Query 041591
Match_columns 306
No_of_seqs 121 out of 161
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 08:44:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041591.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041591hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08449 UAA: UAA transporter 99.0 2.8E-09 6E-14 99.5 9.5 241 37-304 16-293 (303)
2 TIGR00817 tpt Tpt phosphate/ph 98.7 1.5E-07 3.3E-12 87.1 10.8 188 107-303 63-288 (302)
3 TIGR00950 2A78 Carboxylate/Ami 98.3 2.6E-06 5.6E-11 76.0 7.9 174 117-302 55-258 (260)
4 PF03151 TPT: Triose-phosphate 98.3 3.4E-07 7.5E-12 75.7 1.9 101 206-306 33-151 (153)
5 PF04142 Nuc_sug_transp: Nucle 98.2 2.4E-06 5.2E-11 79.1 6.9 186 107-294 15-239 (244)
6 PF06027 DUF914: Eukaryotic pr 98.0 4.4E-05 9.6E-10 74.4 10.7 194 107-306 77-303 (334)
7 PTZ00343 triose or hexose phos 97.9 1.8E-05 3.8E-10 76.2 6.1 182 114-305 119-345 (350)
8 PF13536 EmrE: Multidrug resis 97.7 0.00016 3.4E-09 58.7 6.9 75 111-186 36-111 (113)
9 PF00892 EamA: EamA-like trans 97.6 0.00024 5.2E-09 55.4 6.6 116 38-178 7-123 (126)
10 KOG2234 Predicted UDP-galactos 97.5 0.00028 6E-09 69.4 7.9 128 116-248 99-250 (345)
11 PRK11272 putative DMT superfam 97.4 0.0017 3.7E-08 60.3 11.0 180 111-302 70-279 (292)
12 PLN00411 nodulin MtN21 family 97.3 0.00073 1.6E-08 66.0 7.9 74 109-182 78-157 (358)
13 TIGR00688 rarD rarD protein. T 96.7 0.0029 6.2E-08 57.3 5.3 74 107-180 68-141 (256)
14 PRK11453 O-acetylserine/cystei 96.4 0.0041 8.9E-08 58.0 4.4 67 115-181 64-132 (299)
15 COG0697 RhaT Permeases of the 96.1 0.088 1.9E-06 46.6 11.3 76 110-185 71-147 (292)
16 PRK11689 aromatic amino acid e 96.0 0.015 3.2E-07 54.2 6.1 67 116-182 68-138 (295)
17 PRK15051 4-amino-4-deoxy-L-ara 95.8 0.042 9.1E-07 45.4 7.3 70 112-181 39-109 (111)
18 TIGR03340 phn_DUF6 phosphonate 95.7 0.098 2.1E-06 48.3 10.4 72 111-182 65-136 (281)
19 TIGR00950 2A78 Carboxylate/Ami 94.7 0.42 9E-06 42.7 10.8 63 113-175 195-258 (260)
20 PF05653 Mg_trans_NIPA: Magnes 94.6 0.06 1.3E-06 51.7 5.5 77 111-188 53-129 (300)
21 TIGR00776 RhaT RhaT L-rhamnose 94.6 0.13 2.7E-06 48.5 7.5 79 107-185 57-140 (290)
22 PRK10532 threonine and homoser 94.5 0.13 2.8E-06 48.0 7.4 171 114-300 76-273 (293)
23 PRK15430 putative chlorampheni 94.5 0.11 2.3E-06 48.6 6.8 68 113-180 77-144 (296)
24 PLN00411 nodulin MtN21 family 93.9 0.45 9.8E-06 46.7 10.1 73 108-182 257-329 (358)
25 PRK10532 threonine and homoser 92.4 1.5 3.2E-05 41.0 10.6 69 114-182 213-282 (293)
26 TIGR00776 RhaT RhaT L-rhamnose 91.8 0.41 8.8E-06 45.1 6.2 75 107-181 209-288 (290)
27 PRK10452 multidrug efflux syst 91.4 1.1 2.4E-05 38.1 7.8 69 115-183 36-105 (120)
28 PRK11272 putative DMT superfam 91.4 1.7 3.7E-05 40.4 9.8 66 116-181 219-285 (292)
29 KOG4510 Permease of the drug/m 91.2 0.49 1.1E-05 46.4 6.1 106 128-234 116-245 (346)
30 TIGR03340 phn_DUF6 phosphonate 90.9 0.34 7.4E-06 44.7 4.6 63 116-178 218-280 (281)
31 PRK15430 putative chlorampheni 89.7 4.1 8.9E-05 38.1 10.7 69 110-178 214-282 (296)
32 PRK11689 aromatic amino acid e 88.5 1.7 3.8E-05 40.5 7.4 65 115-179 221-285 (295)
33 PF06800 Sugar_transport: Suga 82.9 4.3 9.3E-05 39.1 7.1 81 107-187 43-128 (269)
34 TIGR00803 nst UDP-galactose tr 82.4 1.8 3.9E-05 38.6 4.1 178 118-302 8-218 (222)
35 COG0697 RhaT Permeases of the 81.9 6.4 0.00014 34.8 7.4 76 107-182 212-288 (292)
36 COG2510 Predicted membrane pro 81.0 3.4 7.3E-05 36.5 5.1 75 107-181 65-139 (140)
37 PRK11431 multidrug efflux syst 80.7 8.4 0.00018 32.0 7.2 64 117-180 37-101 (105)
38 PF13536 EmrE: Multidrug resis 80.2 0.5 1.1E-05 38.2 -0.2 86 216-303 5-101 (113)
39 PF03151 TPT: Triose-phosphate 79.1 14 0.00029 30.4 8.0 131 35-178 13-150 (153)
40 PRK10650 multidrug efflux syst 78.1 9.4 0.0002 32.0 6.7 64 116-179 42-106 (109)
41 PRK09541 emrE multidrug efflux 76.2 14 0.0003 30.8 7.3 63 120-182 41-104 (110)
42 PF00892 EamA: EamA-like trans 75.6 2 4.4E-05 33.1 2.0 89 209-303 20-121 (126)
43 PRK02971 4-amino-4-deoxy-L-ara 75.1 11 0.00024 32.1 6.5 72 112-183 50-124 (129)
44 PRK11453 O-acetylserine/cystei 72.8 12 0.00026 34.9 6.8 61 121-181 227-287 (299)
45 TIGR00803 nst UDP-galactose tr 71.7 4.3 9.2E-05 36.2 3.4 127 31-175 90-218 (222)
46 KOG1443 Predicted integral mem 69.7 6.3 0.00014 39.3 4.3 183 104-302 83-309 (349)
47 KOG2922 Uncharacterized conser 68.7 1.8 3.8E-05 43.0 0.3 59 130-188 85-143 (335)
48 KOG2765 Predicted membrane pro 68.7 14 0.00031 37.7 6.6 191 107-303 157-385 (416)
49 KOG1444 Nucleotide-sugar trans 66.3 7.4 0.00016 38.5 4.0 167 127-302 95-294 (314)
50 TIGR00817 tpt Tpt phosphate/ph 65.8 11 0.00023 35.1 4.8 60 121-180 233-292 (302)
51 PF00893 Multi_Drug_Res: Small 62.5 19 0.00041 28.6 5.1 54 118-171 38-92 (93)
52 PRK13499 rhamnose-proton sympo 61.2 26 0.00055 35.0 6.7 74 107-181 71-153 (345)
53 COG2076 EmrE Membrane transpor 57.5 34 0.00073 28.9 5.9 60 120-179 41-101 (106)
54 KOG1442 GDP-fucose transporter 54.4 6.7 0.00015 38.8 1.4 122 107-238 104-245 (347)
55 KOG1581 UDP-galactose transpor 52.2 84 0.0018 31.4 8.5 148 111-262 85-261 (327)
56 COG2962 RarD Predicted permeas 49.5 25 0.00055 34.5 4.5 79 107-185 70-148 (293)
57 PF04657 DUF606: Protein of un 47.5 1.1E+02 0.0024 26.2 7.6 107 48-178 27-138 (138)
58 PF12270 Cyt_c_ox_IV: Cytochro 45.8 1.7E+02 0.0037 25.8 8.6 74 111-202 7-85 (137)
59 KOG4314 Predicted carbohydrate 41.9 33 0.00071 32.8 3.8 78 118-202 62-139 (290)
60 PRK13499 rhamnose-proton sympo 41.5 1.3E+02 0.0029 30.0 8.2 77 105-182 256-342 (345)
61 PF06027 DUF914: Eukaryotic pr 39.6 3.9E+02 0.0085 26.5 11.4 147 13-185 163-309 (334)
62 KOG4314 Predicted carbohydrate 37.6 9 0.0002 36.5 -0.5 39 265-303 82-120 (290)
63 TIGR00688 rarD rarD protein. T 36.4 58 0.0013 29.4 4.5 47 110-156 209-255 (256)
64 PTZ00343 triose or hexose phos 33.7 1.1E+02 0.0025 29.6 6.3 65 115-179 278-346 (350)
65 PRK15051 4-amino-4-deoxy-L-ara 33.4 12 0.00026 30.9 -0.4 27 277-303 78-104 (111)
66 PF08636 Pkr1: ER protein Pkr1 32.6 47 0.001 26.5 2.8 46 132-178 13-58 (75)
67 PF10639 UPF0546: Uncharacteri 25.2 1.5E+02 0.0032 25.2 4.8 61 118-178 50-111 (113)
68 PF05884 ZYG-11_interact: Inte 24.8 2.5E+02 0.0054 27.9 6.8 118 9-156 91-211 (299)
69 PRK01844 hypothetical protein; 24.4 39 0.00085 26.9 1.1 28 20-47 4-31 (72)
70 KOG3912 Predicted integral mem 24.0 1.7E+02 0.0036 29.5 5.5 61 121-182 99-159 (372)
71 KOG3787 Glutamate/aspartate an 22.8 1.7E+02 0.0038 30.8 5.6 90 166-270 15-106 (507)
72 COG5615 Predicted integral mem 22.7 60 0.0013 29.3 2.0 57 133-193 32-88 (161)
73 COG5006 rhtA Threonine/homoser 21.2 4.7E+02 0.01 25.9 7.8 72 106-177 206-278 (292)
74 PF11052 Tr-sialidase_C: Trans 20.7 54 0.0012 21.3 1.0 10 296-305 15-24 (25)
75 PRK10582 cytochrome o ubiquino 20.6 50 0.0011 27.9 1.1 24 187-210 9-38 (109)
76 PRK00523 hypothetical protein; 20.1 54 0.0012 26.1 1.1 28 20-47 5-32 (72)
No 1
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.96 E-value=2.8e-09 Score=99.49 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=180.1
Q ss_pred hhhhhhheeecCCc-chhhHHHHhhcCchhHHHhhhcCCCCCCCCCccccccccchhhhhhhhcCCCCccchhhHHHHHH
Q 041591 37 AILLGRQYYDKGGN-SKWLSTLAQFGGFPILLLSYCINPPRRKCKNTEIVFVHTKRLFFFILVSGYSTSILNAPSVYVSV 115 (306)
Q Consensus 37 a~LL~R~Yf~~GG~-skWlst~vQtaGfPlLl~pl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~L~~~y~~l 115 (306)
+-+..+..-.++++ .-|.-+++|.+--.+.-.+......+++. +..| .--|+.+
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~--------------------~~~~-----~~~~~~~ 70 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS--------------------RKIP-----LKKYAIL 70 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC--------------------CcCh-----HHHHHHH
Confidence 45566666666666 79999999998887766655443221111 1111 2356667
Q ss_pred HHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCc-ccc
Q 041591 116 GILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGV-SKR 194 (306)
Q Consensus 116 G~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~-s~~ 194 (306)
+++......+=..++.|+|++|..++=++-+.+++++++++.|+|+++.-+=+++++++|.++.++.+++++++.. ++.
T Consensus 71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~ 150 (303)
T PF08449_consen 71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF 150 (303)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence 8888888888889999999999999999999999999999999999999999999999999999998765544332 222
Q ss_pred ceeeeeeh-------------------hhH-HHHHHHHHhHHHHHHHHHhhhhhc--ccCccchHHHHhhccCCce----
Q 041591 195 KYAIGFIL-------------------EAF-TAILDMVLYPYFAASCAILVGLFV--SREWVNLKREMEEYKLGKL---- 248 (306)
Q Consensus 195 kY~iGf~~-------------------~tf-~~VlemQi~~s~vAT~~~~VGl~a--sgef~~l~~E~~~F~~G~~---- 248 (306)
....|..+ +.+ .-..|+-.++++.+++.+...++. +||+++--+-..+... .
T Consensus 151 ~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~--~~~~l 228 (303)
T PF08449_consen 151 SSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPS--VLLYL 228 (303)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHH--HHHHH
Confidence 23348876 111 223799999999999999999999 8998543333322211 2
Q ss_pred ---------EEeecchhhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhhc
Q 041591 249 ---------YAIGSTGLIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGFL 304 (306)
Q Consensus 249 ---------~~vG~vGlIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF~ 304 (306)
+..+..-++=..|++...++.++.-+++-++.++.||++++..-.+..++.+-|..
T Consensus 229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~ 293 (303)
T PF08449_consen 229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIF 293 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHH
Confidence 22222334556789999999999999999999999999999999999988776643
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.67 E-value=1.5e-07 Score=87.10 Aligned_cols=188 Identities=19% Similarity=0.156 Sum_probs=132.1
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
|-....+.+|++.+.+..+..+|+.|.++|+++++.+++=.|++++++++-|+|+++..+=++++..+|.++.+ +. |
T Consensus 63 ~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~--~ 139 (302)
T TIGR00817 63 ALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS-DT--E 139 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc-CC--c
Confidence 34445666788888999999999999999999999999999999999999999999999999999999987643 11 1
Q ss_pred CCCCccccceeeeeeh-------hhHH-------------HHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccC-
Q 041591 187 NSTGVSKRKYAIGFIL-------EAFT-------------AILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKL- 245 (306)
Q Consensus 187 ~~~g~s~~kY~iGf~~-------~tf~-------------~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~- 245 (306)
. +. -..|.++ .+.. -.+++..++...++++.+...+..+|+...+.|..+...
T Consensus 140 ~--~~----~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T TIGR00817 140 L--SF----NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISG 213 (302)
T ss_pred c--cc----cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcc
Confidence 1 11 1246543 1110 124567788888888888777776666555555543211
Q ss_pred -C--ceEE----ee--cch--------hhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhh
Q 041591 246 -G--KLYA----IG--STG--------LIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 246 -G--~~~~----vG--~vG--------lIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF 303 (306)
. ..+. .+ +.. .+=.+|+...++...+.-.++.+++++++||+++..+.+..++.+-|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv 288 (302)
T TIGR00817 214 VNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGV 288 (302)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHH
Confidence 1 1111 11 111 122567777777755555555578999999999999999999988775
No 3
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.28 E-value=2.6e-06 Score=75.96 Aligned_cols=174 Identities=16% Similarity=0.186 Sum_probs=115.9
Q ss_pred HHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCccccce
Q 041591 117 ILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSKRKY 196 (306)
Q Consensus 117 ~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~~kY 196 (306)
+..+.++.+|-+++.|.|+++.+++.+++=.|+++++.++.|||.++..+-.+++-.+|..++..+.+. + .+
T Consensus 55 ~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~----~----~~ 126 (260)
T TIGR00950 55 LQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL----S----IN 126 (260)
T ss_pred HHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc----c----cc
Confidence 446788899999999999999999999999999999999999999999999999999998887543211 1 12
Q ss_pred eeeeeh---------------h----hHHH-HHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccCCceEEeecch-
Q 041591 197 AIGFIL---------------E----AFTA-ILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKLGKLYAIGSTG- 255 (306)
Q Consensus 197 ~iGf~~---------------~----tf~~-VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~~~vG~vG- 255 (306)
..|... + .... ...+..+..++++.++..-....++.+.. +.+++ .....+|.++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW--GALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH--HHHHHHHHHHH
Confidence 334432 1 1110 01122244667777666555555543322 11111 0011122221
Q ss_pred ---h------hhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHh
Q 041591 256 ---L------IFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWG 302 (306)
Q Consensus 256 ---l------If~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWG 302 (306)
- +=..+.-.+.++....-++..+++++++||+++..+.++.++.+-|
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g 258 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAA 258 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 1 1123444667777777888889999999999999999998887654
No 4
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.27 E-value=3.4e-07 Score=75.73 Aligned_cols=101 Identities=26% Similarity=0.267 Sum_probs=88.3
Q ss_pred HHHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhcc-----CCce-------------EEeecchhhhhhhhhhHHH
Q 041591 206 TAILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYK-----LGKL-------------YAIGSTGLIFETSSLFSNA 267 (306)
Q Consensus 206 ~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~-----~G~~-------------~~vG~vGlIf~vSSLfs~V 267 (306)
.-.+|||.+++..+++.+.+.++..+|++..+.+.+.++ ..+. ..+....++-.+|++.-+|
T Consensus 33 ~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v 112 (153)
T PF03151_consen 33 LNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSV 112 (153)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHH
Confidence 456899999999999999999999999987766665443 2222 5566778888999999999
Q ss_pred HHhhccccceeeeeEEeccCCchHHHHHHHHHHHhhccC
Q 041591 268 IGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGFLSY 306 (306)
Q Consensus 268 i~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF~SY 306 (306)
++.+--+++-++++++|||+++..+++.+++++.|...|
T Consensus 113 ~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 113 LGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999987
No 5
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.24 E-value=2.4e-06 Score=79.14 Aligned_cols=186 Identities=20% Similarity=0.262 Sum_probs=129.4
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
|-.+.+.+=.++-+.+|.++=+++.|++.+||.++.-+-+.+||+|+.++-|+|+++.-+-|++++++|.++...++..+
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 66678888899999999999999999999999999999999999999999999999999999999999999988876432
Q ss_pred --CC--CC----ccccceeeeeeh-------hhH-------------HHHHHHHHhHHHHHHHHHhhhhhcccCccchHH
Q 041591 187 --NS--TG----VSKRKYAIGFIL-------EAF-------------TAILDMVLYPYFAASCAILVGLFVSREWVNLKR 238 (306)
Q Consensus 187 --~~--~g----~s~~kY~iGf~~-------~tf-------------~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~ 238 (306)
.+ ++ .+...+.+|..+ ..+ .-....++.+++...++..+++.. .||+++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~~~ 173 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAISE 173 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccccc
Confidence 11 11 124567889765 111 222333344455555555565544 45655443
Q ss_pred H--HhhccCCce------EEeecc---hhhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHH
Q 041591 239 E--MEEYKLGKL------YAIGST---GLIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVI 294 (306)
Q Consensus 239 E--~~~F~~G~~------~~vG~v---GlIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~v 294 (306)
+ .++|.. -+ -.+|.+ -++=..+++.=+...++.+-++.++.+++|+.+.+..-.+
T Consensus 174 ~g~f~G~~~-~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l 239 (244)
T PF04142_consen 174 SGFFHGYSW-WVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL 239 (244)
T ss_pred CCchhhcch-HHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence 3 223321 11 112211 1233456677777778888888888888898888765543
No 6
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.00 E-value=4.4e-05 Score=74.37 Aligned_cols=194 Identities=16% Similarity=0.243 Sum_probs=138.0
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
+--.-|+.++++=-..||++-.++.|-.++...|+-++-..|+.++|+++-|.|++..-+-.+.+-..|.+++...+...
T Consensus 77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~ 156 (334)
T PF06027_consen 77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS 156 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence 33467999999999999999999999999999999999999999999999999999999999999988888776654211
Q ss_pred CCCCccccceeeeeeh-------------------hhHHHHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhcc-CC
Q 041591 187 NSTGVSKRKYAIGFIL-------------------EAFTAILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYK-LG 246 (306)
Q Consensus 187 ~~~g~s~~kY~iGf~~-------------------~tf~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~-~G 246 (306)
..++.+..+-+.|=.+ +.. -..|+.-.+++++++++.+=+++ =|++++ ++++ .+
T Consensus 157 ~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~i-le~~~i----~~~~w~~ 230 (334)
T PF06027_consen 157 GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAI-LERSGI----ESIHWTS 230 (334)
T ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHh-eehhhh----hccCCCh
Confidence 1111222333444333 122 24678888999999998876554 466544 3333 23
Q ss_pred ce--EEeecc----------h-hhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhhccC
Q 041591 247 KL--YAIGST----------G-LIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGFLSY 306 (306)
Q Consensus 247 ~~--~~vG~v----------G-lIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF~SY 306 (306)
+. +.+|-. - ++-..|+.+-|+-.-..-|..-+..+++||+++++...+|.++-+-||.=|
T Consensus 231 ~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 231 QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY 303 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence 33 111111 1 122344555555444445666788899999999999999999999998644
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.91 E-value=1.8e-05 Score=76.20 Aligned_cols=182 Identities=16% Similarity=0.164 Sum_probs=121.3
Q ss_pred HHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCccc
Q 041591 114 SVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSK 193 (306)
Q Consensus 114 ~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~ 193 (306)
-+|++-...+...-+++.|.|+|..+++-++-=+|++++++++-|+|+|...+-++++..+|..+...++ . +
T Consensus 119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-~-------~ 190 (350)
T PTZ00343 119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-L-------H 190 (350)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-c-------h
Confidence 3444433334444488999999999999999999999999999999999999999999999999865321 1 1
Q ss_pred cceeeeeeh-------------------hhHH------HHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHh-------
Q 041591 194 RKYAIGFIL-------------------EAFT------AILDMVLYPYFAASCAILVGLFVSREWVNLKREME------- 241 (306)
Q Consensus 194 ~kY~iGf~~-------------------~tf~------~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~------- 241 (306)
-...|+++ +.++ ..+++..++.+++.+++.-..+.. |.........
T Consensus 191 -~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-e~~~~~~~~~~~~~~~~ 268 (350)
T PTZ00343 191 -FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF-EGKKWVPVWTNYTANMT 268 (350)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhhccc
Confidence 12457776 1111 133444555777777766554433 3222222211
Q ss_pred hccCCce-EEe---ecchhhhh---------hhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhhcc
Q 041591 242 EYKLGKL-YAI---GSTGLIFE---------TSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGFLS 305 (306)
Q Consensus 242 ~F~~G~~-~~v---G~vGlIf~---------vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF~S 305 (306)
++..... ..+ |.....+. +|.+-.++.+++-=.++-++++++|||+++..+.+..++++.|..=
T Consensus 269 ~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 269 NYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 1111111 111 22222222 6777788888877778888999999999999999999999998653
No 8
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.66 E-value=0.00016 Score=58.65 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=66.9
Q ss_pred HHHHHHHHHh-hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 111 VYVSVGILLA-ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 111 ~y~~lG~l~~-~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
..+..|++.+ ....+|.++..|.| +..+.+.+++-.|+++++.++-|||+++..+-++.+.++|.++++.++.++
T Consensus 36 ~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 36 WLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence 3455577775 88999999999999 688899999999999999999999999999999999999999998876543
No 9
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.57 E-value=0.00024 Score=55.38 Aligned_cols=116 Identities=17% Similarity=0.177 Sum_probs=83.7
Q ss_pred hhhhhheeecCCcchhhHHHHhhcCchhHHHhhhcCCCCCCCCCccccccccchhhhhhhhcCCCCccchhhHHHHHHHH
Q 041591 38 ILLGRQYYDKGGNSKWLSTLAQFGGFPILLLSYCINPPRRKCKNTEIVFVHTKRLFFFILVSGYSTSILNAPSVYVSVGI 117 (306)
Q Consensus 38 ~LL~R~Yf~~GG~skWlst~vQtaGfPlLl~pl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~L~~~y~~lG~ 117 (306)
..+.|.-.++ -+..++..+-...|.+ +++...+...++ ..+ .++ +-....+.+|+
T Consensus 7 ~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-------------------~~~---~~~~~~~~~~~ 61 (126)
T PF00892_consen 7 SVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP-FKN-------------------LSP---RQWLWLLFLGL 61 (126)
T ss_pred HHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc-ccC-------------------CCh---hhhhhhhHhhc
Confidence 3344444444 4556777777777777 444444432221 110 111 33344556677
Q ss_pred H-HhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 118 L-LAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 118 l-~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
+ .+...++|.+|+.|.|++..+.+..++-.+++++++++.++|+++..+-++++..+|..+
T Consensus 62 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l 123 (126)
T PF00892_consen 62 LGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL 123 (126)
T ss_pred cceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 7 689999999999999999999999999999999999999999999999999998888765
No 10
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.00028 Score=69.38 Aligned_cols=128 Identities=18% Similarity=0.224 Sum_probs=100.6
Q ss_pred HHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCC--CCccc
Q 041591 116 GILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENS--TGVSK 193 (306)
Q Consensus 116 G~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~--~g~s~ 193 (306)
-++.+.+|.|+=+++.+||.+||..-.=.-...||+|+.++-|+|++..-+-|+++|+.|.+++.+++.+..+ ++.+.
T Consensus 99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~ 178 (345)
T KOG2234|consen 99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSA 178 (345)
T ss_pred HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcc
Confidence 4477889999999999999999997666666899999999999999999999999999999999866543332 35667
Q ss_pred cceeeeeeh----------------------hhHHHHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccCCce
Q 041591 194 RKYAIGFIL----------------------EAFTAILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKLGKL 248 (306)
Q Consensus 194 ~kY~iGf~~----------------------~tf~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~ 248 (306)
...+.|+.. ..=..+-.+|. +++...++.+|+... ||++++ -.+|=.|-.
T Consensus 179 ~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL--~~~g~~f~~l~~~~~-d~~~i~--~~gff~G~s 250 (345)
T KOG2234|consen 179 QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQL--YFFGILFNLLTILLQ-DGEAIN--EYGFFYGYS 250 (345)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH--HHHHHHHHHHHHhhc-cccccc--cCCcccccc
Confidence 788999975 22244555554 567888888888887 998888 445555554
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.39 E-value=0.0017 Score=60.28 Aligned_cols=180 Identities=14% Similarity=0.134 Sum_probs=104.3
Q ss_pred HHHHHHHHH-hhhhHHHHhhc-ccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCC
Q 041591 111 VYVSVGILL-AANGFLYSVGL-LYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENS 188 (306)
Q Consensus 111 ~y~~lG~l~-~~dn~lYs~Gl-~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~ 188 (306)
.+..+|++. +....+|.++. .+.|+++.+++.+++=.|+++++.+ .|||+|...+-++++-.+|..++..+++.+
T Consensus 70 ~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~-- 146 (292)
T PRK11272 70 NAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLS-- 146 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccc--
Confidence 345567664 35667777888 9999999999999999999999986 699999999999999988887764332111
Q ss_pred CCccccceeeeeeh--------hhHHHH---------HHHHHhHHHHHHHHHhhhhhcccC-ccchHHHHhhccCCceEE
Q 041591 189 TGVSKRKYAIGFIL--------EAFTAI---------LDMVLYPYFAASCAILVGLFVSRE-WVNLKREMEEYKLGKLYA 250 (306)
Q Consensus 189 ~g~s~~kY~iGf~~--------~tf~~V---------lemQi~~s~vAT~~~~VGl~asge-f~~l~~E~~~F~~G~~~~ 250 (306)
+ . ..|..+ ..|... .....+...+++..+..-....++ +...+ +.+.+. ....
T Consensus 147 -~-~----~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~ 217 (292)
T PRK11272 147 -G-N----PWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALP-TLSGFL--ALGY 217 (292)
T ss_pred -c-c----hHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccC-CHHHHH--HHHH
Confidence 1 1 123222 000000 112233333333332222222222 21111 111110 0022
Q ss_pred eecchh----hh------hhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHh
Q 041591 251 IGSTGL----IF------ETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWG 302 (306)
Q Consensus 251 vG~vGl----If------~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWG 302 (306)
+|..+- .+ ..++-..+++....-+...+++++++||+++..+++..++-+=|
T Consensus 218 l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~g 279 (292)
T PRK11272 218 LAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFA 279 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 222221 11 22334455666666667777889999999999998887766543
No 12
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.31 E-value=0.00073 Score=65.99 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHH------hcccCChhHHHHHHHHHHhhheeeee
Q 041591 109 PSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFL------NKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 109 ~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i------~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
......+|++-...+.+|.+|+.|.|.+..|++.+++=.|+++++.++ -|+|.|+.-+-.+++-..|..++..+
T Consensus 78 ~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~ 157 (358)
T PLN00411 78 LSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY 157 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence 344444666655566789999999999999999999999999999999 69999999999999988888776543
No 13
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.68 E-value=0.0029 Score=57.28 Aligned_cols=74 Identities=11% Similarity=0.063 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheee
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLV 180 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~ 180 (306)
+........|++.+....+|.+++.|.|+++.+.+..++=.|+++++.++-|+|+++.-+-++++--+|.+++.
T Consensus 68 ~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 68 PLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 34445666788899999999999999999999999999999999999999999999999999999888888754
No 14
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=96.37 E-value=0.0041 Score=57.99 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=54.7
Q ss_pred HHHHHhh-hhHHHHhhccc-ccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeee
Q 041591 115 VGILLAA-NGFLYSVGLLY-LPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVF 181 (306)
Q Consensus 115 lG~l~~~-dn~lYs~Gl~Y-LPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l 181 (306)
.|++... +..+|-++..| +|.+..+++.+++=.|+.+++.++-|+|+++..+-++++-.+|..++-.
T Consensus 64 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 64 YGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 3554333 33344467766 8999999999999999999999999999999999999999999887653
No 15
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.11 E-value=0.088 Score=46.58 Aligned_cols=76 Identities=18% Similarity=0.186 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHH-HHhcccCChhHHHHHHHHHHhhheeeeeCCC
Q 041591 110 SVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSY-FLNKQKFTPYIVNCLVLLTISSTLLVFQNDS 185 (306)
Q Consensus 110 ~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~-~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~s 185 (306)
...+.-++..+..+++|-+++.|.|+++.+.+.+++-.|+++++. ++.++|+++..+..+++..+|..++..+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 344555777788889999999999999999999999999999996 7779999999999988888888887665543
No 16
>PRK11689 aromatic amino acid exporter; Provisional
Probab=95.98 E-value=0.015 Score=54.25 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=53.7
Q ss_pred HHHHhhhhHHHHhhc----ccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 116 GILLAANGFLYSVGL----LYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 116 G~l~~~dn~lYs~Gl----~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
|+..+....++..|. .+.|.++.+++.+++=.|+++++.++.|+|+++.-+-.+++-.+|.+++..+
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 333445555544444 4678888899999999999999999999999999999999999998887544
No 17
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.79 E-value=0.042 Score=45.37 Aligned_cols=70 Identities=13% Similarity=0.114 Sum_probs=61.8
Q ss_pred HHHHH-HHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeee
Q 041591 112 YVSVG-ILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVF 181 (306)
Q Consensus 112 y~~lG-~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l 181 (306)
+..++ +..+...+++++.+..+|+|+..-+.+++-+++++.++++-+||+|+.-+-.+++...|-++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 33344 55777889999999999999999988999999999999999999999999999999999888764
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=95.74 E-value=0.098 Score=48.28 Aligned_cols=72 Identities=7% Similarity=0.039 Sum_probs=63.6
Q ss_pred HHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 111 VYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 111 ~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
..+.-|+..+...+.+.+|+.|.|++..+.+..++-.|+++++.++-|+|+|+.-+-.+++...|..++..+
T Consensus 65 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 65 LLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 334456677888889999999999999999999999999999999999999999999999999998876543
No 19
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=94.71 E-value=0.42 Score=42.68 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=53.5
Q ss_pred HHHHHHH-hhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHh
Q 041591 113 VSVGILL-AANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTIS 175 (306)
Q Consensus 113 ~~lG~l~-~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~s 175 (306)
+.+|++. +.-..+|.+++.++|+++.+.+..++-.++++++.++.++|+|+..+-..++...|
T Consensus 195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g 258 (260)
T TIGR00950 195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAA 258 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 3345553 45667799999999999999999999999999999999999999988887776655
No 20
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.64 E-value=0.06 Score=51.67 Aligned_cols=77 Identities=23% Similarity=0.354 Sum_probs=65.3
Q ss_pred HHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCC
Q 041591 111 VYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENS 188 (306)
Q Consensus 111 ~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~ 188 (306)
..+++ ++++..+.+--.++.+.|.|.-+=+.+.++.||+++|.++.++|++..-+-.+++..+|++++..++..+++
T Consensus 53 W~~G~-~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~ 129 (300)
T PF05653_consen 53 WWIGL-LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEP 129 (300)
T ss_pred HHHHH-HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCC
Confidence 44444 244666677778899999999999999999999999999999999999999999999999999888755544
No 21
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=94.58 E-value=0.13 Score=48.51 Aligned_cols=79 Identities=22% Similarity=0.135 Sum_probs=71.4
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhh-hhhhhhHHHHHHHhcccCChhH----HHHHHHHHHhhheeee
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITA-SQLAFNSLFSYFLNKQKFTPYI----VNCLVLLTISSTLLVF 181 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~a-tQLaFtaiFs~~i~~qKfT~~i----iNsVVLLT~sa~lL~l 181 (306)
++...-+.-|++.+.-|+.|=.+..|+.+|+.-++.+ .|..++.+++.++-|+|.|+-. +-++++..+|..+++.
T Consensus 57 ~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~ 136 (290)
T TIGR00776 57 SIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR 136 (290)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence 6667778889999999999999999999999988888 9999999999999999999988 8899999999999887
Q ss_pred eCCC
Q 041591 182 QNDS 185 (306)
Q Consensus 182 ~s~s 185 (306)
++++
T Consensus 137 ~~~~ 140 (290)
T TIGR00776 137 SKDK 140 (290)
T ss_pred cccc
Confidence 7543
No 22
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=94.54 E-value=0.13 Score=48.00 Aligned_cols=171 Identities=12% Similarity=0.091 Sum_probs=92.3
Q ss_pred HHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCccc
Q 041591 114 SVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSK 193 (306)
Q Consensus 114 ~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~ 193 (306)
..|+..+..++++-+++.|+|.+..+.+..++-.|+++++. +|...... +.+.-+|..++ +..+.|.. +.
T Consensus 76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~li-~~~~~~~~-~~-- 145 (293)
T PRK10532 76 FYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFVW--VVLAVLGLWFL-LPLGQDVS-HV-- 145 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHHH--HHHHHHHHhee-eecCCCcc-cC--
Confidence 46777888899999999999999999999999888888773 55554433 22333343443 32221111 11
Q ss_pred cceeeeeeh--------hhHHHHH---------HHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccCCceEEeecchh
Q 041591 194 RKYAIGFIL--------EAFTAIL---------DMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKLGKLYAIGSTGL 256 (306)
Q Consensus 194 ~kY~iGf~~--------~tf~~Vl---------emQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~~~vG~vGl 256 (306)
...|-.+ -.|.+.. ....+.+++++++.....+..++ ....+.+.+. -...+|.++-
T Consensus 146 --~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~l~lgv~~t 219 (293)
T PRK10532 146 --DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAG--EALWHWSILP--LGLAVAILST 219 (293)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccC--cccCCHHHHH--HHHHHHHHHH
Confidence 1234332 1111111 01134445555444433333221 1011111110 0012222211
Q ss_pred ----hh------hhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHH
Q 041591 257 ----IF------ETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAI 300 (306)
Q Consensus 257 ----If------~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~lai 300 (306)
.. ..++-.+.++....-+...+++++++||+++....+..++-+
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl 273 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAII 273 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 01 223455667777777888899999999999999988776654
No 23
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=94.53 E-value=0.11 Score=48.58 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=61.9
Q ss_pred HHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheee
Q 041591 113 VSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLV 180 (306)
Q Consensus 113 ~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~ 180 (306)
+.-++..+..+.+|-+|+.|+|+++.+++..+.=.|++++++++.|+|+++.-+-++++--+|.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 34466788899999999999999999999999999999999999999999999999999888888753
No 24
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=93.93 E-value=0.45 Score=46.68 Aligned_cols=73 Identities=7% Similarity=0.008 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 108 APSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 108 L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
+..+|.+ +..+.--.++.+++.++|.++.|+..--|=.|++++++++-.+++|+..+-..++.-.|-.+....
T Consensus 257 ~~i~y~~--i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 257 ITIVTMA--IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 3456654 445666678999999999999999999999999999999999999999998888877777664443
No 25
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=92.41 E-value=1.5 Score=40.98 Aligned_cols=69 Identities=20% Similarity=0.151 Sum_probs=58.5
Q ss_pred HHHHHHhhhh-HHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 114 SVGILLAANG-FLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 114 ~lG~l~~~dn-~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
.+|+.-..-. .+|.+++.+.|.++.|++...|-.|+++++.++..+++|+..+--.++...+..+....
T Consensus 213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 4677755444 49999999999999999999999999999999999999999988888877777765433
No 26
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=91.85 E-value=0.41 Score=45.09 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=65.0
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcc-cccchhhhhhhhhhhhhhHHHHHHHhcccCChhHH----HHHHHHHHhhheeee
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLL-YLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIV----NCLVLLTISSTLLVF 181 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~-YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~ii----NsVVLLT~sa~lL~l 181 (306)
+.....+..|++.+.-+.+|..|.. ++|+++.+.+....-.-+.+++.++-++++++..+ -..++.-.++.+.++
T Consensus 209 ~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 209 YAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 3444455589999999999999999 99999999999999999999999999999999988 777777777777654
No 27
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=91.38 E-value=1.1 Score=38.06 Aligned_cols=69 Identities=14% Similarity=0.234 Sum_probs=59.5
Q ss_pred HHHHHhhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeC
Q 041591 115 VGILLAANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQN 183 (306)
Q Consensus 115 lG~l~~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s 183 (306)
.-+..+..=++.+..+.++|+|+ |++....-.+.+++.+.++-+||+|..-+-.+.++.+|-.++-+.+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34556677788899999999997 6777788999999999999999999999999999999998876554
No 28
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=91.37 E-value=1.7 Score=40.41 Aligned_cols=66 Identities=11% Similarity=0.031 Sum_probs=57.8
Q ss_pred HHH-HhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeee
Q 041591 116 GIL-LAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVF 181 (306)
Q Consensus 116 G~l-~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l 181 (306)
|++ .+.-.++|.+++.++|.++.|++...+-++++++++++.++++|+..+-..++...|..++..
T Consensus 219 ~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 219 AVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 444 345667999999999999999999999999999999999999999999999888888877533
No 29
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=91.24 E-value=0.49 Score=46.36 Aligned_cols=106 Identities=20% Similarity=0.298 Sum_probs=69.2
Q ss_pred hhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeC--------CCCCCCCcccc--cee
Q 041591 128 VGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQN--------DSENSTGVSKR--KYA 197 (306)
Q Consensus 128 ~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s--------~sd~~~g~s~~--kY~ 197 (306)
|++.|+|.+-.++|.=+.=.||++||+.+-|+|||++..--. +.|+..++|=++. ++|+.++++.. +-.
T Consensus 116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s-~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~ 194 (346)
T KOG4510|consen 116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGS-LITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV 194 (346)
T ss_pred HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHH-HHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence 567899999999999999999999999999999999865443 4566666555543 22332221111 101
Q ss_pred eee--eh---hhHHHHHHH---------HHhHHHHHHHHHhhhhhcccCcc
Q 041591 198 IGF--IL---EAFTAILDM---------VLYPYFAASCAILVGLFVSREWV 234 (306)
Q Consensus 198 iGf--~~---~tf~~Vlem---------Qi~~s~vAT~~~~VGl~asgef~ 234 (306)
.+. .+ .+|...=-| .-|-+.++++++++|...=|+|+
T Consensus 195 aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~ 245 (346)
T KOG4510|consen 195 AAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ 245 (346)
T ss_pred HHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee
Confidence 110 11 222221111 24678899999999999999885
No 30
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=90.90 E-value=0.34 Score=44.73 Aligned_cols=63 Identities=11% Similarity=0.253 Sum_probs=55.5
Q ss_pred HHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 116 GILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 116 G~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
|+..+.-..+|-+++.++|+++.+...-.+-.|+.++++++-++|.|+..+-..++..+|..+
T Consensus 218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 455566777899999999999999998889999999999999999999999988888877665
No 31
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=89.65 E-value=4.1 Score=38.06 Aligned_cols=69 Identities=10% Similarity=0.126 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 110 SVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 110 ~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
...+..|+..+.-.++|.+++.++|.++-|++.-.+-.++.++++++-.+++|+..+-..++..++..+
T Consensus 214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 445555667778889999999999999999999999999999999999999999966666665444443
No 32
>PRK11689 aromatic amino acid exporter; Provisional
Probab=88.53 E-value=1.7 Score=40.52 Aligned_cols=65 Identities=11% Similarity=0.089 Sum_probs=58.9
Q ss_pred HHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhee
Q 041591 115 VGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLL 179 (306)
Q Consensus 115 lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL 179 (306)
.|+-.+.-.++|.+++.++|.++.|.+...+-.|++++++++..+++|+..+-..++..+|..+.
T Consensus 221 ~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 221 AAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 45567778899999999999999999999999999999999999999999999999888887664
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=82.94 E-value=4.3 Score=39.11 Aligned_cols=81 Identities=22% Similarity=0.140 Sum_probs=60.2
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhh-hhhhhhhhhhHHHHHHHhcccCC--hhH--HHHHHHHHHhhheeee
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFS-LITASQLAFNSLFSYFLNKQKFT--PYI--VNCLVLLTISSTLLVF 181 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~S-Li~atQLaFtaiFs~~i~~qKfT--~~i--iNsVVLLT~sa~lL~l 181 (306)
+.+...+.-|+.-+.-+..--.+..++.||..- +-...||..|++.+.++-.+-=| .++ +-+++++.+++.+-+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 677788888998888888777777777666443 33488999999999987755333 333 5588999999999888
Q ss_pred eCCCCC
Q 041591 182 QNDSEN 187 (306)
Q Consensus 182 ~s~sd~ 187 (306)
++++|+
T Consensus 123 ~~~~~~ 128 (269)
T PF06800_consen 123 QDKKSD 128 (269)
T ss_pred cccccc
Confidence 775544
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=82.37 E-value=1.8 Score=38.59 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=109.6
Q ss_pred HHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCcccccee
Q 041591 118 LLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSKRKYA 197 (306)
Q Consensus 118 l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~~kY~ 197 (306)
+...+|.+.-+.+.++...++... -.|..-++++...+.+.|++...+=+..++..+......++..++. ...+...
T Consensus 8 ~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~--~~~g~~~ 84 (222)
T TIGR00803 8 IIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT--LMFGNPV 84 (222)
T ss_pred HHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc--cccccHH
Confidence 445566666677777767777777 8899999999999999999998888888888887776554433222 1112334
Q ss_pred eeeeh----------------hhHHHHHHHHHhHHHHHH-----HHHhhhhhcccCccchHHHHhhccCCce--------
Q 041591 198 IGFIL----------------EAFTAILDMVLYPYFAAS-----CAILVGLFVSREWVNLKREMEEYKLGKL-------- 248 (306)
Q Consensus 198 iGf~~----------------~tf~~VlemQi~~s~vAT-----~~~~VGl~asgef~~l~~E~~~F~~G~~-------- 248 (306)
.|..+ ..++. =|+-.+...+.. .....|+..+ |++..++ .+|-.|-.
T Consensus 85 ~g~~~~l~a~~~~~~~~~y~e~~~k~-~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ 160 (222)
T TIGR00803 85 VGLSAVLSALLSSGFAGVYFEKILKD-GDTMFWSRNLQLPLFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTAVWIVGL 160 (222)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHcccC-CCCchHHHHHHHHHHHHHHHHHHHhhc-ccchhhc--cCcccCCchHHHHHHH
Confidence 44433 00110 022222222222 2223333322 2211111 12222322
Q ss_pred ----EEeecchhhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHh
Q 041591 249 ----YAIGSTGLIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWG 302 (306)
Q Consensus 249 ----~~vG~vGlIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWG 302 (306)
..+=+-+++-..++..-+++.++..-++-++.+++|+++++....+...+.+-|
T Consensus 161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~ 218 (222)
T TIGR00803 161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLA 218 (222)
T ss_pred HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHee
Confidence 111234677888889999999999999999999999999999998887776543
No 35
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=81.95 E-value=6.4 Score=34.76 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=64.4
Q ss_pred hhhHHHHHHHHHHh-hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 107 NAPSVYVSVGILLA-ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 107 ~L~~~y~~lG~l~~-~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
+-......+|++.+ .--++|.+++.+.|.++.+.+..++..++.++++++-++++++..+-...+...+..+...+
T Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 44556666777777 47888999999999999999999999999999999999999999999998877777765443
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=80.95 E-value=3.4 Score=36.48 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=63.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeee
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVF 181 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l 181 (306)
|-...-+.-|+..|+.-++|=+++.-=++|--.=+-++..+|.++||.+.-++|.|.-++.=++|.++|+.++++
T Consensus 65 k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 65 KSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred ceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 333344455888899999999988887777777778888999999999999999999999999999999999865
No 37
>PRK11431 multidrug efflux system protein; Provisional
Probab=80.68 E-value=8.4 Score=31.95 Aligned_cols=64 Identities=17% Similarity=0.133 Sum_probs=55.0
Q ss_pred HHHhhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheee
Q 041591 117 ILLAANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLV 180 (306)
Q Consensus 117 ~l~~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~ 180 (306)
+..+..=++-+..+.++|+|+ |+.-...-.+.+++.+.++-+||+|+.-+-.+.++..|-+.+-
T Consensus 37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 334566677888899999997 7888888889999999999999999999999999998888763
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=80.19 E-value=0.5 Score=38.17 Aligned_cols=86 Identities=20% Similarity=0.306 Sum_probs=53.4
Q ss_pred HHHHHHHHhhhhhcccCccchHHHHhhccCCce-EEeecchh-h----hh-----hhhhhHHHHHhhccccceeeeeEEe
Q 041591 216 YFAASCAILVGLFVSREWVNLKREMEEYKLGKL-YAIGSTGL-I----FE-----TSSLFSNAIGIAGLPIVPVLAVVFF 284 (306)
Q Consensus 216 s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~-~~vG~vGl-I----f~-----vSSLfs~Vi~~~~lPv~~v~aVi~f 284 (306)
.+++..+..+.....|+.+++.+|+++ |+... ...|.+|. + |. ..+ ...++....-.++.+++.++|
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 5 YLFSVLFLLIILLIRGRLRDLFRALRR-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 345666777777778888888888877 22222 11122221 1 11 112 122333444444677899999
Q ss_pred ccCCchHHHHHHHHHHHhh
Q 041591 285 HDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 285 hD~f~g~K~vAl~laiWGF 303 (306)
|||++..|.++.+++.=|-
T Consensus 83 ~er~~~~~~~a~~l~~~Gv 101 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGV 101 (113)
T ss_pred cCCCCHHHHHHHHHHHHHH
Confidence 9999999999999987663
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=79.14 E-value=14 Score=30.39 Aligned_cols=131 Identities=18% Similarity=0.051 Sum_probs=88.9
Q ss_pred chhhhhhhheeec------CCcchhhHHHHhhcCchhHHHhhhcCCCCCCCCCccccccccchhhhhhhhcC-CCCccch
Q 041591 35 AAAILLGRQYYDK------GGNSKWLSTLAQFGGFPILLLSYCINPPRRKCKNTEIVFVHTKRLFFFILVSG-YSTSILN 107 (306)
Q Consensus 35 ~~a~LL~R~Yf~~------GG~skWlst~vQtaGfPlLl~pl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~p~~~~ 107 (306)
+.-..+.+.++.+ +-+..=+....+..++++++|+.++.-..+..++... . .. .....++
T Consensus 13 al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~-------~------~~~~~~~~~~ 79 (153)
T PF03151_consen 13 ALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSE-------I------FGEELSSDPN 79 (153)
T ss_pred HHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH-------h------hhhhhcchHH
Confidence 3344455555555 2333446677788899998887776522221111000 0 00 0001235
Q ss_pred hhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 108 APSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 108 L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
....-+.-|++--+.|+-.-+-+.+...-|++.+-...-.++.+++.++-++++|+..+-.+++..+|..+
T Consensus 80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 55556666777777888877788888888999999999999999999999999999999999988887765
No 40
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=78.12 E-value=9.4 Score=31.97 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=55.6
Q ss_pred HHHHhhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhee
Q 041591 116 GILLAANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLL 179 (306)
Q Consensus 116 G~l~~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL 179 (306)
-+..+..-++-|..+.++|+|+ |+.-...-.+.+++.+.++-+||+|+.-+-.+.++..|-+++
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4555667788899999999997 778888888999999999999999999999999998887764
No 41
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=76.16 E-value=14 Score=30.81 Aligned_cols=63 Identities=16% Similarity=0.278 Sum_probs=52.5
Q ss_pred hhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 120 AANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 120 ~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
+..=++.+..+..+|+|+ |+.-...-.+.+++.+.++-+||+|..-+-.+.++.+|-+++-+.
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 334455688889999997 666677788889999999999999999999999999998887443
No 42
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=75.55 E-value=2 Score=33.15 Aligned_cols=89 Identities=13% Similarity=0.246 Sum_probs=55.5
Q ss_pred HHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccCCce---EEeecc----hhh------hhhhhhhHHHHHhhcccc
Q 041591 209 LDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKLGKL---YAIGST----GLI------FETSSLFSNAIGIAGLPI 275 (306)
Q Consensus 209 lemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~---~~vG~v----GlI------f~vSSLfs~Vi~~~~lPv 275 (306)
.++..+..++++. +.+-+...+..+ .++.+..+. ..+|.+ +-. -..+.-...++......+
T Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~ 93 (126)
T PF00892_consen 20 LSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVF 93 (126)
T ss_pred HHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 4566777777776 555555555554 222333322 122222 111 123444555666677778
Q ss_pred ceeeeeEEeccCCchHHHHHHHHHHHhh
Q 041591 276 VPVLAVVFFHDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 276 ~~v~aVi~fhD~f~g~K~vAl~laiWGF 303 (306)
+.+++++++||+++..|.+++++.+=|.
T Consensus 94 ~~i~~~~~~~e~~~~~~~~g~~l~~~g~ 121 (126)
T PF00892_consen 94 AAILGWLFLGERPSWRQIIGIILIIIGV 121 (126)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 8889999999999999999999988664
No 43
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=75.11 E-value=11 Score=32.12 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=54.7
Q ss_pred HHHHHHHHh-hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHH--HhcccCChhHHHHHHHHHHhhheeeeeC
Q 041591 112 YVSVGILLA-ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYF--LNKQKFTPYIVNCLVLLTISSTLLVFQN 183 (306)
Q Consensus 112 y~~lG~l~~-~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~--i~~qKfT~~iiNsVVLLT~sa~lL~l~s 183 (306)
++.+|+... ..-+++.+.+..+|+|+..=+.+.--++.++.+.. +-++++|+.-+--+++..+|-.+++.++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 444454433 34456778888999999886666666778888885 7899999999999999999999876543
No 44
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=72.84 E-value=12 Score=34.91 Aligned_cols=61 Identities=11% Similarity=-0.021 Sum_probs=53.6
Q ss_pred hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeee
Q 041591 121 ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVF 181 (306)
Q Consensus 121 ~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l 181 (306)
..-++|.+++.+++.++.|.+...+=.+.+++++++-.+++|+..+--.++..+|..+...
T Consensus 227 ~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 227 VGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 4556889999999999999999999999999999999999999999888888877766433
No 45
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=71.73 E-value=4.3 Score=36.19 Aligned_cols=127 Identities=15% Similarity=0.072 Sum_probs=79.9
Q ss_pred hhccchhhhhhhheeecCCcchhhHHHHhhcCchhHHHhhhcC--CCCCCCCCccccccccchhhhhhhhcCCCCccchh
Q 041591 31 LCCQAAAILLGRQYYDKGGNSKWLSTLAQFGGFPILLLSYCIN--PPRRKCKNTEIVFVHTKRLFFFILVSGYSTSILNA 108 (306)
Q Consensus 31 l~G~~~a~LL~R~Yf~~GG~skWlst~vQtaGfPlLl~pl~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~L 108 (306)
+.+++...=+.+.|.+++=|++=..-+.|...-|+..++..+. ......... ..+.....
T Consensus 90 ~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 151 (222)
T TIGR00803 90 VLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLIS------------------NFGFFIGY 151 (222)
T ss_pred HHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhh------------------ccCcccCC
Confidence 3344444556777888764333244566777777766654221 011000000 00001011
Q ss_pred hHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHh
Q 041591 109 PSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTIS 175 (306)
Q Consensus 109 ~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~s 175 (306)
......++++.+....+-++-+.|..-.|.+.+.+..-.++++.|.++-++++|+..+-.+.+...+
T Consensus 152 ~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~ 218 (222)
T TIGR00803 152 PTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLA 218 (222)
T ss_pred chHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHee
Confidence 1233444566777777888889999999999999999999999999999999999888776665444
No 46
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=69.73 E-value=6.3 Score=39.27 Aligned_cols=183 Identities=20% Similarity=0.271 Sum_probs=108.7
Q ss_pred ccchhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeC
Q 041591 104 SILNAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQN 183 (306)
Q Consensus 104 ~~~~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s 183 (306)
..+|++.. |+-.|.|==+-.|++.|.|+|-|+..=||-++|-.+||.+.-=+|+... .-.+|++....+.+-.-.
T Consensus 83 ~Lr~~aPt----alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~-L~l~v~lI~~Glflft~K 157 (349)
T KOG1443|consen 83 YLRRLAPT----ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA-LVLIVLLIAVGLFLFTYK 157 (349)
T ss_pred HHHHhhhh----hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH-HHHHHHHHhhheeEEEec
Confidence 44555554 4556666667779999999999999999999999999999999999744 444444433333332222
Q ss_pred CCCCCCCccccceeeeeeh---------------------------hhHHHHHHHHHhHHHHHHHHHhhhhhcccCccch
Q 041591 184 DSENSTGVSKRKYAIGFIL---------------------------EAFTAILDMVLYPYFAASCAILVGLFVSREWVNL 236 (306)
Q Consensus 184 ~sd~~~g~s~~kY~iGf~~---------------------------~tf~~VlemQi~~s~vAT~~~~VGl~asgef~~l 236 (306)
++| =-+.||.. ..+.++-.+|-.|++. ....++...|-....
T Consensus 158 sTq--------f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~---Ll~~~l~fEG~~~~~ 226 (349)
T KOG1443|consen 158 STQ--------FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIG---LLPLSLLFEGLHLIT 226 (349)
T ss_pred ccc--------eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHH---HHHHHHHHcccccch
Confidence 222 23456654 4567777788777653 334456666665554
Q ss_pred HHHH-hhccCCce-EEeecc---h------------hhhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHH
Q 041591 237 KREM-EEYKLGKL-YAIGST---G------------LIFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLA 299 (306)
Q Consensus 237 ~~E~-~~F~~G~~-~~vG~v---G------------lIf~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~la 299 (306)
..+. ++++.|.. ..+|-+ | ++-.+|++..++..-+=--.+-++|++.-+|..+--...-+.+|
T Consensus 227 ~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~ 306 (349)
T KOG1443|consen 227 SSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAIC 306 (349)
T ss_pred hhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHH
Confidence 3333 34444443 111111 1 11234555555544444444556667777777776666666666
Q ss_pred HHh
Q 041591 300 IWG 302 (306)
Q Consensus 300 iWG 302 (306)
+=|
T Consensus 307 ~ag 309 (349)
T KOG1443|consen 307 LAG 309 (349)
T ss_pred HHH
Confidence 543
No 47
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.75 E-value=1.8 Score=43.01 Aligned_cols=59 Identities=20% Similarity=0.295 Sum_probs=50.1
Q ss_pred cccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCC
Q 041591 130 LLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENS 188 (306)
Q Consensus 130 l~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~ 188 (306)
+.|-|.|--+=+-|.|..++|++|..++|+|+|-.-.-.-+|--+|++++..|+..+++
T Consensus 85 YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~ 143 (335)
T KOG2922|consen 85 YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE 143 (335)
T ss_pred HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence 45567766666778899999999999999999999998889999999999999865544
No 48
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=68.74 E-value=14 Score=37.65 Aligned_cols=191 Identities=15% Similarity=0.207 Sum_probs=130.7
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
+..-....+..+=-+-||.|--++.|=.|+...++.||.=-||..++.+..-.|||..=+-+|.+ .++.+++....||.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~-si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFV-SIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHH-hhccEEEEEecccc
Confidence 34455556667778899999999999999999999999999999999999999999888877665 55555555555665
Q ss_pred CCCCccccceeeeeeh-------------------hhHHHHHHHHHhHHHHHHHHHhhh---hhcccCccchHHHHhhcc
Q 041591 187 NSTGVSKRKYAIGFIL-------------------EAFTAILDMVLYPYFAASCAILVG---LFVSREWVNLKREMEEYK 244 (306)
Q Consensus 187 ~~~g~s~~kY~iGf~~-------------------~tf~~VlemQi~~s~vAT~~~~VG---l~asgef~~l~~E~~~F~ 244 (306)
..++...++-.+|=.. ...-.=++||..-+++.-.=-+.+ ++.=.-+ + .|+|+
T Consensus 236 ~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~---~--~e~F~ 310 (416)
T KOG2765|consen 236 QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF---G--EERFE 310 (416)
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh---c--cCccc
Confidence 5555566666777655 112135678887776653333322 2222111 1 23443
Q ss_pred CCce------EEeecchh----------hhhhhhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhh
Q 041591 245 LGKL------YAIGSTGL----------IFETSSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 245 ~G~~------~~vG~vGl----------If~vSSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF 303 (306)
.-.. ...|.+|- ++++|+|.+.+=+++.+|+.-++=++.=|.+++..-++.-+.-.-||
T Consensus 311 lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 311 LPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred CCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 3322 34445553 36889999999999999998877777767788877766555444444
No 49
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.35 E-value=7.4 Score=38.46 Aligned_cols=167 Identities=17% Similarity=0.253 Sum_probs=106.5
Q ss_pred HhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCccccceeeeeeh----
Q 041591 127 SVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSKRKYAIGFIL---- 202 (306)
Q Consensus 127 s~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~~kY~iGf~~---- 202 (306)
+.++.|+||+++.++=..--.++++-=..+-+.|++.-..-|++++-+++...+..+.+.+.. |+.+
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~---------gY~w~~~n 165 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLR---------GYSWALAN 165 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecch---------hHHHHHHH
Confidence 467899999999999998899999999999999999999999999999999877776554432 3333
Q ss_pred ----hhHHHH------------HHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhc-cCCceEEeecchhhh----hh-
Q 041591 203 ----EAFTAI------------LDMVLYPYFAASCAILVGLFVSREWVNLKREMEEY-KLGKLYAIGSTGLIF----ET- 260 (306)
Q Consensus 203 ----~tf~~V------------lemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F-~~G~~~~vG~vGlIf----~v- 260 (306)
..|.+- -||-.|=++.+.....+=-+.-|||+++..|-... +.+..-.+..-|+.= ..
T Consensus 166 ~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 166 CLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 111111 12444566666677777777778887443332211 111111111111111 11
Q ss_pred -------hhhhHHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHh
Q 041591 261 -------SSLFSNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWG 302 (306)
Q Consensus 261 -------SSLfs~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWG 302 (306)
||+--.++++.-.=.+.+..+++++.+++..+.+.+++++-|
T Consensus 246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g 294 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG 294 (314)
T ss_pred HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence 222222222333334556677888899999999999998876
No 50
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=65.78 E-value=11 Score=35.09 Aligned_cols=60 Identities=13% Similarity=-0.071 Sum_probs=52.3
Q ss_pred hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheee
Q 041591 121 ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLV 180 (306)
Q Consensus 121 ~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~ 180 (306)
.-|.++-+++.+.+.+|.|.....+=.+++++++++..+++|+..+-..++...|..+..
T Consensus 233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 344677789999999999999999999999999999999999999988888777776643
No 51
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=62.45 E-value=19 Score=28.63 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=30.4
Q ss_pred HHhhhhHHHHhhcccccchhh-hhhhhhhhhhhHHHHHHHhcccCChhHHHHHHH
Q 041591 118 LLAANGFLYSVGLLYLPVSTF-SLITASQLAFNSLFSYFLNKQKFTPYIVNCLVL 171 (306)
Q Consensus 118 l~~~dn~lYs~Gl~YLPvST~-SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVL 171 (306)
..+..-++++..+.++|+|+. +.....-.+.+++.+.++-+|++|+.-+-.+.|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 445566899999999999985 666678888999999999999999887766554
No 52
>PRK13499 rhamnose-proton symporter; Provisional
Probab=61.17 E-value=26 Score=34.95 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCC--------hhHHHHHHHHHHhhh
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFT--------PYIVNCLVLLTISST 177 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT--------~~iiNsVVLLT~sa~ 177 (306)
+.....+.-|++=+.-|..+-.+..|+.+|. ..+-...||+++.++..++. +.++ -...-.++++.++.+
T Consensus 71 ~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~-gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 71 STLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIIN-GNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHH
Confidence 5667777789999999999999999999995 55778899999999987763 2333 236778888888888
Q ss_pred eeee
Q 041591 178 LLVF 181 (306)
Q Consensus 178 lL~l 181 (306)
+.+.
T Consensus 150 l~s~ 153 (345)
T PRK13499 150 IVGR 153 (345)
T ss_pred HHHH
Confidence 8877
No 53
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=57.54 E-value=34 Score=28.91 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=51.1
Q ss_pred hhhhHHHHhhcccccchh-hhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhee
Q 041591 120 AANGFLYSVGLLYLPVST-FSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLL 179 (306)
Q Consensus 120 ~~dn~lYs~Gl~YLPvST-~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL 179 (306)
+..=++.|..+.++|+|| |++--..--+-+++.+.++-+||+++.-+-.+.|+-.|-+.|
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 344467788889999997 678888888999999999999999999999999988877664
No 54
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=54.37 E-value=6.7 Score=38.78 Aligned_cols=122 Identities=20% Similarity=0.244 Sum_probs=78.3
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSE 186 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd 186 (306)
++.-..++.=.++..+|+ -+.|.||+-|=.==+--..||.+.+|.+-|||=+.+- +.+.+.+++|+.-+.|
T Consensus 104 ~vlplsvVfi~mI~fnnl----cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~-----~~~C~lIi~GF~lGvd 174 (347)
T KOG1442|consen 104 QVLPLSVVFILMISFNNL----CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA-----LGCCLLIILGFGLGVD 174 (347)
T ss_pred hhcchhheeeeehhccce----ehhhcceEEEEeccchhhhHHHHhHHhhccccccccc-----ceeehhheehheeccc
Confidence 333444444567888886 4778888877655556689999999999999977654 3444455555543322
Q ss_pred CCCCccccceeeeeeh---hhHHHHH-----------------HHHHhHHHHHHHHHhhhhhcccCccchHH
Q 041591 187 NSTGVSKRKYAIGFIL---EAFTAIL-----------------DMVLYPYFAASCAILVGLFVSREWVNLKR 238 (306)
Q Consensus 187 ~~~g~s~~kY~iGf~~---~tf~~Vl-----------------emQi~~s~vAT~~~~VGl~asgef~~l~~ 238 (306)
.. |.++.--++|-+. .++.+.+ ..-.|++..|....+-=+..+||++++-+
T Consensus 175 qE-~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~ 245 (347)
T KOG1442|consen 175 QE-GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG 245 (347)
T ss_pred cc-cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC
Confidence 21 2222223445443 2333333 34578999999999999999999966543
No 55
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=52.16 E-value=84 Score=31.42 Aligned_cols=148 Identities=14% Similarity=0.209 Sum_probs=105.9
Q ss_pred HHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCC
Q 041591 111 VYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTG 190 (306)
Q Consensus 111 ~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g 190 (306)
-|..+++---....+==-++-|+..-|..|-=|.-+.=..+-..++-|+|++.+=--+..|.|+|..+..+-+.+|.+..
T Consensus 85 ~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~ 164 (327)
T KOG1581|consen 85 KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSK 164 (327)
T ss_pred HHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccc
Confidence 45555555444444444568899888988888888888899999999999999999999999999999888766664433
Q ss_pred ccccceeeeeeh-------hhH-------------HHHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhccCCce--
Q 041591 191 VSKRKYAIGFIL-------EAF-------------TAILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEYKLGKL-- 248 (306)
Q Consensus 191 ~s~~kY~iGf~~-------~tf-------------~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F~~G~~-- 248 (306)
..+..-.+|+.+ ..| .--.+|-.++.+..++.+.++++-.|.|. ++=.|-+-..
T Consensus 165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~----~av~F~~~hp~~ 240 (327)
T KOG1581|consen 165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLL----PAVSFIKEHPDV 240 (327)
T ss_pred cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCc----hHHHHHHcChhH
Confidence 333345778776 111 22467889999999999999999888873 3333322111
Q ss_pred -------EEeecchhhhhhhh
Q 041591 249 -------YAIGSTGLIFETSS 262 (306)
Q Consensus 249 -------~~vG~vGlIf~vSS 262 (306)
+..|++|=+|.-+.
T Consensus 241 ~~Di~l~s~~gavGQ~FI~~T 261 (327)
T KOG1581|consen 241 AFDILLYSTCGAVGQLFIFYT 261 (327)
T ss_pred HHHHHHHHHhhhhhhheehhh
Confidence 67788887665543
No 56
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=49.54 E-value=25 Score=34.51 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCC
Q 041591 107 NAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDS 185 (306)
Q Consensus 107 ~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~s 185 (306)
|....+..-+++++.|=.+|-|+..-=-+=-.||=.=-.=.+|.+.+.+.-|+|+++.-+-||++-++|-...-.+.+|
T Consensus 70 ~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~ 148 (293)
T COG2962 70 KTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS 148 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8889999999999999999987654311111111111122377888888899999999999999999999887777653
No 57
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=47.49 E-value=1.1e+02 Score=26.21 Aligned_cols=107 Identities=21% Similarity=0.074 Sum_probs=72.2
Q ss_pred CCcchhhHHHHhhcCchhHHHhhhcCCCCCCCCCccccccccchhhhhhhhcCCCCccchhhHHHHHHHHHHhhhhHHHH
Q 041591 48 GGNSKWLSTLAQFGGFPILLLSYCINPPRRKCKNTEIVFVHTKRLFFFILVSGYSTSILNAPSVYVSVGILLAANGFLYS 127 (306)
Q Consensus 48 GG~skWlst~vQtaGfPlLl~pl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~L~~~y~~lG~l~~~dn~lYs 127 (306)
-|+.-|-+.+.+..|+-++++.+++...+ +.++- +..| + .+..=|++-+..-+...
T Consensus 27 ~gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~-----------------~~~p---~---w~~lGG~lG~~~V~~~~ 82 (138)
T PF04657_consen 27 LGSPLVASFISFGVGFILLLIILLITGRP-SLASL-----------------SSVP---W---WAYLGGLLGVFFVLSNI 82 (138)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHhccc-ccchh-----------------ccCC---h---HHhccHHHHHHHHHHHH
Confidence 34455556667889999988877765322 11100 1112 1 22224666666666677
Q ss_pred hhcccccchhh-hhhhhhhhhhhHHHHHH----HhcccCChhHHHHHHHHHHhhhe
Q 041591 128 VGLLYLPVSTF-SLITASQLAFNSLFSYF----LNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 128 ~Gl~YLPvST~-SLi~atQLaFtaiFs~~----i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
+....+.+++. .++.+.|+....+.-.+ ..|+|+|+.-+-.+.++.++..+
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77778887765 47889999999998876 78999999999999888887653
No 58
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=45.81 E-value=1.7e+02 Score=25.81 Aligned_cols=74 Identities=12% Similarity=0.220 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhhhHHHHhhcccc-----cchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCC
Q 041591 111 VYVSVGILLAANGFLYSVGLLYL-----PVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDS 185 (306)
Q Consensus 111 ~y~~lG~l~~~dn~lYs~Gl~YL-----PvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~s 185 (306)
++..+++......-.|.+...+. |++|-+|..+.=|++-.-+-+-.+..|. +.+.++
T Consensus 7 lF~~l~~Ff~~~~~vY~~~t~~~~~~~E~~Gt~aL~ls~~l~~mig~yl~~~~rr~------------------~~rPED 68 (137)
T PF12270_consen 7 LFYGLAVFFLVVAVVYGFWTKWSGDGGEWVGTVALVLSGGLALMIGFYLRFTARRI------------------GPRPED 68 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhC------------------CCCCcc
Confidence 44556777777788888888776 9999999999988876666555565655 345555
Q ss_pred CCCCCccccceeeeeeh
Q 041591 186 ENSTGVSKRKYAIGFIL 202 (306)
Q Consensus 186 d~~~g~s~~kY~iGf~~ 202 (306)
++.++++++.--.||..
T Consensus 69 ~~daEI~dgAGe~GfFs 85 (137)
T PF12270_consen 69 REDAEIADGAGELGFFS 85 (137)
T ss_pred ccccccccCCCCcCcCC
Confidence 55567888888899986
No 59
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=41.93 E-value=33 Score=32.81 Aligned_cols=78 Identities=17% Similarity=0.262 Sum_probs=63.5
Q ss_pred HHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCcccccee
Q 041591 118 LLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSKRKYA 197 (306)
Q Consensus 118 l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~~kY~ 197 (306)
+-...||+|-.++.-+..|..|-|.+-+=||--+.|.+.-+.+|.-+-+-++++-.-|-++.+.- +.+++.-+
T Consensus 62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~-------DN~~a~e~ 134 (290)
T KOG4314|consen 62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA-------DNEHADEI 134 (290)
T ss_pred EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec-------cchhhhhh
Confidence 34567999999999999999999999999999999999999999999999998876666666532 22244456
Q ss_pred eeeeh
Q 041591 198 IGFIL 202 (306)
Q Consensus 198 iGf~~ 202 (306)
+|..|
T Consensus 135 iGi~~ 139 (290)
T KOG4314|consen 135 IGIAC 139 (290)
T ss_pred hhHHH
Confidence 77776
No 60
>PRK13499 rhamnose-proton symporter; Provisional
Probab=41.54 E-value=1.3e+02 Score=29.96 Aligned_cols=77 Identities=12% Similarity=0.147 Sum_probs=53.6
Q ss_pred cchhhHHHHHHHHHHhhhhHHHHhhcccccchhh--hhhhhhhhh--hhHHHHHHHhcccCC------hhHHHHHHHHHH
Q 041591 105 ILNAPSVYVSVGILLAANGFLYSVGLLYLPVSTF--SLITASQLA--FNSLFSYFLNKQKFT------PYIVNCLVLLTI 174 (306)
Q Consensus 105 ~~~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~--SLi~atQLa--FtaiFs~~i~~qKfT------~~iiNsVVLLT~ 174 (306)
..|-.+.++.-|++-+..|+.|.+|-..+++++. |...+-|+. +..+=.. +-|++=+ ..++--++++.+
T Consensus 256 ~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~ 334 (345)
T PRK13499 256 LITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIIL 334 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHH
Confidence 3477788899999999999999999999988765 444555554 2222233 3555444 566677777777
Q ss_pred hhheeeee
Q 041591 175 SSTLLVFQ 182 (306)
Q Consensus 175 sa~lL~l~ 182 (306)
|+.++++.
T Consensus 335 g~~lig~~ 342 (345)
T PRK13499 335 AANIVGLG 342 (345)
T ss_pred HHHHHhhc
Confidence 77777665
No 61
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=39.59 E-value=3.9e+02 Score=26.49 Aligned_cols=147 Identities=14% Similarity=0.042 Sum_probs=84.2
Q ss_pred CccccchhHHHHHHHHHHhhccchhhhhhhheeecCCcchhhHHHHhhcCchhHHHhhhcCCCCCCCCCccccccccchh
Q 041591 13 RSRNHLRWIRIGILASFVLCCQAAAILLGRQYYDKGGNSKWLSTLAQFGGFPILLLSYCINPPRRKCKNTEIVFVHTKRL 92 (306)
Q Consensus 13 ~~k~~~~w~lv~i~~~~ll~G~~~a~LL~R~Yf~~GG~skWlst~vQtaGfPlLl~pl~~~~~~~~~~~~~~~~~~~~~~ 92 (306)
.+++....+++++..++-.+. ..+.+.. .++-++.=.-.++-.-|+.+..+...+..++. -. +
T Consensus 163 ~~~~i~GDll~l~~a~lya~~----nV~~E~~-v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~-i~--~--------- 225 (334)
T PF06027_consen 163 GSNPILGDLLALLGAILYAVS----NVLEEKL-VKKAPRVEFLGMLGLFGFIISGIQLAILERSG-IE--S--------- 225 (334)
T ss_pred CCccchhHHHHHHHHHHHHHH----HHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHHheehhh-hh--c---------
Confidence 344555566666555554443 3345543 44444444457788888888877766652221 10 0
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHH
Q 041591 93 FFFILVSGYSTSILNAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLL 172 (306)
Q Consensus 93 ~~~~l~~~~~p~~~~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLL 172 (306)
. + ...+....+++-.+.+.....+-.+.+.+-..-...|=..|-=-++.++..++-++|++..-+-+.++.
T Consensus 226 ~------~---w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lI 296 (334)
T PF06027_consen 226 I------H---WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALI 296 (334)
T ss_pred c------C---CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 0 0 112333344444444444433434444333332233333344456789999999999999999999999
Q ss_pred HHhhheeeeeCCC
Q 041591 173 TISSTLLVFQNDS 185 (306)
Q Consensus 173 T~sa~lL~l~s~s 185 (306)
.+|-++..+.+..
T Consensus 297 iiG~vvy~~~~~~ 309 (334)
T PF06027_consen 297 IIGFVVYNLAESP 309 (334)
T ss_pred HHHhheEEccCCc
Confidence 9999998876643
No 62
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=37.62 E-value=9 Score=36.48 Aligned_cols=39 Identities=33% Similarity=0.544 Sum_probs=32.8
Q ss_pred HHHHHhhccccceeeeeEEeccCCchHHHHHHHHHHHhh
Q 041591 265 SNAIGIAGLPIVPVLAVVFFHDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 265 s~Vi~~~~lPv~~v~aVi~fhD~f~g~K~vAl~laiWGF 303 (306)
+.-+.+|--..+-+++.++.+|+|.++|++|-++++=|-
T Consensus 82 asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~Gi 120 (290)
T KOG4314|consen 82 ASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGI 120 (290)
T ss_pred hHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcE
Confidence 344566667778899999999999999999999998764
No 63
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=36.45 E-value=58 Score=29.40 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHH
Q 041591 110 SVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFL 156 (306)
Q Consensus 110 ~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i 156 (306)
..-+.+|+..+.-.++|.+|+.|+|.++.++..-.+=.++++++.++
T Consensus 209 ~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 209 LLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 33445677788889999999999999999999999999999998764
No 64
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=33.70 E-value=1.1e+02 Score=29.58 Aligned_cols=65 Identities=11% Similarity=0.005 Sum_probs=56.6
Q ss_pred HHHHHhhhhHHHH----hhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhee
Q 041591 115 VGILLAANGFLYS----VGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLL 179 (306)
Q Consensus 115 lG~l~~~dn~lYs----~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL 179 (306)
..+..+.-.++|. +++..++..|.|....-+=.+..++|.++-++++|+..+--.++...|..+.
T Consensus 278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 3566788888888 4999999999999999999999999999999999999998888877776553
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=33.45 E-value=12 Score=30.86 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=23.5
Q ss_pred eeeeeEEeccCCchHHHHHHHHHHHhh
Q 041591 277 PVLAVVFFHDKMHGLKVIAMVLAIWGF 303 (306)
Q Consensus 277 ~v~aVi~fhD~f~g~K~vAl~laiWGF 303 (306)
.++++++|||+++..|.+.+.+.+-|.
T Consensus 78 ~~~~~l~f~E~ls~~~~~Gi~lii~Gv 104 (111)
T PRK15051 78 TLAAVKLWHEPVSPRHWCGVAFIIGGI 104 (111)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 457888999999999999999988774
No 66
>PF08636 Pkr1: ER protein Pkr1; InterPro: IPR013945 Pkr1 has been identified as an ER protein of unknown function.
Probab=32.65 E-value=47 Score=26.51 Aligned_cols=46 Identities=28% Similarity=0.376 Sum_probs=38.6
Q ss_pred cccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 132 YLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 132 YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
+=|=+|..++++++..|.+++-.++.--=.|+ ++--++|+.++..|
T Consensus 13 ftPG~tp~li~a~n~sF~~L~~~l~~Ll~~t~-niHfivL~~l~~~L 58 (75)
T PF08636_consen 13 FTPGTTPTLIIATNVSFAALFLVLLALLFLTY-NIHFIVLSFLALGL 58 (75)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHH
Confidence 44666778999999999999988888777787 88999999888776
No 67
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=25.19 E-value=1.5e+02 Score=25.19 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=48.8
Q ss_pred HHhhhhHHHHhhcccccchhhhhhh-hhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhhe
Q 041591 118 LLAANGFLYSVGLLYLPVSTFSLIT-ASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTL 178 (306)
Q Consensus 118 l~~~dn~lYs~Gl~YLPvST~SLi~-atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~l 178 (306)
+-.....+|-+.+.--|+|.-.=++ |.+.+||++.++++-++...+-.+-=+.|...|.++
T Consensus 50 lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 50 LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 4456677888888888999888887 999999999999999988887776666666555544
No 68
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=24.79 E-value=2.5e+02 Score=27.89 Aligned_cols=118 Identities=13% Similarity=0.057 Sum_probs=66.5
Q ss_pred ccccCccccchhHHHHHHHHHHhhccchhhhhhhheeecCCcchhhHHHHhhcCchh---HHHhhhcCCCCCCCCCcccc
Q 041591 9 LTVNRSRNHLRWIRIGILASFVLCCQAAAILLGRQYYDKGGNSKWLSTLAQFGGFPI---LLLSYCINPPRRKCKNTEIV 85 (306)
Q Consensus 9 ~~~~~~k~~~~w~lv~i~~~~ll~G~~~a~LL~R~Yf~~GG~skWlst~vQtaGfPl---Ll~pl~~~~~~~~~~~~~~~ 85 (306)
.+.|.+.+.++-.....+..+++++.+.++++|+++.. -|+.-..-+.|--+ +.+|....|..+++.+..
T Consensus 91 ~s~P~~~~~~~i~~tF~~ssIlLl~~Siss~iG~YiLa-----pl~~~i~~~~gAaila~iviP~~~~y~ln~~~~s~-- 163 (299)
T PF05884_consen 91 TSPPEKLSTSSIVETFSWSSILLLGFSISSFIGGYILA-----PLFGIIFGPFGAAILAYIVIPLIAYYYLNKEDGSL-- 163 (299)
T ss_pred cCCCcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhcchhHHHHHHHHHHHHHHhhcccccCch--
Confidence 33477777777788888888999999999998887753 35554444444433 345555544222211100
Q ss_pred ccccchhhhhhhhcCCCCccchhhHHHHHHHHHHhhhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHH
Q 041591 86 FVHTKRLFFFILVSGYSTSILNAPSVYVSVGILLAANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFL 156 (306)
Q Consensus 86 ~~~~~~~~~~~l~~~~~p~~~~L~~~y~~lG~l~~~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i 156 (306)
.. +.-.++..++.=|+|+|+- ++|+-++.-=+.+=|+++=+-+..+..
T Consensus 164 --------------~~--~R~~ll~~a~~QGvL~Ga~-------ls~~~l~sePf~~LT~iv~sfi~~~i~ 211 (299)
T PF05884_consen 164 --------------AE--SRLALLFFALFQGVLVGAG-------LSHLYLSSEPFIALTPIVSSFIYPLIA 211 (299)
T ss_pred --------------HH--HHHHHHHHHHHHHHHHHHH-------hhcccccCCcHHHHHHHHHHHHHHHHc
Confidence 00 0013567777778888853 344433334455556665333333333
No 69
>PRK01844 hypothetical protein; Provisional
Probab=24.41 E-value=39 Score=26.89 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHhhccchhhhhhhheeec
Q 041591 20 WIRIGILASFVLCCQAAAILLGRQYYDK 47 (306)
Q Consensus 20 w~lv~i~~~~ll~G~~~a~LL~R~Yf~~ 47 (306)
|+.+.+-++.+++|-.+|-.+.|-|+.+
T Consensus 4 ~~~I~l~I~~li~G~~~Gff~ark~~~k 31 (72)
T PRK01844 4 WLGILVGVVALVAGVALGFFIARKYMMN 31 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677789999999999999999875
No 70
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=24.00 E-value=1.7e+02 Score=29.49 Aligned_cols=61 Identities=18% Similarity=0.335 Sum_probs=49.4
Q ss_pred hhhHHHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeee
Q 041591 121 ANGFLYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQ 182 (306)
Q Consensus 121 ~dn~lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~ 182 (306)
+..+|| .|+.|-.+|.|-.+=-+-++|+++||.-.-++++++.-+-++.-...|-+..|..
T Consensus 99 gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 99 GSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred hhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 344555 5677777777777778889999999999999999999999988888887777765
No 71
>KOG3787 consensus Glutamate/aspartate and neutral amino acid transporters [Amino acid transport and metabolism]
Probab=22.81 E-value=1.7e+02 Score=30.82 Aligned_cols=90 Identities=20% Similarity=0.154 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhheeeeeC-CCCCCCCcccc-ceeeeeehhhHHHHHHHHHhHHHHHHHHHhhhhhcccCccchHHHHhhc
Q 041591 166 VNCLVLLTISSTLLVFQN-DSENSTGVSKR-KYAIGFILEAFTAILDMVLYPYFAASCAILVGLFVSREWVNLKREMEEY 243 (306)
Q Consensus 166 iNsVVLLT~sa~lL~l~s-~sd~~~g~s~~-kY~iGf~~~tf~~VlemQi~~s~vAT~~~~VGl~asgef~~l~~E~~~F 243 (306)
-|.++++|++++++|.-- ..=||.+.|+. ...++|==|-|--+|+|.+.+-.+.+.++-.+=.
T Consensus 15 ~N~LlllTv~~Vv~G~~lGf~LR~~~ls~~~i~yi~FPGElfmrmLkmmILPLI~SSlisgla~L--------------- 79 (507)
T KOG3787|consen 15 ENLLLLLTVSGVVLGVLLGFLLRPLSLSPDEIMYISFPGELLMRMLKMMILPLIVSSLISGLASL--------------- 79 (507)
T ss_pred hchhHHHHHHHHHHHHhhhheecCCCCChhheeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------
Confidence 588999999999887754 23455444443 3456676699999999999999999988753322
Q ss_pred cCCceEEeecchhhhhhhhhhHHHHHh
Q 041591 244 KLGKLYAIGSTGLIFETSSLFSNAIGI 270 (306)
Q Consensus 244 ~~G~~~~vG~vGlIf~vSSLfs~Vi~~ 270 (306)
+.+...-+|...++|+.++-+..++.-
T Consensus 80 Da~~sGrlg~~av~YY~~TT~~Av~lG 106 (507)
T KOG3787|consen 80 DAKASGRLGMRAVVYYMSTTIIAVILG 106 (507)
T ss_pred CccccccchHHHHHHHHHHHHHHHHHH
Confidence 222223489999999988777666543
No 72
>COG5615 Predicted integral membrane protein [Function unknown]
Probab=22.69 E-value=60 Score=29.25 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=47.5
Q ss_pred ccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhheeeeeCCCCCCCCccc
Q 041591 133 LPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISSTLLVFQNDSENSTGVSK 193 (306)
Q Consensus 133 LPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~lL~l~s~sd~~~g~s~ 193 (306)
=|.|.-++=..+|.+ +... +...+|.+|..-+|+++-++.+.+|.+-+....+..++
T Consensus 32 rPas~ka~~~~s~~~--~~lg--~I~rrF~~wvwatV~il~vsGv~~g~~~~~~gf~~lt~ 88 (161)
T COG5615 32 RPASYKALEDESRRT--KILG--IIGRRFGWWVWATVAILPVSGVYLGYEYIFGGFALLTT 88 (161)
T ss_pred cHhhhhhccCHHHHH--HHHH--HHHHHhHhHHhhhheeEEeccceeeeEEecCCcchhhh
Confidence 488888887788876 6666 77899999999999999999999999988777666654
No 73
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=21.17 E-value=4.7e+02 Score=25.86 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=61.6
Q ss_pred chhhHHHHHHHHHHhhhhH-HHHhhcccccchhhhhhhhhhhhhhHHHHHHHhcccCChhHHHHHHHHHHhhh
Q 041591 106 LNAPSVYVSVGILLAANGF-LYSVGLLYLPVSTFSLITASQLAFNSLFSYFLNKQKFTPYIVNCLVLLTISST 177 (306)
Q Consensus 106 ~~L~~~y~~lG~l~~~dn~-lYs~Gl~YLPvST~SLi~atQLaFtaiFs~~i~~qKfT~~iiNsVVLLT~sa~ 177 (306)
|.++......|++..+--| +==..+..+|-+||+.+.|-.=++.|+-..++-.|..|+--+-++++...+++
T Consensus 206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 4788888888998887665 33457889999999999999999999999999999999999888887766665
No 74
>PF11052 Tr-sialidase_C: Trans-sialidase of Trypanosoma hydrophobic C-terminal; InterPro: IPR021287 This is a highly conserved region, of about 50aa, that is the very C terminus of a number of more diverse proteins from Trypanosoma cruzi. All members of the family are annotated putatively as being trans-sialidase but this appears to be a diverse group.
Probab=20.73 E-value=54 Score=21.25 Aligned_cols=10 Identities=40% Similarity=1.318 Sum_probs=7.9
Q ss_pred HHHHHHhhcc
Q 041591 296 MVLAIWGFLS 305 (306)
Q Consensus 296 l~laiWGF~S 305 (306)
+++.+|||+.
T Consensus 15 lLLGLwGfaA 24 (25)
T PF11052_consen 15 LLLGLWGFAA 24 (25)
T ss_pred HHHHHHHHhh
Confidence 4789999974
No 75
>PRK10582 cytochrome o ubiquinol oxidase subunit IV; Provisional
Probab=20.62 E-value=50 Score=27.89 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=17.2
Q ss_pred CCCCccccceeeeeeh------hhHHHHHH
Q 041591 187 NSTGVSKRKYAIGFIL------EAFTAILD 210 (306)
Q Consensus 187 ~~~g~s~~kY~iGf~~------~tf~~Vle 210 (306)
+.+..+.|+|.+||+. ..|-+|+.
T Consensus 9 ~~~hgs~k~yviGFiLSliLT~i~F~lv~~ 38 (109)
T PRK10582 9 GASHGSVKTYMTGFILSIILTVIPFWMVMT 38 (109)
T ss_pred CcccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445688899999998 55666654
No 76
>PRK00523 hypothetical protein; Provisional
Probab=20.09 E-value=54 Score=26.12 Aligned_cols=28 Identities=7% Similarity=0.292 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHhhccchhhhhhhheeec
Q 041591 20 WIRIGILASFVLCCQAAAILLGRQYYDK 47 (306)
Q Consensus 20 w~lv~i~~~~ll~G~~~a~LL~R~Yf~~ 47 (306)
|+.+.+-++++++|-.+|--+.|.|+.+
T Consensus 5 ~l~I~l~i~~li~G~~~Gffiark~~~k 32 (72)
T PRK00523 5 GLALGLGIPLLIVGGIIGYFVSKKMFKK 32 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667778999999999999999875
Done!