BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041577
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96JM2|ZN462_HUMAN Zinc finger protein 462 OS=Homo sapiens GN=ZNF462 PE=1 SV=3
Length = 2506
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 35/192 (18%)
Query: 29 SNKSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLR----DL----KMCINSTSKKA 80
++ S + C+ C + T DL H G+ H +L DL + C S +
Sbjct: 880 NDHSAVYRCLECYIDYTNFEDLQQHY-GEHHPEAMNVLNFDHSDLIYRCRFC--SYTSPN 936
Query: 81 TESRDSADQEMKPNVE-DESVKANKTVVGLDQKLEG-GQTLQVKPNSNPCGSDQKTATPP 138
S Q M P V+ + ++ + VV + L QTL+ NS P + T+TP
Sbjct: 937 VRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAP--KNMATSTPV 994
Query: 139 AGSGELPLT-NSNKPKEWS------------------CALCQVSAPTERGLDEHLQGRKH 179
A G LP T N N PK ++ C +C ++P + H Q +KH
Sbjct: 995 ARGGGLPATFNKNTPKTFTPECENQKDPLVNTVVVYDCDVCSFASPNMHSVLVHYQ-KKH 1053
Query: 180 KAKVAGLLRDKK 191
+ A R +K
Sbjct: 1054 PEEKASYFRIQK 1065
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 40/177 (22%)
Query: 31 KSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQE 90
K + SC +CQ+ ++ + H +G KH K K L K K S+DSA
Sbjct: 165 KKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALEATK-----NKPKMVPSKDSAKAN 219
Query: 91 ----MKPNVEDESVKANKTVVGLDQKLEGGQTLQVKPNSNPCGSDQKTATPPAGSGELPL 146
++P D S K+ E ++ +S P GS+ + +G+ LPL
Sbjct: 220 PSCSIRPGTGDSSDKS-----------EDKGKIKATSSSQPSGSEGGSFLLKSGTTPLPL 268
Query: 147 TNSNKP--------------------KEWSCALCQVSAPTERGLDEHLQGRKHKAKV 183
P K C+LC+V+ + L+ H G KHK V
Sbjct: 269 GAIASPSKSTNGAPGSVAESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMV 325
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 153 KEWSCALCQVSAPTERGLDEHLQGRKHKAKVAG 185
K + C +C V +E L +H+ R+HK +VAG
Sbjct: 358 KMFHCEICDVHVNSEIQLKQHISSRRHKDRVAG 390
>sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D OS=Rattus norvegicus GN=Znf385d PE=2 SV=1
Length = 395
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 31 KSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQE 90
K + SC +CQ+ ++ H +G KH K K L +K +K+ ++DSA
Sbjct: 76 KKQIISCNICQLRFNSDSQAAAHYKGTKHAKKLKALESMK-----NKQKSVTAKDSAKTT 130
Query: 91 MKPNVEDESVKANKTVVGLDQKLEGGQTLQVKPNSNPCGSDQKTATPPAGSGELPLT--- 147
S+ N D K E QV S + T + E LT
Sbjct: 131 F------TSITTNPITTSSD-KTESTAGTQVIARSADMRKSSEVTTELTSNAEKSLTAAV 183
Query: 148 ----NSNKPKE---------WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
NS+ P E C+LC+V+ + L+ H G KHK +
Sbjct: 184 AAGNNSSPPTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTML 232
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 129 GSDQKTATPPAGS-GELPLTNSN---KPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
GS A P AG G+ P+ N + K + C +C V +E L +H+ R+HK + +
Sbjct: 237 GSGTIKAFPRAGMKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAS 296
Query: 185 G 185
G
Sbjct: 297 G 297
>sp|Q9HA38|ZMAT3_HUMAN Zinc finger matrin-type protein 3 OS=Homo sapiens GN=ZMAT3 PE=1
SV=1
Length = 289
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 58/158 (36%), Gaps = 41/158 (25%)
Query: 37 CVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQE-----M 91
C LC S ++ H QGK H K LR + NS S+ + + A +E M
Sbjct: 149 CKLCDASFSSPAVAQAHYQGKNHA---KRLRLAEAQSNSFSESSELGQRRARKEGNEFKM 205
Query: 92 KPNVEDESVKANKTVVGLDQKLEGGQTLQVKPNSNP-----CGSDQKTATPPAGSGELPL 146
PN + N + P NP D P+G
Sbjct: 206 MPNRRNMYTVQNNSA---------------GPYFNPRSRQRIPRDLAMCVTPSG------ 244
Query: 147 TNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
++ C++C V A E +HL+ ++HK+KV+
Sbjct: 245 -------QFYCSMCNVGAGEEMEFRQHLESKQHKSKVS 275
>sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2 OS=Homo sapiens GN=ZFR2 PE=2 SV=3
Length = 939
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 39/222 (17%)
Query: 37 CVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKK-ATESRDSADQE----- 90
C LC VS T H++G KH+ KL L I + ATES A+ +
Sbjct: 321 CDLCAVSCTGADAYAAHIRGSKHQKVFKLHAKLGKPIPTLEPALATESPPGAEAKPTSPT 380
Query: 91 -------MKPNVEDESVKANKTVVGLDQ----------------KLEG-GQTLQVKPNSN 126
+P + V + G + KLEG G Q
Sbjct: 381 GPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQGGSKEA 440
Query: 127 PCGSDQKTATPPAGSGELPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
P G P E+ ++ + + C LC+ S D H++GR+H+
Sbjct: 441 PAGCSDAQPVGPEYVEEV-FSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHR------ 493
Query: 187 LRDKKRCSNSIPSTSKKSTESRDGVGQEMKTK--IQEESVNQ 226
L+ +K+ + +P ++ S+ +R + + M+ + + EE + Q
Sbjct: 494 LQYRKKVNPDLPIATEPSSRARKVLEERMRKQRHLAEERLEQ 535
>sp|A2A5E6|Z385C_MOUSE Zinc finger protein 385C OS=Mus musculus GN=Znf385c PE=2 SV=1
Length = 429
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKVAG 185
+ CALCQ+ +E L +H+ R+HK ++AG
Sbjct: 297 FHCALCQLHVNSETQLKQHMSSRRHKDRLAG 327
>sp|Q66K41|Z385C_HUMAN Zinc finger protein 385C OS=Homo sapiens GN=ZNF385C PE=2 SV=2
Length = 422
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKVAG 185
+ CALCQ+ +E L +H+ R+HK ++AG
Sbjct: 290 FHCALCQLQVNSETQLKQHMSSRRHKDRLAG 320
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 143 ELPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
E P N+ + SCALC +E H+ G++H+ KVA L
Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAEL 82
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 153 KEWSCALCQVSAPTERGLDEHLQGRKHKAKVAG 185
K + C +C V +E L +H+ R+HK +VAG
Sbjct: 346 KTFHCEICDVHVNSEIQLKQHISSRRHKDRVAG 378
>sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio GN=znf385b PE=2 SV=1
Length = 492
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 153 KEWSCALCQVSAPTERGLDEHLQGRKHKAKVAG 185
K + C +C V +E L +H+ R+HK +VAG
Sbjct: 369 KTFHCEICDVHVNSEIQLKQHISSRRHKDRVAG 401
>sp|Q8I7Z8|HAM_DROME Transcription factor hamlet OS=Drosophila melanogaster GN=ham PE=2
SV=1
Length = 990
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 30 NKSKEWSCVLCQVSATTERDLDVHLQGKKHKA----------------KEKLLRDLKMCI 73
NK + + C LC S + +LD H+ KKH++ +E+ D++ +
Sbjct: 869 NKERPFRCELCDRSFGQQTNLDRHV--KKHESEGNNFRDSPSSSGIAEREEYFDDIRKFM 926
Query: 74 NSTSKKATESRDSADQEMKPNVEDESVKANK 104
N + + + D E PN +D+SV K
Sbjct: 927 NRVYTPNSLAGNEGDTEEYPNSDDQSVNLEK 957
>sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sapiens GN=ZFHX2 PE=2 SV=3
Length = 2572
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 9 GSKQKAATPPAGSGELPSTSSNKSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLR 67
GS +A+ PP+ + P T S+ W C +C R+L +H+ +KH +L
Sbjct: 547 GSPPEASLPPSAGDKEPKTKSS----WQCKVCSYETNISRNLRIHMTSEKHMQNVLMLH 601
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 59/163 (36%), Gaps = 16/163 (9%)
Query: 30 NKSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQ 89
N K C C ++ LDVH++ K ++ C + +S +
Sbjct: 448 NSCKTLKCPKCNWHYKYQQTLDVHMREKHPESNSHC----SYCSAGGAHPRLARGESYNC 503
Query: 90 EMKPNVED-----ESVKANKTV-VGLDQKLEGGQTLQVKPNSNPCGSDQKTATPPAGSGE 143
KP D + K N ++ + D+ L Q Q P GS + + PP+ +
Sbjct: 504 GYKPYRCDVCNYSTTTKGNLSIHMQSDKHLANLQGFQAGPGGQ--GSPPEASLPPSAGDK 561
Query: 144 LPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
P T S+ W C +C R L H+ KH V L
Sbjct: 562 EPKTKSS----WQCKVCSYETNISRNLRIHMTSEKHMQNVLML 600
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 21 SGELPSTSSNKSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEK 64
+G P+T++ K + C +C+VS L++H++ H+ + +
Sbjct: 1234 AGAPPTTTAATDKPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSR 1277
>sp|Q0IIC4|ZMAT3_BOVIN Zinc finger matrin-type protein 3 OS=Bos taurus GN=ZMAT3 PE=2 SV=1
Length = 289
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 35/155 (22%)
Query: 37 CVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATES--RDSADQEMKPN 94
C LC S ++ H QGK H + +L + +S+ ++ + +M PN
Sbjct: 149 CKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSDSSEVGQRRTRKEGNEYKMMPN 208
Query: 95 VEDESVKANKTVVGLDQKLEGGQTLQVKPNSNP-----CGSDQKTATPPAGSGELPLTNS 149
+ N + P NP D P+G
Sbjct: 209 RRNMYAVQNNSA---------------GPYFNPRSRQRIPRDLAMCVTPSG--------- 244
Query: 150 NKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
++ C++C V A E +HL+ ++HK+KV+
Sbjct: 245 ----QFYCSMCNVGAGEEVEFRQHLESKQHKSKVS 275
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 143 ELPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
E P N+ + SCALC +E H+ G++H+ +VA L
Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAEL 82
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 143 ELPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
E P N+ + SCALC +E H+ G++H+ +VA L
Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAEL 82
>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1
Length = 3567
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 30/165 (18%)
Query: 1 PKPDTSV--CGSKQKAATPPAGSGELPSTSSNKSK-EWSCVLCQVSATTERDLDVHLQGK 57
P P+TS+ CG+ PS S K K W C +C R+L +H+ +
Sbjct: 744 PAPNTSLSGCGT--------------PSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSE 789
Query: 58 KHKAKEKLLRDLKMCINSTSKKATESRDSADQEMKPNVEDESVKANKTVVGLDQKLEGGQ 117
KH LL+ K+ + + + + N + G+ KLE
Sbjct: 790 KHMHNMMLLQ-------QNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGM--KLENPA 840
Query: 118 TLQVKPNSNPCGSDQKTATPPA-GSGEL-PLTNSNKPKEWSCALC 160
Q+ NP D TA A G GEL P + K + CA+C
Sbjct: 841 DPQLM--INPFQLDPATAAALAPGLGELSPYISDPALKLFQCAVC 883
>sp|P28167|ZFH2_DROME Zinc finger protein 2 OS=Drosophila melanogaster GN=zfh2 PE=1 SV=2
Length = 3005
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 8/163 (4%)
Query: 33 KEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQEMK 92
K + C +C S TT+ +L +H+Q KH + L + + + + A +
Sbjct: 612 KPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAAAAAVTGKLLLSSS-S 670
Query: 93 PNVEDESVKANKTVVGLDQKLEGGQTLQVKPNSNPCGSDQKTATPPAGSGELPLTNS--N 150
P V + + G G T + N+ P + ++ AGS TN+
Sbjct: 671 PQVTAACPSNSGSGAGSGSSNIVGGTASLSGNATPSVTGANSSNANAGSN----TNNAGT 726
Query: 151 KPK-EWSCALCQVSAPTERGLDEHLQGRKHKAKVAGLLRDKKR 192
KPK + C +C R L H+ KH +A L + K
Sbjct: 727 KPKPSFRCDICSYDTSVARNLRIHMTSEKHTHNMAVLQNNIKH 769
>sp|O73590|ZFHX4_CHICK Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2
Length = 3573
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 58/147 (39%), Gaps = 15/147 (10%)
Query: 18 PAGSG-ELPSTSSNKSK-EWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINS 75
PA SG PS S K K W C +C R+L +H+ +KH LL+
Sbjct: 744 PALSGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQ-------Q 796
Query: 76 TSKKATESRDSADQEMKPNVEDESVKANKTVVGLDQKLEGGQTLQVKPNSNPCGSDQKTA 135
K+ + + + + N + G+ KLE Q+ NP D TA
Sbjct: 797 NMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGM--KLENPADPQMM--INPFQLDPATA 852
Query: 136 TPPA-GSGEL-PLTNSNKPKEWSCALC 160
A G GEL P + K + CA+C
Sbjct: 853 AALAPGLGELSPYISDPALKLFQCAVC 879
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 58/172 (33%), Gaps = 66/172 (38%)
Query: 33 KEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATESRDSADQEMK 92
K + C +C S TT+ +L +H+Q KH +N+
Sbjct: 693 KPFRCEVCNYSTTTKGNLSIHMQSDKH-------------LNNV---------------- 723
Query: 93 PNVEDESVKANKTVVGLDQKLEGGQTLQVK----PNSNPCGSDQKTATPPAGSGELPLTN 148
Q L+ G QV P SNP S T +P
Sbjct: 724 ------------------QNLQNGNGEQVYGHTAPPSNPALSGCGTPSP----------- 754
Query: 149 SNKPKE---WSCALCQVSAPTERGLDEHLQGRKHKAKVAGLLRDKKRCSNSI 197
+KPK+ W C +C R L H+ KH + L ++ K+ +++
Sbjct: 755 -SKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNL 805
>sp|Q9H6B1|Z385D_HUMAN Zinc finger protein 385D OS=Homo sapiens GN=ZNF385D PE=2 SV=1
Length = 395
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 129 GSDQKTATPPAG-SGELPLTNSN---KPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
GS A P AG G+ P+ N + K + C +C V +E L +H+ R+HK + A
Sbjct: 237 GSGTIKAFPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAA 296
Query: 185 G 185
G
Sbjct: 297 G 297
>sp|Q28EG9|ZMAT1_XENTR Zinc finger matrin-type protein 1 OS=Xenopus tropicalis GN=zmat1
PE=2 SV=1
Length = 553
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 35 WSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMCINSTSKKATES 83
+ C +C ++ T+ H+QG KH+ KE ++ +L TSKK +S
Sbjct: 275 YVCPICNITLTSIEMYQSHMQGNKHQIKESMVANLM----KTSKKNYDS 319
>sp|Q1JPD6|STPAP_BOVIN Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Bos taurus
GN=TUT1 PE=2 SV=1
Length = 871
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
+ C LC ++ + LD HL GRKH+ V
Sbjct: 16 FRCCLCHITTANQPSLDAHLGGRKHRHLV 44
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 35 WSCVLCQVSATTERDLDVHLQGKKHK 60
+ C LC ++ + LD HL G+KH+
Sbjct: 16 FRCCLCHITTANQPSLDAHLGGRKHR 41
>sp|Q8R3F9|STPAP_MOUSE Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Mus
musculus GN=Tut1 PE=1 SV=1
Length = 869
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
+ C LC V+ LD HL+GRKH+ V
Sbjct: 16 FRCCLCDVTTANRPSLDAHLKGRKHRDLV 44
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 35 WSCVLCQVSATTERDLDVHLQGKKHK 60
+ C LC V+ LD HL+G+KH+
Sbjct: 16 FRCCLCDVTTANRPSLDAHLKGRKHR 41
>sp|Q3MHT4|STPAP_RAT Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Rattus
norvegicus GN=Tut1 PE=2 SV=1
Length = 866
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
+ C LC V+ LD HL+GRKH+ V
Sbjct: 16 FRCCLCDVTTANRPSLDAHLKGRKHRDLV 44
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 35 WSCVLCQVSATTERDLDVHLQGKKHK 60
+ C LC V+ LD HL+G+KH+
Sbjct: 16 FRCCLCDVTTANRPSLDAHLKGRKHR 41
>sp|A1L1R6|ZN423_DANRE Zinc finger protein 423 OS=Danio rerio GN=znf423 PE=2 SV=1
Length = 1365
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 31 KSKEWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLRDLKMC 72
K K + C+ CQ++ TER++ +H+ H +E + + K+C
Sbjct: 1245 KKKTYQCIKCQMTFETEREIQIHV--ANHMIEEGINHECKLC 1284
>sp|Q8BX22|SALL4_MOUSE Sal-like protein 4 OS=Mus musculus GN=Sall4 PE=1 SV=2
Length = 1067
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 33 KEWSCVLCQVSATTERDLDVHLQGKKH---KAKEKLLRDL--KMCINSTSKKATESRDSA 87
+ + C +C TT+ +L VHLQ +H KA +LL + K +++ S A A
Sbjct: 413 RPYVCPICGHRFTTKGNLKVHLQ--RHPEVKANPQLLAEFQDKGAVSAASHYALPVPVPA 470
Query: 88 DQEMKPNVEDESVKANKT-VVGLDQKLEGG 116
D E +V+ E V T +GL QKL G
Sbjct: 471 D-ESSLSVDAEPVPVTGTPSLGLPQKLTSG 499
>sp|D2HS90|STPAP_AILME Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Ailuropoda
melanoleuca GN=TUT1 PE=3 SV=1
Length = 869
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
+ C LC V+ LD HL GRKH+ V
Sbjct: 16 FRCCLCHVTTANRPSLDAHLGGRKHRHLV 44
>sp|Q9H6E5|STPAP_HUMAN Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Homo
sapiens GN=TUT1 PE=1 SV=2
Length = 874
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 155 WSCALCQVSAPTERGLDEHLQGRKHKAKV 183
+ C LC V+ LD HL GRKH+ V
Sbjct: 16 FRCCLCHVTTANRPSLDAHLGGRKHRHLV 44
>sp|Q4KMD7|STPAP_DANRE Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Danio
rerio GN=tut1 PE=2 SV=1
Length = 797
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 153 KEWSCALCQVSAPTERGLDEHLQGRKH 179
K + C LC V+ P L++H++G+KH
Sbjct: 12 KGFHCNLCHVNIPNRPSLEDHVKGKKH 38
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 1 PKPDTSVCGSKQKAATPPAGSGELPSTSSNKSKEWSCVLCQVSATTERDLDVHLQGKKH 59
P+P S K P GE + + K + C +C S TT+ +L +H+Q KH
Sbjct: 666 PEPGGSCVYCKTGQPHPRLARGE---SYTRGYKPFRCEVCNYSTTTKGNLSIHMQSDKH 721
>sp|Q758Q9|MYO1_ASHGO Myosin-1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=MYO1 PE=3 SV=2
Length = 1292
Score = 31.2 bits (69), Expect = 6.3, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 49 DLDVHLQGKKHKAKEKLLRDLKMCINSTSKK--ATESRDSADQEMK---PNVEDESVKAN 103
D+ + G K K++L RDL +NSTS AT D+ D++ K P D+ +++
Sbjct: 528 DVTYDIGGMTDKNKDQLQRDLVELLNSTSNTFLATIFPDTGDKDSKRRPPTAGDKIIRSA 587
Query: 104 KTVVGLDQKLEGGQTLQVKPN 124
+V K + +KPN
Sbjct: 588 NELVDTLSKAQPSYIRTIKPN 608
>sp|O08781|ZMAT3_RAT Zinc finger matrin-type protein 3 OS=Rattus norvegicus GN=Zmat3
PE=2 SV=1
Length = 289
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 154 EWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
++ C++C V A E +HL+ ++HK+KV+
Sbjct: 244 QFYCSMCNVGAGEEVEFRQHLESKQHKSKVS 274
>sp|O54836|ZMAT3_MOUSE Zinc finger matrin-type protein 3 OS=Mus musculus GN=Zmat3 PE=2
SV=1
Length = 290
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 154 EWSCALCQVSAPTERGLDEHLQGRKHKAKVA 184
++ C++C V A E +HL+ ++HK+KV+
Sbjct: 245 QFYCSMCNVGAGEEVEFRQHLESKQHKSKVS 275
>sp|Q15911|ZFHX3_HUMAN Zinc finger homeobox protein 3 OS=Homo sapiens GN=ZFHX3 PE=1 SV=2
Length = 3703
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 25 PSTSSNKSK-EWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLR 67
PS + K+K W C +C R+L +H+ +KH LL+
Sbjct: 793 PSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQ 836
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 33 KEWSCVLCQVSATTERDLDVHLQGKKH 59
K + C +C S TT+ +L +H+Q KH
Sbjct: 724 KPFRCEVCNYSTTTKGNLSIHMQSDKH 750
>sp|Q61329|ZFHX3_MOUSE Zinc finger homeobox protein 3 OS=Mus musculus GN=Zfhx3 PE=1 SV=1
Length = 3726
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 25 PSTSSNKSK-EWSCVLCQVSATTERDLDVHLQGKKHKAKEKLLR 67
PS + K+K W C +C R+L +H+ +KH LL+
Sbjct: 794 PSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQ 837
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 33 KEWSCVLCQVSATTERDLDVHLQGKKH 59
K + C +C S TT+ +L +H+Q KH
Sbjct: 725 KPFRCEVCNYSTTTKGNLSIHMQSDKH 751
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 143 ELPLTNSNKPKEWSCALCQVSAPTERGLDEHLQGRKHKAKVAGL 186
E PL N C +C + +E H+ G++HK KVA L
Sbjct: 33 ESPLAKYNSLGHLLCVVCNIQIKSELLWPAHILGKQHKEKVAEL 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.122 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,490,024
Number of Sequences: 539616
Number of extensions: 3831671
Number of successful extensions: 8579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 8217
Number of HSP's gapped (non-prelim): 448
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)