Query 041583
Match_columns 586
No_of_seqs 231 out of 705
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 14:35:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wee_A PHD finger family prote 99.6 1.5E-16 5.2E-21 130.9 2.3 63 522-584 4-66 (72)
2 1wew_A DNA-binding family prot 99.4 4.3E-14 1.5E-18 118.2 1.2 54 530-584 12-72 (78)
3 2rsd_A E3 SUMO-protein ligase 99.4 7.4E-14 2.5E-18 114.0 1.8 53 531-584 7-65 (68)
4 3o70_A PHD finger protein 13; 99.4 1E-13 3.5E-18 113.7 2.0 54 529-584 14-67 (68)
5 3o7a_A PHD finger protein 13 v 99.3 1.1E-13 3.9E-18 107.4 0.9 50 533-584 3-52 (52)
6 3kqi_A GRC5, PHD finger protei 99.3 3.1E-13 1E-17 112.1 0.8 55 529-583 5-60 (75)
7 1wep_A PHF8; structural genomi 99.3 3.7E-13 1.3E-17 112.6 1.2 55 530-584 8-63 (79)
8 1we9_A PHD finger family prote 99.3 6.3E-13 2.2E-17 106.5 1.9 55 530-584 2-58 (64)
9 2lv9_A Histone-lysine N-methyl 99.3 1.9E-12 6.4E-17 112.7 4.8 53 530-584 24-76 (98)
10 1wem_A Death associated transc 99.2 1.3E-12 4.6E-17 108.2 -1.7 53 530-583 12-69 (76)
11 2kgg_A Histone demethylase jar 99.1 5.2E-12 1.8E-16 98.1 -0.1 46 537-582 6-52 (52)
12 2k16_A Transcription initiatio 99.1 2.9E-11 9.8E-16 99.7 2.4 57 527-584 11-68 (75)
13 2ri7_A Nucleosome-remodeling f 98.9 8.6E-11 2.9E-15 110.0 -1.7 54 530-583 4-58 (174)
14 3kv5_D JMJC domain-containing 98.9 2.1E-10 7.1E-15 124.4 -0.7 55 529-583 32-87 (488)
15 1wen_A Inhibitor of growth fam 98.8 3E-09 1E-13 87.9 4.0 51 530-584 12-65 (71)
16 1x4i_A Inhibitor of growth pro 98.8 1.2E-09 4.1E-14 90.0 0.7 50 530-583 2-54 (70)
17 3c6w_A P28ING5, inhibitor of g 98.7 1.5E-09 5.3E-14 86.6 0.9 49 531-583 6-57 (59)
18 1weu_A Inhibitor of growth fam 98.7 4E-09 1.4E-13 91.3 3.5 51 530-584 32-85 (91)
19 2g6q_A Inhibitor of growth pro 98.7 1.9E-09 6.6E-14 86.9 0.8 51 530-584 7-60 (62)
20 2jmi_A Protein YNG1, ING1 homo 98.7 3.4E-09 1.2E-13 91.6 1.8 50 529-582 21-74 (90)
21 2vpb_A Hpygo1, pygopus homolog 98.6 1.5E-09 5.2E-14 88.3 -1.8 48 535-582 9-64 (65)
22 2vnf_A ING 4, P29ING4, inhibit 98.6 4.3E-09 1.5E-13 84.1 0.8 50 530-583 6-58 (60)
23 2xb1_A Pygopus homolog 2, B-ce 98.5 4.7E-09 1.6E-13 92.5 -2.6 49 536-584 5-61 (105)
24 3pur_A Lysine-specific demethy 98.5 3.7E-08 1.3E-12 107.5 2.4 57 527-583 33-93 (528)
25 1f62_A Transcription factor WS 98.1 1.6E-06 5.5E-11 66.4 3.0 46 537-584 3-50 (51)
26 2ku3_A Bromodomain-containing 97.8 4E-06 1.4E-10 69.2 1.3 49 532-583 14-65 (71)
27 2l43_A N-teminal domain from h 97.7 4.5E-06 1.6E-10 71.4 0.2 48 533-583 24-74 (88)
28 2l5u_A Chromodomain-helicase-D 97.7 9.4E-06 3.2E-10 64.8 1.8 50 531-584 8-58 (61)
29 1mm2_A MI2-beta; PHD, zinc fin 97.7 2E-05 6.8E-10 62.9 3.4 51 530-584 5-56 (61)
30 2yt5_A Metal-response element- 97.7 7.7E-06 2.6E-10 65.5 0.7 54 531-584 3-61 (66)
31 2yql_A PHD finger protein 21A; 97.7 1.3E-05 4.5E-10 62.7 1.7 51 529-583 4-55 (56)
32 2e6r_A Jumonji/ARID domain-con 97.6 1E-05 3.6E-10 69.6 1.1 47 535-583 17-65 (92)
33 3asl_A E3 ubiquitin-protein li 97.6 2.8E-05 9.7E-10 63.8 3.5 45 538-584 23-69 (70)
34 1xwh_A Autoimmune regulator; P 97.5 2.7E-05 9.1E-10 62.9 1.8 48 532-583 6-54 (66)
35 2lri_C Autoimmune regulator; Z 97.5 4.9E-05 1.7E-09 61.9 3.1 46 535-584 13-59 (66)
36 2puy_A PHD finger protein 21A; 97.4 3.3E-05 1.1E-09 61.1 1.3 47 533-583 4-51 (60)
37 2e6s_A E3 ubiquitin-protein li 97.4 0.00017 5.8E-09 60.4 5.2 44 538-583 31-76 (77)
38 3shb_A E3 ubiquitin-protein li 97.2 0.00016 5.5E-09 60.6 3.2 44 538-583 31-76 (77)
39 3ask_A E3 ubiquitin-protein li 97.2 0.00015 5.3E-09 71.9 3.1 47 536-584 176-225 (226)
40 3v43_A Histone acetyltransfera 97.1 0.00037 1.3E-08 61.4 4.3 48 536-584 63-112 (112)
41 4gne_A Histone-lysine N-methyl 97.1 0.00019 6.4E-09 63.7 2.2 46 531-582 12-60 (107)
42 2kwj_A Zinc finger protein DPF 97.0 0.00023 7.9E-09 63.0 2.2 46 536-583 60-107 (114)
43 4bbq_A Lysine-specific demethy 96.7 0.00055 1.9E-08 60.1 1.8 42 543-584 69-114 (117)
44 2ysm_A Myeloid/lymphoid or mix 96.7 0.00064 2.2E-08 59.4 2.2 46 536-583 56-103 (111)
45 1wev_A Riken cDNA 1110020M19; 96.6 0.00034 1.2E-08 59.6 0.2 51 533-583 15-71 (88)
46 1fp0_A KAP-1 corepressor; PHD 96.2 0.0029 1E-07 54.4 3.6 49 531-583 22-71 (88)
47 2ysm_A Myeloid/lymphoid or mix 95.7 0.0078 2.7E-07 52.5 4.1 49 533-582 6-55 (111)
48 3v43_A Histone acetyltransfera 92.0 0.026 8.7E-07 49.6 -0.3 46 537-582 8-62 (112)
49 2rno_A Putative DNA-binding pr 90.1 0.053 1.8E-06 47.9 -0.2 45 469-516 63-109 (110)
50 2kwj_A Zinc finger protein DPF 87.9 0.084 2.9E-06 46.5 -0.5 38 544-581 18-58 (114)
51 2lbm_A Transcriptional regulat 85.5 0.25 8.6E-06 45.8 1.3 52 529-584 58-117 (142)
52 3ql9_A Transcriptional regulat 82.0 0.26 9E-06 45.0 -0.1 51 530-584 53-111 (129)
53 2l7p_A Histone-lysine N-methyl 72.4 1.4 4.9E-05 38.7 1.8 34 546-580 25-58 (100)
54 1iym_A EL5; ring-H2 finger, ub 65.9 3.5 0.00012 30.2 2.5 47 535-585 6-53 (55)
55 2v9v_A Selenocysteine-specific 64.3 14 0.00046 32.0 6.4 68 278-346 58-128 (135)
56 1yop_A KTI11P; zinc finger, me 62.8 2 6.8E-05 36.6 0.6 39 523-561 12-57 (83)
57 2jr7_A DPH3 homolog; DESR1, CS 62.4 1.7 5.7E-05 37.5 0.1 41 523-563 12-59 (89)
58 1wge_A Hypothetical protein 26 60.6 2.8 9.5E-05 35.7 1.2 40 523-562 19-65 (83)
59 3ivp_A Putative transposon-rel 54.5 6 0.00021 33.9 2.3 92 165-271 9-100 (126)
60 3czq_A Putative polyphosphate 51.4 26 0.0009 35.9 6.8 106 128-247 73-200 (304)
61 1wil_A KIAA1045 protein; ring 51.0 5.4 0.00018 34.4 1.4 49 533-583 14-75 (89)
62 2lq6_A Bromodomain-containing 50.2 6.4 0.00022 33.3 1.7 36 529-566 12-50 (87)
63 2hqh_E Restin; beta/BETA struc 49.4 3.7 0.00012 28.1 0.1 13 87-99 1-13 (26)
64 2e61_A Zinc finger CW-type PWW 49.0 16 0.00053 30.0 3.8 32 547-580 16-49 (69)
65 6rxn_A Rubredoxin; electron tr 42.2 8.8 0.0003 29.2 1.2 15 570-584 25-39 (46)
66 2ecm_A Ring finger and CHY zin 42.1 5.9 0.0002 28.9 0.3 48 535-586 6-54 (55)
67 2l0b_A E3 ubiquitin-protein li 37.6 9 0.00031 31.5 0.7 50 531-585 37-87 (91)
68 1r7c_A Genome polyprotein; mem 36.7 14 0.00046 26.3 1.3 17 162-178 1-17 (31)
69 1v2y_A 3300001G02RIK protein; 36.5 19 0.00067 31.3 2.7 21 463-483 22-42 (105)
70 1weo_A Cellulose synthase, cat 35.1 7.6 0.00026 33.7 -0.1 47 535-584 17-67 (93)
71 1v5n_A PDI-like hypothetical p 34.2 16 0.00054 30.9 1.7 35 534-570 47-82 (89)
72 1weq_A PHD finger protein 7; s 33.4 35 0.0012 29.1 3.7 46 535-583 27-78 (85)
73 1lva_A Selenocysteine-specific 32.6 68 0.0023 31.3 6.2 68 278-346 58-128 (258)
74 2pv0_B DNA (cytosine-5)-methyl 31.7 13 0.00046 39.4 1.0 53 528-584 87-148 (386)
75 2ect_A Ring finger protein 126 30.2 27 0.00093 27.3 2.4 48 533-585 14-62 (78)
76 2kiz_A E3 ubiquitin-protein li 27.9 11 0.00037 28.9 -0.4 50 531-585 11-61 (69)
77 2l6l_A DNAJ homolog subfamily 26.1 16 0.00056 33.0 0.4 33 528-561 106-145 (155)
78 3a1b_A DNA (cytosine-5)-methyl 26.0 22 0.00075 33.6 1.3 53 528-584 73-134 (159)
79 3lfp_A CSP231I C protein; tran 25.4 32 0.0011 28.0 2.0 84 169-273 2-89 (98)
80 4eto_A Protein S100-A4; calciu 24.3 1.2E+02 0.0042 24.7 5.5 51 283-335 4-63 (93)
81 1xax_A Hypothetical UPF0054 pr 23.6 14 0.00048 34.4 -0.5 14 135-148 112-125 (154)
82 1xm5_A Hypothetical UPF0054 pr 23.3 13 0.00045 34.6 -0.8 14 135-148 112-125 (155)
83 1oz9_A Hypothetical protein AQ 22.4 14 0.00049 34.1 -0.8 14 135-148 113-126 (150)
84 2ep4_A Ring finger protein 24; 22.2 20 0.00068 27.8 0.2 47 534-585 15-62 (74)
85 2gyq_A YCFI, putative structur 21.6 39 0.0013 31.9 2.0 64 268-337 8-75 (173)
86 3a9j_A Ubiquitin; protein comp 21.2 56 0.0019 24.8 2.6 20 463-482 15-34 (76)
87 3n22_A Protein S100-A2; EF-han 20.8 1.3E+02 0.0046 24.8 5.1 53 283-335 5-64 (98)
88 1x4j_A Ring finger protein 38; 20.4 18 0.00063 28.2 -0.4 49 532-585 21-70 (75)
89 3czp_A Putative polyphosphate 20.0 1.4E+02 0.0046 32.6 6.1 140 140-297 294-462 (500)
No 1
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.60 E-value=1.5e-16 Score=130.93 Aligned_cols=63 Identities=52% Similarity=1.106 Sum_probs=56.2
Q ss_pred ccccccCCCCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 522 TELRFEGGADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 522 ~~~~~e~g~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
...++|++++++.++|+||..++||++|||||.|+.|||..|+||+..+..|+.|+|+.|.++
T Consensus 4 ~~~~~e~~~~~~~~~C~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 4 GSSGMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSCCCSCSSCSSEECCTTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred ccccccCCCCCcceEeeCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 345778888999999999998888989999999999999999999976677899999999753
No 2
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.39 E-value=4.3e-14 Score=118.17 Aligned_cols=54 Identities=33% Similarity=0.868 Sum_probs=47.0
Q ss_pred CCCCcEEeecCCCCCCCCCeEeec--CCCccccccccccCCCC-----CCCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACD--ICQVWQHTRCNSIADNE-----VVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD--~C~vWQH~~CvGI~~~~-----~~p~~f~C~~C~~~ 584 (586)
++++.++|+||..+++| +||||| .|..|||+.||||+..+ ..++.|+|+.|.++
T Consensus 12 ~~~~~~~CiC~~~~~~g-~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 12 QPEIKVRCVCGNSLETD-SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SCCCCCCCSSCCCCCCS-CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCCCEEeECCCcCCCC-CEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 35689999999986666 999999 99999999999998765 45899999999764
No 3
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.38 E-value=7.4e-14 Score=113.96 Aligned_cols=53 Identities=38% Similarity=0.873 Sum_probs=44.5
Q ss_pred CCCcEEeecCCCCCCCCCeEeecC--CCccccccccccCCCC----CCCCceecCCCCCC
Q 041583 531 DDWTVDCVCGAKDDDGERMVACDI--CQVWQHTRCNSIADNE----VVPSVFKCRACTAA 584 (586)
Q Consensus 531 d~~~VrCiCG~~dDDGe~MIqCD~--C~vWQH~~CvGI~~~~----~~p~~f~C~~C~~~ 584 (586)
.+..|+|+||..+++| +||+||. |+.|||..||||++.+ ..|+.|+|+.|+.+
T Consensus 7 ~e~~v~C~C~~~~~~g-~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 7 PEAKVRCICSSTMVND-SMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp SSCEECCTTCCCSCCS-CEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCCCEEeECCCCcCCC-CEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 4567999999987777 8999994 9999999999998653 24689999999753
No 4
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.37 E-value=1e-13 Score=113.70 Aligned_cols=54 Identities=31% Similarity=0.705 Sum_probs=46.5
Q ss_pred CCCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 529 GADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 529 g~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
..+...++|+||..++ |++|||||.|+.|||+.|+||+.. ..|+.|+|+.|..+
T Consensus 14 ~~~~~~~~CiC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~-~~~~~~~C~~C~~s 67 (68)
T 3o70_A 14 LYFQGLVTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKS-NVPEVFVCQKCRDS 67 (68)
T ss_dssp CTTTTCCCSTTCCCCT-TCCEEECTTTCCEEETTTTTCCTT-SCCSSCCCHHHHTC
T ss_pred CCCCCceEeECCCcCC-CCCEEECCCCCccccccccCcCcc-cCCCcEECCCCCCC
Confidence 3467889999999654 779999999999999999999865 67899999999754
No 5
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.35 E-value=1.1e-13 Score=107.37 Aligned_cols=50 Identities=34% Similarity=0.821 Sum_probs=43.3
Q ss_pred CcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 533 WTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 533 ~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
..++|+||..++ |++||+||.|+.|||+.|+||+.. ..|+.|+|+.|..+
T Consensus 3 d~~~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~-~~~~~~~C~~C~~S 52 (52)
T 3o7a_A 3 DLVTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKS-NVPEVFVCQKCRDS 52 (52)
T ss_dssp TCBCSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGG-GCCSSCCCHHHHTC
T ss_pred cCeEEEeCCcCC-CCCEEEcCCCCccccccccCCCcc-cCCCcEECcCCCCc
Confidence 358999999755 669999999999999999999865 56899999999754
No 6
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.30 E-value=3.1e-13 Score=112.12 Aligned_cols=55 Identities=27% Similarity=0.671 Sum_probs=47.5
Q ss_pred CCCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCC-CCCceecCCCCC
Q 041583 529 GADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEV-VPSVFKCRACTA 583 (586)
Q Consensus 529 g~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~-~p~~f~C~~C~~ 583 (586)
+.+++.++|+|+..++++++|||||.|+.|||..|+|+++.+. .++.|+|+.|..
T Consensus 5 ~~~~~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 5 SMATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp TTCCCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred CCCCCeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 4678999999999877677999999999999999999987643 348999999974
No 7
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.29 E-value=3.7e-13 Score=112.56 Aligned_cols=55 Identities=25% Similarity=0.642 Sum_probs=47.8
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCC-CCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEV-VPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~-~p~~f~C~~C~~~ 584 (586)
.+.+.++|+|+..+|++++|||||.|+.|||..|++|+..+. .++.|+|+.|...
T Consensus 8 ~~~~~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 8 MALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CCCCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred ccCCccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 467899999999887677999999999999999999986543 3689999999864
No 8
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.28 E-value=6.3e-13 Score=106.52 Aligned_cols=55 Identities=25% Similarity=0.726 Sum_probs=46.9
Q ss_pred CCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCC-CCCceecCCCCCC
Q 041583 530 ADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEV-VPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~-~p~~f~C~~C~~~ 584 (586)
.++...+| +|+..++++++|||||.|+.|||..|+||+..+. .++.|+|+.|...
T Consensus 2 s~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 2 SSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 45677889 9999887778999999999999999999986543 3689999999754
No 9
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.28 E-value=1.9e-12 Score=112.74 Aligned_cols=53 Identities=36% Similarity=0.912 Sum_probs=45.5
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
.+++.|+|+||..+++| .||+||.|..|||..|++++.. .+|+.|+|+.|.++
T Consensus 24 ~~~d~vrCiC~~~~~~~-~mi~Cd~C~~w~H~~C~~~~~~-~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 24 YGTDVTRCICGFTHDDG-YMICCDKCSVWQHIDCMGIDRQ-HIPDTYLCERCQPR 76 (98)
T ss_dssp CCCCBCCCTTSCCSCSS-CEEEBTTTCBEEETTTTTCCTT-SCCSSBCCTTTSSS
T ss_pred CCCCCEEeECCCccCCC-cEEEcCCCCCcCcCcCCCCCcc-CCCCCEECCCCcCC
Confidence 34567999999987666 8999999999999999999743 67889999999864
No 10
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.17 E-value=1.3e-12 Score=108.18 Aligned_cols=53 Identities=26% Similarity=0.666 Sum_probs=44.3
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCC-----CCCceecCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEV-----VPSVFKCRACTA 583 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~-----~p~~f~C~~C~~ 583 (586)
.+++.++|+|+..++ +++||+||.|+.|||..|+||+.... .+..|+|+.|..
T Consensus 12 ~d~~~~~C~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 12 YDPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp CCTTCCCSTTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred cCCCCCEEECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcC
Confidence 366789999999765 55999999999999999999986432 368999999964
No 11
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.12 E-value=5.2e-12 Score=98.11 Aligned_cols=46 Identities=24% Similarity=0.537 Sum_probs=39.6
Q ss_pred eecCCCCCCCCCeEeec-CCCccccccccccCCCCCCCCceecCCCC
Q 041583 537 CVCGAKDDDGERMVACD-ICQVWQHTRCNSIADNEVVPSVFKCRACT 582 (586)
Q Consensus 537 CiCG~~dDDGe~MIqCD-~C~vWQH~~CvGI~~~~~~p~~f~C~~C~ 582 (586)
|+|+.+++|+++||+|| .|+.|||+.|+||+..+..++.|+|+.|.
T Consensus 6 c~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 6 QNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp TTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 58999888888999999 89999999999998654345899999995
No 12
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.08 E-value=2.9e-11 Score=99.68 Aligned_cols=57 Identities=26% Similarity=0.549 Sum_probs=46.8
Q ss_pred cCCCCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 527 EGGADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 527 e~g~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
.+++++...+| +|+..+ ||+.||+||.|..|+|..|++++........|+|+.|...
T Consensus 11 ~~~~~~~~~~C~~C~~~~-~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 11 RDEWGNQIWICPGCNKPD-DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp ECSSSCEEECBTTTTBCC-SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred ccccCCCCcCCCCCCCCC-CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 34456677889 999864 5779999999999999999999876544589999999764
No 13
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.90 E-value=8.6e-11 Score=110.01 Aligned_cols=54 Identities=30% Similarity=0.780 Sum_probs=44.6
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCC-CCCCceecCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNE-VVPSVFKCRACTA 583 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~-~~p~~f~C~~C~~ 583 (586)
++++.++|+|+..+|+++.||+||.|..|+|..|+|++..+ ..++.|+|+.|..
T Consensus 4 ~~~~~~~C~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 4 GSDTKLYCICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp ---CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCCCCcEeeCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 36788999999987777799999999999999999997643 2478999999974
No 14
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.86 E-value=2.1e-10 Score=124.37 Aligned_cols=55 Identities=27% Similarity=0.669 Sum_probs=47.1
Q ss_pred CCCCCcEEeecCCCCCCCCCeEeecCCCccccccccccCCCCC-CCCceecCCCCC
Q 041583 529 GADDWTVDCVCGAKDDDGERMVACDICQVWQHTRCNSIADNEV-VPSVFKCRACTA 583 (586)
Q Consensus 529 g~d~~~VrCiCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~-~p~~f~C~~C~~ 583 (586)
+.+...++|+|+..+|++++|||||.|+.|||+.|+|++..+. .++.|+|+.|..
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 4467889999999877677999999999999999999987643 368999999974
No 15
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.78 E-value=3e-09 Score=87.88 Aligned_cols=51 Identities=24% Similarity=0.658 Sum_probs=41.7
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecC--CC-ccccccccccCCCCCCCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDI--CQ-VWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~--C~-vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
+++..++|+|+..+ +| .||+||. |. .|+|..|+|++..+ ...|+|+.|...
T Consensus 12 d~~~~~~C~C~~~~-~g-~MI~CD~~~C~~~wfH~~Cvgl~~~p--~g~w~Cp~C~~~ 65 (71)
T 1wen_A 12 DPNEPTYCLCHQVS-YG-EMIGCDNPDCSIEWFHFACVGLTTKP--RGKWFCPRCSQE 65 (71)
T ss_dssp CTTSCCCSTTCCCS-CS-SEECCSCSSCSCCCEETTTTTCSSCC--SSCCCCTTTSSC
T ss_pred CCCCCCEEECCCCC-CC-CEeEeeCCCCCCccEecccCCcCcCC--CCCEECCCCCcc
Confidence 35677999999864 46 7999999 77 79999999997543 378999999864
No 16
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=1.2e-09 Score=90.04 Aligned_cols=50 Identities=28% Similarity=0.650 Sum_probs=42.0
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCC---ccccccccccCCCCCCCCceecCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQ---VWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~---vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
.++..++|+|+.. ++| .||+||.|+ .|+|..|||++..+ ...|+|+.|..
T Consensus 2 ~~~~~~yC~C~~~-~~g-~MI~CD~cdC~~~WfH~~Cvgl~~~p--~~~w~Cp~C~~ 54 (70)
T 1x4i_A 2 SSGSSGYCICNQV-SYG-EMVGCDNQDCPIEWFHYGCVGLTEAP--KGKWYCPQCTA 54 (70)
T ss_dssp CCSCCCCSTTSCC-CCS-SEECCSCTTCSCCCEEHHHHTCSSCC--SSCCCCHHHHH
T ss_pred CCCCCeEEEcCCC-CCC-CEeEeCCCCCCccCCcccccccCcCC--CCCEECCCCCc
Confidence 4567899999986 567 899999985 99999999998542 58999999964
No 17
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.74 E-value=1.5e-09 Score=86.59 Aligned_cols=49 Identities=24% Similarity=0.685 Sum_probs=39.4
Q ss_pred CCCcEEeecCCCCCCCCCeEeecC--CC-ccccccccccCCCCCCCCceecCCCCC
Q 041583 531 DDWTVDCVCGAKDDDGERMVACDI--CQ-VWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 531 d~~~VrCiCG~~dDDGe~MIqCD~--C~-vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
++..++|+|+..+ +| .||+||. |. .|+|..|+|++..+ ...|+|+.|..
T Consensus 6 ~~e~~yC~C~~~~-~g-~mi~CD~~~C~~~wfH~~Cvgl~~~p--~~~w~Cp~C~~ 57 (59)
T 3c6w_A 6 SNEPTYCLCHQVS-YG-EMIGCDNPDCPIEWFHFACVDLTTKP--KGKWFCPRCVQ 57 (59)
T ss_dssp --CCEETTTTEEC-CS-EEEECSCTTCSSCEEETGGGTCSSCC--SSCCCCHHHHC
T ss_pred CCCCcEEECCCCC-CC-CeeEeeCCCCCCCCEecccCCcccCC--CCCEECcCccC
Confidence 5678999999864 56 7999999 77 69999999998543 37899999975
No 18
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.74 E-value=4e-09 Score=91.27 Aligned_cols=51 Identities=24% Similarity=0.658 Sum_probs=41.8
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecC--CC-ccccccccccCCCCCCCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDI--CQ-VWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~--C~-vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
+++..++|+|+..+ +| .||+||. |. .|+|..|++|+..+ +..|+|+.|...
T Consensus 32 d~~e~~yCiC~~~~-~g-~MI~CD~~dC~~~WfH~~CVgl~~~p--~g~W~Cp~C~~~ 85 (91)
T 1weu_A 32 DPNEPTYCLCHQVS-YG-EMIGCDNPDCSIEWFHFACVGLTTKP--RGKWFCPRCSQE 85 (91)
T ss_dssp CSCCCBCSTTCCBC-CS-CCCCCSCSSCSCCCCCSTTTTCSSCC--CSSCCCTTTCCC
T ss_pred CCCCCcEEECCCCC-CC-CEeEecCCCCCCCCEecccCCcCcCC--CCCEECcCccCc
Confidence 35677999999864 46 7999999 66 79999999998543 478999999864
No 19
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.72 E-value=1.9e-09 Score=86.90 Aligned_cols=51 Identities=25% Similarity=0.590 Sum_probs=40.0
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecCCC---ccccccccccCCCCCCCCceecCCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDICQ---VWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~C~---vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
+.+..++|+|+.. ++| .||+||.|+ .|+|..|+|++..+ ...|+|+.|..+
T Consensus 7 d~~e~~yC~C~~~-~~g-~MI~CD~c~C~~~WfH~~Cvgl~~~p--~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 7 DPNEPTYCLCNQV-SYG-EMIGCDNEQCPIEWFHFSCVSLTYKP--KGKWYCPKCRGD 60 (62)
T ss_dssp ---CCEETTTTEE-CCS-EEEECSCTTCSSCEEETGGGTCSSCC--SSCCCCHHHHTC
T ss_pred CCCCCcEEECCCC-CCC-CeeeeeCCCCCcccEecccCCcCcCC--CCCEECcCcccC
Confidence 3557799999986 456 799999955 99999999998542 479999999754
No 20
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.70 E-value=3.4e-09 Score=91.57 Aligned_cols=50 Identities=28% Similarity=0.602 Sum_probs=39.7
Q ss_pred CCCCCcEEeecCCCCCCCCCeEeecCCC---ccccccccccCCCCCCCCceecCC-CC
Q 041583 529 GADDWTVDCVCGAKDDDGERMVACDICQ---VWQHTRCNSIADNEVVPSVFKCRA-CT 582 (586)
Q Consensus 529 g~d~~~VrCiCG~~dDDGe~MIqCD~C~---vWQH~~CvGI~~~~~~p~~f~C~~-C~ 582 (586)
.+++..++|+|+.. ++| .||+||.|+ .|+|..||||+..+ ...|+|+. |.
T Consensus 21 ~~~~~~~yCiC~~~-~~g-~MI~CD~c~C~~eWfH~~CVgl~~~p--~~~W~Cp~cC~ 74 (90)
T 2jmi_A 21 NNNQEEVYCFCRNV-SYG-PMVACDNPACPFEWFHYGCVGLKQAP--KGKWYCSKDCK 74 (90)
T ss_dssp ---CCSCCSTTTCC-CSS-SEECCCSSSCSCSCEETTTSSCSSCT--TSCCCSSHHHH
T ss_pred CCCCCCcEEEeCCC-CCC-CEEEecCCCCccccCcCccCCCCcCC--CCCccCChhhc
Confidence 45678899999985 456 699999987 99999999998543 36999999 85
No 21
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.65 E-value=1.5e-09 Score=88.31 Aligned_cols=48 Identities=25% Similarity=0.823 Sum_probs=39.7
Q ss_pred EEe-ecCCCCCCCCCeEeec-CCCccccccccccCCCCC------CCCceecCCCC
Q 041583 535 VDC-VCGAKDDDGERMVACD-ICQVWQHTRCNSIADNEV------VPSVFKCRACT 582 (586)
Q Consensus 535 VrC-iCG~~dDDGe~MIqCD-~C~vWQH~~CvGI~~~~~------~p~~f~C~~C~ 582 (586)
-.| +|+...+++.+||+|| .|+.|+|..||||+.... ....|+|+.|.
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 346 8999888888999999 999999999999986421 12599999985
No 22
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.64 E-value=4.3e-09 Score=84.12 Aligned_cols=50 Identities=24% Similarity=0.671 Sum_probs=39.2
Q ss_pred CCCCcEEeecCCCCCCCCCeEeecC--CC-ccccccccccCCCCCCCCceecCCCCC
Q 041583 530 ADDWTVDCVCGAKDDDGERMVACDI--CQ-VWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 530 ~d~~~VrCiCG~~dDDGe~MIqCD~--C~-vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
+++..++|+|+..+ +| .||+||. |. .|+|..|+|++..+ ...|+|+.|..
T Consensus 6 d~~e~~~C~C~~~~-~g-~mi~CD~cdC~~~wfH~~Cvgl~~~p--~g~w~C~~C~~ 58 (60)
T 2vnf_A 6 DPNEPTYCLCHQVS-YG-EMIGCDNPDCSIEWFHFACVGLTTKP--RGKWFCPRCSQ 58 (60)
T ss_dssp ---CCEETTTTEEC-CS-EEEECSCTTCSSCEEETGGGTCSSCC--SSCCCCHHHHC
T ss_pred CCCCCCEEECCCcC-CC-CEEEeCCCCCCCceEehhcCCCCcCC--CCCEECcCccC
Confidence 35578999999864 46 7999999 55 89999999997543 37899999965
No 23
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.51 E-value=4.7e-09 Score=92.47 Aligned_cols=49 Identities=24% Similarity=0.809 Sum_probs=38.9
Q ss_pred Ee-ecCCCCCCCCCeEeec-CCCccccccccccCCCC------CCCCceecCCCCCC
Q 041583 536 DC-VCGAKDDDGERMVACD-ICQVWQHTRCNSIADNE------VVPSVFKCRACTAA 584 (586)
Q Consensus 536 rC-iCG~~dDDGe~MIqCD-~C~vWQH~~CvGI~~~~------~~p~~f~C~~C~~~ 584 (586)
.| +|+...+|+..||+|| .|+.|+|..||||+... .....|+|+.|...
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 47 8888865555899998 99999999999998632 12389999999753
No 24
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.47 E-value=3.7e-08 Score=107.49 Aligned_cols=57 Identities=21% Similarity=0.412 Sum_probs=39.8
Q ss_pred cCCCCCCcEEeecCCC---CCCCCCeEeecCCCccccccccccCCCCCC-CCceecCCCCC
Q 041583 527 EGGADDWTVDCVCGAK---DDDGERMVACDICQVWQHTRCNSIADNEVV-PSVFKCRACTA 583 (586)
Q Consensus 527 e~g~d~~~VrCiCG~~---dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~-p~~f~C~~C~~ 583 (586)
|.-.+.....+.+... .+++.+||+||.|+.|+|+.||||+..++. .+.|+|+.|..
T Consensus 33 ~~~~~~~~~~~s~kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 33 EKKKEKEKPLMSKKKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp ---------CCSCCCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred HhhhhhhhccccccccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 3333455666666554 457789999999999999999999976554 49999999974
No 25
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.07 E-value=1.6e-06 Score=66.37 Aligned_cols=46 Identities=35% Similarity=0.747 Sum_probs=36.5
Q ss_pred e-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCCC
Q 041583 537 C-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTAA 584 (586)
Q Consensus 537 C-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~~ 584 (586)
| +|+...+ ++.||.||.|..|+|..|++.+-. .+| ..|+|+.|...
T Consensus 3 C~vC~~~~~-~~~ll~Cd~C~~~~H~~Cl~p~l~-~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 3 CKVCRKKGE-DDKLILCDECNKAFHLFCLRPALY-EVPDGEWQCPACQPA 50 (51)
T ss_dssp CTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCC-SCCSSCCSCTTTSCC
T ss_pred CCCCCCCCC-CCCEEECCCCChhhCcccCCCCcC-CCCCCcEECcCcccc
Confidence 6 8998655 448999999999999999975433 344 69999999753
No 26
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.83 E-value=4e-06 Score=69.23 Aligned_cols=49 Identities=24% Similarity=0.731 Sum_probs=39.1
Q ss_pred CCcEEe-ecCCCC-CCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCC
Q 041583 532 DWTVDC-VCGAKD-DDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTA 583 (586)
Q Consensus 532 ~~~VrC-iCG~~d-DDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~ 583 (586)
.....| +|+..+ ++++.||.||.|..|+|..|++++. +| ..|+|+.|..
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~---vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY---IPEGQWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS---CCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc---CCCCCcCCccCcC
Confidence 345557 999864 4556899999999999999999973 44 6899999964
No 27
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.74 E-value=4.5e-06 Score=71.38 Aligned_cols=48 Identities=23% Similarity=0.714 Sum_probs=38.7
Q ss_pred CcEEe-ecCCCC-CCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCC
Q 041583 533 WTVDC-VCGAKD-DDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTA 583 (586)
Q Consensus 533 ~~VrC-iCG~~d-DDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~ 583 (586)
....| +|+..+ ++++.||.||.|..|+|..|++++. +| ..|+|+.|..
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~---vP~g~W~C~~C~~ 74 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY---IPEGQWLCRHCLQ 74 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS---CCSSCCCCHHHHH
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc---cCCCceECccccC
Confidence 34557 999854 3556899999999999999999973 44 6999999964
No 28
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.72 E-value=9.4e-06 Score=64.82 Aligned_cols=50 Identities=24% Similarity=0.553 Sum_probs=39.1
Q ss_pred CCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 531 DDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 531 d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
+++...| +|+.. | .|+.||.|..|+|..|++++-.......|+|+.|...
T Consensus 8 ~~~~~~C~vC~~~---g-~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQG---G-EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCC---S-SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCCC---C-cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 4556679 79862 3 7999999999999999998644333479999999753
No 29
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.70 E-value=2e-05 Score=62.91 Aligned_cols=51 Identities=27% Similarity=0.606 Sum_probs=38.6
Q ss_pred CCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 530 ADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
++.+...| +|+. +..|+.||.|..++|..|++.+-.......|+|+.|...
T Consensus 5 ~d~~~~~C~vC~~----~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKD----GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCC----CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCC----CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 35556668 7884 337999999999999999996533222379999999864
No 30
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.68 E-value=7.7e-06 Score=65.49 Aligned_cols=54 Identities=24% Similarity=0.498 Sum_probs=40.5
Q ss_pred CCCcEEe-ecCCCC-CCCCCeEeecCCCccccccccccCCCCC---CCCceecCCCCCC
Q 041583 531 DDWTVDC-VCGAKD-DDGERMVACDICQVWQHTRCNSIADNEV---VPSVFKCRACTAA 584 (586)
Q Consensus 531 d~~~VrC-iCG~~d-DDGe~MIqCD~C~vWQH~~CvGI~~~~~---~p~~f~C~~C~~~ 584 (586)
+.....| +|+..+ ++++.||.||.|..++|..|++++-... ....|+|+.|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 4455668 999853 3345899999999999999999863321 2378999999754
No 31
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=1.3e-05 Score=62.71 Aligned_cols=51 Identities=24% Similarity=0.597 Sum_probs=38.8
Q ss_pred CCCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCC
Q 041583 529 GADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 529 g~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
+.+.....| +|+.. | .||.||.|..|+|..|++.+-.......|+|+.|..
T Consensus 4 g~~~~~~~C~vC~~~---g-~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 4 GSSGHEDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCCSSCCSCSSSCCS---S-CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CcCCCCCCCccCCCC---C-eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 445666779 79973 4 799999999999999999643322237999999864
No 32
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.64 E-value=1e-05 Score=69.60 Aligned_cols=47 Identities=26% Similarity=0.647 Sum_probs=37.3
Q ss_pred EEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCC
Q 041583 535 VDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTA 583 (586)
Q Consensus 535 VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~ 583 (586)
..| +|+...+ .+.||.||.|..|+|..|++.+-. .+| ..|+|+.|..
T Consensus 17 ~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~-~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 17 YICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLP-EIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCS-SCCSSCCCCHHHHH
T ss_pred CCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcc-cCCCCCcCCccCcC
Confidence 458 8998654 448999999999999999995433 344 6999999964
No 33
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.63 E-value=2.8e-05 Score=63.82 Aligned_cols=45 Identities=27% Similarity=0.683 Sum_probs=35.0
Q ss_pred ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-C-ceecCCCCCC
Q 041583 538 VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-S-VFKCRACTAA 584 (586)
Q Consensus 538 iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~-~f~C~~C~~~ 584 (586)
+||..+ +++.||.||.|..|+|..|++.+-. .+| . .|+|+.|..+
T Consensus 23 ~C~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~-~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 23 LCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLS-SVPSEDEWYCPECRND 69 (70)
T ss_dssp TTCCCS-CGGGEEECTTTCCEEEGGGSSSCCS-SCCSSSCCCCTTTSCC
T ss_pred CCCCcC-CCCCEEEcCCCCCceecccCCCCcC-CCCCCCCcCCcCccCc
Confidence 677764 4558999999999999999995422 344 4 8999999753
No 34
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.52 E-value=2.7e-05 Score=62.95 Aligned_cols=48 Identities=27% Similarity=0.639 Sum_probs=36.4
Q ss_pred CCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCC
Q 041583 532 DWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 532 ~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
.+...| +|+.. | .||.||.|..|+|..|++.+-.......|+|+.|..
T Consensus 6 ~~~~~C~vC~~~---g-~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 6 KNEDECAVCRDG---G-ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp SCCCSBSSSSCC---S-SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCccCCCC---C-CEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 445568 79852 3 799999999999999999543322237999999964
No 35
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.49 E-value=4.9e-05 Score=61.91 Aligned_cols=46 Identities=28% Similarity=0.683 Sum_probs=35.3
Q ss_pred EEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 535 VDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 535 VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
..| +|+. .| .||.||.|..++|..|+..+-.......|+|+.|...
T Consensus 13 ~~C~vC~~---~~-~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGD---GT-DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSC---CT-TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCC---CC-eEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 458 8873 33 5999999999999999986543222378999999754
No 36
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.43 E-value=3.3e-05 Score=61.12 Aligned_cols=47 Identities=23% Similarity=0.589 Sum_probs=35.6
Q ss_pred CcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCC
Q 041583 533 WTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 533 ~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
....| +|+.. | .||.||.|..|+|..|++.+-.......|+|+.|..
T Consensus 4 ~~~~C~vC~~~---g-~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCC---S-SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCcCCCCC---C-cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 34458 78863 4 799999999999999999543322237999999964
No 37
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.39 E-value=0.00017 Score=60.36 Aligned_cols=44 Identities=32% Similarity=0.697 Sum_probs=35.0
Q ss_pred ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCC--ceecCCCCC
Q 041583 538 VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPS--VFKCRACTA 583 (586)
Q Consensus 538 iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~--~f~C~~C~~ 583 (586)
+||..+ +++.|+.||.|..++|..|++.+-. .+|. .|+|+.|..
T Consensus 31 vC~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~-~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 31 VCGGKH-EPNMQLLCDECNVAYHIYCLNPPLD-KVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCCCC-CSTTEEECSSSCCEEETTSSSSCCS-SCCCSSCCCCTTTCC
T ss_pred CcCCcC-CCCCEEEcCCCCccccccccCCCcc-CCCCCCCcCCcCccC
Confidence 788764 4558999999999999999995422 4553 799999975
No 38
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.22 E-value=0.00016 Score=60.59 Aligned_cols=44 Identities=27% Similarity=0.693 Sum_probs=33.4
Q ss_pred ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-Cc-eecCCCCC
Q 041583 538 VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SV-FKCRACTA 583 (586)
Q Consensus 538 iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~-f~C~~C~~ 583 (586)
+|+..+ +++.||.||.|..++|..|++.+-. .+| .. |+|+.|..
T Consensus 31 vC~~~~-d~~~ll~CD~C~~~yH~~Cl~PpL~-~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 31 LCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLS-SVPSEDEWYCPECRN 76 (77)
T ss_dssp TTCCCS-CGGGEEECTTTCCEEETTTSSSCCS-SCCSSSCCCCTTTC-
T ss_pred ccCCCC-CCcceeEeCCCCCccCcccCCCccc-CCCCCCceECcCccc
Confidence 677654 4458999999999999999995432 344 34 99999975
No 39
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.18 E-value=0.00015 Score=71.86 Aligned_cols=47 Identities=30% Similarity=0.748 Sum_probs=32.9
Q ss_pred Ee-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCC--ceecCCCCCC
Q 041583 536 DC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPS--VFKCRACTAA 584 (586)
Q Consensus 536 rC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~--~f~C~~C~~~ 584 (586)
.| +||..++ ++.|+.||.|..++|..|++.+-. .+|. .|+|+.|..+
T Consensus 176 ~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~-~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLS-SVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC---CCEECSSSCCEECSCC--CCCC-SCCSSSCCCCGGGC--
T ss_pred CCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcc-cCCCCCCCCCcCCcCc
Confidence 46 7888644 558999999999999999996533 4553 7999999753
No 40
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.09 E-value=0.00037 Score=61.43 Aligned_cols=48 Identities=23% Similarity=0.657 Sum_probs=36.3
Q ss_pred Ee-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCCC
Q 041583 536 DC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTAA 584 (586)
Q Consensus 536 rC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~~ 584 (586)
.| +|+...++++.|+.||.|..++|..|+..+-. .+| ..|+|+.|+++
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~-~~P~~~W~C~~C~~k 112 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLT-RMPKGMWICQICRPR 112 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCS-SCCSSCCCCTTTSCC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCC-CCCCCCeECCCCCCc
Confidence 35 67765445558999999999999999975433 333 68999999864
No 41
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.06 E-value=0.00019 Score=63.75 Aligned_cols=46 Identities=26% Similarity=0.533 Sum_probs=33.8
Q ss_pred CCCcEEe-ecCCCCCCCCCeEeec--CCCccccccccccCCCCCCCCceecCCCC
Q 041583 531 DDWTVDC-VCGAKDDDGERMVACD--ICQVWQHTRCNSIADNEVVPSVFKCRACT 582 (586)
Q Consensus 531 d~~~VrC-iCG~~dDDGe~MIqCD--~C~vWQH~~CvGI~~~~~~p~~f~C~~C~ 582 (586)
+.....| +|+ + |..||.|| .|..|+|..|+++...+ ...|+|+.|.
T Consensus 12 ~~~~~~C~~C~---~-~G~ll~CD~~~Cp~~fH~~Cl~L~~~P--~g~W~Cp~c~ 60 (107)
T 4gne_A 12 QMHEDYCFQCG---D-GGELVMCDKKDCPKAYHLLCLNLTQPP--YGKWECPWHQ 60 (107)
T ss_dssp CSSCSSCTTTC---C-CSEEEECCSTTCCCEECTGGGTCSSCC--SSCCCCGGGB
T ss_pred CCCCCCCCcCC---C-CCcEeEECCCCCCcccccccCcCCcCC--CCCEECCCCC
Confidence 3455568 677 2 34799999 89999999999976422 3678888654
No 42
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.00 E-value=0.00023 Score=63.02 Aligned_cols=46 Identities=26% Similarity=0.700 Sum_probs=36.1
Q ss_pred Ee-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCC
Q 041583 536 DC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTA 583 (586)
Q Consensus 536 rC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~ 583 (586)
.| +||..++++ .|+.||.|..++|..|++.+-. .+| ..|+|+.|..
T Consensus 60 ~C~~C~~~~~~~-~ll~Cd~C~~~yH~~Cl~ppl~-~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSENDD-QLLFCDDCDRGYHMYCLNPPVA-EPPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTTTT-TEEECSSSCCEEETTTSSSCCS-SCCSSCCCCHHHHH
T ss_pred ccCcccccCCCC-ceEEcCCCCccccccccCCCcc-CCCCCCeECccccc
Confidence 46 788865555 8999999999999999995433 344 6899999864
No 43
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.66 E-value=0.00055 Score=60.07 Aligned_cols=42 Identities=21% Similarity=0.611 Sum_probs=33.0
Q ss_pred CCCCCCeEeecCCCccccccccccCCCC----CCCCceecCCCCCC
Q 041583 543 DDDGERMVACDICQVWQHTRCNSIADNE----VVPSVFKCRACTAA 584 (586)
Q Consensus 543 dDDGe~MIqCD~C~vWQH~~CvGI~~~~----~~p~~f~C~~C~~~ 584 (586)
.+.++.|++|+.|+.|+|..|+++.... ..+..|.|+.|.++
T Consensus 69 ~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 69 QDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp CCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred cccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 4445689999999999999999987542 34678999999864
No 44
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=96.66 E-value=0.00064 Score=59.42 Aligned_cols=46 Identities=33% Similarity=0.739 Sum_probs=35.7
Q ss_pred Ee-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCC-CceecCCCCC
Q 041583 536 DC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVP-SVFKCRACTA 583 (586)
Q Consensus 536 rC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p-~~f~C~~C~~ 583 (586)
.| +|+...++ +.|+.||.|..++|..|+..+-. .+| ..|+|+.|..
T Consensus 56 ~C~~C~~~~~~-~~ll~Cd~C~~~yH~~Cl~ppl~-~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGED-SKMLVCDTCDKGYHTFCLQPVMK-SVPTNGWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSCC-TTEEECSSSCCEEEGGGSSSCCS-SCCSSCCCCHHHHC
T ss_pred cccccCccCCC-CCeeECCCCCcHHhHHhcCCccc-cCCCCCcCCcCCcC
Confidence 45 68876554 48999999999999999996533 334 6899998864
No 45
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.62 E-value=0.00034 Score=59.63 Aligned_cols=51 Identities=27% Similarity=0.641 Sum_probs=38.5
Q ss_pred CcEEe-ecCCCCCC-CCCeEeecCCCccccccccccCCCC---CCC-CceecCCCCC
Q 041583 533 WTVDC-VCGAKDDD-GERMVACDICQVWQHTRCNSIADNE---VVP-SVFKCRACTA 583 (586)
Q Consensus 533 ~~VrC-iCG~~dDD-Ge~MIqCD~C~vWQH~~CvGI~~~~---~~p-~~f~C~~C~~ 583 (586)
....| +|+..++. ++.||.||.|...+|..|.+.+-.. .+| ..|+|+.|..
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccc
Confidence 34568 89986432 3489999999999999999976432 133 7899999964
No 46
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.21 E-value=0.0029 Score=54.44 Aligned_cols=49 Identities=31% Similarity=0.668 Sum_probs=36.3
Q ss_pred CCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCC
Q 041583 531 DDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 531 d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
++....| +|+.. | .++.||.|..-+|..|+..+-.......|+|+.|..
T Consensus 22 d~n~~~C~vC~~~---g-~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 22 DDSATICRVCQKP---G-DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp SSSSSCCSSSCSS---S-CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred CCCCCcCcCcCCC---C-CEEECCCCCCceecccCCCCCCCCcCCCcCCccccC
Confidence 3344468 89863 3 699999999999999996543322237999999974
No 47
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=95.69 E-value=0.0078 Score=52.51 Aligned_cols=49 Identities=24% Similarity=0.523 Sum_probs=37.3
Q ss_pred CcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCC
Q 041583 533 WTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACT 582 (586)
Q Consensus 533 ~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~ 582 (586)
....| +|+...+. +.||.|+.|...+|..|+++.........|+|+.|.
T Consensus 6 ~~~~C~~C~~~g~~-~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGDL-LDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCCT-TTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCcCCCCCCCC-cCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 33458 89886443 479999999999999999997543234789988874
No 48
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=92.01 E-value=0.026 Score=49.65 Aligned_cols=46 Identities=20% Similarity=0.536 Sum_probs=32.7
Q ss_pred e-ecCCCC-----CCCCCeEeecCCCccccccccccCCCC--C-CCCceecCCCC
Q 041583 537 C-VCGAKD-----DDGERMVACDICQVWQHTRCNSIADNE--V-VPSVFKCRACT 582 (586)
Q Consensus 537 C-iCG~~d-----DDGe~MIqCD~C~vWQH~~CvGI~~~~--~-~p~~f~C~~C~ 582 (586)
| +|.... .+++.||.|+.|...+|..|+++.... . ....|+|+.|.
T Consensus 8 C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 8 CSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp BTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 5 665532 345689999999999999999874211 1 13678888874
No 49
>2rno_A Putative DNA-binding protein; SUMO ligase, sumoylation, metal-BI zinc-finger, ligase; NMR {Oryza sativa subsp}
Probab=90.11 E-value=0.053 Score=47.94 Aligned_cols=45 Identities=18% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCHHHH-HHHHHhhhhhhhhceeeeeeeeeecccccceeccc-eeEEecc
Q 041583 469 VTVDEL-KLIVECSLRDTYCMMEKVVVKEIKMGQNQVFWGAG-DVWVRGW 516 (586)
Q Consensus 469 aTv~eL-K~ea~r~frD~Y~~~r~f~~~~l~~g~e~g~v~sg-~v~vrG~ 516 (586)
+..+-. |+||.+.++|+|++||..+++++ ++ .|++.++ ++.++|+
T Consensus 63 ~~K~~v~kE~vaKIVDDtYRKMqvSgAtDL-AS--k~q~~sd~s~k~k~E 109 (110)
T 2rno_A 63 GRKNSLTKEAVAKIVDDTYRKMQIQCAPDL-AT--RSHSGSDFSFRPIEE 109 (110)
T ss_dssp STTGGGSHHHHHHHHHHHHHHHHCTTCCCS-CT--TCSSCSSSCSCCCTT
T ss_pred cccccccHHHHHHHHHHHHHHHhccCCccc-cc--cCccccCcccccCCC
Confidence 444444 89999999999999999999999 44 5666677 6666664
No 50
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=87.89 E-value=0.084 Score=46.52 Aligned_cols=38 Identities=26% Similarity=0.534 Sum_probs=28.2
Q ss_pred CCCCCeEeecCCCccccccccccCCCC--CC-CCceecCCC
Q 041583 544 DDGERMVACDICQVWQHTRCNSIADNE--VV-PSVFKCRAC 581 (586)
Q Consensus 544 DDGe~MIqCD~C~vWQH~~CvGI~~~~--~~-p~~f~C~~C 581 (586)
.+++.||.|+.|...+|..|++++... .+ ...|+|+.|
T Consensus 18 g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 58 (114)
T 2kwj_A 18 GRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIEC 58 (114)
T ss_dssp CCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGG
T ss_pred CCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCcccc
Confidence 345689999999999999999986321 12 257877766
No 51
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=85.46 E-value=0.25 Score=45.80 Aligned_cols=52 Identities=19% Similarity=0.498 Sum_probs=38.7
Q ss_pred CCCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCC-------CCCCceecCCCCCC
Q 041583 529 GADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNE-------VVPSVFKCRACTAA 584 (586)
Q Consensus 529 g~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~-------~~p~~f~C~~C~~~ 584 (586)
++|...-+| +|+. .| ..+.||.|-.=+|..|+..+-.+ ...+.|.|+.|...
T Consensus 58 d~Dg~~d~C~vC~~---GG-~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 58 DSDGMDEQCRWCAE---GG-NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp CTTSCBCSCSSSCC---CS-SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred cCCCCCCeecccCC---CC-cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 345666678 7874 34 69999999999999999955321 12479999999853
No 52
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=82.04 E-value=0.26 Score=45.02 Aligned_cols=51 Identities=20% Similarity=0.498 Sum_probs=37.6
Q ss_pred CCCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCC-----C--CCCCceecCCCCCC
Q 041583 530 ADDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADN-----E--VVPSVFKCRACTAA 584 (586)
Q Consensus 530 ~d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~-----~--~~p~~f~C~~C~~~ 584 (586)
+|...-+| +|+. |...+.||.|-.=+|..|+...-. + ...+.|.|..|.+.
T Consensus 53 ~Dg~~~~C~vC~d----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 53 SDGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TTSCBSSCTTTCC----CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCCcCeecCC----CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 35555668 8884 446999999999999999985411 0 12489999999764
No 53
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=72.41 E-value=1.4 Score=38.66 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=24.9
Q ss_pred CCCeEeecCCCccccccccccCCCCCCCCceecCC
Q 041583 546 GERMVACDICQVWQHTRCNSIADNEVVPSVFKCRA 580 (586)
Q Consensus 546 Ge~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~ 580 (586)
.+.+||||.|..|--.. .++......|+.|+|..
T Consensus 25 ~~~WVQCD~C~KWRrLP-~~~~~~~~~pd~W~C~m 58 (100)
T 2l7p_A 25 ESAWVRCDDCFKWRRIP-ASVVGSIDESSRWICMN 58 (100)
T ss_dssp SSEEEECTTTCCEEEEC-HHHHTTSTTSSCCCGGG
T ss_pred CCeEEeeCCCCccccCC-hhHccccCCCCCceeCC
Confidence 34799999999998875 44433334679999965
No 54
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=65.92 E-value=3.5 Score=30.25 Aligned_cols=47 Identities=32% Similarity=0.505 Sum_probs=34.9
Q ss_pred EEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 535 VDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 535 VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
..| ||-....+++..+....|+-.+|..|..---. ....||.|+..+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~----~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG----SHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT----TCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHH----cCCcCcCCCCEe
Confidence 347 89887777766666667999999999865422 245799999876
No 55
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=64.34 E-value=14 Score=32.02 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=52.0
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCccchHHHHHHHhcccCCcchHHHHHhhc--CCeec-cCcEEEE
Q 041583 278 QWGVQRLEQAAKAIFTTLEQRNASINSKAKISRRELRDEARKKIGDTGLLDFMIKHI--HKIIL-DNRIVHR 346 (586)
Q Consensus 278 rWs~~r~~~A~~~~v~vLr~~~a~~~~~~wvsr~~LR~aark~IGdtgLLD~~LK~l--~~~~v-g~~vvrr 346 (586)
-++.+.++..++.+++.|.+-=...+-...|+|.+||..+-+.+ ++.+.+.+|..| .|+++ .|..|+-
T Consensus 58 ~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~-~~~~~~~ll~~l~~~g~l~~~~~~v~L 128 (135)
T 2v9v_A 58 AISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRL-PARVYQALLEEWSREGRLQLAANTVAL 128 (135)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTS-CHHHHHHHHHHHHHTTSEEECSSEEEE
T ss_pred EecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccC-CHHHHHHHHHHHHHCCCEEecCCEEEC
Confidence 37999999999999999965222234567899999999886545 899999999987 45555 5555554
No 56
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=62.77 E-value=2 Score=36.58 Aligned_cols=39 Identities=26% Similarity=0.646 Sum_probs=29.0
Q ss_pred cccccCCCCCCcEEeecCCC-------CCCCCCeEeecCCCccccc
Q 041583 523 ELRFEGGADDWTVDCVCGAK-------DDDGERMVACDICQVWQHT 561 (586)
Q Consensus 523 ~~~~e~g~d~~~VrCiCG~~-------dDDGe~MIqCD~C~vWQH~ 561 (586)
++.++.+...|.-.|.||-. ..+|+..++|+.|..|-..
T Consensus 12 Dm~~de~~~~y~ypCrCGd~F~it~edL~~ge~iv~C~sCSL~I~V 57 (83)
T 1yop_A 12 DMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKVAVCPSCSLMIDV 57 (83)
T ss_dssp GSEEETTTTEEEEEETTTEEEEEEHHHHHTTCCEEECSSSCCEEEC
T ss_pred HcEEcCCCCEEEEeCCCCCeEEECHHHHhCCCEEEECCCCccEEEE
Confidence 44444445568888999963 2478899999999999755
No 57
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=62.35 E-value=1.7 Score=37.53 Aligned_cols=41 Identities=17% Similarity=0.611 Sum_probs=30.4
Q ss_pred cccccCCCCCCcEEeecCCC-------CCCCCCeEeecCCCccccccc
Q 041583 523 ELRFEGGADDWTVDCVCGAK-------DDDGERMVACDICQVWQHTRC 563 (586)
Q Consensus 523 ~~~~e~g~d~~~VrCiCG~~-------dDDGe~MIqCD~C~vWQH~~C 563 (586)
++.++.+.+.|.-.|.||-. ..+|+..++|+.|..|--..-
T Consensus 12 Dm~~de~~~~y~ypCrCGd~F~IteedLe~ge~iv~C~sCSL~IkV~y 59 (89)
T 2jr7_A 12 DFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIY 59 (89)
T ss_dssp TSEEETTTTEEEEECTTSSEEEEEHHHHHHTCCEEECTTTCCEEEEEC
T ss_pred HcEEcCCCCEEEEcCCCCCEEEECHHHHhCCCEEEECCCCccEEEEEE
Confidence 44444555678888999984 246888999999999976543
No 58
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=60.63 E-value=2.8 Score=35.67 Aligned_cols=40 Identities=18% Similarity=0.630 Sum_probs=29.8
Q ss_pred cccccCCCCCCcEEeecCCC-------CCCCCCeEeecCCCcccccc
Q 041583 523 ELRFEGGADDWTVDCVCGAK-------DDDGERMVACDICQVWQHTR 562 (586)
Q Consensus 523 ~~~~e~g~d~~~VrCiCG~~-------dDDGe~MIqCD~C~vWQH~~ 562 (586)
++.++.+...|.-.|.||-. ..+|+..++|+.|..|-...
T Consensus 19 Dm~~de~~~~y~y~CrCGd~F~it~edL~~ge~iv~C~sCSL~I~V~ 65 (83)
T 1wge_A 19 DFQYDEDSETYFYPCPCGDNFAITKEDLENGEDVATCPSCSLIIKVI 65 (83)
T ss_dssp GSCCBTTTTEEEECCSSSSCEEEEHHHHHTTCCEEECTTTCCEEEEE
T ss_pred HceEccCCCEEEEeCCCCCEEEECHHHHhCCCEEEECCCCceEEEEE
Confidence 45554445567788999985 24788899999999997653
No 59
>3ivp_A Putative transposon-related DNA-binding protein; APC62618, clostridium diffic structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile}
Probab=54.54 E-value=6 Score=33.89 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=66.6
Q ss_pred hhhhhHHHHhhhhhcceeEEeecccccccchhhhhccccCCccCCccccccccCCCCCCHHHHHHHHHHhhccchhhhhc
Q 041583 165 QIMNLFDHLCTILHTQKISVHDVLVKRCMDLRLLHCVTYGCSWFGKWDYKFCHGSFGVTEHKYNRAIQILSSLELKRIIH 244 (586)
Q Consensus 165 ~iM~~WDrlC~~L~~RkVSv~DvSkK~~mdlRlLh~va~g~~W~g~WGY~fg~Gsfgvt~~~Y~~Aie~lss~pL~~~~~ 244 (586)
+.|.|.+||=.....+.+|..+++++-|+.-.-+..+-. |....+.+...+-.++| +++++.|+.
T Consensus 9 ~~~~~g~~lk~~R~~~glsq~~lA~~~gis~~~is~~E~--------------g~~~p~~~~l~~ia~~l-~v~~~~l~~ 73 (126)
T 3ivp_A 9 DFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIEN--------------KGQHPSLQVLYDLVSLL-NVSVDEFFL 73 (126)
T ss_dssp CTHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHH--------------SCCCCCHHHHHHHHHHH-TCCSHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHC--------------CCCCCCHHHHHHHHHHH-CcCHHHHhC
Confidence 568899999888888999999999999987776665544 34457788887777777 478888876
Q ss_pred ccCCCCcccchhhhhhhcccccccccc
Q 041583 245 DFGNTGRGRVIGKIIHLYMNASDTQLI 271 (586)
Q Consensus 245 ~~~~~~~~~~~~~ii~~Y~~lS~~~L~ 271 (586)
.-...........++..+..+++..+.
T Consensus 74 ~~~~~~~~~~~~~l~~~~~~l~~~~~~ 100 (126)
T 3ivp_A 74 PASSQVKSTKRRQLENKIDNFTDADLV 100 (126)
T ss_dssp CCCCCCCCHHHHHHHHHTTTCCHHHHH
T ss_pred CCccccchHHHHHHHHHHHcCCHHHHH
Confidence 533323344556777788888665544
No 60
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299, PSI-2, structure initiative; HET: MSE GOL; 2.23A {Sinorhizobium meliloti}
Probab=51.43 E-value=26 Score=35.92 Aligned_cols=106 Identities=13% Similarity=0.189 Sum_probs=71.3
Q ss_pred ccccCcccccceeeccCccceEeeecCCCCCcccchhhhhhhHHHHhhhhhcceeEEeecccccccch------hhhhcc
Q 041583 128 TLEHCDHILHGVVHCNGFGHLLSISGSKDGSNYLCEEQIMNLFDHLCTILHTQKISVHDVLVKRCMDL------RLLHCV 201 (586)
Q Consensus 128 ~~~~~~HllHGviH~NGfGHLl~vnG~eggS~~lsG~~iM~~WDrlC~~L~~RkVSv~DvSkK~~mdl------RlLh~v 201 (586)
.++.|.++ +.+|.|-|+.+.|++|--+ |.+| .+|...|..|-+.|.=+..=.+-++ |.....
T Consensus 73 L~~lQ~~~-----~~~~~~vlIvfEG~DgAGK---gt~I----k~L~e~Ldprg~~V~~~~~Pt~eE~~~~yl~R~~~~L 140 (304)
T 3czq_A 73 LVKVQFWM-----QATGKRVMAVFEGRDAAGK---GGAI----HATTANMNPRSARVVALTKPTETERGQWYFQRYVATF 140 (304)
T ss_dssp HHHHHHHH-----HHHCCCEEEEEEESTTSSH---HHHH----HHHHTTSCTTTEEEEECCSCCHHHHTSCTTHHHHTTC
T ss_pred HHHHHHHH-----HHcCCCeEEEEeCCCCCCH---HHHH----HHHHHHhcccCCeEEEeCCcChHHHhchHHHHHHHhc
Confidence 34455544 3468899999999998766 4555 4778888888777766554433332 333333
Q ss_pred -ccC------CccCCccccccccCCCCCCHHHHHHHHHHhh---------ccchhhhhcccC
Q 041583 202 -TYG------CSWFGKWDYKFCHGSFGVTEHKYNRAIQILS---------SLELKRIIHDFG 247 (586)
Q Consensus 202 -a~g------~~W~g~WGY~fg~Gsfgvt~~~Y~~Aie~ls---------s~pL~~~~~~~~ 247 (586)
+.| .+||++-+|.-..| +++.+.|++.++.|. ++|+-.|+-|++
T Consensus 141 P~~G~IvIfDRswYs~v~~~rv~g--~~~~~e~~~~~~~In~FE~~L~~~G~~~lKf~L~Is 200 (304)
T 3czq_A 141 PTAGEFVLFDRSWYNRAGVEPVMG--FCTPDQYEQFLKEAPRFEEMIANEGIHLFKFWINIG 200 (304)
T ss_dssp CCTTCEEEEEECGGGGTTHHHHHT--SSCHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEECC
T ss_pred ccCCeEEEEECCcchHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEECC
Confidence 555 59999999987655 567888888887763 456666777755
No 61
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=51.02 E-value=5.4 Score=34.37 Aligned_cols=49 Identities=20% Similarity=0.505 Sum_probs=35.4
Q ss_pred CcEEe-ecCCCCCCCCCeEeecCCCccccccccccC---CCC---------CCCCceecCCCCC
Q 041583 533 WTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIA---DNE---------VVPSVFKCRACTA 583 (586)
Q Consensus 533 ~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~---~~~---------~~p~~f~C~~C~~ 583 (586)
...-| +|..- + .+-++.|..|..-+|..|..-. +.+ ....-|.|+.|..
T Consensus 14 ~D~~C~VC~~~-t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVW-T-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCC-C-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCccccc-c-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 34458 89874 3 3369999999999999998553 222 1247899999963
No 62
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=50.22 E-value=6.4 Score=33.29 Aligned_cols=36 Identities=25% Similarity=0.686 Sum_probs=28.6
Q ss_pred CCCCCcEEe-ecCCCCCCCCCeEeecC--CCcccccccccc
Q 041583 529 GADDWTVDC-VCGAKDDDGERMVACDI--CQVWQHTRCNSI 566 (586)
Q Consensus 529 g~d~~~VrC-iCG~~dDDGe~MIqCD~--C~vWQH~~CvGI 566 (586)
..+.|...| +|+.+ ..| --|||.. |...+|..|...
T Consensus 12 p~~R~~l~C~iC~~~-~~G-AciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 12 PPARWKLTCYLCKQK-GVG-ASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCCCCCCBTTTTBC-CSS-CEEECSCTTTCCEEEHHHHHH
T ss_pred ChHHhcCCCcCCCCC-CCc-EeEecCCCCCCCcCcHHHHHH
Confidence 346789999 99864 235 7999986 999999999754
No 63
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=49.40 E-value=3.7 Score=28.10 Aligned_cols=13 Identities=38% Similarity=1.249 Sum_probs=9.5
Q ss_pred CCCCCCCcceEec
Q 041583 87 SSHPFCNLCRCVG 99 (586)
Q Consensus 87 S~~~~Cd~Cr~vG 99 (586)
|.+|||+.|-+.|
T Consensus 1 ~~RpYCe~CE~FG 13 (26)
T 2hqh_E 1 GSRPYCEICEMFG 13 (26)
T ss_dssp ---CEETTTTEES
T ss_pred CCCccchHHHHhC
Confidence 4689999999998
No 64
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=49.04 E-value=16 Score=29.99 Aligned_cols=32 Identities=25% Similarity=0.610 Sum_probs=22.5
Q ss_pred CCeEeec--CCCccccccccccCCCCCCCCceecCC
Q 041583 547 ERMVACD--ICQVWQHTRCNSIADNEVVPSVFKCRA 580 (586)
Q Consensus 547 e~MIqCD--~C~vWQH~~CvGI~~~~~~p~~f~C~~ 580 (586)
..+|||| .|..|--.. .++.. ...|+.|+|..
T Consensus 16 ~~WVQCd~p~C~KWR~LP-~~~~~-~~lpd~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCGKWRRLC-GNIDP-SVLPDNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTCCEEECC-SSCCT-TTSCTTCCGGG
T ss_pred CeEEEeCccccCcccCCc-ccccc-ccCCCcCEeCC
Confidence 4799999 999998662 22221 24689999964
No 65
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=42.18 E-value=8.8 Score=29.21 Aligned_cols=15 Identities=20% Similarity=0.696 Sum_probs=12.1
Q ss_pred CCCCCceecCCCCCC
Q 041583 570 EVVPSVFKCRACTAA 584 (586)
Q Consensus 570 ~~~p~~f~C~~C~~~ 584 (586)
+..|+.|.||.|...
T Consensus 25 ~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 25 DQLPDDWCCPVCGVS 39 (46)
T ss_dssp GGSCTTCBCTTTCCB
T ss_pred hhCCCCCcCcCCCCc
Confidence 357899999999853
No 66
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=42.07 E-value=5.9 Score=28.90 Aligned_cols=48 Identities=15% Similarity=0.380 Sum_probs=34.3
Q ss_pred EEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCCC
Q 041583 535 VDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAVA 586 (586)
Q Consensus 535 VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l~ 586 (586)
..| ||-....+++..+..-.|+-.+|..|+.---. ....||.|+..+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLK----EGYRCPLCSGPSS 54 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHH----HTCCCTTSCCSSC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHH----cCCcCCCCCCcCC
Confidence 447 88876655555677778999999999865322 1268999998763
No 67
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=37.58 E-value=9 Score=31.53 Aligned_cols=50 Identities=20% Similarity=0.391 Sum_probs=34.0
Q ss_pred CCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 531 DDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 531 d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
.+....| ||-....+++..+.- .|+-.+|..|+.---. ....||.|+..+
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l-~C~H~Fh~~Ci~~wl~----~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATEL-PCHHYFHKPCVSIWLQ----KSGTCPVCRCMF 87 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEE-TTTEEEEHHHHHHHHT----TTCBCTTTCCBS
T ss_pred cCCCCCCcccChhhcCCCcEEec-CCCChHHHHHHHHHHH----cCCcCcCcCccC
Confidence 3445678 898766666544443 4999999999865322 234899998765
No 68
>1r7c_A Genome polyprotein; membrane anchor domain, HCV NS5A protein, structure, peptide, membrane protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 1r7d_A 1r7e_A 1r7f_A 1r7g_A
Probab=36.65 E-value=14 Score=26.28 Aligned_cols=17 Identities=18% Similarity=0.618 Sum_probs=13.6
Q ss_pred chhhhhhhHHHHhhhhh
Q 041583 162 CEEQIMNLFDHLCTILH 178 (586)
Q Consensus 162 sG~~iM~~WDrlC~~L~ 178 (586)
+|.=|-++||.+|+.|-
T Consensus 1 ~~swL~~iwdWvctvLs 17 (31)
T 1r7c_A 1 SGSWLRDIWDWICEVLS 17 (31)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHH
Confidence 35567899999999874
No 69
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=36.47 E-value=19 Score=31.29 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=18.3
Q ss_pred eeeCCCCCHHHHHHHHHhhhh
Q 041583 463 IVAPKDVTVDELKLIVECSLR 483 (586)
Q Consensus 463 v~lp~~aTv~eLK~ea~r~fr 483 (586)
|.+++++||.|||+..+..+.
T Consensus 22 v~V~~~~TV~dLK~~I~~~~~ 42 (105)
T 1v2y_A 22 VVVVQNATVLDLKKAIQRYVQ 42 (105)
T ss_dssp EEECTTCBHHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHHhC
Confidence 667899999999999998763
No 70
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=35.14 E-value=7.6 Score=33.71 Aligned_cols=47 Identities=26% Similarity=0.639 Sum_probs=35.3
Q ss_pred EEe-ecCCC---CCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCC
Q 041583 535 VDC-VCGAK---DDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAA 584 (586)
Q Consensus 535 VrC-iCG~~---dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~ 584 (586)
-.| +||-. ..||+..|+|..|.+-.=..|+-...++ -.-.|+.|.-+
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErke---G~q~CpqCktr 67 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERRE---GTQNCPQCKTR 67 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHT---SCSSCTTTCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhc---cCccccccCCc
Confidence 458 99975 5789999999999998888888765433 33467777643
No 71
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=34.20 E-value=16 Score=30.86 Aligned_cols=35 Identities=23% Similarity=0.501 Sum_probs=28.5
Q ss_pred cEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCC
Q 041583 534 TVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNE 570 (586)
Q Consensus 534 ~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~ 570 (586)
...| .|+.. ..| .+-.|+.|+.-.|..|+..++..
T Consensus 47 ~~~C~~C~~~-~~~-~~Y~C~~C~f~lH~~Ca~~p~~~ 82 (89)
T 1v5n_A 47 VYTCDKCEEE-GTI-WSYHCDECDFDLHAKCALNEDTK 82 (89)
T ss_dssp SCCCTTTSCC-CCS-CEEECTTTCCCCCHHHHHCSSCS
T ss_pred CeEeCCCCCc-CCC-cEEEcCCCCCeEcHHhcCCCCcc
Confidence 3579 89985 345 88999999999999999887643
No 72
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=33.43 E-value=35 Score=29.11 Aligned_cols=46 Identities=24% Similarity=0.609 Sum_probs=33.4
Q ss_pred EEeecCCC--C--CCC-CCeEeecCCC-ccccccccccCCCCCCCCceecCCCCC
Q 041583 535 VDCVCGAK--D--DDG-ERMVACDICQ-VWQHTRCNSIADNEVVPSVFKCRACTA 583 (586)
Q Consensus 535 VrCiCG~~--d--DDG-e~MIqCD~C~-vWQH~~CvGI~~~~~~p~~f~C~~C~~ 583 (586)
..|+|..- . ++| -.+|-|..|. .=-|..|..+. ..++.|.|..|..
T Consensus 27 ~~Clc~~GR~~~~~~~~W~L~lC~~Cgs~gtH~~Cs~l~---~~~~~weC~~C~~ 78 (85)
T 1weq_A 27 PICLYEQGRDSFEDEGRWRLILCATCGSHGTHRDCSSLR---PNSKKWECNECLP 78 (85)
T ss_dssp SCCCSTTCSSCCBSSSTTBCEECSSSCCCEECSGGGTCC---TTCSCCCCTTTSC
T ss_pred cccCCCCCcccccCCCCEEEEeCcccCCchhHHHHhCCc---CCCCCEECCcCcc
Confidence 45777542 1 123 3688888888 67899999986 3469999999985
No 73
>1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A
Probab=32.55 E-value=68 Score=31.33 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=50.7
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCccchHHHHHHHhcccCCcchHHHHHhhc--CCeec-cCcEEEE
Q 041583 278 QWGVQRLEQAAKAIFTTLEQRNASINSKAKISRRELRDEARKKIGDTGLLDFMIKHI--HKIIL-DNRIVHR 346 (586)
Q Consensus 278 rWs~~r~~~A~~~~v~vLr~~~a~~~~~~wvsr~~LR~aark~IGdtgLLD~~LK~l--~~~~v-g~~vvrr 346 (586)
-++.+.++...+.++++|.+-=+..+-...|++.+||..+-+.+ ++.|++.+|..| .|.+. .|..|+.
T Consensus 58 ~~~~~~~~~~~~~l~~~L~~~H~~~P~~~G~~~~~L~~~~~~~~-~~~l~~~ll~~l~~~g~l~~~~~~v~l 128 (258)
T 1lva_A 58 AISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRL-PARVYQALLEEWSREGRLQLAANTVAL 128 (258)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTS-CHHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred EEcHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHhccccC-CHHHHHHHHHHHHHCCCEEecCCEEeC
Confidence 37899999999999999975222223346699999999886544 789999999988 66554 5555554
No 74
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=31.71 E-value=13 Score=39.42 Aligned_cols=53 Identities=21% Similarity=0.451 Sum_probs=41.3
Q ss_pred CCCCCCcEEe-ecCCCCCCCCCeEeec--CCCccccccccccCCCCC------CCCceecCCCCCC
Q 041583 528 GGADDWTVDC-VCGAKDDDGERMVACD--ICQVWQHTRCNSIADNEV------VPSVFKCRACTAA 584 (586)
Q Consensus 528 ~g~d~~~VrC-iCG~~dDDGe~MIqCD--~C~vWQH~~CvGI~~~~~------~p~~f~C~~C~~~ 584 (586)
-++|.+..+| +||. |..++.|| .|..-+=..|+...-.+. ..+.|.|-.|.+.
T Consensus 87 ~D~DG~~~yCr~C~~----Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 87 YDDDGYQSYCSICCS----GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp BCSSSSBCSCTTTCC----CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred cCCCCCcccceEcCC----CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 3457788899 8995 44799999 899888889987765432 2489999999875
No 75
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.23 E-value=27 Score=27.28 Aligned_cols=48 Identities=21% Similarity=0.355 Sum_probs=31.9
Q ss_pred CcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 533 WTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 533 ~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
....| ||-....++...+. -.|+-.+|..|+.---. ....||.|+..+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~-~~C~H~fc~~Ci~~~~~----~~~~CP~Cr~~~ 62 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQ-LPCNHLFHDSCIVPWLE----QHDSCPVCRKSL 62 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEE-CTTSCEEETTTTHHHHT----TTCSCTTTCCCC
T ss_pred CCCCCeeCCccccCCCCEEE-eCCCCeecHHHHHHHHH----cCCcCcCcCCcc
Confidence 44568 89887666643322 35888899999864322 224899998765
No 76
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=27.91 E-value=11 Score=28.92 Aligned_cols=50 Identities=24% Similarity=0.390 Sum_probs=32.6
Q ss_pred CCCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 531 DDWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 531 d~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
++....| ||-...++++. +..-.|+-.+|..|+.---. ....||.|+..+
T Consensus 11 ~~~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~----~~~~CP~Cr~~~ 61 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGED-VRRLPCMHLFHQVCVDQWLI----TNKKCPICRVDI 61 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSC-EEECTTSCEEEHHHHHHHHH----HCSBCTTTCSBS
T ss_pred CCCCCCCeeCCccccCCCc-EEEeCCCCHHHHHHHHHHHH----cCCCCcCcCccc
Confidence 4445668 89876655543 34446998999999864311 122599998765
No 77
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=26.06 E-value=16 Score=33.00 Aligned_cols=33 Identities=27% Similarity=0.784 Sum_probs=24.1
Q ss_pred CCCCCCcEEeecCCC----CC---CCCCeEeecCCCccccc
Q 041583 528 GGADDWTVDCVCGAK----DD---DGERMVACDICQVWQHT 561 (586)
Q Consensus 528 ~g~d~~~VrCiCG~~----dD---DGe~MIqCD~C~vWQH~ 561 (586)
++...+...|.||.. .+ +| ..|.|+.|..|...
T Consensus 106 e~~~~f~~~CrCG~~f~i~~~~l~~~-~~v~C~sCSl~~~v 145 (155)
T 2l6l_A 106 EGDHSFYLSCRCGGKYSVSKDEAEEV-SLISCDTCSLIIEL 145 (155)
T ss_dssp TTTTEEEEECSSSCEEEEETTHHHHC-CEEECSSSSCEEEE
T ss_pred cCCcEEEEcCCCCCeEEecHHHhCCC-CEEECCCCceEEEE
Confidence 344678899999974 12 23 68999999998743
No 78
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=26.00 E-value=22 Score=33.57 Aligned_cols=53 Identities=17% Similarity=0.449 Sum_probs=41.6
Q ss_pred CCCCCCcEEe-ecCCCCCCCCCeEeec--CCCccccccccccCCCCC------CCCceecCCCCCC
Q 041583 528 GGADDWTVDC-VCGAKDDDGERMVACD--ICQVWQHTRCNSIADNEV------VPSVFKCRACTAA 584 (586)
Q Consensus 528 ~g~d~~~VrC-iCG~~dDDGe~MIqCD--~C~vWQH~~CvGI~~~~~------~p~~f~C~~C~~~ 584 (586)
-++|....+| +||. |..++.|| .|..=+=..|+...-.+. ..+.|.|-.|.+.
T Consensus 73 ~DeDG~~~yC~wC~~----Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 73 YDDDGYQSYCTICCG----GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp BCTTSSBSSCTTTSC----CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred cCCCCCcceeeEecC----CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 3557777899 8995 55799999 799999999987765442 3589999999875
No 79
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=25.38 E-value=32 Score=28.02 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=59.2
Q ss_pred hHHHHhhhhhcceeEEeecccccccchhh----hhccccCCccCCccccccccCCCCCCHHHHHHHHHHhhccchhhhhc
Q 041583 169 LFDHLCTILHTQKISVHDVLVKRCMDLRL----LHCVTYGCSWFGKWDYKFCHGSFGVTEHKYNRAIQILSSLELKRIIH 244 (586)
Q Consensus 169 ~WDrlC~~L~~RkVSv~DvSkK~~mdlRl----Lh~va~g~~W~g~WGY~fg~Gsfgvt~~~Y~~Aie~lss~pL~~~~~ 244 (586)
|-+||-.....+.+|..+++++-|+...- +..+ -+|.-..+.+...+-.++| +++++.|+.
T Consensus 2 ~g~~lk~~R~~~glsq~~lA~~~gis~~~~~~~is~~--------------E~g~~~p~~~~l~~la~~l-~v~~~~l~~ 66 (98)
T 3lfp_A 2 LIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQY--------------EKGKHAPDFEMANRLAKVL-KIPVSYLYT 66 (98)
T ss_dssp CHHHHHHHHHHHTCCHHHHHHHTTCCHHHHHHHHHHH--------------HHTSSCCCHHHHHHHHHHH-TSCGGGGGC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCCCcchhhhHHHHH--------------HCCCCCCCHHHHHHHHHHH-CcCHHHHhC
Confidence 34666666677889999999999987655 4433 3344456777777777766 478888866
Q ss_pred ccCCCCcccchhhhhhhccccccccccch
Q 041583 245 DFGNTGRGRVIGKIIHLYMNASDTQLITI 273 (586)
Q Consensus 245 ~~~~~~~~~~~~~ii~~Y~~lS~~~L~t~ 273 (586)
. ......++..|+++++.....+
T Consensus 67 ~------~~~~~~~~~~~~~l~~~~~~~~ 89 (98)
T 3lfp_A 67 P------EDDLAQIILTWNELNEQERKRI 89 (98)
T ss_dssp C------CHHHHHHHHHHTTCCHHHHHHH
T ss_pred C------ChhHHHHHHHHHhCCHHHHHHH
Confidence 3 3457888999999987655444
No 80
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=24.31 E-value=1.2e+02 Score=24.71 Aligned_cols=51 Identities=16% Similarity=0.356 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHhhccccCCC--CccchHHHHHHHhcccC-------CcchHHHHHhhcC
Q 041583 283 RLEQAAKAIFTTLEQRNASINSK--AKISRRELRDEARKKIG-------DTGLLDFMIKHIH 335 (586)
Q Consensus 283 r~~~A~~~~v~vLr~~~a~~~~~--~wvsr~~LR~aark~IG-------dtgLLD~~LK~l~ 335 (586)
.++.+.+.+.++.+.-- . ..| .-||+.+||...++.+| ++.-+|-+++.++
T Consensus 4 ~le~~~~~l~~~F~~fd-~-~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D 63 (93)
T 4eto_A 4 PLEKALDVMVSTFHKYS-G-KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD 63 (93)
T ss_dssp HHHHHHHHHHHHHHHHH-T-SSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHc-c-cCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHC
Confidence 46778888888887642 1 123 48999999999997454 4567888888764
No 81
>1xax_A Hypothetical UPF0054 protein HI0004; structural genomics, MMP, hydrolase, protein structure initiative, S2F, structure 2 function project; NMR {Haemophilus influenzae}
Probab=23.63 E-value=14 Score=34.42 Aligned_cols=14 Identities=36% Similarity=0.961 Sum_probs=12.7
Q ss_pred cccceeeccCccce
Q 041583 135 ILHGVVHCNGFGHL 148 (586)
Q Consensus 135 llHGviH~NGfGHL 148 (586)
+.||+.|..||-|-
T Consensus 112 ~vHG~LHLlGyDH~ 125 (154)
T 1xax_A 112 VVHGSLHLLGYDHI 125 (154)
T ss_dssp HHHHHHTTTCCCCC
T ss_pred HHHHHHHhcCCCCC
Confidence 57999999999994
No 82
>1xm5_A Hypothetical UPF0054 protein YBEY; structural genomics, protein structure initiative, nysgxrc target T842, PFAM family UPF0054, PSI; 2.70A {Escherichia coli} SCOP: d.92.1.15
Probab=23.32 E-value=13 Score=34.60 Aligned_cols=14 Identities=36% Similarity=0.961 Sum_probs=12.7
Q ss_pred cccceeeccCccce
Q 041583 135 ILHGVVHCNGFGHL 148 (586)
Q Consensus 135 llHGviH~NGfGHL 148 (586)
+.||+.|..||-|-
T Consensus 112 ~vHG~LHLlGyDH~ 125 (155)
T 1xm5_A 112 VVHGSLHLLGYDHI 125 (155)
T ss_dssp HHHHHHHHTTCCCS
T ss_pred HHHHHHHhcCCCCC
Confidence 57999999999994
No 83
>1oz9_A Hypothetical protein AQ_1354; matrix metalloproteinase type fold, structural genomics, BSG structure funded by NIH; 1.89A {Aquifex aeolicus} SCOP: d.92.1.15
Probab=22.37 E-value=14 Score=34.12 Aligned_cols=14 Identities=50% Similarity=0.985 Sum_probs=12.4
Q ss_pred cccceeeccCccce
Q 041583 135 ILHGVVHCNGFGHL 148 (586)
Q Consensus 135 llHGviH~NGfGHL 148 (586)
+.||+.|..||-|-
T Consensus 113 ~vHG~LHLlGyDH~ 126 (150)
T 1oz9_A 113 IVHGIVHLLGYDHE 126 (150)
T ss_dssp HHHHHHHHTTCCST
T ss_pred HHHHHHHhcCCCCC
Confidence 46999999999994
No 84
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.23 E-value=20 Score=27.77 Aligned_cols=47 Identities=21% Similarity=0.348 Sum_probs=31.8
Q ss_pred cEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 534 TVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 534 ~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
...| ||-....++...+.. .|+-.+|..|+.---. ....||.|+..+
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~----~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLE----VRKVCPLCNMPV 62 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHH----HCSBCTTTCCBC
T ss_pred CCCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHH----cCCcCCCcCccc
Confidence 3468 898876666555443 4898999999864321 112799998765
No 85
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=21.62 E-value=39 Score=31.87 Aligned_cols=64 Identities=22% Similarity=0.325 Sum_probs=50.8
Q ss_pred ccccchhhhhccchhhHHHHHHHHHHHHHhhccccCCCCccchHHHHHHHhcccCCcc----hHHHHHhhcCCe
Q 041583 268 TQLITISDLLQWGVQRLEQAAKAIFTTLEQRNASINSKAKISRRELRDEARKKIGDTG----LLDFMIKHIHKI 337 (586)
Q Consensus 268 ~~L~t~~dL~rWs~~r~~~A~~~~v~vLr~~~a~~~~~~wvsr~~LR~aark~IGdtg----LLD~~LK~l~~~ 337 (586)
.+..|+.|+|-=.=+++-.|++-++++|.+.- +.++.++||.+...|+.+|. .|+=|+..+|..
T Consensus 8 ~~~~~l~dlf~~~L~Diy~aE~q~~~aL~~~~------~~a~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~ 75 (173)
T 2gyq_A 8 RDIQTMEDLLLHGLRDIYYAEQQITKALPKMI------EQATNRDLSQGLTSHLEETQKQIERLDQVFKKLGQK 75 (173)
T ss_dssp TCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 35578888887556778889999999997652 44677999999999988884 788888888764
No 86
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=21.20 E-value=56 Score=24.78 Aligned_cols=20 Identities=10% Similarity=0.124 Sum_probs=16.5
Q ss_pred eeeCCCCCHHHHHHHHHhhh
Q 041583 463 IVAPKDVTVDELKLIVECSL 482 (586)
Q Consensus 463 v~lp~~aTv~eLK~ea~r~f 482 (586)
+-+++++||.+||...+...
T Consensus 15 i~v~~~~tv~~lK~~i~~~~ 34 (76)
T 3a9j_A 15 LEVEPSDTIENVKAKIQDKE 34 (76)
T ss_dssp EECCTTCBHHHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHHH
Confidence 56788999999999987543
No 87
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=20.77 E-value=1.3e+02 Score=24.83 Aligned_cols=53 Identities=26% Similarity=0.392 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHhhccccCCCCccchHHHHHHHhccc----C---CcchHHHHHhhcC
Q 041583 283 RLEQAAKAIFTTLEQRNASINSKAKISRRELRDEARKKI----G---DTGLLDFMIKHIH 335 (586)
Q Consensus 283 r~~~A~~~~v~vLr~~~a~~~~~~wvsr~~LR~aark~I----G---dtgLLD~~LK~l~ 335 (586)
.++.+.+.+.++.+.---....+.-||+.+||..+++.. | +..-+|-+++.++
T Consensus 5 ~le~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D 64 (98)
T 3n22_A 5 SLEQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLD 64 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhC
Confidence 577888888888876310011123899999999998633 3 3567888887763
No 88
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.41 E-value=18 Score=28.19 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=33.6
Q ss_pred CCcEEe-ecCCCCCCCCCeEeecCCCccccccccccCCCCCCCCceecCCCCCCC
Q 041583 532 DWTVDC-VCGAKDDDGERMVACDICQVWQHTRCNSIADNEVVPSVFKCRACTAAV 585 (586)
Q Consensus 532 ~~~VrC-iCG~~dDDGe~MIqCD~C~vWQH~~CvGI~~~~~~p~~f~C~~C~~~l 585 (586)
.....| ||-...++++ .+..-.|+--+|..|+.---. ....||.|+..+
T Consensus 21 ~~~~~C~IC~~~~~~~~-~~~~l~C~H~fh~~Ci~~w~~----~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQ-LLRVLPCNHEFHAKCVDKWLK----ANRTCPICRADS 70 (75)
T ss_dssp SSCCEETTTTEECCBTC-EEEEETTTEEEETTHHHHHHH----HCSSCTTTCCCC
T ss_pred CCCCCCeECCcccCCCC-eEEEECCCCHhHHHHHHHHHH----cCCcCcCcCCcC
Confidence 345678 8988766664 445556998999999864321 124799998775
No 89
>3czp_A Putative polyphosphate kinase 2; PPK2, MCSG, PSI-2, structural protein structure initiative, midwest center for structural genomics; HET: MSE; 2.00A {Pseudomonas aeruginosa PAO1}
Probab=20.00 E-value=1.4e+02 Score=32.58 Aligned_cols=140 Identities=11% Similarity=0.146 Sum_probs=87.6
Q ss_pred eeccCccceEeeecCCCCCcccchhhhhhhHHHHhhhhhcceeEEeecccccccch-------hhhhccccC------Cc
Q 041583 140 VHCNGFGHLLSISGSKDGSNYLCEEQIMNLFDHLCTILHTQKISVHDVLVKRCMDL-------RLLHCVTYG------CS 206 (586)
Q Consensus 140 iH~NGfGHLl~vnG~eggS~~lsG~~iM~~WDrlC~~L~~RkVSv~DvSkK~~mdl-------RlLh~va~g------~~ 206 (586)
++.+|.|-|+-+.|++|.-+ |.+| .+|...|..|.+.|.=++.=-.-|. +.-|.=+.| .|
T Consensus 294 ~~~~~~~vlIvfEG~DaAGK---g~~I----k~l~~~ldprg~~V~~~~~Pt~~E~~~~yl~R~~~~lP~~G~i~IfDRs 366 (500)
T 3czp_A 294 KRFRQHSLVAVFEGNDAAGK---GGAI----RRVTDALDPRQYHIVPIAAPTEEERAQPYLWRFWRHIPARRQFTIFDRS 366 (500)
T ss_dssp GGGGGCEEEEEEEESTTSCH---HHHH----HHHHTTSCGGGCEEEECCSCCHHHHTSCTTHHHHTTCCCTTCEEEEESC
T ss_pred HHhCCCCEEEEEeccCCCCH---HHHH----HHHHHhcCccCCeEEEeCCCChhhhcchHHHHHHHhCCCCCeEEEEeCc
Confidence 34578999999999988765 5555 5778889888888876655433322 112222344 59
Q ss_pred cCCccccccccCCCCCCHHHHHHHHHHhhcc---------chhhhhcccCCCCcccchhhhhhhcccccccccc----ch
Q 041583 207 WFGKWDYKFCHGSFGVTEHKYNRAIQILSSL---------ELKRIIHDFGNTGRGRVIGKIIHLYMNASDTQLI----TI 273 (586)
Q Consensus 207 W~g~WGY~fg~Gsfgvt~~~Y~~Aie~lss~---------pL~~~~~~~~~~~~~~~~~~ii~~Y~~lS~~~L~----t~ 273 (586)
||++=+|..-.|- ++.+.|.++++.|..+ |+-.|+-|++ +..+...+-.+ -+.|++ |.
T Consensus 367 wY~~~~v~rv~g~--~~~~~~~~~~~~i~~FE~~L~~~g~~i~Kf~L~is---~eeQ~~R~~~R----~~~p~k~Wk~s~ 437 (500)
T 3czp_A 367 WYGRVLVERIEGF--CAPADWLRAYGEINDFEEQLSEYGIIVVKFWLAID---KQTQMERFKER----EKTPYKRYKITE 437 (500)
T ss_dssp GGGGGTHHHHHTS--SCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEECC---HHHHHHHHHHH----HHSSCTTSCCCS
T ss_pred chhhHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHhhCCCeEEEEEEECC---HHHHHHHHHHH----hcCCcccCCCCH
Confidence 9999999876663 4689899888876554 6666666655 23333333322 222232 33
Q ss_pred hhhhc---cchhhHHHHHHHHHHHHHh
Q 041583 274 SDLLQ---WGVQRLEQAAKAIFTTLEQ 297 (586)
Q Consensus 274 ~dL~r---Ws~~r~~~A~~~~v~vLr~ 297 (586)
.|+-. | ++|..|.+.|+.....
T Consensus 438 ~D~~~~~~w--~~y~~a~~~~l~~T~t 462 (500)
T 3czp_A 438 EDWRNRDKW--DQYVDAVGDMVDRTST 462 (500)
T ss_dssp STTTGGGGH--HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhH--HHHHHHHHHHHHHhcc
Confidence 44432 4 4577888888776543
Done!