Query 041590
Match_columns 493
No_of_seqs 177 out of 1022
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 14:45:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 6E-104 2E-108 834.2 26.8 401 20-471 3-431 (433)
2 1ia6_A Cellulase CEL9M; cellul 100.0 2E-102 5E-107 824.9 30.2 398 19-473 3-431 (441)
3 2xfg_A Endoglucanase 1; hydrol 100.0 2E-101 7E-106 820.0 29.3 405 19-473 23-464 (466)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 1E-100 3E-105 838.1 32.1 407 19-473 3-445 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 5E-101 2E-105 841.1 25.5 421 11-474 26-518 (611)
6 1g87_A Endocellulase 9G; endog 100.0 4.8E-99 2E-103 825.4 31.4 404 19-473 3-441 (614)
7 3gzk_A Cellulase; fold from GH 100.0 3.3E-91 1.1E-95 754.2 22.7 396 21-473 87-536 (537)
8 1clc_A Endoglucanase CELD; EC: 100.0 4.1E-90 1.4E-94 759.1 25.5 399 21-472 128-565 (639)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 4.8E-87 1.7E-91 732.2 27.6 419 21-471 100-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.4E-58 4.7E-63 499.1 18.8 385 28-468 119-564 (586)
11 3gt5_A N-acetylglucosamine 2-e 94.0 0.3 1E-05 50.1 11.5 121 95-249 69-201 (402)
12 2gz6_A N-acetyl-D-glucosamine 92.0 0.45 1.6E-05 48.1 9.1 141 74-249 53-200 (388)
13 3k7x_A LIN0763 protein; Q92DQ0 88.5 1.1 3.6E-05 45.3 8.1 64 187-250 170-242 (349)
14 3gt5_A N-acetylglucosamine 2-e 87.1 11 0.00039 38.2 15.0 172 56-249 153-338 (402)
15 3k7x_A LIN0763 protein; Q92DQ0 75.3 5.5 0.00019 40.0 7.3 65 169-249 53-120 (349)
16 1fp3_A N-acyl-D-glucosamine 2- 75.2 16 0.00053 36.8 10.8 125 99-250 15-151 (402)
17 2zzr_A Unsaturated glucuronyl 74.9 3.5 0.00012 42.4 5.7 127 97-249 133-274 (397)
18 1fp3_A N-acyl-D-glucosamine 2- 73.8 5 0.00017 40.6 6.6 25 225-249 318-342 (402)
19 2gz6_A N-acetyl-D-glucosamine 70.8 46 0.0016 33.0 13.0 26 224-249 307-332 (388)
20 2ahf_A Unsaturated glucuronyl 66.8 6.9 0.00024 39.8 5.8 79 170-249 156-249 (377)
21 2zbl_A Putative isomerase; N-a 66.7 9.9 0.00034 38.9 7.1 63 187-249 273-344 (421)
22 1nc5_A Hypothetical protein YT 65.6 7.9 0.00027 39.0 5.9 62 187-249 107-171 (373)
23 3e6u_A LANC-like protein 1; al 53.7 70 0.0024 32.4 10.7 115 95-250 248-364 (411)
24 3k11_A Putative glycosyl hydro 48.9 51 0.0017 34.2 8.7 114 94-240 287-417 (445)
25 1nc5_A Hypothetical protein YT 44.2 73 0.0025 31.7 8.9 25 226-250 92-116 (373)
26 3pmm_A Putative cytoplasmic pr 42.6 1.5E+02 0.0052 29.7 11.0 22 228-249 117-138 (382)
27 2zbl_A Putative isomerase; N-a 41.3 58 0.002 33.0 7.8 140 73-249 50-200 (421)
28 2v8i_A Pectate lyase; periplas 29.5 33 0.0011 35.8 3.4 24 226-249 431-454 (543)
29 2g0d_A Nisin biosynthesis prot 29.3 2.7E+02 0.0094 27.5 10.5 70 167-249 284-353 (409)
30 2ahf_A Unsaturated glucuronyl 27.6 4.4E+02 0.015 26.3 11.6 44 75-129 153-196 (377)
31 3pmm_A Putative cytoplasmic pr 25.3 1.1E+02 0.0037 30.8 6.4 70 181-250 23-97 (382)
32 1gxm_A Pectate lyase; mechanis 23.9 96 0.0033 30.8 5.5 22 96-117 92-113 (332)
33 2zzr_A Unsaturated glucuronyl 21.5 6.3E+02 0.021 25.4 12.7 46 73-129 176-221 (397)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=6.3e-104 Score=834.18 Aligned_cols=401 Identities=36% Similarity=0.598 Sum_probs=357.7
Q ss_pred CCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHHH
Q 041590 20 PNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIE 85 (493)
Q Consensus 20 ~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~e 85 (493)
+||.++|+ |.++|++||+||||.||+.. ++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus 3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e 78 (433)
T 1ks8_A 3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQ----GQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLID 78 (433)
T ss_dssp CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTT----CCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcC----cccCCCceeECCCCCeeccchHHHHHHHHHHHHH
Confidence 58888887 88999999999999999766 9999999999999999999999999999999999
Q ss_pred hHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC---
Q 041590 86 YRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT--- 162 (493)
Q Consensus 86 ~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~--- 162 (493)
|++.|++++++||||||||||+|||||||+++ |.||+|||++.. ||.+|++||+++++|++|+++
T Consensus 79 ~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----g~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~~y~~~~~~ 146 (433)
T 1ks8_A 79 FEAGYSSAGALDDGRKAVKWATDYFIKAHTSQ----NEFYGQVGQGDA--------DHAFWGRPEDMTMARPAYKIDTSR 146 (433)
T ss_dssp THHHHHHTTCHHHHHHHHHHHHHHHHHHCCBT----TBEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEECSSS
T ss_pred hHHhhhcCCchHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------CCcccCCHhhCCCCCceeeccCCC
Confidence 99999999999999999999999999999988 999999999977 999999999999999999876
Q ss_pred chHHH----HHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHh
Q 041590 163 SSSDL----AAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYAT 237 (493)
Q Consensus 163 ~~~d~----Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~AT 237 (493)
|++++ ||++|+|||||| +||+||++||++||++|+||++||+.|.++++...++|+|+++.||++|||+|||+||
T Consensus 147 pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aT 226 (433)
T 1ks8_A 147 PGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRAT 226 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHh
Confidence 65554 566666999999 9999999999999999999999999998777767789999999999999999999999
Q ss_pred CChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcCCCCC
Q 041590 238 GNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSS 317 (493)
Q Consensus 238 Gd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (493)
|+++|++++++++. .+........|+|+++..+++++|++++ . .+.|++.++.++|.++. .
T Consensus 227 gd~~Yl~~~~~~~~-----~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~~~~~~---~ 287 (433)
T 1ks8_A 227 NDNTYLNTAESLYD-----EFGLQNWGGGLNWDSKVSGVQVLLAKLT---N--------KQAYKDTVQSYVNYLIN---N 287 (433)
T ss_dssp CCHHHHHHHHHHHH-----HTTGGGSCCCCCSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHH-----hcCcCcCcCCcCccchhhHHHHHHhhcc---C--------hHHHHHHHHHHHHHHHh---c
Confidence 99999999998642 1111123457999999999999998753 1 25688888888887763 3
Q ss_pred CccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHH-H-----HHHHHHhchhhccCCCCCCceEeeeCCCCC
Q 041590 318 WNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNC-L-----SCWFTWMIDYILGNNPQKMSYLVGFGSPYP 391 (493)
Q Consensus 318 ~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~-~-----~~~a~~qidYiLG~Np~~~SyV~G~G~~~p 391 (493)
.++||+| +++.. .||||++++|++|++++++++ + +++|++|||||||+| ++|||||||+|+|
T Consensus 288 ~~~tp~G--------l~~~~--~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p 355 (433)
T 1ks8_A 288 QQKTPKG--------LLYID--MWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPP 355 (433)
T ss_dssp SCBCTTS--------CBCCC--STTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred CCcCCCC--------ceeec--CCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCC
Confidence 4679999 65543 589999999999999999998 3 689999999999998 6899999999999
Q ss_pred CCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHHHHHHhhcC
Q 041590 392 QYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGK 471 (493)
Q Consensus 392 ~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 471 (493)
++||||+++||.. +..|. +.+.+++.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|.+.
T Consensus 356 ~~pHHR~s~~~~~--~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 356 TRPHHRSSSCPPA--PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp SCCSCHHHHCCCT--TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCcchhhcCCCc--ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 9999999999854 45785 4467889999999999999999999999999999999999999999999999999764
No 2
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=1.5e-102 Score=824.90 Aligned_cols=398 Identities=28% Similarity=0.481 Sum_probs=347.5
Q ss_pred CCCcccccC--------------CC-CCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHH
Q 041590 19 SPNYTLDTR--------------PS-CSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSV 83 (493)
Q Consensus 19 ~~~y~~al~--------------p~-~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~ 83 (493)
..||+++|+ |. ++|++||++||++||+.. ++||+|||||||||+||++|+|+|+++|+|++
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~ 78 (441)
T 1ia6_A 3 THDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDV----GVDLTGGYHDAGDHVKFGLPQGYSAAILGWSL 78 (441)
T ss_dssp CCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTT----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCC----cccCCCCeeeCCCCCeeccchHHHHHHHHHHH
Confidence 468999988 65 899999999999999865 99999999999999999999999999999999
Q ss_pred HHhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccc-cccC
Q 041590 84 IEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPV-QECT 162 (493)
Q Consensus 84 ~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~-~~~~ 162 (493)
+||++.|++.++++|||||||||+|||||||+++ +.||+||||+.. ||.+|++||+++++|++ |.++
T Consensus 79 ~e~~~~~~~~g~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~~~y~~~ 146 (441)
T 1ia6_A 79 YEFKESFDATGNTTKMLQQLKYFTDYFLKSHPNS----TTFYYQVGEGNA--------DHTYWGAPEEQTGQRPSLYKAD 146 (441)
T ss_dssp HHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HTTCCSCGGGCCSCCCCCEEEB
T ss_pred HHhHHHHhhcCcHHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCChhhCCCCCceeeEeC
Confidence 9999999999999999999999999999999887 999999999977 99999999999999999 8765
Q ss_pred ---chHHH----HHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHH
Q 041590 163 ---SSSDL----AAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLY 234 (493)
Q Consensus 163 ---~~~d~----Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy 234 (493)
|++++ ||+||+|||||| +||+||++||++||++|+||++||+.+. .+++|+|+++.||++|||+|||
T Consensus 147 ~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-----~~~~Y~ss~~~DE~~WAAa~Ly 221 (441)
T 1ia6_A 147 PSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-----GQSFYQATSFGDDLAWAATWLY 221 (441)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-----CTTTSCCCCSHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCchhHHHHHHHHHH
Confidence 66654 666667999999 9999999999999999999999998642 4679999999999999999999
Q ss_pred HHhCChhhHHHHHhcccCCccccccC--cCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhc
Q 041590 235 YATGNSSYLKLVTTTGLGKQAGIFRG--ILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYL 312 (493)
Q Consensus 235 ~ATGd~~Yl~~a~~~~~~~~~~~~~~--~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (493)
+|||+++|+++++++... ...... ......|+||++..+++++|++++ . ...|++.++..++.++
T Consensus 222 ~aTgd~~Yl~~a~~~~~~--~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~~~~~ 288 (441)
T 1ia6_A 222 TATNDSTYITDAEQFITL--GNTMNENKMQDKWTMCWDDMYVPAALRLAQIT---G--------KQIYKDAIEFNFNYWK 288 (441)
T ss_dssp HHHCCTHHHHHHHHHTTC--------CGGGCSSCSSSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHhh--hhhcccccccCCCcCCccchHHHHHHHHHhcc---C--------cHHHHHHHHHHHHHHH
Confidence 999999999999986421 111000 012457999999999999988753 1 1356777777666554
Q ss_pred CCCCCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH-----HHHHHHhchhhccCCCCCCceEeeeC
Q 041590 313 PNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL-----SCWFTWMIDYILGNNPQKMSYLVGFG 387 (493)
Q Consensus 313 ~~~~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~-----~~~a~~qidYiLG~Np~~~SyV~G~G 387 (493)
...++||+| +.+.. .||||++++|++|+++++++++ +++|++|||||||+||+++|||||||
T Consensus 289 ---~~~~~tp~G--------l~~~~--~WGs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G 355 (441)
T 1ia6_A 289 ---TQVTTTPGG--------LKWLS--NWGVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQVDYILGDNPANMSYIIGYG 355 (441)
T ss_dssp ---HTSCBCTTS--------CBCCC--STTHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTCSTTCCCSBTTSS
T ss_pred ---hhcccCCCC--------ceecC--CcchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCCCceeEEecC
Confidence 345789999 66544 4899999999999999999976 68999999999999999999999999
Q ss_pred CCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHHHHHH
Q 041590 388 SPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVA 467 (493)
Q Consensus 388 ~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~ 467 (493)
+|+|++||||+++|+..+ +.+.|.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+
T Consensus 356 ~~~p~~pHHR~s~~~~~~----------~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~ 425 (441)
T 1ia6_A 356 SNWCIHPHHRAANGYTYA----------NGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAG 425 (441)
T ss_dssp SSCCSCCBCHHHHCCCCC------------CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcChhhccCCcc----------ccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHH
Confidence 999999999999987421 3456888999999999999999999999999999999999999999999999
Q ss_pred hhcCCC
Q 041590 468 LSGKKS 473 (493)
Q Consensus 468 l~~~~~ 473 (493)
|....+
T Consensus 426 l~~~~~ 431 (441)
T 1ia6_A 426 AIKFFG 431 (441)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 998765
No 3
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=1.9e-101 Score=819.96 Aligned_cols=405 Identities=32% Similarity=0.477 Sum_probs=346.9
Q ss_pred CCCcccccC---------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHH
Q 041590 19 SPNYTLDTR---------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSV 83 (493)
Q Consensus 19 ~~~y~~al~---------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~ 83 (493)
..||.++|+ |+++|++||++||+.||+.. ++||+|||||||||+||++|+|+|+++|+|++
T Consensus 23 ~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~----~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~ 98 (466)
T 2xfg_A 23 AFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDA----GIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAV 98 (466)
T ss_dssp SSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccc----cccCCCCceeCCCCCeeccccHHHHHHHHHHH
Confidence 459999988 77899999999999999866 99999999999999999999999999999999
Q ss_pred HHhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC-
Q 041590 84 IEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT- 162 (493)
Q Consensus 84 ~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~- 162 (493)
+||++.|++++++||||||||||+|||||||+.+ +.||+||||+.. ||.+|++||.++.+|++|.++
T Consensus 99 ~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~W~~pe~~~~~R~~y~i~~ 166 (466)
T 2xfg_A 99 YEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEK----DVYYYQVGDGHA--------DHAWWGPAEVMPMERPSYKVDR 166 (466)
T ss_dssp HHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TEEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEEES
T ss_pred HHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCCcccCCCCCceeEecC
Confidence 9999999999999999999999999999999887 999999999876 999999999999889988765
Q ss_pred --chHH----HHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCC-CCchhHHHHHHHHHH
Q 041590 163 --SSSD----LAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNS-RSYWDEFTWSGAWLY 234 (493)
Q Consensus 163 --~~~d----~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s-~~~~De~~wAAaeLy 234 (493)
|+++ +||+||+|||||| +||+||++||++||++|+||++||+.|. .+..+++|+| +++.||++|||+|||
T Consensus 167 ~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~s~s~~~DEl~WAAawLy 244 (466)
T 2xfg_A 167 SSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDG--YTAANGFYNSWSGFYDELSWAAVWLY 244 (466)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSSCSHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCC--CCccccccCCCCCCchHHHHHHHHHH
Confidence 6665 4666667999999 9999999999999999999999999884 3445789999 999999999999999
Q ss_pred HHhCChhhHHHHHhcccCCccc-cccCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcC
Q 041590 235 YATGNSSYLKLVTTTGLGKQAG-IFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLP 313 (493)
Q Consensus 235 ~ATGd~~Yl~~a~~~~~~~~~~-~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (493)
+|||+++|++++++++...... ........+.|+||+|..+++++|++++. .+ ..|++.++..++.+++
T Consensus 245 ~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~~--------~~~~~~~~~~~~~~~~ 314 (466)
T 2xfg_A 245 LATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKN--DN--------GKYKEAIERHLDWWTT 314 (466)
T ss_dssp HHHCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHHC--SS--------CHHHHHHHHHHHHHTT
T ss_pred HHhCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhcC--Cc--------HHHHHHHHHHHHHHHh
Confidence 9999999999999864211000 00001123579999999999999987641 11 1345555555555543
Q ss_pred C--CCCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH----------HHHHHHhchhhccCCCCCCc
Q 041590 314 N--FSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL----------SCWFTWMIDYILGNNPQKMS 381 (493)
Q Consensus 314 ~--~~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~----------~~~a~~qidYiLG~Np~~~S 381 (493)
. ...+++||+| |++.. .|||++|++|++||+++|++++ ++||++|||||||+| ++|
T Consensus 315 ~~~~~~~~~tp~G--------l~~~~--~Wgs~~~~~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~N--~~S 382 (466)
T 2xfg_A 315 GYNGERITYTPKG--------LAWLD--QWGSLRYATTTAFLACVYSDWENGDKEKAKTYLEFARSQADYALGST--GRS 382 (466)
T ss_dssp CBTTBCCCBCTTS--------CBCCC--SSSHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTTT--SSC
T ss_pred ccCCCccccCCcc--------ccccC--CCCchHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHhHHhhcCCC--Ccc
Confidence 2 1346789999 77655 4899999999999999999863 688999999999999 899
Q ss_pred eEeeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHH
Q 041590 382 YLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGL 461 (493)
Q Consensus 382 yV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~l 461 (493)
||||||+|+|++||||+++|+... +.+.+.||+++|+|+||||||..|+|.|+|.+|++|||||||||+|
T Consensus 383 yvvG~G~~~p~~pHHR~ss~~~~~----------~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~ 452 (466)
T 2xfg_A 383 FVVGFGENPPKRPHHRTAHGSWAD----------SQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGF 452 (466)
T ss_dssp CBTTSSSSCCSCCSCHHHHTCSSS----------CTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHH
T ss_pred eEeccCCCCCCCCcCchhccCccc----------cccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHH
Confidence 999999999999999999986421 2346788999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCC
Q 041590 462 VAALVALSGKKS 473 (493)
Q Consensus 462 v~~la~l~~~~~ 473 (493)
|++||+|....+
T Consensus 453 v~~la~l~~~~g 464 (466)
T 2xfg_A 453 VGLLAKMYKLYG 464 (466)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC
Confidence 999999987654
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=9.9e-101 Score=838.13 Aligned_cols=407 Identities=33% Similarity=0.525 Sum_probs=355.7
Q ss_pred CCCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHH
Q 041590 19 SPNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVI 84 (493)
Q Consensus 19 ~~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~ 84 (493)
..||.++|+ |+++|++||+||||.||+.. ++||+|||||||||+||++|+|+|+++|+|+++
T Consensus 3 ~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~ 78 (605)
T 1tf4_A 3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADV----GLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAI 78 (605)
T ss_dssp SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccc----cccCCCceeECCCCCEeccchHHHHHHHHHHHH
Confidence 458999988 88999999999999999876 999999999999999999999999999999999
Q ss_pred HhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC--
Q 041590 85 EYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT-- 162 (493)
Q Consensus 85 e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~-- 162 (493)
||++.|+++++++|||||||||+|||||||+.+ +.||.||||+.. ||.+|++||.++.+|++|.++
T Consensus 79 e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~m~~~r~~y~~~~~ 146 (605)
T 1tf4_A 79 ESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA--------DHKWWGPAEVMPMERPSFKVDPS 146 (605)
T ss_dssp HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TBEEEEESCHHH--------HHHCCSCGGGCCSCCCEEEEBTT
T ss_pred HhHHHHhhcCCcccHHHHHHHHHHHHHHhccCC----CeEEEEeCCCCc--------CccccCChhhCCCCCceeEecCC
Confidence 999999999999999999999999999999887 999999999876 999999999999999999875
Q ss_pred -chHHH----HHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCC-CCchhHHHHHHHHHHH
Q 041590 163 -SSSDL----AAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNS-RSYWDEFTWSGAWLYY 235 (493)
Q Consensus 163 -~~~d~----Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s-~~~~De~~wAAaeLy~ 235 (493)
|++++ ||+||+|||||| +||+||++||++||++|+||++||+.|.++.+ .+++|+| +++.||++|||+|||+
T Consensus 147 ~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ 225 (605)
T 1tf4_A 147 CPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYK 225 (605)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHHHHHHHHH
Confidence 66765 556666999999 99999999999999999999999999988777 7889999 9999999999999999
Q ss_pred HhCChhhHHHHHhcccCCccccccC-cCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcCC
Q 041590 236 ATGNSSYLKLVTTTGLGKQAGIFRG-ILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPN 314 (493)
Q Consensus 236 ATGd~~Yl~~a~~~~~~~~~~~~~~-~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (493)
|||+++|++++++++.......... ....+.++|+++..++++||++++ . .+.|++.++.++|.+++.
T Consensus 226 ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~y~~~a~~~~~~~~~~ 294 (605)
T 1tf4_A 226 ATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET---G--------KQKYIDDANRWLDYWTVG 294 (605)
T ss_dssp HHCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHTTTC
T ss_pred HhCCHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHhcc---C--------hHHHHHHHHHHHHHHhcc
Confidence 9999999999998642110000000 011257999999999999888753 1 256889899898877643
Q ss_pred C--CCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH---------HHHHHHhchhhccCCCCCCceE
Q 041590 315 F--SSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL---------SCWFTWMIDYILGNNPQKMSYL 383 (493)
Q Consensus 315 ~--~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~---------~~~a~~qidYiLG~Np~~~SyV 383 (493)
. ...++||+| +.+.. .||||+|++|++||++++++++ ++||++|||||||+||+++|||
T Consensus 295 ~~~~~~~~tp~G--------l~~~~--~WGs~~~~~n~a~l~~~~a~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~Syv 364 (605)
T 1tf4_A 295 VNGQRVPYSPGG--------MAVLD--TWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYV 364 (605)
T ss_dssp BTTBCCCBCTTS--------CBCCC--SSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTCSTTCCCSB
T ss_pred cCCCccccCCCc--------ceecC--CccHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHhcCCCCCCcceE
Confidence 2 245789999 66655 4899999999999999998763 6789999999999999999999
Q ss_pred eeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCC-CCCcccccCcccccccccccchHHH
Q 041590 384 VGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHK-HDGFHDVRSNYNYTVPTLHDNAGLV 462 (493)
Q Consensus 384 ~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~-~d~y~D~~~~y~~NEvaId~NA~lv 462 (493)
||||+|+|++||||+++|+.. ...++|.||+++|+|+||||||. .|+|.|+|.+|++|||||||||+||
T Consensus 365 vG~G~~~p~~pHHR~ss~~~~----------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv 434 (605)
T 1tf4_A 365 VGFGNNPPRNPHHRTAHGSWT----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFS 434 (605)
T ss_dssp TTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHH
T ss_pred ecCCCCCCCCCcccccccCcc----------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHH
Confidence 999999999999999987421 12346788999999999999998 9999999999999999999999999
Q ss_pred HHHHHhhcCCC
Q 041590 463 AALVALSGKKS 473 (493)
Q Consensus 463 ~~la~l~~~~~ 473 (493)
++||+|....+
T Consensus 435 ~~lA~l~~~~~ 445 (605)
T 1tf4_A 435 SALAMLVEEYG 445 (605)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999988664
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=5.3e-101 Score=841.09 Aligned_cols=421 Identities=26% Similarity=0.426 Sum_probs=351.3
Q ss_pred hcCCCCC---CCCCcccccC--------------CC-CCCCCCccCCCCCCCCCC----------------------CCC
Q 041590 11 DIPKHNN---FSPNYTLDTR--------------PS-CSSMPNDGDSCLTDGKFD----------------------SSG 50 (493)
Q Consensus 11 ~~~~~~~---~~~~y~~al~--------------p~-~~~~~Wr~~s~l~Dg~~~----------------------~~~ 50 (493)
++|.... ...+|.++|+ |. ++|++||++||++||... ..+
T Consensus 26 ~~~~~~~~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~ 105 (611)
T 2yik_A 26 SFNTVSTSAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGD 105 (611)
T ss_dssp ------------CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCS
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCC
Confidence 4554333 3359999998 55 799999999999998210 135
Q ss_pred ccccccccccccCCCcccccchHHHHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhc-----cccccCccCeEE
Q 041590 51 ITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKT-----FNHSADSISRII 125 (493)
Q Consensus 51 ~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~-----~~~~~~~~~~~y 125 (493)
.++||+|||||||||+||++|+|+|+++|+|+++||++.|++++++||+|||||||+|||||| |+.+ +.||
T Consensus 106 ~~~DlsGGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~----g~~y 181 (611)
T 2yik_A 106 GKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNV----VAFC 181 (611)
T ss_dssp SEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCE----EEEE
T ss_pred CcccCCCCceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCC----CcEE
Confidence 689999999999999999999999999999999999999999999999999999999999999 6666 9999
Q ss_pred EEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC---chHH----HHHHHHHhhcccc-CCHHHHHHHHHHHHHHHH
Q 041590 126 AQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT---SSSD----LAAEMAAASIVFK-DNEEYSKKLIHSAIMIFK 197 (493)
Q Consensus 126 ~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~---~~~d----~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~ 197 (493)
+||||+.. ||.+|++||+++++|++|.++ |+++ +||++|+|||||| +||+||++||++||++|+
T Consensus 182 ~qVgdg~~--------Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~ 253 (611)
T 2yik_A 182 HQVGDGDI--------DHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFD 253 (611)
T ss_dssp EEESCHHH--------HTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCc--------cccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHH
Confidence 99999977 999999999999999998774 6655 5666777999999 999999999999999999
Q ss_pred HHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHhCChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHH
Q 041590 198 FSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTA 277 (493)
Q Consensus 198 ~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~ 277 (493)
||++||+.|.++.+.++++|+|+++.||++|||+|||+|||+++|+++++++.. .+. ...+.|+|+++..+++
T Consensus 254 fA~~~~~~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~-----~~~--~~~~~~~Wd~~~~g~~ 326 (611)
T 2yik_A 254 FAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYYD-----YYA--PPGWIHCWNDVWSGTA 326 (611)
T ss_dssp HHHHSCCCCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCC-----TTS--TTTSCSBTTBCHHHHH
T ss_pred HHHHcCCcccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHH-----Hhc--cCCccCccccchHHHH
Confidence 999999999877777789999999999999999999999999999999998642 111 2245799999999999
Q ss_pred HHHHHHHHhhcCCCChHHHHHHHHHHHHHH----------HHhhcCC--CCCCccCCCCcchhhhhhhhhcCCCCCChHH
Q 041590 278 LLLSRLRLLLNLGYPYDEMLRAFHNQTAIT----------MCSYLPN--FSSWNATKAKLSFSFYRRLIQLNHGRPQPLQ 345 (493)
Q Consensus 278 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~--~~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~ 345 (493)
+||++++..... ....+.+.|++.++.. +|..++. ....++||+| +.+.. .||||+
T Consensus 327 ~lLa~~~~~~~~--~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~G--------l~~~~--~WGs~~ 394 (611)
T 2yik_A 327 CILAEINDLYDK--DSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGG--------YVFLN--QWGSAR 394 (611)
T ss_dssp HHHHHHHHHHST--TSSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTS--------CBCSC--STTHHH
T ss_pred HHHHhccccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCcc--------ccccC--CCchHH
Confidence 998886531110 0112245566665543 1211111 1345789999 66644 489999
Q ss_pred HHHHHHHHHHHHHHHH-------HHHHHHhchhhccCCCCCCceEeeeCCCCCCCcccCCCCCCCCcccccccCCccccc
Q 041590 346 YVTNAAFLASLFSNCL-------SCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRD 418 (493)
Q Consensus 346 ~~~n~a~l~~~~~~~~-------~~~a~~qidYiLG~Np~~~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~ 418 (493)
|++|++|++++|++++ ++||++|||||||+||+++|||||||+|+|++||||+++|+.+ .+
T Consensus 395 ~~~~~afl~~~ya~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~------------~~ 462 (611)
T 2yik_A 395 YNTAAQLIALVYDKHHGDTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKD------------AN 462 (611)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCSC------------TT
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCccc------------cc
Confidence 9999999999999875 6899999999999999999999999999999999999988631 34
Q ss_pred CCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHHHHHHhhcCCCC
Q 041590 419 SSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGKKST 474 (493)
Q Consensus 419 ~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~~ 474 (493)
.|.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|....+.
T Consensus 463 ~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~ 518 (611)
T 2yik_A 463 DSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD 518 (611)
T ss_dssp CCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcCC
Confidence 67889999999999999999999999999999999999999999999999986543
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=4.8e-99 Score=825.36 Aligned_cols=404 Identities=29% Similarity=0.463 Sum_probs=350.8
Q ss_pred CCCcccccC--------------CCCCCCCCccCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHH
Q 041590 19 SPNYTLDTR--------------PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVI 84 (493)
Q Consensus 19 ~~~y~~al~--------------p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~ 84 (493)
.+||+++|+ |+++|++||++|||.||+.. ++||+|||||||||+||++|+|+|+++|+|+++
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~----~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~ 78 (614)
T 1g87_A 3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDV----GVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLY 78 (614)
T ss_dssp CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccc----cccCCCCeeeCCCCcEeccccHHHHHHHHHHHH
Confidence 468999998 88999999999999999866 999999999999999999999999999999999
Q ss_pred HhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC--
Q 041590 85 EYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT-- 162 (493)
Q Consensus 85 e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~-- 162 (493)
||++.|++++++||||||||||+|||||||+.+ +.||+||||+.. ||.+|++||.++.+|++|.++
T Consensus 79 e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~~~~~r~~y~v~~~ 146 (614)
T 1g87_A 79 EDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTP----GVYYYQVGDGGK--------DHSWWGPAEVMQMERPSFKVDAS 146 (614)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEECSS
T ss_pred HhHHHHhhCCChHHHHHHHHHHHHHHHHhccCC----CcEEEEecCCCc--------CccccCCcccCCCCCcceEecCC
Confidence 999999999999999999999999999999887 999999999876 999999999999999999876
Q ss_pred -chHH----HHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHH
Q 041590 163 -SSSD----LAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYA 236 (493)
Q Consensus 163 -~~~d----~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~A 236 (493)
|+++ +||+||+|||||| +||+||++||++||++|+||++||+.+. .+..+++|+|+++.||++|||+|||+|
T Consensus 147 ~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~ss~~~DEl~WAAawLy~A 224 (614)
T 1g87_A 147 KPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAG--YTAASGYYSSSSFYDDLSWAAVWLYLA 224 (614)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSCSHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCcCcCCcCCCCchhHHHHHHHHHHHH
Confidence 6666 4666677999999 9999999999999999999999999763 344678999999999999999999999
Q ss_pred hCChhhHHHHHhcccCCccc-cccCcCCCCccCCCchHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHhhcCCC
Q 041590 237 TGNSSYLKLVTTTGLGKQAG-IFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNF 315 (493)
Q Consensus 237 TGd~~Yl~~a~~~~~~~~~~-~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (493)
||+++|+++++++....... ........+.|+||+|..++++||++++ . ...|++.++..++.+++..
T Consensus 225 Tgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~~~~~~~~ 293 (614)
T 1g87_A 225 TNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT---N--------KQLYKDSIEMNLDFWTTGV 293 (614)
T ss_dssp HCCHHHHHHHHHTGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHH---C--------CHHHHHHHHHHHHHHTTCB
T ss_pred hCCHHHHHHHHHHHHhhccccccccccccCCcCccchHHHHHHHHHhcc---C--------cHHHHHHHHHHHHHhhhcc
Confidence 99999999999864210000 0000112357999999999999998763 1 1357777877777666432
Q ss_pred --CCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH----------HHHHHHhchhhccCCCCCCceE
Q 041590 316 --SSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL----------SCWFTWMIDYILGNNPQKMSYL 383 (493)
Q Consensus 316 --~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~----------~~~a~~qidYiLG~Np~~~SyV 383 (493)
..+++||+| |++.. .|||++|++|++||+++|++++ ++||++|||||||+| ++|||
T Consensus 294 ~~~~~~~tp~G--------l~~~~--~Wgs~~~~~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~n--~~Syv 361 (614)
T 1g87_A 294 NGTRVSYTPKG--------LAWLF--QWGSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGST--GRSFV 361 (614)
T ss_dssp TTBCCEECTTS--------CEECC--SSSHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHTTT--SSCCB
T ss_pred CCCccccCCCC--------ceecc--CCCcHHHHHHHHHHHHHHHHhhCCCccCHHHHHHHHHHHHHHhcCCC--CcceE
Confidence 345789999 77665 4899999999999999999863 588999999999998 68999
Q ss_pred eeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHH
Q 041590 384 VGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVA 463 (493)
Q Consensus 384 ~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~ 463 (493)
||||+|+|++||||+++|+... +.+.|.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||+
T Consensus 362 vG~G~~~p~~pHHR~ss~~~~~----------~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~ 431 (614)
T 1g87_A 362 VGYGVNPPQHPHHRTAHGSWTD----------QMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTG 431 (614)
T ss_dssp TTSSSSCCSCCBCHHHHTCSSS----------CTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHH
T ss_pred eccCCCCCCCCcchhhccCccc----------cccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHH
Confidence 9999999999999999886421 234678899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCC
Q 041590 464 ALVALSGKKS 473 (493)
Q Consensus 464 ~la~l~~~~~ 473 (493)
+||+|....+
T Consensus 432 ~lA~l~~~~~ 441 (614)
T 1g87_A 432 ALAKMYKHSG 441 (614)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998654
No 7
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=3.3e-91 Score=754.16 Aligned_cols=396 Identities=17% Similarity=0.174 Sum_probs=324.5
Q ss_pred CcccccC---------------CCCCCCCCccCCCC-CCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHH
Q 041590 21 NYTLDTR---------------PSCSSMPNDGDSCL-TDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVI 84 (493)
Q Consensus 21 ~y~~al~---------------p~~~~~~Wr~~s~l-~Dg~~~~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~wa~~ 84 (493)
+|.++|+ |.++|++||+++|+ +|+...+...++||+|||||||||+||++|+|+|+++|+|+++
T Consensus 87 ~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L~~a~~ 166 (537)
T 3gzk_A 87 AYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLLLAHE 166 (537)
T ss_dssp TTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHHHHHHH
Confidence 7888877 67789999988775 5553333346899999999999999999999999999999999
Q ss_pred HhHHHHh-------hcCC--hHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCC
Q 041590 85 EYRAKYE-------AAGE--LNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYD 155 (493)
Q Consensus 85 e~~~~~~-------~~~~--~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~ 155 (493)
+|++.|+ ++|+ +||||||||||+|||||||++++ |.+|+|||+..+ +..|.+||+++.+
T Consensus 167 ~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~---g~~y~~v~~~~w---------~g~~~~Pe~~~~~ 234 (537)
T 3gzk_A 167 YFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPAT---GGVYHKVTTPSF---------PPLDTRPEDDDAP 234 (537)
T ss_dssp HCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTT---CCBBSEEECSSC---------CCTTCCGGGCCSC
T ss_pred HhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCC---CeEEEEecCCCc---------CCCCcCcccCCCc
Confidence 9999996 3678 99999999999999999998543 899999998643 1234799999999
Q ss_pred ccccccC--chHHHHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCcccccccCCCCchhHHHHHHH
Q 041590 156 RPVQECT--SSSDLAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGRY-SAGGVEAGWFYNSRSYWDEFTWSGA 231 (493)
Q Consensus 156 R~~~~~~--~~~d~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~y-~~~~~~~~~~Y~s~~~~De~~wAAa 231 (493)
|++++++ .+.++||++|+|||||| +||+||++||++||++|+||++||+.+ .++.....++|+++++.||++|||+
T Consensus 235 R~~~~~~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~ 314 (537)
T 3gzk_A 235 LVLSPISYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASC 314 (537)
T ss_dssp EEECCBCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHH
T ss_pred ceEeecCCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHH
Confidence 9999988 46778999999999999 999999999999999999999999975 3444456789999999999999999
Q ss_pred HHHHHhCChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHHHHH--HHHHHhhcCCCChHHHHHHHHHHHHHHHH
Q 041590 232 WLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLL--SRLRLLLNLGYPYDEMLRAFHNQTAITMC 309 (493)
Q Consensus 232 eLy~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (493)
|||+|||+++|+++++++.. . .+ ...|+||+|..++++.| ++++. .++ ...+++++.+++.++.++.
T Consensus 315 ~Ly~aTgd~~Yl~~a~~~~~---~-~~-----~~~~~Wd~~~~~~~~~ll~~~~~~-~~~-~~~~~~~~~~~~~ad~~~~ 383 (537)
T 3gzk_A 315 ALLRMTGDSAWARVCEPLLD---L-DL-----PWELGWADVALYGVMDYLRTPRAA-VSD-DVRNKVKSRLLRELDALAA 383 (537)
T ss_dssp HHHHHHCCGGGHHHHHHHHH---S-CC-----CCCCSSSCCHHHHHHHHHTSCGGG-SCH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhhh---c-cC-----CCccchHHhHHHHHHHHHhCcccc-CCH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998652 1 11 24799999998877633 22110 010 0012333444444444321
Q ss_pred hhcCCCCCCccCCCCcchhhhhhhhhcC-CCCCChHHHHHHHHHHHHHHHHHH-----HHHH-HHhchhhccCCCCCCce
Q 041590 310 SYLPNFSSWNATKAKLSFSFYRRLIQLN-HGRPQPLQYVTNAAFLASLFSNCL-----SCWF-TWMIDYILGNNPQKMSY 382 (493)
Q Consensus 310 ~~~~~~~~~~~t~~G~~~~~y~~l~~~~-~~~wgs~~~~~n~a~l~~~~~~~~-----~~~a-~~qidYiLG~Np~~~Sy 382 (493)
. .+.+|+| +.+.. .+.||||++++|.+|+++++.++. .+++ ++|||||||+||+++||
T Consensus 384 -~------~~~~~~g--------~~~~~~~~~WGsn~~~~n~a~~l~~a~~~~~~~~y~~~aa~~qidYiLG~NP~~~Sy 448 (537)
T 3gzk_A 384 -M------AESHPFG--------IPMRDDDFIWGSNMVLLNRAMAFLLAEGVGVLHPAAHTVAQRAADYLFGANPLGQCY 448 (537)
T ss_dssp -H------HHHSTTC--------CSCCGGGCCTTHHHHHHHHHHHHHHHGGGTCCCTTHHHHHHHHHHHHBTCSTTCCBC
T ss_pred -h------ccCCCCc--------eeecCCCCcccchHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHhcCCCCCCcee
Confidence 1 2457777 33322 246899999999999999999887 6888 99999999999999999
Q ss_pred EeeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCC----------------CCcccccC
Q 041590 383 LVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKH----------------DGFHDVRS 446 (493)
Q Consensus 383 V~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~----------------d~y~D~~~ 446 (493)
|||||+|+|++||||.++|+ .+++++||+||||||.. |+|.|+|.
T Consensus 449 VvG~G~~~p~~pHHR~s~~~-------------------~~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D~~~ 509 (537)
T 3gzk_A 449 VTGFGQRPVRHPHHRPSVAD-------------------DVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQD 509 (537)
T ss_dssp BBTCSSSCBCSCBCHHHHHH-------------------CTTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCCCTT
T ss_pred EecCCCCCCCCCcchhhhcC-------------------CCCCCCCCCCccCCCcccccchhhhcccCCCcccCcCCCCc
Confidence 99999999999999998643 12467999999999976 79999999
Q ss_pred cccccccccccchHHHHHHHHhhcCCC
Q 041590 447 NYNYTVPTLHDNAGLVAALVALSGKKS 473 (493)
Q Consensus 447 ~y~~NEvaId~NA~lv~~la~l~~~~~ 473 (493)
+|++||||||||||||++||+|.+..+
T Consensus 510 ~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 510 SYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp CHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred cccccccchHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998764
No 8
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=4.1e-90 Score=759.06 Aligned_cols=399 Identities=17% Similarity=0.203 Sum_probs=328.3
Q ss_pred CcccccC---------------CCCCCCC-CccCCCCCCCCCC----CCCccccccccccccCCCcccccchHHHHHHHH
Q 041590 21 NYTLDTR---------------PSCSSMP-NDGDSCLTDGKFD----SSGITNDLLGGYYDAGDAIKFHFPASFNMTMLS 80 (493)
Q Consensus 21 ~y~~al~---------------p~~~~~~-Wr~~s~l~Dg~~~----~~~~~~dlsGGWyDAGDy~Ky~~~~a~tv~~L~ 80 (493)
+|.++|+ |+++|++ ||++||+.|+... +.+.++||+|||||||||+||++|+|+++++|+
T Consensus 128 ~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t~~~L~ 207 (639)
T 1clc_A 128 VYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGITVGSMF 207 (639)
T ss_dssp TTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHHHHHHH
Confidence 8999988 7788998 9999998877421 145699999999999999999999999999999
Q ss_pred HHHHHhHHHHhh--------cCChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCC
Q 041590 81 WSVIEYRAKYEA--------AGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGI 152 (493)
Q Consensus 81 wa~~e~~~~~~~--------~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~ 152 (493)
|+++||++.|++ +|+++|+|||||||+|||||||.+.+ .|.+|+|||+..+ ||. .+||++
T Consensus 208 w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~--~g~~y~~vgd~~~--------~~~--~~Pe~~ 275 (639)
T 1clc_A 208 LAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDG--SGRVAHKVSTRNF--------GGF--IMPENE 275 (639)
T ss_dssp HHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTS--SCCBEEEEECSSC--------CCS--CCGGGC
T ss_pred HHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccC--CCeEEEEecCCCC--------CCC--CCchhc
Confidence 999999999986 89999999999999999999987541 0689999999877 775 899999
Q ss_pred CCCccccccC--chHHHHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCcccccccCCCCchhHHHH
Q 041590 153 DYDRPVQECT--SSSDLAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQYRGR-YSAGGVEAGWFYNSRSYWDEFTW 228 (493)
Q Consensus 153 ~~~R~~~~~~--~~~d~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~~~~-y~~~~~~~~~~Y~s~~~~De~~w 228 (493)
+.+|++++++ .+.++||+||+|||||| +||+||++||++||++|+||++||+. |.++.+..+++|+|+++.||++|
T Consensus 276 ~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DEl~W 355 (639)
T 1clc_A 276 HDERFFVPWSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLW 355 (639)
T ss_dssp CSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHHHHH
T ss_pred CCCceEecCCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchHHHH
Confidence 9999999877 46778899999999999 99999999999999999999999998 56655567889999999999999
Q ss_pred HHHHHHHHhCChhhHHHHHhcccCCccccccCcCCCCccCCCchHHHHHHHHH-HHHHhhcCCCChHHHHHHHHHHHHHH
Q 041590 229 SGAWLYYATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLS-RLRLLLNLGYPYDEMLRAFHNQTAIT 307 (493)
Q Consensus 229 AAaeLy~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (493)
||+|||+|||+++|++++++++. .+. ......|+|+++..+++++|+ +.....++. ..+..++.+++.++.+
T Consensus 356 AAawLy~ATgd~~Yl~~a~~~~~-----~~~-~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~a~~~ 428 (639)
T 1clc_A 356 AAAEMWETLGDEEYLRDFENRAA-----QFS-KKIEADFDWDNVANLGMFTYLLSERPGKNPA-LVQSIKDSLLSTADSI 428 (639)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHH-----TCS-SSCCSSCCTTCCHHHHHHHHHHCCCSCCCHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHH-----hhc-cccCCCCCchhhHHHHHHHHHhhhhhccChH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999997641 111 011233599999999888876 211000100 0122334444444444
Q ss_pred HHhhcCCCCCCccCCCCcchhhhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH-----HHHHHHhchhhccCCCCCCce
Q 041590 308 MCSYLPNFSSWNATKAKLSFSFYRRLIQLNHGRPQPLQYVTNAAFLASLFSNCL-----SCWFTWMIDYILGNNPQKMSY 382 (493)
Q Consensus 308 ~~~~~~~~~~~~~t~~G~~~~~y~~l~~~~~~~wgs~~~~~n~a~l~~~~~~~~-----~~~a~~qidYiLG~Np~~~Sy 382 (493)
++. .+.+|+|+++ ...+.||||++++|.+|+++++.++. ++||++|||||||+||+++||
T Consensus 429 ~~~-------~~~~~~g~~~--------~~~~~WGsn~~~~~~a~~~~~a~~l~~~~~~~~~A~~qidYiLG~NP~~~Sy 493 (639)
T 1clc_A 429 VRT-------SQNHGYGRTL--------GTTYYWGCNGTVVRQTMILQVANKISPNNDYVNAALDAISHVFGRNYYNRSY 493 (639)
T ss_dssp HHH-------HHTSTTCCTT--------TTCCCTTHHHHHHHTHHHHHHHHHHSCCHHHHHHHHHHHHHHHTCSTTCCCS
T ss_pred HHh-------ccCCCCCccc--------CCCCCCchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhccCCCCCCceE
Confidence 432 2457777322 12246899999999999999987765 789999999999999999999
Q ss_pred EeeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCC-CCCcccccCcccccccccccchHH
Q 041590 383 LVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHK-HDGFHDVRSNYNYTVPTLHDNAGL 461 (493)
Q Consensus 383 V~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~-~d~y~D~~~~y~~NEvaId~NA~l 461 (493)
|||||.|+|++||||.+++. | .+++++|+||||||. .|+|.|+|.+|++|||+|||||+|
T Consensus 494 vvG~G~~~p~~pHHR~s~~~----------~---------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~~nA~~ 554 (639)
T 1clc_A 494 VTGLGINPPMNPHDRRSGAD----------G---------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAINWNAAL 554 (639)
T ss_dssp BTTSSSSCCSSCBCHHHHHS----------S---------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHHHHHHH
T ss_pred EEecCCCCCCCCcchhhccC----------C---------CCCCCCeeeecCCCccccccccCcccceeccccccchHHH
Confidence 99999999999999976532 1 136799999999999 999999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 041590 462 VAALVALSGKK 472 (493)
Q Consensus 462 v~~la~l~~~~ 472 (493)
+++++++....
T Consensus 555 v~~la~~~~~~ 565 (639)
T 1clc_A 555 IYALAGFVNYN 565 (639)
T ss_dssp HHHHHTTTTCC
T ss_pred HHHHHHhhhcc
Confidence 99999988654
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=4.8e-87 Score=732.16 Aligned_cols=419 Identities=16% Similarity=0.159 Sum_probs=328.3
Q ss_pred CcccccC-----------------CCCCCCCCccCCCCCC---------CCC---------C-CCCccccccccccccCC
Q 041590 21 NYTLDTR-----------------PSCSSMPNDGDSCLTD---------GKF---------D-SSGITNDLLGGYYDAGD 64 (493)
Q Consensus 21 ~y~~al~-----------------p~~~~~~Wr~~s~l~D---------g~~---------~-~~~~~~dlsGGWyDAGD 64 (493)
+|.++|+ |..++++||+++|+.| +.. . +.+.++||+||||||||
T Consensus 100 ~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwyDAGD 179 (609)
T 1ut9_A 100 IYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYDAGD 179 (609)
T ss_dssp TTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBCCSSS
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCeeeCCC
Confidence 6888877 5557788998866544 100 0 12558999999999999
Q ss_pred CcccccchHHHHHHHHHHHHHhHH-------HH--------hhcCChHHHHHHHHHHHHHHhhccccccCccC--eEEEE
Q 041590 65 AIKFHFPASFNMTMLSWSVIEYRA-------KY--------EAAGELNHVKEIIKWGTDYLLKTFNHSADSIS--RIIAQ 127 (493)
Q Consensus 65 y~Ky~~~~a~tv~~L~wa~~e~~~-------~~--------~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~--~~y~q 127 (493)
|+||++|+++++++|++.|++++. .| +++|+++|||||||||+|||||||..++ . .+|.|
T Consensus 180 ~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g---~~~~~~g~ 256 (609)
T 1ut9_A 180 HGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEK---EDPSIAGM 256 (609)
T ss_dssp SCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTT---TCGGGTTC
T ss_pred CCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCC---CcceEEEE
Confidence 999999999999999988998764 23 3468899999999999999999998762 2 77888
Q ss_pred ecCCCCCCCCCCCCCCCCc---CCCCCCCCCccccccC--chHHHHHHHHHhhcccc-CCHHHHHHHHHHHHHHHHHHHh
Q 041590 128 VGVGDISGGNKIPNDLYCW---IRPEGIDYDRPVQECT--SSSDLAAEMAAASIVFK-DNEEYSKKLIHSAIMIFKFSRQ 201 (493)
Q Consensus 128 Vgd~~~~~~~~~~~Dh~~w---~~Pe~~~~~R~~~~~~--~~~d~Aa~~AaAs~v~k-~D~~yA~~~l~~A~~~~~~a~~ 201 (493)
||+... ||..| .+||+++++|++...+ .+.++||+||+|||||| +||+||++||++||++|+||++
T Consensus 257 v~~~~~--------D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~ 328 (609)
T 1ut9_A 257 VHHKIH--------DFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALK 328 (609)
T ss_dssp EECEEE--------ESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCC--------CcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 887755 89766 4899999999986544 45677888999999999 9999999999999999999999
Q ss_pred cCCCCCCCCc----ccccccCCCCchhHHHHHHHHHHHHhCChhhHHHHHhcccCCc-ccccc------C--cCCCCccC
Q 041590 202 YRGRYSAGGV----EAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTGLGKQ-AGIFR------G--ILDNSLLS 268 (493)
Q Consensus 202 ~~~~y~~~~~----~~~~~Y~s~~~~De~~wAAaeLy~ATGd~~Yl~~a~~~~~~~~-~~~~~------~--~~~~~~~~ 268 (493)
||+.|.+..+ .++++|+|+++.||++|||+|||+||||++|+++++++..... ...+. + ......|+
T Consensus 329 ~~~~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 408 (609)
T 1ut9_A 329 HPDIYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFT 408 (609)
T ss_dssp CTTCCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCC
T ss_pred CcccccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccc
Confidence 9999976532 3478999999999999999999999999999999998642100 00111 0 11234799
Q ss_pred CCchHHHHHHHHHHHHHhhcCCCCh---HHHHHHHHHHHHHHHHhhcCCC-----CCCccCCCCcchhhhhhhhhcCCCC
Q 041590 269 WDNMPAGTALLLSRLRLLLNLGYPY---DEMLRAFHNQTAITMCSYLPNF-----SSWNATKAKLSFSFYRRLIQLNHGR 340 (493)
Q Consensus 269 Wd~~~~~~~~ll~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~t~~G~~~~~y~~l~~~~~~~ 340 (493)
||+|..+++++|++++. ..+. +..++.++..++.++|...+.. ....+||+| + .
T Consensus 409 Wd~~~~~~~~lla~~~~----~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg--------~------~ 470 (609)
T 1ut9_A 409 WGTTQGLGTITLALVEN----GLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGG--------Y------P 470 (609)
T ss_dssp SSCCHHHHHHHHHHSCC----SSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCS--------C------C
T ss_pred hhhhHHHHHHHHHhccc----ccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCC--------c------c
Confidence 99999999999875321 1111 2334556666677776544321 112346666 2 5
Q ss_pred CChHHHHHHHHHHHHHHHHHH-----HHHHHHhchhhccCCCCCCceEeeeCCCCCCCcccCCCCCCCC----ccccccc
Q 041590 341 PQPLQYVTNAAFLASLFSNCL-----SCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKN----KIKYSCK 411 (493)
Q Consensus 341 wgs~~~~~n~a~l~~~~~~~~-----~~~a~~qidYiLG~Np~~~SyV~G~G~~~p~~pHHR~s~~~~~----~~~~~c~ 411 (493)
||||+|++|++|+++++.+++ .++|++|||||||+||+++|||||||+|+|++||||+++.+.+ ..+..|.
T Consensus 471 WGs~~~~~n~a~~~~~a~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l 550 (609)
T 1ut9_A 471 WGSNSFILNQMIVMGYAYDFTGDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGII 550 (609)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCB
T ss_pred cccCHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCC
Confidence 899999999999999988877 6889999999999999999999999999999999998553221 1234565
Q ss_pred CCcccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccccchHHHHHHHHhhcC
Q 041590 412 RGWKWRDSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAALVALSGK 471 (493)
Q Consensus 412 ~g~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 471 (493)
.|. -++..+++++ .|++||||+..++|.|+|.+|++|||||||||+||++||+|.+.
T Consensus 551 ~Gg--p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 551 SGG--PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CCC--CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 442 3334455555 89999999999999999999999999999999999999999753
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.4e-58 Score=499.10 Aligned_cols=385 Identities=17% Similarity=0.165 Sum_probs=259.0
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCcccccccccccc-CCCcccccchHHHH-------HHHHHHHHHhHHHHhhcC-----
Q 041590 28 PSCSSMPNDGDSCLTDGKFDSSGITNDLLGGYYDA-GDAIKFHFPASFNM-------TMLSWSVIEYRAKYEAAG----- 94 (493)
Q Consensus 28 p~~~~~~Wr~~s~l~Dg~~~~~~~~~dlsGGWyDA-GDy~Ky~~~~a~tv-------~~L~wa~~e~~~~~~~~~----- 94 (493)
|.+++++||++ +.++||+|||||| |||+||++|+|+|+ ++|+|+++++.+.+....
T Consensus 119 ~~d~~~~~~~~-----------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ~~~~~w~ll~~~~~~~~~~~~~~~ 187 (586)
T 3h7l_A 119 QQDRQVPVLNA-----------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNILKGLSLLEGSEDIAAF 187 (586)
T ss_dssp HHTTSEEETTT-----------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCCHHHHHHHHHHHHHHSTTSSSSCHH
T ss_pred CCCceeeecCC-----------CceeecccccccCCCCcceeccchhhhhhcccchhhHHHHHHHHHHHHhhhhccCccc
Confidence 56888999885 1289999999999 99999999999887 577888777777665432
Q ss_pred ChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCC--cCCCCCCCCCccccccCc-hHHHHHHH
Q 041590 95 ELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYC--WIRPEGIDYDRPVQECTS-SSDLAAEM 171 (493)
Q Consensus 95 ~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~--w~~Pe~~~~~R~~~~~~~-~~d~Aa~~ 171 (493)
+++|||||||||+|||||||+++ |.||+||||. +.. .+ .+..+ ..+|+.++.+|+....++ +...||++
T Consensus 188 ~~~~lldE~rWg~D~llkm~~~~----g~~y~qVgd~-W~~-d~--~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAAL 259 (586)
T 3h7l_A 188 TRTRLIEEALFGADFLVRMQNEK----GFFYMTVFDK-WSK-DT--AQREICAYETQLGHKFDDYQAGFRQGGGVAIAAL 259 (586)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCTT----SCBBCEEECT-TCC-CG--GGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhcccCC----CeEEEEecCC-CCC-CC--CccccccccCCCCCCCcceecCCCCcHHHHHHHH
Confidence 38999999999999999999988 9999999997 310 01 01111 234544444554443333 34468888
Q ss_pred HHhhccccCCHHH-HHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHH--HHHHHHHHHHhCChhhHHHHHh
Q 041590 172 AAASIVFKDNEEY-SKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEF--TWSGAWLYYATGNSSYLKLVTT 248 (493)
Q Consensus 172 AaAs~v~k~D~~y-A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~--~wAAaeLy~ATGd~~Yl~~a~~ 248 (493)
|+|||||+ |++| +++||++|+++|+|+++||+.|..+ +++++.||+ +|||+|||+|||+++||+++++
T Consensus 260 A~Asrvf~-d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--------g~~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~ 330 (586)
T 3h7l_A 260 AAASRLGV-HGEYDQQKYRNAAENGYWHLKEHNTQYLND--------GEENIIDEYCALLASVELFKATKETRYLEESRL 330 (586)
T ss_dssp HHHTTSSS-CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--------SCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHhcccC-CCCcChHHHHHHHHHHHHHHHhcCccccCC--------CCccchhHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999998 7888 8999999999999999998876432 236789999 9999999999999999999987
Q ss_pred cccCCccccccCcCCCCccCCCc------------hHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHH--HhhcCC
Q 041590 249 TGLGKQAGIFRGILDNSLLSWDN------------MPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITM--CSYLPN 314 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~Wd~------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 314 (493)
+.... ...|.. .....+.|.. ...++.+.|+++..........+.+.+.++..++-.+ ...+..
T Consensus 331 ~a~~l-~~~~~~-~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~n 408 (586)
T 3h7l_A 331 WAQRL-VARQMS-DEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTN 408 (586)
T ss_dssp HHHHH-HTTEEC-CSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHH-HHhccC-CccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccC
Confidence 53110 011110 1123466663 4445555454443222211112233333333332111 111110
Q ss_pred C-C---CCccCCCCcchhhhhhhhhc--CCCCC-ChHHHHHHHHHHHHHHHHHH---------HHHHHHhchhhccCCCC
Q 041590 315 F-S---SWNATKAKLSFSFYRRLIQL--NHGRP-QPLQYVTNAAFLASLFSNCL---------SCWFTWMIDYILGNNPQ 378 (493)
Q Consensus 315 ~-~---~~~~t~~G~~~~~y~~l~~~--~~~~w-gs~~~~~n~a~l~~~~~~~~---------~~~a~~qidYiLG~Np~ 378 (493)
. + ...+...+...+.|+ +... ..++| |||++++|.|++++++++++ .++|++|||||||+||+
T Consensus 409 pfg~~~~~~~~~~~~~~~~y~-~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~qldyiLG~Np~ 487 (586)
T 3h7l_A 409 PFGYPRQYVKGVNESKRDAFF-VAHNNESGYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDALNWIVGLNPY 487 (586)
T ss_dssp SSCCCCEEECCTTSCCEEESS-CCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHBTCSTT
T ss_pred ccccHHHHhhhhccccccccc-cccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhccCCCC
Confidence 0 0 000000111111222 2221 22589 99999999999999998765 47899999999999999
Q ss_pred CCceEeeeCCCCCCCcccCCCCCCCCcccccccCCcccccCCCCCCCCccceeecCCCCC--C----------CcccccC
Q 041590 379 KMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGPHKH--D----------GFHDVRS 446 (493)
Q Consensus 379 ~~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLvGGPn~~--d----------~y~D~~~ 446 (493)
++|||||||+|+|+ ||.+. + .+ .+||.||||||.. | +..|.-.
T Consensus 488 ~~s~v~G~G~~~p~---~r~~~------------~-------~~---~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~ 542 (586)
T 3h7l_A 488 DMCMLDGHGRNNPD---YLPQY------------G-------FF---NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQ 542 (586)
T ss_dssp CCBCBTTSSSCCCC---SBGGG------------T-------BC---CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTT
T ss_pred CCccEEeeCCCCCc---cCccc------------C-------CC---CCCccccCCCCCCcCChhhHhcCcccccccccc
Confidence 99999999999876 78752 1 12 2799999999864 1 2335667
Q ss_pred cccccccccccchHHHHHHHHh
Q 041590 447 NYNYTVPTLHDNAGLVAALVAL 468 (493)
Q Consensus 447 ~y~~NEvaId~NA~lv~~la~l 468 (493)
+|..+|--|-=-|=|..+++.-
T Consensus 543 ~wrw~eqw~ph~~w~l~a~~~~ 564 (586)
T 3h7l_A 543 NWRWGEQWIPHGAWYLLAIMSQ 564 (586)
T ss_dssp THHHHCBBHHHHHHHHHHHHHH
T ss_pred CcccHhhccchHHHHHHHHHHH
Confidence 9999999888766666555543
No 11
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.03 E-value=0.3 Score=50.08 Aligned_cols=121 Identities=14% Similarity=0.058 Sum_probs=65.9
Q ss_pred ChHHHHHHHHHHHHHHhhc-cccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccCchHHHHH-HHH
Q 041590 95 ELNHVKEIIKWGTDYLLKT-FNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAA-EMA 172 (493)
Q Consensus 95 ~~~d~Lde~kwg~d~llk~-~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~d~Aa-~~A 172 (493)
+.++.++.++-+++||++- .+++. |++|..+-++ .|.+ ..+. .-+.|- .+|
T Consensus 69 g~~~~l~~A~~~~~fl~~~~~d~~~---Gg~~~~~~dG----------------~~~~--~~~~------lyd~Af~i~a 121 (402)
T 3gt5_A 69 GTAEYLDAVHHGLSYVRDVHRNPAT---GGYAWTLCDD----------------RVED--DTNH------CYGLAFVMLA 121 (402)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCTTT---SCBCSEEETT----------------EEEE--CCEE------HHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCccCCC---CcEEEEeeCC----------------CCCc--CCcc------hHHHHHHHHH
Confidence 5689999999999999984 33332 5666666222 1110 1121 222222 222
Q ss_pred Hhhcccc-CCHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCC-cc-cccccCCCCchhH--HHHHHHHHHHHhCChhh
Q 041590 173 AASIVFK-DNEEYSKKLIHSAIMIFKFSRQY---R--GRYSAGG-VE-AGWFYNSRSYWDE--FTWSGAWLYYATGNSSY 242 (493)
Q Consensus 173 aAs~v~k-~D~~yA~~~l~~A~~~~~~a~~~---~--~~y~~~~-~~-~~~~Y~s~~~~De--~~wAAaeLy~ATGd~~Y 242 (493)
.+. ..+ .|++ .|+.|+++++...++ | |.|.+.. +. ....|.+ ...- ++-|.+.||++||++.|
T Consensus 122 l~~-~~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~--~n~~m~l~eall~L~~~tgd~~~ 194 (402)
T 3gt5_A 122 YSC-GLKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRG--QNANMHMCEAMLAAYEASGEQRY 194 (402)
T ss_dssp HHH-HHHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEE--HHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHH-HHHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCC--CCHHHHHHHHHHHHHHhhCCHHH
Confidence 222 223 4544 566777777777764 1 2232110 00 0011111 1222 45578999999999999
Q ss_pred HHHHHhc
Q 041590 243 LKLVTTT 249 (493)
Q Consensus 243 l~~a~~~ 249 (493)
++.+++.
T Consensus 195 ~~~a~~l 201 (402)
T 3gt5_A 195 LERALVL 201 (402)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999764
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=92.02 E-value=0.45 Score=48.05 Aligned_cols=141 Identities=9% Similarity=0.008 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhc-cccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCC
Q 041590 74 FNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKT-FNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGI 152 (493)
Q Consensus 74 ~tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~-~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~ 152 (493)
+.-..|+|++.+ +|...-+-+..++.++-+++||++- ++++ |++|+.+...+ .|..
T Consensus 53 ~~nar~i~~~a~---a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~----Gg~~~~~d~dg---------------~~~~- 109 (388)
T 2gz6_A 53 WLQNRQVWTFSM---LCNQLEKRENWLKIARNGAKFLAQHGRDDE----GNWYFALTRGG---------------EPLV- 109 (388)
T ss_dssp HHHHHHHHHHHH---HHHHTCCCHHHHHHHHHHHHHHHHHSBCTT----SCBCSEECTTS---------------CBCC-
T ss_pred HHHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHhcCCCC----CCEEEEEcCCC---------------Cccc-
Confidence 344445555443 2222124578999999999999996 4445 78887773110 1211
Q ss_pred CCCccccccCchHHHHHHHHHhhcccc--CCHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCcccccccCCCCchhHH
Q 041590 153 DYDRPVQECTSSSDLAAEMAAASIVFK--DNEEYSKKLIHSAIMIFKFSRQYR----GRYSAGGVEAGWFYNSRSYWDEF 226 (493)
Q Consensus 153 ~~~R~~~~~~~~~d~Aa~~AaAs~v~k--~D~~yA~~~l~~A~~~~~~a~~~~----~~y~~~~~~~~~~Y~s~~~~De~ 226 (493)
..+.++ +-|-.+.+.+.+++ -|+ ++|+.|++++++..++- +.+....+... .+...+..--+
T Consensus 110 -~~~~~~------~~af~i~al~~~y~~tg~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~-~~~~~~~~~~~ 177 (388)
T 2gz6_A 110 -QPYNIF------SDCFAAMAFSQYALASGEE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTR-PMKALAVPMIL 177 (388)
T ss_dssp -CCCCHH------HHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHTC--------------CC-CCEETHHHHHH
T ss_pred -CCcchH------HHHHHHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHhcCCCcccCcccCCCC-CCCCCCHHHHH
Confidence 112111 22222222233333 455 45777777777776642 22211111101 11111111135
Q ss_pred HHHHHHHHHHhCChhhHHHHHhc
Q 041590 227 TWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 227 ~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
+.|.+.||++|+++.|++.+.+.
T Consensus 178 ~~all~l~~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 178 ANLTLEMEWLLPQETLENVLAAT 200 (388)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH
Confidence 66889999999999999998764
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=88.46 E-value=1.1 Score=45.34 Aligned_cols=64 Identities=16% Similarity=0.121 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHhc---C-CCCCCCCcccccccCC--CCch---hHHHHHHHHHHHHhCChhhHHHHHhcc
Q 041590 187 KLIHSAIMIFKFSRQY---R-GRYSAGGVEAGWFYNS--RSYW---DEFTWSGAWLYYATGNSSYLKLVTTTG 250 (493)
Q Consensus 187 ~~l~~A~~~~~~a~~~---~-~~y~~~~~~~~~~Y~s--~~~~---De~~wAAaeLy~ATGd~~Yl~~a~~~~ 250 (493)
++|+.|+++|+|..++ + +.+.++......-+.. ..|. --++.|+++||++||+++|++.+++..
T Consensus 170 ~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 170 KYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 5788899999998773 2 2232322100001111 1222 147889999999999999999998753
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=87.06 E-value=11 Score=38.17 Aligned_cols=172 Identities=12% Similarity=0.006 Sum_probs=82.1
Q ss_pred ccccccc--CCCcccccchHHHHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhccc-cccCccCeEEEEecCCC
Q 041590 56 LGGYYDA--GDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFN-HSADSISRIIAQVGVGD 132 (493)
Q Consensus 56 sGGWyDA--GDy~Ky~~~~a~tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~-~~~~~~~~~y~qVgd~~ 132 (493)
.||++++ +|...-..+...+...|+.+++...... +-+..++.++.-++.+++-+. +++ +.+...+....
T Consensus 153 ~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~t----gd~~~~~~a~~l~~~~~~~f~~~~~---g~l~e~~~~dw 225 (402)
T 3gt5_A 153 YGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEAS----GEQRYLERALVLADRITRRQAAKAD---GLVWEHYDMRW 225 (402)
T ss_dssp TTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHTHHHHTTT---TSCCSEECTTS
T ss_pred CCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhh----CCHHHHHHHHHHHHHHHHHhhCccC---CeeEEEECCCC
Confidence 4777753 3322101123344444444444333322 336788888888888876432 222 44333432211
Q ss_pred CCCCCCCCCCCCC-cCCCCCCCCCccccccCchHHHH-H-HHHHhhccccCCHHHHHHHHHHHHHHHHHHHhc------C
Q 041590 133 ISGGNKIPNDLYC-WIRPEGIDYDRPVQECTSSSDLA-A-EMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQY------R 203 (493)
Q Consensus 133 ~~~~~~~~~Dh~~-w~~Pe~~~~~R~~~~~~~~~d~A-a-~~AaAs~v~k~D~~yA~~~l~~A~~~~~~a~~~------~ 203 (493)
.+ +..+ ...|.. .-|+ ..++||-++- + .+-.++++. -++ ++++.|+++++++.++ .
T Consensus 226 ~~-------~~~~~~~~~~~--~~~~-~~~~pGH~iE~awlLl~~~~~~-~~~----~~~~~A~~l~~~~~~~gwd~~~G 290 (402)
T 3gt5_A 226 EV-------DWDYNRDNPKH--LFRP-WGFQPGHQTEWAKLLLILDRYI-EVE----WLVPVARSLFDVAVARSWDAVRG 290 (402)
T ss_dssp CB-------CTTTTTTSTTC--SSSC-SSBCHHHHHHHHHHHHHHHHHC-CCT----THHHHHHHHHHHHHHHHBCTTTC
T ss_pred CC-------ccccccCCccc--ccCc-CCCCCChHHHHHHHHHHHHHhh-CcH----HHHHHHHHHHHHHHHhcccCCCC
Confidence 10 1000 011111 1122 2356777662 2 222233433 233 4777777777777653 2
Q ss_pred CCCCCCCcccccccCCCC--chhHHHHHHHHHHHHhCChhhHHHHHhc
Q 041590 204 GRYSAGGVEAGWFYNSRS--YWDEFTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 204 ~~y~~~~~~~~~~Y~s~~--~~De~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
+.+..........=.+.. ..-|.+-|++.||+.||+++|++.+++.
T Consensus 291 g~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~ 338 (402)
T 3gt5_A 291 GLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRL 338 (402)
T ss_dssp SBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 222111011111001111 1347888999999999999999988654
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=75.30 E-value=5.5 Score=39.98 Aligned_cols=65 Identities=20% Similarity=0.313 Sum_probs=40.2
Q ss_pred HHHHHhhccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHH---HHHHHHHHhCChhhHHH
Q 041590 169 AEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTW---SGAWLYYATGNSSYLKL 245 (493)
Q Consensus 169 a~~AaAs~v~k~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~w---AAaeLy~ATGd~~Yl~~ 245 (493)
+.+.-++++. -|++ +++.|++...+.......+ . -.++.||..| |.+.+|++||+++||+.
T Consensus 53 ~~l~d~~~~t-gd~~----y~~~a~~~~~~~~~~~~~~----------~-~~~~~DD~a~~~la~~~aye~t~~~~yL~~ 116 (349)
T 3k7x_A 53 EVRLDAYLRT-KKQA----DLEVAEKTYLHNKNRNGGT----------L-IHDFYDDMLWNALAAYRLYKATGKSIYLED 116 (349)
T ss_dssp HHHHHHHHHH-CCHH----HHHHHHHHHHHHHHHTTSS----------S-CCSBHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHh-CCHH----HHHHHHHHHHHHHhcCCCC----------C-CccCccHHHHHHHHHHHHHHHHCCchHHHH
Confidence 4444455554 3554 4566666666655432111 0 1234577655 88999999999999999
Q ss_pred HHhc
Q 041590 246 VTTT 249 (493)
Q Consensus 246 a~~~ 249 (493)
+++.
T Consensus 117 A~~l 120 (349)
T 3k7x_A 117 AQLV 120 (349)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 16
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=75.17 E-value=16 Score=36.82 Aligned_cols=125 Identities=10% Similarity=-0.059 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHh-hccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccCchHHHHHHHHHhhcc
Q 041590 99 VKEIIKWGTDYLL-KTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIV 177 (493)
Q Consensus 99 ~Lde~kwg~d~ll-k~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~d~Aa~~AaAs~v 177 (493)
+.+|+.=-+.+++ ++++... |+|++.+..... |-. .++.++ -.+-+...+|.|+++
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~---GGf~~~~~~dg~---------------~~~--~~k~l~---~nar~l~~~a~a~~~ 71 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREH---GGFFTCLGRDGR---------------VYD--DLKYVW---LQGRQVWMYCRLYRK 71 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTT---SSBCCCBCTTSC---------------BSC--CCEEHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCCC---CCEeeEECCCCC---------------CCC--Cccchh---hhHHHHHHHHHHHHH
Confidence 4445555677777 6776553 677777643211 110 111111 122234445556777
Q ss_pred c--cCCHHHHHHHHHHHHHHHHHHHhcC----C--CCCCCC-cccccccCCCCc--hhHHHHHHHHHHHHhCChhhHHHH
Q 041590 178 F--KDNEEYSKKLIHSAIMIFKFSRQYR----G--RYSAGG-VEAGWFYNSRSY--WDEFTWSGAWLYYATGNSSYLKLV 246 (493)
Q Consensus 178 ~--k~D~~yA~~~l~~A~~~~~~a~~~~----~--~y~~~~-~~~~~~Y~s~~~--~De~~wAAaeLy~ATGd~~Yl~~a 246 (493)
+ .-++ ++++.|++..+|..++= + .+.... .++...-..... .--++||.++||++||+..|++.+
T Consensus 72 ~~~~~~~----~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A 147 (402)
T 1fp3_A 72 LERFHRP----ELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEA 147 (402)
T ss_dssp CGGGCCH----HHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred hcccCCH----HHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 6 2344 57888888888888751 1 111110 000000000001 113578999999999999999988
Q ss_pred Hhcc
Q 041590 247 TTTG 250 (493)
Q Consensus 247 ~~~~ 250 (493)
.+..
T Consensus 148 ~~l~ 151 (402)
T 1fp3_A 148 VDMM 151 (402)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 17
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=74.86 E-value=3.5 Score=42.38 Aligned_cols=127 Identities=11% Similarity=-0.006 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccCchHHHHHHHHHhhc
Q 041590 97 NHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASI 176 (493)
Q Consensus 97 ~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~d~Aa~~AaAs~ 176 (493)
++.++.+.=.+++|+.-.++. +++....+.. +.|+ +.+ .-++.-.++. .++-|++
T Consensus 133 ~~~~~~~~~aA~~L~~r~~~~----~g~iqsw~~~---------------~~~~----~~~-~iID~~mni~-~L~~A~~ 187 (397)
T 2zzr_A 133 VKALEATIKAADKLMERYQEK----GGFIQAWGEL---------------GYKE----HYR-LIIDCLLNIQ-LLFFAYE 187 (397)
T ss_dssp HHHHHHHHHHHHHHHTTEETT----TTEECCSSST---------------TCGG----GCE-EETTHHHHTH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcC----CCEEEecccC---------------CCCC----CCc-eeechHhHHH-HHHHHHH
Confidence 567788888888888765444 3333222211 0111 111 1233333443 3344577
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcCC-CCCCCC--c-ccccc--cCCCCchhH---------HHHHHHHHHHHhCChh
Q 041590 177 VFKDNEEYSKKLIHSAIMIFKFSRQYRG-RYSAGG--V-EAGWF--YNSRSYWDE---------FTWSGAWLYYATGNSS 241 (493)
Q Consensus 177 v~k~D~~yA~~~l~~A~~~~~~a~~~~~-~y~~~~--~-~~~~~--Y~s~~~~De---------~~wAAaeLy~ATGd~~ 241 (493)
++ -||.|.+...++|+..-+......+ .|..-. + .+... ..-.++.|| +++|-++||++|+|++
T Consensus 188 ~~-gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~ 266 (397)
T 2zzr_A 188 QT-GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQ 266 (397)
T ss_dssp HH-CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHH
T ss_pred Hh-CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHH
Confidence 76 4677777666666666655532111 121100 0 01100 011344444 5678899999999999
Q ss_pred hHHHHHhc
Q 041590 242 YLKLVTTT 249 (493)
Q Consensus 242 Yl~~a~~~ 249 (493)
||+.|++.
T Consensus 267 yL~~A~~l 274 (397)
T 2zzr_A 267 QIILFKGM 274 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 18
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=73.78 E-value=5 Score=40.57 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCChhhHHHHHhc
Q 041590 225 EFTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 225 e~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
|.+.|++.||++||+++|++.+++.
T Consensus 318 ea~~a~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 318 EAMIAFLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 7899999999999999999988764
No 19
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=70.80 E-value=46 Score=32.96 Aligned_cols=26 Identities=19% Similarity=-0.017 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHhCChhhHHHHHhc
Q 041590 224 DEFTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 224 De~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
-|.+-|++.||+.||+++|++.+++.
T Consensus 307 ae~i~a~~~ly~~tgd~~yl~~a~~~ 332 (388)
T 2gz6_A 307 LESLVALAMGYRLTGRDACWAWYQKM 332 (388)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 47888999999999999999987653
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=66.79 E-value=6.9 Score=39.82 Aligned_cols=79 Identities=14% Similarity=0.018 Sum_probs=45.0
Q ss_pred HHHHhhccccCCHHHHHHHHHHHHHHHHHHHhcCCC-CCC---CCcccccc--cCCCCchhH---------HHHHHHHHH
Q 041590 170 EMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGR-YSA---GGVEAGWF--YNSRSYWDE---------FTWSGAWLY 234 (493)
Q Consensus 170 ~~AaAs~v~k~D~~yA~~~l~~A~~~~~~a~~~~~~-y~~---~~~~~~~~--Y~s~~~~De---------~~wAAaeLy 234 (493)
.++-|++++ -|+.|.+...++|+..-+......+. ++. ....+... ..-.++.|| +++|-++||
T Consensus 156 ~L~~A~~~~-gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly 234 (377)
T 2ahf_A 156 LLLWAGEQT-GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNS 234 (377)
T ss_dssp HHHHHHHHH-CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHH
Confidence 445567776 46777666666666665544321121 111 00011110 012344454 567889999
Q ss_pred HHhCChhhHHHHHhc
Q 041590 235 YATGNSSYLKLVTTT 249 (493)
Q Consensus 235 ~ATGd~~Yl~~a~~~ 249 (493)
++|++++||+.+++.
T Consensus 235 ~~T~d~~yL~~A~~l 249 (377)
T 2ahf_A 235 RYLGNADLLETAKRM 249 (377)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHHCChHHHHHHHHH
Confidence 999999999999864
No 21
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=66.74 E-value=9.9 Score=38.86 Aligned_cols=63 Identities=17% Similarity=0.038 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhc-------CCCCCCCCcccccccCCCCc--hhHHHHHHHHHHHHhCChhhHHHHHhc
Q 041590 187 KLIHSAIMIFKFSRQY-------RGRYSAGGVEAGWFYNSRSY--WDEFTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 187 ~~l~~A~~~~~~a~~~-------~~~y~~~~~~~~~~Y~s~~~--~De~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
++++.|+++++++.++ .|.+..........=....+ .-|.+-|++.||+.||+++|++.+++.
T Consensus 273 ~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~ 344 (421)
T 2zbl_A 273 WLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKW 344 (421)
T ss_dssp HHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5788888888887652 23222111000000001111 347888999999999999999988754
No 22
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=65.57 E-value=7.9 Score=39.03 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHH---HHHHHHhCChhhHHHHHhc
Q 041590 187 KLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSG---AWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 187 ~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAA---aeLy~ATGd~~Yl~~a~~~ 249 (493)
++++.|+++.++...+|.. ..+.-.....|+...+.|.++.+. ++|++.||+++|++.+.+.
T Consensus 107 ~yl~~a~~la~~l~~~~r~-~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~ 171 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT-SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQ 171 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC-TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC-CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 4677777777777666521 011000111223344778876655 6888899999999999763
No 23
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=53.72 E-value=70 Score=32.44 Aligned_cols=115 Identities=19% Similarity=0.186 Sum_probs=66.2
Q ss_pred ChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccCchHHHHHHHHHh
Q 041590 95 ELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAA 174 (493)
Q Consensus 95 ~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~d~Aa~~AaA 174 (493)
+.+.+++.++=.++|+++.+..+ +.+| +. .+ ...++.+.-+...+-++-....+
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~-------------g~wp-------~~----~~--~~~~~~~~wChG~~Gi~~~l~~~ 301 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPS-------------GNYP-------PC----IG--DNRDLLVHWCHGAPGVIYMLIQA 301 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTT-------------SCCC-------SB----TT--CCCCCCCSSSSSHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhccC-------------CCCC-------CC----CC--cccCccccccCCcHHHHHHHHHH
Confidence 45778899999999999985432 1121 00 01 11223333343333334344445
Q ss_pred hccccCCHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHhCChhhHHHHHhcc
Q 041590 175 SIVFKDNEEYSKKLIHSAIMIFKFSR--QYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLVTTTG 250 (493)
Q Consensus 175 s~v~k~D~~yA~~~l~~A~~~~~~a~--~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~ATGd~~Yl~~a~~~~ 250 (493)
++++ .|+++-+.+.+.++..|+... +.++. .-+.+ =....-..||+.|++++|++.+.+..
T Consensus 302 ~~~~-~~~~~~~~a~~~~~~~~~~g~~~~~~~l----------ChG~a----G~~~~ll~~~~~t~~~~~~~~A~~~~ 364 (411)
T 3e6u_A 302 YKVF-REEKYLCDAYQCADVIWQYGLLKKGYGL----------CHGSA----GNAYAFLTLYNLTQDMKYLYRACKFA 364 (411)
T ss_dssp HHHH-CCHHHHHHHHHHHHHHHHHCSBTTCSCS----------TTSHH----HHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHc-CCHHHHHHHHHHHHHHHhcCccCCCCce----------ecChH----HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5655 467887777777777776421 11111 11111 13567788999999999999987653
No 24
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=48.92 E-value=51 Score=34.19 Aligned_cols=114 Identities=12% Similarity=-0.014 Sum_probs=66.6
Q ss_pred CChHHHHHHHHHHHHHHhhccccccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCccccccC-chHHHHHHHH
Q 041590 94 GELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEGIDYDRPVQECT-SSSDLAAEMA 172 (493)
Q Consensus 94 ~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~-~~~d~Aa~~A 172 (493)
.+.+.+++.++=-++.|++.|+++ ++++||=|. |+ .|.-+ .++-+|-.++
T Consensus 287 ~~r~~l~~~~~~~a~~l~~~Q~~~-----G~W~~vld~-----------------~~-------~y~EsSaTAmfaygll 337 (445)
T 3k11_A 287 PQRPKVMDYFRAHVRGVTALQSGE-----GFWHQLLDC-----------------ND-------SYLETSATAIYVYCLA 337 (445)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCTT-----SCEESBTTC-----------------TT-------SCEEHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCC-----CchhhccCC-----------------CC-------CCCCccHHHHHHHHHH
Confidence 467889999999999999999753 467775321 21 12222 3444454555
Q ss_pred HhhccccCCHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCcccc------cccCCCC--ch-----hHHHHHHHHHHHH
Q 041590 173 AASIVFKDNEEYSKKLIHSAIMIFKFSRQYR---GRYSAGGVEAG------WFYNSRS--YW-----DEFTWSGAWLYYA 236 (493)
Q Consensus 173 aAs~v~k~D~~yA~~~l~~A~~~~~~a~~~~---~~y~~~~~~~~------~~Y~s~~--~~-----De~~wAAaeLy~A 236 (493)
-+.+.=-.| +++++..|+++|+-...+- |... +.-.++ .+|.+.. .. --++||++|+.+.
T Consensus 338 kgvr~G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~-~v~~gtg~g~d~~~Y~~~p~~~~d~~G~G~fllA~~E~~~l 413 (445)
T 3k11_A 338 HAINKGWID---AIAYGPVAQLGWHAVAGKINEEGQVE-GTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRL 413 (445)
T ss_dssp HHHHHTSSC---HHHHHHHHHHHHHHHHTTBCTTSCBC-SCBCCCCCCSSHHHHHTCCBCTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHcCCCC---HHHHHHHHHHHHHHHHHhCCCCCCEe-ceeeccCCCCCchhhccCcccCCCCccHHHHHHHHHHHHHH
Confidence 554431145 3578999999999988742 2211 111111 1333211 11 2489999999998
Q ss_pred hCCh
Q 041590 237 TGNS 240 (493)
Q Consensus 237 TGd~ 240 (493)
.+.+
T Consensus 414 ~~~~ 417 (445)
T 3k11_A 414 LNTQ 417 (445)
T ss_dssp HHHS
T ss_pred hccC
Confidence 6533
No 25
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=44.19 E-value=73 Score=31.74 Aligned_cols=25 Identities=20% Similarity=0.058 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhCChhhHHHHHhcc
Q 041590 226 FTWSGAWLYYATGNSSYLKLVTTTG 250 (493)
Q Consensus 226 ~~wAAaeLy~ATGd~~Yl~~a~~~~ 250 (493)
+.++.++||+.||+++|++.+....
T Consensus 92 ~g~~ll~lY~~Tgd~~yl~~a~~la 116 (373)
T 1nc5_A 92 AGLILFPLYEQTKDERYVKAAKRLR 116 (373)
T ss_dssp GGGGHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4578899999999999999998753
No 26
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=42.63 E-value=1.5e+02 Score=29.70 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCChhhHHHHHhc
Q 041590 228 WSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 228 wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
.+.++||+.||+++|++.+...
T Consensus 117 ~~l~~lY~~Tgd~~Yl~~a~~~ 138 (382)
T 3pmm_A 117 LTLAYRFEETGRMAYLPWLESW 138 (382)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHH
Confidence 4668999999999999998754
No 27
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=41.32 E-value=58 Score=32.98 Aligned_cols=140 Identities=6% Similarity=-0.095 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhcccc-ccCccCeEEEEecCCCCCCCCCCCCCCCCcCCCCC
Q 041590 73 SFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNH-SADSISRIIAQVGVGDISGGNKIPNDLYCWIRPEG 151 (493)
Q Consensus 73 a~tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~-~~~~~~~~y~qVgd~~~~~~~~~~~Dh~~w~~Pe~ 151 (493)
.+.-..|+|++.+- +. -+-++.++.++-+++||++-..+ .. |++|+.|... |..|.
T Consensus 50 ~~~nar~i~~~a~a---~~--~g~~~~l~~A~~~~~fl~~~~~D~~~---GG~~~s~d~d--------------g~~~~- 106 (421)
T 2zbl_A 50 LWITARMLHVYSVA---AS--MGRPGAYDLVDHGIKAMNGALRDKKY---GGWYACVNDQ--------------GVVDA- 106 (421)
T ss_dssp HHHHHHHHHHHHHH---HH--TTCTTHHHHHHHHHHHHTTTTBCTTT---SSBCSEEETT--------------EEEEC-
T ss_pred HHHHHHHHHHHHHH---HH--cCChhHHHHHHHHHHHHHHhccCcCC---CeEEEEeCCC--------------CCcCC-
Confidence 34445555554433 22 24578999999999999986333 22 5676665211 11122
Q ss_pred CCCCccccccCchHHHHHHHHHhhcccc--CCHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCC-cccccccCCCCch
Q 041590 152 IDYDRPVQECTSSSDLAAEMAAASIVFK--DNEEYSKKLIHSAIMIFKFSRQY---R--GRYSAGG-VEAGWFYNSRSYW 223 (493)
Q Consensus 152 ~~~~R~~~~~~~~~d~Aa~~AaAs~v~k--~D~~yA~~~l~~A~~~~~~a~~~---~--~~y~~~~-~~~~~~Y~s~~~~ 223 (493)
.. .--|.|-.+.+.+. ++ -++ +.++.|++++++.+++ | |-|.... .+..+.-......
T Consensus 107 ---~k------~lyd~Af~i~al~~-~~~tg~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n 172 (421)
T 2zbl_A 107 ---SK------QGYQHFFALLGAAS-AVTTGHP----EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGN 172 (421)
T ss_dssp ---CE------EHHHHHHHHHHHHH-HHTTTCT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHH
T ss_pred ---ch------hHHHHHHHHHHHHH-HHHhCCc----cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCc
Confidence 01 12222322222122 33 344 3466677777777763 1 2121110 0000000001123
Q ss_pred hH--HHHHHHHHHHHhCChhhHHHHHhc
Q 041590 224 DE--FTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 224 De--~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
.. ++-|.+.|+++||++.|++.+++.
T Consensus 173 ~~m~~~~al~~l~~~tgd~~~~~~A~~~ 200 (421)
T 2zbl_A 173 ANMHAVEAFLIVYDVTHDKKWLDRALRI 200 (421)
T ss_dssp HHHHHHHHHHHHHHTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 33 366788999999999999877654
No 28
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=29.54 E-value=33 Score=35.81 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCChhhHHHHHhc
Q 041590 226 FTWSGAWLYYATGNSSYLKLVTTT 249 (493)
Q Consensus 226 ~~wAAaeLy~ATGd~~Yl~~a~~~ 249 (493)
++.|.+|||++|++.+|++.|.+.
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 578999999999999999998754
No 29
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=29.28 E-value=2.7e+02 Score=27.52 Aligned_cols=70 Identities=6% Similarity=-0.066 Sum_probs=39.2
Q ss_pred HHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHhCChhhHHHH
Q 041590 167 LAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYATGNSSYLKLV 246 (493)
Q Consensus 167 ~Aa~~AaAs~v~k~D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~~~~De~~wAAaeLy~ATGd~~Yl~~a 246 (493)
++-....+.+++ .|++|.+.+.+.++.+++. ... ..+..-.-| .. =.+.....||+.|++++|++.+
T Consensus 284 i~~~l~~~~~~~-~d~~~~~~a~~~~~~~~~~---~~~--~~~~~LCHG---~a----G~~~~l~~l~~~~~~~~~~~~a 350 (409)
T 2g0d_A 284 ISLLYLYGGLAL-DNDYFVDKAEKILESAMQR---KLG--IDSYMICHG---YS----GLIEICSLFKRLLNTKKFDSYM 350 (409)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH---CTT--CCSCCTTTS---HH----HHHHHHHHHHHHHCCCTTHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh---ccC--CCCCCCCCh---HH----HHHHHHHHHHHHhCCHHHHHHH
Confidence 444444455555 4677766666666666653 011 011000111 11 1366678899999999999988
Q ss_pred Hhc
Q 041590 247 TTT 249 (493)
Q Consensus 247 ~~~ 249 (493)
..+
T Consensus 351 ~~~ 353 (409)
T 2g0d_A 351 EEF 353 (409)
T ss_dssp HHH
T ss_pred HHc
Confidence 753
No 30
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=27.64 E-value=4.4e+02 Score=26.26 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEec
Q 041590 75 NMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVG 129 (493)
Q Consensus 75 tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVg 129 (493)
-+..|+|+...+ +-++.+++++=-++++++-+..++ +.+||.+-
T Consensus 153 ni~~L~~A~~~~--------gd~~y~~~A~~~a~~~l~~~~r~d---gs~~h~~~ 196 (377)
T 2ahf_A 153 NLPLLLWAGEQT--------GDPEYRRVAEAHALKSRRFLVRGD---DSSYHTFY 196 (377)
T ss_dssp GHHHHHHHHHHH--------CCTHHHHHHHHHHHHHHHHTBBTT---SCBCSEEE
T ss_pred HHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCC---CCeEEEEE
Confidence 367788876653 457789999999999999764322 66666653
No 31
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=25.33 E-value=1.1e+02 Score=30.82 Aligned_cols=70 Identities=9% Similarity=-0.021 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc----cccccCCCCchhHHHH-HHHHHHHHhCChhhHHHHHhcc
Q 041590 181 NEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVE----AGWFYNSRSYWDEFTW-SGAWLYYATGNSSYLKLVTTTG 250 (493)
Q Consensus 181 D~~yA~~~l~~A~~~~~~a~~~~~~y~~~~~~----~~~~Y~s~~~~De~~w-AAaeLy~ATGd~~Yl~~a~~~~ 250 (493)
+.+--++.|+.+++-..-+....+.|....++ -.....+.+|..-+.. +...+|+.|||++|++.++++.
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~~ 97 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWF 97 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 44555666666666552221111333221111 1123455566665555 6667899999999999998754
No 32
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=23.87 E-value=96 Score=30.84 Aligned_cols=22 Identities=5% Similarity=0.270 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHHHhhccccc
Q 041590 96 LNHVKEIIKWGTDYLLKTFNHS 117 (493)
Q Consensus 96 ~~d~Lde~kwg~d~llk~~~~~ 117 (493)
-+...+-++=|++||+.||.++
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~n 113 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYST 113 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTT
T ss_pred chHHHHHHHHHHHHHHhccCCC
Confidence 3678889999999999998765
No 33
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=21.53 E-value=6.3e+02 Score=25.38 Aligned_cols=46 Identities=7% Similarity=-0.044 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhHHHHhhcCChHHHHHHHHHHHHHHhhccccccCccCeEEEEec
Q 041590 73 SFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVG 129 (493)
Q Consensus 73 a~tv~~L~wa~~e~~~~~~~~~~~~d~Lde~kwg~d~llk~~~~~~~~~~~~y~qVg 129 (493)
-..+..|+|+...+ +-++.+++++=-++++++-+..++ +++||.+-
T Consensus 176 ~mni~~L~~A~~~~--------gd~~y~~~A~~ha~~~l~~~~r~d---gs~~h~~~ 221 (397)
T 2zzr_A 176 LLNIQLLFFAYEQT--------GDEKYRQVAVNHFYASANNVVRDD---SSAFHTFY 221 (397)
T ss_dssp HHHTHHHHHHHHHH--------CCHHHHHHHHHHHHHHHHHTBCTT---SCBCSEEE
T ss_pred HhHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCC---CCeEEEEE
Confidence 34566677765432 457889999988888888754322 66766654
Done!