BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041589
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 177/431 (41%), Gaps = 118/431 (27%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQ-FVLLG--- 58
TG + A K ISKR++ + +K+ + REV +++ L PNI+K +ED F L+G
Sbjct: 74 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVY 132
Query: 59 --------------------------------------VMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L S ++A +
Sbjct: 133 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 192
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVPPIW 133
DFGLS E ++G+ YYIAPEVL +Y ++ D+WS VILYILL G PP
Sbjct: 193 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
Query: 134 AETEQGVAQAILKGEINFQ----------------------------------HD----- 154
E + + + KG+ F+ H+
Sbjct: 253 GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 312
Query: 155 -------PFPSISSSAIELVRRMLTQ--IQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDN 205
PS+ ++ + + + TQ Q E ++L F +MD +
Sbjct: 313 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNG 372
Query: 206 SGTLTYDELREGL-----------AKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAM 254
G L EL EG + L ++ E +V Q + A D D NG I+Y EF T
Sbjct: 373 DGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 432
Query: 255 TQRHKL---ERFEISLQSHPVDELGKAFKDD-----GMGDDATIATIKEIMSEDDRDKDG 306
R L ER E + + D GK + G+ D T K ++SE D++ DG
Sbjct: 433 MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-VDSETWKSVLSEVDKNNDG 491
Query: 307 RISYDEFRSMM 317
+ +DEF+ M+
Sbjct: 492 EVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 177/431 (41%), Gaps = 118/431 (27%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQ-FVLLG--- 58
TG + A K ISKR++ + +K+ + REV +++ L PNI+K +ED F L+G
Sbjct: 73 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVY 131
Query: 59 --------------------------------------VMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L S ++A +
Sbjct: 132 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 191
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVPPIW 133
DFGLS E ++G+ YYIAPEVL +Y ++ D+WS VILYILL G PP
Sbjct: 192 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
Query: 134 AETEQGVAQAILKGEINFQ----------------------------------HD----- 154
E + + + KG+ F+ H+
Sbjct: 252 GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 311
Query: 155 -------PFPSISSSAIELVRRMLTQ--IQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDN 205
PS+ ++ + + + TQ Q E ++L F +MD +
Sbjct: 312 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNG 371
Query: 206 SGTLTYDELREGL-----------AKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAM 254
G L EL EG + L ++ E +V Q + A D D NG I+Y EF T
Sbjct: 372 DGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 431
Query: 255 TQRHKL---ERFEISLQSHPVDELGKAFKDD-----GMGDDATIATIKEIMSEDDRDKDG 306
R L ER E + + D GK + G+ D T K ++SE D++ DG
Sbjct: 432 MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-VDSETWKSVLSEVDKNNDG 490
Query: 307 RISYDEFRSMM 317
+ +DEF+ M+
Sbjct: 491 EVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 177/431 (41%), Gaps = 118/431 (27%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-QFVLLG--- 58
TG + A K ISKR++ + +K+ + REV +++ L PNI+K +ED F L+G
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVY 108
Query: 59 --------------------------------------VMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L S ++A +
Sbjct: 109 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 168
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVPPIW 133
DFGLS E ++G+ YYIAPEVL +Y ++ D+WS VILYILL G PP
Sbjct: 169 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
Query: 134 AETEQGVAQAILKGEINFQ----------------------------------HD----- 154
E + + + KG+ F+ H+
Sbjct: 229 GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288
Query: 155 -------PFPSISSSAIELVRRMLTQ--IQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDN 205
PS+ ++ + + + TQ Q E ++L F +MD +
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNG 348
Query: 206 SGTLTYDELREGL-----------AKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAM 254
G L EL EG + L ++ E +V Q + A D D NG I+Y EF T
Sbjct: 349 DGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 408
Query: 255 TQRHKL---ERFEISLQSHPVDELGKAFKDD-----GMGDDATIATIKEIMSEDDRDKDG 306
R L ER E + + D GK + G+ D T K ++SE D++ DG
Sbjct: 409 MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-VDSETWKSVLSEVDKNNDG 467
Query: 307 RISYDEFRSMM 317
+ +DEF+ M+
Sbjct: 468 EVDFDEFQQML 478
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 175/431 (40%), Gaps = 118/431 (27%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-QFVLLG--- 58
TG + A K ISKR++ + +K+ + REV +++ L PNI K +ED F L+G
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLYEFFEDKGYFYLVGEVY 108
Query: 59 --------------------------------------VMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L S ++A +
Sbjct: 109 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANI 168
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVPPIW 133
DFGLS E ++G+ YYIAPEVL +Y ++ D+WS VILYILL G PP
Sbjct: 169 RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
Query: 134 AETEQGVAQAILKGEINFQ----------------------------------HD----- 154
E + + + KG+ F+ H+
Sbjct: 229 GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTY 288
Query: 155 -------PFPSISSSAIELVRRMLTQ--IQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDN 205
PS+ ++ + + + TQ Q E ++L F + D +
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNG 348
Query: 206 SGTLTYDELREGL-----------AKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAM 254
G L EL EG + L ++ E +V Q + A D D NG I+Y EF T
Sbjct: 349 DGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 408
Query: 255 TQRHKL---ERFEISLQSHPVDELGKAFKDD-----GMGDDATIATIKEIMSEDDRDKDG 306
R L ER E + + D GK + G+ D T K ++SE D++ DG
Sbjct: 409 XDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVS-DVDSETWKSVLSEVDKNNDG 467
Query: 307 RISYDEFRSMM 317
+ +DEF+ +
Sbjct: 468 EVDFDEFQQXL 478
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 148/336 (44%), Gaps = 79/336 (23%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSYGK 111
++HRDL+PEN L S +++A++ DFGLS E +G+ YYIAPEVL + Y +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE 216
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELV---- 167
+ D+WS VIL+ILL G PP +T+Q + + + KG+ F + ++S A +L+
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 168 -----RRMLTQ----------------------------------------IQXXXXXXX 182
RR+ Q Q
Sbjct: 277 QFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336
Query: 183 XXXXXXXEIQKLKEKFTEMDTDNSGTLTYDELREGLAKL-GSTLTEFDVKQY-------M 234
E ++L + F +D + G L EL +G +KL G + FD+ Q +
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 235 QAADIDGNGTIDYIEFRTAMTQRHKL---ERFEISLQSH--------PVDELGKAFKDDG 283
AAD D NG IDY EF T R L ++ E + Q VDEL F G
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---G 453
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+ D T KE++S D + DG + ++EF M+++
Sbjct: 454 L-DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 50/221 (22%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-QFVLLG--- 58
TG + A K ISKR++ + +K+ + REV +++ L PNI+K +ED F L+G
Sbjct: 56 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVY 114
Query: 59 --------------------------------------VMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L S ++A +
Sbjct: 115 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 174
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVPPIW 133
DFGLS E ++G+ YYIAPEVL +Y ++ D+WS VILYILL G PP
Sbjct: 175 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
Query: 134 AETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
E + + + KG+ F+ + +S SA +L+R+MLT +
Sbjct: 235 GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 275
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 170/440 (38%), Gaps = 131/440 (29%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYED----------- 51
TG + A K I K + + EVAV++ L PNI+K +ED
Sbjct: 28 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVY 86
Query: 52 ------DQFVLL-------------------------GVMHRDLRPENFLFTSMDENAVL 80
D+ +L ++HRDL+PEN L S +A++
Sbjct: 87 RGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 146
Query: 81 NANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGKEADIWSAEVILYILLCGVP--- 130
DFGLS E +G+ YYIAPEVL + Y ++ D+WS VILYILLCG P
Sbjct: 147 KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFG 206
Query: 131 --------------------PIWAETEQGVAQAILKGEINFQHDPFPSISSSA------- 163
P W + Q + ++ ++P IS+
Sbjct: 207 GQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV---KLMLTYEPSKRISAEEALNHPWI 263
Query: 164 IELVRRMLTQI----------------------QXXXXXXXXXXXXXXEIQKLKEKFTEM 201
++ + T + Q E ++L + F ++
Sbjct: 264 VKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQL 323
Query: 202 DTDNSGTLTYDELREGLAKL----GSTLTEFD-------VKQYMQAADIDGNGTIDYIEF 250
D + G L EL EG KL G T+++ D V +Q+ D D NG I+Y EF
Sbjct: 324 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEF 383
Query: 251 RTAMTQRHKL---ERFEISLQSHPVD--------ELGKAFKDDGMGDDATIATIKEIMSE 299
T + L ER + Q D ELG+ F + D+ T +++ E
Sbjct: 384 VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDE----TWHQVLQE 439
Query: 300 DDRDKDGRISYDEFRSMMKR 319
D++ DG + ++EF MM++
Sbjct: 440 CDKNNDGEVDFEEFVEMMQK 459
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 150/344 (43%), Gaps = 87/344 (25%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSYG 110
++HRDL+PEN L S +++ + DFGLS ++ +G+ YYIAPEVL +Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQ------------------ 152
++ D+WSA VILYILL G PP + + E + + + G+ F
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 153 ---------------HDPF--------PSIS-----SSAIELVRRMLTQ---IQXXXXXX 181
P+ P+IS SA+ +R+ + Q
Sbjct: 261 LTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYM 320
Query: 182 XXXXXXXXEIQKLKEKFTEMDTDNSGTLTYDELREGLAKL---------------GSTLT 226
E ++L E F ++DT+N G L DEL G + GST+
Sbjct: 321 ASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI- 379
Query: 227 EFDVKQYMQAADIDGNGTIDYIEF------RTAMTQRHKLERFEISLQSHPVDELGKA-- 278
E + M D+DG+G+I+Y EF RT + R ++ER + + D GK
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMER---AFKMFDKDGSGKIST 436
Query: 279 ---FKDDGMGDDAT-IATIKEIMSEDDRDKDGRISYDEFRSMMK 318
FK D + + ++ I+ + D +KDG + ++EF M++
Sbjct: 437 KELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVLWQSYGK 111
++HRDL+PEN L S +A++ DFGLS E +G+ YYIAPEVL + Y +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 201
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS VILYILLCG PP +T+Q + + + KG+ +F + +S A +LV+ ML
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
Query: 172 T 172
T
Sbjct: 262 T 262
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 136/282 (48%), Gaps = 46/282 (16%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNAN--DFGLSVFI-------EEVGSPYYIAPEVLWQS 108
++HRD++PEN L ++N++LN DFGLS F + +G+ YYIAPEVL +
Sbjct: 166 NIVHRDIKPENILLE--NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK 223
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y ++ D+WS VI+YILLCG PP + +Q + + + KG+ F + + +IS A EL++
Sbjct: 224 YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK 283
Query: 169 RMLTQIQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDN-SGTLTYDELREGLAKL------ 221
MLT I+K + D G L+ EG KL
Sbjct: 284 LMLT-YDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAIL 342
Query: 222 --GSTLTEFDVKQYM----QAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDEL 275
GS LT + ++ + + D +G+G +D ++ +E + +
Sbjct: 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLD---------KKELIEGYNVL--------- 384
Query: 276 GKAFKDDGMGDDATI-ATIKEIMSEDDRDKDGRISYDEFRSM 316
+ FK++ +G+ + + I+ E D DK+G I Y EF S+
Sbjct: 385 -RNFKNE-LGELKNVEEEVDNILKEVDFDKNGYIEYSEFISV 424
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEF--------DVKQYMQAADIDG 241
E ++L + F ++D + G L EL EG L + E +V ++ D D
Sbjct: 353 ERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDK 412
Query: 242 NGTIDYIEFRTAMTQRHKL---ERFEISLQSHPVDELGKAFKDDGMGDDATIATIKE--- 295
NG I+Y EF + + L ER + D+ GK K++ + + + +I E
Sbjct: 413 NGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE-LANLFGLTSISEKTW 471
Query: 296 --IMSEDDRDKDGRISYDEFRSMMKR 319
++ E D++KD I +DEF SMM +
Sbjct: 472 NDVLGEADQNKDNMIDFDEFVSMMHK 497
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
LG++HRDL+PEN L+ S+DE++ + +DFGLS V G+P Y+APEVL Q
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y K D WS VI YILLCG PP + E + + + ILK E F + IS SA + +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 169 RMLTQ 173
++ +
Sbjct: 255 HLMEK 259
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVLWQSY 109
L V HRDL+PENFLF + ++ L DFGL+ + +VG+PYY++P+VL Y
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY 201
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D WSA V++Y+LLCG PP A T+ V I +G F + ++S A L+RR
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
Query: 170 MLTQ 173
+LT+
Sbjct: 262 LLTK 265
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVLWQSY 109
L V HRDL+PENFLF + ++ L DFGL+ + +VG+PYY++P+VL Y
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY 184
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D WSA V++Y+LLCG PP A T+ V I +G F + ++S A L+RR
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
Query: 170 MLTQ 173
+LT+
Sbjct: 245 LLTK 248
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
LG++HRDL+PEN L+ S+DE++ + +DFGLS V G+P Y+APEVL Q
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y K D WS VI YILLCG PP + E + + + ILK E F + IS SA + +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 169 RMLTQ 173
++ +
Sbjct: 255 HLMEK 259
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
LG++HRDL+PEN L+ S+DE++ + +DFGLS V G+P Y+APEVL Q
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y K D WS VI YILLCG PP + E + + + ILK E F + IS SA + +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 169 RMLTQ 173
++ +
Sbjct: 255 HLMEK 259
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
LG++HRDL+PEN L+ S+DE++ + +DFGLS V G+P Y+APEVL Q
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y K D WS VI YILLCG PP + E + + + ILK E F + IS SA + +R
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 169 RMLTQ 173
++ +
Sbjct: 255 HLMEK 259
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
+G++HRDL+PEN L+ S DE + + +DFGLS V G+P Y+APEVL Q
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
Y K D WS VI YILLCG PP + E + + + ILK E F + IS SA + +R
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 169 RMLTQ 173
++ +
Sbjct: 259 NLMEK 263
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 88/141 (62%), Gaps = 15/141 (10%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI LKE F +DTDNSGT+T+DEL++GL ++GS L E ++K M AADID +GTIDY E
Sbjct: 8 EIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 67
Query: 250 FRTAMTQRHKLERFE--ISLQSH---------PVDELGKAFKDDGMGDDATIATIKEIMS 298
F A +KLER E +S S+ +DE+ +A KD G+ D IKEI
Sbjct: 68 FIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEI-- 125
Query: 299 EDDRDKDGRISYDEFRSMMKR 319
D+D DG+I Y EF +MM++
Sbjct: 126 --DQDNDGQIDYGEFAAMMRK 144
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSYG 110
++HRDL+PEN L S +++ + DFGLS ++ +G+ YYIAPEVL +Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
++ D+WSA VILYILL G PP + + E + + + G+ F + +IS A +L+R+M
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 171 LT 172
LT
Sbjct: 261 LT 262
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSYG 110
++HRDL+PEN L S +++ + DFGLS ++ +G+ YYIAPEVL +Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
++ D+WSA VILYILL G PP + + E + + + G+ F + +IS A +L+R+M
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 171 LT 172
LT
Sbjct: 261 LT 262
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 55/222 (24%)
Query: 3 TGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
TG ++A K I+ +KL +D++K + RE + + L PNIV+ + ++ F L
Sbjct: 28 TGQEYAAKIINTKKLSARDHQK--LEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDL 84
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENAV 79
G++HRDL+PEN L S + A
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 80 LNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ ++ G+P Y++PEVL + YGK D+W+ VILYILL G P
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + Q I G +F + +++ A +L+ +MLT
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 246
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 55/222 (24%)
Query: 3 TGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
TG ++A K I+ +KL +D++K + RE + + L PNIV+ + ++ F L
Sbjct: 28 TGQEYAAKIINTKKLSARDHQK--LEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDL 84
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENAV 79
G++HRDL+PEN L S + A
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 80 LNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ ++ G+P Y++PEVL + YGK D+W+ VILYILL G P
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + Q I G +F + +++ A +L+ +MLT
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-Q 107
+GV+HRDL+PEN L S + A + DFGL++ ++ G+P Y++PEVL +
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELV 167
+YGK DIW+ VILYILL G PP W E + + Q I G +F + +++ A L+
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241
Query: 168 RRMLT 172
+MLT
Sbjct: 242 NQMLT 246
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ- 107
+GV+HRDL+PEN L S + A + DFGL++ +E G+P Y++PEVL +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELV 167
YGK D+W+ VILYILL G PP W E + + Q I G +F + +++ A +L+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 259
Query: 168 RRMLT 172
+MLT
Sbjct: 260 NKMLT 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 54/222 (24%)
Query: 2 STGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--- 57
+TGL+FA K I+ +KL +D++K + RE + + L PNIV+ + +++ F L
Sbjct: 52 TTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFD 108
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
G++HR+L+PEN L S + A
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ + + G+P Y++PEVL + Y K DIW+ VILYILL G P
Sbjct: 169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + I G ++ + +++ A L+ MLT
Sbjct: 229 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 270
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS------VFIEEVGSPYYIAPEVLWQS-YG 110
G++HRDL+PEN L+ + +EN+ + DFGLS + G+P Y+APEVL Q Y
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D WS VI YILLCG PP + ETE + + I +G F+ + IS SA + + +
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 171 L 171
L
Sbjct: 246 L 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ- 107
+GV+HR+L+PEN L S + A + DFGL++ +E G+P Y++PEVL +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELV 167
YGK D+W+ VILYILL G PP W E + + Q I G +F + +++ A +L+
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 248
Query: 168 RRMLT 172
+MLT
Sbjct: 249 NKMLT 253
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 54/222 (24%)
Query: 2 STGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--- 57
+TGL+FA K I+ +KL +D++K + RE + + L PNIV+ + +++ F L
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFD 85
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
G++HR+L+PEN L S + A
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ + + G+P Y++PEVL + Y K DIW+ VILYILL G P
Sbjct: 146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + I G ++ + +++ A L+ MLT
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 54/222 (24%)
Query: 2 STGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--- 57
+TGL+FA K I+ +KL +D++K + RE + + L PNIV+ + +++ F L
Sbjct: 28 TTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFD 84
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
G++HR+L+PEN L S + A
Sbjct: 85 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ + + G+P Y++PEVL + Y K DIW+ VILYILL G P
Sbjct: 145 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 204
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + I G ++ + +++ A L+ MLT
Sbjct: 205 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 54/222 (24%)
Query: 2 STGLQFACKSISKRKL-VKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--- 57
+TGL+FA K I+ +KL +D++K + RE + + L PNIV+ + +++ F L
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFD 85
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
G++HR+L+PEN L S + A
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVP 130
+ DFGL++ + + G+P Y++PEVL + Y K DIW+ VILYILL G P
Sbjct: 146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
P W E + + I G ++ + +++ A L+ MLT
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS------VFIEEVGSPYYIAPEVLW-QSYGK 111
+ HRD++PEN L+TS +++AVL DFG + +PYY+APEVL + Y K
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQ----GVAQAILKGEINFQHDPFPSISSSAIELV 167
D+WS VI+YILLCG PP ++ T Q G+ + I G+ F + + +S A +L+
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 249
Query: 168 RRML 171
R +L
Sbjct: 250 RLLL 253
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS------VFIEEVGSPYYIAPEVLW-QSYGK 111
+ HRD++PEN L+TS +++AVL DFG + +PYY+APEVL + Y K
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQ----GVAQAILKGEINFQHDPFPSISSSAIELV 167
D+WS VI+YILLCG PP ++ T Q G+ + I G+ F + + +S A +L+
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 268
Query: 168 RRML 171
R +L
Sbjct: 269 RLLL 272
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SY 109
++HRDL+PEN L S + A + DFGL++ ++ G+P Y++PEVL + Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
GK DIW+ VILYILL G PP W E + + Q I G +F + +++ A L+ +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 170 MLT 172
MLT
Sbjct: 271 MLT 273
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 64/231 (27%)
Query: 2 STGLQFACK--SISKRKLVKDY---EKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVL 56
+TG +FA K ++ +L + ++ RRE +++ ++G P+I+ +YE F+
Sbjct: 117 ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176
Query: 57 L------------------------------------------GVMHRDLRPENFLFTSM 74
L ++HRDL+PEN L +
Sbjct: 177 LVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL---L 233
Query: 75 DENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQS-------YGKEADIWSAEV 120
D+N + +DFG S +E G+P Y+APE+L S YGKE D+W+ V
Sbjct: 234 DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
Query: 121 ILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
IL+ LL G PP W + + + I++G+ F + SS+ +L+ R+L
Sbjct: 294 ILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLL 344
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 58/229 (25%)
Query: 1 NSTGLQFACKSISKRK------LVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQF 54
+T + + CK +K L K +K VR E+ V+ LS PNI+K K +E
Sbjct: 64 GATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE 122
Query: 55 VLL------------------------------------------GVMHRDLRPENFLFT 72
+ L G++HRDL+PEN L+
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYA 182
Query: 73 SMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYI 124
+ +A L DFGLS +E G+P Y APE+L +YG E D+WS +I YI
Sbjct: 183 TPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYI 242
Query: 125 LLCGVPPIWAET-EQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
LLCG P + E +Q + + IL E F + +S +A +LVR+++
Sbjct: 243 LLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIV 291
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + E +PYY+APEVL +
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEK 193
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 165 ELVRRML 171
L+R +L
Sbjct: 254 MLIRNLL 260
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 299
Query: 165 ELVRRML 171
L+R +L
Sbjct: 300 MLIRNLL 306
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 195
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 255
Query: 165 ELVRRML 171
L+R +L
Sbjct: 256 MLIRNLL 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 186 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 245
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 305
Query: 165 ELVRRML 171
L+R +L
Sbjct: 306 MLIRNLL 312
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 10/122 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVL-WQSY 109
++HRD++PEN L S + +A + DFG+++ + E VG+P+++APEV+ + Y
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
GK D+W VIL+ILL G P + T++ + + I+KG+ + IS SA +LVRR
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 170 ML 171
ML
Sbjct: 270 ML 271
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 195
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 255
Query: 165 ELVRRML 171
L+R +L
Sbjct: 256 MLIRNLL 262
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 140 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 199
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 200 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 259
Query: 165 ELVRRML 171
L+R +L
Sbjct: 260 MLIRNLL 266
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 141 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 200
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 201 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 260
Query: 165 ELVRRML 171
L+R +L
Sbjct: 261 MLIRNLL 267
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 135 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 194
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 195 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 254
Query: 165 ELVRRML 171
L+R +L
Sbjct: 255 MLIRNLL 261
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 193
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 165 ELVRRML 171
L+R +L
Sbjct: 254 MLIRNLL 260
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 142 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 201
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 202 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 261
Query: 165 ELVRRML 171
L+R +L
Sbjct: 262 MLIRNLL 268
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 209
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D+WS VI+YILLCG PP ++ G+ I G+ F + + +S
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 269
Query: 165 ELVRRML 171
L+R +L
Sbjct: 270 MLIRNLL 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 59/201 (29%)
Query: 28 REVAVMQYLSGQPNIVKFKAAYEDDQFVLL------------------------------ 57
+EV +++ +SG PNI++ K YE + F L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 58 ------------GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI-------EEVGSPY 98
++HRDL+PEN L +D++ + DFG S + E G+P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 99 YIAPEVLWQS-------YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINF 151
Y+APE++ S YGKE D+WS VI+Y LL G PP W + + + I+ G F
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 248
Query: 152 QHDPFPSISSSAIELVRRMLT 172
+ S + +LV R L
Sbjct: 249 GSPEWDDYSDTVKDLVSRFLV 269
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 59/201 (29%)
Query: 28 REVAVMQYLSGQPNIVKFKAAYEDDQFVLL------------------------------ 57
+EV +++ +SG PNI++ K YE + F L
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 58 ------------GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI-------EEVGSPY 98
++HRDL+PEN L +D++ + DFG S + E G+P
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 175
Query: 99 YIAPEVLWQS-------YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINF 151
Y+APE++ S YGKE D+WS VI+Y LL G PP W + + + I+ G F
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 235
Query: 152 QHDPFPSISSSAIELVRRMLT 172
+ S + +LV R L
Sbjct: 236 GSPEWDDYSDTVKDLVSRFLV 256
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 59/201 (29%)
Query: 28 REVAVMQYLSGQPNIVKFKAAYEDDQFVLL------------------------------ 57
+EV +++ +SG PNI++ K YE + F L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 58 ------------GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPY 98
++HRDL+PEN L +D++ + DFG S ++ G+P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS 188
Query: 99 YIAPEVLWQS-------YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINF 151
Y+APE++ S YGKE D+WS VI+Y LL G PP W + + + I+ G F
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 248
Query: 152 QHDPFPSISSSAIELVRRMLT 172
+ S + +LV R L
Sbjct: 249 GSPEWDDYSDTVKDLVSRFLV 269
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QS 108
+ + HRD++PEN L+TS NA+L DFG + +PYY+APEVL +
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAI 164
Y K D WS VI YILLCG PP ++ G I G+ F + + +S
Sbjct: 240 YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVK 299
Query: 165 ELVRRML 171
L+R +L
Sbjct: 300 XLIRNLL 306
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 254 LVKKLLV 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 254 LVKKLLV 260
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 254 LVKKLLV 260
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 192
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 193 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 252
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 253 LVKKLLV 259
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 199
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 200 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 259
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 260 LVKKLLV 266
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 332
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 333 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 392
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 393 LVKKLLV 399
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ--- 107
G++HRDL+PEN L +S +E+ ++ DFG S + E G+P Y+APEVL
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 318
Query: 108 -SYGKEADIWSAEVILYILLCGVPPIWAE-TEQGVAQAILKGEINFQHDPFPSISSSAIE 165
Y + D WS VIL+I L G PP T+ + I G+ NF + + +S A++
Sbjct: 319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 378
Query: 166 LVRRMLT 172
LV+++L
Sbjct: 379 LVKKLLV 385
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 15/143 (10%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI LKE F +D D SG +T++EL+ GL ++G+ L E ++ QAAD+D +GTIDY E
Sbjct: 25 EIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKE 84
Query: 250 FRTAMTQRHKLERFEISLQSHPV-----------DELGKAFKDDGMGDDATIATIKEIMS 298
F A +K+ER + + DEL +A ++ G+ D I+E+
Sbjct: 85 FIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVED----VRIEELXR 140
Query: 299 EDDRDKDGRISYDEFRSMMKRGT 321
+ D+D DGRI Y+EF + ++G+
Sbjct: 141 DVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVL-WQSY 109
++HRD++P L S + +A + FG+++ + E VG+P+++APEV+ + Y
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 212
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
GK D+W VIL+ILL G P + T++ + + I+KG+ + IS SA +LVRR
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 170 ML 171
ML
Sbjct: 272 ML 273
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVL-WQSY 109
++HRD++P L S + +A + FG+++ + E VG+P+++APEV+ + Y
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
GK D+W VIL+ILL G P + T++ + + I+KG+ + IS SA +LVRR
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 170 ML 171
ML
Sbjct: 270 ML 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 GELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 91
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 149
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 210 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 92
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 150
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGLQ+A K I KR+ + ++D+ REV++++ + PN++ YE+ V+L
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILI 91
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D
Sbjct: 92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML--LDR 149
Query: 77 NAV---LNANDFGLSV-------FIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ F G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q + F+ + F + S+ A + +RR+L +
Sbjct: 210 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 64/224 (28%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
FA K ISKR + + ++E+ ++ G PNIVK + D L
Sbjct: 39 FAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 58 ---------------------------------GVMHRDLRPENFLFTSMDENAVLNAND 84
GV+HRDL+PEN LFT ++N + D
Sbjct: 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIID 152
Query: 85 FGLSVFIEEVGSP--------YYIAPEVLWQS-YGKEADIWSAEVILYILLCGVPP---- 131
FG + P +Y APE+L Q+ Y + D+WS VILY +L G P
Sbjct: 153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212
Query: 132 ---IWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+ + + + I KG+ +F+ + + ++S A +L++ +LT
Sbjct: 213 DRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT 256
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 55/225 (24%)
Query: 3 TGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL-- 57
TG ++A K I KR+L + ++++ REV +++ + PNI+ +E+ V+L
Sbjct: 50 TGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTDVVLIL 108
Query: 58 ----------------------------------------GVMHRDLRPENFLFTSMD-E 76
+ H DL+PEN + +
Sbjct: 109 ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 168
Query: 77 NAVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCG 128
N + DFG++ IE G+P ++APE++ ++ G EAD+WS VI YILL G
Sbjct: 169 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
P ET+Q I +F + F + S A + +RR+L +
Sbjct: 229 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVK 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 55/225 (24%)
Query: 3 TGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL-- 57
TG ++A K I KR+L + ++++ REV +++ + PNI+ +E+ V+L
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTDVVLIL 87
Query: 58 ----------------------------------------GVMHRDLRPENFLFTSMD-E 76
+ H DL+PEN + +
Sbjct: 88 ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 147
Query: 77 NAVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCG 128
N + DFG++ IE G+P ++APE++ ++ G EAD+WS VI YILL G
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
P ET+Q I +F + F + S A + +RR+L +
Sbjct: 208 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVK 252
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 55/225 (24%)
Query: 3 TGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL-- 57
TG ++A K I KR+L + ++++ REV +++ + PNI+ +E+ V+L
Sbjct: 36 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTDVVLIL 94
Query: 58 ----------------------------------------GVMHRDLRPENFLFTSMD-E 76
+ H DL+PEN + +
Sbjct: 95 ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 154
Query: 77 NAVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCG 128
N + DFG++ IE G+P ++APE++ ++ G EAD+WS VI YILL G
Sbjct: 155 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
P ET+Q I +F + F + S A + +RR+L +
Sbjct: 215 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVK 259
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSV------------FIEEVGSPYYIAPEVL 105
G+ HRD++PENFLF S +++ + DFGLS + G+PY++APEVL
Sbjct: 188 GICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 106 W---QSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
+SYG + D WSA V+L++LL G P + +L ++ F++ + +S
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
Query: 163 AIELVRRMLTQ 173
A +L+ +L +
Sbjct: 307 ARDLLSNLLNR 317
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 1 NSTGLQFACKSISKRKLVKDYEKD--DVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL 57
N T A K ++K K+ + KD ++ EV +M+ L PNI + YED+Q++ L
Sbjct: 48 NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICL 105
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLVKDYE---KDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ ++++ REV++++ + PNI+ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 N---AVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI LKE F +DTDNSGT+T+DEL++GL ++GS L E ++K M AADID +GTIDY E
Sbjct: 21 EIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80
Query: 250 FRTAMTQ 256
F A
Sbjct: 81 FIAATVH 87
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYYIAPEVLWQSYGKEADIW 116
+ + HRD++PEN L+TS NA+L DFG A E + Y K D+W
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------AKETTGEKYDKSCDMW 182
Query: 117 SAEVILYILLCGVPPIWAE----TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
S VI+YILLCG PP ++ G+ I G+ F + + +S L+R +L
Sbjct: 183 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
FA K + K L+K ++K+ + E+A+ + L P++V F +EDD FV +
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 58 ---------------------------------GVMHRDLRPEN-FLFTSMDENAVLNAN 83
V+HRDL+ N FL MD +
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD----VKIG 184
Query: 84 DFGLSVFIE--------EVGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ IE G+P YIAPEVL + + E DIWS ILY LL G PP
Sbjct: 185 DFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+RRML
Sbjct: 245 SCLKETYIRIKKNEYSVPR----HINPVASALIRRML 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
FA K + K L+K ++K+ + E+A+ + L P++V F +EDD FV +
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 58 ---------------------------------GVMHRDLRPEN-FLFTSMDENAVLNAN 83
V+HRDL+ N FL MD +
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD----VKIG 184
Query: 84 DFGLSVFIE--------EVGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ IE G+P YIAPEVL + + E DIWS ILY LL G PP
Sbjct: 185 DFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+RRML
Sbjct: 245 SCLKETYIRIKKNEYSVPR----HINPVASALIRRML 277
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
FA K + K L+K ++K+ + E+A+ + L P++V F +EDD FV +
Sbjct: 54 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 112
Query: 58 ---------------------------------GVMHRDLRPEN-FLFTSMDENAVLNAN 83
V+HRDL+ N FL MD +
Sbjct: 113 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD----VKIG 168
Query: 84 DFGLSVFIE--------EVGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ IE G+P YIAPEVL + + E DIWS ILY LL G PP
Sbjct: 169 DFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+RRML
Sbjct: 229 SCLKETYIRIKKNEYSVPR----HINPVASALIRRML 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
FA K + K L+K ++K+ + E+A+ + L P++V F +EDD FV +
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 58 ---------------------------------GVMHRDLRPEN-FLFTSMDENAVLNAN 83
V+HRDL+ N FL MD +
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD----VKIG 184
Query: 84 DFGLSVFIE--------EVGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ IE G+P YIAPEVL + + E DIWS ILY LL G PP
Sbjct: 185 DFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+RRML
Sbjct: 245 SCLKETYIRIKKNEYSVPR----HINPVASALIRRML 277
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ + ++++ REV++++ + N++ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 N---AVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ + ++++ REV++++ + N++ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 NAVL---NANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ + ++++ REV++++ + N++ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 N---AVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSYGK 111
V+H+DL+PEN LF ++ + DFGL+ + G+ Y+APEV +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF 204
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ DIWSA V++Y LL G P + + V Q E N+ + P ++ A++L+++ML
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQML 263
Query: 172 TQ 173
T+
Sbjct: 264 TK 265
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ + ++++ REV++++ + N++ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 N---AVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 59/228 (25%)
Query: 2 STGLQFACKSISKRKLV---KDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL- 57
STGL++A K I KR+ + ++++ REV++++ + N++ YE+ V+L
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLI 93
Query: 58 -----------------------------------------GVMHRDLRPENFLFTSMDE 76
+ H DL+PEN + +D+
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML--LDK 151
Query: 77 N---AVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYIL 125
N + DFGL+ IE+ G+P ++APE++ ++ G EAD+WS VI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 126 LCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
L G P +T+Q I +F + F S A + +R++L +
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 53 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 111
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 168
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 268
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 53 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 111
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 168
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 268
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 53 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 111
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 168
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 268
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 60 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFCFQDDEKLYFGLSY 118
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 119 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 175
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 236 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 275
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 52 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 110
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 111 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 167
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 228 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 267
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 37 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 95
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 96 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 152
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 213 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 252
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 52 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 110
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 111 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 167
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 228 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 267
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 53 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 111
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 168
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 268
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 30 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 88
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 89 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 145
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 146 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 206 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 245
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 56 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 114
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 115 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 171
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 172 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 232 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 271
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 56 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 114
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 115 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 171
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 172 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 232 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 33 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 91
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 92 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 148
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 149 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 209 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 32 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 90
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 91 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 147
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 148 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 208 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 247
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 31 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 89
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 90 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 146
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 147 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 207 LPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLV 246
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 58 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 116
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 117 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 173
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 174 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + Q I+K E +F FP A +LV ++L
Sbjct: 234 LPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDLVEKLLV 273
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKD--------DGMGDDATIATIKEIMSEDD 301
F T M ++ K EI D+ G F +G+ T + E++ E D
Sbjct: 68 FLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 302 RDKDGRISYDEFRSMM 317
D DG+++Y+EF +MM
Sbjct: 128 IDGDGQVNYEEFVTMM 143
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 81 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 252 TAMTQR 257
T MT +
Sbjct: 141 TMMTSK 146
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 61/224 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+T ++A K + KR ++K+ + V RE VM L P VK ++DD+ + G
Sbjct: 55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSY 113
Query: 59 ---------------------------------------VMHRDLRPENFLFTSMDENAV 79
++HRDL+PEN L ++E+
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL---LNEDMH 170
Query: 80 LNANDFGLSVFIEE----------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+ DFG + + VG+ Y++PE+L + S K +D+W+ I+Y L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 129 VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
+PP A E + I+K E +F FP A +LV ++L
Sbjct: 231 LPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLV 270
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK E + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYA 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN + +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK E + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYA 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN + +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFGL+ ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 KVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG FA K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEYSFKDNSNLYMVMEYV 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG FA K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEYSFKDNSNLYMVMEYV 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG FA K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEYSFKDNSNLYMVMEYV 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +DE + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 147 LDLIYRDLKPENLL---IDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 258
Query: 171 LTQI 174
L Q+
Sbjct: 259 LLQV 262
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV-----GSPYYIAPEVL-WQSYGKE 112
+++RDL+PEN L +D+N + DFG + ++ +V G+P YIAPEV+ + Y K
Sbjct: 127 IIYRDLKPENIL---LDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 113 ADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
D WS +++Y +L G P + + IL E+ F P + +L+ R++T
Sbjct: 184 IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLIT 239
Query: 173 Q 173
+
Sbjct: 240 R 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 53/224 (23%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
STG ++A K + KR+ +D + ++ E+AV++ P ++ YE+ ++L
Sbjct: 52 STGQEYAAKFLKKRRRGQDC-RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEY 110
Query: 58 ----------------------------------------GVMHRDLRPENFLFTSMDEN 77
++H DL+P+N L +S+
Sbjct: 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPL 170
Query: 78 AVLNANDFGLSVFI-------EEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGV 129
+ DFG+S I E +G+P Y+APE+L + D+W+ +I Y+LL
Sbjct: 171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT 230
Query: 130 PPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
P E Q I + +++ + F S+S A + ++ +L +
Sbjct: 231 SPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK 274
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSV---------FIEEVGSPYYIAPEVLW-Q 107
G HRDL+PEN LF DE L DFGL GS Y APE++ +
Sbjct: 128 GYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 108 SY-GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
SY G EAD+WS ++LY+L+CG P + + + I++G ++D +S S+I L
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG----KYDVPKWLSPSSILL 240
Query: 167 VRRML 171
+++ML
Sbjct: 241 LQQML 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 155 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 211
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 266
Query: 171 LTQI 174
L Q+
Sbjct: 267 LLQV 270
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 32/173 (18%)
Query: 26 VRREVAVMQYLSG--------------QPNIVKFKAAYEDDQFVL--LGVMHRDLRPENF 69
V R VM+Y++G +P V + A F L G+++RDL+ +N
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNV 151
Query: 70 LFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEV 120
+ +D + DFG+ E G+P YIAPE++ +Q YGK D W+ V
Sbjct: 152 M---LDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGV 208
Query: 121 ILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
+LY +L G PP E E + Q+I++ +++ S+S A+ + + ++T+
Sbjct: 209 LLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTK 257
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 181 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 292
Query: 171 LTQI 174
L Q+
Sbjct: 293 LLQV 296
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 181 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYN 237
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 292
Query: 171 LTQI 174
L Q+
Sbjct: 293 LLQV 296
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 124
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 181
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 242 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 124
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 181
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 242 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 276
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 124
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 181
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 182 QVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 242 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 276
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 123
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 180
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 241 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 275
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 116
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 117 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 173
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 174 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 234 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 268
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 116
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 173
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 174 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 234 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 268
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 181 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 292
Query: 171 LTQI 174
L Q+
Sbjct: 293 LLQV 296
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 57/220 (25%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD---------- 52
TG +A K + K+K+VK + + E ++Q ++ P +VK + +++D+
Sbjct: 51 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYMVMEYV 109
Query: 53 -------------------------QFVL-------LGVMHRDLRPENFLFTSMDENAVL 80
Q VL L +++RDL+PEN L +D+ +
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYI 166
Query: 81 NANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKEADIWSAEVILYILLCGVPPIWA 134
DFG + ++ G+P Y+APE+ L + Y K D W+ V++Y + G PP +A
Sbjct: 167 QVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226
Query: 135 ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
+ + + I+ G++ FPS SS ++ + R L Q+
Sbjct: 227 DQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRNLLQV 261
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 309 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARKMKYTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 332 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
+G++HRD++P+N L +D++ L DFG + ++E VG+P YI+PEVL
Sbjct: 193 MGLIHRDVKPDNML---LDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 108 S-----YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL--KGEINFQHDPFPSIS 160
YG+E D WS V L+ +L G P +A++ G I+ K + F D IS
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEIS 307
Query: 161 SSAIELVRRMLT 172
A L+ LT
Sbjct: 308 KHAKNLICAFLT 319
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 58/220 (26%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVK-FKAAYEDDQFVLL--- 57
+TG + A K I+K+ L K + + RE++ ++ L P+I+K + D+ +++
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEY 95
Query: 58 -------------------------------------GVMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L +DE+ +
Sbjct: 96 AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNV 152
Query: 81 NANDFGLSVFIEE-------VGSPYYIAPEVLWQSY--GKEADIWSAEVILYILLCGVPP 131
DFGLS + + GSP Y APEV+ G E D+WS VILY++LC P
Sbjct: 153 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
Query: 132 IWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
E+ + + I G +S A L++RML
Sbjct: 213 FDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 248
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 58/220 (26%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVK-FKAAYEDDQFVLL--- 57
+TG + A K I+K+ L K + + RE++ ++ L P+I+K + D+ +++
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEY 94
Query: 58 -------------------------------------GVMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L +DE+ +
Sbjct: 95 AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNV 151
Query: 81 NANDFGLSVFIEE-------VGSPYYIAPEVLWQSY--GKEADIWSAEVILYILLCGVPP 131
DFGLS + + GSP Y APEV+ G E D+WS VILY++LC P
Sbjct: 152 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
Query: 132 IWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
E+ + + I G +S A L++RML
Sbjct: 212 FDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 247
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 275 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E ++ E + F DG +G+ T +
Sbjct: 335 FLTMMARKMKDTDSEEEIR-----EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 389
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMM 412
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 350 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 252 TAMTQR 257
MT +
Sbjct: 410 QMMTAK 415
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 30/98 (30%)
Query: 225 LTEFDVKQYMQAA---DIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKD 281
LTE + ++ +A D DG+GTI E T M
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS------------------------- 305
Query: 282 DGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+G + T A ++++++E D D +G I + EF +MM R
Sbjct: 306 --LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 341
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 275 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E ++ E + F DG +G+ T +
Sbjct: 335 FLTMMARKMKDTDSEEEIR-----EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 389
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMM 412
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 350 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 252 TAMTQR 257
MT +
Sbjct: 410 QMMTAK 415
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 30/98 (30%)
Query: 225 LTEFDVKQYMQAA---DIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKD 281
LTE + ++ +A D DG+GTI E T M
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS------------------------- 305
Query: 282 DGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+G + T A ++++++E D D +G I + EF +MM R
Sbjct: 306 --LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 341
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 58/220 (26%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVK-FKAAYEDDQFVLL--- 57
+TG + A K I+K+ L K + + RE++ ++ L P+I+K + D+ +++
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEY 89
Query: 58 -------------------------------------GVMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L +DE+ +
Sbjct: 90 AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNV 146
Query: 81 NANDFGLSVFIEE-------VGSPYYIAPEVLWQSY--GKEADIWSAEVILYILLCGVPP 131
DFGLS + + GSP Y APEV+ G E D+WS VILY++LC P
Sbjct: 147 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
Query: 132 IWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
E+ + + I G +S A L++RML
Sbjct: 207 FDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 242
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 161 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 272
Query: 171 LTQI 174
L Q+
Sbjct: 273 LLQV 276
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 58/220 (26%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVK-FKAAYEDDQFVLL--- 57
+TG + A K I+K+ L K + + RE++ ++ L P+I+K + D+ +++
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEY 85
Query: 58 -------------------------------------GVMHRDLRPENFLFTSMDENAVL 80
++HRDL+PEN L +DE+ +
Sbjct: 86 AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNV 142
Query: 81 NANDFGLSVFIEE-------VGSPYYIAPEVLWQSY--GKEADIWSAEVILYILLCGVPP 131
DFGLS + + GSP Y APEV+ G E D+WS VILY++LC P
Sbjct: 143 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
Query: 132 IWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
E+ + + I G +S A L++RML
Sbjct: 203 FDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLM---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
+G +HRD++P+N L +D++ L DFG + + + VG+P YI+PEVL
Sbjct: 192 MGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 108 S-----YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL--KGEINFQHDPFPSIS 160
YG+E D WS V LY +L G P +A++ G I+ K + F D IS
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDIS 306
Query: 161 SSAIELVRRMLT 172
A L+ LT
Sbjct: 307 KEAKNLICAFLT 318
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 272 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 331
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E ++ E + F DG +G+ T +
Sbjct: 332 FLTMMARKMKDTDSEEEIR-----EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 386
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 387 EMIREADIDGDGQVNYEEFVQMM 409
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 347 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 406
Query: 252 TAMT 255
MT
Sbjct: 407 QMMT 410
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 295 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 338
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
+G +HRD++P+N L +D++ L DFG + + + VG+P YI+PEVL
Sbjct: 192 MGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 108 S-----YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL--KGEINFQHDPFPSIS 160
YG+E D WS V LY +L G P +A++ G I+ K + F D IS
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDIS 306
Query: 161 SSAIELVRRMLT 172
A L+ LT
Sbjct: 307 KEAKNLICAFLT 318
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
+G +HRD++P+N L +D++ L DFG + + + VG+P YI+PEVL
Sbjct: 187 MGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 108 S-----YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL--KGEINFQHDPFPSIS 160
YG+E D WS V LY +L G P +A++ G I+ K + F D IS
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDIS 301
Query: 161 SSAIELVRRMLT 172
A L+ LT
Sbjct: 302 KEAKNLICAFLT 313
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 310 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 369
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 370 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 424
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 425 EMIREADIDGDGQVNYEEFVQMM 447
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 385 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 444
Query: 252 TAMTQR 257
MT +
Sbjct: 445 QMMTAK 450
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 333 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 376
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 309 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 332 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 309 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 332 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFI--------EEVGSPYYIAPEVLWQ-SY 109
V+HRDL+P N +D + DFGL+ + E VG+PYY++PE + + SY
Sbjct: 137 VLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
+++DIWS +LY L +PP A +++ +A I +G+ F+ P+ S E++ R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITR 250
Query: 170 MLT 172
ML
Sbjct: 251 MLN 253
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 62/225 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+T +++A K I K K D E+ ++ PNI+ K Y+D + V L
Sbjct: 50 ATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTEL 102
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENA- 78
GV+HRDL+P N L+ N
Sbjct: 103 MRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPE 162
Query: 79 VLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGV 129
L DFG + + + + ++APEVL Q Y + DIWS ++LY +L G
Sbjct: 163 CLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 130 PPIW---AETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P ++T + + I G+ + ++S +A +LV +ML
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 25/135 (18%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
L +HRD++P+N L MD N + DFG + + E VG+P YI+PE+L
Sbjct: 194 LHYVHRDIKPDNIL---MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 108 ------SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS--- 158
YG E D WS V +Y +L G P +AE+ I+ + FQ FP+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVT 307
Query: 159 -ISSSAIELVRRMLT 172
+S +A +L+RR++
Sbjct: 308 DVSENAKDLIRRLIC 322
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVLW-QSYG 110
L +++RDL+PEN + +D+ + DFG + ++ G+P Y+APE++ + Y
Sbjct: 160 LDLIYRDLKPENLI---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 4 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K S + E + F DG +G+ T +
Sbjct: 64 FLTMMARKMK------DTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 117
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E + D DG+++Y+EF MM
Sbjct: 118 EMIREANIDGDGQVNYEEFVQMM 140
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ A+IDG+G ++Y EF
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 252 TAMT 255
MT
Sbjct: 138 QMMT 141
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 27 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 70
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +MM
Sbjct: 124 EMIRESDIDGDGQVNYEEFVTMM 146
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ +DIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
T MT +
Sbjct: 144 TMMTSK 149
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 62/225 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+T +++A K I D K D E+ ++ PNI+ K Y+D + V L
Sbjct: 50 ATNMEYAVKVI-------DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTEL 102
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENA- 78
GV+HRDL+P N L+ N
Sbjct: 103 MRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPE 162
Query: 79 VLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGV 129
L DFG + + + + ++APEVL Q Y + DIWS ++LY +L G
Sbjct: 163 CLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 130 PPIW---AETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P ++T + + I G+ + ++S +A +LV +ML
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 45 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 160
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 161 FGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 221 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 252
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P Y+AP + L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SY 109
V+HRDL+P N +D + DFGL+ + VG+PYY++PE + + SY
Sbjct: 137 VLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
+++DIWS +LY L +PP A +++ +A I +G+ F+ P+ S E++ R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITR 250
Query: 170 MLT 172
ML
Sbjct: 251 MLN 253
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 49 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 107
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 108 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 164
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 165 FGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 225 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 256
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SY 109
V+HRDL+P N +D + DFGL+ + VG+PYY++PE + + SY
Sbjct: 137 VLHRDLKPANVF---LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
+++DIWS +LY L +PP A +++ +A I +G+ F+ P+ S E++ R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITR 250
Query: 170 MLT 172
ML
Sbjct: 251 MLN 253
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 308 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E ++ E + F DG +G+ T +
Sbjct: 368 FLTMMARKMKYTDSEEEIR-----EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 252 TAMTQR 257
MT +
Sbjct: 443 QMMTAK 448
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 331 ELGTVMRS--LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 45 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 160
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 161 FGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 221 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 252
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 69 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 184
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 185 FGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 245 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 276
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 308 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 368 FLTMMARKMKYTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 252 TAMTQR 257
MT +
Sbjct: 443 QMMTAK 448
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 331 ELGTVMRS--LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 67 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 125
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 126 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 182
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 183 FGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 243 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 274
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 16/84 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLSVFIEE-------VGSPYYIAPEVLWQSY 109
V+HRDL+PEN L +A +NA DFGLS + + GSP Y APEV+
Sbjct: 137 VVHRDLKPENVLL-----DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 110 --GKEADIWSAEVILYILLCGVPP 131
G E DIWS+ VILY LLCG P
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 59/216 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFV----------- 55
FA K + K L+K ++++ + E+++ + L+ Q ++V F +ED+ FV
Sbjct: 43 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFHGFFEDNDFVFVVLELCRRRS 101
Query: 56 -----------------------LLG--------VMHRDLRPENFLFTSMDENAVLNAND 84
+LG V+HRDL+ N ++E+ + D
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF---LNEDLEVKIGD 158
Query: 85 FGLSVFIEE--------VGSPYYIAPEVLWQ-SYGKEADIWSAEVILYILLCGVPPIWAE 135
FGL+ +E G+P YIAPEVL + + E D+WS I+Y LL G PP
Sbjct: 159 FGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
Query: 136 TEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ I K E + I+ A L+++ML
Sbjct: 219 CLKETYLRIKKNEYSIPKH----INPVAASLIQKML 250
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMM 146
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
T MT +
Sbjct: 144 TMMTSK 149
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 309 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARKMKYTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 332 ELGTVMRS--LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 375
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMM 145
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
T MT +
Sbjct: 143 TMMTAK 148
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMM 146
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
T MT +
Sbjct: 144 TMMTTK 149
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMM 145
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
T MT +
Sbjct: 143 TMMTSK 148
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 16/84 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLSVFIEE-------VGSPYYIAPEVLWQSY 109
V+HRDL+PEN L +A +NA DFGLS + + GSP Y APEV+
Sbjct: 132 VVHRDLKPENVLL-----DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186
Query: 110 --GKEADIWSAEVILYILLCGVPP 131
G E DIWS VILY LLCG P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 16/84 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLSVFIEE-------VGSPYYIAPEVLWQSY 109
V+HRDL+PEN L +A +NA DFGLS + + GSP Y APEV+
Sbjct: 132 VVHRDLKPENVLL-----DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRL 186
Query: 110 --GKEADIWSAEVILYILLCGVPP 131
G E DIWS VILY LLCG P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 62/225 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+T ++FA K I K K D E+ ++ PNI+ K Y+D ++V +
Sbjct: 45 ATNMEFAVKIIDK-------SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENA- 78
GV+HRDL+P N L+ N
Sbjct: 98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE 157
Query: 79 VLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGV 129
+ DFG + + + + ++APEVL Q Y DIWS V+LY +L G
Sbjct: 158 SIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY 217
Query: 130 PPIWA---ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P +T + + I G+ + + S+S +A +LV +ML
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKML 262
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 36/152 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE---------------EVGSPYYIAP 102
G+ HRDL+PEN L ++ + + DFGL I+ GS Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 103 EVL------WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVA------ 141
EV+ Y K D+WS VILYILL G PP W E A
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250
Query: 142 QAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
++I +G+ F + IS +A +L+ ++L +
Sbjct: 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVR 282
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 12 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 71
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 72 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 126
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 127 EMIREADIDGDGQVNYEEFVQMM 149
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 87 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 146
Query: 252 TAMTQR 257
MT +
Sbjct: 147 QMMTAK 152
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 35 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 78
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 6 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 66 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 81 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 252 TAMTQR 257
MT +
Sbjct: 141 QMMTAK 146
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 29 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 6 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 66 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 81 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 252 TAMT 255
MT
Sbjct: 141 QMMT 144
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 29 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
MT +
Sbjct: 143 QMMTAK 148
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 5 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 65 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 119
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 120 EMIREADIDGDGQVNYEEFVQMM 142
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 80 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 139
Query: 252 TAMT 255
MT
Sbjct: 140 QMMT 143
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 28 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 71
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 10 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 69
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 70 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 124
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 125 EMIREADIDGDGQVNYEEFVQMM 147
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 85 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 144
Query: 252 TAMTQR 257
MT +
Sbjct: 145 QMMTAK 150
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 33 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 76
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 6 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 66 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 81 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 252 TAMTQR 257
MT +
Sbjct: 141 QMMTAK 146
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 29 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMT 255
MT
Sbjct: 143 QMMT 146
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 14 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 73
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 74 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 128
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 129 EMIREADIDGDGQVNYEEFVQMM 151
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 89 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 148
Query: 252 TAMTQR 257
MT +
Sbjct: 149 QMMTAK 154
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 37 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 80
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 309 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M + K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARWMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 332 ELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
MT +
Sbjct: 143 QMMTAK 148
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 4 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 64 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 118
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 119 EMIREADIDGDGQVNYEEFVQMM 141
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 79 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 138
Query: 252 TAMTQR 257
MT +
Sbjct: 139 QMMTAK 144
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 27 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 7 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 66
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 67 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 121
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 122 EMIREADIDGDGQVNYEEFVQMM 144
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 82 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 141
Query: 252 TAMT 255
MT
Sbjct: 142 QMMT 145
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 30 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 73
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYG 110
L +++RDL+PEN L +D+ + DFG + ++ G+P +APE+ L + Y
Sbjct: 160 LDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYN 216
Query: 111 KEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRM 170
K D W+ V++Y + G PP +A+ + + I+ G++ FPS SS ++ + R
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-----FPSHFSSDLKDLLRN 271
Query: 171 LTQI 174
L Q+
Sbjct: 272 LLQV 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 61 HRDLRPENFLFTSMDENAVLNANDFGLSV-------FIEEVGSPYYIAPEVLWQSYGKEA 113
H D+RPEN ++ + ++ + +FG + F +P Y APEV A
Sbjct: 125 HFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 114 -DIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLT 172
D+WS ++Y+LL G+ P AET Q + + I+ E F + F IS A++ V R+L
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Query: 173 QIQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQ 232
+ + LK+K + T TL + + TL + D+
Sbjct: 244 K----ERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHR-------RYYHTLIKKDLNM 292
Query: 233 YMQAADIDGNGTI 245
+ AA I G I
Sbjct: 293 VVSAARISCGGAI 305
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 308 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 368 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 252 TAMTQR 257
MT +
Sbjct: 443 QMMTAK 448
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 331 ELGTVMRS--LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F + M ++ K + E L E K F DG +G+ T +
Sbjct: 68 FLSLMARKMKEQDSEEELI-----EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG I+Y+EF MM
Sbjct: 123 EMIREADIDGDGHINYEEFVRMM 145
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G I+Y EF
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 252 TAMTQR 257
M +
Sbjct: 143 RMMVSK 148
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF S+M R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F + M ++ K + E L E K F DG +G+ T +
Sbjct: 68 FLSLMARKMKEQDSEEELI-----EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG I+Y+EF MM
Sbjct: 123 EMIREADIDGDGHINYEEFVRMM 145
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G I+Y EF
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 252 TAMTQR 257
M +
Sbjct: 143 RMMVSK 148
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF S+M R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 60/221 (27%)
Query: 3 TGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL----- 57
TGL+ A K I K+ + K V+ EV + L P+I++ +ED +V L
Sbjct: 35 TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMC 93
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENAV 79
G++HRDL N L T N
Sbjct: 94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMN 150
Query: 80 LNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YGKEADIWSAEVILYILLCGVP 130
+ DFGL+ ++ G+P YI+PE+ +S +G E+D+WS + Y LL G P
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAI--ELVRR 169
P +T + ++ + ++ F SI + + +L+RR
Sbjct: 211 PFDTDTVKNTLNKVVLAD--YEMPSFLSIEAKDLIHQLLRR 249
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
+++ E D D DG+++Y+EF MM
Sbjct: 124 QMIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V Q ++ ADIDG+G ++Y EF
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFV 143
Query: 252 TAMTQR 257
MT +
Sbjct: 144 QMMTAK 149
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 25/135 (18%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVL-- 105
L +HRD++P+N L +D N + DFG + + + VG+P YI+PE+L
Sbjct: 210 LHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 106 ----WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS--- 158
YG E D WS V +Y +L G P +AE+ I+ E FQ FPS
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 323
Query: 159 -ISSSAIELVRRMLT 172
+S A +L++R++
Sbjct: 324 DVSEEAKDLIQRLIC 338
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 56/221 (25%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+TG FA K + + +K+ VR+E+ M L P +V A+EDD +++
Sbjct: 74 ATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEF 129
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
+H DL+PEN +FT+ N
Sbjct: 130 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE 189
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVP 130
L DFGL+ ++ G+ + APEV + G D+WS V+ YILL G+
Sbjct: 190 -LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 248
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P E + + + + N F IS + +R++L
Sbjct: 249 PFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 289
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 25/135 (18%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQ 107
L +HRD++P+N L +D N + DFG + + + VG+P YI+PE+L
Sbjct: 194 LHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 108 ------SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS--- 158
YG E D WS V +Y +L G P +AE+ I+ E FQ FPS
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 307
Query: 159 -ISSSAIELVRRMLT 172
+S A +L++R++
Sbjct: 308 DVSEEAKDLIQRLIC 322
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E + D DG+++Y+EF MM
Sbjct: 123 EMIREANIDGDGQVNYEEFVQMM 145
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ A+IDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
MT +
Sbjct: 143 QMMTAK 148
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLW-Q 107
L +++RDL+PEN L +D + DFGL S G+P Y+APEVL Q
Sbjct: 158 LNIVYRDLKPENIL---LDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELV 167
Y + D W +LY +L G+PP ++ + IL + + P+I++SA L+
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLL 270
Query: 168 RRMLTQ 173
+L +
Sbjct: 271 EGLLQK 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 56/221 (25%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+TG FA K + + +K+ VR+E+ M L P +V A+EDD +++
Sbjct: 180 ATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEF 235
Query: 58 ---------------------------------------GVMHRDLRPENFLFTSMDENA 78
+H DL+PEN +FT+ N
Sbjct: 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE 295
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVP 130
L DFGL+ ++ G+ + APEV + G D+WS V+ YILL G+
Sbjct: 296 -LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 354
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P E + + + + N F IS + +R++L
Sbjct: 355 PFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 395
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F DTD SGT+ EL+ + LG + ++K+ + D DG+GTID+ EF
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 252 TAMT----QRHKLERFEISLQSHPVDELGK-AFKD-----DGMGDDATIATIKEIMSEDD 301
MT +R E + + DE GK +FK+ +G++ T ++E++ E D
Sbjct: 68 QMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEAD 127
Query: 302 RDKDGRISYDEFRSMMKR 319
RD DG ++ +EF +MK+
Sbjct: 128 RDGDGEVNEEEFFRIMKK 145
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI L+ F +D DNSGTL+ E+ +GL K+G D+ Q ++ D + +G I Y +
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTD 114
Query: 250 FRTAMTQRHKLERFEISLQSH-----------PVDELGKAFKDDGMGDDATIATIKEIMS 298
F A + + E+ L V+EL + F D + + I ++
Sbjct: 115 FLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQ 174
Query: 299 EDDRDKDGRISYDEFRSMMKR 319
E D + DG I + EF MM +
Sbjct: 175 EVDLNGDGEIDFHEFMLMMSK 195
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 198 FTEMDTDNSGTLTYDELRE--GLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMT 255
F D D +G ++ +EL+ G + + L + + +Q D++G+G ID+ EF M+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Query: 256 QR 257
++
Sbjct: 195 KK 196
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS- 108
G+++RDL+PEN + ++ + DFGL +V G+ Y+APE+L +S
Sbjct: 141 GIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
+ + D WS ++Y +L G PP E + ILK ++N P ++ A +L++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLK 253
Query: 169 RMLTQ 173
++L +
Sbjct: 254 KLLKR 258
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS- 108
G+++RDL+PEN + ++ + DFGL +V G+ Y+APE+L +S
Sbjct: 141 GIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVR 168
+ + D WS ++Y +L G PP E + ILK ++N P ++ A +L++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLK 253
Query: 169 RMLTQ 173
++L +
Sbjct: 254 KLLKR 258
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 68 FLTMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 252 TAMTQR 257
MT +
Sbjct: 143 QMMTAK 148
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 74
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 56/223 (25%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLG--- 58
+TGL+ A K I R + +K++V+ E++VM L N+++ A+E ++L
Sbjct: 112 ATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEY 167
Query: 59 ----------------------------------------VMHRDLRPENFLFTSMDENA 78
++H DL+PEN L + D
Sbjct: 168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQ 227
Query: 79 VLNANDFGLSVFIE-------EVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVP 130
+ DFGL+ + G+P ++APEV+ + D+WS VI Y+LL G+
Sbjct: 228 I-KIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
P + + IL + + + F IS A E + ++L +
Sbjct: 287 PFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK 329
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F M ++ K E L+ E + F DG +G+ T +
Sbjct: 68 FLNLMARKMKDTDSEEKLK-----EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 5 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F M ++ K E L+ E + F DG +G+ T +
Sbjct: 65 FLNLMARKMKDTDSEEELK-----EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 119
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +M
Sbjct: 120 EMIREADVDGDGQVNYEEFVQVM 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 300 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 359
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F M ++ K E + E + F DG +G+ T +
Sbjct: 360 FLIMMARKMKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 414
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF MM
Sbjct: 415 EMIREADIDGDGQVNYEEFVQMM 437
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 375 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 434
Query: 252 TAMTQR 257
MT +
Sbjct: 435 QMMTAK 440
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF MM R
Sbjct: 323 ELGTVMRS--LGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR 366
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F M ++ K E L+ E + F DG +G+ T +
Sbjct: 68 FLNLMARKMKDTDSEEELK-----EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D D DG+++Y+EF +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLWQSY-- 109
++HRDL+PEN L +D+N + DFGLS + + GSP Y APEV+
Sbjct: 129 IVHRDLKPENLL---LDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 110 GKEADIWSAEVILYILLCGVPP 131
G E D+WS ++LY++L G P
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 36/152 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE---------------EVGSPYYIAP 102
G+ HRDL+PEN L ++ + + DF L I+ GS Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 103 EVL------WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVA------ 141
EV+ Y K D+WS VILYILL G PP W E A
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250
Query: 142 QAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
++I +G+ F + IS +A +L+ ++L +
Sbjct: 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVR 282
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 32 VMQYLSG--------------QPNIVKFKAAYEDDQFVLL--GVMHRDLRPENFLFTSMD 75
VM+Y++G +P+ V + A F L G+++RDL+ +N + +D
Sbjct: 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM---LD 476
Query: 76 ENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILL 126
+ DFG+ G+P YIAPE++ +Q YGK D W+ V+LY +L
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 127 CGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
G P E E + Q+I++ + + S+S A+ + + ++T+
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTK 579
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 32 VMQYLSG--------------QPNIVKFKAAYEDDQFVLL--GVMHRDLRPENFLFTSMD 75
VM+Y++G +P+ V + A F L G+++RDL+ +N + +D
Sbjct: 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM---LD 155
Query: 76 ENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILL 126
+ DFG+ G+P YIAPE++ +Q YGK D W+ V+LY +L
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 127 CGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
G P E E + Q+I++ + + S+S A+ + + ++T+
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTK 258
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D G +T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAF----KDD--------------GMGDDATIA 291
F M ++ K + +EL +AF KD +G+ T
Sbjct: 69 FLNLMARKMK--------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMM 317
+ E++ E D D DG+I+YDEF +M
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 36/152 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE---------------EVGSPYYIAP 102
G+ HRDL+PEN L S ++ + + DF L ++ GS Y+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 103 EVL------WQSYGKEADIWSAEVILYILLCGVPPI---------WAETE------QGVA 141
EV+ Y K D+WS V+LYI+L G PP W E +
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 142 QAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
++I +G+ F + ISS A +L+ ++L +
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLLVR 282
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RDL+ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 131 VVYRDLKLENLM---LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RDL+ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 130 VVYRDLKLENLM---LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK 246
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RDL+ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 132 VVYRDLKLENLM---LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK 248
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS- 108
G+++RDL+ +N L +D DFG+ G+P YIAPE+L +
Sbjct: 144 GIIYRDLKLDNVL---LDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEI 149
YG D W+ V+LY +LCG P AE E + +AIL E+
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTL-TEFDVKQYMQAADIDGNGTIDYI 248
++QKLK F +D + G +T +LR+GL + G L FD+ + D DG+G IDY
Sbjct: 53 DVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDGSGNIDYT 110
Query: 249 EFRTAMTQRHKLERFEI--SLQSHPVDELGKA---------FKDDGMGD--DATIATIKE 295
EF A R +L + I + + VD G+ F + G+ + + +K+
Sbjct: 111 EFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
++ E D++ DG+I + EF MMK
Sbjct: 171 MIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 131 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RDL+ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 273 VVYRDLKLENLM---LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK 389
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 129 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 245
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RD++ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 126 VVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLWQS-Y 109
V++RDL+ EN + +D++ + DFGL + G+P Y+APEVL + Y
Sbjct: 270 VVYRDLKLENLM---LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G+ D W V++Y ++CG P + + + + + IL EI F P S L+++
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK 386
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D G +T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAF----KDD--------------GMGDDATIA 291
F M ++ K + +EL +AF KD +G+ T
Sbjct: 69 FLNLMARKMK--------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMM 317
+ E++ E D D DG+I+Y+EF +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 62/225 (27%)
Query: 2 STGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL---- 57
+T +FA K I K K D E+ ++ PNI+ K Y+D ++V +
Sbjct: 45 ATNXEFAVKIIDK-------SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97
Query: 58 --------------------------------------GVMHRDLRPENFLFTSMDENA- 78
GV+HRDL+P N L+ N
Sbjct: 98 XKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE 157
Query: 79 VLNANDFGLSVFIEE----VGSPYY----IAPEVL-WQSYGKEADIWSAEVILYILLCGV 129
+ DFG + + + +P Y +APEVL Q Y DIWS V+LY L G
Sbjct: 158 SIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGY 217
Query: 130 PPIWA---ETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
P +T + + I G+ + + S+S +A +LV + L
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXL 262
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F DTD SGT+ EL+ + LG + ++K+ + D DG+GTID+ EF
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 252 TAMTQRHKLERFEISLQSHPVDELGKAFK---DDG---------------MGDDATIATI 293
T MT + + +E+ KAF+ DD +G++ T +
Sbjct: 88 TMMTAKMG--------ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 139
Query: 294 KEIMSEDDRDKDGRISYDEFRSMMKR 319
+E+++E DR+ D I DEF +MK+
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMKK 165
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 59/217 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S N L D
Sbjct: 99 VYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---NGELKIAD 155
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G+PP A T
Sbjct: 156 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 138 QGVAQAILKGEINFQHDPFPS-ISSSAIELVRRMLTQ 173
Q + I + E FP ++ A +L+ R+L
Sbjct: 216 QETYRRISRVEFT-----FPDFVTEGARDLISRLLKH 247
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 85/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
A K + K +L K + +RREV + +L PNI++ + D V L
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 58 ---------------------------------GVMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S N L D
Sbjct: 99 VYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---NGELKIAD 155
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G+PP A T
Sbjct: 156 FGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 216 QETYRRISRVEFTFPD----FVTEGARDLISRLLKH 247
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVF------IEEVGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV E G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
A K + K +L K + +RREV + +L PNI++ + D V L
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDSTRVYLILEYAPLGT 94
Query: 58 ---------------------------------GVMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QDTYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L TS + + +DFG + + VG+PY++APEV+ +
Sbjct: 161 GVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F D D +GT+ EL+ + LG + ++K+ + D +G G +++ +F
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 252 TAMTQR--HKLERFEI--SLQSHPVDELGK-AFKD-----DGMGDDATIATIKEIMSEDD 301
T MTQ+ K + EI + + DE GK +FK+ +G++ T ++E++ E D
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 125
Query: 302 RDKDGRISYDEFRSMMKR 319
RD DG +S EF +MK+
Sbjct: 126 RDGDGEVSEQEFLRIMKK 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T ++ K + + E + F DG +G+ T +
Sbjct: 68 FLTXXARKXK-----DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEF 313
E + E D D DG+++Y+EF
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS-- 108
++HRDL+P N L +DEN VL DFGL+ + +V + +Y APE+L+ +
Sbjct: 133 ILHRDLKPNNLL---LDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 109 YGKEADIWSAEVILYILLCGVP 130
YG D+W+ IL LL VP
Sbjct: 190 YGVGVDMWAVGCILAELLLRVP 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 146 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 202
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 257
Query: 171 LTQ 173
L
Sbjct: 258 LKH 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 245
Query: 171 LTQ 173
L
Sbjct: 246 LKH 248
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 98 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 154
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 155 FGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 215 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 245
Query: 171 LTQ 173
L
Sbjct: 246 LKH 248
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 242
Query: 172 TQ 173
Sbjct: 243 KH 244
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 242
Query: 172 TQ 173
Sbjct: 243 KH 244
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 59/217 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 100 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 156
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 157 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 138 QGVAQAILKGEINFQHDPFPS-ISSSAIELVRRMLTQ 173
Q + I + E FP ++ A +L+ R+L
Sbjct: 217 QETYKRISRVEFT-----FPDFVTEGARDLISRLLKH 248
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 267
Query: 172 TQ 173
Sbjct: 268 KH 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 99 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 155
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 156 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 216 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 247
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKL----GSTLTEFD-------VKQYMQAAD 238
E ++L + F ++D + G L EL EG KL G T+++ D V +Q+ D
Sbjct: 38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVD 97
Query: 239 IDGNGTIDYIEFRTAMTQRHKL---ERFEISLQSHPVD--------ELGKAFKDDGMGDD 287
D NG I+Y EF T + L ER + Q D ELG+ F + D+
Sbjct: 98 FDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDE 157
Query: 288 ATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
T +++ E D++ DG + ++EF MM++
Sbjct: 158 ----TWHQVLQECDKNNDGEVDFEEFVEMMQK 185
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 172 TQ 173
Sbjct: 242 KH 243
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE + + + +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 245
Query: 171 LTQ 173
L
Sbjct: 246 LKH 248
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 243
Query: 171 LTQ 173
L
Sbjct: 244 LKH 246
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLT-EFDVKQYMQAADIDGNGTIDYI 248
+++KLK F +D D G +T ++L++GL K G L FD+ + D DG+G IDY
Sbjct: 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYT 107
Query: 249 EFRTAMTQRHKLERFEI--SLQSHPVD--------ELGKAFKDDGMGDDAT---IATIKE 295
EF A R +L + I + + VD EL + + T + +K
Sbjct: 108 EFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKR 167
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
++ + D++ DG+I + EF MMK
Sbjct: 168 MIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 172 TQ 173
Sbjct: 242 KH 243
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 98 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 154
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 155 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 215 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 211
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+WS V+ Y L G PP A T Q + I + E F ++ A +L+ R+L
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 267
Query: 172 TQ 173
Sbjct: 268 KH 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 98 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 154
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 155 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 215 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 242
Query: 171 LTQ 173
L
Sbjct: 243 LKH 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 52 DQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPE 103
D LG+++RDL+PEN L +DE + DFGLS G+ Y+APE
Sbjct: 144 DHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 104 VL-WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
V+ Q + AD WS V+++ +L G P + + ILK ++ +S+
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTE 256
Query: 163 AIELVRRMLTQ 173
A L+R + +
Sbjct: 257 AQSLLRALFKR 267
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 25/134 (18%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSV-FIEE--------VGSPYYIAPEVLW- 106
LG+++RD++ EN L +D N + DFGLS F+ + G+ Y+AP+++
Sbjct: 178 LGIIYRDIKLENIL---LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPIWAETEQG----VAQAILKGEINFQHDPFPS-I 159
+ K D WS V++Y LL G P + E+ +++ ILK E P+P +
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-----PPYPQEM 289
Query: 160 SSSAIELVRRMLTQ 173
S+ A +L++R+L +
Sbjct: 290 SALAKDLIQRLLMK 303
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 93
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 94 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 150
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 151 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 210
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 211 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 242
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
A K + K +L K + +RREV + +L PNI++ + D V L
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 58 ---------------------------------GVMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 98 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 154
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 155 FGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 215 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 95 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 151
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 152 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 212 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S E GSP Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 170 ML 171
L
Sbjct: 247 FL 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLL--------- 57
A K + K +L K + +RREV + +L PNI++ + D V L
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 91
Query: 58 ---------------------------------GVMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 92 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 148
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 149 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 208
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 209 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 240
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E L DFG SV G+ Y+ PE++ + + +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 245
Query: 171 LTQ 173
L
Sbjct: 246 LKH 248
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 52 DQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPE 103
D LG+++RDL+PEN L +DE + DFGLS G+ Y+APE
Sbjct: 140 DHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 104 VL-WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
V+ + + + AD WS V+++ +L G P + + ILK ++ P S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSP 251
Query: 163 AIELVRRML 171
+ + RML
Sbjct: 252 EAQSLLRML 260
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 156 FPSISSSAIELVRRMLTQ---IQXXXXXXXXXXXXXXEIQKLKEKFTEMDTDNSGTLTYD 212
PS+++ AIE +R+ Q E ++L + F +D + G L
Sbjct: 25 LPSLAN-AIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 213 ELREGLAKL-GSTLTEFDVKQY-------MQAADIDGNGTIDYIEFRTAMTQRHKL---E 261
EL +G +KL G + FD+ Q + AAD D NG IDY EF T R L +
Sbjct: 84 ELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD 143
Query: 262 RFEISLQSH--------PVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEF 313
+ E + Q VDEL F G+ D T KE++S D + DG + ++EF
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVF---GL-DHLESKTWKEMISGIDSNNDGDVDFEEF 199
Query: 314 RSMMKR 319
M+++
Sbjct: 200 CKMIQK 205
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D G +T +L + LG TE +++ + DGNGTID+ +
Sbjct: 309 QIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQ 368
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T M ++ K E + E + F DG +G+ T +
Sbjct: 369 FLTMMARKMKDTDSE-----EEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVD 423
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
E++ E D DG+++Y++F MM
Sbjct: 424 EMIREAGIDGDGQVNYEQFVQMM 446
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D +G ++ +LR + LG LT+ +V + ++ A IDG+G ++Y +F
Sbjct: 384 EEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFV 443
Query: 252 TAMTQR 257
MT +
Sbjct: 444 QMMTAK 449
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 52 DQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPE 103
D LG+++RDL+PEN L +DE + DFGLS G+ Y+APE
Sbjct: 141 DHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 197
Query: 104 VL-WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
V+ + + + AD WS V+++ +L G P + + ILK ++ P S
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSP 252
Query: 163 AIELVRRML 171
+ + RML
Sbjct: 253 EAQSLLRML 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 52 DQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPE 103
D LG+++RDL+PEN L +DE + DFGLS G+ Y+APE
Sbjct: 140 DHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 104 VL-WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
V+ + + + AD WS V+++ +L G P + + ILK ++ P S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSP 251
Query: 163 AIELVRRML 171
+ + RML
Sbjct: 252 EAQSLLRML 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW-Q 107
++HRDL+ EN L +D + + DFG S F GSP Y APE+ +
Sbjct: 132 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDTF---CGSPPYAAPELFQGK 185
Query: 108 SY-GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
Y G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENL 241
Query: 167 VRRMLT 172
++R L
Sbjct: 242 LKRFLV 247
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T ++ K E + E + F DG +G+ T +
Sbjct: 69 FLTXXARKXKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 123
Query: 295 EIMSEDDRDKDGRISYDEF 313
+ + E D D DG+++Y+EF
Sbjct: 124 QXIREADIDGDGQVNYEEF 142
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T T+ ++ ++ D DG+GTID+ EF
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 251 RTAMTQRHK-----------LERFEISLQSH----PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K E F I ++ +EL + F+ G+ T I+
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFR--ASGEHVTDEEIES 133
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 134 LMKDGDKNNDGRIDFDEFLKMME 156
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T T+ ++ ++ D DG+GTID+ EF
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 251 RTAMTQRHK-----------LERFEISLQSH----PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K E F I ++ +EL + F+ G+ T I+
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFR--ASGEHVTDEEIES 133
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 134 LMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L M L DFG SV + G+ Y+ PE++ +++ +
Sbjct: 136 VIHRDIKPENLL---MGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+W A V+ Y L G+PP + + + I+ ++ F P +S + +L+ ++L
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLL 248
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ GSP Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 170 ML 171
L
Sbjct: 247 FL 248
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L M L DFG SV + G+ Y+ PE++ +++ +
Sbjct: 135 VIHRDIKPENLL---MGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+W A V+ Y L G+PP + + + I+ ++ F P +S + +L+ ++L
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLL 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ GSP Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 170 ML 171
L
Sbjct: 247 FL 248
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ GSP Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 170 ML 171
L
Sbjct: 247 FL 248
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 65/224 (29%)
Query: 4 GLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYED------------ 51
G Q+ K I+ ++ E+++ RREVAV+ + PNIV+++ ++E+
Sbjct: 49 GRQYVIKEINISRMSSK-EREESRREVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCE 106
Query: 52 ----------------------DQFVLLG----------VMHRDLRPENFLFTSMDENAV 79
D FV + ++HRD++ +N T ++
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGT 163
Query: 80 LNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSYGKEADIWSAEVILYILLCGVP 130
+ DFG++ + +G+PYY++PE+ + Y ++DIW+ +LY L
Sbjct: 164 VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
Query: 131 PIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQI 174
A + + + I+ G FP +S +R +++Q+
Sbjct: 224 AFEAGSMKNLVLKIISGS-------FPPVSLHYSYDLRSLVSQL 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L M L DFG SV + G+ Y+ PE++ +++ +
Sbjct: 135 VIHRDIKPENLL---MGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+W A V+ Y L G+PP + + + I+ ++ F P +S + +L+ ++L
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLL 247
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I KE F D D G +T +EL + L TE +++ + D DGNGTI++ E
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFK-----DDG-------------MGDDATIA 291
F + M ++ K + +EL +AFK +G +G+ T
Sbjct: 68 FLSLMAKKVK--------DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE 119
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMM 317
+++++ E D D DG+++Y+EF MM
Sbjct: 120 EVEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF- 250
++LKE F D D +G ++ ELR + LG LT+ +V+Q ++ AD+DG+G ++Y EF
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 251 RTAMTQR 257
+ MT R
Sbjct: 143 KMMMTVR 149
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 27/91 (29%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDA 288
D K+ D DG+G I E T + SL +P +E
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIR----------SLDQNPTEE-------------- 46
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+++++SE D D +G I +DEF S+M +
Sbjct: 47 ---ELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L S E + N FG SV G+ Y+ PE++ + + +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIAN---FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 187
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS-ISSSAIELVRRM 170
+ D+WS V+ Y L G PP A T Q + I + E FP ++ A +L+ R+
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----FPDFVTEGARDLISRL 242
Query: 171 LTQ 173
L
Sbjct: 243 LKH 245
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
++ + KE F+ D D G +T EL + LG TE +++ M D DGNGT+D+ E
Sbjct: 8 QVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F M ++ K + + E + F DG +G+ + +
Sbjct: 68 FLGMMARKMK-----DTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEF 313
E++ D D DG+++Y+EF
Sbjct: 123 EMIRAADTDGDGQVNYEEF 141
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++MSE DRD +G + + EF MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMAR 74
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 57/216 (26%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E + N
Sbjct: 98 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN--- 154
Query: 85 FGLSVFIEE------VGSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG SV G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 155 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 138 QGVAQAILKGEINFQHDPFPSISSSAIELVRRMLTQ 173
Q + I + E F ++ A +L+ R+L
Sbjct: 215 QETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS- 108
GV+HRD++ ++ L T + + +DFG I + VG+PY++APEV+ +S
Sbjct: 161 GVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL 217
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAET 136
Y E DIWS +++ ++ G PP ++++
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 122 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 238 ALLHKILVE 246
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ GSP Y APE+ + Y
Sbjct: 127 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 239
Query: 170 ML 171
L
Sbjct: 240 FL 241
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHKLE---RFEISLQSH------------PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K + + E L+ ++ELG+ + G+ T I++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIED 136
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 137 LMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW-Q 107
++HRDL+ EN L +D + + DFG S F G+P Y APE+ +
Sbjct: 135 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDAF---CGAPPYAAPELFQGK 188
Query: 108 SY-GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
Y G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENL 244
Query: 167 VRRMLT 172
++R L
Sbjct: 245 LKRFLV 250
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHKLE---RFEISLQSH------------PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K + + E L + ++ELG+ + G+ T I++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIED 136
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 137 LMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLW-QS 108
+ + HRDL+ EN L L DFG S V + VG+P YIAPEVL Q
Sbjct: 135 MQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 109 Y-GKEADIWSAEVILYILLCGVPP 131
Y GK AD+WS V LY++L G P
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHK-----------LERFEISLQSH----PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K + F I ++ ++ELG+ + G+ T I++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIED 136
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 137 LMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 59/217 (27%)
Query: 7 FACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDD-------QFVLLG- 58
A K + K +L K + +RREV + +L PNI++ + D ++ LG
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 59 ----------------------------------VMHRDLRPENFLFTSMDENAVLNAND 84
V+HRD++PEN L S E L D
Sbjct: 96 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIAD 152
Query: 85 FGLSVFIEEV------GSPYYIAPEVL-WQSYGKEADIWSAEVILYILLCGVPPIWAETE 137
FG S G+ Y+ PE++ + + ++ D+WS V+ Y L G PP A T
Sbjct: 153 FGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 138 QGVAQAILKGEINFQHDPFPS-ISSSAIELVRRMLTQ 173
Q + I + E FP ++ A +L+ R+L
Sbjct: 213 QETYKRISRVEFT-----FPDFVTEGARDLISRLLKH 244
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLWQSY 109
+ V HRDL+ EN L L DFG S V + VG+P YIAPEVL +
Sbjct: 133 MQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 110 --GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH--DPFPSISSSAIE 165
GK AD+WS V LY++L G P E + + +N Q+ + IS
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 251
Query: 166 LVRRMLT 172
L+ R+
Sbjct: 252 LISRIFV 258
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M ++ K
Sbjct: 68 FLTMMARKMK 77
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 16 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 251 RTAMTQRHKLE---RFEISLQSH------------PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K + + E L + ++ELG+ + G+ T I++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIED 133
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 134 LMKDSDKNNDGRIDFDEFLKMME 156
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL LG TE +++ + D DGNGTI++ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG---------------MGDDATIATIK 294
F T + K E + E + F DG +G+ T +
Sbjct: 68 FLTXXARCXKDTDSE-----EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 295 EIMSEDDRDKDGRISYDEF 313
E + E D D DG+++Y+EF
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 267 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNE 350
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLWQSY 109
+ V HRDL+ EN L L DFG S V + VG+P YIAPEVL +
Sbjct: 134 MQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 110 --GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH--DPFPSISSSAIE 165
GK AD+WS V LY++L G P E + + +N Q+ + IS
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 166 LVRRMLT 172
L+ R+
Sbjct: 253 LISRIFV 259
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ G+P Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G E D+WS VILY L+ G P + + + + +L+G+ PF +S+ L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 170 ML 171
L
Sbjct: 247 FL 248
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 240 ALLHKILVE 248
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLWQSY 109
+ V HRDL+ EN L L DFG S V + VG+P YIAPEVL +
Sbjct: 134 MQVAHRDLKLENTLLDG-SPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE 192
Query: 110 --GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH--DPFPSISSSAIE 165
GK AD+WS V LY++L G P E + + +N Q+ + IS
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 166 LVRRMLT 172
L+ R+
Sbjct: 253 LISRIFV 259
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M ++ K
Sbjct: 68 FLTMMARKMK 77
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M ++ K
Sbjct: 68 FLTMMARKMK 77
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M ++ K
Sbjct: 68 FLTMMARKMK 77
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 147 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNE 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 190 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNE 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEEV----GSPYYIAPEVLW-QSY- 109
++HRDL+ EN L +D + + DFG S F ++ G+P Y APE+ + Y
Sbjct: 134 IVHRDLKAENLL---LDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGE 148
G E D+WS VILY L+ G P + + + + +L+G+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 140 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNE 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 145 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNE 228
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI----------EEVGSPYYIAPEVLW 106
+G+ HRD++PEN L +DE L +DFGL+ + G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLL---LDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 107 QS--YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
+ + + D+WS ++L +L G P W + + E +P+ I S+ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 165 ELVRRMLTQ 173
L+ ++L +
Sbjct: 239 ALLHKILVE 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-S 108
GV+HRD++ ++ L T + + +DFG + + VG+PY++APE++ +
Sbjct: 136 GVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAE 135
YG E DIWS +++ ++ G PP + E
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNE 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFI--------EEVGSPYYIAPEVLW-QSY 109
V+HRD++ +N L MD + L DFG I E VG+PY++APEV+ ++Y
Sbjct: 137 VIHRDIKSDNILL-GMDGSVKLT--DFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 110 GKEADIWSAEVILYILLCGVPPIWAET 136
G + DIWS ++ ++ G PP E
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW-Q 107
++HRDL+ EN L +D + + DFG S F GSP Y APE+ +
Sbjct: 135 IVHRDLKAENLL---LDGDMNIKIADFGFSNEFTVGNKLDTF---CGSPPYAAPELFQGK 188
Query: 108 SY-GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGE 148
Y G E D+WS VILY L+ G P + + + + +L+G+
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS-- 108
++HRD++P N L + E+ + DFG+S + VG+P ++APE L ++
Sbjct: 158 IIHRDIKPSNLL---VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRK 214
Query: 109 --YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
GK D+W+ V LY + G P E + I + F P I+ +L
Sbjct: 215 IFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQ--PDIAEDLKDL 272
Query: 167 VRRML 171
+ RML
Sbjct: 273 ITRML 277
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF- 250
++LKE F D D +G ++ ELR + LG LT+ +V+Q ++ AD+DG+G ++Y EF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 251 RTAMTQR 257
+ MT R
Sbjct: 64 KMMMTVR 70
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 283 GMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T +++++ E D D DG+++Y+EF MM
Sbjct: 32 NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQR 257
F T M ++
Sbjct: 68 FLTMMARK 75
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQR 257
F T M ++
Sbjct: 68 FLTMMARK 75
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 250 FRTAMTQR 257
F T M ++
Sbjct: 69 FLTMMARK 76
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 32 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQR 257
F T M ++
Sbjct: 68 FLTMMARK 75
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVLWQSY 109
++HRD++P+N L +D N L DFG++ + E +G+ Y +PE Q+
Sbjct: 132 IVHRDIKPQNIL---IDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE---QAK 185
Query: 110 GKEAD----IWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIE 165
G+ D I+S ++LY +L G PP ET +A I D P++++ +
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDSVPNVTTDVRK 238
Query: 166 LVRRMLTQI 174
+ + L+ +
Sbjct: 239 DIPQSLSNV 247
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF- 250
++LKE F D D +G ++ ELR + LG LT+ +V+Q ++ AD+DG+G ++Y EF
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 251 RTAMTQR 257
+ MT R
Sbjct: 69 KMMMTVR 75
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T +++++ E D D DG+++Y+EF MM
Sbjct: 38 LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL--------SVFIEEVGSPYYIAPEVLW-QS 108
G+++RDL+ +N L +D++ + DFG+ + E G+P YIAPE+L Q
Sbjct: 139 GIVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 109 YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAI 144
Y D WS V+LY +L G P + E+ + +I
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-Y 109
VMHRD++P N T+ V+ D GL F VG+PYY++PE + ++ Y
Sbjct: 157 VMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGY 213
Query: 110 GKEADIWSAEVILY 123
++DIWS +LY
Sbjct: 214 NFKSDIWSLGCLLY 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYG 110
G++HRDL+P N +++E++ L DFGL+ +E V + +Y APE++ W Y
Sbjct: 151 GIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 111 KEADIWSAEVILYILLCG 128
+ DIWS I+ LL G
Sbjct: 208 QTVDIWSVGCIMAELLQG 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 23/108 (21%)
Query: 41 NIVKFKAAYEDD-QFVLL------------GVMHRDLRPENFLFTSMDENAVLNANDFGL 87
NIVK +A ++ QF++ G++HRDL+P N +++E++ L DFGL
Sbjct: 121 NIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDSELRILDFGL 177
Query: 88 SVFIEE-----VGSPYYIAPEVL--WQSYGKEADIWSAEVILYILLCG 128
+ +E V + +Y APE++ W Y + DIWS I+ LL G
Sbjct: 178 ARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHKLE---RFEISLQSH------------PVDELGKAFKDDGMGDDATIATIKE 295
M ++ K + + E L + ++ELG+ + G+ I++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR--ATGEHVIEEDIED 136
Query: 296 IMSEDDRDKDGRISYDEFRSMMK 318
+M + D++ DGRI +DEF MM+
Sbjct: 137 LMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYG 110
G++HRDL+P N +++E+ L DFGL+ +E V + +Y APE++ W Y
Sbjct: 143 GIIHRDLKPSN---VAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 111 KEADIWSAEVILYILLCG 128
+ DIWS I+ LL G
Sbjct: 200 QTVDIWSVGCIMAELLQG 217
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 27/148 (18%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D DNSG+++ EL + LG + +E +V M D+DGN I++ E
Sbjct: 9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFK-----DDGM-------------GDDATIA 291
F M+++ K E EL +AFK DG+ G+ T A
Sbjct: 69 FLALMSRQLKCNDSE--------QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+ E++ E D G I+ +F +++ +
Sbjct: 121 EVDEMLRE-VSDGSGEINIKQFAALLSK 147
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVL-WQSY 109
++H D++PEN + + ++V DFGL+ + + + APE++ +
Sbjct: 169 SIVHLDIKPENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
G D+W+ V+ Y+LL G+ P E + Q + + + F D F S+S A + ++
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 170 MLTQ 173
+L +
Sbjct: 288 LLQK 291
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DG+GTID+ E
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M ++ K
Sbjct: 68 FLTMMARKMK 77
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D DG I + EF +MM R
Sbjct: 31 ELGTVMR--SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 74
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
V+HRD++ +N L MD + L DFG I VG+PY++APEV+ ++Y
Sbjct: 138 VIHRDIKSDNILL-GMDGSVKLT--DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 110 GKEADIWSAEVILYILLCGVPP 131
G + DIWS ++ ++ G PP
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
V+HRD++ +N L MD + L DFG I VG+PY++APEV+ ++Y
Sbjct: 137 VIHRDIKSDNILL-GMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 110 GKEADIWSAEVILYILLCGVPP 131
G + DIWS ++ ++ G PP
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLWQSY 109
+ V HRDL+ EN L L FG S V + VG+P YIAPEVL +
Sbjct: 134 MQVCHRDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 110 --GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH--DPFPSISSSAIE 165
GK AD+WS V LY++L G P E + + +N Q+ + IS
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 166 LVRRMLT 172
L+ R+
Sbjct: 253 LISRIFV 259
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
V+HRD++ +N L MD + L DFG I VG+PY++APEV+ ++Y
Sbjct: 137 VIHRDIKSDNILL-GMDGSVKLT--DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 110 GKEADIWSAEVILYILLCGVPP 131
G + DIWS ++ ++ G PP
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 175 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 232
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS---VFIEE----VGSPYYIAPEVLWQSY 109
+ V HRDL+ EN L L FG S V + VG+P YIAPEVL +
Sbjct: 134 MQVCHRDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 110 --GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH--DPFPSISSSAIE 165
GK AD+WS V LY++L G P E + + +N Q+ + IS
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 166 LVRRMLT 172
L+ R+
Sbjct: 253 LISRIFV 259
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++LKE F D D +G ++ ELR + LG LT+ +V + ++ AD+DG+G I+Y EF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 252 TAMTQR 257
M +
Sbjct: 64 KVMMAK 69
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 226 TEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMG 285
+E ++K+ + D D NG I E R MT +G
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTN---------------------------LG 34
Query: 286 DDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+ T + E++ E D D DG+I+Y+EF +M
Sbjct: 35 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 66
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E++ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 148 IIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E++ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 152 IIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 157 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 214 TVDIWSVGCIMAELLTG 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 151 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 145 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 202 TVDIWSVGCIMAELLTG 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 153 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 152 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 148 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 158 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 158 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 166 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 158 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 156 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 213 TVDIWSVGCIMAELLTG 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 148 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 165 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 222 TVDIWSVGCIMAELLTG 238
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 148 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 152 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 151 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 166 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 153 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQP 233
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 169 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 226 TVDIWSVGCIMAELLTG 242
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D GT+T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F T M + K
Sbjct: 68 FLTMMARIMK 77
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELG + +G + T A ++++++E D D +G I + EF +MM R
Sbjct: 31 ELGTVMR--SLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 169 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 226 TVDIWSVGCIMAELLTG 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 166 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 152 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 165 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 222 TVDIWSVGCIMAELLTG 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 160 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 217
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQP 240
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 153 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 143 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 200 TVDIWSVGCIMAELLTG 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 175 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 143 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 200 TVDIWSVGCIMAELLTG 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 149 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 206
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQP 229
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F+ D D G +T EL + LG TE +++ + D DGNGTID+ E
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 250 FRTAMTQRHK 259
F M ++ K
Sbjct: 68 FLNLMARKMK 77
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYG 110
GV+HRDL+P N +++E+ L DFGL+ + V + +Y APEV+ W Y
Sbjct: 146 GVVHRDLKPGNL---AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 111 KEADIWSAEVILYILLCG 128
+ DIWS I+ +L G
Sbjct: 203 QTVDIWSVGCIMAEMLTG 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 177 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 234
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQP 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 220 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 277
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQP 300
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 252 TAMTQR 257
MT +
Sbjct: 62 QMMTAK 67
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 27/91 (29%)
Query: 227 EFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGD 286
E ++++ + D DGNG I E R MT +G+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTN---------------------------LGE 33
Query: 287 DATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
T + E++ E D D DG+++Y+EF MM
Sbjct: 34 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 142 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 142 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 179 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 236
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQP 259
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E++ L DFGL ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYG 110
GV+HRDL+P N +++E+ L DFGL+ + V + +Y APEV+ W Y
Sbjct: 164 GVVHRDLKPGNL---AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 220
Query: 111 KEADIWSAEVILYILLCG 128
+ DIWS I+ +L G
Sbjct: 221 QTVDIWSVGCIMAEMLTG 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 142 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 142 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 169 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 226
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 144 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 201 TVDIWSVGCIMAELLTG 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 61 HRDLRPENFLFTSMDENAVLNANDFG---------LSVFIEEVGSPYYIAPEVLWQSYGK 111
HRD++PEN L S D+ A L DFG L+ VG+ YY APE +S+
Sbjct: 157 HRDVKPENILV-SADDFAYL--VDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 112 -EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
ADI++ +LY L G PP QG ++ IN Q P PS I +
Sbjct: 214 YRADIYALTCVLYECLTGSPPY-----QGDQLSVXGAHIN-QAIPRPSTVRPGIPV 263
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----------SVFIEEVGSPYYIAPEVLW 106
G+++RDL+ +N L +D++ + DFG+ + F G+P YIAPE+L
Sbjct: 138 GIVYRDLKLDNIL---LDKDGHIKIADFGMCKENMLGDAKTNXF---CGTPDYIAPEILL 191
Query: 107 -QSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAI 144
Q Y D WS V+LY +L G P + E+ + +I
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 157 IIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 214 TVDIWSVGCIMAELLTG 230
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 151 IIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y +
Sbjct: 151 IIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI--------EEVGSPYYIAPEVLW--Q 107
+HRD++PEN L T +++V+ DFG + + +EV + +Y +PE+L
Sbjct: 122 NCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWA 134
YG D+W+ + LL GV P+W
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGV-PLWP 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLW--QS 108
++HRDL+P+N L +++ L DFGL+ F EV + +Y AP+VL ++
Sbjct: 129 ILHRDLKPQNLL---INKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 109 YGKEADIWSAEVILYILLCGVP 130
Y DIWS IL ++ G P
Sbjct: 186 YSTSIDIWSCGCILAEMITGKP 207
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D DN+G+++ EL + LG + +E +V M D+DGN I++ E
Sbjct: 9 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFK-----DDGM-------------GDDATIA 291
F M+++ K + EL +AFK DG+ G+ T A
Sbjct: 69 FLALMSRQLK--------SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMMKRGT 321
+ +++ E D G I+ +F +++ +G+
Sbjct: 121 EVDDMLREVS-DGSGEINIQQFAALLSKGS 149
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 146 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 203
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQP 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 145 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 202
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQP 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 142 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 199
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQP 222
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 252 TAMTQR 257
MT +
Sbjct: 68 QMMTAK 73
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 27/97 (27%)
Query: 221 LGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFK 280
+ T +E ++++ + D DGNG I E R MT
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN------------------------ 36
Query: 281 DDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 37 ---LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 70
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ + V + +Y APE++ W Y +
Sbjct: 153 IIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 252 TAMTQR 257
MT +
Sbjct: 66 QMMTAK 71
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 224 TLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG 283
T +E ++++ + D DGNG I E R MT
Sbjct: 2 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------------------------- 34
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 35 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 252 TAMTQR 257
MT +
Sbjct: 69 QMMTAK 74
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 27/98 (27%)
Query: 220 KLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAF 279
K+ T +E ++++ + D DGNG I E R MT
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN----------------------- 37
Query: 280 KDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 38 ----LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 71
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 154 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 211
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQP 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 17/88 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW---- 106
V+HRD++ +N L T ENA + DFG+S ++ +G+PY++APEV+
Sbjct: 150 VIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPI 132
+Y ++D+WS + + G PP+
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ + V + +Y APE++ W Y +
Sbjct: 153 IIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ + V + +Y APE++ W Y +
Sbjct: 153 IIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++LKE F +D + G + D LR L LG LTE +++ + D DG+GT+DY EF+
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 252 TAM 254
M
Sbjct: 67 CLM 69
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+GD+ T I+ +++E D D G + Y+EF+ +M
Sbjct: 36 LGDELTEDEIENMIAETDTDGSGTVDYEEFKCLM 69
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 252 TAMT 255
MT
Sbjct: 65 QMMT 68
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 224 TLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG 283
T +E ++++ + D DGNG I E R MT
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------------------------- 33
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 34 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N + ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 136 GIIHRDVKPANIMISATNAVKVM---DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVA---------YQHVREDPIP 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
V+HR+++ +N L MD + L DFG I VG+PY++APEV+ ++Y
Sbjct: 138 VIHRNIKSDNILL-GMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 110 GKEADIWSAEVILYILLCGVPP 131
G + DIWS ++ ++ G PP
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ W Y
Sbjct: 175 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNM 231
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 232 TVDIWSVGCIMAELLTG 248
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
IQ L F ++D D S +L DE R+GLAKLG L + + + + D +G+GT+D EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 251 RTAM 254
A+
Sbjct: 96 LRAL 99
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L D+GL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N L ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 136 GIIHRDVKPANILISATNAVKVV---DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---------YQHVREDPIP 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
G+ HRD++P+N L + AVL DFG + + + S YY APE+++ +
Sbjct: 141 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 109 -YGKEADIWSAEVILYILLCGVP 130
Y D+WSA +L LL G P
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 59 VMHRDLRPENFLFTSMD--ENAVLNANDFGLSV--------FIEEVGSPYYIAPEVLWQS 108
+HRDL+P+N L + D E VL DFGL+ F E+ + +Y PE+L S
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 109 --YGKEADIWSAEVILYILLCGVP 130
Y DIWS I +L P
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTP 236
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 252 TAMTQR 257
MT +
Sbjct: 89 QMMTAK 94
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 27/97 (27%)
Query: 221 LGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFK 280
+ T +E ++++ + D DGNG I E R MT
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTN------------------------ 57
Query: 281 DDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 58 ---LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F DTD SGT+ EL+ + LG + ++K+ + D DG+GTID+ EF
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 252 TAMTQR 257
T MT +
Sbjct: 90 TMMTAK 95
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 27/80 (33%)
Query: 238 DIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIM 297
D DG+GTID E + AM +L P E IK+++
Sbjct: 40 DTDGSGTIDAKELKVAMR----------ALGFEPKKE-----------------EIKKMI 72
Query: 298 SEDDRDKDGRISYDEFRSMM 317
SE D+D G I ++EF +MM
Sbjct: 73 SEIDKDGSGTIDFEEFLTMM 92
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N + ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 136 GIIHRDVKPANIMISATNAVKVM---DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---------YQHVREDPIP 238
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D DN+G+++ EL + LG + +E +V M D+DGN I++ E
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 250 FRTAMTQRHK 259
F M+++ K
Sbjct: 68 FLALMSRQLK 77
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N + ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 136 GIIHRDVKPANIMISATNAVKVM---DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---------YQHVREDPIP 238
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 52/157 (33%)
Query: 16 KLVKDYEKDDVRREVAVMQYLSGQPNIVK------------------------FKAAYE- 50
K++K +K+ ++RE+ +++ L G PNI+ FK Y+
Sbjct: 68 KILKPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT 127
Query: 51 ----DDQFVL------------LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-- 92
D +F + +G+MHRD++P N + E+ L D+GL+ F
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPG 185
Query: 93 -----EVGSPYYIAPEVL--WQSYGKEADIWSAEVIL 122
V S Y+ PE+L +Q Y D+WS +L
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G I+Y EF
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 252 TAMTQR 257
M +
Sbjct: 68 RMMVSK 73
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 27/80 (33%)
Query: 238 DIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIM 297
D DGNG I E R MT LG+ DD + E++
Sbjct: 18 DRDGNGLISAAELRHVMTN------------------LGEKLTDD---------EVDEMI 50
Query: 298 SEDDRDKDGRISYDEFRSMM 317
E D D DG I+Y+EF MM
Sbjct: 51 READIDGDGHINYEEFVRMM 70
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N + ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 136 GIIHRDVKPANIMISATNAVKVM---DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---------YQHVREDPIP 238
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKE 112
++H DL+PEN L + + DFG S + + + S +Y APEV L YG
Sbjct: 221 IIHCDLKPENILLKQQGRSGI-KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMP 279
Query: 113 ADIWSAEVILYILLCGVPPIWAETE 137
D+WS IL LL G P + E E
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKE 112
++H DL+PEN L + + DFG S + + + S +Y APEV L YG
Sbjct: 221 IIHCDLKPENILLKQQGRSGI-KVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMP 279
Query: 113 ADIWSAEVILYILLCGVPPIWAETE 137
D+WS IL LL G P + E E
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----------VGSPYYIAPE-VL 105
G++HRD++P N + ++ + V+ DFG++ I + +G+ Y++PE
Sbjct: 153 GIIHRDVKPANIMISATNAVKVM---DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQH---DPFP 157
S +D++S +LY +L G PP ++ VA +QH DP P
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---------YQHVREDPIP 255
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEV-LWQSYGKE 112
++H DL+PEN L + + DFG S + + + S +Y APEV L YG
Sbjct: 221 IIHCDLKPENILLKQQGRSGI-KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMP 279
Query: 113 ADIWSAEVILYILLCGVPPIWAETE 137
D+WS IL LL G P + E E
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----SVFIEEVGSPYYIAPEVL--WQSYG 110
G++HRDL+P N +++E+ L DFGL S V + +Y APEV+ W Y
Sbjct: 148 GIIHRDLKPGNL---AVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 111 KEADIWSAEVILYILLCG 128
+ DIWS I+ ++ G
Sbjct: 205 QTVDIWSVGCIMAEMITG 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV--------GSPYYIAPEVL---WQ 107
++HRD++ +N L + + VL +DFG S + + G+ Y+APE++ +
Sbjct: 143 IVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL 145
YGK ADIWS + + G PP + E G QA +
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAM 235
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLS-----VFIEEVGSPYYIAPEVLW---QS 108
++HRDLR N S+DENA + A DFGLS +G+ ++APE + +S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 109 YGKEADIWSAEVILYILLCGVPP 131
Y ++AD +S +ILY +L G P
Sbjct: 205 YTEKADTYSFAMILYTILTGEGP 227
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L ++F ++D DNSG+L+ +E L +L V++ + D DGNG +D+ E
Sbjct: 18 EIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKE 73
Query: 250 FRTAMTQ----RHKLERFEISLQSHPVDELG-----------KAFKDDGMGDDATIATIK 294
F ++Q K ++ + + + +D+ G K + + D +
Sbjct: 74 FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 133
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
+ + D+D DGRIS++EF +++
Sbjct: 134 KTIINADKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L ++F ++D DNSG+L+ +E L +L V++ + D DGNG +D+ E
Sbjct: 19 EIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKE 74
Query: 250 FRTAMTQ----RHKLERFEISLQSHPVDELG-----------KAFKDDGMGDDATIATIK 294
F ++Q K ++ + + + +D+ G K + + D +
Sbjct: 75 FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 134
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
+ + D+D DGRIS++EF +++
Sbjct: 135 KTIINADKDGDGRISFEEFCAVV 157
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL------SVFIE-EVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL S +E EV + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLC 127
+ DIWS I+ ++C
Sbjct: 203 KENVDIWSVGCIMGEMVC 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS-- 108
++HRDL+P+N L S + L DFGL+ + EV + +Y AP+VL S
Sbjct: 140 ILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 109 YGKEADIWSAEVILYILLCGVP 130
Y DIWS I ++ G P
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKP 218
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS-- 108
++HRDL+P+N L S + L DFGL+ + EV + +Y AP+VL S
Sbjct: 140 ILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 109 YGKEADIWSAEVILYILLCGVP 130
Y DIWS I ++ G P
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKP 218
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D DN+G+++ EL + LG + +E +V M D+DGN I++ E
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 250 FRTAMTQRHK 259
F M+++ K
Sbjct: 68 FLALMSRQLK 77
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ ELR + LG LT+ +V + ++ ADIDG+G ++Y EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 252 TAM 254
M
Sbjct: 65 QMM 67
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 224 TLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG 283
T +E ++++ + D DGNG I E R MT
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------------------------- 33
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y+EF MM
Sbjct: 34 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVL-WQSYGK 111
V+HRD++PEN L E + DFG SV + G+ Y+ PE++ + + +
Sbjct: 144 VIHRDIKPENLLLGLKGELKI---ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRRML 171
+ D+W V+ Y LL G PP + + + I+K ++ F S+ + A +L+ ++L
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP----ASVPTGAQDLISKLL 256
Query: 172 TQ 173
Sbjct: 257 RH 258
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + KE F D DN+G+++ EL + LG + +E +V M D+DGN I++ E
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 250 FRTAMTQRHK 259
F M+++ K
Sbjct: 68 FLALMSRQLK 77
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L ++F ++D DNSG+L+ +E L +L V++ + D DGNG +D+ E
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKE 59
Query: 250 FRTAMTQ----RHKLERFEISLQSHPVDELG-----------KAFKDDGMGDDATIATIK 294
F ++Q K ++ + + + +D+ G K + + D +
Sbjct: 60 FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 119
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
+ + D+D DGRIS++EF +++
Sbjct: 120 KTIINADKDGDGRISFEEFCAVV 142
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
LG +HRDL N L +D N V +DFGLS +E+ Y APE +
Sbjct: 170 LGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++++ +D+WS V+++ +L G P W T + V ++ +G
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQ--S 108
++HRD++PEN L + ++ V+ DFG + V+ +EV + +Y APE+L
Sbjct: 145 IIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 109 YGKEADIWSAEVILYILLCGVP 130
YGK D+W+ ++ + G P
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEP 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L FGL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L ++F ++D DNSG+L+ +E L +L V++ + D DGNG +D+ E
Sbjct: 5 EIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFKE 60
Query: 250 FRTAMTQ----RHKLERFEISLQSHPVDELG-----------KAFKDDGMGDDATIATIK 294
F ++Q K ++ + + + +D+ G K + + D +
Sbjct: 61 FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 120
Query: 295 EIMSEDDRDKDGRISYDEFRSMM 317
+ + D+D DGRIS++EF +++
Sbjct: 121 KTIINADKDGDGRISFEEFCAVV 143
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV--------GSPYYIAPEVL---WQ 107
++HRD++ +N L + + VL +DFG S + + G+ Y+APE++ +
Sbjct: 129 IVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAIL 145
YGK ADIWS + + G PP + E G QA +
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAM 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 146 NVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+L+E F D + +G ++ D +RE LA+L TL+ D+ + D DG+GT+D+ EF
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 252 TAMT 255
MT
Sbjct: 151 GVMT 154
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 190 EIQKLKEKFTEMDT-DNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYI 248
+++ L+ F + +T + SG ++ D++ L LG T+ ++Q + D GNG ID+
Sbjct: 11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFD 70
Query: 249 EFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDAT------IATIKEIMS---- 298
F+ + R E + E + + +G G +T +A + E +S
Sbjct: 71 SFKI-IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 299 -----EDDRDKDGRISYDEFRSMMKRGTQ 322
E D D G + ++EF +M G +
Sbjct: 130 DAMIDEIDADGSGTVDFEEFMGVMTGGDE 158
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGS-PYY------------IAPE 103
+ +HRDL N L S N V +DFGLS F+EE S P Y APE
Sbjct: 135 MSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 104 VL-WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISS 161
+ ++ + +D WS ++++ ++ G P W + Q V AI E +++ P P +
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPT 248
Query: 162 SAIELV 167
S +L+
Sbjct: 249 SLHQLM 254
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAK-LGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+++L++ F E DT+ G ++ ELRE + K LG + D+++ ++ D++G+G +D+ E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 250 FRTAMTQ 256
F M++
Sbjct: 66 FVRMMSR 72
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 164 NVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S +A L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLCG 128
+ DIWS VI+ ++ G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 23/93 (24%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------------------VGSPYY 99
V+HRDL+P N L S N L DFGL+ I+E V + +Y
Sbjct: 132 NVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 100 IAPEVLWQS--YGKEADIWSAEVILYILLCGVP 130
APEV+ S Y + D+WS IL L P
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS IE+ Y APE +
Sbjct: 164 MGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++++ ++ G P W + Q V +AI +G
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 23/93 (24%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------------------VGSPYY 99
V+HRDL+P N L S N L DFGL+ I+E V + +Y
Sbjct: 132 NVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 100 IAPEVLWQS--YGKEADIWSAEVILYILLCGVP 130
APEV+ S Y + D+WS IL L P
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S +A L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLCG 128
+ DIWS VI+ ++ G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
++ L+ F D D G +T DELR +A LG L + ++ ++ AD+D +G ++Y EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 251 RTAMTQ 256
+ Q
Sbjct: 65 ARMLAQ 70
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 272 VDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
VDEL +A G+G + ++ E D D+DGR++Y+EF M+
Sbjct: 25 VDELRRAMA--GLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------------------VGSPYY 99
V+HRDL+P N L S N L DFGL+ I+E V + +Y
Sbjct: 132 NVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 100 IAPEVLWQS--YGKEADIWSAEVIL 122
APEV+ S Y + D+WS IL
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL------SVFIE-EVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL S +E EV + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLC 127
+ D+WS I+ ++C
Sbjct: 203 KENVDLWSVGCIMGEMVC 220
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L+E F E D D G + +L + +G TE ++ + Q +++ G +D+ +
Sbjct: 23 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 82
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIAT----------------- 292
F M + E ++ V EL AF++ D I+T
Sbjct: 83 FVELMGPKLLAETADMI----GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 293 --IKEIMSEDDRDKDGRISYDEFRSMMKR 319
I+EI+ + D + DGR+ ++EF MM R
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L D GL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 149 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPY---YIAPEVL 105
LG +HRDL N L +D N V +DFGLS +E+ G + APE +
Sbjct: 170 LGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++++ +D+WS V+++ +L G P W T + V ++ +G
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+L+E F D + +G ++ D +RE LA+L TL+ D+ + D DG+GT+D+ EF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 252 TAMT 255
MT
Sbjct: 63 GVMT 66
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLW-QSYG 110
+++RDL+PEN L +D++ + +D GL+V + E VG+ Y+APEV+ + Y
Sbjct: 307 IVYRDLKPENIL---LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 111 KEADIWSAEVILYILLCGVPPI 132
D W+ +LY ++ G P
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPF 385
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 164 NVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPEVLW-QSYG 110
+++RDL+PEN L +D++ + +D GL+V + E VG+ Y+APEV+ + Y
Sbjct: 307 IVYRDLKPENIL---LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 111 KEADIWSAEVILYILLCGVPPI 132
D W+ +LY ++ G P
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPF 385
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + EV + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L DF L+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E+ + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 141 IHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 198 SKADIWSLGITAIELARGEPP 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L D GL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 142 IHRDIKAANVL---LSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 199 SKADIWSLGITAIELAKGEPP 219
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 152 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 144 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D +G ++ +LR + LG LT+ +V + ++ ADIDG+G ++Y +F
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 252 TAMTQR 257
MT +
Sbjct: 67 QMMTAK 72
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 224 TLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDG 283
T +E ++++ + D DGNG I + R MT
Sbjct: 3 TDSEEEIREAFRVFDKDGNGYISAADLRHVMTN--------------------------- 35
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+G+ T + E++ E D D DG+++Y++F MM
Sbjct: 36 LGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMM 69
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 144 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 146 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 146 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 142 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 142 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLN---ANDFGLSV--FIEEVGSPYYIAPEVLWQS--YGK 111
V+HRDL+P+N L E + + A FG+ V + EV + +Y AP+VL S Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 112 EADIWSAEVILYILLCGVP 130
DIWS I ++ G P
Sbjct: 181 TIDIWSVGCIFAEMVNGTP 199
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 149 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 150 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 141 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-EVGSPYY------------IAPE 103
+ +HRDL N L S N V +DFGLS F+E + P Y APE
Sbjct: 154 MNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 104 VL-WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAI 144
+ ++ + +D+WS ++++ ++ G P W T Q V AI
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 164 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L+E F E D D G + +L + +G TE ++ + Q +++ G +D+ +
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIAT----------------- 292
F M + E ++ V EL AF++ D I+T
Sbjct: 69 FVELMGPKLLAETADMI----GVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 293 --IKEIMSEDDRDKDGRISYDEFRSMMKR 319
I+EI+ + D + DGR+ ++EF MM R
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E+ + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 126 IHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 183 SKADIWSLGITAIELARGEPP 203
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVL--WQSYGK 111
++HRDL+P N +++E+ L D GL+ ++ V + +Y APE++ W Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E+ + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 146 IHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 203 SKADIWSLGITAIELARGEPP 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIEEVGSPYYIAPEVLW 106
V+HRDL+P N L + + L DFGL+ E V + +Y APE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 107 QS--YGKEADIWSAEVILYILLCGVP 130
S Y K DIWS IL +L P
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLN---ANDFGLSV--FIEEVGSPYYIAPEVLWQS--YGK 111
V+HRDL+P+N L E + + A FG+ V + EV + +Y AP+VL S Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 112 EADIWSAEVILYILLCGVP 130
DIWS I ++ G P
Sbjct: 181 TIDIWSVGCIFAEMVNGAP 199
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E+ + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 126 IHRDIKAANVL---LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 183 SKADIWSLGITAIELARGEPP 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS-YG 110
++HRDL+PEN L TS + DFGL+ V + +Y APEVL QS Y
Sbjct: 133 IVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYA 189
Query: 111 KEADIWSAEVILY------ILLCG 128
D+WS I L CG
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L+E F E D D G + +L + +G TE ++ + Q +++ G +D+ +
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIAT----------------- 292
F M + E ++ V EL AF++ D I+T
Sbjct: 69 FVELMGPKLLAETADMI----GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 293 --IKEIMSEDDRDKDGRISYDEFRSMMKR 319
I+EI+ + D + DGR+ ++EF MM R
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-----VGSPYYIAPEVLWQS--YGK 111
++HRDL+P N +++E+ L DFGL+ ++ V + +Y APE++ + Y +
Sbjct: 146 IIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 112 EADIWSAEVILYILLCG 128
DIWS I+ LL G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS-YG 110
++HRDL+PEN L TS + DFGL+ V + +Y APEVL QS Y
Sbjct: 141 IVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYA 197
Query: 111 KEADIWSAEVILY------ILLCG 128
D+WS I L CG
Sbjct: 198 TPVDMWSVGCIFAEMFRRKPLFCG 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQ-SYG 110
V+HRDL+P+N L TS + + DFGL+ V + +Y APEVL Q SY
Sbjct: 141 VVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 111 KEADIWSAEVIL 122
D+WS I
Sbjct: 198 TPVDLWSVGCIF 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGS------------PY-YIAPE 103
+ +HRDL N L S N V +DFGLS F+EE S P + APE
Sbjct: 137 MSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 104 VL-WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISS 161
+ ++ + +D WS ++++ ++ G P W + Q V AI E +++ P P +
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPT 250
Query: 162 SAIELV 167
S +L+
Sbjct: 251 SLHQLM 256
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQ-SYG 110
V+HRDL+P+N L TS + + DFGL+ V + +Y APEVL Q SY
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 111 KEADIWSAEVIL 122
D+WS I
Sbjct: 198 TPVDLWSVGCIF 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 59 VMHRDLRPENFLFTSMDENAVLN---ANDFGLSV--FIEEVGSPYYIAPEVLWQS--YGK 111
V+HRDL+P+N L E + + A FG+ V + E+ + +Y AP+VL S Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 112 EADIWSAEVILYILLCGVP 130
DIWS I ++ G P
Sbjct: 181 TIDIWSVGCIFAEMVNGTP 199
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y APE +
Sbjct: 143 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++++ ++ G P W T Q V +A+ +G
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQ-SYG 110
V+HRDL+P+N L TS + + DFGL+ V + +Y APEVL Q SY
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 111 KEADIWSAEVIL 122
D+WS I
Sbjct: 198 TPVDLWSVGCIF 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLS-----VFIEEVGSPYYIAPEVLW---QS 108
++HRDLR N S+DENA + A DFG S +G+ ++APE + +S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 109 YGKEADIWSAEVILYILLCGVPP 131
Y ++AD +S +ILY +L G P
Sbjct: 205 YTEKADTYSFAMILYTILTGEGP 227
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I + K+ F + D + +G + EL + LG TE +++ + A+ + NG +++ E
Sbjct: 8 QIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
Query: 250 FRTAMTQRHKLERFEISLQSHPVDELGKAFK-----DDG-------------MGDDATIA 291
F M ++ + ++ +E+ +AFK DG +G+ T
Sbjct: 68 FCGIMAKQMR--------ETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDE 119
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMMKR 319
I E++ E D D DG I+Y+EF M+ +
Sbjct: 120 EIDEMIREADFDGDGMINYEEFVWMISQ 147
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++++E F D D G ++ ELR + LG +T+ ++ + ++ AD DG+G I+Y EF
Sbjct: 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
Query: 252 TAMTQR 257
++Q+
Sbjct: 143 WMISQK 148
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS-YG 110
++HRDL+PEN L TS + DFGL+ V + +Y APEVL QS Y
Sbjct: 133 IVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYA 189
Query: 111 KEADIWSAEVILY------ILLCG 128
D+WS I L CG
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 134 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 188
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 238
Query: 167 VRRMLT 172
+R L
Sbjct: 239 IRWCLA 244
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 135 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 189
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 239
Query: 167 VRRMLT 172
+R L
Sbjct: 240 IRWCLA 245
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 134 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 188
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 238
Query: 167 VRRMLT 172
+R L
Sbjct: 239 IRWCLA 244
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 135 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 189
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 239
Query: 167 VRRMLT 172
+R L
Sbjct: 240 IRWCLA 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 162 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 216
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 266
Query: 167 VRRMLT 172
+R L
Sbjct: 267 IRWCLA 272
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 150 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 204
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 254
Query: 167 VRRMLT 172
+R L
Sbjct: 255 IRWCLA 260
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 24/90 (26%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE--------------------EVGSP 97
G+MHRDL+P N FT MD+ V+ DFGL ++ +VG+
Sbjct: 138 GLMHRDLKPSNIFFT-MDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK 194
Query: 98 YYIAPE-VLWQSYGKEADIWSAEVILYILL 126
Y++PE + SY + DI+S +IL+ LL
Sbjct: 195 LYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS-- 108
V+HRDL+P+N L ++E L DFGL+ + EV + +Y P++L S
Sbjct: 121 VLHRDLKPQNLL---INERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 109 YGKEADIWSAEVILYILLCGVP 130
Y + D+W I Y + G P
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRP 199
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 177 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 231
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 281
Query: 167 VRRMLT 172
+R L
Sbjct: 282 IRWCLA 287
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 149 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 203
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 253
Query: 167 VRRMLT 172
+R L
Sbjct: 254 IRWCLA 259
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 133 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 187
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 237
Query: 167 VRRMLT 172
+R L
Sbjct: 238 IRWCLA 243
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 135 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 189
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 239
Query: 167 VRRMLT 172
+R L
Sbjct: 240 IRWCLA 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
I+ + E F ++DT+++G+L++ E+ LA +G + ++D+ + +QA DI+ G I Y E
Sbjct: 37 HIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTE 94
Query: 250 FRTAMTQRHKLE 261
F + +E
Sbjct: 95 FMAGCYRWKNIE 106
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 169 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 223
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 273
Query: 167 VRRMLT 172
+R L
Sbjct: 274 IRWCLA 279
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 164 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 177 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 231
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 281
Query: 167 VRRMLT 172
+R L
Sbjct: 282 IRWCLA 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN--DFGLS-----VFIEEVGSPYYIAPEVLW---QS 108
++HRDLR N S+DENA + A DF LS +G+ ++APE + +S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 109 YGKEADIWSAEVILYILLCGVPP 131
Y ++AD +S +ILY +L G P
Sbjct: 205 YTEKADTYSFAMILYTILTGEGP 227
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 130 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 184
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +SS L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 234
Query: 167 VRRMLT 172
+R L
Sbjct: 235 IRWCLA 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 166 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 137 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 137 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------------VGSPYYIAPEV 104
G +HRD++ N L + E+ + DFG+S F+ VG+P ++APEV
Sbjct: 141 GQIHRDVKAGNIL---LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 105 LWQ--SYGKEADIWSAEVILYILLCGVPP 131
+ Q Y +ADIWS + L G P
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S +A L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLCG 128
+ DIWS I+ ++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S +A L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLE----- 261
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKT 93
Query: 262 RFEISLQSHPVDELGKAFKD--------DGMGDDATIATIKEIMSEDDRDKDGRISYDEF 313
E+S D+ + D G+ T I+E+M + D++ DGRI YDEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 314 RSMMK 318
MK
Sbjct: 154 LEFMK 158
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S +A L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVF-------IEEVGSPYYIAPEVLW--Q 107
+G+ HRD++P+N L + VL DFG + + + S YY APE+++
Sbjct: 160 IGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGAT 217
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAI 144
+Y DIWS ++ L+ G P E G+ Q +
Sbjct: 218 NYTTNIDIWSTGCVMAELMQGQP--LFPGESGIDQLV 252
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+G +HRDL N L S N V +DFGLS +E+ Y +PE +
Sbjct: 154 MGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++L+ ++ G P W + Q V +A+ +G
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEIS 266
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS---- 89
Query: 267 LQSHPVDELGKAFK-----DDG-------------MGDDATIATIKEIMSEDDRDKDGRI 308
+ +EL F+ DG G+ T I+E+M + D++ DGRI
Sbjct: 90 -KGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 309 SYDEFRSMMK 318
YDEF MK
Sbjct: 149 DYDEFLEFMK 158
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + DEL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEIS 266
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS---- 89
Query: 267 LQSHPVDELGKAFK-----DDG-------------MGDDATIATIKEIMSEDDRDKDGRI 308
+ +EL F+ DG G+ T I+E+M + D++ DGRI
Sbjct: 90 -KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 309 SYDEFRSMMK 318
YDEF MK
Sbjct: 149 DYDEFLEFMK 158
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + + V + YY APEV L Y
Sbjct: 148 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 205 KENVDIWSVGCIM 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 151 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 110 GKEADIWSAEVILYILLC 127
+ D+WS I+ ++C
Sbjct: 208 KENVDLWSVGCIMGEMVC 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 41/153 (26%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFI-----------EEVGSPYYIAPEVLW- 106
V+HRDL+P N + E+ VL DFGL+ + E + + +Y +P +L
Sbjct: 141 VLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
Query: 107 -QSYGKEADIWSAEVILYILLCG-------------------VPPIWAETEQGVAQAI-- 144
+Y K D+W+A I +L G +P + E Q + I
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258
Query: 145 -LKGEINFQHDP----FPSISSSAIELVRRMLT 172
++ ++ H P P IS A++ + ++LT
Sbjct: 259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILT 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------------VGSPYYIAPEV 104
G +HRD++ N L + E+ + DFG+S F+ VG+P ++APEV
Sbjct: 136 GQIHRDVKAGNIL---LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 105 LWQ--SYGKEADIWSAEVILYILLCGVPP 131
+ Q Y +ADIWS + L G P
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 140 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 110 GKEADIWSAEVILYILLC 127
+ D+WS I+ ++C
Sbjct: 197 KENVDLWSVGCIMGEMVC 214
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEIS 266
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS---- 89
Query: 267 LQSHPVDELGKAFK-----DDG-------------MGDDATIATIKEIMSEDDRDKDGRI 308
+ +EL F+ DG G+ T I+E+M + D++ DGRI
Sbjct: 90 -KGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 309 SYDEFRSMMK 318
YDEF MK
Sbjct: 149 DYDEFLEFMK 158
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + DEL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 95 EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQ------RHKL 260
G ++ EL + + LG T ++++ + D DG+GT+D+ EF M + + K
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKT 93
Query: 261 ERFEISLQSHPVDELGKAFKD--------DGMGDDATIATIKEIMSEDDRDKDGRISYDE 312
E E+S D+ + D G+ T I+E+M + D++ DGRI YDE
Sbjct: 94 EE-ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 313 FRSMMK 318
F MK
Sbjct: 153 FLEFMK 158
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS-YG 110
++HRDL+PEN L TS + DFGL+ V + +Y APEVL QS Y
Sbjct: 133 IVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYA 189
Query: 111 KEADIWSAEVILY------ILLCG 128
D+WS I L CG
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 56 LLGVMHRDLRPENFLFTSMDENA-----VLNANDFGL------SVFIEEVGSPYYIAPEV 104
++ ++HRDL+ N L EN +L DFGL + + G+ ++APEV
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 105 LWQS-YGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPS 158
+ S + K +D+WS V+L+ LL G P VA + ++ P PS
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL---PIPS 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVLWQ--SY 109
+ HRD++P N L MD+N + +DFG S ++ + G+ ++ PE SY
Sbjct: 172 NICHRDVKPSNIL---MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSY 228
Query: 110 -GKEADIWSAEVILYILLCGVPP 131
G + DIWS + LY++ V P
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVP 251
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y+APE L + Y
Sbjct: 136 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSV 192
Query: 112 EADIWSAEVILYILLCG----VPPIWAETEQGVAQAILKGEINFQH 153
++DIWS + L L G PP E E + ++ GE H
Sbjct: 193 QSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 238
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLW--Q 107
+ V HRD++P N L D L DFG + + + S YY APE+++ Q
Sbjct: 150 VNVCHRDIKPHNVLVNEAD--GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQ 207
Query: 108 SYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILK 146
Y DIWS I ++ G P + G I++
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQS-YG 110
+HRD++ N L + E + DFG++ + + VG+P+++APEV+ QS Y
Sbjct: 138 IHRDIKAANVL---LSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 111 KEADIWSAEVILYILLCGVPP 131
+ADIWS + L G PP
Sbjct: 195 FKADIWSLGITAIELAKGEPP 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 34/104 (32%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------------------------- 88
G++HRD++P N L ++ + DFGLS
Sbjct: 129 GLLHRDMKPSNIL---LNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 89 VFIEEVGSPYYIAPEVLWQS--YGKEADIWSAEVILYILLCGVP 130
+ + V + +Y APE+L S Y K D+WS IL +LCG P
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 57/184 (30%)
Query: 1 NSTGLQFACKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYED--DQF---- 54
N T +A K ++K+K V+ E +V +E+ +MQ L P +V +++D D F
Sbjct: 37 NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVD 95
Query: 55 VLLG------------------------------------VMHRDLRPENFLFTSMDENA 78
+LLG ++HRD++P+N L +DE+
Sbjct: 96 LLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNIL---LDEHG 152
Query: 79 VLNANDFGLSVFIEE-------VGSPYYIAPEVLWQ----SYGKEADIWSAEVILYILLC 127
++ DF ++ + G+ Y+APE+ Y D WS V Y LL
Sbjct: 153 HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 128 GVPP 131
G P
Sbjct: 213 GRRP 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 184 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 241 KENVDIWSVGCIM 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 162 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 216
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +SS L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 266
Query: 167 VRRMLT 172
+R L
Sbjct: 267 IRWCLA 272
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLWQS- 108
V+HRDL+P+N L ++ N L DFGL+ + EV + +Y P+VL+ +
Sbjct: 121 NVLHRDLKPQNLL---INRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 109 -YGKEADIWSAEVILYILLCGVPPIWA 134
Y D+WSA I L P++
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 163 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 217
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +SS L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 267
Query: 167 VRRMLT 172
+R L
Sbjct: 268 IRWCLA 273
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 130 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 184
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +SS L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 234
Query: 167 VRRMLT 172
+R L
Sbjct: 235 IRWCLA 240
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 147 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 204 KENVDIWSVGCIM 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVILYILLCGV 129
DIWS I+ L+ G
Sbjct: 203 AANVDIWSVGCIMGELVKGC 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 147 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 204 KENVDIWSVGCIM 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 184 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 241 KENVDIWSVGCIM 253
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 145 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 202 KENVDIWSVGCIM 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 147 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 204 KENVDIWSVGCIM 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 163 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 217
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +SS L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 267
Query: 167 VRRMLT 172
+R L
Sbjct: 268 IRWCLA 273
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 162 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 216
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +SS L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 266
Query: 167 VRRMLT 172
+R L
Sbjct: 267 IRWCLA 272
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+PEN L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 125 VLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 182 YSTAVDIWSLGCIF 195
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 139 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 196 KENVDIWSVGCIM 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+PEN L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 125 VLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 182 YSTAVDIWSLGCIF 195
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 140 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 197 KENVDIWSVGCIM 209
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 140 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 197 KENVDIWSVGCIM 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+PEN L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+PEN L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 126 VLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 183 YSTAVDIWSLGCIF 196
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK------- 259
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 260 -------LERFEISLQSH-PVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYD 311
F+ + + +DEL + G+ T I+E+M + D++ DGRI YD
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 312 EFRSMMK 318
E+ MK
Sbjct: 152 EWLEFMK 158
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + DEL+ L G T+TE D+++ M+ D + +G IDY E+
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
Query: 252 TAM 254
M
Sbjct: 155 EFM 157
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+PEN L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 150 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 204
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 254
Query: 167 VRRMLT 172
+R L
Sbjct: 255 IRWCLA 260
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 149 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 203
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 253
Query: 167 VRRMLT 172
+R L
Sbjct: 254 IRWCLA 259
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 144 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGY 200
Query: 110 GKEADIWSAEVILYILLCG 128
+ DIWS I+ L+ G
Sbjct: 201 KENVDIWSVGCIMGELVKG 219
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 150 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 204
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 254
Query: 167 VRRMLT 172
+R L
Sbjct: 255 IRWCLA 260
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 182 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 236
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 286
Query: 167 VRRMLT 172
+R L
Sbjct: 287 IRWCLA 292
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 157 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 211
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 261
Query: 167 VRRMLT 172
+R L
Sbjct: 262 IRWCLA 267
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-EVGSPYY------------IAPE 103
+ +HR L N L S N V +DFGLS F+E + P Y APE
Sbjct: 128 MNYVHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 104 VL-WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAI 144
+ ++ + +D+WS ++++ ++ G P W T Q V AI
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQS- 108
LG+ HRD++P+N L S D L DFG + + + S +Y APE++ +
Sbjct: 160 LGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGAT 217
Query: 109 -YGKEADIWSAEVILYILLCGVPPIWAET 136
Y D+WS + L+ G P ET
Sbjct: 218 EYTPSIDLWSIGCVFGELILGKPLFSGET 246
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 177 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 231
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 281
Query: 167 VRRMLT 172
+R L
Sbjct: 282 IRWCLA 287
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 112 EADIWSAEVILYILLCG---VPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
++DIWS + L + G +PP A+ + AI + ++P P + S L
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 240
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 130 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 184
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I++G++ F+ +S L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 234
Query: 167 VRRMLT 172
+R L
Sbjct: 235 IRWCLA 240
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 24/90 (26%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE--------------------EVGSP 97
G+MHRDL+P N FT MD+ V+ DFGL ++ +VG+
Sbjct: 184 GLMHRDLKPSNIFFT-MDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTK 240
Query: 98 YYIAPE-VLWQSYGKEADIWSAEVILYILL 126
Y++PE + +Y + DI+S +IL+ LL
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I KE F D D G +T +EL + L TE +++ + D DGNGTI++ E
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 250 FRTAMTQRHK 259
F + M ++ K
Sbjct: 68 FLSLMAKKVK 77
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 27/91 (29%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDA 288
D K+ D DG+G I E T + SL +P +E
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIR----------SLDQNPTEE-------------- 46
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+++++SE D D +G I +DEF S+M +
Sbjct: 47 ---ELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGS-------PYYIAPEVLWQSYG 110
G++H D++P N + DFGL V + G+ P Y+APE+L SYG
Sbjct: 177 GLVHLDVKPANIF---LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYG 233
Query: 111 KEADIWSAEVILYILLCGVP-PIWAETEQGVAQAILKGEIN 150
AD++S + + + C + P E Q + Q L E
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFT 274
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 203 KENVDIWSVGCIM 215
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F D D +GT+ EL+ LG + ++K+ + D +G G ++ +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFL 90
Query: 252 TAMTQR--HKLERFEI--SLQSHPVDELGK-AFKD-----DGMGDDATIATIKEIMSEDD 301
T TQ+ K + EI + + DE GK +FK+ +G++ T ++E + E D
Sbjct: 91 TVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEAD 150
Query: 302 RDKDGRISYDEFRSMMKR 319
RD DG +S EF + K+
Sbjct: 151 RDGDGEVSEQEFLRIXKK 168
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVL---- 105
L ++HRD++P N L +D + + DFG+S + G Y+APE +
Sbjct: 145 LKIIHRDIKPSNIL---LDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 106 -WQSYGKEADIWSAEVILYILLCG-VP-PIWAETEQGVAQAILKGEINFQHDPFPSISSS 162
Q Y +D+WS + LY L G P P W + Q + + S S
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPS 261
Query: 163 AIELVRRMLTQ 173
I V LT+
Sbjct: 262 FINFVNLCLTK 272
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV----------GSPYYIAPEV--- 104
G++H+D++P N L T+ L + G++ + GSP + PE+
Sbjct: 129 GIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG 185
Query: 105 LWQSYGKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAI 164
L G + DIWSA V LY + G+ P + + + I KG D P +S
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS---- 241
Query: 165 ELVRRML 171
+L++ ML
Sbjct: 242 DLLKGML 248
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEV-LWQSY 109
G++HRDL+P N + S + L DFGL+ + V + YY APEV L Y
Sbjct: 139 GIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 110 GKEADIWSAEVIL 122
+ DIWS I+
Sbjct: 196 KENVDIWSVGCIM 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------VGSPYYIAPEVLWQSY 109
+HRD++ N L +DE +DFGL+ E+ VG+ Y+APE L
Sbjct: 155 IHRDIKSANIL---LDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEI 211
Query: 110 GKEADIWSAEVILYILLCGVPPI 132
++DI+S V+L ++ G+P +
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAV 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----------SVFIEEVGSPYYIAPEVL- 105
G+++RDL+ +N L +D + D+G+ S F G+P YIAPE+L
Sbjct: 173 GIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSTF---CGTPNYIAPEILR 226
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVAQAILKGEINFQHDPF 156
+ YG D W+ V+++ ++ G P TE + Q IL+ +I
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 283
Query: 157 PSISSSAIELVRRMLTQ 173
S+S A +++ L +
Sbjct: 284 -SLSVKAASVLKSFLNK 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------VGSPYYIAPEVLWQSY 109
+HRD++ N L +DE +DFGL+ E+ VG+ Y+APE L
Sbjct: 155 IHRDIKSANIL---LDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEI 211
Query: 110 GKEADIWSAEVILYILLCGVPPI 132
++DI+S V+L ++ G+P +
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAV 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 145 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 201
Query: 112 EADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
++DIWS + L + G PI + + +L +N +P P + S L
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN---EPPPKLPSGVFSL 253
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
E+++++E F D D +G ++ EL + LG E +++ +Q D+DG+G +D+ E
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 250 FRTAM 254
F T +
Sbjct: 94 FVTLL 98
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 125 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 182 YSTAVDIWSLGCIF 195
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------VGSPYYIAPEVLWQSY 109
+HRD++ N L +DE +DFGL+ E+ VG+ Y+APE L
Sbjct: 149 IHRDIKSANIL---LDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEI 205
Query: 110 GKEADIWSAEVILYILLCGVPPI 132
++DI+S V+L ++ G+P +
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAV 228
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 232 QYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIA 291
Y + D DGN +D +E TA+T HK E E + P+ M +D I
Sbjct: 22 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA----PL-----------MSEDELIN 66
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMMK 318
I ++ +DD++ DG I Y EF ++
Sbjct: 67 IIDGVLRDDDKNNDGYIDYAEFAKSLQ 93
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLW--QS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q++ E F+ D +N G L Y EL+ + LG L + ++ + D +G + Y +F
Sbjct: 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 252 TAMTQRHKLERFEISLQSHPVDELGKAFK--DDG----------------MGDDATIATI 293
M ++ L+ P+DE+ +AF+ DD +G+ T +
Sbjct: 83 IVMGEK--------ILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
Query: 294 KEIMSEDDRDKDGRISYDEF 313
+ ++ E D D DG I+ +EF
Sbjct: 135 RAMIEEFDLDGDGEINENEF 154
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+ ++K F D D++G ++ LR +LG TLT+ +++ ++ D+DG+G I+ EF
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
Query: 251 RTAMT 255
T
Sbjct: 155 IAICT 159
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 232 QYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIA 291
Y + D DGN +D +E TA+T HK E E + P+ M +D I
Sbjct: 53 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA----PL-----------MSEDELIN 97
Query: 292 TIKEIMSEDDRDKDGRISYDEFRSMMK 318
I ++ +DD++ DG I Y EF ++
Sbjct: 98 IIDGVLRDDDKNNDGYIDYAEFAKSLQ 124
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 125 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 182 YSTAVDIWSLGCIF 195
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 128 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 185 YSTAVDIWSLGCIF 198
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----------SVFIEEVGSPYYIAPEVL- 105
G+++RDL+ +N L +D + D+G+ S F G+P YIAPE+L
Sbjct: 141 GIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILR 194
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVAQAILKGEINFQHDPF 156
+ YG D W+ V+++ ++ G P TE + Q IL+ +I
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 251
Query: 157 PSISSSAIELVRRMLTQ 173
S+S A +++ L +
Sbjct: 252 -SMSVKAASVLKSFLNK 267
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+I KE F D D G +T +EL + L TE +++ + D DGNGTI++ E
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 250 FRTAMTQR 257
F + M ++
Sbjct: 68 FLSLMAKK 75
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 27/91 (29%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDA 288
D K+ D DG+G I E T + SL +P +E
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIR----------SLDQNPTEE-------------- 46
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+++++SE D D +G I +DEF S+M +
Sbjct: 47 ---ELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 128 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 185 YSTAVDIWSLGCIF 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 131 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 188 YSTAVDIWSLGCIF 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----------SVFIEEVGSPYYIAPEVL- 105
G+++RDL+ +N L +D + D+G+ S F G+P YIAPE+L
Sbjct: 126 GIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILR 179
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVAQAILKGEINFQHDPF 156
+ YG D W+ V+++ ++ G P TE + Q IL+ +I
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 236
Query: 157 PSISSSAIELVRRMLTQ 173
S+S A +++ L +
Sbjct: 237 -SLSVKAASVLKSFLNK 252
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 180 YSTAVDIWSLGCIF 193
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 125 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 182 YSTAVDIWSLGCIF 195
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 124 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 181 YSTAVDIWSLGCIF 194
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 126 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 183 YSTAVDIWSLGCIF 196
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGL-----------SVFIEEVGSPYYIAPEVL- 105
G+++RDL+ +N L +D + D+G+ S F G+P YIAPE+L
Sbjct: 130 GIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILR 183
Query: 106 WQSYGKEADIWSAEVILYILLCGVPPI---------WAETEQGVAQAILKGEINFQHDPF 156
+ YG D W+ V+++ ++ G P TE + Q IL+ +I
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 240
Query: 157 PSISSSAIELVRRMLTQ 173
S+S A +++ L +
Sbjct: 241 -SLSVKAASVLKSFLNK 256
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 126 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 183 YSTAVDIWSLGCIF 196
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 126 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 183 YSTAVDIWSLGCIF 196
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 232 QYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDATIA 291
Y + D DGN +D +E TA+T HK E E + P+ M +D I
Sbjct: 72 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA----PL-----------MSEDELIN 116
Query: 292 TIKEIMSEDDRDKDGRISYDEF 313
I ++ +DD++ DG I Y EF
Sbjct: 117 IIDGVLRDDDKNNDGYIDYAEF 138
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVL--WQS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 184 YSTAVDIWSLGCIF 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS--------VFIEEVGSPYYIAPEVLW--QS 108
V+HRDL+P+N L ++ + DFGL+ + EV + +Y APE+L +
Sbjct: 131 VLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 109 YGKEADIWSAEVIL 122
Y DIWS I
Sbjct: 188 YSTAVDIWSLGCIF 201
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLN---ANDFGLSV--FIEEVGSPYYIAPEVLWQS--YG 110
V+HRDL+P+N L E + N A FG+ V + EV + +Y P+VL+ + Y
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 111 KEADIWSAEVIL 122
D+WSA I
Sbjct: 181 TSIDMWSAGCIF 192
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q++KE F DT+ +G++ Y EL+ + LG + + ++ + M D +GNG I + +F
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFL 66
Query: 252 TAMTQRHK 259
MT++ K
Sbjct: 67 DIMTEKIK 74
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 27/89 (30%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDA 288
++K+ D + G+IDY E + AM +G D
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMR---------------------------ALGFDV 40
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMM 317
I E+M+E DR+ +G I +D+F +M
Sbjct: 41 KKPEILELMNEYDREGNGYIGFDDFLDIM 69
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N L E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK------- 259
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 260 -------LERFEISLQSH-PVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYD 311
F+ + + +DEL + G+ T I+E+M + D++ DGRI YD
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 312 EFRSMMK 318
E MK
Sbjct: 152 EXLEFMK 158
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
++L + F D + G + DEL+ L G T+TE D+++ M+ D + +G IDY E
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 163 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 217
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +S L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHL 267
Query: 167 VRRMLT 172
+R L
Sbjct: 268 IRWCLA 273
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 162 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 216
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +S L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHL 266
Query: 167 VRRMLT 172
+R L
Sbjct: 267 IRWCLA 272
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 58 GVMHRDLRPENFLFTSMDEN-AVLNANDFGLSVFIEEV------GSPYYIAPEVLWQSY- 109
GV+HRD++ EN L +D N L DFG +++ G+ Y PE W Y
Sbjct: 163 GVLHRDIKDENIL---IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--WIRYH 217
Query: 110 ---GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIEL 166
G+ A +WS ++LY ++CG P + E I+ G++ F+ +S L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHL 267
Query: 167 VRRMLT 172
+R L
Sbjct: 268 IRWCLA 273
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 43/137 (31%)
Query: 45 FKAAYEDDQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLS-----------VFIE- 92
FKA QF G++HRD++P NFL+ + L DFGL+ F++
Sbjct: 127 FKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQS 181
Query: 93 ------------------------EVGSPYYIAPEVLWQSYGKEA--DIWSAEVILYILL 126
G+P + APEVL + + D+WSA VI LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 127 CGVPPIWAETEQGVAQA 143
G P + ++ A A
Sbjct: 242 SGRYPFYKASDDLTALA 258
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------VGSPYYIAPEVLWQSY 109
+HRD++ N L +DE +DFGL+ E+ VG+ Y APE L
Sbjct: 146 IHRDIKSANIL---LDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI 202
Query: 110 GKEADIWSAEVILYILLCGVPPI 132
++DI+S V+L ++ G+P +
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAV 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 149 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 207 MYDYSLDMWSLGCML 221
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE---------VGSPYYIAPEVL-- 105
LG +HRD++P+N L +D + DFG + + VG+P Y++PE+L
Sbjct: 181 LGYVHRDIKPDNIL---LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 106 ------WQSYGKEADIWSAEVILYILLCGVPPIWAET 136
SYG E D W+ V Y + G P +A++
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 153 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 209
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPI 230
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 155 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 213 MYDYSLDMWSLGCML 227
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 148 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 206 MYDYSLDMWSLGCML 220
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 149 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 207 MYDYSLDMWSLGCML 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----FIEE----VGSPYYIAPEVLW---- 106
++HRDL+ N LFT +D + L DFG+S I+ +G+PY++APEV+
Sbjct: 156 IIHRDLKAGNILFT-LDGDIKLA--DFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
+ Y +AD+WS + L + PP
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQ 107
+G+MHRD++P N + E+ L D+GL+ F V S Y+ PE+L +Q
Sbjct: 150 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 108 SYGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 208 MYDYSLDMWSLGCML 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS------------VFIEEVGSPYYIAPEVL- 105
V+HRDL+P N L ++EN L DFG++ E V + +Y APE++
Sbjct: 179 VIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 106 -WQSYGKEADIWSAEVIL 122
Y + D+WS I
Sbjct: 236 SLHEYTQAIDLWSVGCIF 253
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----FIEE----VGSPYYIAPEVLW---- 106
++HRDL+ N LFT +D + L DFG+S I+ +G+PY++APEV+
Sbjct: 156 IIHRDLKAGNILFT-LDGDIKLA--DFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
+ Y +AD+WS + L + PP
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 188 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 244
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPI 265
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----FIEE----VGSPYYIAPEVLW---- 106
++HRDL+ N LFT +D + L DFG+S I+ +G+PY++APEV+
Sbjct: 156 IIHRDLKAGNILFT-LDGDIKLA--DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
+ Y +AD+WS + L + PP
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS------------VFIEEVGSPYYIAPEVL- 105
V+HRDL+P N L ++EN L DFG++ E V + +Y APE++
Sbjct: 180 VIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 106 -WQSYGKEADIWSAEVIL 122
Y + D+WS I
Sbjct: 237 SLHEYTQAIDLWSVGCIF 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY-----------IAPEVL 105
+ +HRDL N L S N V +DFGLS +E+ Y APE +
Sbjct: 166 MNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 106 -WQSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
++ + +D+WS ++++ ++ G P W + V +AI G
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
+++RDL+PEN L +D++ + +D GL+V ++ G+P ++APE+L + Y
Sbjct: 310 IIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQ 138
D ++ V LY ++ P A E+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 58 GVMHRDLRPENFLFTSMD--ENAV-LNANDFGLSVFIEE-----VGSPYYIAPEVLWQS- 108
G++H D++PEN L +D EN + + D G + + +E + + Y +PEVL +
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAP 211
Query: 109 YGKEADIWSAEVILYILLCG 128
+G ADIWS +++ L+ G
Sbjct: 212 WGCGADIWSTACLIFELITG 231
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSV-----FIEEVGSPYYIAPEVLW-QSYG 110
L ++H DL+PEN L + +A+ DFG S + + S +Y +PEVL Y
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 111 KEADIWSAEVILYILLCGVP 130
D+WS IL + G P
Sbjct: 218 LAIDMWSLGCILVEMHTGEP 237
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 58 GVMHRDLRPENFLFTSMD--ENAV-LNANDFGLSVFIEE-----VGSPYYIAPEVLWQS- 108
G++H D++PEN L +D EN + + D G + + +E + + Y +PEVL +
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAP 211
Query: 109 YGKEADIWSAEVILYILLCG 128
+G ADIWS +++ L+ G
Sbjct: 212 WGCGADIWSTACLIFELITG 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-VFIEE-----VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S I+E VG+ Y++PE L + Y
Sbjct: 129 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSV 185
Query: 112 EADIWSAEVILYILLCGVPP 131
++DIWS + L + G P
Sbjct: 186 QSDIWSMGLSLVEMAVGRYP 205
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
+++RDL+PEN L +D++ + +D GL+V ++ G+P ++APE+L + Y
Sbjct: 310 IIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQ 138
D ++ V LY ++ P A E+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
+++RDL+PEN L +D++ + +D GL+V ++ G+P ++APE+L + Y
Sbjct: 310 IIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQ 138
D ++ V LY ++ P A E+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLW-QSY 109
+++RDL+PEN L +D++ + +D GL+V ++ G+P ++APE+L + Y
Sbjct: 310 IIYRDLKPENVL---LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQ 138
D ++ V LY ++ P A E+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSV-----FIEEVGSPYYIAPEVLW-QSYG 110
L ++H DL+PEN L + +A+ DFG S + + S +Y +PEVL Y
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 111 KEADIWSAEVILYILLCGVP 130
D+WS IL + G P
Sbjct: 237 LAIDMWSLGCILVEMHTGEP 256
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI-------EEVGSPYYIAPEVL----- 105
GV+HRD++P N L +DE + DFG+S + G Y+APE +
Sbjct: 145 GVIHRDVKPSNIL---LDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 106 -WQSYGKEADIWSAEVILYILLCGVPP 131
Y AD+WS + L L G P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+++E F D D +GT+ EL+ + LG + ++K+ + D +G G +++ +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 252 TAMTQR 257
T MTQ+
Sbjct: 91 TVMTQK 96
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQS-YGK 111
+MHRD++P N L S E + DFG+S + + VG+ Y++PE L + Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 112 EADIWSAEVILYILLCGVPPI 132
++DIWS + L + G PI
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 18/88 (20%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-----VFIEE----VGSPYYIAPEVLW--- 106
++HRDL+ N LFT +D + L DFG+S I+ +G+PY++APEV+
Sbjct: 129 IIHRDLKAGNILFT-LDGDIKLA--DFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 107 ---QSYGKEADIWSAEVILYILLCGVPP 131
+ Y +AD+WS + L + PP
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV------GSPYYIAPEVL--WQSY 109
GV+HRD++ EN L A L DFG + + G+ Y PE + Q +
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLI--DFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 110 GKEADIWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINFQHDPFPSISSSAIELVRR 169
A +WS ++LY ++CG P + Q IL+ E++F +S L+RR
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPA----HVSPDCCALIRR 266
Query: 170 MLT 172
L
Sbjct: 267 CLA 269
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSV-----FIEEVGSPYYIAPEVLW-QSYG 110
L ++H DL+PEN L + A+ DFG S + + S +Y +PEVL Y
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAI-KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 111 KEADIWSAEVILYILLCGVP 130
D+WS IL + G P
Sbjct: 237 LAIDMWSLGCILVEMHTGEP 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----VGSPYYIAPEVLWQ----SYG 110
++HRD++ N L + E ++ DFG + + VG+PY++APEV+ Y
Sbjct: 175 MIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 111 KEADIWSAEVILYILLCGVPPIW 133
+ D+WS + L PP++
Sbjct: 232 GKVDVWSLGITCIELAERKPPLF 254
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+++ + F +D + +GT+ ELR+ L LG LT +V++ M+ + G+G I+Y F
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESF 134
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 57/166 (34%), Gaps = 62/166 (37%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLT--------------EFDVKQY----- 233
+++E F D DN G ++ +EL L LG T EFD+ +
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYR 65
Query: 234 ----------------MQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGK 277
+A D +GNGTI E R +
Sbjct: 66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLN--------------------- 104
Query: 278 AFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKRGTQL 323
+GD T + ++E+M E DG I+Y+ F M+ G L
Sbjct: 105 ------LGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYPL 144
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQ-SYG 110
++HRDL+PEN + + + D G + + E VG+ Y+APE+L Q Y
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 202
Query: 111 KEADIWSAEVILYILLCGVPP 131
D WS + + + G P
Sbjct: 203 VTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS-------VFIEEVGSPYYIAPEVLWQ-SYG 110
++HRDL+PEN + + + D G + + E VG+ Y+APE+L Q Y
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 201
Query: 111 KEADIWSAEVILYILLCGVPP 131
D WS + + + G P
Sbjct: 202 VTVDYWSFGTLAFECITGFRP 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----VGSPYYIAPEVLWQ----SYG 110
++HRD++ N L + E ++ DFG + + VG+PY++APEV+ Y
Sbjct: 136 MIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 111 KEADIWSAEVILYILLCGVPPIW 133
+ D+WS + L PP++
Sbjct: 193 GKVDVWSLGITCIELAERKPPLF 215
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 92/238 (38%), Gaps = 90/238 (37%)
Query: 14 KRKLVKDYEKDD-VRREVAVMQYLSGQPNIVKFKAAY-----EDD----QFVLLG----- 58
KR L + EK+ + +EV M+ LSG PNIV+F +A E D +F+LL
Sbjct: 59 KRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG 118
Query: 59 ----------------------------------------VMHRDLRPENFLFTSMDENA 78
++HRDL+ EN L ++
Sbjct: 119 QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QG 175
Query: 79 VLNANDFGLSVFI-----------------EEVG---SPYYIAPEV--LWQSY--GKEAD 114
+ DFG + I EE+ +P Y PE+ L+ ++ G++ D
Sbjct: 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQD 235
Query: 115 IWSAEVILYILLCGVPPIWAETEQGVAQAILKGEINF-QHDPFPSISSSAIELVRRML 171
IW+ ILY+L P E G I+ G+ + HD ++ S L+R ML
Sbjct: 236 IWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPHDTQYTVFHS---LIRAML 286
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGS-TLTEFDVKQYMQAADIDGNGTIDYIEF 250
F D + G + +DE + + K+G LT+ +V++ M+ AD DGNG ID EF
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 22/87 (25%)
Query: 59 VMHRDLRPENFLFT------------SMDENAVLNAN----DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF S +E +V N + DFG + F E V +
Sbjct: 176 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR 235
Query: 98 YYIAPEVLWQ-SYGKEADIWSAEVILY 123
+Y PEV+ + + + D+WS IL+
Sbjct: 236 HYRPPEVILELGWAQPCDVWSIGCILF 262
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 22/87 (25%)
Query: 59 VMHRDLRPENFLFT------------SMDENAVLNAN----DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF S +E +V N + DFG + F E V +
Sbjct: 153 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR 212
Query: 98 YYIAPEVLWQ-SYGKEADIWSAEVILY 123
+Y PEV+ + + + D+WS IL+
Sbjct: 213 HYRPPEVILELGWAQPCDVWSIGCILF 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 9 CKSISKRKLVKDYEKDDVRREVAVMQYLSGQPNIVKFKAAYEDDQFVLLGVMHRDLRPEN 68
C+ +SK L+ D+ K ++ + + + Q + I A E +V HRDLR N
Sbjct: 91 CEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-----HRDLRAAN 144
Query: 69 FLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLWQSYGKEADIWSA 118
L + EN V DFGL+ IE+ G+ + + APE L+ + ++D+WS
Sbjct: 145 IL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 119 EVIL 122
++L
Sbjct: 202 GILL 205
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 22/87 (25%)
Query: 59 VMHRDLRPENFLFT------------SMDENAVLNAN----DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF S +E +V N + DFG + F E V +
Sbjct: 144 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR 203
Query: 98 YYIAPEVLWQ-SYGKEADIWSAEVILY 123
+Y PEV+ + + + D+WS IL+
Sbjct: 204 HYRPPEVILELGWAQPCDVWSIGCILF 230
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGS---TLTEFDVKQYMQAADIDGNGTIDYIE 249
+LKE F +D D SG + DEL+ L + S LT + K ++ AAD DG+G I E
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 250 FR 251
F+
Sbjct: 102 FQ 103
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGST---LTEFDVKQYMQAADIDGNGTIDYIE 249
++K+ F +D D SG L DEL+ L K S LTE + K M AAD DG+G I E
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 250 FR 251
F+
Sbjct: 102 FQ 103
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV------------FIEEVGSPYYIAPEVLW 106
++HRD++ N L T + VL DFGL+ + V + +Y PE+L
Sbjct: 146 ILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPIWAETEQ 138
+ YG D+W A I+ + P + TEQ
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + + L D+GL+ F V S Y+ PE+L +Q
Sbjct: 152 GIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 109 YGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 210 YDYSLDMWSLGCML 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-----EVGSPYYIAPEVLWQS-YGK 111
++HRDL+P N L + VL DFG + I+ GS ++APEV S Y +
Sbjct: 126 ALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 112 EADIWSAEVILY 123
+ D++S +IL+
Sbjct: 184 KCDVFSWGIILW 195
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + +EL+ + A G LT+ + K +++AAD DG+G I EF
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Query: 251 RT 252
T
Sbjct: 104 ET 105
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 24/89 (26%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLERFEISLQSHPVDELGKAFKDDGMGDDA 288
DVK+ +A D D +G I+ E + L+S D G D
Sbjct: 43 DVKKVFKAIDADASGFIEE-------------EELKFVLKSFAAD-----------GRDL 78
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMM 317
T A K + D+D DG+I DEF +++
Sbjct: 79 TDAETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 195 KEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAM 254
K F + D + G L+ DE RE T+ D+ ++ + D+DGNG ++ EF + +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 255 TQ 256
+
Sbjct: 64 EK 65
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPE-VLWQSYG 110
++HRDL+P N + + DFGL ++ G+ Y++PE + Q YG
Sbjct: 157 LIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYG 213
Query: 111 KEADIWSAEVILYILL 126
KE D+++ +IL LL
Sbjct: 214 KEVDLYALGLILAELL 229
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + + L D+GL+ F V S Y+ PE+L +Q
Sbjct: 157 GIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 109 YGKEADIWSAEVIL 122
Y D+WS +L
Sbjct: 215 YDYSLDMWSLGCML 228
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-----EVGSPYYIAPEVLWQS-YGK 111
++HRDL+P N L + VL DFG + I+ GS ++APEV S Y +
Sbjct: 125 ALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 112 EADIWSAEVILY 123
+ D++S +IL+
Sbjct: 183 KCDVFSWGIILW 194
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV------------FIEEVGSPYYIAPEVLW 106
++HRD++ N L T + VL DFGL+ + V + +Y PE+L
Sbjct: 145 ILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 201
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPIWAETEQ 138
+ YG D+W A I+ + P + TEQ
Sbjct: 202 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV------------FIEEVGSPYYIAPEVLW 106
++HRD++ N L T + VL DFGL+ + V + +Y PE+L
Sbjct: 146 ILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPIWAETEQ 138
+ YG D+W A I+ + P + TEQ
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV------------FIEEVGSPYYIAPEVLW 106
++HRD++ N L T + VL DFGL+ + V + +Y PE+L
Sbjct: 146 ILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 107 --QSYGKEADIWSAEVILYILLCGVPPIWAETEQ 138
+ YG D+W A I+ + P + TEQ
Sbjct: 203 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+ ++K F D D++G ++ LR +LG TLT+ +++ ++ D+DG+G I+ EF
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
Query: 251 RTAMT 255
T
Sbjct: 155 IAICT 159
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q++ E F+ D +N G L Y EL+ LG L + ++ + D +G Y +F
Sbjct: 23 QEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFY 82
Query: 252 TAMTQRHKLERFEISLQSHPVDELGKAFK--DDG----------------MGDDATIATI 293
++ L+ P+DE+ +AF+ DD +G+ T +
Sbjct: 83 IVXGEK--------ILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
Query: 294 KEIMSEDDRDKDGRISYDEF 313
+ + E D D DG I+ +EF
Sbjct: 135 RAXIEEFDLDGDGEINENEF 154
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL---- 105
L V+HRD++P N L ++ + + DFG+S ++ + G Y+APE +
Sbjct: 173 LSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL 229
Query: 106 -WQSYGKEADIWSAEVIL 122
+ Y ++DIWS + +
Sbjct: 230 NQKGYSVKSDIWSLGITM 247
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F D +++G ++ +LR L LG LT+ +V + ++ ++D NG IDY +F
Sbjct: 11 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI------------EEVGSPYYIAPEV 104
L V+HRD++P N L ++ + + DFG+S ++ + +P I PE+
Sbjct: 156 LSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPEL 212
Query: 105 LWQSYGKEADIWS 117
+ Y ++DIWS
Sbjct: 213 NQKGYSVKSDIWS 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVF-IEEVG-----------SPYYIAPEV 104
L V+HRD++P N L ++ + + DFG+S + +++V +P I PE+
Sbjct: 129 LSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 105 LWQSYGKEADIWSAEVIL 122
+ Y ++DIWS + +
Sbjct: 186 NQKGYSVKSDIWSLGITM 203
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F DT+ G ++ EL + L LGST + +V++ M D DG+G ID+ EF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 8 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
Query: 251 RTAMTQRHK 259
M ++ K
Sbjct: 68 LVMMVRQMK 76
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F DT+ G ++ EL + L LGST + +V++ M D DG+G ID+ EF
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + DEL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 252 TAM 254
M
Sbjct: 66 EFM 68
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 285 GDDATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
G+ T I+E+M + D++ DGRI YDEF MK
Sbjct: 36 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 69
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE--------VGSPYYIAPEVLWQ-SYG 110
+HRD++ N L + + +A L DFG++ + + +G+P+++APEV+ + Y
Sbjct: 147 IHRDIKAGNILLNT-EGHAKLA--DFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 111 KEADIWSAEVILYILLCGVPP 131
ADIWS + + G PP
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F D DNSGT+T +LR +LG LTE ++++ + AD + + ID EF
Sbjct: 15 FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 284 MGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
+G++ T ++E+++E DR+ D I DEF +MK+
Sbjct: 38 LGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ + D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHK 259
M ++ K
Sbjct: 79 LVMMVRQMK 87
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ EL + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHK 259
M ++ K
Sbjct: 79 LVMMVRQMK 87
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 22/92 (23%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNAN----------------DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF + D N DFG + F E V +
Sbjct: 158 LTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTR 217
Query: 98 YYIAPEVLWQ-SYGKEADIWSAEVILYILLCG 128
+Y APEV+ + + + D+WS I++ G
Sbjct: 218 HYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F D +++G ++ +LR L LG LT+ +V + ++ ++D NG IDY +F
Sbjct: 89 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 141
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 141 IIHRDLKSNNIF---LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 153 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 153 IIHRDLKSNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 23/90 (25%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV-----------FIEEVGSPYYIAPEVLW- 106
++HRDL+ N L T + + DFG+S FI G+PY++APEV+
Sbjct: 138 IIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMC 191
Query: 107 -----QSYGKEADIWSAEVILYILLCGVPP 131
Y +ADIWS + L + PP
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 152 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 141 IIHRDLKSNNIF---LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 145 IIHRDLKSNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 22/86 (25%)
Query: 59 VMHRDLRPENFLFT------------SMDENAVLNAN----DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF DE ++N + DFG + + +E V +
Sbjct: 139 LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTR 198
Query: 98 YYIAPEV-LWQSYGKEADIWSAEVIL 122
+Y APEV L + + D+WS IL
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCIL 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 23/90 (25%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV-----------FIEEVGSPYYIAPEVLW- 106
++HRDL+ N L T + + DFG+S FI G+PY++APEV+
Sbjct: 130 IIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMC 183
Query: 107 -----QSYGKEADIWSAEVILYILLCGVPP 131
Y +ADIWS + L + PP
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 129 IIHRDLKSNNIF---LHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGS---TLTEFDVKQYMQAADIDGNGTIDYIE 249
++K+ F +D D SG L +EL+ L K S LTE + K M AAD DG+G I E
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 250 FR 251
F+
Sbjct: 103 FQ 104
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 130 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 130 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 127 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 299 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 356 GRFTIKSDVWSFGILL 371
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIF---LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 299 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 356 GRFTIKSDVWSFGILL 371
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
++ F D + SG + D LRE L +G T+ +V + + A ID G +Y+EF
Sbjct: 78 IRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEF 134
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+IQ+ KE F +D + G + ++L + LA +G T+ +Y++ + G I++
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTD----EYLEGMMSEAPGPINFTM 60
Query: 250 FRTAMTQRHKLERFEISLQSH--PVDELGKAFKDDG--------MGDDATIATIKEIMSE 299
F T ++ E +++ DE F + MGD T + E+ E
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 300 DDRDKDGRISYDEFRSMMKRGTQ 322
DK G +Y EF ++K G +
Sbjct: 121 APIDKKGNFNYVEFTRILKHGAK 143
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 299 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 356 GRFTIKSDVWSFGILL 371
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 382 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 439 GRFTIKSDVWSFGILL 454
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSV----------FIEEVGSPYYIAPEVLW-- 106
++HRDL+ N + E+ + DFGL+ F + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
Y ++D+++ ++LY L+ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 24/122 (19%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
F E+D + G ++Y+E++ ++K + E ++ ++ D DGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA------ 59
Query: 258 HKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+F S+Q G+ DD +G + + ++M D D DG+++ +E S
Sbjct: 60 ----KFYGSIQ-------GQDLSDDKIG----LKVLYKLM---DVDGDGKLTKEEVTSFF 101
Query: 318 KR 319
K+
Sbjct: 102 KK 103
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 24/122 (19%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
F E+D + G ++Y+E++ ++K + E ++ ++ D DGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA------ 59
Query: 258 HKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMM 317
+F S+Q G+ DD +G + + ++M D D DG+++ +E S
Sbjct: 60 ----KFYGSIQ-------GQDLSDDKIG----LKVLYKLM---DVDGDGKLTKEEVTSFF 101
Query: 318 KR 319
K+
Sbjct: 102 KK 103
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 128 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPY----------YIAPEVLWQ 107
++HRD++ N L +DEN V DFG+S E+G + YI PE +
Sbjct: 159 AIIHRDVKSINIL---LDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 108 SYGKE-ADIWSAEVILYILLCG 128
E +D++S V+L+ +LC
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCA 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPY------------YIAPEVL- 105
+HRDL N L T E VL +DFG+S EE Y + APE L
Sbjct: 234 CIHRDLAARNCLVT---EKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 106 WQSYGKEADIWSAEVILY 123
+ Y E+D+WS ++L+
Sbjct: 289 YGRYSSESDVWSFGILLW 306
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNA--NDFGLS--------VFIEEVGSP---YYIAPE 103
L ++HRDL+P N L + + + + A +DFGL F G P +IAPE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 104 VLWQSYGKE----ADIWSAEVILYILL 126
+L + + DI+SA + Y ++
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 130 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 187 GRFTIKSDVWSFGILL 202
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 146 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 204 YDYSLDMWS 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLA-KLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
+L++ E+D D +GT+ + E +A K+ T +E ++++ + D DGNG I E R
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 252 TAMTQ 256
MT
Sbjct: 62 HVMTN 66
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 229 DVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
+++ + D DGNGTID+ EF T M ++ K
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMK 32
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 146 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 204 YDYSLDMWS 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 126 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 183 GRFTIKSDVWSFGILL 198
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 123 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 180 GRFTIKSDVWSFGILL 195
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 252 TAM 254
M
Sbjct: 65 EFM 67
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 285 GDDATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
G+ T I+E+M + D++ DGRI YDEF MK
Sbjct: 35 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 68
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 130 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 187 GRFTIKSDVWSFGILL 202
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL IE+ G+ + + APE L+
Sbjct: 300 MNYVHRDLRAANIL---VGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY 356
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 357 GRFTIKSDVWSFGILL 372
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 124 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 181 GRFTIKSDVWSFGILL 196
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 166 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 224 YDYSLDMWS 232
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 147 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 205 YDYSLDMWS 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDLR N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 122 MNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 179 GRFTIKSDVWSFGILL 194
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-------EVGSPYYIAPEVL--WQS 108
G+MHRD++P N + E L D+GL+ F V S Y+ PE+L Q
Sbjct: 145 GIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 109 YGKEADIWS 117
Y D+WS
Sbjct: 203 YDYSLDMWS 211
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 285 GDDATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
G+ T I+E+M + D++ DGRI YDEF MK
Sbjct: 45 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLS--VFIEE---VGSPY-----YIAPE-VLWQS 108
+HRDL N L + EN ++ DFG+S V+ + VG ++ PE ++++
Sbjct: 150 VHRDLATRNCL---VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK 206
Query: 109 YGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKGEI 149
+ E+D+WS V+L+ I G P + + V + I +G +
Sbjct: 207 FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 252 TAM 254
M
Sbjct: 67 EFM 69
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 285 GDDATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
G+ T I+E+M + D++ DGRI YDEF MK
Sbjct: 37 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 70
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 127 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE-------VGSPYYIAPE-VLWQSYG 110
+++RDL+P N + + DFGL ++ G+ Y++PE + Q YG
Sbjct: 143 LINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYG 199
Query: 111 KEADIWSAEVILYILL 126
KE D+++ +IL LL
Sbjct: 200 KEVDLYALGLILAELL 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 59 VMHRDLRPENFLFT------------SMDENAVLNAN----DFGLSVFIEE-----VGSP 97
+ H DL+PEN LF DE ++N + DFG + + +E V
Sbjct: 139 LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXR 198
Query: 98 YYIAPEV-LWQSYGKEADIWSAEVIL 122
+Y APEV L + + D+WS IL
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCIL 224
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 26/96 (27%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSPYYIAPEVLW- 106
G++H DL+P NFL + +L DFG++ V +VG+ Y+ PE +
Sbjct: 131 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 107 QSYGKE-----------ADIWSAEVILYILLCGVPP 131
S +E +D+WS ILY + G P
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 35/101 (34%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFI---------------EEVG------- 95
G++HRDL+P N L ++++ + DFGL+ I EE G
Sbjct: 149 GIIHRDLKPANCL---LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 96 --------SPYYIAPE--VLWQSYGKEADIWSAEVILYILL 126
+ +Y APE +L ++Y K DIWS I LL
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L + F D + G + +EL+ L G T+TE D+++ M+ D + +G IDY EF
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 252 TAM 254
M
Sbjct: 70 EFM 72
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 285 GDDATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
G+ T I+E+M + D++ DGRI YDEF MK
Sbjct: 40 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 73
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 26/89 (29%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLS-VFIEE---------------------V 94
+ ++HRDL N L + EN + DFGL+ + ++E V
Sbjct: 127 MNIIHRDLNSHNCL---VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 95 GSPYYIAPEVL-WQSYGKEADIWSAEVIL 122
G+PY++APE++ +SY ++ D++S ++L
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 191 IQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
I + K F D D G ++ L + LG T+ ++ ++ D DG+GTID+ EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 251 RTAMTQRHK 259
M ++ K
Sbjct: 79 LVMMVRQMK 87
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F D + G ++ EL E L LGS +T +VK M D DG+G I + EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNAN----DFGLSVFIEEVGSPYYIAPEVLWQSYG--K 111
GV+HRDL P N L ++ + + N D + V +Y APE++ Q G K
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 112 EADIWSAEVIL 122
D+WSA ++
Sbjct: 214 LVDMWSAGCVM 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNAN----DFGLSVFIEEVGSPYYIAPEVLWQSYG--K 111
GV+HRDL P N L ++ + + N D + V +Y APE++ Q G K
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 112 EADIWSAEVIL 122
D+WSA ++
Sbjct: 214 LVDMWSAGCVM 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYYIA------------PE-VLW 106
+HRDL N L + EN V+ DFGLS I + YY A PE + +
Sbjct: 196 VHRDLATRNCL---VGENMVVKIADFGLSRNI--YSADYYKADGNDAIPIRWMPPESIFY 250
Query: 107 QSYGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKGEI 149
Y E+D+W+ V+L+ I G+ P + + V + G I
Sbjct: 251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 294
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEE-VGSPYYIAPEVLW-- 106
++HRD++ N + E + DFGL+ +E+ GS ++APEV+
Sbjct: 153 IIHRDMKSNNIF---LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 107 --QSYGKEADIWSAEVILYILLCGVPP 131
+ ++D++S ++LY L+ G P
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F DT+ G ++ EL + L LGS +T +V++ M D DG+G I + EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEF 68
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEF 313
ELG A K G T ++ +M+E D D DG IS+DEF
Sbjct: 32 ELGDALKTLGS---VTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
++ + F +D D SGTL +EL G G L+ + M+ D D NG I + EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEV----------GSPYYIAPEVLWQ 107
++HRD++ N L +DEN V DFG+S E+ G+ YI PE +
Sbjct: 159 AIIHRDVKSINIL---LDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 108 SYGKE-ADIWSAEVILYILLCG 128
E +D++S V+L+ +LC
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCA 237
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 13/57 (22%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE----------EVGSPYYIAPEVL 105
+ HRD + +N L S D AVL DFGL+V E +VG+ Y+APEVL
Sbjct: 144 IAHRDFKSKNVLLKS-DLTAVLA--DFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 17/91 (18%)
Query: 58 GVMHRDLRPENFL-FTSMDENAVLNANDFGLSV-------FIEEVGSPYYIAPEVLWQS- 108
G++HR+++P N + D +V DFG + F+ G+ Y+ P++ ++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 109 --------YGKEADIWSAEVILYILLCGVPP 131
YG D+WS V Y G P
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
++ + F +D D SGTL +EL G G L+ + M+ D D NG I + EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
Q+L E F +DTD SG ++ EL L+ G + ++ + D + +G I + EF+
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 252 TAMTQRHKLERFEISLQS--HPVDELGKAFKDDG--------MGDDATIATIKEIMSEDD 301
L F +S++ D G D G + T + +M + D
Sbjct: 87 -------DLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD 139
Query: 302 RDKDGRISYDEF 313
R + G + +D++
Sbjct: 140 RQRRGSLGFDDY 151
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 57 LGVMHRDLRPENFLFTS-----MDENAVLNANDFGLSVFIEEVGSPYYIAPEVLWQSYGK 111
+G+++ DL+PEN + T +D AV N FG G+P + APE++
Sbjct: 201 IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYL-----YGTPGFQAPEIVRTGPTV 255
Query: 112 EADIWSAEVILYILLCGVP 130
DI++ L L +P
Sbjct: 256 ATDIYTVGRTLAALTLDLP 274
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
EI++L+E F E D D G + +L + +G TE ++ + Q +++ G +D+ +
Sbjct: 8 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 67
Query: 250 FRTAM 254
F M
Sbjct: 68 FVELM 72
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 14/86 (16%)
Query: 59 VMHRDLRPENFLFTSM-DENAVLNANDFGLSVFIEEVGSP-----------YYIAPEVLW 106
V+HRDL+P N L E + D G + P +Y APE+L
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 107 --QSYGKEADIWSAEVILYILLCGVP 130
+ Y K DIW+ I LL P
Sbjct: 209 GARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 17/91 (18%)
Query: 58 GVMHRDLRPENFL-FTSMDENAVLNANDFGLSV-------FIEEVGSPYYIAPEVLWQS- 108
G++HR+++P N + D +V DFG + F+ G+ Y+ P++ ++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAV 191
Query: 109 --------YGKEADIWSAEVILYILLCGVPP 131
YG D+WS V Y G P
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS------VFIEEVG----SPYYIAPEVL-WQ 107
+HRDL N L T E VL +DFG+S V G + APE L +
Sbjct: 234 CIHRDLAARNCLVT---EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 108 SYGKEADIWSAEVILY 123
Y E+D+WS ++L+
Sbjct: 291 RYSSESDVWSFGILLW 306
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGST---LTEFDVKQYMQAADIDGNGTIDYIE 249
++K+ F +D D SG + +EL+ L S+ LT + K ++ A D DG+G I E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 250 FRT 252
F++
Sbjct: 102 FQS 104
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
T A K ++ D D DG+I +EF+S++K
Sbjct: 78 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSP-YYIAPEVLWQ 107
+HRDL N L ++ A + DFGL+ V E SP ++ APE L
Sbjct: 148 CVHRDLAARNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 108 S-YGKEADIWSAEVILYILL 126
+ + +++D+WS V+LY L
Sbjct: 205 NIFSRQSDVWSFGVVLYELF 224
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELREGLAKLGST---LTEFDVKQYMQAADIDGNGTIDYIE 249
++K+ F +D D SG + +EL+ L S+ LT + K ++ A D DG+G I E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 250 FRT 252
F++
Sbjct: 103 FQS 105
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
T A K ++ D D DG+I +EF+S++K
Sbjct: 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSP-YYIAPEVLWQ 107
+HRDL N L ++ A + DFGL+ V E SP ++ APE L
Sbjct: 135 CVHRDLAARNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 108 S-YGKEADIWSAEVILYILL 126
+ + +++D+WS V+LY L
Sbjct: 192 NIFSRQSDVWSFGVVLYELF 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS----------VFIEEVGSP-YYIAPEVLWQ 107
+HRDL N L ++ A + DFGL+ V E SP ++ APE L
Sbjct: 136 CVHRDLAARNIL---VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 108 S-YGKEADIWSAEVILYILL 126
+ + +++D+WS V+LY L
Sbjct: 193 NIFSRQSDVWSFGVVLYELF 212
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F E+D + G ++Y+E++ ++K + E ++ ++ D DGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
F ++D + G+++Y+E++ ++ E ++ +A DIDGNG ID EF
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF 58
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLS---------VFIEEVG-SP-YYIAPEVLWQ 107
+HRDL N L S A + DFGL+ + E G SP ++ APE L
Sbjct: 132 CVHRDLAARNILVES---EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 108 S-YGKEADIWSAEVILYILL 126
+ + +++D+WS V+LY L
Sbjct: 189 NIFSRQSDVWSFGVVLYELF 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLS--VFIEE---VGSPY-----YIAPE-VLWQS 108
+HRDL N L + N ++ DFG+S V+ + VG ++ PE ++++
Sbjct: 155 VHRDLATRNCLVGA---NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK 211
Query: 109 YGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKGEI 149
+ E+D+WS VIL+ I G P + + V + I +G +
Sbjct: 212 FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLAKLGS---TLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL+ L + LT+ + K +++A D DG+G I EF
Sbjct: 44 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEF 103
Query: 251 RTAMTQ 256
TA+ +
Sbjct: 104 -TALVK 108
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 141 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 198 KFSVASDVWSFGVVLYELF 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 154 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 211 KFSVASDVWSFGVVLYELF 229
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 143 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 200 KFSVASDVWSFGVVLYELF 218
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLA--KLGS-TLTEFDVKQYMQAADIDGNGTI 245
+K+ F +D D SG + DEL+ L K G+ LT+ + K +++A D DG+G I
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 98
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLA--KLGS-TLTEFDVKQYMQAADIDGNGTI 245
+K+ F +D D SG + DEL+ L K G+ LT+ + K +++A D DG+G I
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 97
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPY---YIAPE-VLW 106
+ +HRDL N L + EN V DFGL+ IE+ G+ + + APE L+
Sbjct: 133 MNYVHRDLAAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 107 QSYGKEADIWSAEVIL 122
+ ++D+WS ++L
Sbjct: 190 GRFTIKSDVWSFGILL 205
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 139 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 167 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 224 KFSVASDVWSFGVVLYELF 242
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 142 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 199 KFSVASDVWSFGVVLYELF 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 134 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 191 KFSVASDVWSFGVVLYELF 209
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 139 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 136 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 135 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 192 KFSVASDVWSFGVVLYELF 210
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQ 256
F D D +G +++ L+ +LG LT+ ++++ + AD DG+G + EF M +
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 75
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 273 DELGK-AFKD-----DGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
DE GK +FK+ +G++ T ++E++ E DRD DG +S EF +MK+
Sbjct: 23 DETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 75
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 136 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 154 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 211 KFSVASDVWSFGVVLYELF 229
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 140 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 197 KFSVASDVWSFGVVLYELF 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 139 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HRDL N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 136 IHRDLATRNILVE--NENRV-KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 290 IATIKEIMSEDDRDKDGRISYDEFRSMMKRGTQ 322
++T+ E++ E D++ DG +S++EF MMK+ +Q
Sbjct: 44 MSTLDEMIEEVDKNGDGEVSFEEFLVMMKKISQ 76
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 27/90 (30%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------------------VG 95
G++HRDL+P N +DE+ + DFGL+ + +G
Sbjct: 136 GIIHRDLKPMNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 96 SPYYIAPEVL--WQSYGKEADIWSAEVILY 123
+ Y+A EVL Y ++ D++S +I +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 27/90 (30%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------------------VG 95
G++HRDL+P N +DE+ + DFGL+ + +G
Sbjct: 136 GIIHRDLKPMNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 96 SPYYIAPEVL--WQSYGKEADIWSAEVILY 123
+ Y+A EVL Y ++ D++S +I +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
F D D SGT+T DE + G + +E D ++ Q D+D +G +D E MT++
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE----MTRQ 174
Query: 258 H 258
H
Sbjct: 175 H 175
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVK-QYMQAADIDGNGTIDYI 248
+IQ KE FT +D + G + D+LRE A +G +VK + + A + +G I++
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMG----RLNVKNEELDAMIKEASGPINFT 65
Query: 249 EFRTAMTQRHKLERFEISLQSHPVDELGKAFK---DDGMG 285
F T ++ K + P D + AFK DG G
Sbjct: 66 VFLTMFGEKLK--------GADPEDVIMGAFKVLDPDGKG 97
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 245 IDYIEFRTAMTQR--HKLERFEI--SLQSHPVDELGK-AFKD-----DGMGDDATIATIK 294
+++ +F T MTQ+ K + EI + + DE GK +FK+ +G++ T ++
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 295 EIMSEDDRDKDGRISYDEFRSMMKR 319
E++ E DRD DG +S EF +MK+
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKK 85
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQ 256
F D D +G +++ L+ +LG LT+ ++++ + AD DG+G + EF M +
Sbjct: 27 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 85
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVK-QYMQAADIDGNGTIDYI 248
EI+ KE FT +D + G + D+LRE A +G +VK + + A + +G I++
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG----RLNVKNEELDAMIKEASGPINFT 60
Query: 249 EFRTAMTQRHKLERFEISLQSHPVDELGKAFK---DDGMGDDATIATIKEIMSEDDRDKD 305
F T ++ K + P D + AFK DG G + K + E
Sbjct: 61 VFLTMFGEKLK--------GADPEDVIMGAFKVLDPDGKG-----SIKKSFLEELLTTGG 107
Query: 306 GRISYDEFRSM 316
GR + +E ++M
Sbjct: 108 GRFTPEEIKNM 118
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
FT D DN+G + ++E L+ E + + D++ +G I + E T +
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 258 HKLERFEISLQSHPVDELGKAFKDDGMGDDATIAT-IKEIMSEDDRDKDGRISYDEFR 314
+K+ ++L D+AT +K+I D+++DG I+ DEFR
Sbjct: 129 YKMMGSMVTLNE----------------DEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 202 DTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
D + +GT+ E+R L LG +TE +V+Q + A D NG I+Y E
Sbjct: 94 DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV-AGHEDSNGCINYEEL 141
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVK-QYMQAADIDGNGTIDYI 248
EI+ KE FT +D + G + D+LRE A +G +VK + + A + +G I++
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG----RLNVKNEELDAMIKEASGPINFT 78
Query: 249 EFRTAMTQRHKLERFEISLQSHPVDELGKAFK---DDGMGDDATIATIKEIMSEDDRDKD 305
F T ++ K + P D + AFK DG G + K + E
Sbjct: 79 VFLTMFGEKLK--------GADPEDVIMGAFKVLDPDGKG-----SIKKSFLEELLTTGG 125
Query: 306 GRISYDEFRSM 316
GR + +E ++M
Sbjct: 126 GRFTPEEIKNM 136
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 202 DTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
D + +GT+ E+R L LG +TE +V+Q + A D NG I+Y E
Sbjct: 96 DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV-AGHEDSNGCINYEEL 143
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
E Q+ KE F D DN LT +EL + LG+ T+ + + ++ D D +G D
Sbjct: 12 EQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQET 71
Query: 250 FRTAM 254
F T M
Sbjct: 72 FLTIM 76
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 272 VDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKRGTQ 322
++ELG+ + G+ I+++M + D++ DGRI +DEF MM+ G Q
Sbjct: 29 IEELGEILR--ATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME-GVQ 76
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 192 QKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFR 251
++L F D + G + +EL E L G + E D++ M+ +D + +G ID+ EF
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 252 TAM 254
M
Sbjct: 70 KMM 72
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL +G + + L+ + K M A D DG+G I EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 251 RTAMTQ 256
T + +
Sbjct: 103 STLVAE 108
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 273 DELGKAFKDDGMGDDATIATIKE---IMSEDDRDKDGRISYDEFRSMM 317
DELG K G DA + KE +M+ D+D DG+I +EF +++
Sbjct: 61 DELGSILK--GFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL +G + L+ + K M A D DG+G I+ EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Query: 251 RTAMTQ 256
T + +
Sbjct: 103 STLVAE 108
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 32/145 (22%)
Query: 57 LGVMHRDLRPENFLFTSMD----------ENAVLNANDFGLS--------VFIEEVGSPY 98
L ++HRDL+P+N L ++ EN + +DFGL F + +P
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 99 ----YIAPEVLWQS----YGKEADIWSAEVILYILLC-GVPPIWAE--TEQGVAQAILK- 146
+ APE+L +S + DI+S + Y +L G P + E + + I
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 271
Query: 147 GEINFQHDPFPSISSSAIELVRRML 171
E+ HD S+ + A +L+ +M+
Sbjct: 272 DEMKCLHD--RSLIAEATDLISQMI 294
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
F D D +G + +++ GL+ L +K DI+ +G I E M
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
Query: 258 HKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEF 313
+ + + ++P+ + +DA + ++ + DR++DG ++ DEF
Sbjct: 195 YDM----MGRHTYPI-----------LREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 32/145 (22%)
Query: 57 LGVMHRDLRPENFLFTSMD----------ENAVLNANDFGLS--------VFIEEVGSPY 98
L ++HRDL+P+N L ++ EN + +DFGL F + +P
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 99 ----YIAPEVLWQS----YGKEADIWSAEVILYILLC-GVPPIWAE--TEQGVAQAILK- 146
+ APE+L +S + DI+S + Y +L G P + E + + I
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 271
Query: 147 GEINFQHDPFPSISSSAIELVRRML 171
E+ HD S+ + A +L+ +M+
Sbjct: 272 DEMKCLHD--RSLIAEATDLISQMI 294
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLAKLGS---TLTEFDVKQYMQAADIDGNGTI 245
+K+ F +D D SG + DEL+ L + LT+ + K +++A D DG+G I
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAI 98
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 50 EDDQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY---------- 99
E++ F+ HRD+ N L T V DFG++ I G YY
Sbjct: 198 EENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG--YYRKGGCAMLPV 250
Query: 100 --IAPEVLWQS-YGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
+ PE + + + D WS V+L+ I G P +++ Q V + + G
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 59 VMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE------VGSPYYIAPEVLWQSYGKE 112
++HRDL+ +N T + D GL+ +G+P + APE + Y +
Sbjct: 152 IIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDES 209
Query: 113 ADIWS 117
D+++
Sbjct: 210 VDVYA 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 50 EDDQFVLLGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEEVGSPYY---------- 99
E++ F+ HRD+ N L T V DFG++ I G YY
Sbjct: 175 EENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG--YYRKGGCAMLPV 227
Query: 100 --IAPEVLWQS-YGKEADIWSAEVILY-ILLCGVPPIWAETEQGVAQAILKG 147
+ PE + + + D WS V+L+ I G P +++ Q V + + G
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL +G + L+ + K M A D DG+G I EF
Sbjct: 44 VKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
Query: 251 RTAMTQ 256
T + +
Sbjct: 104 STLVAE 109
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 273 DELGKAFKDDGMGDDATIATIKE---IMSEDDRDKDGRISYDEFRSMM 317
DELG K G DA + KE +M+ D+D DG+I DEF +++
Sbjct: 62 DELGFILK--GFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 193 KLKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
++KE F +D D SG + +EL+ +G + G L + + K + A D D +G I E
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 250 FRTAMTQ 256
F + Q
Sbjct: 102 FAKMVAQ 108
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G+++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2IVF|A Chain A, Ethylbenzene Dehydrogenase From Aromatoleum Aromaticum
Length = 976
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 18 VKDYEKDDVRREVAVMQYLSG---QPNIVKFKAAYEDDQFVLLGVMHRDLR--------- 65
K Y D + R + + LSG +P F AY DD V LGVM +
Sbjct: 449 AKSYHGDLMERSLFLAMALSGNWGKPGTGAFAWAYSDDNMVYLGVMSKPTAQGGMDELHQ 508
Query: 66 -PENFLFTSMDENAVLNANDFGLSVFIEEVGSPYYIAPEVLWQSY 109
E F +++ + + ++ G F++ V S + P +W Y
Sbjct: 509 MAEGFNKRTLEADPT-STDEMGNIEFMKVVTSAVGLVPPAMWLYY 552
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 60 MHRDLRPENFLFTSMDENAVLNANDFGLSVF---------IEEVG-SP-YYIAPEVLWQS 108
+HR+L N L +EN V DFGL+ ++E G SP ++ APE L +S
Sbjct: 137 IHRNLATRNILVE--NENRV-KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 109 -YGKEADIWSAEVILYILL 126
+ +D+WS V+LY L
Sbjct: 194 KFSVASDVWSFGVVLYELF 212
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL +G + L+ + K M A D DG+G I EF
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 251 RTAMTQ 256
T + +
Sbjct: 67 STLVAE 72
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 273 DELGKAFKDDGMGDDATIATIKE---IMSEDDRDKDGRISYDEFRSMM 317
DELG K G DA + KE +M+ D+D DG+I +EF +++
Sbjct: 25 DELGSILK--GFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 70
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 36/149 (24%)
Query: 57 LGVMHRDLRPENFLFTSMD----------ENAVLNANDFGL--------SVFIEEVGSPY 98
L ++HRDL+P+N L ++ EN + +DFGL S F + +P
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 99 ----YIAPEVLWQSYG--------KEADIWSAEVILYILLC-GVPPIWAE--TEQGVAQA 143
+ APE+L +S + DI+S + Y +L G P + E + +
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 253
Query: 144 ILK-GEINFQHDPFPSISSSAIELVRRML 171
I E+ HD S+ + A +L+ +M+
Sbjct: 254 IFSLDEMKCLHD--RSLIAEATDLISQMI 280
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 194 LKEKFTEMDTDNSGTLTYDELREGLAKLGS---TLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL+ L + LT+ + K +++A D DG+G I E+
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
Query: 251 RTAMTQ 256
TA+ +
Sbjct: 103 -TALVK 107
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
++ KEK+ E D +N G + L+ + KLG T ++K+ + + TI Y +
Sbjct: 48 KLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRD 107
Query: 250 FRTAM 254
F M
Sbjct: 108 FVNMM 112
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL +G + L+ + K M A D DG+G I EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 251 RTAMTQ 256
T + +
Sbjct: 103 STLVAE 108
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 273 DELGKAFKDDGMGDDATIATIKE---IMSEDDRDKDGRISYDEFRSMM 317
DELG K G DA + KE +M+ D+D DG+I +EF +++
Sbjct: 61 DELGSILK--GFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-----EVGS----PY-YIAPE-VL 105
L +HRDL N L + + V+ DFG+S I VG P ++ PE +L
Sbjct: 148 LHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 204
Query: 106 WQSYGKEADIWSAEVILY 123
++ + E+D+WS V+L+
Sbjct: 205 YRKFTTESDVWSFGVVLW 222
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
++ KEK+ E D +N G + L+ + KLG T ++K+ + + TI Y +
Sbjct: 48 KLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRD 107
Query: 250 FRTAM 254
F M
Sbjct: 108 FVNMM 112
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKLE 261
G + L+ L G ++ +V Q + A IDGNG ID +F +T+ K E
Sbjct: 140 GKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAKEE 194
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 201 MDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKL 260
+D D SGT+ ++E +E A L +Q+ + D D +GT+D E + A+T
Sbjct: 82 LDRDMSGTMGFNEFKELWAVLNGW------RQHFISLDTDRSGTVDPQELQKALTTMG-- 133
Query: 261 ERFEISLQSHPVDELGKAFKDDG 283
F +S Q+ V+ + K + +G
Sbjct: 134 --FRLSPQA--VNSIAKRYSTNG 152
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 195 KEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTID 246
++ F +DTD SGT+ EL++ L +G L+ V + +G T D
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-----EVGS----PY-YIAPE-VL 105
L +HRDL N L + + V+ DFG+S I VG P ++ PE +L
Sbjct: 154 LHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 210
Query: 106 WQSYGKEADIWSAEVILY 123
++ + E+D+WS V+L+
Sbjct: 211 YRKFTTESDVWSFGVVLW 228
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 57 LGVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE-----EVGS----PY-YIAPE-VL 105
L +HRDL N L + + V+ DFG+S I VG P ++ PE +L
Sbjct: 177 LHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 233
Query: 106 WQSYGKEADIWSAEVILY 123
++ + E+D+WS V+L+
Sbjct: 234 YRKFTTESDVWSFGVVLW 251
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 196 EKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
E F D + +G + ELR L LG +TE +V+ + A D NG I+Y F
Sbjct: 91 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL-AGHEDSNGCINYEAF 144
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G ++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G ++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 201 MDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKL 260
+D D SGT+ ++E +E A L +Q+ + D D +GT+D E + A+T
Sbjct: 82 LDRDMSGTMGFNEFKELWAVLNGW------RQHFISFDTDRSGTVDPQELQKALTTMG-- 133
Query: 261 ERFEISLQSHPVDELGKAFKDDG 283
F +S Q+ V+ + K + +G
Sbjct: 134 --FRLSPQA--VNSIAKRYSTNG 152
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 195 KEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTID 246
++ F DTD SGT+ EL++ L +G L+ V + +G T D
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 13/58 (22%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE----------EVGSPYYIAPEVL 105
+ HRD++ +N L + N DFGL++ E +VG+ Y+APEVL
Sbjct: 151 AISHRDIKSKNVLLKN---NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G ++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 207 GTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHK 259
G ++ EL + + LG T ++++ + D DG+GT+D+ EF M + K
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 274 ELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEFRSMMKR 319
ELGK + +G + T ++E++ E D D G + +DEF MM R
Sbjct: 40 ELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 27/90 (30%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIEE----------------------VG 95
G++HR+L+P N +DE+ + DFGL+ + +G
Sbjct: 136 GIIHRNLKPXNIF---IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 96 SPYYIAPEVL--WQSYGKEADIWSAEVILY 123
+ Y+A EVL Y ++ D +S +I +
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 40/106 (37%)
Query: 58 GVMHRDLRPENFLFTSMDENAVLNANDFGLSVFIE------------------------- 92
G++HRDL+P N L ++++ + DFGL+ ++
Sbjct: 176 GILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 93 ----------EVGSPYYIAPE--VLWQSYGKEADIWSAEVILYILL 126
V + +Y APE +L ++Y + D+WS I LL
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 288 ATIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
T I+++M + D++ DGRI +DEF MM+
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 198 FTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQR 257
F DTD++G +++++ +GL+ L + + DI+ +G I E M
Sbjct: 108 FNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI 167
Query: 258 HKLERFEISLQSHPVDELGKAFKDDGMGDDATIATIKEIMSEDDRDKDGRISYDEF 313
+ + + ++PV + +DA ++ + D++KDG ++ DEF
Sbjct: 168 YDM----MGKCTYPV-----------LKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 194 LKEKFTEMDTDNSGTLTYDELR---EGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEF 250
+K+ F +D D SG + DEL+ + + LT+ + K ++ D DG+G I EF
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 289 TIATIKEIMSEDDRDKDGRISYDEFRSMMK 318
T A K +++ D+D DG I DEF +M+K
Sbjct: 78 TDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 25/33 (75%)
Query: 290 IATIKEIMSEDDRDKDGRISYDEFRSMMKRGTQ 322
++T+ E+ E D++ DG +S++EF+ ++K+ +Q
Sbjct: 43 MSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 190 EIQKLKEKFTEMDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIE 249
+IQK ++ + E+D D SGT+ E+R+ L + G + + Q + A D ID+
Sbjct: 602 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMP-CQLHQVIVARFADDQLIIDFDN 660
Query: 250 FRTAMTQRHKLERFEISLQSHP 271
F + + L F+I Q P
Sbjct: 661 FVRCLVRLETL--FKIFKQLDP 680
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 25/33 (75%)
Query: 290 IATIKEIMSEDDRDKDGRISYDEFRSMMKRGTQ 322
++T+ E+ E D++ DG +S++EF+ ++K+ +Q
Sbjct: 44 MSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 201 MDTDNSGTLTYDELREGLAKLGSTLTEFDVKQYMQAADIDGNGTIDYIEFRTAMTQRHKL 260
+D D SGT+ ++E +E A L +Q+ + D D +GT+D E + A+T
Sbjct: 51 LDRDMSGTMGFNEFKELWAVLNGW------RQHFISFDSDRSGTVDPQELQKALTT---- 100
Query: 261 ERFEISLQSHPVDELGKAFKDDG--MGDDATIATIK-EIMSEDDRDKDG------RISYD 311
L V+ + K + G DD +K +++ R +D SYD
Sbjct: 101 --MGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYD 158
Query: 312 EF 313
+F
Sbjct: 159 DF 160
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,122,986
Number of Sequences: 62578
Number of extensions: 368368
Number of successful extensions: 3685
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 493
Number of HSP's that attempted gapping in prelim test: 1511
Number of HSP's gapped (non-prelim): 1651
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)