BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041581
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 5 KLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIWPK 64
K+ + LIE +R T+ KRK+G+ KK E TLCGV C ++Y P N+ P E WP
Sbjct: 4 KMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSP-FNSIP---EAWPS 59
Query: 65 DE------KDFMQVVNLYKDKAYSSVRGVKSLSLFDFFADRKRKVDENIAKTRKANYES- 117
E FM++ L + K K + F + R K E + K R N+ S
Sbjct: 60 REGVEDVVSKFMELSVLDRTK--------KMVDQETFISQRIAKEKEQLQKLRDENHNSQ 111
Query: 118 ----LFSTDDWDEMINRFSIDQLKQMLVVFDEYIDVATRKLTIM 157
+F + + L+ + + D+Y++ TR++ I+
Sbjct: 112 IRELMFGCLKGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155
>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
GN=AGL86 PE=1 SV=1
Length = 339
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 3 RGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIW 62
R K+ + LI + +R T++KRK G+ K E +TLCGV C +I P N PV +W
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYEN--PV---VW 56
Query: 63 PKDEKDFMQVVNLYKDKAYSSVRGVKSLSLFDFFADRKRKVDENIAKTRKANYES----- 117
P E + V+++ ++ ++ + +S + D+ K + + R+ N ES
Sbjct: 57 PSTE-GVQEAVSMFMERP-ATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQF 114
Query: 118 LFSTDDWDEMINRFSIDQLKQMLVVFDEYID 148
+F + +++ L+ + + D YI+
Sbjct: 115 MFDCVEGKMSEHQYGARDLQDLSLYIDHYIN 145
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 5 KLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIWPK 64
K+ + LI E++R ++ KRK G+ KK E STLCGV C +IY P + PV E WP
Sbjct: 3 KVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFI---PVP-ESWPS 58
Query: 65 DE 66
E
Sbjct: 59 RE 60
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 3 RGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIW 62
R K + LI R T++KR G++KK E +TLC + C +IY P N +W
Sbjct: 2 RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPT-----VW 56
Query: 63 PKDEKDFMQVVNLYKDKAYSSVRGVKSLSLFDFFADRKRKVDENIAKTRKANYESLFSTD 122
P E +V++ + +K ++ R +S F D+ K + R+ N E+
Sbjct: 57 PSTE-GVQEVISEFMEKP-ATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQLKHF 114
Query: 123 DWDEMINRFSIDQ-----LKQMLVVFDEYIDV--ATRKLTIMRGQQQSCI 165
+D + + S Q L+ + + D+Y++ A +K G+ S +
Sbjct: 115 MFDCVGGKMSEQQYGARDLQDLSLFTDQYLNQLNARKKFLTEYGESSSSV 164
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ +Q I+ +R +T+ KR++GL KKA+E + LC C+II+
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFS 49
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 5 KLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIWPK 64
K+ + LI E++R ++ KRK G+ KK E STLCGV C +IY P + PV E WP
Sbjct: 3 KVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFI---PVP-ESWPS 58
Query: 65 DE 66
E
Sbjct: 59 RE 60
>sp|O80805|PHE1_ARATH MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana
GN=PHE1 PE=1 SV=1
Length = 279
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 3 RGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVEIW 62
RGK+ + IE + R T+ KRK+G+ KK E TLCGV C +I P + + E W
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQ----EPW 57
Query: 63 PKDE------KDFMQVVNLYKDKAYSSVRGVKSLSLFDFFADRKRKVDENIAKTRKANYE 116
P E FM+ L + K K + F R K E + K R N
Sbjct: 58 PSREGVEEVMSKFMEFSVLDRTK--------KMVDQETFLRQRIAKETERLQKLRDENRN 109
Query: 117 S-----LFSTDDWDEMINRFSIDQLKQMLVVFDEYIDVATRKLTIMRGQQQS 163
S +F + ++ L + V ++Y++ R++ I++ +S
Sbjct: 110 SQIRDLMFGCLKGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGES 161
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ ++ IE R +TY KR+ G+ KKA+E + LC +II+G
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFG 49
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ ++ IE R +TY KR+ G+ KKA+E S LC +II+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFA 49
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTR 51
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTR 51
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
MGRGK+ +Q I+ +R +T+ KR++GL KKA+E + LC +II+
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSS 50
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
M RGK M+ IE +R +T+ KR+ GL KKA E S LC +II+ PR
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPR 51
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
MGRGK+ ++ IE R +TY KR+ G+ KKA+E S LC +II+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFAS 50
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
+GR K+ M I+KE R +T+ KR+ GL KKA E TLCG +I++ P
Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSP 111
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
MGRGK+ ++ IE R +TY KR+ G+ KKA+E S LC +II+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFAS 50
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGR 51
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGR 51
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLN 53
MGRGK+ ++ IE E +R +T+ KR+ GL KKA E + LC V I++ + N
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGN 53
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ +Q IE + +R +T+ KR+ GL KKA E S LC ++++
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFS 49
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVD 58
MGRGK+ ++ IE R++T+ KR+ GL KKA+E + LC +II+ N + +D
Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFAS--NGKMID 56
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + R +T+ KR+ GL KKA E S LC I++ P+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPK 51
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE R +T+ KR+ GL KKA E S LC +I++ R
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTR 51
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVE 60
MGRGK+ ++ IE R +T+ KR+ GL KKA E S LC +I++ R
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR-------GR 53
Query: 61 IWPKDEKDFMQVVNLYKDKAYSSVRGVKSLSLFD--FFADRKRKVDENIAKTRKANYESL 118
++ V YK KA S +++ + + K+ + I+ + AN ++
Sbjct: 54 LYEYANNSVKSTVERYK-KANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTI 112
Query: 119 FSTDDWDEMINRFSIDQLKQM 139
+ IN S+ LKQ+
Sbjct: 113 VG-----DSINTMSLRDLKQV 128
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
M RGK M+ IE +R +T+ KR+ GL KKA E S LC ++I+ PR
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPR 51
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ ++ IE +R +T+ KR+ GL KKA E S LC +I++ R
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 51
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ ++ IE +R +T+ KR+ GL KKA E S LC +I++
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFS 49
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ M+ IE + R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 51
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPRLNNRPVDVE 60
MGR K+T++ I E+ R T+ KRK GL KKA E S LC MI++ NN+
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSS--NNK----- 55
Query: 61 IWPKDEKDFMQVVNLYKDKAYSSVRGVKSLSLFDFFADRKRK 102
++ +D +++ Y D ++ + + + F ++K K
Sbjct: 56 LFQYSSRDMDKLLIRYTDNTDNTRKNLTNQDYNRVFGNKKSK 97
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ ++ IE +R +T+ KR+ GL KKA E S LC +I++
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFS 49
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KK E S LC +II+ +
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSK 54
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
M RGK M+ IE +R +T+ KR+ GL KKA E S LC +I++ PR
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPR 51
>sp|Q12224|RLM1_YEAST Transcription factor RLM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RLM1 PE=1 SV=1
Length = 676
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGR K+ +Q I ++ R +T+ KRK GL KKA E S LC V +II G
Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILG 49
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + R +T+ KR+ GL KKA E S LC ++I+ R
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNR 51
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
M R + ++ IE AR +T+ KR+RGL KKAEE S LC +I++
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSS 50
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + +R +T+ KR+ GL KKA E + LC +I++ R
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSR 51
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ ++ IE + R +T+ KR+ GL KKA E S LC ++I+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSK 51
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
MGRGK+ ++ IE + R +T+ KRK GL KKA E S LC +II+
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFST 50
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYG 49
MGRGK+ ++ IE + AR +T+ KR+ GL KK E S LC +I++
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFS 49
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGP 50
MGRGK+ ++ I +R +T+ KR+ GL KKA+E + LC +II+
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSS 50
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRGK+ ++ IE + R +T+ KR+ GL KKA E S LC +II+ +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTK 51
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIY 48
MGRGK+ ++ I+ +R +T+ KR+ GL KKA+E S LC +II+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIF 48
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var.
italica GN=CAL PE=2 SV=1
Length = 251
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ M+ IE + R +T+ KR+ GL KKA E S LC +I++ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHK 51
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ ++ IE + R +T+ KR+ GL KKA E S LC +II+ R
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 51
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIY 48
M R K+ ++ I+ AR +T+ KR+RGL KKAEE S LC +II+
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIF 48
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ M+ IE + R +T+ KR+ GL KKA E S LC +I++ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHK 51
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
+GRGK+ ++ IE R +T+ KR+ GL KKA E S LC +I++ R
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 67
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ M+ IE + R +T+ KR+ GL KKA E S LC +I++ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHK 51
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
MGRG++ M+ IE + R +T+ KR+ GL KKA E S LC +I++ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHK 51
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 MGRGKLTMQLIEKEKARMITYQKRKRGLKKKAEEFSTLCGVPTCMIIYGPR 51
+GRGK+ ++ IE R +T+ KR+ GL KKA E S LC +I++ R
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,206,558
Number of Sequences: 539616
Number of extensions: 3700126
Number of successful extensions: 9527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 9359
Number of HSP's gapped (non-prelim): 186
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)