.+.+.|.+.+.++++.|.+.. ..+.++|+.+.+..+|
T Consensus 106 ~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~-~f~-~~~~~~~~~m~~~~~~~~~~w~~~~----~~~~~vdv~~~~~~lt 179 (480)
T PLN02648 106 STAFTGGYRVLSYLDPSEPKHAKLKSFLFE-LLK-SRHRRFIPEFRAAFAELFDTWEAEL----AKKGKAEFNDPLDQMA 179 (480)
T ss_pred CccccCCceeeeecCCCCchHHHHHHHHHH-HHH-HhhhhhhhHHHHHHHHHHHHHHHHH----hhCCCccccchHHHHH
Confidence 223444321013334459999999999998 688 4778999999999999999996421 2233699999999999
Q ss_pred HHHHHHHHHccccCC
Q 041575 146 FDIIIRIIEGKRYTS 160 (263)
Q Consensus 146 ~~vi~~~~fG~~~~~ 160 (263)
+|++++++||.+.+.
T Consensus 180 ~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 180 FNFLCKALTGKDPSE 194 (480)
T ss_pred HHHHHHHHcCCCcch
Confidence 999999999987643
No 32
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.70 E-value=1.2e-15 Score=118.34 Aligned_cols=234 Identities=16% Similarity=0.155 Sum_probs=163.4
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcch--hhhhhhhcCccccc
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRR--MAMEILGYNFLATP 78 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 78 (263)
++|++..++ ++|.+++.+.++|||+||.+.++|+.+-++.+|+....++.++....+-.... .....++. +++
T Consensus 42 ~lG~a~~fg--k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~---~v~ 116 (486)
T KOG0684|consen 42 WLGSALAFG--KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFGK---GVV 116 (486)
T ss_pred hhhHHHHhc--cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcCC---Ccc
Confidence 478888887 89999999999999999999999999999999999999996553333222111 11222322 455
Q ss_pred cCCCChhHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHH-HHHhccccCCCCcceehhHHHHHHHHHHHHHHHHccc
Q 041575 79 SSPYGSYWRETRKIATVELLSNHRLEKLKHVRESEVTASIKG-LFKDCQNSATGKVSVEMKHWLEGTTFDIIIRIIEGKR 157 (263)
Q Consensus 79 ~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 157 (263)
.........++.+.+.. .++..+++++.+.|.++..+.++. |. ..+ ..|....+.++++=.++.++.|..
T Consensus 117 ~d~~~~~~~e~~~~~k~-~L~~~~lk~~~e~m~~el~~~f~~~~~-------~s~-~~d~l~~~~~~ii~tAs~~ll~~e 187 (486)
T KOG0684|consen 117 YDVPNHVMMEQKKFFKS-ALGGVALKSLVELMLEELHAYFETSLG-------ESG-ETDGLYTFCRLIIFTASRLLLGGE 187 (486)
T ss_pred ccCCCchHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhcccc-------ccc-chhHhhhhhHHHhhhhHHHhhhhh
Confidence 55557778888888886 579999999999999988888887 43 233 455555555555555555555544
Q ss_pred cCCCcchHHHHHHHHHHHhhhcccccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcHHHH
Q 041575 158 YTSQEGTDLHEHAASFFTLFGKFVVSDALPFLRWLDIGGNEKLMKKTAKEFDIILQQWLDEHKIKRGSSEVEGDEDFIYV 237 (263)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ 237 (263)
.-..-++.+...+.++.+.+..+ ...||. ++|.+. .+....+++.+.+.+.+.|.++++..+. ..+|+++.
T Consensus 188 ~r~~~d~~~a~l~~dLd~~F~~~--d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~----~~~dmlq~ 258 (486)
T KOG0684|consen 188 VRDQLDADVAKLYHDLDQGFQPF--DFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISK----WDNDMLQS 258 (486)
T ss_pred hhhhhcchHHHHHHHHhccccch--Hhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcccc----ccHHHHHH
Confidence 33322345556666666655443 234675 666433 4555688899999999999999886543 23699999
Q ss_pred HHhccccccccCCCCCchhhhhhhc
Q 041575 238 MLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 238 ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
+++ ..++ +.+++++|+.+.+
T Consensus 259 l~~-~y~d----g~~~te~e~a~~l 278 (486)
T KOG0684|consen 259 LME-KYKD----GRPTTEEEIAGLL 278 (486)
T ss_pred HHH-Hhhc----CCcCcHHHHHHHH
Confidence 998 4444 6789999887654
No 33
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=70.07 E-value=16 Score=19.96 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=25.6
Q ss_pred HHHHhhcCCeEEEEecC----eeEEEecCHHHHHHHHh
Q 041575 19 GNMANKYGPIFTMKMGV----NRALVVSNSEITKECFT 52 (263)
Q Consensus 19 ~~~~~~yG~i~~~~~~~----~~~v~i~~p~~~~~i~~ 52 (263)
.++.++||+|..+.+.. .-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 46778999999888743 34777889999888874
No 34
>PLN03120 nucleic acid binding protein; Provisional
Probab=62.71 E-value=42 Score=25.72 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=38.9
Q ss_pred chhHHHHHHHhhcCCeEEEEec------CeeEEEecCHHHHHHHHhhCCccccCCcc
Q 041575 13 PTHRILGNMANKYGPIFTMKMG------VNRALVVSNSEITKECFTTNDKALASRPR 63 (263)
Q Consensus 13 ~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~~p~~~~~i~~~~~~~~~~~~~ 63 (263)
-....+.++...||+|..+.+. +.-+|.+.+++.++..+.-++..+..++.
T Consensus 16 tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~V 72 (260)
T PLN03120 16 ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQSV 72 (260)
T ss_pred CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCceE
Confidence 3456778888899999998872 34688999999999999766666655554
No 35
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=61.64 E-value=23 Score=28.33 Aligned_cols=49 Identities=14% Similarity=0.229 Sum_probs=34.9
Q ss_pred hhHHHHHHHhhcCCeEEEEecCe---------eEEEecCHHHHHHHHhh-CCccccCCc
Q 041575 14 THRILGNMANKYGPIFTMKMGVN---------RALVVSNSEITKECFTT-NDKALASRP 62 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~~~---------~~v~i~~p~~~~~i~~~-~~~~~~~~~ 62 (263)
-.+.+.++..+||+|.++.+... -+|...+++.+...+.. ++..+..|+
T Consensus 282 ~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr~ 340 (352)
T TIGR01661 282 DETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNRV 340 (352)
T ss_pred CHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 45678888999999998876422 38889999988887754 444444443
No 36
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=58.80 E-value=40 Score=23.14 Aligned_cols=40 Identities=8% Similarity=0.082 Sum_probs=31.5
Q ss_pred hhHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 53 (263)
..+.+.++.++||+|..+.+. +--+|-..+++.++.++..
T Consensus 47 te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 47 DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred CHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456788888999999887662 2357889999999999854
No 37
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=57.35 E-value=33 Score=19.30 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=33.8
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEecC--------eeEEEecCHHHHHHHHhh
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGV--------NRALVVSNSEITKECFTT 53 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~--------~~~v~i~~p~~~~~i~~~ 53 (263)
+||++.- -..+.+.++.++||++..+.+.. --.|...+++.++.++..
T Consensus 3 v~nlp~~----~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~ 58 (70)
T PF00076_consen 3 VGNLPPD----VTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEE 58 (70)
T ss_dssp EESETTT----SSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EcCCCCc----CCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHH
Confidence 4566532 23567788888999987766532 237888999999999863
No 38
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=57.24 E-value=35 Score=22.85 Aligned_cols=40 Identities=15% Similarity=0.245 Sum_probs=31.1
Q ss_pred CchhHHHHHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhh
Q 041575 12 EPTHRILGNMANKYGPIFTMKMGVNRALVVSNSEITKECFTT 53 (263)
Q Consensus 12 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~ 53 (263)
.+....+.+|.++||.+--. .+...+...|++.+.++...
T Consensus 74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 56677899999999965442 13668889999999999843
No 39
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=55.82 E-value=26 Score=24.94 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=30.9
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEec----CeeEEEecCHHHHHHHH
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMG----VNRALVVSNSEITKECF 51 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i~ 51 (263)
+|||..- ..-.-++..+.+|||+..+|+. +.-+|=+-||..+.+..
T Consensus 15 VGnL~~~----a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DAv 64 (195)
T KOG0107|consen 15 VGNLGSR----ATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDAV 64 (195)
T ss_pred eccCCCC----cchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHHH
Confidence 4555432 2334567888899999999973 33477777887776654
No 40
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=53.46 E-value=59 Score=20.97 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=30.3
Q ss_pred hHHHHHHHhhcCCeEEEEecC------eeEEEecCHHHHHHHHhh
Q 041575 15 HRILGNMANKYGPIFTMKMGV------NRALVVSNSEITKECFTT 53 (263)
Q Consensus 15 ~~~~~~~~~~yG~i~~~~~~~------~~~v~i~~p~~~~~i~~~ 53 (263)
.+-+-++.-+||+|..|++|. .-+||-.|-..++..+.+
T Consensus 32 seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 32 SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 455677888999999999974 357888888888887743
No 41
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=52.76 E-value=48 Score=20.21 Aligned_cols=37 Identities=8% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCe---EEEEecCeeEEEecCH-----HHHHHHHh
Q 041575 16 RILGNMANKYGPI---FTMKMGVNRALVVSNS-----EITKECFT 52 (263)
Q Consensus 16 ~~~~~~~~~yG~i---~~~~~~~~~~v~i~~p-----~~~~~i~~ 52 (263)
+...++++.|.++ +++..++.+.+.|++. +.+.+|++
T Consensus 24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq 68 (81)
T PRK10597 24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ 68 (81)
T ss_pred HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence 4556678889877 8999998888887544 56666664
No 42
>smart00362 RRM_2 RNA recognition motif.
Probab=52.34 E-value=40 Score=18.70 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=28.8
Q ss_pred hhHHHHHHHhhcCCeEEEEec-------CeeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMG-------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 53 (263)
....+.++.++||++..+.+. +.-.|-..+++.++.++..
T Consensus 12 ~~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 12 TEEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred CHHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 355677788899998777653 2336777889888888743
No 43
>COG3657 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.25 E-value=16 Score=22.75 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=21.9
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEecC
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMGV 35 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~ 35 (263)
+||.-+. +...+-+.+++-.|||=+|+++..
T Consensus 37 ~GN~GD~---kpvgeGV~ELRId~GpGyRvY~~~ 67 (100)
T COG3657 37 LGNFGDV---KPVGEGVSELRIDHGPGYRVYFQQ 67 (100)
T ss_pred cCCCcCc---cccccchhhheeccCCceEEEEEe
Confidence 3555544 345667888888899989988854
No 44
>KOG0109 consensus RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains [RNA processing and modification; General function prediction only]
Probab=44.83 E-value=42 Score=26.05 Aligned_cols=48 Identities=17% Similarity=0.346 Sum_probs=35.7
Q ss_pred CcccccccCCCCchhHHHHHHHhhcCCeEEEEe-cCeeEEEecCHHHHHHHHh
Q 041575 1 MIGHLHLFGGPEPTHRILGNMANKYGPIFTMKM-GVNRALVVSNSEITKECFT 52 (263)
Q Consensus 1 llG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~ 52 (263)
++||++. +..+.-+..++++||.|.-..+ -+-.+|+|-|-.+.+.+..
T Consensus 6 FIGNLp~----~~~~~elr~lFe~ygkVlECDIvKNYgFVHiEdktaaedair 54 (346)
T KOG0109|consen 6 FIGNLPR----EATEQELRSLFEQYGKVLECDIVKNYGFVHIEDKTAAEDAIR 54 (346)
T ss_pred hccCCCc----ccchHHHHHHHHhhCceEeeeeecccceEEeecccccHHHHh
Confidence 4677764 3446678888999998887654 3456899988888887775
No 45
>PF14259 RRM_6: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=39.74 E-value=67 Score=18.22 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=30.0
Q ss_pred hHHHHHHHhhcCCeEEEEecC--------eeEEEecCHHHHHHHHhhC
Q 041575 15 HRILGNMANKYGPIFTMKMGV--------NRALVVSNSEITKECFTTN 54 (263)
Q Consensus 15 ~~~~~~~~~~yG~i~~~~~~~--------~~~v~i~~p~~~~~i~~~~ 54 (263)
.+.+.++...||+|-.+.+.. .-+|-+.+++.++.++...
T Consensus 12 ~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~ 59 (70)
T PF14259_consen 12 EEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELL 59 (70)
T ss_dssp HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHC
Confidence 466777888899887776522 2378889999999998654
No 46
>KOG0149 consensus Predicted RNA-binding protein SEB4 (RRM superfamily) [General function prediction only]
Probab=38.19 E-value=1.4e+02 Score=22.51 Aligned_cols=45 Identities=9% Similarity=0.130 Sum_probs=33.0
Q ss_pred chhHHHHHHHhhcCCeEEEEe---------cCeeEEEecCHHHHHHHHhhCCcc
Q 041575 13 PTHRILGNMANKYGPIFTMKM---------GVNRALVVSNSEITKECFTTNDKA 57 (263)
Q Consensus 13 ~~~~~~~~~~~~yG~i~~~~~---------~~~~~v~i~~p~~~~~i~~~~~~~ 57 (263)
..-+.+.+..++||.|+-..+ -+-.+|.+.|++.+...+.+....
T Consensus 24 T~~~~l~~yFeqfGeI~eavvitd~~t~rskGyGfVTf~d~~aa~rAc~dp~pi 77 (247)
T KOG0149|consen 24 THKETLRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFRDAEAATRACKDPNPI 77 (247)
T ss_pred cchHHHHHHHHHhCceEEEEEEeccCCccccceeeEEeecHHHHHHHhcCCCCc
Confidence 345678889999999876443 134589999999999999654433
No 47
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=36.72 E-value=40 Score=18.61 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=15.0
Q ss_pred cCCeEEEEecCeeEEEec
Q 041575 25 YGPIFTMKMGVNRALVVS 42 (263)
Q Consensus 25 yG~i~~~~~~~~~~v~i~ 42 (263)
-|++++++=|+|.+.|..
T Consensus 3 ~GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 3 IGDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCCEEEEccCCCCeEEEE
Confidence 389999999999887763
No 48
>smart00360 RRM RNA recognition motif.
Probab=36.59 E-value=75 Score=17.35 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=27.6
Q ss_pred hhHHHHHHHhhcCCeEEEEecC---------eeEEEecCHHHHHHHHh
Q 041575 14 THRILGNMANKYGPIFTMKMGV---------NRALVVSNSEITKECFT 52 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~~---------~~~v~i~~p~~~~~i~~ 52 (263)
..+.+.++.+.||++..+.+.. .-.|...+++.+..++.
T Consensus 9 ~~~~l~~~f~~~g~v~~~~i~~~~~~~~~~~~a~v~f~~~~~a~~a~~ 56 (71)
T smart00360 9 TEEELRELFSKFGKIESVRLVRDKDTGKSKGFAFVEFESEEDAEKALE 56 (71)
T ss_pred CHHHHHHHHHhhCCEeEEEEEeCCCCCCCCceEEEEeCCHHHHHHHHH
Confidence 3456777888999988776532 23567788888888764
No 49
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=36.58 E-value=1.1e+02 Score=24.88 Aligned_cols=40 Identities=20% Similarity=0.247 Sum_probs=30.7
Q ss_pred hhHHHHHHHhhcCCeEEEEecC---------eeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMGV---------NRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~~---------~~~v~i~~p~~~~~i~~~ 53 (263)
..+.+.++.++||.|..+.+.. .-+|-..+++.+++.+..
T Consensus 206 tee~L~~~F~~fG~V~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 254 (346)
T TIGR01659 206 TDDQLDTIFGKYGQIVQKNILRDKLTGTPRGVAFVRFNKREEAQEAISA 254 (346)
T ss_pred cHHHHHHHHHhcCCEEEEEEeecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3567888999999998776632 237889999999988854
No 50
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=34.39 E-value=52 Score=23.16 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=29.5
Q ss_pred CchhHHHHHHHhhcC-CeEEEEecC-ee---EEEecCHHHHHH
Q 041575 12 EPTHRILGNMANKYG-PIFTMKMGV-NR---ALVVSNSEITKE 49 (263)
Q Consensus 12 ~~~~~~~~~~~~~yG-~i~~~~~~~-~~---~v~i~~p~~~~~ 49 (263)
....+..+++++++| |+..+.+++ -| -++++||-.+--
T Consensus 154 GkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGv 196 (218)
T COG1707 154 GKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGV 196 (218)
T ss_pred chHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhh
Confidence 678889999999999 999998755 33 468888866543
No 51
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=31.36 E-value=52 Score=28.34 Aligned_cols=26 Identities=12% Similarity=0.423 Sum_probs=21.1
Q ss_pred chhHHHHHHHhhcCCeEEEEecCeeE
Q 041575 13 PTHRILGNMANKYGPIFTMKMGVNRA 38 (263)
Q Consensus 13 ~~~~~~~~~~~~yG~i~~~~~~~~~~ 38 (263)
.....|.++.++||||+-+.+.++.-
T Consensus 294 af~kHF~~L~~~YG~v~vvNLl~tK~ 319 (570)
T COG5329 294 AFDKHFDKLREKYGDVYVVNLLKTKG 319 (570)
T ss_pred HHHHHHHHHHHHcCCEEEEEcccCCc
Confidence 45678899999999999998866544
No 52
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=31.07 E-value=1.7e+02 Score=23.77 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=30.2
Q ss_pred hhHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 53 (263)
..+.+.++.++||+|..+++. +.-+|-..+++.++..+..
T Consensus 120 te~~L~~lF~~~G~V~~v~i~~d~~tg~srGyaFVeF~~~e~A~~Ai~~ 168 (346)
T TIGR01659 120 TDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFGSEADSQRAIKN 168 (346)
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCccCcEEEEEEccHHHHHHHHHH
Confidence 356788888899999877662 2357888899999888743
No 53
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=30.73 E-value=1.4e+02 Score=23.93 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=34.4
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhh
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 53 (263)
+|||+. .-....+.++..+||+|..+.+. +--+|-..+++.+...+..
T Consensus 8 V~nLp~----~~~e~~l~~~F~~~G~i~~v~i~~d~~~g~s~g~afV~f~~~~~A~~Ai~~ 64 (352)
T TIGR01661 8 VNYLPQ----TMTQEEIRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVRPEDAEKAVNS 64 (352)
T ss_pred EeCCCC----CCCHHHHHHHHHccCCEEEEEEEEcCCCCccceEEEEEECcHHHHHHHHhh
Confidence 566643 22356788889999999887762 2357888999999888743
No 54
>PF14198 TnpV: Transposon-encoded protein TnpV
Probab=30.02 E-value=1.6e+02 Score=19.22 Aligned_cols=60 Identities=13% Similarity=0.226 Sum_probs=32.5
Q ss_pred hHHHHHhHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCC---cceehhHHHHHH
Q 041575 85 YWRETRKIATVELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGK---VSVEMKHWLEGT 144 (263)
Q Consensus 85 ~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~d~~~~~~~~ 144 (263)
.++.+|+..-..+.....+..+...+++.|.+.++.+.+...+..+-+ +.-|...|++++
T Consensus 33 yLke~~p~~Y~~ll~~g~L~~~l~eid~~A~e~~e~l~~q~~~~~gvtE~LK~~dqm~wv~~m 95 (111)
T PF14198_consen 33 YLKEHKPILYNNLLLSGKLNEHLAEIDEQAQERFERLVEQMAEKEGVTEELKAEDQMEWVRRM 95 (111)
T ss_pred HHHHhHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHhhhhcCHHHHHHHH
Confidence 344555544444445556777777778888877777653332111111 234555665554
No 55
>PF14605 Nup35_RRM_2: Nup53/35/40-type RNA recognition motif
Probab=29.63 E-value=1e+02 Score=16.81 Aligned_cols=37 Identities=5% Similarity=0.056 Sum_probs=23.4
Q ss_pred chhHHHHHHHhhcCCeEEEEec-CeeEEEec--CHHHHHH
Q 041575 13 PTHRILGNMANKYGPIFTMKMG-VNRALVVS--NSEITKE 49 (263)
Q Consensus 13 ~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~--~p~~~~~ 49 (263)
+....+.+....+|.|..+.+. ..+.+.+. ++..++.
T Consensus 12 ~~~~~vl~~F~~fGeI~~~~~~~~~~~~~l~y~~~~~ae~ 51 (53)
T PF14605_consen 12 DLAEEVLEHFASFGEIVDIYVPESTNWMYLKYKSRKDAEK 51 (53)
T ss_pred hHHHHHHHHHHhcCCEEEEEcCCCCcEEEEEECCHHHHHh
Confidence 3344455555679999999887 35555554 6655544
No 56
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism]
Probab=28.18 E-value=2.9e+02 Score=22.24 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=49.5
Q ss_pred CCChhHHHHHhHHH----------hhcCChhHHHHhHHHHHHHHHHHHHHHHHhccccCCCCcceehhHHHHHHHHHHHH
Q 041575 81 PYGSYWRETRKIAT----------VELLSNHRLEKLKHVRESEVTASIKGLFKDCQNSATGKVSVEMKHWLEGTTFDIII 150 (263)
Q Consensus 81 ~~g~~w~~~Rk~~~----------~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~vi~ 150 (263)
++|..|.-.=.++. +..++..+.+++..+......++...+......+++++...+..+.+..-.+.+||
T Consensus 143 ~DGGqw~MfvNlVkKYGviPKkcy~~sysT~atrkmN~iL~~KlREfa~~Lr~~~~~~~~~~~i~~t~~emm~eiFrvic 222 (457)
T KOG4128|consen 143 PDGGQWQMFVNLVKKYGVIPKKCYLHSYSTQATRKMNLILKSKLREFASMLRAQFTFNGNGCRIPDTIQEMMPEIFRVIC 222 (457)
T ss_pred CCCchHHHHHHHHHHhCCCcHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHh
Confidence 45777864433333 22355666777888877777888777765554445555566666666667777777
Q ss_pred HHHHccccC
Q 041575 151 RIIEGKRYT 159 (263)
Q Consensus 151 ~~~fG~~~~ 159 (263)
-+ +|.+..
T Consensus 223 ic-lg~PPe 230 (457)
T KOG4128|consen 223 IC-LGEPPE 230 (457)
T ss_pred hh-cCCCcc
Confidence 54 676543
No 57
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.42 E-value=1.6e+02 Score=18.29 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=25.9
Q ss_pred HHHHhhcCCeEEEEecCeeEEEecCHHHHHHHHhh
Q 041575 19 GNMANKYGPIFTMKMGVNRALVVSNSEITKECFTT 53 (263)
Q Consensus 19 ~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~ 53 (263)
.+--++||+|+...--..-.+.-++-+.+.+++.+
T Consensus 19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 34446799999885444557788888999999854
No 58
>KOG0105 consensus Alternative splicing factor ASF/SF2 (RRM superfamily) [RNA processing and modification]
Probab=25.64 E-value=1.1e+02 Score=22.16 Aligned_cols=47 Identities=15% Similarity=0.223 Sum_probs=30.3
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEe----cCee--EEEecCHHHHHHHHh
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKM----GVNR--ALVVSNSEITKECFT 52 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~----~~~~--~v~i~~p~~~~~i~~ 52 (263)
+|||+--.+ ..-++.++-|||+|.-|-+ ++++ +|-+-||..++...-
T Consensus 11 vGNLP~diR----ekeieDlFyKyg~i~~ieLK~r~g~ppfafVeFEd~RDAeDAiy 63 (241)
T KOG0105|consen 11 VGNLPGDIR----EKEIEDLFYKYGRIREIELKNRPGPPPFAFVEFEDPRDAEDAIY 63 (241)
T ss_pred ecCCCcchh----hccHHHHHhhhcceEEEEeccCCCCCCeeEEEecCccchhhhhh
Confidence 577763221 2346777789999998876 3344 456678887776553
No 59
>COG1610 Uncharacterized conserved protein [Function unknown]
Probab=25.46 E-value=75 Score=21.85 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=8.7
Q ss_pred CCCchhhhhhhc
Q 041575 251 DSDADTVIKALC 262 (263)
Q Consensus 251 ~~l~~~~i~~~~ 262 (263)
..|+++||...|
T Consensus 93 ~qLsd~e~~~~v 104 (148)
T COG1610 93 QQLSEDELRALV 104 (148)
T ss_pred ccCCHHHHHHHH
Confidence 468888887654
No 60
>TIGR01642 U2AF_lg U2 snRNP auxilliary factor, large subunit, splicing factor. Members of this subfamily are found in plants, metazoa and fungi.
Probab=25.14 E-value=2.1e+02 Score=24.39 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=33.5
Q ss_pred HHHHHHHhhcCCeEEEEecC------------eeEEEecCHHHHHHHHhh-CCccccCCc
Q 041575 16 RILGNMANKYGPIFTMKMGV------------NRALVVSNSEITKECFTT-NDKALASRP 62 (263)
Q Consensus 16 ~~~~~~~~~yG~i~~~~~~~------------~~~v~i~~p~~~~~i~~~-~~~~~~~~~ 62 (263)
+-+.+...+||+|..+.+.. .-+|...+++.++..+.. ++..|..+.
T Consensus 434 edl~~~f~~~G~v~~v~i~~~~~~~~~~~~~G~~fV~F~~~e~A~~A~~~lnGr~~~gr~ 493 (509)
T TIGR01642 434 EDVKTEFSKYGPLINIVIPRPNGDRNSTPGVGKVFLEYADVRSAEKAMEGMNGRKFNDRV 493 (509)
T ss_pred HHHHHHHHhcCCeeEEEeeccCcCCCcCCCcceEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 45677889999999887632 237889999999988854 344454443
No 61
>TIGR01649 hnRNP-L_PTB hnRNP-L/PTB/hephaestus splicing factor family. Included in this family of heterogeneous ribonucleoproteins are PTB (polypyrimidine tract binding protein ) and hnRNP-L. These proteins contain four RNA recognition motifs (rrm: pfam00067).
Probab=24.59 E-value=2.4e+02 Score=24.05 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=32.1
Q ss_pred hHHHHHHHhhcCCeEEEEec----CeeEEEecCHHHHHHHHhh
Q 041575 15 HRILGNMANKYGPIFTMKMG----VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 15 ~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i~~~ 53 (263)
.+.+.++...||+|.++.+. +.-+|-..+++.+..++..
T Consensus 290 ~~~L~~lF~~yG~V~~vki~~~~~g~afV~f~~~~~A~~Ai~~ 332 (481)
T TIGR01649 290 CDRLFNLFCVYGNVERVKFMKNKKETALIEMADPYQAQLALTH 332 (481)
T ss_pred HHHHHHHHHhcCCeEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 46788899999999998873 4568899999999988854
No 62
>TIGR01622 SF-CC1 splicing factor, CC1-like family. A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the model.
Probab=23.88 E-value=2.4e+02 Score=23.69 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=32.0
Q ss_pred HHHHHHHhhcCCeEEEEec-----CeeEEEecCHHHHHHHHhh-CCccccCCc
Q 041575 16 RILGNMANKYGPIFTMKMG-----VNRALVVSNSEITKECFTT-NDKALASRP 62 (263)
Q Consensus 16 ~~~~~~~~~yG~i~~~~~~-----~~~~v~i~~p~~~~~i~~~-~~~~~~~~~ 62 (263)
+-+.+...+||+|..+.+. +.-+|-..+++.+...... ++..|..+.
T Consensus 387 ~dv~~e~~k~G~v~~v~v~~~~~~G~~fV~F~~~e~A~~A~~~lnGr~f~gr~ 439 (457)
T TIGR01622 387 DDVKEECSKYGGVVHIYVDTKNSAGKIYLKFSSVDAALAAFQALNGRYFGGKM 439 (457)
T ss_pred HHHHHHHHhcCCeeEEEEeCCCCceeEEEEECCHHHHHHHHHHhcCcccCCeE
Confidence 4566778899999888763 3446678888888888754 344444443
No 63
>TIGR01622 SF-CC1 splicing factor, CC1-like family. A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the model.
Probab=23.12 E-value=2.9e+02 Score=23.20 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=34.3
Q ss_pred hHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhhCCccccCC
Q 041575 15 HRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTTNDKALASR 61 (263)
Q Consensus 15 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~~~~~~~ 61 (263)
...+.++..+||+|..+.+. +.-+|-+.+++.+...+.-++..+..+
T Consensus 103 ~~~l~~~F~~~G~v~~v~i~~d~~~~~skg~afVeF~~~e~A~~Al~l~g~~~~g~ 158 (457)
T TIGR01622 103 ERDLYEFFSKVGKVRDVQCIKDRNSRRSKGVAYVEFYDVESVIKALALTGQMLLGR 158 (457)
T ss_pred HHHHHHHHHhcCCeeEEEEeecCCCCCcceEEEEEECCHHHHHHHHHhCCCEECCe
Confidence 45678888999999877762 234888999999999986555444433
No 64
>PRK02302 hypothetical protein; Provisional
Probab=22.80 E-value=2e+02 Score=17.93 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=22.6
Q ss_pred HhhcCCeEEEEecCeeEEEecCHHHHHHHHhh
Q 041575 22 ANKYGPIFTMKMGVNRALVVSNSEITKECFTT 53 (263)
Q Consensus 22 ~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~ 53 (263)
-++||+|+.+.-=..-.++=.|-+.++++..+
T Consensus 23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 45799999874333446777788888888754
No 65
>KOG3718 consensus Carnitine O-acyltransferase CROT [Lipid transport and metabolism]
Probab=22.75 E-value=2.7e+02 Score=23.73 Aligned_cols=68 Identities=21% Similarity=0.196 Sum_probs=39.6
Q ss_pred eEEEEecCeeEEEecCHHHHHHHHhhCCccccCCcchhhhhhhhcCccccccCCCChhHHHHHhHHHhhcCChhHHHHh
Q 041575 28 IFTMKMGVNRALVVSNSEITKECFTTNDKALASRPRRMAMEILGYNFLATPSSPYGSYWRETRKIATVELLSNHRLEKL 106 (263)
Q Consensus 28 i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~ 106 (263)
.+.+........+++.|+.+..++.-. +..+..|... .+ .-+.+.+.+.|.+.|.-+.. . +++++.-+
T Consensus 200 ~fkfd~~hEdd~~l~~peel~nllk~~-k~~ssep~gc---~v-----~~LTs~eRd~WA~nRe~Li~-~-s~aN~ell 267 (609)
T KOG3718|consen 200 QFKFDCVHEDDTILSAPEELVNLLKVR-KILSSEPLGC---CV-----PTLTSDERDTWARNRERLIE-I-SVANKELL 267 (609)
T ss_pred EEEEEeeccCCcccCCHHHHHHHHHHH-HhccCCCCCc---ch-----hccccccccHHHHHHHHHHh-c-ChhhHHHH
Confidence 344444455566788899999888432 2222222211 11 22445557899999999884 4 77766543
No 66
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=22.62 E-value=77 Score=23.25 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=24.2
Q ss_pred cCCeEEEEecCeeEEEecCHHHHHHHHhh
Q 041575 25 YGPIFTMKMGVNRALVVSNSEITKECFTT 53 (263)
Q Consensus 25 yG~i~~~~~~~~~~v~i~~p~~~~~i~~~ 53 (263)
|..+.-+..|+..+++..|++.+++++.-
T Consensus 136 y~~l~plfvgnh~ill~~d~~kik~~lri 164 (245)
T KOG4241|consen 136 YSSLNPLFVGNHAILLAKDISKIKSILRI 164 (245)
T ss_pred hhhhhhheeccceEEEcCChHHHHHHHHH
Confidence 55566677888999999999999999953
No 67
>TIGR01648 hnRNP-R-Q heterogeneous nuclear ribonucleoprotein R, Q family. Sequences in this subfamily include the human heterogeneous nuclear ribonucleoproteins (hnRNP) R, Q and APOBEC-1 complementation factor (aka APOBEC-1 stimulating protein). These proteins contain three RNA recognition domains (rrm: pfam00076) and a somewhat variable C-terminal domain.
Probab=21.96 E-value=2.9e+02 Score=24.41 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=31.6
Q ss_pred hhHHHHHHHhhcCCeEEEEec--------CeeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMG--------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~ 53 (263)
..+.+.++.+++|+|+.+.+. +--+|...+++.++..+..
T Consensus 71 tEd~L~~~F~~~G~I~~vrl~~D~sG~sRGfaFV~F~~~e~A~~Ai~~ 118 (578)
T TIGR01648 71 YEDELVPLFEKAGPIYELRLMMDFSGQNRGYAFVTFCGKEEAKEAVKL 118 (578)
T ss_pred CHHHHHHHHHhhCCEEEEEEEECCCCCccceEEEEeCCHHHHHHHHHH
Confidence 456778888999999988762 2358999999999998854
No 68
>COG1843 FlgD Flagellar hook capping protein [Cell motility and secretion]
Probab=21.07 E-value=70 Score=23.96 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=21.6
Q ss_pred CCcHHHHHHhccccccccCCCCCchhhhhhhc
Q 041575 231 DEDFIYVMLSLLYDNAKQLPDSDADTVIKALC 262 (263)
Q Consensus 231 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 262 (263)
.+|||..|+...... +|-.++...|+++++
T Consensus 31 kd~FLkLLiaQLknQ--DPtnPmd~~q~isQm 60 (222)
T COG1843 31 KDDFLKLLIAQLKNQ--DPTNPMDNTEFISQL 60 (222)
T ss_pred HHHHHHHHHHHHhcC--CCCCCCchhHHHHHH
Confidence 468999888765544 456788888887764
No 69
>TIGR01645 half-pint poly-U binding splicing factor, half-pint family. In the case of PUF60 (GP|6176532), in complex with p54, and in the presence of U2AF, facilitates association of U2 snRNP with pre-mRNA.
Probab=20.93 E-value=3.2e+02 Score=24.30 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=31.6
Q ss_pred hhHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhh
Q 041575 14 THRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 14 ~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 53 (263)
..+.+.++..+||+|..+.+. +--+|-..+++.+...+..
T Consensus 120 tEe~Lr~lF~~fG~I~sV~I~~D~~TgkskGfAFVeF~s~e~A~~Ai~~ 168 (612)
T TIGR01645 120 REDTIRRAFDPFGPIKSINMSWDPATGKHKGFAFVEYEVPEAAQLALEQ 168 (612)
T ss_pred CHHHHHHHHHccCCEEEEEEeecCCCCCcCCeEEEEeCcHHHHHHHHHh
Confidence 456788888999999888762 2358899999999998853
No 70
>PF01707 Peptidase_C9: Peptidase family C9; InterPro: IPR002620 The family of alphaviruses includes 26 known members. They infect a variety of hosts including mosquitoes, birds, rodents and other mammals with worldwide distribution. Alphaviruses also pose a potential threat to human health in many area. For example, Venezuelan Equine Encephalitis Virus (VEEV) causes encephalitis in humans as well as livestock in Central and South America, and some variants of Sinbis Virus (SIN) and Semliki Forest Virus (SFV) have been found to cause fever and arthritis in humans []. Alphaviruses possess a single-stranded RNA genome of approximately 12 kb. The genomic RNA of alphaviruses is translated into two polyproteins that, respectively, encode structural proteins and nonstructural proteins. The nonstructural proteins may be translated as one or two polyproteins, nsp123 or nsp1234, depending on the virus. These polyproteins are cleaved to generate nsp1, nsp2, nsp3 and nsp4 by a protease activity that resides within nsp2 []. The nsp2 protein of alphaviruses has multiple enzymatic acivities. Its N-terminal domain has been shown to possess ATPase and GTPase activity, RNA helicase activity and RNA 5'-triphosphatase activity []. The C-terminal nsp2pro domain of nsp2 is responsible for the regulation of 26S subgenome RNA synthesis, switching between negative- and positive-strand RNA synthesis, targeting nsp2 for nuclear transport and proteolytic processing of the nonstructural polyprotein [, ]. The nsp2pro domain is a member of peptidase family C9 of clan CA. The nsp2pro domain consists of two distinct subdomains. The nsp2pro N-terminal subdomain is largely alpha-helical and contains the catalytic dyad cysteine and histidine residues organised in a protein fold that differs significantly from any known cysteine protease or protein folds. The nsp2pro C-terminal subdomain displays structural similarity to S-adenosyl- L-methionine-dependent RNA methyltransferases and provides essential elements that contribute to substrate recognition and may also regulate the structure of the substrate binding cleft []. This entry represents the nsp2pro domain.; PDB: 3TRK_A 2HWK_A.
Probab=20.68 E-value=89 Score=22.59 Aligned_cols=22 Identities=14% Similarity=0.096 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHccccCC
Q 041575 139 HWLEGTTFDIIIRIIEGKRYTS 160 (263)
Q Consensus 139 ~~~~~~~~~vi~~~~fG~~~~~ 160 (263)
.+.-.+++|.||.-+||.+++.
T Consensus 83 a~S~e~ALn~ictr~fG~DLdS 104 (202)
T PF01707_consen 83 AYSPEVALNEICTRFFGVDLDS 104 (202)
T ss_dssp ---HHHHHHHHHHHHHSS-GGG
T ss_pred ccCHHHHHHHHHHHHhccccCc
Confidence 4556789999999999999865
No 71
>PF11616 EZH2_WD-Binding: WD repeat binding protein EZH2; InterPro: IPR021654 This family of proteins represents Enhancer of zest homologue 2, (EZH2) a 30 residue peptide which binds to a WD-repeat domain of EED by residues 39-68. EED is a component of PRC2 complex which is involved in gene expression []. This interaction is required for the HMTase activity of PCR2 []. ; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 2QXV_B.
Probab=20.57 E-value=54 Score=15.50 Aligned_cols=8 Identities=25% Similarity=0.808 Sum_probs=4.3
Q ss_pred ChhHHHHH
Q 041575 83 GSYWRETR 90 (263)
Q Consensus 83 g~~w~~~R 90 (263)
.++|+.+|
T Consensus 19 N~eWk~lR 26 (30)
T PF11616_consen 19 NEEWKKLR 26 (30)
T ss_dssp HHHHHH--
T ss_pred HHHHHHhc
Confidence 46788776
No 72
>TIGR01628 PABP-1234 polyadenylate binding protein, human types 1, 2, 3, 4 family. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed, or of unknown tissue range.
Probab=20.42 E-value=2.9e+02 Score=24.08 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=34.7
Q ss_pred cccccccCCCCchhHHHHHHHhhcCCeEEEEec---------CeeEEEecCHHHHHHHHhh
Q 041575 2 IGHLHLFGGPEPTHRILGNMANKYGPIFTMKMG---------VNRALVVSNSEITKECFTT 53 (263)
Q Consensus 2 lG~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 53 (263)
+|||..- -....+.++.++||+|..+++. +.-.|...+++.++..+..
T Consensus 5 VgnLp~~----vte~~L~~~F~~~G~v~~v~v~~d~~t~~s~G~afV~F~~~~~A~~Al~~ 61 (562)
T TIGR01628 5 VGDLDPD----VTEAKLYDLFKPFGPVLSVRVCRDSVTRRSLGYGYVNFQNPADAERALET 61 (562)
T ss_pred EeCCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 5666532 2245677788899999888763 2357889999999999854
No 73
>COG5475 Uncharacterized small protein [Function unknown]
Probab=20.22 E-value=1.2e+02 Score=16.85 Aligned_cols=17 Identities=35% Similarity=0.429 Sum_probs=13.3
Q ss_pred cCCeEEEEecCeeEEEe
Q 041575 25 YGPIFTMKMGVNRALVV 41 (263)
Q Consensus 25 yG~i~~~~~~~~~~v~i 41 (263)
-|++++++-|+|.++|.
T Consensus 7 tgdvV~lKsGGP~Mtvs 23 (60)
T COG5475 7 TGDVVTLKSGGPRMTVS 23 (60)
T ss_pred cCcEEEeecCCceEEEe
Confidence 38999999988877653
No 74
>cd01403 Cyt_c_Oxidase_VIIb Cytochrome C oxidase chain VIIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. The VIIb subunit is found only in eukaryotes and its specific function remains unclear. A rare polymorphism of the CcO VIIb gene may be associated with the high risk of nasopharyngeal carcinoma in a Cantonese family.
Probab=20.17 E-value=71 Score=17.15 Aligned_cols=12 Identities=25% Similarity=0.623 Sum_probs=8.6
Q ss_pred HHHhhcCCeEEE
Q 041575 20 NMANKYGPIFTM 31 (263)
Q Consensus 20 ~~~~~yG~i~~~ 31 (263)
+.|.|||..+-+
T Consensus 4 ~FHdKYGn~~l~ 15 (51)
T cd01403 4 DFHDKYGNAVLI 15 (51)
T ss_pred chhhhcCceEEe
Confidence 568899976544
Done!