Query 041596
Match_columns 252
No_of_seqs 169 out of 1192
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 08:48:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041596.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041596hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02159 Fe(2+) transport prot 100.0 8.2E-45 1.8E-49 331.0 23.9 235 10-251 4-241 (337)
2 KOG1558 Fe2+/Zn2+ regulated tr 100.0 1.5E-44 3.2E-49 326.9 19.8 216 33-251 2-233 (327)
3 TIGR00820 zip ZIP zinc/iron tr 100.0 7.4E-44 1.6E-48 324.4 18.2 218 34-251 1-228 (324)
4 PF02535 Zip: ZIP Zinc transpo 100.0 2.1E-31 4.5E-36 240.4 17.3 202 50-251 2-229 (317)
5 PRK04201 zinc transporter ZupT 99.8 5.4E-20 1.2E-24 163.5 14.8 165 58-250 13-179 (265)
6 COG0428 Predicted divalent hea 99.5 1.5E-13 3.2E-18 122.3 13.3 161 58-250 16-178 (266)
7 KOG3907 ZIP-like zinc transpor 99.0 2.1E-11 4.6E-16 104.9 -4.5 157 57-248 11-198 (303)
8 KOG2694 Putative zinc transpor 98.5 1.5E-06 3.3E-11 76.0 10.6 167 80-250 100-270 (361)
9 KOG2693 Putative zinc transpor 98.1 8E-06 1.7E-10 77.6 7.2 197 47-251 131-362 (453)
10 PF02535 Zip: ZIP Zinc transpo 96.3 0.023 5.1E-07 51.0 8.7 82 55-143 235-316 (317)
11 PRK04201 zinc transporter ZupT 95.6 0.11 2.4E-06 46.2 9.7 72 61-146 192-263 (265)
12 COG0428 Predicted divalent hea 93.8 0.4 8.7E-06 42.8 8.8 55 83-147 209-264 (266)
13 TIGR00820 zip ZIP zinc/iron tr 91.6 0.97 2.1E-05 41.5 8.3 83 59-145 238-322 (324)
14 KOG1558 Fe2+/Zn2+ regulated tr 91.4 1.1 2.3E-05 41.3 8.3 91 48-144 232-324 (327)
15 PLN02159 Fe(2+) transport prot 88.1 2.5 5.4E-05 39.1 8.0 87 55-145 247-335 (337)
16 KOG2693 Putative zinc transpor 73.6 1.2 2.6E-05 42.8 0.4 77 61-145 374-451 (453)
17 KOG2474 Zinc transporter and r 64.3 7.2 0.00016 36.6 3.3 29 81-109 72-100 (406)
18 COG5336 Uncharacterized protei 62.2 14 0.0003 28.6 4.0 52 44-97 39-90 (116)
19 COG2239 MgtE Mg/Co/Ni transpor 35.3 42 0.00092 32.3 3.6 84 52-145 359-444 (451)
20 PF07086 DUF1352: Protein of u 31.2 3.3E+02 0.0071 23.1 9.0 18 98-115 115-132 (186)
21 PF11283 DUF3084: Protein of u 30.5 95 0.0021 22.6 3.9 56 59-114 6-70 (79)
22 PF00822 PMP22_Claudin: PMP-22 29.7 1.6E+02 0.0035 23.2 5.8 19 124-142 143-161 (166)
23 PF07062 Clc-like: Clc-like; 29.6 3.7E+02 0.008 23.2 9.5 92 46-139 98-192 (211)
24 KOG4026 Uncharacterized conser 28.7 3.8E+02 0.0083 23.1 9.2 102 47-150 73-182 (207)
25 KOG1483 Zn2+ transporter ZNT1 28.3 4.5E+02 0.0098 25.0 8.9 31 86-116 76-106 (404)
26 PF05437 AzlD: Branched-chain 26.3 2.6E+02 0.0057 20.4 8.6 51 54-106 3-53 (99)
27 COG4317 Uncharacterized protei 26.2 2.1E+02 0.0045 21.1 5.0 47 88-151 4-50 (93)
28 PF13903 Claudin_2: PMP-22/EMP 24.9 3.4E+02 0.0073 21.2 10.0 55 87-142 104-165 (172)
29 KOG3907 ZIP-like zinc transpor 24.9 17 0.00036 32.3 -1.0 53 89-143 242-297 (303)
30 PRK08307 stage III sporulation 23.3 1.5E+02 0.0032 24.6 4.4 68 53-132 4-71 (171)
31 TIGR02833 spore_III_AB stage I 21.8 1.6E+02 0.0034 24.3 4.3 68 53-132 3-70 (170)
32 TIGR00400 mgtE Mg2+ transporte 20.9 2.1E+02 0.0046 27.3 5.6 18 59-76 398-415 (449)
33 TIGR02896 spore_III_AF stage I 20.7 2E+02 0.0043 22.0 4.3 49 87-152 5-54 (106)
No 1
>PLN02159 Fe(2+) transport protein
Probab=100.00 E-value=8.2e-45 Score=330.97 Aligned_cols=235 Identities=55% Similarity=0.905 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHhhc-cccccccccccCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHH
Q 041596 10 ETLITLLLLIISFAF-PALAQEQEQCRSESTGGCHDRAAALKFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVI 88 (252)
Q Consensus 10 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~ 88 (252)
.+.+++++++.++.+ ++.+.++++|+.+.+.+|.|+++.+++|++++++|+++|++|+++|++.|+.++.|.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~lki~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~ 83 (337)
T PLN02159 4 MKLVFILLILVSFAVSPATSTAPEECDSESANPCINKAKALPLKIIAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTI 83 (337)
T ss_pred HHHHHHHHHHHHHHcCccccCCCccccCCCCcCccCchhccchHHHHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHH
Confidence 345677777778777 4667788899997778999999999999999999999999999999999988888888999999
Q ss_pred HHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCC
Q 041596 89 VKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYYKRYCSKIAGQKTYSNSP 168 (252)
Q Consensus 89 ~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~ 168 (252)
++||++||+|||+|+|||||+.|.++++|++...|++||++++++++|+++++++|++.+.++++++..+ ...
T Consensus 84 ~~~FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~~~yP~~~~i~~~g~~l~~liE~~~~~~~~~~~~~~---~~~---- 156 (337)
T PLN02159 84 VKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVAMLSGLVTLAIDSMATSLYTSKNSVG---PMP---- 156 (337)
T ss_pred HHHHhhhHhHHHHHHHhhhHHHHhhhchhhcCCCcccCchHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---ccc----
Confidence 9999999999999999999999999999998888899999999999999999999999998775543210 000
Q ss_pred CcccCCCCCC--CCCCcchhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 041596 169 SVEMGHAKNE--QGHDEMNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQ 246 (252)
Q Consensus 169 ~~~~~~~~~~--h~~~~~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~i~~L~~AI~~Hk~~Eg~aLG~~l~~ 246 (252)
++.+.+.+.. +..++++++..|+++.++++++|+++||++||+++|++++.+.++++++||++||+|||+++|+++.+
T Consensus 157 ~h~h~~~~~~~~~~~~~~~~~~~r~~~~a~~l~~gl~lHS~~eGlalG~~~~~~~~~~l~~AI~~Hk~~eg~aLg~~L~~ 236 (337)
T PLN02159 157 DHGHSHGHGVVLKTKDDGNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQ 236 (337)
T ss_pred ccCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHhchhhhcCCCchhHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 0111111110 00011123456667788999999999999999999999988888999999999999999999999999
Q ss_pred CCCCC
Q 041596 247 VPDCI 251 (252)
Q Consensus 247 ~~~~~ 251 (252)
++++.
T Consensus 237 ~~~~~ 241 (337)
T PLN02159 237 AEYTN 241 (337)
T ss_pred ccCcH
Confidence 98863
No 2
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=326.86 Aligned_cols=216 Identities=42% Similarity=0.746 Sum_probs=176.3
Q ss_pred cccCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhh
Q 041596 33 QCRSESTGGCHDRAAALKFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDD 112 (252)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~ 112 (252)
+|.++ ++|.|+.....+|++++++||+.|++|+++|++.++.+..+++++.+++.+||++||||||+|+|||||++|.
T Consensus 2 ~~~~~--~~~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~ 79 (327)
T KOG1558|consen 2 DCQAP--ASCADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEA 79 (327)
T ss_pred Ccccc--ccccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHH
Confidence 45555 6899999999999999999999999999999999987777888999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--CCCCCCCCCCc------cc-----CCCCCCC
Q 041596 113 LRSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYYKRYCSKIA--GQKTYSNSPSV------EM-----GHAKNEQ 179 (252)
Q Consensus 113 l~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~-----~~~~~~h 179 (252)
+++.|...++|.+||++++++++||++++++|++++.++++++.++. +....+++++. .+ .++|. |
T Consensus 80 l~~~~~~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 158 (327)
T KOG1558|consen 80 LESLCLADNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGEHGAIHVGHSHG-H 158 (327)
T ss_pred hhcccccCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccCCccccCCCCCC-C
Confidence 99999998999999999999999999999999999999865544211 11111111110 00 11111 1
Q ss_pred CCC---cchhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041596 180 GHD---EMNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQVPDCI 251 (252)
Q Consensus 180 ~~~---~~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~~ 251 (252)
.++ ...+....+++.+++|++||++||+|||+++|++++.+++++|+.|+++||.+|||++|+|+.++++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~ 233 (327)
T KOG1558|consen 159 SEPSTPGVVDDGQASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTF 233 (327)
T ss_pred CCCCCccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccch
Confidence 111 001111125678999999999999999999999999999999999999999999999999999998764
No 3
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=100.00 E-value=7.4e-44 Score=324.39 Aligned_cols=218 Identities=53% Similarity=0.900 Sum_probs=177.1
Q ss_pred ccCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhh
Q 041596 34 CRSESTGGCHDRAAALKFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDL 113 (252)
Q Consensus 34 ~~~~~~~~~~~~~~~~~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l 113 (252)
|+.+.+.+|+|+++.+++|++++++||+.|++|+++|++.|+.++.+.+++++++++||++||||||+|+|||||++|.+
T Consensus 1 ~~~~~~~~~~~~~~~~~lki~~lfvil~~slig~~lP~i~~~~~~~~~~~~~~~~~k~FagGVfLATafvHLLp~a~e~l 80 (324)
T TIGR00820 1 CSHEDDNSCNNKEGALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEML 80 (324)
T ss_pred CCCccCCCCCCcccccccHHHHHHHHHHHHHHHHhhHHHhhhccccCCCcchhHHHHHhccceeeeeeeeeeccHHHHhh
Confidence 55554569999999999999999999999999999999888888888888999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC------CCCCCCCcccCCCCC-CCCC--C-c
Q 041596 114 RSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYYKRYCSKIAGQK------TYSNSPSVEMGHAKN-EQGH--D-E 183 (252)
Q Consensus 114 ~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~h~~--~-~ 183 (252)
+++|+++..|.+||++++++++|+++++++|++...+.++++....+.. +.++++..+.++.++ .|.+ + .
T Consensus 81 ~~~cl~~~~~~~yP~~~~i~~~g~~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (324)
T TIGR00820 81 SSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSYYERKHGKGDHGSKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNS 160 (324)
T ss_pred cCcccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccccccccCCCCCCCCCcccccccccccc
Confidence 9999988788999999999999999999999999988765432211100 011111000001011 0111 1 1
Q ss_pred chhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041596 184 MNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQVPDCI 251 (252)
Q Consensus 184 ~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~~ 251 (252)
+..+..|+++.+++|++|+++||++||+++|++++.+.++++++||++||+|||+++|+++.+++++.
T Consensus 161 ~~~~~~~~~~~~~~l~~gl~~Hs~~eGlalG~~~~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~ 228 (324)
T TIGR00820 161 EVVQLLRQRVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKC 228 (324)
T ss_pred chhhHHHHHHHHHHHHHHHHhcchhhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 12345678889999999999999999999999998888999999999999999999999999999874
No 4
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.97 E-value=2.1e-31 Score=240.42 Aligned_cols=202 Identities=20% Similarity=0.379 Sum_probs=148.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHH
Q 041596 50 KFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFT 129 (252)
Q Consensus 50 ~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~ 129 (252)
.+|+++++++++.+++|+++|++.++.++.|.+++++++++||++||||+++|+|||||++|.+++.-.......+||++
T Consensus 2 ~~ki~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~ 81 (317)
T PF02535_consen 2 GLKIVAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLA 81 (317)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhH
Confidence 47999999999999999999999887665567899999999999999999999999999999986532222244678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-cc--cccCC------CCCCC----C-----CC----cccCCCCCCC-CC--C-c
Q 041596 130 TFIAMLSAVVTLMVDSFAMSYYKRY-CS--KIAGQ------KTYSN----S-----PS----VEMGHAKNEQ-GH--D-E 183 (252)
Q Consensus 130 ~~i~~~Gf~l~~~iE~~~~~~~~~~-~~--~~~~~------~~~~~----~-----~~----~~~~~~~~~h-~~--~-~ 183 (252)
.+++++||++++++|++.+.+.++. .. ...+. .++++ . ++ .++.+.+.++ .+ . .
T Consensus 82 ~~~~~~Gfl~~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (317)
T PF02535_consen 82 FLIFLVGFLLFFFIERILHSIFEHDHSHSHDHSHSHSSSELNSDEPSNSVSSSEIEDDSNSEHSDQNSHHSHSSHSHSHH 161 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccCccccccccCCcccccccccccccccccccccc
Confidence 9999999999999999998776541 11 00000 00000 0 00 0000000000 00 0 0
Q ss_pred chhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041596 184 MNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQVPDCI 251 (252)
Q Consensus 184 ~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~~ 251 (252)
+..+..+....++++.+|+++||++||+++|++.+.+..+.+++||++||+||+++++.++.+++.+.
T Consensus 162 ~~~~~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~ 229 (317)
T PF02535_consen 162 DDKSGVSQNIRALILLIALSIHSFFEGLAIGAAFSSDSGWSLFIAIILHKIPEGFALGSILVKAGFSK 229 (317)
T ss_pred cccchhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhhHHHHHHHHHHhHhHHHhhhhhhhhhhcccc
Confidence 11122222234889999999999999999999988887899999999999999999999999988764
No 5
>PRK04201 zinc transporter ZupT; Provisional
Probab=99.84 E-value=5.4e-20 Score=163.54 Aligned_cols=165 Identities=16% Similarity=0.207 Sum_probs=118.4
Q ss_pred HHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHH
Q 041596 58 SILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSA 137 (252)
Q Consensus 58 ~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf 137 (252)
.-.+++.+|++++++.++ .+++++..+.+|++|||+++++.||+||++|.+++.. +....++.+...+++|+
T Consensus 13 l~~~~t~lGal~~~~~~~-----~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~---~~~~~~~~~~~~~~~G~ 84 (265)
T PRK04201 13 LAGLATGIGSLIAFFGKK-----PNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAY---GEGMGPWLGYGAFFGGI 84 (265)
T ss_pred HHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cccccHHHHHHHHHHHH
Confidence 344578888888887664 4678999999999999999999999999999875421 11134557777889999
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCcccCCCCCCCCCCcchhhhHhHHHHHHHHHHHHhhhhhHHHhhhccc-
Q 041596 138 VVTLMVDSFAMSYYKRYCSKIAGQKTYSNSPSVEMGHAKNEQGHDEMNTQLLRHRVVAQVLELGIVVHSVVIGMAMGAS- 216 (252)
Q Consensus 138 ~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~- 216 (252)
++++.+|++.++ ++.... ..++ +. +.+. +..+..+ ...+.+.+|+++|+++||+++|++
T Consensus 85 ll~~~ld~~~~~---~~~~~~---~~~~--------~~---~~~~-~~~~~~~--~~~~~~~~a~~lH~~~eGlalg~~~ 144 (265)
T PRK04201 85 LGIFLIDRLVPH---ENPHEL---MQKE--------EM---EFQQ-PLPKSLK--RTGILTALAISIHNFPEGIATFVAA 144 (265)
T ss_pred HHHHHHHHhccc---cCcccc---cccc--------cc---cccc-cchHHHH--HHHHHHHHHHHHHhcchhhhhhhhh
Confidence 999999998762 110000 0000 00 0000 0111122 246788999999999999999984
Q ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 041596 217 -DNPCTIRPLIAALCFHQLFEGMGLGGCILQVPDC 250 (252)
Q Consensus 217 -~~~~~i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~ 250 (252)
.+....+.+++||++||+|||++++..+..++.+
T Consensus 145 ~~~~~~g~~~~~aI~~H~iPeg~a~~~~l~~~~~s 179 (265)
T PRK04201 145 LSNPELGFPIALAIAIHNIPEGIAVAVPVYYATGS 179 (265)
T ss_pred hcchhhHHHHHHHHHHhcCcHHHHHHHHHHHccCc
Confidence 4555667889999999999999999999887754
No 6
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.52 E-value=1.5e-13 Score=122.27 Aligned_cols=161 Identities=18% Similarity=0.244 Sum_probs=111.8
Q ss_pred HHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHH
Q 041596 58 SILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSA 137 (252)
Q Consensus 58 ~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf 137 (252)
.-...+.+|...-++.. + +.++++......|++||++.+++.+++|++.|.....-. .....+| ....+..|.
T Consensus 16 l~~~~t~lG~~~~~~~~---~-~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~--~~~~~~~-~~~g~~~G~ 88 (266)
T COG0428 16 LAGLATALGALLVVLAV---R-KVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGD--STHEFLP-ALAGFLLGV 88 (266)
T ss_pred HHHHHHHHhHHHHHHhh---c-ccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccc--cchhhHH-HHHHHHHHH
Confidence 34445666665554431 1 467889999999999999999999999999997664211 1111123 223378899
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCcccCCCCCCCCCCcchhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccC
Q 041596 138 VVTLMVDSFAMSYYKRYCSKIAGQKTYSNSPSVEMGHAKNEQGHDEMNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASD 217 (252)
Q Consensus 138 ~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~ 217 (252)
++++.+|+++.+ ++..++. ++ ......+..| ..+.+.+++++|+++||+++|++.
T Consensus 89 ~~~~~~d~l~~h---~h~~~~~----------------~~---~~~~~~~~~~---~~~l~~lai~iHnfpEGlai~va~ 143 (266)
T COG0428 89 LFIFLLDRLVPH---EHEGKSV----------------EG---LEGLRKPNLR---RGFLLALAISLHNFPEGLAIGVAF 143 (266)
T ss_pred HHHHHHHHcCCc---cCCCCCc----------------cc---cccccCcchh---HHHHHHHHHHHhccchhHHHHHHH
Confidence 999999998772 1110000 00 0000111122 477889999999999999999986
Q ss_pred CCC--chhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 041596 218 NPC--TIRPLIAALCFHQLFEGMGLGGCILQVPDC 250 (252)
Q Consensus 218 ~~~--~i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~ 250 (252)
..+ ..+.+.+||.+||+|||++++.++..++.+
T Consensus 144 ~~~~~~gi~~alaI~ihnipEG~av~~pL~~~~~s 178 (266)
T COG0428 144 LSNPSLGIALALAIAIHNIPEGLAVALPLAGAGRS 178 (266)
T ss_pred hccchHHHHHHHHHHHhccccHHHHHHHHHhcCCc
Confidence 554 567789999999999999999999998855
No 7
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.95 E-value=2.1e-11 Score=104.90 Aligned_cols=157 Identities=22% Similarity=0.341 Sum_probs=106.0
Q ss_pred HHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCC--------------------
Q 041596 57 CSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSP-------------------- 116 (252)
Q Consensus 57 ~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~-------------------- 116 (252)
-.+|+++.+.|.+|++.... +.-+-..+-+++|.+.+|++.-++||..+.+..+
T Consensus 11 samlvgsylaG~IPL~~~~s------e~rl~lvtv~GAgll~gtAl~viIpegv~sly~~~~~~~~~g~~~~~~~~~~~v 84 (303)
T KOG3907|consen 11 SAMLVGSYLAGSIPLYYILS------EERLKLVTVLGAGLLVGTALTVIIPEGVSSLYVKIAVLSILGIGMLLGTSFMLV 84 (303)
T ss_pred HHHHHHHHHhcccceeeecc------hhheEEEEeecccceecceeEEEecccHHHHhhhHHHHhhhccchhccccccee
Confidence 46889999999999875431 1112245678899999999999999988876511
Q ss_pred -------CCCCCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCcccCCCCCCCCCCcchhhh
Q 041596 117 -------CLPDHPWKEF-PFTTFIAMLSAVVTLMVDSFAMSYYKRYCSKIAGQKTYSNSPSVEMGHAKNEQGHDEMNTQL 188 (252)
Q Consensus 117 -------~~~~~~~~~y-P~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 188 (252)
|.+.+...++ ...++...+||.+|+++||.-+.+.+++.+ .+.
T Consensus 85 Ip~~i~a~v~~~~~~~~~~~IG~slVLgfv~mLlVdqi~tv~~h~~v~-----------------------------~~a 135 (303)
T KOG3907|consen 85 IPEGIKAEVEHDGHVGVHALIGFSLVLGFVFMLLVDQIGTVYVHSNVK-----------------------------FQA 135 (303)
T ss_pred ccccceeeeeecCCcChheeeeHHHHHHHHHHHhhhccccEEEecccc-----------------------------hhh
Confidence 1111122233 245566788999999999876544322110 111
Q ss_pred HhHHHHHHHHHHHHhhhhhHHHhhhccc--CCCCc-hhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 041596 189 LRHRVVAQVLELGIVVHSVVIGMAMGAS--DNPCT-IRPLIAALCFHQLFEGMGLGGCILQVP 248 (252)
Q Consensus 189 ~~~~i~~~~L~~gis~HSv~eGlaLGv~--~~~~~-i~~L~~AI~~Hk~~Eg~aLG~~l~~~~ 248 (252)
.|+++.-...++|+.+|..-+|+|||.. ++.++ -+..|+||.+||.|.+|+|-+-+..++
T Consensus 136 ~rs~in~~t~tlgLvVHaaaDGVALGaaattn~~svqiIVfvAImlHKaPAafgLvSfll~e~ 198 (303)
T KOG3907|consen 136 GRSIINHITVTLGLVVHAAADGVALGAAATTNNDSVQIIVFVAIMLHKAPAAFGLVSFLLHEN 198 (303)
T ss_pred hhhccccceeEEEEEEeeccccceecccccccCCcEEEeehhHHHHhcccHHHHHHHHHHHhh
Confidence 2222222456799999999999999954 33333 356799999999999999998887765
No 8
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=98.47 E-value=1.5e-06 Score=76.03 Aligned_cols=167 Identities=13% Similarity=0.121 Sum_probs=99.6
Q ss_pred CCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-
Q 041596 80 QPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYYKRYCSKI- 158 (252)
Q Consensus 80 ~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~~~- 158 (252)
...++.+..+.+|+-|=+|+-.|+|||||+.|.-+. .|.. .....--+++++.|++....+|++...-.++++...
T Consensus 100 ~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~--~p~~-e~sl~siGLwVlaGiLtF~~ieK~f~ss~EE~~~q~p 176 (361)
T KOG2694|consen 100 SAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQ--DPSS-ENSLSSIGLWVLAGILTFSLIEKLFASSEEEQHKQSP 176 (361)
T ss_pred chhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCC--CCCC-CCchhhhhHHHHHHHHHHHHHHHHHhcchhhccccCC
Confidence 345778889999999999999999999999997522 1111 111122478999999999999998743222211110
Q ss_pred cCCCCCCCCCCcccCCCCC-CCCCCcchhhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCch--hHHHHHHHHHHHH
Q 041596 159 AGQKTYSNSPSVEMGHAKN-EQGHDEMNTQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCTI--RPLIAALCFHQLF 235 (252)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~i--~~L~~AI~~Hk~~ 235 (252)
+.+..+.-+-. ..++.-- +..+.+........++..|+=.++=++-++--|+|++.+.-.++- +-..+||.+|++|
T Consensus 177 ~~~~~~ac~~~-~g~~c~~r~~~q~~~~~~~q~~kvagYLNLlAN~iDNFtHGLAVa~SFLVS~k~GiltT~aILLHEIP 255 (361)
T KOG2694|consen 177 SAHFLNACGGA-CGKVCFLREQEQKSKERKEQPKKVAGYLNLLANIIDNFTHGLAVASSFLVSTKFGILTTIAILLHEIP 255 (361)
T ss_pred CcchhhHhhhc-cccceecchhhcccccccccchhHHHHHHHHHHhhhhhhhhhHHhhhhhhhhhhhHHHHHHHHHhhcc
Confidence 00000000000 0000000 000000000111234677888899999999999999987644332 3347899999999
Q ss_pred HHHHHHHHhhcCCCC
Q 041596 236 EGMGLGGCILQVPDC 250 (252)
Q Consensus 236 Eg~aLG~~l~~~~~~ 250 (252)
.-++==+.+.+++|.
T Consensus 256 HEvgDFAILLRagF~ 270 (361)
T KOG2694|consen 256 HEVGDFAILLRAGFG 270 (361)
T ss_pred chhhhhHHHHHhccc
Confidence 887766667777664
No 9
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=98.09 E-value=8e-06 Score=77.62 Aligned_cols=197 Identities=15% Similarity=0.171 Sum_probs=106.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHhH-HHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCc
Q 041596 47 AALKFKIIAVCSILVTSMIGVC-LPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKE 125 (252)
Q Consensus 47 ~~~~lKi~~i~~il~~sllg~~-lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~ 125 (252)
+.|..-++|.++|.+.++++.+ +|+..+. ...+..+.++.+++.|-+++=+++|++|+++......-.+ ....
T Consensus 131 ~~w~~g~~a~~lisl~~~l~l~lvP~~~~~----~~~~~~l~~l~a~a~gtL~gDa~lhLiP~~l~~~~~~~~~--~s~~ 204 (453)
T KOG2693|consen 131 ELWLYGILATLLISLAPLLGLLLVPLRKNS----KKKLELLIFLLALAVGTLLGDALLHLIPEALGFHSHLSNG--VSHV 204 (453)
T ss_pred eeEEechHHHHHHHHHHhhheeeccccccc----hhHHHHHHHHHHHHHhhhhHHHHhhhCchhcccccCccCC--cccc
Confidence 5666777788787777777765 4443222 1346788899999999999999999999999854431110 0001
Q ss_pred ch----------------HHHHHHHHHHHHHHHHHHHHHHHhhhccc-cccCCCCC-----CCC---CCcccC-CCCCCC
Q 041596 126 FP----------------FTTFIAMLSAVVTLMVDSFAMSYYKRYCS-KIAGQKTY-----SNS---PSVEMG-HAKNEQ 179 (252)
Q Consensus 126 yP----------------~~~~i~~~Gf~l~~~iE~~~~~~~~~~~~-~~~~~~~~-----~~~---~~~~~~-~~~~~h 179 (252)
++ +..++-..+...++..++......+.... ...+...+ .+. .+++.. +....+
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~~~gh~h~~~~~~~~~~e~~~~~~~~~~~d~~~~~ 284 (453)
T KOG2693|consen 205 TSLAMTGGKYHFFSNESNLSIFLAVLGVSLLFVTEKNMRALKGGGKHHGHSHGHSNTYNPGSEKITLNVKDGVGDSVSLS 284 (453)
T ss_pred cchhhcccceeeecccccceeeeeeechHHhhccccchhhccCCCCCCCccCCcCCCcCcccccccccccccCCCccccC
Confidence 00 00011111111112222211111110000 00000000 000 000000 000000
Q ss_pred CC----Ccch--hhhHhHHHHHHHHHHHHhhhhhHHHhhhcccCCCCc--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041596 180 GH----DEMN--TQLLRHRVVAQVLELGIVVHSVVIGMAMGASDNPCT--IRPLIAALCFHQLFEGMGLGGCILQVPDCI 251 (252)
Q Consensus 180 ~~----~~~~--~~~~~~~i~~~~L~~gis~HSv~eGlaLGv~~~~~~--i~~L~~AI~~Hk~~Eg~aLG~~l~~~~~~~ 251 (252)
.+ ..++ ...+ +..+|+..+|=.+|++.+|+|+|.+...+. .+...+|+..|++|.=++==+.+.++|++.
T Consensus 285 ~~~~~~~~~~~~~~~l--~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~ 362 (453)
T KOG2693|consen 285 SSSFEHKLEEFEVEEL--KKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSV 362 (453)
T ss_pred Ccchhcccccccccch--hhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcH
Confidence 00 0011 1122 247899999999999999999999976543 356688999999999887778888888753
No 10
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=96.28 E-value=0.023 Score=51.02 Aligned_cols=82 Identities=15% Similarity=0.240 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHH
Q 041596 55 AVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAM 134 (252)
Q Consensus 55 ~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~ 134 (252)
..++.-+.+-+|.++-++..........+.+..++.+|++|.|+.+++.+++||..+.-++ +..--+..+.++
T Consensus 235 ~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~-------~~~~~~~~~~~~ 307 (317)
T PF02535_consen 235 LLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHS-------RKSRLLKFLGFL 307 (317)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-------hHHHHHHHHHHH
Confidence 3334444566666666665222222345678899999999999999999999999986442 011135666778
Q ss_pred HHHHHHHHH
Q 041596 135 LSAVVTLMV 143 (252)
Q Consensus 135 ~Gf~l~~~i 143 (252)
+|+.+|.++
T Consensus 308 ~G~~~~~~l 316 (317)
T PF02535_consen 308 IGFLLMALL 316 (317)
T ss_pred HHHHHHHHH
Confidence 888888765
No 11
>PRK04201 zinc transporter ZupT; Provisional
Probab=95.56 E-value=0.11 Score=46.24 Aligned_cols=72 Identities=8% Similarity=0.088 Sum_probs=51.5
Q ss_pred HHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHHHHH
Q 041596 61 VTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSAVVT 140 (252)
Q Consensus 61 ~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf~l~ 140 (252)
+.+.+|+++-++..+. ...+.+..++.+|++|.|+.+++-+|+||+.|.-+. +.....+.+|+.+|
T Consensus 192 l~~p~G~~~g~~~~~~---~~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~~-----------~~~~~~~~~G~~~m 257 (265)
T PRK04201 192 LAEPLGAVLGYLLLGP---FISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGPH-----------HLPSYGLIAGMAVM 257 (265)
T ss_pred HHHHHHHHHHHHHHcc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----------hHHHHHHHHHHHHH
Confidence 4455566665544321 124567889999999999999999999999884211 24667788899988
Q ss_pred HHHHHH
Q 041596 141 LMVDSF 146 (252)
Q Consensus 141 ~~iE~~ 146 (252)
...+..
T Consensus 258 ~~~~~~ 263 (265)
T PRK04201 258 ALSLVL 263 (265)
T ss_pred HHHHHH
Confidence 887754
No 12
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=93.82 E-value=0.4 Score=42.80 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=45.5
Q ss_pred chhHHHHHHHhhHHHHHHHhhhhcHhhhhhh-cCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 041596 83 KDLFVIVKSFASGVILATGYMHVLPDSFDDL-RSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFA 147 (252)
Q Consensus 83 ~~~ls~~~~FaaGV~LataflHLLPea~e~l-~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~ 147 (252)
+.++.++..|++|.|+...+-.++||+.+.- ++ =+.......+|+.++++.|...
T Consensus 209 ~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~----------~~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 209 PLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGS----------EKLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCc----------hHHHHHHHHHHHHHHHHHHHhh
Confidence 4789999999999999999999999999942 11 1356677889999999999754
No 13
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=91.62 E-value=0.97 Score=41.47 Aligned_cols=83 Identities=10% Similarity=0.143 Sum_probs=51.1
Q ss_pred HHHHHHHHhHHHHHhccc-c-CCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHH
Q 041596 59 ILVTSMIGVCLPLFTCAV-P-ALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLS 136 (252)
Q Consensus 59 il~~sllg~~lPl~~~~~-~-~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~G 136 (252)
--+.+-+|..+-+..... . .......+..+++++++|.|+.+++++++|+-+..-+ +. ....+.-+..+...+|
T Consensus 238 fsl~tPiG~~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~--~~--~~~~~~~~~~~~~~~G 313 (324)
T TIGR00820 238 FAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPK--MQ--SNLRLQIMAYIALLLG 313 (324)
T ss_pred HHHhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cc--chHHHHHHHHHHHHHH
Confidence 334566677776654431 1 1111124678999999999999999999997654211 10 0111223556677889
Q ss_pred HHHHHHHHH
Q 041596 137 AVVTLMVDS 145 (252)
Q Consensus 137 f~l~~~iE~ 145 (252)
+.+|.++-+
T Consensus 314 ~~~Ma~l~~ 322 (324)
T TIGR00820 314 AGLMSLLAK 322 (324)
T ss_pred HHHHHHHHH
Confidence 988887754
No 14
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=91.41 E-value=1.1 Score=41.32 Aligned_cols=91 Identities=11% Similarity=0.182 Sum_probs=61.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHhccc-cCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcc
Q 041596 48 ALKFKIIAVCSILVTSMIGVCLPLFTCAV-PALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEF 126 (252)
Q Consensus 48 ~~~lKi~~i~~il~~sllg~~lPl~~~~~-~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~y 126 (252)
...+.++..+..-+++-+|..+-...... ...........+++++|+|.++.++|++|||.-+..-... . .+.
T Consensus 232 ~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~----~--~~~ 305 (327)
T KOG1558|consen 232 TFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQ----S--LKL 305 (327)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhh----h--HHH
Confidence 45555666666666777787777665542 2333346688999999999999999999999877642210 0 122
Q ss_pred h-HHHHHHHHHHHHHHHHH
Q 041596 127 P-FTTFIAMLSAVVTLMVD 144 (252)
Q Consensus 127 P-~~~~i~~~Gf~l~~~iE 144 (252)
+ ...+..++||-+|..+-
T Consensus 306 ~i~~~i~~~~G~alms~l~ 324 (327)
T KOG1558|consen 306 QILKLIALLLGFALMSLLA 324 (327)
T ss_pred HHHHHHHHHHhHHHHHHHH
Confidence 3 55667778888887764
No 15
>PLN02159 Fe(2+) transport protein
Probab=88.06 E-value=2.5 Score=39.11 Aligned_cols=87 Identities=13% Similarity=0.112 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhHHHHHhccc-cC-CCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHH
Q 041596 55 AVCSILVTSMIGVCLPLFTCAV-PA-LQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFI 132 (252)
Q Consensus 55 ~i~~il~~sllg~~lPl~~~~~-~~-~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i 132 (252)
..++--+.+-+|..+-+..... .. ......+...++++++|.|+.+++++++|+-+..-+ +. .+.... -+..+.
T Consensus 247 ~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~--~~-~~~~~~-~~~~~~ 322 (337)
T PLN02159 247 MAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPK--LQ-GSIKLQ-IKCFFA 322 (337)
T ss_pred HHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cc-ccHHHH-HHHHHH
Confidence 3333344566777777655432 11 111125678999999999999999999997653211 10 010001 144456
Q ss_pred HHHHHHHHHHHHH
Q 041596 133 AMLSAVVTLMVDS 145 (252)
Q Consensus 133 ~~~Gf~l~~~iE~ 145 (252)
..+|+.+|-++-+
T Consensus 323 l~~G~~~Mall~~ 335 (337)
T PLN02159 323 ALLGCGGMSIVAK 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 7888888877654
No 16
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=73.64 E-value=1.2 Score=42.76 Aligned_cols=77 Identities=19% Similarity=0.324 Sum_probs=53.4
Q ss_pred HHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCC-CCcchHHHHHHHHHHHH
Q 041596 61 VTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHP-WKEFPFTTFIAMLSAVV 139 (252)
Q Consensus 61 ~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~-~~~yP~~~~i~~~Gf~l 139 (252)
+++++|..+.++.... ....+-..+-.|++|.||..++..|+||-.|.-.+. .. |..+-.-.+.++.||.+
T Consensus 374 l~a~~G~~ig~~~~~~----~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~----~~~~~~~~lq~~gil~G~~~ 445 (453)
T KOG2693|consen 374 LTAFAGLAIGLVLGAG----DEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSV----KKRKFCFALQIFGILAGFTI 445 (453)
T ss_pred HHHHhhhheeEEecCC----CccchHHHHHHHhcCcEEEEEehhhchhhhhccccc----hhHHHHHHHHHHHHHhhhHH
Confidence 3455666666554432 135566778899999999999999999999976541 11 33334556678889999
Q ss_pred HHHHHH
Q 041596 140 TLMVDS 145 (252)
Q Consensus 140 ~~~iE~ 145 (252)
|+++..
T Consensus 446 ml~ia~ 451 (453)
T KOG2693|consen 446 MLLIAL 451 (453)
T ss_pred Hhhhhc
Confidence 988753
No 17
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=64.32 E-value=7.2 Score=36.63 Aligned_cols=29 Identities=31% Similarity=0.552 Sum_probs=26.2
Q ss_pred CCchhHHHHHHHhhHHHHHHHhhhhcHhh
Q 041596 81 PDKDLFVIVKSFASGVILATGYMHVLPDS 109 (252)
Q Consensus 81 ~~~~~ls~~~~FaaGV~LataflHLLPea 109 (252)
.+++++...+.||+||+|+..|.-++-++
T Consensus 72 ~~~~~l~~~lGfAaGvmLaaSf~S~l~~s 100 (406)
T KOG2474|consen 72 NSRKVLDISLGFAAGVMLAASFWSLLAHS 100 (406)
T ss_pred CchhhhhhhhchhhhHHHHHHHHHhhccc
Confidence 34689999999999999999999999888
No 18
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.17 E-value=14 Score=28.60 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=34.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHH
Q 041596 44 DRAAALKFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVI 97 (252)
Q Consensus 44 ~~~~~~~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~ 97 (252)
.+.+....|+.+=|+ .+.++|..+-|+..++...++...+...+..|++||+
T Consensus 39 ~k~~~~a~klssefI--sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 39 IKGYAQAFKLSSEFI--SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhHHHHHHHH--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 445566777766544 3445555555655555555666778889999999997
No 19
>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]
Probab=35.28 E-value=42 Score=32.35 Aligned_cols=84 Identities=12% Similarity=0.217 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcC-CCCCCCCCCcch-HH
Q 041596 52 KIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRS-PCLPDHPWKEFP-FT 129 (252)
Q Consensus 52 Ki~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~-~~~~~~~~~~yP-~~ 129 (252)
.++.+..+..+..+|..+|.+...- ....+....+..+=++.|+-.--++|=..+.+.- |-...+ | .+
T Consensus 359 ~vG~~~G~vl~~~~~~~~~~~~~~~-----~~l~~~v~~al~~~~~~A~l~G~~iP~ll~kl~~DPAvaS~-----p~iT 428 (451)
T COG2239 359 GVGLLLGLVLAIIIGLRVPAWLYGG-----LLLGLIVALALLLNILFAALVGVLIPILLKKLGLDPAVASG-----PLIT 428 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-----chHHHHHHHHHHHHHHHHHHhhchHHHHHHHcCCCchhhcc-----chHH
Confidence 3444545545555555556544321 2334445556666777888888888888887753 111111 2 23
Q ss_pred HHHHHHHHHHHHHHHH
Q 041596 130 TFIAMLSAVVTLMVDS 145 (252)
Q Consensus 130 ~~i~~~Gf~l~~~iE~ 145 (252)
.+.=..|++..+.+..
T Consensus 429 Tl~D~~g~~iyf~ia~ 444 (451)
T COG2239 429 TLTDITGLLIYFGIAT 444 (451)
T ss_pred hhccchhHhhHHHHHH
Confidence 3333456666665554
No 20
>PF07086 DUF1352: Protein of unknown function (DUF1352); InterPro: IPR009787 This family consists of several hypothetical eukaryotic proteins of around 190 residues in length. The function of this family is unknown.
Probab=31.18 E-value=3.3e+02 Score=23.07 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=15.0
Q ss_pred HHHHhhhhcHhhhhhhcC
Q 041596 98 LATGYMHVLPDSFDDLRS 115 (252)
Q Consensus 98 LataflHLLPea~e~l~~ 115 (252)
+..+.+-.+||..+.+++
T Consensus 115 l~~g~~~~~~~~~~y~~~ 132 (186)
T PF07086_consen 115 LIYGAMYYFPEVQQYYRH 132 (186)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 667788899999998876
No 21
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=30.51 E-value=95 Score=22.57 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=37.3
Q ss_pred HHHHHHHHhHHHHHhcc---------ccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhc
Q 041596 59 ILVTSMIGVCLPLFTCA---------VPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLR 114 (252)
Q Consensus 59 il~~sllg~~lPl~~~~---------~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~ 114 (252)
|++.-++|+++.+...+ .+..+..++.-+.+-...+|++++++-+-.+--..|+..
T Consensus 6 i~~l~~lgG~IA~~GD~iG~kvGKkrlslFgLRPr~Ta~lVti~TG~~Is~~tl~vl~~~s~~~R 70 (79)
T PF11283_consen 6 ILALLLLGGLIAYLGDRIGSKVGKKRLSLFGLRPRYTAILVTILTGVLISALTLGVLFLLSENVR 70 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcCCCccceeehHHHHhHHHHHHHHHHHHHHhHHHH
Confidence 44455667777765322 223445567777888889999999988877766666543
No 22
>PF00822 PMP22_Claudin: PMP-22/EMP/MP20/Claudin family; InterPro: IPR004031 Several vertebrate small integral membrane glycoproteins are evolutionary related [, , ], including eye lens specific membrane protein 20 (MP20 or MP19); epithelial membrane protein-1 (EMP-1), which is also known as tumor-associated membrane protein (TMP) or as squamous cell-specific protein Cl-20; epithelial membrane protein-2 (EMP-2), which is also known as XMP; epithelial membrane protein-3 (EMP-3), also known as YMP; and peripheral myelin protein 22 (PMP-22), which is expressed in many tissues but mainly by Schwann cells as a component of myelin of the peripheral nervous system (PNS). PMP-22 probably plays a role both in myelinization and in cell proliferation. Mutations affecting PMP-22 are associated with hereditary motor and sensory neuropathies such as Charcot-Marie-Tooth disease type 1A (CMT-1A) in human or the trembler phenotype in mice. The proteins of this family are about 160 to 173 amino acid residues in size, and contain four transmembrane segments. PMP-22, EMP-1, -2 and -3 are highly similar, while MP20 is more distantly related. This family also includes the claudins, which are components of tight junctions.; GO: 0016020 membrane
Probab=29.67 E-value=1.6e+02 Score=23.22 Aligned_cols=19 Identities=16% Similarity=0.495 Sum_probs=11.7
Q ss_pred CcchHHHHHHHHHHHHHHH
Q 041596 124 KEFPFTTFIAMLSAVVTLM 142 (252)
Q Consensus 124 ~~yP~~~~i~~~Gf~l~~~ 142 (252)
.+|-++..+.-+++++.++
T Consensus 143 ~~~G~s~~lgW~~~~l~~~ 161 (166)
T PF00822_consen 143 YEFGWSFYLGWVAFILLLL 161 (166)
T ss_pred EEehHHHHHHHHHHHHHHH
Confidence 4555676666666666553
No 23
>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]. This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane
Probab=29.64 E-value=3.7e+02 Score=23.20 Aligned_cols=92 Identities=10% Similarity=0.151 Sum_probs=40.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCC---CCC
Q 041596 46 AAALKFKIIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLP---DHP 122 (252)
Q Consensus 46 ~~~~~lKi~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~---~~~ 122 (252)
....+++...++.+. .+++.+.+.+........+++.-++.-...+.+.++-.++..--.-.+ |..++.... +..
T Consensus 98 h~F~gWh~AvLil~~-~s~lf~~lsi~~~iCa~c~~~~ai~~~v~~~ia~l~S~~g~~iF~~~a-~~~d~r~~~g~~~tY 175 (211)
T PF07062_consen 98 HCFFGWHKAVLILIS-FSMLFALLSICFGICAPCHPSFAIFYTVLVFIAALLSLIGLGIFFFNA-HMVDNRFVQGIVGTY 175 (211)
T ss_pred ceehhHHHHHHHHHH-HHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhheeecccceE
Confidence 346788888775554 444455555544322222222223323333444343333332211111 112221111 111
Q ss_pred CCcchHHHHHHHHHHHH
Q 041596 123 WKEFPFTTFIAMLSAVV 139 (252)
Q Consensus 123 ~~~yP~~~~i~~~Gf~l 139 (252)
..+|-++..+.+.|.++
T Consensus 176 eq~~G~afYl~~~g~l~ 192 (211)
T PF07062_consen 176 EQHYGYAFYLHLAGSLL 192 (211)
T ss_pred EEeeeHHHHHHHHHHHH
Confidence 23566888887777763
No 24
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.66 E-value=3.8e+02 Score=23.08 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=56.6
Q ss_pred hhhhHHHHHHHHHHHHHHHH-hHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhh--hcCCCCCCC--
Q 041596 47 AALKFKIIAVCSILVTSMIG-VCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDD--LRSPCLPDH-- 121 (252)
Q Consensus 47 ~~~~lKi~~i~~il~~sllg-~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~--l~~~~~~~~-- 121 (252)
+....|+.+.++++...++. ...++...-+-+.+.-- .+--...+.+|+.+-++.+ +.|+..++ ..+.|....
T Consensus 73 ps~~~~~a~f~vlla~~Lill~i~~~~l~~~c~~~si~-~~cg~~q~~a~l~milGc~-lyP~GW~s~~vr~~CG~~a~k 150 (207)
T KOG4026|consen 73 PSNEFKLAAFFVLLAFVLILLLIVFLALLGCCRSKSIF-NMCGWMQGIAGLCMILGCA-LYPDGWDSPEVRRMCGAKAGK 150 (207)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhh-hhhHHHHHHHHHHHHHHHH-hcCCccCCHHHHHHhccccCC
Confidence 57788999998888877766 33333221110111111 1222334555655555554 77888754 333443321
Q ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 041596 122 ---PWKEFPFTTFIAMLSAVVTLMVDSFAMSY 150 (252)
Q Consensus 122 ---~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~ 150 (252)
..-..-|++..+++|.+.-+.+-.+.-..
T Consensus 151 y~lG~CsIgWaY~lAIig~~daliL~~lsf~l 182 (207)
T KOG4026|consen 151 YYLGDCSIGWAYYLAIIGILDALILAFLSFVL 182 (207)
T ss_pred ccCccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01122489999999998888877665543
No 25
>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=28.30 E-value=4.5e+02 Score=24.98 Aligned_cols=31 Identities=13% Similarity=0.333 Sum_probs=25.9
Q ss_pred HHHHHHHhhHHHHHHHhhhhcHhhhhhhcCC
Q 041596 86 FVIVKSFASGVILATGYMHVLPDSFDDLRSP 116 (252)
Q Consensus 86 ls~~~~FaaGV~LataflHLLPea~e~l~~~ 116 (252)
-.++.+|..++|+.+.-++++-|+.|.+=++
T Consensus 76 AEilGalvN~ifl~alc~~I~~EA~~R~I~p 106 (404)
T KOG1483|consen 76 AEILGALVNAIFLTALCVSILIEAIERIIEP 106 (404)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3567788889999999999999999987553
No 26
>PF05437 AzlD: Branched-chain amino acid transport protein (AzlD); InterPro: IPR008407 This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD, a member of this group, has been shown by mutational analysis to be involved in branched-chain amino acid transport, and to be involved in conferring resistance to 4-azaleucine []. However, its exact role in these processes is not yet clear []. Based on its hydropathy profile, it has been suggested to be a membrane protein [].
Probab=26.29 E-value=2.6e+02 Score=20.39 Aligned_cols=51 Identities=8% Similarity=0.148 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhc
Q 041596 54 IAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVL 106 (252)
Q Consensus 54 ~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLL 106 (252)
..+....++|.+-=++|+...+ +.+.+++.-..+++...+++-+..+-.++
T Consensus 3 l~i~~~~~~T~~~R~lp~~~~~--~~~~~~~~~~~l~~vp~avl~aLv~~~i~ 53 (99)
T PF05437_consen 3 LVILGMALVTYLTRVLPFLLMR--RRKLPPRVRRFLRYVPPAVLAALVVPSIF 53 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cccCCHHHHHHHHHhHHHHHHHHHHHHHc
Confidence 4456667778888888877554 23557888899999999999999887777
No 27
>COG4317 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.24 E-value=2.1e+02 Score=21.08 Aligned_cols=47 Identities=19% Similarity=0.250 Sum_probs=33.1
Q ss_pred HHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 041596 88 IVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYY 151 (252)
Q Consensus 88 ~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~ 151 (252)
++.+|++|.+.+..+- +-...+ |-+..++++|.+-++.=|++..+..
T Consensus 4 yllslgAGllVGiiya------Ll~vrs-----------PAPP~iAlvGllGilvGeq~~p~~~ 50 (93)
T COG4317 4 YLLSLGAGLLVGIIYA------LLKVRS-----------PAPPAIALVGLLGILVGEQIVPWAK 50 (93)
T ss_pred HHHHHhhhHHHHHHHH------HHhCCC-----------CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888776652 112222 5566778999999999999987643
No 28
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=24.89 E-value=3.4e+02 Score=21.19 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=29.4
Q ss_pred HHHHHHhhHHHHHHHhhhhcHhhhhhh-c----CCC--CCCCCCCcchHHHHHHHHHHHHHHH
Q 041596 87 VIVKSFASGVILATGYMHVLPDSFDDL-R----SPC--LPDHPWKEFPFTTFIAMLSAVVTLM 142 (252)
Q Consensus 87 s~~~~FaaGV~LataflHLLPea~e~l-~----~~~--~~~~~~~~yP~~~~i~~~Gf~l~~~ 142 (252)
..+..+.+|++..++.+ +.+...+.. + ... .+.....+|-++..++.+|+++.++
T Consensus 104 ~~~~~~~ag~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwSf~la~~a~~~~l~ 165 (172)
T PF13903_consen 104 AGILFILAGLCILIALI-VFVVSVNYEIEINFPQWPPDPPSPFSYSYGWSFWLAWVAFILLLL 165 (172)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhcccccCccCeeEEECHHHHHHHHHHHHHHH
Confidence 33445567776665554 444444321 1 110 1112234777888888888877654
No 29
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.88 E-value=17 Score=32.28 Aligned_cols=53 Identities=21% Similarity=0.390 Sum_probs=34.0
Q ss_pred HHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCC--CCCcchHHHH-HHHHHHHHHHHH
Q 041596 89 VKSFASGVILATGYMHVLPDSFDDLRSPCLPDH--PWKEFPFTTF-IAMLSAVVTLMV 143 (252)
Q Consensus 89 ~~~FaaGV~LataflHLLPea~e~l~~~~~~~~--~~~~yP~~~~-i~~~Gf~l~~~i 143 (252)
+.-|+||-||.++++|.+||--. .++|+... ....||.-+. ...+|.++-+.+
T Consensus 242 lmLfSaGtfLYvatvhvlpe~~~--~dh~l~vea~~g~~l~~~E~v~li~G~~iPlIi 297 (303)
T KOG3907|consen 242 LMLFSAGTFLYVATVHVLPELSH--TDHSLSVEATGGAVLPHDELVYLIIGALIPLII 297 (303)
T ss_pred eeeecCCeeEEEEEEEEccccCC--CCcccccccccccccchhHHHHHHHhHHHHHHH
Confidence 34689999999999999999766 22333211 1236676655 445566655544
No 30
>PRK08307 stage III sporulation protein SpoAB; Provisional
Probab=23.27 E-value=1.5e+02 Score=24.55 Aligned_cols=68 Identities=18% Similarity=0.298 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHH
Q 041596 53 IIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFI 132 (252)
Q Consensus 53 i~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i 132 (252)
++++++++.++.+|-...--.++.+ +.-+.....++.+-+=+.-+.. =|||+++..... .+.|+..++
T Consensus 4 iGa~LIi~s~~~~G~~~a~~~~~R~--~~L~~l~~~l~~L~~EI~Y~~t---pL~ea~~~i~~~-------~~~~~~~~f 71 (171)
T PRK08307 4 LGAVLIIAASTWIGFLYAKRYKERP--RQLRELKAALQSLEAEIMYGHT---PLPEALENIAKQ-------SPKPISTLF 71 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCC---cHHHHHHHHHHc-------cchhHHHHH
Confidence 4677778888888887775443311 1113344455555555554433 389999988762 344666554
No 31
>TIGR02833 spore_III_AB stage III sporulation protein AB. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage III sporulation protein AB.
Probab=21.85 E-value=1.6e+02 Score=24.32 Aligned_cols=68 Identities=16% Similarity=0.269 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHhccccCCCCCchhHHHHHHHhhHHHHHHHhhhhcHhhhhhhcCCCCCCCCCCcchHHHHH
Q 041596 53 IIAVCSILVTSMIGVCLPLFTCAVPALQPDKDLFVIVKSFASGVILATGYMHVLPDSFDDLRSPCLPDHPWKEFPFTTFI 132 (252)
Q Consensus 53 i~~i~~il~~sllg~~lPl~~~~~~~~~~~~~~ls~~~~FaaGV~LataflHLLPea~e~l~~~~~~~~~~~~yP~~~~i 132 (252)
++++++++.++.+|-...--.++.+ +.-+.+...++.+-+=+.-+.. =|||+++..... .+.|+..++
T Consensus 3 iGa~LIi~s~~~~G~~~a~~~~~R~--~~L~~l~~~l~~L~~EI~Y~~t---pL~ea~~~i~~~-------~~~~~~~~f 70 (170)
T TIGR02833 3 LGALLIVLSSTWIGFLYANRFKERP--RQLRQLINALQSLEAEIVYGHT---PLPEAFKKIALK-------SPKPVNLLF 70 (170)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCC---cHHHHHHHHHhh-------cchhHHHHH
Confidence 5788888889999988875443311 1113344455555555554433 389999988763 334666554
No 32
>TIGR00400 mgtE Mg2+ transporter (mgtE). This family of prokaryotic proteins models a class of Mg++ transporter first described in Bacillus firmus. May form a homodimer.
Probab=20.89 E-value=2.1e+02 Score=27.28 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=10.5
Q ss_pred HHHHHHHHhHHHHHhccc
Q 041596 59 ILVTSMIGVCLPLFTCAV 76 (252)
Q Consensus 59 il~~sllg~~lPl~~~~~ 76 (252)
+.+++++|.++|++.+|+
T Consensus 398 ~~~~~~~G~~lp~~~~k~ 415 (449)
T TIGR00400 398 LTVAKILGGLLPIVAKLL 415 (449)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 445556666666666554
No 33
>TIGR02896 spore_III_AF stage III sporulation protein AF. This family represents the stage III sporulation protein AF of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). The C-terminal region of this protein is poorly conserved, so only the N-terminal region, which includes two predicted transmembrane domains, is included in the seed alignment.
Probab=20.72 E-value=2e+02 Score=22.02 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=30.6
Q ss_pred HHHHHHhhHHHHHHHhhhhcHhhh-hhhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041596 87 VIVKSFASGVILATGYMHVLPDSF-DDLRSPCLPDHPWKEFPFTTFIAMLSAVVTLMVDSFAMSYYK 152 (252)
Q Consensus 87 s~~~~FaaGV~LataflHLLPea~-e~l~~~~~~~~~~~~yP~~~~i~~~Gf~l~~~iE~~~~~~~~ 152 (252)
..++.....++++|.+-+|+|+.- +.+ .=..+|++++..+=+=+....+
T Consensus 5 ~Wv~~i~~~~il~t~~~~llP~~~~kkY-----------------vr~v~Gl~Li~~il~Pi~~l~~ 54 (106)
T TIGR02896 5 EWVTNIIVLILLATILEMLLPNSSLKKY-----------------VKFVVGLILMVVILNPIIKLLT 54 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhC
Confidence 455677777899999999999753 222 1245666666665544444443
Done!