BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041602
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/141 (89%), Positives = 130/141 (92%), Gaps = 5/141 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRVSERDLEDEFRM+GVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG
Sbjct: 1 MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
Query: 61 KNGWRVELSHNSK-----GGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGS 115
KNGWRVELSHNSK GGG GG GGED+KCYECGEPGHFARECRLRIGSRGLGS
Sbjct: 61 KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFARECRLRIGSRGLGS 120
Query: 116 GRRRSPSPRRRRSPSYGYGRR 136
GRRRSPSP+RRRSPSYGYGRR
Sbjct: 121 GRRRSPSPKRRRSPSYGYGRR 141
>gi|224144714|ref|XP_002325387.1| predicted protein [Populus trichocarpa]
gi|222862262|gb|EEE99768.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/138 (91%), Positives = 128/138 (92%), Gaps = 2/138 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFRM+GVLRSVWVARRPPGYAFVEFDDRRDA+DAIRALDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60
Query: 61 KNGWRVELSHNSK--GGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGRR 118
KNGWRVELSHNSK GG G GRGGGED KCYECGEPGHFARECRLRIGSRGLGS RR
Sbjct: 61 KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFARECRLRIGSRGLGSSRR 120
Query: 119 RSPSPRRRRSPSYGYGRR 136
RSPSPRRR SPSYGYGRR
Sbjct: 121 RSPSPRRRGSPSYGYGRR 138
>gi|356526819|ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 176
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/116 (88%), Positives = 108/116 (93%), Gaps = 2/116 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFR++GVLRSVWVARRPPGYAF+EFDDRRDA+DAI+ALDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELSHNSKGGG G GGED KCYECGEPGHFARECRLRIGSRGLGSG
Sbjct: 61 KNGWRVELSHNSKGGG--RGGRGRGGEDTKCYECGEPGHFARECRLRIGSRGLGSG 114
>gi|363807806|ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
gi|255640857|gb|ACU20711.1| unknown [Glycine max]
Length = 177
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/116 (85%), Positives = 105/116 (90%), Gaps = 2/116 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNL PRV+ERDLEDEFR++GVL SVWVARRPPGYAF+EFDDRRDA+DAI+ALDG
Sbjct: 1 MSRVYVGNLHPRVNERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELSHNSK GG G GGED KCYECGEPGHFARECRLRIGSRGLGSG
Sbjct: 61 KNGWRVELSHNSK--GGGRGGRGRGGEDTKCYECGEPGHFARECRLRIGSRGLGSG 114
>gi|225424701|ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
gi|296086540|emb|CBI32129.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/122 (86%), Positives = 111/122 (90%), Gaps = 6/122 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSER+LEDEFR++GV+RSVWVARRPPGYAFVEF DRRDAVDAIR LDG
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDG 60
Query: 61 KNGWRVELSHNSK------GGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLG 114
K+GWRVELSHNSK GGGG RGRGGGEDLKCYECGEPGHFARECRLRIGSRG+G
Sbjct: 61 KSGWRVELSHNSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFARECRLRIGSRGMG 120
Query: 115 SG 116
SG
Sbjct: 121 SG 122
>gi|115449145|ref|NP_001048352.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|75324004|sp|Q6K4N0.1|RSZ21_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=Os-RSZ21; Short=Os-RSZp21
gi|47497051|dbj|BAD19103.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|47497773|dbj|BAD19873.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113537883|dbj|BAF10266.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|215706489|dbj|BAG93345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706955|dbj|BAG93415.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191722|gb|EEC74149.1| hypothetical protein OsI_09229 [Oryza sativa Indica Group]
gi|222623815|gb|EEE57947.1| hypothetical protein OsJ_08668 [Oryza sativa Japonica Group]
Length = 185
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 113/138 (81%), Gaps = 9/138 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLDPRV+ +LEDEFR+FGVLRSVWVAR+PPG+AF++FDD+RDA DA+R LDG
Sbjct: 1 MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGR--- 117
KNGWRVELS NS RGGR R GG ++KCYECGE GHFARECRLRIG GLGSG+
Sbjct: 61 KNGWRVELSRNSS---SRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKRRS 117
Query: 118 ---RRSPSPRRRRSPSYG 132
RS SP+ R+SP+YG
Sbjct: 118 RSRSRSRSPQYRKSPTYG 135
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/108 (79%), Positives = 97/108 (89%), Gaps = 3/108 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS +K G GR GR R GG D+KCYECGEPGHFARECRLRI
Sbjct: 61 KNGWRVELS--TKAGSGR-GRDRSGGSDMKCYECGEPGHFARECRLRI 105
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/108 (79%), Positives = 97/108 (89%), Gaps = 3/108 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS +K G GR GR R GG D+KCYECGEPGHFARECRLRI
Sbjct: 61 KNGWRVELS--TKAGSGR-GRDRSGGSDMKCYECGEPGHFARECRLRI 105
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R+LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR +DG
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 139
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GRGGR R G + KCYECGE GHFARECRLRI
Sbjct: 140 KNGWRVELSRNAS--SGRGGRDRYGSSESKCYECGETGHFARECRLRI 185
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R+LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR +DG
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 139
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GRGGR R G + KCYECGE GHFARECRLRI
Sbjct: 140 KNGWRVELSRNAS--SGRGGRDRYGSSESKCYECGETGHFARECRLRI 185
>gi|388505416|gb|AFK40774.1| unknown [Lotus japonicus]
Length = 181
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/105 (89%), Positives = 99/105 (94%), Gaps = 1/105 (0%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFR++GVLRSVWVARRPPGYAF+EFDD+RDA+DAI ALDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60
Query: 61 KNGWRVELSHNSK-GGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHNSK GGGGRGG GGEDLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 188
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 119/185 (64%), Gaps = 44/185 (23%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVY+GNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAF+EFDDRRDA+DAI+ALDG
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSK--------GGGGRGGRGRGGGEDLKCYECGEPGHFAREC-------- 104
KNGWRVELSHNSK G G GG G GGG+DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
Query: 105 -----------------------RLRIGSRGLGSGRRRSPSPRRR-----RSPSYGYGRR 136
R RG S RRRS +P +R RSP Y + RR
Sbjct: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR 180
Query: 137 CGSRA 141
A
Sbjct: 181 ASPYA 185
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R+LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR +DG
Sbjct: 1 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GRGGR R G + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNA--SSGRGGRDRYGSSESKCYECGETGHFARECRLRI 106
>gi|195649571|gb|ACG44253.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 255
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS G G D+KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSTKVG----GGRGRDRNGSDMKCYECGEAGHFARECRLRIGSGGLGSG 112
>gi|194688308|gb|ACF78238.1| unknown [Zea mays]
gi|194701410|gb|ACF84789.1| unknown [Zea mays]
gi|219886269|gb|ACL53509.1| unknown [Zea mays]
gi|223943153|gb|ACN25660.1| unknown [Zea mays]
gi|224028603|gb|ACN33377.1| unknown [Zea mays]
gi|238011236|gb|ACR36653.1| unknown [Zea mays]
gi|413937729|gb|AFW72280.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413937730|gb|AFW72281.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413937731|gb|AFW72282.1| splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413937732|gb|AFW72283.1| splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|413937733|gb|AFW72284.1| splicing factor, arginine/serine-rich 7 isoform 5 [Zea mays]
gi|443286693|gb|AGC79938.1| arginine/serine-rich splicing factor RSZ28I [Zea mays]
gi|443286695|gb|AGC79939.1| arginine/serine-rich splicing factor RSZ28II [Zea mays]
gi|443286697|gb|AGC79940.1| arginine/serine-rich splicing factor RSZ28III [Zea mays]
Length = 253
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS G G D+KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSTKVG----GGRGRDRNGSDMKCYECGEAGHFARECRLRIGSGGLGSG 112
>gi|219887691|gb|ACL54220.1| unknown [Zea mays]
gi|413937734|gb|AFW72285.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286701|gb|AGC79942.1| arginine/serine-rich splicing factor RSZ28V [Zea mays]
Length = 231
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS G G D+KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSTKVG----GGRGRDRNGSDMKCYECGEAGHFARECRLRIGSGGLGSG 112
>gi|443286703|gb|AGC79943.1| arginine/serine-rich splicing factor RSZ28VI [Zea mays]
Length = 185
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS G G D+KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSTKVG----GGRGRDRNGSDMKCYECGEAGHFARECRLRIGSGGLGSG 112
>gi|226532353|ref|NP_001140388.1| uncharacterized protein LOC100272442 [Zea mays]
gi|194699276|gb|ACF83722.1| unknown [Zea mays]
gi|413937728|gb|AFW72279.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286699|gb|AGC79941.1| arginine/serine-rich splicing factor RSZ28IV [Zea mays]
Length = 141
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS G G D+KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSTKVG----GGRGRDRNGSDMKCYECGEAGHFARECRLRIGSGGLGSG 112
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 120/152 (78%), Gaps = 19/152 (12%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGL------- 113
KNGWRVELS +S GGGG G GG+D+KCYECGEPGHFARECRLRIG+ GL
Sbjct: 61 KNGWRVELSRSSGGGGGPRG---RGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGRGK 117
Query: 114 ---GSGR-RRSP-----SPRRRRSPSYGYGRR 136
S R RRSP SPR RRSPSYGYG R
Sbjct: 118 SPRASPRYRRSPSYGGRSPRYRRSPSYGYGGR 149
>gi|357150077|ref|XP_003575333.1| PREDICTED: uncharacterized protein LOC100846226 [Brachypodium
distachyon]
Length = 231
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 92/107 (85%), Gaps = 3/107 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPR + R++EDEFR+FG+LRSVWVAR+PPG+AF++FD+ RDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRATAREIEDEFRVFGILRSVWVARKPPGFAFIDFDESRDAKDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRG-GRGRGGGEDLKCYECGEPGHFARECRL 106
KNGWRVELS +K G GRG R R GG D+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELS--TKSGSGRGRERERPGGSDMKCYECGESGHFARECRL 105
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 119/152 (78%), Gaps = 7/152 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI-GSRGLGSGRRR 119
KNGWRVELS +S GGGG G GG+D+KCYECGEPGHFARECRLRI GR +
Sbjct: 61 KNGWRVELSRSSGGGGGPRG---RGGDDMKCYECGEPGHFARECRLRIGAGGLGTGGRGK 117
Query: 120 SP--SPRRRRSPSYGYGR-RCGSRAMSSSAMA 148
SP SPR RRSPSYG R + R S S +A
Sbjct: 118 SPRASPRYRRSPSYGARRSKSSPRLRSVSPVA 149
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 116/142 (81%), Gaps = 7/142 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI-GSRGLGSGRRR 119
KNGWRVELS +S GGGG G GG+D+KCYECGEPGHFARECRLRI GR +
Sbjct: 61 KNGWRVELSRSSGGGGGPRG---RGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGRGK 117
Query: 120 SP--SPRRRRSPSYGYGRRCGS 139
SP SPR RRSPSYG GRR S
Sbjct: 118 SPRASPRYRRSPSYG-GRRSKS 138
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/114 (81%), Positives = 98/114 (85%), Gaps = 6/114 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFR FGV+RSVWVARRPPGYAF++FDD+RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
Query: 61 KNGWRVELSHN------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELSHN GGG GGRGR GG DLKCYECGEPGHFARECRLR+
Sbjct: 61 KNGWRVELSHNSRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRV 114
>gi|448878399|gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens subsp. patens]
Length = 137
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 112/135 (82%), Gaps = 6/135 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI-GSRGLGSGRRR 119
KNGWRVELS +S GGGG G GG+D+KCYECGEPGHFARECRLRI GR +
Sbjct: 61 KNGWRVELSRSSGGGGGPRG---RGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGRGK 117
Query: 120 SP--SPRRRRSPSYG 132
SP SPR RRSPSYG
Sbjct: 118 SPRASPRYRRSPSYG 132
>gi|226502815|ref|NP_001147002.1| LOC100280612 [Zea mays]
gi|195606380|gb|ACG25020.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195616164|gb|ACG29912.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413924261|gb|AFW64193.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413924262|gb|AFW64194.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
Length = 163
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/108 (74%), Positives = 92/108 (85%), Gaps = 3/108 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLD RV+ +LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGW+VELS ++ GRG R R GG + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWKVELSRSTN---GRGSRDRHGGSESKCYECGETGHFARECRLRI 105
>gi|359476412|ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Vitis vinifera]
gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/109 (84%), Positives = 98/109 (89%), Gaps = 3/109 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR+FGV+RSVWVARRPPGYAF++FDDRRDA DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHN---SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
KNGWRVELSHN GGG GGRGR GG DLKCYECGEPGHFARECRL
Sbjct: 61 KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 109
>gi|68035449|gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum]
Length = 167
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 102/116 (87%), Gaps = 2/116 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVG+LDP V+ R+LEDEFR+FGVLRSVWVAR+PPG+AFV+FDDRRDA DAI+ LDG
Sbjct: 1 MARVYVGSLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS N+ GRGGR R GG ++KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSRNAS--SGRGGRDRSGGSEMKCYECGESGHFARECRLRIGSGGLGSG 114
>gi|326496394|dbj|BAJ94659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517812|dbj|BAK03824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 102/116 (87%), Gaps = 2/116 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVG+LDP V+ R+LEDEFR+FGVLRSVWVAR+PPG+AFV+FDDRRDA DAI+ LDG
Sbjct: 1 MARVYVGSLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS N+ GRGGR R GG ++KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSRNAS--SGRGGRDRSGGSEMKCYECGESGHFARECRLRIGSGGLGSG 114
>gi|242066788|ref|XP_002454683.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|241934514|gb|EES07659.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|448878294|gb|AGE46110.1| arginine/serine-rich splicing factor RSZ19 transcript II [Sorghum
bicolor]
Length = 163
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 100/116 (86%), Gaps = 3/116 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLD RV+ +LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS NS GRGGR R GG + KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSRNSS---GRGGRDRYGGSESKCYECGETGHFARECRLRIGSGGLGSG 113
>gi|356552596|ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 178
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 96/104 (92%), Gaps = 1/104 (0%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLD RV+ERDLEDEFR+FGV+RSVWVARRPPGYAF++FDDRRDA DAIR LDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHNS+GGGG G GR GG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSRGGGG-GRGGRSGGSDLKCYECGEPGHFAREC 103
>gi|212722094|ref|NP_001132794.1| uncharacterized protein LOC100194283 [Zea mays]
gi|194695412|gb|ACF81790.1| unknown [Zea mays]
gi|224035575|gb|ACN36863.1| unknown [Zea mays]
gi|413939271|gb|AFW73822.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939272|gb|AFW73823.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939273|gb|AFW73824.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|448878150|gb|AGE46038.1| arginine/serine-rich splicing factor RSZ20 transcript I [Zea mays]
gi|448878152|gb|AGE46039.1| arginine/serine-rich splicing factor RSZ20 transcript II [Zea mays]
gi|448878154|gb|AGE46040.1| arginine/serine-rich splicing factor RSZ20 transcript III [Zea
mays]
gi|448878156|gb|AGE46041.1| arginine/serine-rich splicing factor RSZ20 transcript IV [Zea mays]
Length = 173
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 100/116 (86%), Gaps = 3/116 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLD RV+ +LEDEFR+FGVLRSVW+AR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDSRVTSGELEDEFRVFGVLRSVWIARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS NS GRGGR R GG + KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSRNSS---GRGGRDRYGGSESKCYECGETGHFARECRLRIGSGGLGSG 113
>gi|359807263|ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
gi|255625755|gb|ACU13222.1| unknown [Glycine max]
gi|255635722|gb|ACU18210.1| unknown [Glycine max]
Length = 178
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 96/104 (92%), Gaps = 1/104 (0%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLD RV+ERDLEDEFR+FGV+RSVWVARRPPGYAF++FDDRRDA DAIR LDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHNS+GGGG G GR GG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSRGGGG-GRGGRSGGSDLKCYECGEPGHFAREC 103
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/133 (72%), Positives = 110/133 (82%), Gaps = 6/133 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI-GSRGLGSGRRR 119
KNGWRVELS +S GGGG G GG+D+KCYECGEPGHFARECRLRI GR +
Sbjct: 61 KNGWRVELSRSSGGGGGPRG---RGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGRGK 117
Query: 120 SP--SPRRRRSPS 130
SP SPR RRSPS
Sbjct: 118 SPRASPRYRRSPS 130
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 192
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSER+LEDEFR+FGV+RSVWVARRPPGYAF++FDD RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
Query: 61 KNGWRVELSHN---SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
KNGWRVELSHN GG G GGRGR GG DLKCYECGEPGHFARECRL
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRL 109
>gi|357466537|ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
gi|355492601|gb|AES73804.1| Splicing factor arginine/serine-rich [Medicago truncatula]
Length = 199
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/115 (74%), Positives = 95/115 (82%), Gaps = 11/115 (9%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVY+GNLD R+SERDLED+F +FGV+RSVWVARRPPGYAF++FDDRRDA+DAIR LDG
Sbjct: 1 MTRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELDG 60
Query: 61 KNGWRVELSHNSKG-----------GGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHNSK GGG GR GGG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKTGGGGGGRGGGGGGGGRGRSGGGGSDLKCYECGEPGHFAREC 115
>gi|357436747|ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula]
Length = 190
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 94/113 (83%), Gaps = 8/113 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLD RVSERDLEDEFR+FGV+RSVWVARRPPGYAF++FDDRRDA DAIR LDG
Sbjct: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHN--------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
KNGWRVELSHN GGG G G GGG DLKCYECGEPGHFARECR
Sbjct: 61 KNGWRVELSHNSRSGGGGGGGGGGRGRGGGGGGGSDLKCYECGEPGHFARECR 113
>gi|297850860|ref|XP_002893311.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
gi|297339153|gb|EFH69570.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
Length = 162
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 93/104 (89%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEFR+FGVLR+VWVARRPPGYAF+EFDD RDA+DAIRALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFRIFGVLRNVWVARRPPGYAFLEFDDERDALDAIRALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|15236000|ref|NP_194886.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|145334187|ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|75318746|sp|O81126.1|RZP22_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22; AltName:
Full=RS-containing zinc finger protein 22;
Short=At-RSZ22; Short=At-RSZp22
gi|3281869|emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|3435094|gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana]
gi|7270061|emb|CAB79876.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|17529204|gb|AAL38828.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21436285|gb|AAM51281.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21554419|gb|AAM63524.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|332660531|gb|AEE85931.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|332660532|gb|AEE85932.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
Length = 200
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 107/142 (75%), Gaps = 10/142 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAIRALDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60
Query: 61 KNGWRVELSHN----------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGS 110
KNGWRVE SHN GGG GGRG GG DLKCYECGE GHFARECR R G+
Sbjct: 61 KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120
Query: 111 RGLGSGRRRSPSPRRRRSPSYG 132
S R PR RRSPSYG
Sbjct: 121 GRRRSKSRSRTPPRYRRSPSYG 142
>gi|448878292|gb|AGE46109.1| arginine/serine-rich splicing factor RSZ19 transcript I [Sorghum
bicolor]
Length = 163
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 99/116 (85%), Gaps = 3/116 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+ VYVGNLD RV+ +LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MACVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
KNGWRVELS NS GRGGR R GG + KCYECGE GHFARECRLRIGS GLGSG
Sbjct: 61 KNGWRVELSRNSS---GRGGRDRYGGSESKCYECGETGHFARECRLRIGSGGLGSG 113
>gi|332038856|gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
Length = 181
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/106 (83%), Positives = 94/106 (88%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLD RV+ERDLEDEFR+FGV+RSVWVARRPPGYAF++FDD RDA DAIR LDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDSRDARDAIRELDG 60
Query: 61 KNGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHN GGG GGRGR GG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
>gi|448878276|gb|AGE46101.1| arginine/serine-rich splicing factor RSZ28 transcript I [Sorghum
bicolor]
gi|448878278|gb|AGE46102.1| arginine/serine-rich splicing factor RSZ28 transcript II [Sorghum
bicolor]
gi|448878280|gb|AGE46103.1| arginine/serine-rich splicing factor RSZ28 transcript III [Sorghum
bicolor]
gi|448878282|gb|AGE46104.1| arginine/serine-rich splicing factor RSZ28 transcript IV [Sorghum
bicolor]
Length = 246
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 90/108 (83%), Gaps = 4/108 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFR FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRTFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGW+VELS + GG G G D+KCYECGE GHFARECRLRI
Sbjct: 61 KNGWKVELSTKAGGGRG----RDRNGSDMKCYECGESGHFARECRLRI 104
>gi|2582643|emb|CAA05351.1| RSZp21 protein [Arabidopsis thaliana]
Length = 184
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 91/104 (87%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDA+DAI ALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|186478807|ref|NP_001117342.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192321|gb|AEE30442.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 164
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 91/104 (87%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDA+DAI ALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|2582645|emb|CAA05352.1| RSZp22 protein [Arabidopsis thaliana]
Length = 200
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 105/142 (73%), Gaps = 10/142 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAIRALDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60
Query: 61 KNGWRVELSHN----------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGS 110
KNGWRV SHN GGG GRG GG DLKCYECGE GHFARECR R G+
Sbjct: 61 KNGWRVAQSHNRGERGGGGRGGDRGGGGAGRGGRGGSDLKCYECGETGHFARECRNRGGT 120
Query: 111 RGLGSGRRRSPSPRRRRSPSYG 132
S R PR RRSPSYG
Sbjct: 121 GRRRSKSRSRTPPRYRRSPSYG 142
>gi|224143401|ref|XP_002324943.1| predicted protein [Populus trichocarpa]
gi|222866377|gb|EEF03508.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/118 (77%), Positives = 97/118 (82%), Gaps = 10/118 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD- 59
MSRVYVGNLDPRVSER+LEDEFR FGV+RSVWVARRPPGYAF++FDD+RDA DAI LD
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDA 60
Query: 60 GKNGWRVELSHN---------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
GKNGWRVELSHN GGG GGRGR GG DLKCYECGE GHFARECRLR+
Sbjct: 61 GKNGWRVELSHNSRGGGGGGGGGGGGRGGGRGRSGGSDLKCYECGEAGHFARECRLRV 118
>gi|18395314|ref|NP_564208.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|42571621|ref|NP_973901.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|75318747|sp|O81127.1|RZP21_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=At-RSZ21; Short=At-RSZp21
gi|3435096|gb|AAD12770.1| SRZ21 [Arabidopsis thaliana]
gi|222424570|dbj|BAH20240.1| AT1G23860 [Arabidopsis thaliana]
gi|332192319|gb|AEE30440.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192320|gb|AEE30441.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 187
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 91/104 (87%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDA+DAI ALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|334182802|ref|NP_001185074.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192322|gb|AEE30443.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 183
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 91/104 (87%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDA+DAI ALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|9369411|gb|AAF87159.1|AC002423_24 T23E23.2 [Arabidopsis thaliana]
Length = 183
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 91/104 (87%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDA+DAI ALD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSH KGG G GG RGG ED KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 93/108 (86%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIR LDG
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ G GGR R GG + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNASSGR--GGRDRYGGSESKCYECGETGHFARECRLRI 106
>gi|357124980|ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 185
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/108 (74%), Positives = 92/108 (85%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDP V+ R+LEDEFR+FGVLRSVWVAR+PPG+AF++FDDRRDA DAIR +DG
Sbjct: 1 MARVYVGNLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ G G R GG ++KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNASSGRGGRDRS--GGSEMKCYECGESGHFARECRLRI 106
>gi|195626508|gb|ACG35084.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 184
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+Y+GNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIR LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GG G R G + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNASGGRGGRDRHGGS--ESKCYECGETGHFARECRLRI 106
>gi|226497758|ref|NP_001149338.1| LOC100282961 [Zea mays]
gi|195607586|gb|ACG25623.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195611760|gb|ACG27710.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223942181|gb|ACN25174.1| unknown [Zea mays]
gi|223946575|gb|ACN27371.1| unknown [Zea mays]
gi|413952876|gb|AFW85525.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413952877|gb|AFW85526.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413952878|gb|AFW85527.1| Splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413952879|gb|AFW85528.1| Splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|448878146|gb|AGE46036.1| arginine/serine-rich splicing factor RSZ21 transcript I [Zea mays]
gi|448878148|gb|AGE46037.1| arginine/serine-rich splicing factor RSZ21 transcript II [Zea mays]
Length = 184
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+Y+GNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIR LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GG G R G + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNASGGRGGRDRHGGS--ESKCYECGETGHFARECRLRI 106
>gi|195635411|gb|ACG37174.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413922982|gb|AFW62914.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 277
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 87/106 (82%), Gaps = 4/106 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RV+VGNLDPRV+ R++EDEFR FGVL+SVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
KNGWRVELS GG G G D+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELSTKDGGGRG----RDRNGSDMKCYECGEVGHFARECRL 102
>gi|413952875|gb|AFW85524.1| hypothetical protein ZEAMMB73_327204 [Zea mays]
Length = 138
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+Y+GNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIR LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELS N+ GG G R G + KCYECGE GHFARECRLRI
Sbjct: 61 KNGWRVELSRNASGGRGGRDRHGGS--ESKCYECGETGHFARECRLRI 106
>gi|449434905|ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor RSZ21-like [Cucumis sativus]
Length = 158
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 82/104 (78%), Gaps = 22/104 (21%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVY+GNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAF+EFDDRRDA+DAI+ALDG
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVELSHNSKGG GHFAREC
Sbjct: 61 KNGWRVELSHNSKGG----------------------GHFAREC 82
>gi|297802872|ref|XP_002869320.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
gi|297315156|gb|EFH45579.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 93/117 (79%), Gaps = 7/117 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAIR +DG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRTFGVIRSVWVARRPPGYAFLDFEDPRDARDAIRDVDG 60
Query: 61 KNGWRVELSHN-------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGS 110
KNGWRVE SHN +GG GG G G DLKCYECGE GHFARECR R G+
Sbjct: 61 KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGASDLKCYECGETGHFARECRNRGGT 117
>gi|226497532|ref|NP_001141411.1| uncharacterized protein LOC100273521 [Zea mays]
gi|194704502|gb|ACF86335.1| unknown [Zea mays]
Length = 222
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 87/106 (82%), Gaps = 4/106 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RV+VGNLDPRV+ R++EDEFR FGVL+SVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
KNGWRVELS GG G G D+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELSTKDGGGRG----RDRNGSDMKCYECGEVGHFARECRL 102
>gi|326491985|dbj|BAJ98217.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 97/121 (80%), Gaps = 8/121 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLD RV+ +LEDEFR+FGVLRSVWVAR+PPG+AF++FDD+RDA DA+R LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHN--------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRG 112
KNGWRVELS N GGGG GG GG D+KCYECGE GHFARECRLRIG+ G
Sbjct: 61 KNGWRVELSRNDRGDRGGRGGGGGGGGGGRDRGGSDMKCYECGESGHFARECRLRIGAGG 120
Query: 113 L 113
L
Sbjct: 121 L 121
>gi|297821775|ref|XP_002878770.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
gi|297324609|gb|EFH55029.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 107/146 (73%), Gaps = 11/146 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR++GV+RSVWVARRPPGYAF++F+D RDA DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFLDFEDSRDARDAIRELDG 60
Query: 61 KNGWRVELSHN----------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGS 110
KNGWRVE SHN G GG G GG DLKCYECGE GHFARECR R GS
Sbjct: 61 KNGWRVEQSHNRGGGGGRGGGGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS 120
Query: 111 RGLGSGRRRSPSPRRRRSPSYGYGRR 136
S R PR R+SP+YG GRR
Sbjct: 121 GRRRSRSRSRSPPRYRKSPTYG-GRR 145
>gi|68035360|gb|AAY84871.1| pre-mRNA processing factor [Triticum aestivum]
Length = 194
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%), Gaps = 8/121 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLD RV+ +LEDEFR+FG+LRSVWVAR+PPG+AF++FDD+RDA DA+R LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGILRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHN--------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRG 112
KNGWRVELS N GGGG GG GG D+KCYECGE GHFARECRLRIG+ G
Sbjct: 61 KNGWRVELSRNDRGDRGGRGGGGGGGGGGRGRGGSDMKCYECGESGHFARECRLRIGAGG 120
Query: 113 L 113
L
Sbjct: 121 L 121
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/106 (74%), Positives = 92/106 (86%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR++GVLRSVWVAR+PPG+AF+EF+DRRDA DA+RAL+G
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVLRSVWVARKPPGFAFIEFEDRRDAGDAVRALNG 60
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
KN WRVELS NS GGG G GG+D+ CY+CGE GHFAREC L
Sbjct: 61 KNDWRVELSRNSGGGG--RGGRGRGGDDMSCYKCGESGHFARECNL 104
>gi|357137369|ref|XP_003570273.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 189
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/118 (70%), Positives = 96/118 (81%), Gaps = 5/118 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLD RV+ +LEDEFR+FG LRSVWVAR+PPG+AF++FDD+RDA DA+R LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGALRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHNSK-----GGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGL 113
KNGWRVELS NS GG GGR R GG + KCYECGE GHFARECRLRIG+ GL
Sbjct: 61 KNGWRVELSRNSSGRGGGRDGGGGGRDRHGGSESKCYECGESGHFARECRLRIGAGGL 118
>gi|15224171|ref|NP_180035.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75337303|sp|Q9SJA6.1|RZ22A_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22A; AltName:
Full=RS-containing zinc finger protein 22A;
Short=At-RSZ22a; Short=At-RSZp22a
gi|4572679|gb|AAD23894.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|26450830|dbj|BAC42523.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|28950713|gb|AAO63280.1| At2g24590 [Arabidopsis thaliana]
gi|330252501|gb|AEC07595.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 196
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/111 (72%), Positives = 88/111 (79%), Gaps = 7/111 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAIR +DG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60
Query: 61 KNGWRVELSHN-------SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
KNGWRVE SHN G GG G GG DLKCYECGE GHFAREC
Sbjct: 61 KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFAREC 111
>gi|255548616|ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223545308|gb|EEF46813.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 179
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/109 (84%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRV+ERDLEDEFR FGV+RSVWVARRPPGYAF++FDD+RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDG 60
Query: 61 KNGWRVELSHN-SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVELSHN GGG GGRGR GG DLKCYECGEPGHFARECRLR+
Sbjct: 61 KNGWRVELSHNSRGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRV 109
>gi|302780048|ref|XP_002971799.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
gi|300160931|gb|EFJ27548.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
Length = 229
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 87/114 (76%), Gaps = 6/114 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPR +ER+LEDEFR FGVLRSVWVAR+PPG+AF+EFDD RDA DAI+ ++G
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMNG 60
Query: 61 KNGWRVEL------SHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVEL G GGG++LKCYECGE GHFAREC LR+
Sbjct: 61 KNGWRVELSRSSNGGRGGGRDPGAREGRGGGGDELKCYECGEAGHFARECVLRV 114
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
Length = 181
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 87/114 (76%), Gaps = 6/114 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPR +ER+LEDEFR FGVLRSVWVAR+PPG+AF+EFDD RDA DAI+ ++G
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMNG 60
Query: 61 KNGWRVEL------SHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
KNGWRVEL G GGG++LKCYECGE GHFAREC LR+
Sbjct: 61 KNGWRVELSRSSNGGRGGGRDPGAREGRGGGGDELKCYECGEAGHFARECVLRV 114
>gi|346472149|gb|AEO35919.1| hypothetical protein [Amblyomma maculatum]
Length = 165
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
Query: 15 ERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSKG 74
ERDLEDEFR++GVLRSVWVARRPPGYAFVEFDDRRDA+DAIRALDGKNGWRVE+SH SK
Sbjct: 11 ERDLEDEFRVYGVLRSVWVARRPPGYAFVEFDDRRDALDAIRALDGKNGWRVEMSHQSKD 70
Query: 75 --GGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
GG GG GGED+KCY CGEPGHFAREC
Sbjct: 71 GSGGRGGGGRSRGGEDMKCYGCGEPGHFAREC 102
>gi|147821435|emb|CAN74578.1| hypothetical protein VITISV_009111 [Vitis vinifera]
Length = 318
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/95 (83%), Positives = 81/95 (85%), Gaps = 6/95 (6%)
Query: 28 LRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSKGGGGRGGRGRGGG- 86
L SVWVARRPPGYAFVEF DRRDAVDAIR LDGK+GWRVELSHNSKGGGG GG G G
Sbjct: 143 LASVWVARRPPGYAFVEFADRRDAVDAIRGLDGKSGWRVELSHNSKGGGGGGGGGGGRDR 202
Query: 87 -----EDLKCYECGEPGHFARECRLRIGSRGLGSG 116
EDLKCYECGEPGHFARECRLRIGSRG+GSG
Sbjct: 203 GRGGGEDLKCYECGEPGHFARECRLRIGSRGMGSG 237
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 29/29 (100%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLR 29
MSRVYVGNLDPRVSER+LEDEFR++GV+R
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVYGVIR 29
>gi|118489183|gb|ABK96398.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/72 (88%), Positives = 68/72 (94%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFR FGV+RSVWVARRPPGYAF++FDD+RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
Query: 61 KNGWRVELSHNS 72
KNGWRVELSHNS
Sbjct: 61 KNGWRVELSHNS 72
>gi|448878286|gb|AGE46106.1| arginine/serine-rich splicing factor RSZ21 transcript II [Sorghum
bicolor]
Length = 79
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 69/77 (89%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+R+YVGNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIR LDG
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSKGGGG 77
KNGWRVELS N+ G G
Sbjct: 61 KNGWRVELSRNASSGRG 77
>gi|413924259|gb|AFW64191.1| hypothetical protein ZEAMMB73_035767, partial [Zea mays]
Length = 191
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 3/80 (3%)
Query: 29 RSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSKGGGGRGGRGRGGGED 88
RSVWVAR+PPG+AF++FDDRRDA DAIR LDGKNGW+VELS ++ G RG R R GG +
Sbjct: 57 RSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG---RGSRDRHGGSE 113
Query: 89 LKCYECGEPGHFARECRLRI 108
KCYECGE GHFARECRLRI
Sbjct: 114 SKCYECGETGHFARECRLRI 133
>gi|413924263|gb|AFW64195.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 178
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 3/79 (3%)
Query: 30 SVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSKGGGGRGGRGRGGGEDL 89
SVWVAR+PPG+AF++FDDRRDA DAIR LDGKNGW+VELS ++ G RG R R GG +
Sbjct: 45 SVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG---RGSRDRHGGSES 101
Query: 90 KCYECGEPGHFARECRLRI 108
KCYECGE GHFARECRLRI
Sbjct: 102 KCYECGETGHFARECRLRI 120
>gi|413924264|gb|AFW64196.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 136
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 3/81 (3%)
Query: 28 LRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSKGGGGRGGRGRGGGE 87
+ SVWVAR+PPG+AF++FDDRRDA DAIR LDGKNGW+VELS ++ G RG R R GG
Sbjct: 1 MESVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG---RGSRDRHGGS 57
Query: 88 DLKCYECGEPGHFARECRLRI 108
+ KCYECGE GHFARECRLRI
Sbjct: 58 ESKCYECGETGHFARECRLRI 78
>gi|218191146|gb|EEC73573.1| hypothetical protein OsI_08026 [Oryza sativa Indica Group]
Length = 235
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 83/140 (59%), Gaps = 35/140 (25%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-----------------------RRP 37
M+RVYVGNLDPRV+ R++EDEFR+FGVLRS ++A
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSFFIADFCHNIKDDFVSTTMEEIFRLLLNTK 60
Query: 38 PGYAFVE---------FDDRRDAVDAIRALDGKNGWRVELSHNSKGGGGRGGRGRGGGED 88
Y +E A DAIR LDGKNGWRVELS +K G GRG R R GG D
Sbjct: 61 NVYGLLENHQVLPLLTLMTAGHAEDAIRDLDGKNGWRVELS--TKAGSGRG-RDRSGGSD 117
Query: 89 LKCYECGEPGHFARECRLRI 108
+KCYECGEPGHFARECRLRI
Sbjct: 118 MKCYECGEPGHFARECRLRI 137
>gi|302845634|ref|XP_002954355.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
gi|300260285|gb|EFJ44505.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
Length = 287
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 77/108 (71%), Gaps = 4/108 (3%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SR+YVGNL ++ERD+ DEF FG +R++WVAR+PPG+AF+E +D RDA DA+R LDG
Sbjct: 3 SRIYVGNLPADIAERDVRDEFERFGRVRTIWVARKPPGFAFLEMEDDRDASDAVRKLDGF 62
Query: 62 NGWRVELSHNSK----GGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
GWRVE S + GG GG G G +L+CYECGE GH AR+CR
Sbjct: 63 QGWRVEFSRRADRGPPPRGGMGGMGGPMGRELRCYECGEIGHIARDCR 110
>gi|413937735|gb|AFW72286.1| hypothetical protein ZEAMMB73_339392, partial [Zea mays]
Length = 119
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 57/60 (95%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNLDPRV+ R++EDEFRMFGVLRSVWVAR+PPG+AF++FDDRRDA DAIR LDG
Sbjct: 59 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 118
>gi|224121292|ref|XP_002330791.1| predicted protein [Populus trichocarpa]
gi|222872593|gb|EEF09724.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 56/60 (93%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPRVSERDLEDEFR FGV+RSVWVARRPPGYAF++FDD+RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
>gi|159477341|ref|XP_001696769.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158275098|gb|EDP00877.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 200
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 12/116 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SR+Y+GNL ++ERD+ DEF FG +R++WVAR+PPG+AF+E +D RDA DA+R LDG
Sbjct: 3 SRIYIGNLPADIAERDVRDEFERFGRVRTIWVARKPPGFAFMEMEDDRDAADAVRKLDGF 62
Query: 62 NGWRVELSHNSK------------GGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
GWRVE S + G GG GG G GG +++CYECGE GH AR+CR
Sbjct: 63 QGWRVEFSRRADRGPPARGGGGGGGFGGGGGPGGPGGREMRCYECGEIGHIARDCR 118
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 76/112 (67%), Gaps = 11/112 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LED FR +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 9 KVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 68
Query: 63 ----GWRVELSHNSKGGGGR------GGRGRGGGEDLKCYECGEPGHFAREC 104
RVE+S N K G GR RGR D +CYECG+ GH+AR+C
Sbjct: 69 ICGRRARVEMS-NGKSGSGRYRGPPPRSRGRPFHPDDRCYECGDRGHYARDC 119
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 76/112 (67%), Gaps = 11/112 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LED FR +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 9 KVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 68
Query: 63 ----GWRVELSHNSKGGGGR------GGRGRGGGEDLKCYECGEPGHFAREC 104
RVE+S N K G GR RGR D +CYECG+ GH+AR+C
Sbjct: 69 ICGRRARVEMS-NGKSGSGRYRGPPPRSRGRPFHPDDRCYECGDRGHYARDC 119
>gi|448878403|gb|AGE46164.1| arginine/serine-rich splicing factor RSZ23 transcript IV
[Physcomitrella patens subsp. patens]
Length = 95
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 57/60 (95%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVGNLDPR +ER+LEDEFR++GVLRSVWV R+PPG+AF+EF+DRRDA DAIRAL+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LED F +G L++VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 12 KVYVGDLGSSASKQELEDAFSYYGSLQNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRT 71
Query: 63 ----GWRVELSHNSK---GGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS+ K G R G GR + KCYECGE GH+AR+C
Sbjct: 72 LCGRRVRVELSNGKKLRDRGSFRRGSGRPFHPEDKCYECGERGHYARDC 120
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 10/108 (9%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+GN+ S+R++E EF FG LR VWVAR PPG+AF F+DRRDA DA+R LDG
Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDG 60
Query: 61 K----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVEL+ G GR R + KCYECG GHFAR+C
Sbjct: 61 RYICGQRARVELAK-----GPSRGRPRQASNE-KCYECGRVGHFARDC 102
>gi|448878290|gb|AGE46108.1| arginine/serine-rich splicing factor RSZ21 transcript IV [Sorghum
bicolor]
Length = 99
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 55/58 (94%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRAL 58
M+R+YVGNLDPRV+ R+LEDEFR FGVLRSVWVAR+PPG+AF++FDD+RDA DAIRAL
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRAL 58
>gi|384245922|gb|EIE19414.1| hypothetical protein COCSUDRAFT_58700 [Coccomyxa subellipsoidea
C-169]
Length = 163
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 82/157 (52%), Gaps = 23/157 (14%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SR+YVGNL +ERDLE+EF FG LRSVWVAR+PPG+AFVE++D RDA DA+R LDG
Sbjct: 3 SRIYVGNLPSSTAERDLEEEFIRFGTLRSVWVARKPPGFAFVEYEDPRDADDAVRKLDGF 62
Query: 62 NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPG-HFARE----------------- 103
GWRVE S N R G + + P + +R
Sbjct: 63 KGWRVEHSKNRGPRWQDAPRDSYRGRERRYTPSTTPALNLSRSGYPVFRAPLPPPSRRRS 122
Query: 104 ---CRLRIGSRGLGSGRRRSPS--PRRRRSPSYGYGR 135
R R S RRRSPS P RRRSPSY R
Sbjct: 123 PSVDRYRRRSPSYERIRRRSPSYEPVRRRSPSYDRDR 159
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LED F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 9 KVYVGDLGSNASKQELEDAFSYYGSLRNVWVARHPPGFAFVEFEDPRDAEDAVRGLDGRT 68
Query: 63 ----GWRVELSHNSK---GGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS+ + G R G R + +CYECGE GH+AR+C
Sbjct: 69 ICGRRARVELSNGKRLRDRGSMRRGAVRSYHPEDRCYECGERGHYARDC 117
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L S++ LED F +G L +VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGDLGSSASKQQLEDAFSYYGPLHNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRI 70
Query: 62 ---NGWRVELSHNSK---GGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS+ K G R G GR + KCYECGE GH+AR+C
Sbjct: 71 VCGRRIRVELSNGKKLRDRGFPRRGVGRPFHPEDKCYECGERGHYARDC 119
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L S +LE EF FG +R VWVAR PPG+ F+ FDD RDA DAIR +DG
Sbjct: 1 MSRIFIGGLPDDASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDG 60
Query: 61 KN--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLR 107
+ G RV + G R R ++ KCY CG+ GH +R+CR R
Sbjct: 61 RRVCGMRVRVE--KARGPNSNNRNRSSAQNEKCYNCGKIGHLSRDCRSR 107
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L S +LE EF FG +R VWVAR PPG+ F+ FDD RDA DAIR +DG
Sbjct: 1 MSRIFIGGLPDDASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDG 60
Query: 61 KN--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLR 107
+ G RV + G R R ++ KCY CG+ GH +R+CR R
Sbjct: 61 RRVCGMRVRVE--KARGPNSNNRNRSSAQNEKCYNCGKIGHLSRDCRSR 107
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 10/112 (8%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S++DLED F +G L++VWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 12 KVYVGDLGSSASKQDLEDAFGYYGPLKNVWVARHPPGFAFVEFEDPRDADDAVRGLDGRS 71
Query: 63 --GWRVELSHNSKGGGGRGGRGRGGGE-------DLKCYECGEPGHFARECR 105
G RV + S G R GR RG D +CY+CGE GH+AR+C+
Sbjct: 72 IAGRRVRV-EPSNGMARRRGRDRGVSRRGRPFHPDDRCYQCGERGHYARDCK 122
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 20/121 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S DLE+EF +G L SVWVAR PPG+A+V F+D RDA DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRG---------------RGGGEDLKCYECGEPGHFARE 103
RV++S NS+ G RG RG D++CY C E GHFAR+
Sbjct: 73 ICDRKVRVDIS-NSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARD 131
Query: 104 C 104
C
Sbjct: 132 C 132
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 20/121 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S DLE+EF +G L SVWVAR PPG+A+V F+D RDA DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRG---------------RGGGEDLKCYECGEPGHFARE 103
RV++S NS+ G RG RG D++CY C E GHFAR+
Sbjct: 73 ICDRKVRVDIS-NSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARD 131
Query: 104 C 104
C
Sbjct: 132 C 132
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 20/121 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S DLE+EF +G L SVWVAR PPG+A+V F+D RDA DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRG---------------RGGGEDLKCYECGEPGHFARE 103
RV++S NS+ G RG RG D++CY C E GHFAR+
Sbjct: 73 ICDRKVRVDIS-NSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARD 131
Query: 104 C 104
C
Sbjct: 132 C 132
>gi|159484865|ref|XP_001700473.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158272360|gb|EDO98162.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 224
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 56/71 (78%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVGNL + E DLE EF FG LR++WVAR+PPG+AF+E DD RDA DA+RALDG
Sbjct: 1 MARVYVGNLPSGIREEDLETEFVRFGRLRNIWVARKPPGFAFIEMDDLRDAEDAVRALDG 60
Query: 61 KNGWRVELSHN 71
GWRVE+S N
Sbjct: 61 MKGWRVEISRN 71
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 20/121 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S DLE+EF +G L SVWVAR PPG+A+V F+D RDA DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRG---------------RGGGEDLKCYECGEPGHFARE 103
RV++S NS+ G RG RG D++CY C E GHFAR+
Sbjct: 73 ICDRKVRVDIS-NSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARD 131
Query: 104 C 104
C
Sbjct: 132 C 132
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+ +LED F +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 8 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 67
Query: 63 GW----RVELSHNSKGGGGRGGRGRGGGE---DLKCYECGEPGHFAREC 104
RVE+S+ S+G G D +CY+CG+ GH+AR+C
Sbjct: 68 ICGRRARVEMSNGSRGYGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 116
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 10/135 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG L ++ +LE+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDGK
Sbjct: 22 KVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDARDARDAVRALDGKM 81
Query: 62 ---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL---RIGSRG-LG 114
RVELS RG R +CY+CGE GH+AR+CR+ R SR +G
Sbjct: 82 LCGRRVRVELSTGKSRNSYRGS-SRPFQPTDRCYDCGERGHYARDCRVYSRRNSSRSPIG 140
Query: 115 S-GRRRSPSPRRRRS 128
GR S SP RR S
Sbjct: 141 KRGRSGSKSPSRRDS 155
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 8/117 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++YVG+L S++DLED F +G +R+VWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 16 KIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRS 75
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGEDL----KCYECGEPGHFARECRLRIGSR 111
RVELS+ G G G KCYECG+ GH+AR+CR G R
Sbjct: 76 ICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKCYECGDRGHYARDCRRFKGGR 132
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 8/111 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++YVG+L S++DLED F +G +R+VWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 16 KIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRS 75
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGEDL----KCYECGEPGHFARECR 105
RVELS+ G G G KCYECG+ GH+AR+CR
Sbjct: 76 ICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKCYECGDRGHYARDCR 126
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+++++GNL P + +RD+ED F FG LRS WVAR+PPG+ FVE++DRRDA DA+R DG
Sbjct: 1 MAKLWIGNLPPGIPDRDVEDVFAKFGRLRSCWVARKPPGFGFVEYEDRRDAEDAVRGTDG 60
Query: 61 KNGWRVELSHNS 72
KNGWRVE + +
Sbjct: 61 KNGWRVEFARAA 72
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LED F +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 12 KVYVGDLGSSATKEELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRI 71
Query: 62 ---NGWRVELSHNSK---GGGGRGGRGRGGGEDLKCYECGEPGHFAREC-RLR 107
RVE S+ + G R G GR + +CYECGE GH+AR C RLR
Sbjct: 72 ICGRRARVEPSNGRRLRDRGYFRRGIGRLFHPEDRCYECGEKGHYARNCQRLR 124
>gi|325303436|tpg|DAA34137.1| TPA_exp: alternative splicing factor SRp20/9G8 [Amblyomma
variegatum]
Length = 192
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG L ++ +LE+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDGK
Sbjct: 13 KVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKM 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
RVELS RG R +CY+CGE GH+AR+CR+
Sbjct: 73 LCGRRVRVELSTGKSRNSYRGS-SRPFQPTDRCYDCGERGHYARDCRV 119
>gi|242002226|ref|XP_002435756.1| RSZp22 protein, putative [Ixodes scapularis]
gi|215499092|gb|EEC08586.1| RSZp22 protein, putative [Ixodes scapularis]
Length = 199
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG L ++ +LE+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDGK
Sbjct: 13 KVYVGELGNSGTKHELEESFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKM 72
Query: 62 ---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
RVELS RG R +CY+CGE GH+AR+CR+
Sbjct: 73 LCGRRVRVELSTGKSRNSYRGS-SRPFQPTDRCYDCGERGHYARDCRV 119
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L ++++LED F +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 12 KVYVGDLGSGATKQELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 71
Query: 63 ----GWRVELSHNSKGGGG---RGGRGRGGGEDLKCYECGEPGHFARECRLRIGSR 111
RVE S+ + R G GR + +CYECGE GH+AR C+ +R
Sbjct: 72 ICGRRARVEPSNGRRLRDRSYFRRGIGRLFHPEDRCYECGERGHYARNCQRHRNTR 127
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+ +LED F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 8 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRT 67
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGE----DLKCYECGEPGHFAREC 104
RVE+S+ +G G RG R D +CY+CG+ GH+AR+C
Sbjct: 68 ICGRRARVEMSNGGRGYGSRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S+ +LE EF FG L+SVW+AR PPG+AFVEFDD RDA DA++ LD
Sbjct: 59 KVYVGNLGESASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDLDSST 118
Query: 63 --GWR--VELSHNSKGGGGRGGRGRGGGE-------DLKCYECGEPGHFARECRLR 107
G R VELS G G D KCYECGE GHFAR+C +
Sbjct: 119 ICGQRASVELSSGDSRRRGGFRGGGSFRGGRGPPRGDSKCYECGEIGHFARDCNRK 174
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 9/109 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L S +LE EF G LR VWVAR PPG+ F+ F+D RDA DA+R +DG
Sbjct: 1 MSRIFIGGLPEDASRTELEREFECIGRLRDVWVARNPPGFGFIIFEDPRDAEDAVREMDG 60
Query: 61 K----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
K + RVEL+ + GG RG + R + KCY CG+ GH +++CR
Sbjct: 61 KKICGSRIRVELAR-ATTGGSRGRQIR----NEKCYNCGKTGHLSKQCR 104
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 9/110 (8%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LE+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 8 KVYVGDLGSGASKQELEEAFSYYGPLRNVWVARNPPGFAFVEFEDVRDAEDAVRGLDGRT 67
Query: 63 GW----RVEL----SHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVEL S N G ED +CYECGE GH+AR+C
Sbjct: 68 ICGRRVRVELSTGKSRNRFRGPPPRRGRPFHPED-RCYECGERGHYARDC 116
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 8/107 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L S +LE EF FG LR VWVAR PPG+ F+ F+D RDA DA+R +DG
Sbjct: 1 MSRIFIGGLPEDASRNELEKEFESFGRLRDVWVARNPPGFGFIIFEDARDAEDAVREMDG 60
Query: 61 KN--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
K G R+ + GR GR + KCY C + GH +R+CR
Sbjct: 61 KRVCGSRIRVEFARGPATGRKGR------EEKCYNCNKFGHMSRDCR 101
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 173
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+++LED F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 12 KVYVGDLGSSASKQELEDAFGYYGPLRNVWVARNPPGFAFVEFEDPRDADDAVRGLDGRT 71
Query: 63 --GWRVELSHNS------KGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G RV + ++ + G RGR D +CYECGE GH+AR+C
Sbjct: 72 VCGRRVRVEPSNGMGGRRRDRGPPPRRGRPFNPDDRCYECGERGHYARDC 121
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 29/163 (17%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG+L ++++ED F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 14 AKVYVGDLGSNADKQEIEDAFSYYGPLRSVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGE---DLKCYECGEPGHFARECRLRIGSRGLG 114
RVELS G R GRG + +CYECG GHFAR+CR R G RG
Sbjct: 74 TICGRRARVELSTGKSARGYRSRGGRGRSPGRREDRCYECGNRGHFARDCRRRGGRRGRS 133
Query: 115 SG----------------------RRRSPSPRRRRSPSYGYGR 135
+R + SPRR +SP Y R
Sbjct: 134 RSRSRSRDREYRTRSRSYSRSPPPKRSNKSPRRSKSPRYNDSR 176
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 76
Query: 62 ---NGWRVELSHN-SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S S+ G GR R + D KCY+CG+ GH+A +C
Sbjct: 77 LCGSRVRVEMSTGLSRKGRGRLSRRQFDPND-KCYQCGDRGHYAYDC 122
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 8/110 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L S+ +LED F +G LR+VWVAR PPG+AFVEF+D RDA DAIR LDG+
Sbjct: 8 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 67
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGE----DLKCYECGEPGHFAREC 104
RVE+S+ +G GGRG R D +CY+CG+ GH+AR+C
Sbjct: 68 ICGRRARVEMSNGGRGYGGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|348523061|ref|XP_003449042.1| PREDICTED: hypothetical protein LOC100708809 [Oreochromis
niloticus]
Length = 240
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKV 76
Query: 62 ---NGWRVELSHN-SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S S+ G GR R + D +CY+CG+ GH+A +C
Sbjct: 77 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPND-RCYQCGDRGHYAYDC 122
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA++ +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGKV 75
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS + K GR R R + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRYGRPSR-RNFDPNDRCYQCGESGHYAYDC 122
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 73/116 (62%), Gaps = 13/116 (11%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L S++D+E+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 8 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGG---------EDLKCYECGEPGHFAREC 104
RVELS G GG GGRG D +CYECG GHFAR+C
Sbjct: 68 TISGRRARVELSTGRGGRGGGGGRGGPPRGGGKGGRFQSDDRCYECGGRGHFARDC 123
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + KCYECGE GH+A +C
Sbjct: 71 LISGSRVRVELSTGMPRRSRYERAPTNRPFDSNDKCYECGERGHYAYDC 119
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 19 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 79 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 128
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 120
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 120
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 1 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 61 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 109
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSDRCYECGEKGHYAYDCQ 120
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDARDAEDAVKGMDGKV 74
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS+ + K GR R + D +CY+CGE GH+A +C
Sbjct: 75 LCGARVRVELSNGMSRKSRYGRPSRRQFDPND-RCYQCGETGHYAYDC 121
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 120
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 13 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 72
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 73 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 121
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + K GR R R + +CY+CGE GH+A +C
Sbjct: 76 LCGSRIRVELSTGMSRKSRYGRPSR-RHFDPNDRCYQCGESGHYAYDC 122
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LR+VWVAR PPG+AFVEF+D RDA DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 74
Query: 62 ---NGWRVELSHN-SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S S+ G GR R + D +CY+CG+ GH+A +C
Sbjct: 75 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPND-RCYQCGDRGHYAYDC 120
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 120
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 72/118 (61%), Gaps = 15/118 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L S++D+E+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 8 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGG-----------EDLKCYECGEPGHFAREC 104
RVELS G GG GG G D +CYECG GHFAR+C
Sbjct: 68 TISGRRARVELSTGRGGRGGGGGGRGGPPRGGGKPGGRFQSDDRCYECGGRGHFARDC 125
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH 120
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LR+VWVAR PPG+AFVEF+D RDA DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 74
Query: 62 ---NGWRVELSHN-SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S S+ G GR R + D +CY+CG+ GH+A +C
Sbjct: 75 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPND-RCYQCGDRGHYAYDC 120
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 2 QTKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDG 61
Query: 61 K----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
K + RVELS + R R + +CYECGE GH+A +C
Sbjct: 62 KVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 111
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|260826882|ref|XP_002608394.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
gi|229293745|gb|EEN64404.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
Length = 132
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L R +ER+L D F +G LR+VWVAR PPG+AFVEF+D RDA DA++ LD +
Sbjct: 17 KVYVGDLGTRGNERELRDIFSYYGPLRNVWVARNPPGFAFVEFEDPRDAKDAVKHLDRRE 76
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGEDL-------KCYECGEPGHFAREC 104
RVE+ S GGG R G +CYECGE GH+AR+C
Sbjct: 77 ICGAPARVEM---STGGGRRSRYGPPPPYYRRPFDPLDRCYECGERGHYARDC 126
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 147
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Papio
anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c [Homo
sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 20 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 80 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 128
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 40 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 100 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a [Homo
sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 147
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 19 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 79 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 127
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 110
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 110
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSDRCYECGEKGHYAYDCQ 120
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 6 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 65
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 66 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 114
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b [Homo
sapiens]
Length = 132
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 110
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R R +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSDRCYECGEKGHYAYDCQ 120
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 15/120 (12%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S+ +LE EF FG L+SVW+AR P G+AFVE++D RDA DA++ +D
Sbjct: 33 KVYVGNLGESASKSELEKEFGRFGPLKSVWIARNPAGFAFVEYEDPRDASDAVKDMDSST 92
Query: 63 ----GWRVELSHNSKGGGGRGGRGRGGGE-----------DLKCYECGEPGHFARECRLR 107
RVELS G G G GGG D KCYECGE GHFAR+C +
Sbjct: 93 ICGQRARVELSSGDSRRRGFRGGGGGGGGSFRGGRGPPRGDSKCYECGETGHFARDCHRK 152
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 182
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L ++ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA R LD
Sbjct: 14 KVYVGDLGTNGTKHEIERAFSYYGPLRNVWVARNPPGFAFVEFEDPRDASDACRGLDKTK 73
Query: 63 GWRVELSHNSKGGGGRGGR-----GRGGGEDLKCYECGEPGHFAREC 104
VE+ G R + R + +CYECG+ GHFAR+C
Sbjct: 74 LCGVEIRAELSSGKSRWAKWGRPPPRRSFSEERCYECGKRGHFARDC 120
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 1 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 60
Query: 62 ---NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 61 ICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 108
>gi|15928796|gb|AAH14857.1| Sfrs7 protein [Mus musculus]
Length = 226
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LR+VWVAR PPG+AFVE++D RDA DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEYEDARDAEDAVKGMDGKV 76
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + K GR R +D +CY+CG+ GH+A +C
Sbjct: 77 LCGSRIRVELSTGMSRKTKHGRPSRRHFDPQD-RCYQCGDRGHYAYDC 123
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 74/124 (59%), Gaps = 21/124 (16%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L S++++ED F +G LR+VWVAR PPG+AFVEFDD RDA D++R LDG+
Sbjct: 12 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFDDARDAEDSVRGLDGR 71
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGG-----------------GEDLKCYECGEPGHF 100
RVELS G G RGG G GG D +CYECG GH+
Sbjct: 72 TVCGRRVRVELSTGKGGRGFRGGGGGGGGGGGGGPPRGKGGRGAFNPDDRCYECGGRGHY 131
Query: 101 AREC 104
AR+C
Sbjct: 132 ARDC 135
>gi|350538991|ref|NP_001232123.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
gi|197127816|gb|ACH44314.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
Length = 250
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 44 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 103
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 104 VICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 152
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 12/112 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL+ + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA++ LDGK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGG-----EDLKCYECGEPGHFAREC 104
+ RVEL S G R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEL---STGLPRRSRYDRPPARCPFDPNDRCYECGEKGHYAYDC 119
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 25/125 (20%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L S++++ED F +G LR+VWVAR PPG+AFVEF+D RDA D++R LDG+
Sbjct: 8 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 62 N----GWRVELSHNSKGG------------------GGRGGRGRGGGEDLKCYECGEPGH 99
RVELS G + GR D +CYECG GH
Sbjct: 68 TICGRRARVELSTGKGGRGLRGGDRGGGDRGRGGPPSSKSGRFH---PDDRCYECGGRGH 124
Query: 100 FAREC 104
+AR+C
Sbjct: 125 YARDC 129
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS + K R R R + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPSR-RHFDPNDRCYQCGENGHYAYDC 122
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 12/112 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL+ + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA++ LDGK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGG-----EDLKCYECGEPGHFAREC 104
+ RVEL S G R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEL---STGLPRRSRYDRPPARCPFDPNDRCYECGEKGHYAYDC 119
>gi|449274552|gb|EMC83653.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 197
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+ LDGK
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 61
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 62 IICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDC 110
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 68/115 (59%), Gaps = 18/115 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGG--------GEDLKCYECGEPGHFAREC 104
+ RVELS G R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELST------GMPRRSRFDRPPARCPFDPNDRCYECGEKGHYAYDC 119
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 68/115 (59%), Gaps = 18/115 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGG--------GEDLKCYECGEPGHFAREC 104
+ RVELS G R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELST------GMPRRSRFDRPPARCPFDPNDRCYECGEKGHYAYDC 119
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+A PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIAGNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVGNL + DLE EF +G L +VWVA+ PPG+A+VEF+D RDA DAI+ LDGK
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGG--EDLKCYECGEPGHFARECRL 106
RVE SH G +CY CGE GH+A +C L
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRSRRAFHPSDRCYNCGETGHYAYDCDL 115
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS + K R R R + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPSR-RHFDPNDRCYQCGENGHYAYDC 122
>gi|21749793|dbj|BAC03661.1| unnamed protein product [Homo sapiens]
Length = 137
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PP +AFVEF+D RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG+L ++ +LE F +G LRSVWVAR PPG+AFVE++D RDA DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH--NSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
RVELS + K R R R + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPSR-RHFDPNDRCYQCGENGHYAYDC 122
>gi|194386188|dbj|BAG59658.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+ RDA DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEGPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVELS + R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 10/89 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AF+EF+D RDA DA+RALDG
Sbjct: 11 KVYVGGLPNDATSQELEDAFHRFGRIRKVWVARRPPGFAFIEFEDSRDAEDAVRALDGTR 70
Query: 63 ----GWRVELSHNSKG------GGGRGGR 81
RVELSH + GG RGGR
Sbjct: 71 ICGVRARVELSHGRRRNGAPDYGGSRGGR 99
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+ LDGK
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 69 IICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDCH 118
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+ LDGK
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 62 ----NGWRVELSHN--SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVE+S + R R + +CYECGE GH+A +C
Sbjct: 69 IICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDCH 118
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 24/125 (19%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G+L SER+LE FR +G LR+VWVAR PPG+AFVEF+D DA DA+R LDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 ----NGWRVELS------------------HNSKGGGGRGGRGRGGGEDLKCYECGEPGH 99
RVELS G G R R + +CYECGE GH
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSR--RMKPFDPADRCYECGERGH 127
Query: 100 FAREC 104
+A +C
Sbjct: 128 YAYDC 132
>gi|384248651|gb|EIE22134.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 797
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 86/181 (47%), Gaps = 50/181 (27%)
Query: 21 EFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD-GKNGWRVELSHNSKGGGGRG 79
+F FG LRSVWVAR+PPG+AF+E++D RDA DA+R LD G GWRVE S +G GG
Sbjct: 19 QFIRFGTLRSVWVARKPPGFAFIEYEDVRDAEDAVRKLDGGPQGWRVEFSRKDRGPGGGR 78
Query: 80 GRGRGGG---------------EDLKCYECGEPGHFARECRL------------------ 106
G GR ++KCYECGE GHFAR+CR
Sbjct: 79 GGGRDDFRGGGGGGGGGGGGMRSEMKCYECGEMGHFARDCRARGGGGGGGGGGDRYGDRD 138
Query: 107 ------------RIGSRGLGSGRRRSPS--PRRRRSPSYGYGRRCGSRAMSSSAMAQGSY 152
R SR RRRSPS R RRSPSY R + +AQ Y
Sbjct: 139 GGRRGRSRSPVRRAASR--SPVRRRSPSYDARPRRSPSYEPRARRNGATHTGEDLAQNDY 196
Query: 153 T 153
Sbjct: 197 V 197
>gi|225711580|gb|ACO11636.1| Splicing factor, arginine/serine-rich 7 [Caligus rogercresseyi]
Length = 332
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R++V +LD S+RD+E F FG L+ +W+AR P +AF F R DA DA+R DG
Sbjct: 191 RIHVADLDVSASKRDMEKVFGKFGPLKEIWMARSVPCFAFCVFRYREDAEDAVRTSDGTE 250
Query: 62 -NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGRRRS 120
+G R+ ++H GRG RG +++CY+CG+ GHF+R+C G +R
Sbjct: 251 VSGRRIRVTHARPRTKGRG--RRGFNPNMRCYQCGDRGHFSRDC------PDTKYGYKRP 302
Query: 121 PSPRRRRSPSYGYGRRCGS 139
PSPR YGRR S
Sbjct: 303 PSPR--------YGRRGDS 313
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 24/125 (19%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G+L SER+LE FR +G LR+VWVAR PPG+AFVEF+D DA DA+R LDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 ----NGWRVELS------------------HNSKGGGGRGGRGRGGGEDLKCYECGEPGH 99
RVELS G G R R + +CYECGE GH
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSR--RMKPFDPADRCYECGERGH 127
Query: 100 FAREC 104
+A +C
Sbjct: 128 YAYDC 132
>gi|291230091|ref|XP_002735001.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 227
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRV+VG+L S R++E F +G L VWVAR PP +AFV F DA +A+ +DG+
Sbjct: 44 SRVHVGDLGIDCSRREIEKAFAKYGKLYEVWVARNPPCFAFVVFKRSSDAEEAVHDMDGR 103
Query: 62 N--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
G RV +S GRG RG +L+CY+CGE GHF+R+CR
Sbjct: 104 MLCGGRVRVSLARPRTQGRG--RRGYDPNLRCYQCGERGHFSRDCR 147
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 34/132 (25%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVGNL + DLE EF +G L +VWVA+ PPG+A+VEF+D RDA DAI+ LDGK
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDL-----------------------KCYEC 94
RVE SH R RG D +CY C
Sbjct: 65 ELHGRRIRVERSHGMP-------RNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNC 117
Query: 95 GEPGHFARECRL 106
GE GH+A +C L
Sbjct: 118 GETGHYAYDCDL 129
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 34/132 (25%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVGNL + DLE EF +G L +VWVA+ PPG+A+VEF+D RDA DAI+ LDGK
Sbjct: 13 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDL-----------------------KCYEC 94
RVE SH R RG D +CY C
Sbjct: 73 ELHGRRIRVERSHGMP-------RNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNC 125
Query: 95 GEPGHFARECRL 106
GE GH+A +C L
Sbjct: 126 GETGHYAYDCDL 137
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 69/127 (54%), Gaps = 26/127 (20%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G+L SER+LE FR +G LR+VWVAR PPG+AFVEF+D DA DA+R LDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NG----WRVELS--------------------HNSKGGGGRGGRGRGGGEDLKCYECGEP 97
RVELS G G R R + +CYECGE
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGIGSR--RMKPFDPTDRCYECGER 127
Query: 98 GHFAREC 104
GH+A +C
Sbjct: 128 GHYAYDC 134
>gi|71834670|ref|NP_001025438.1| serine/arginine-rich splicing factor 7 [Danio rerio]
gi|66911407|gb|AAH97250.1| Splicing factor, arginine/serine-rich 7 [Danio rerio]
Length = 178
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 14/114 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LRSVW+AR P G+AFVEF+D RDA D++R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGR------GRGGGEDLKCYECGEPGHFARECR 105
+ RVELS G R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELS----TGMPRRSRYDHPPSRRPFDPNDRCYECGEKGHYAYDCH 120
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 179
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + +LE F +G LR+VWV+R PPG+AF+EF+D RDA DAIR LD +
Sbjct: 12 KVYVGELGTNGTRHELEKAFSYYGPLRNVWVSRNPPGFAFIEFEDARDASDAIRGLDKRR 71
Query: 63 ----GWRVELSHNSKGGGGRGGRG-------RGGGEDLKCYECGEPGHFAREC 104
RVELS GG GG R + +CYECG+ GHFAR+C
Sbjct: 72 VCGVEVRVELSSGKSRRGGGGGGRGGGRPPQRRSFSEERCYECGKHGHFARDC 124
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 69/127 (54%), Gaps = 26/127 (20%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G+L SER+LE FR +G LR+VWVAR PPG+AFVEF+D DA DA+R LDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 ----NGWRVELS--------------------HNSKGGGGRGGRGRGGGEDLKCYECGEP 97
RVELS G G R R + +CYECGE
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGIGSR--RMKPFDPTDRCYECGER 127
Query: 98 GHFAREC 104
GH+A +C
Sbjct: 128 GHYAYDC 134
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL ERDL DEF FG L VWVAR PPG+AFV F D RDA DA+R +DGK
Sbjct: 7 TKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDGK 66
Query: 62 N----GWRVELSHN 71
+ WRVE+SH
Sbjct: 67 SIAGREWRVEVSHQ 80
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 70/125 (56%), Gaps = 20/125 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L + DLE F +G LRSVW+AR PPG+AFVEF+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 ----GWRVELS----------------HNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAR 102
RVELS GG G RG GG D KCYECG GHFAR
Sbjct: 69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFAR 128
Query: 103 ECRLR 107
CR R
Sbjct: 129 HCRER 133
>gi|225714302|gb|ACO12997.1| Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis]
Length = 306
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R++V +LD ++RD+E F FG L+ +W+AR P +AFV F R DA D +R+ DG
Sbjct: 164 RIHVADLDVSATKRDMEKVFGKFGPLKEIWMARSVPCFAFVVFRYREDAEDGVRSADGVE 223
Query: 62 -NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGRRRS 120
+G R+ ++H GRG RG +++CY+CG+ GHF+R+C G +R
Sbjct: 224 ISGRRIRVTHARPRTKGRG--RRGFNPNMRCYQCGDRGHFSRDC------PDTKYGYKRP 275
Query: 121 PSPR 124
PSPR
Sbjct: 276 PSPR 279
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AFVEF+D RDA DA++ALDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AFVEF+D RDA DA + LDG
Sbjct: 12 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 62 N--GWRVELSHNSKGGGGRGG 80
G R + +S+ RGG
Sbjct: 72 RICGVRAAVEMSSRKKKNRGG 92
>gi|443725386|gb|ELU13009.1| hypothetical protein CAPTEDRAFT_155905 [Capitella teleta]
Length = 204
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG-- 60
RVYVG+L P S+R+LE F FG + VWVA+ PP +AF+ + + DA DAIR ++G
Sbjct: 38 RVYVGDLGPDPSKRELEKLFEKFGPVMEVWVAKNPPCFAFIVYKHKEDAEDAIRDMNGVE 97
Query: 61 KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+G RV S GR R G +++CY CGE GHF+R+C
Sbjct: 98 VSGHRVRCSLALPRSRGR-KRPSGFDPNMRCYSCGERGHFSRDC 140
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 14 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 73
Query: 63 GW----RVELSHNSKGGGGRG 79
RVELS K RG
Sbjct: 74 MCGCRVRVELSTGEKRSRSRG 94
>gi|126631485|gb|AAI33852.1| Sfrs7 protein [Danio rerio]
Length = 210
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 14/113 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LRSVW+AR P G+AFVEF+D RDA D++R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGK 70
Query: 62 ----NGWRVELSHNSKGGGGRGGR------GRGGGEDLKCYECGEPGHFAREC 104
+ RVELS G R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELST----GMPRRSRYDHPPSRRPFDPNDRCYECGEKGHYAYDC 119
>gi|47229637|emb|CAG06833.1| unnamed protein product [Tetraodon nigroviridis]
Length = 222
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ DLE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 --GWRVELSHNSKGGGGRGGRGRG 84
G RV + H+S G + R RG
Sbjct: 70 LCGCRVRVEHSS---GEKRSRARG 90
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 21/126 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S +LE+ F +G +++VWVAR PPG+AFV F+D RDA DA +ALD +N
Sbjct: 17 KVYVGNLPSGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDRN 76
Query: 63 --GWRVELSHNS-------------------KGGGGRGGRGRGGGEDLKCYECGEPGHFA 101
G RV + +S GGG GGR G ++ +CYECG+ GHFA
Sbjct: 77 VCGVRVRVEMSSGESRRSRDRGDRGGDRGHRGGGGFMGGRRGGMRDNERCYECGQRGHFA 136
Query: 102 RECRLR 107
R+C R
Sbjct: 137 RDCDRR 142
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VGNL + + DLE+EFR FG L VWVAR+PPG+AFV+F+D+RDA DA++ L+ +
Sbjct: 47 QVFVGNLPDDIEKMDLENEFRQFGRLLDVWVARKPPGFAFVKFEDQRDAEDAVQGLNRRT 106
Query: 63 GW----RVELSH 70
+ RVE+SH
Sbjct: 107 AFGREIRVEISH 118
>gi|410919593|ref|XP_003973268.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Takifugu
rubripes]
Length = 173
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ DLE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 18 KVYVGNLGSNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDSRDATDAVRELDGRT 77
Query: 63 --GWRVELSHNSKGGGGRGGRGRG 84
G RV + H+S G + R RG
Sbjct: 78 LCGCRVRVEHSS---GEKRSRARG 98
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 68/124 (54%), Gaps = 22/124 (17%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L + DLE F +G LRSVW+AR PPG+AFVEF+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 ----GWRVELSHNS------------------KGGGGRGGRGRGGGEDLKCYECGEPGHF 100
RVELS G GGR G GG D KCYECG GHF
Sbjct: 69 VCGRRARVELSTGKYARSGGGAGGGGGGGGGGGGAGGRDRGGAGGRGDDKCYECGGRGHF 128
Query: 101 AREC 104
AR C
Sbjct: 129 ARHC 132
>gi|432106513|gb|ELK32262.1| Serine/arginine-rich splicing factor 7 [Myotis davidii]
Length = 226
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G L +VW+AR PPG+AFV F+D RDA DA+R LDGK
Sbjct: 17 TKVYVGNLATGAGKGELERAFSYYGPLTTVWIARNPPGFAFVGFEDPRDAEDAVRGLDGK 76
Query: 62 ----NGWRVELSHNS--KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ RVELS + R + +CYECGE GH+A C
Sbjct: 77 VICDSRVRVELSTGMPRRSYLDRPPARHPFDPNDRCYECGEKGHYAYYCH 126
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AFVEF+D RDA DA++ALDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S+ +LED FR +G +RSVWVAR PPG+AFVEF+D RDA DA +ALDG
Sbjct: 13 KVYVGNLGDNASKHELEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDASKALDGSR 72
Query: 63 --GWR--VELSHNSKGGGGRGGR 81
G R VE+S K GGR
Sbjct: 73 ICGVRATVEMSSRKKRNRRVGGR 95
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L + +LE EF G +R +WVAR PPG+ F+ F+D RDA DA+R +DG
Sbjct: 1 MSRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDG 60
Query: 61 K----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
K + RVE + G G GG + KCY CG+ GH +REC
Sbjct: 61 KRVCGSKVRVEKARGPSNGQKGRQGGGGGRNE-KCYNCGKVGHISREC 107
>gi|308492842|ref|XP_003108611.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
gi|308248351|gb|EFO92303.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
Length = 155
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGWRVELSHN 71
EL N
Sbjct: 63 ESAEYELVSN 72
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 68/122 (55%), Gaps = 20/122 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L + DLE F +G LRSVW+AR PPG+AFVEF+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 ----GWRVELS----------------HNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAR 102
RVELS GG G RG GG D KCYECG GHFAR
Sbjct: 69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFAR 128
Query: 103 EC 104
C
Sbjct: 129 HC 130
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AFVEF+D RDA DA++ALDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|391339219|ref|XP_003743949.1| PREDICTED: RNA-binding protein 1-like [Metaseiulus occidentalis]
Length = 78
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL S D+E F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDG
Sbjct: 11 KVYIGNLANHTSRHDIEAAFGKYGSLRNVWVARNPPGFAFVEFEDSRDAEDAVRALDG 68
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AFVEF+D RDA DA++ALDG
Sbjct: 20 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 79
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 80 ICGVRARVEISH 91
>gi|344244643|gb|EGW00747.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 161
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE +F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELEHDFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSK 73
RVELS+ K
Sbjct: 71 LCGCPVRVELSNGEK 85
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + ++LED F FG +R VWVARRPPG+AFVEF+D RDA DA++ALDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VY+GNL S D+E F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDG
Sbjct: 11 KVYIGNLANHTSRHDIESAFGKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRALDGSR 70
Query: 63 --GWRV--ELSH 70
G RV E+SH
Sbjct: 71 ICGSRVKCEMSH 82
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D+RDA DA R+LDG+
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDACRSLDGQR 71
Query: 62 ---NGWRVELS 69
RVE+S
Sbjct: 72 CCGTRIRVEMS 82
>gi|391339283|ref|XP_003743981.1| PREDICTED: uncharacterized protein LOC100904514 [Metaseiulus
occidentalis]
Length = 218
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL S D+E F +G LR+VWVAR PPG+AFVEFDD RDA DA RALDG
Sbjct: 149 KVYIGNLANHTSRHDIESAFGKYGSLRNVWVARNPPGFAFVEFDDSRDAEDACRALDG 206
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDLRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AFVEF+D RDA DA + LDG
Sbjct: 10 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDG 68
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AFVEF+D RDA DA + LDG
Sbjct: 10 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDG 68
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++YVGNL P ++ ++E+ F FG LR+VWVAR PPG+A+VEF+D RDA DA+++L+GK
Sbjct: 13 KIYVGNLPPGAAKHEIEERFSDFGRLRNVWVARNPPGFAYVEFEDHRDARDAVKSLNGKM 72
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVE SH + RG
Sbjct: 73 ICGVRSRVEFSHGMRRPSRRG 93
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + +++ED F FG +R VWVARRPPG+AFVEF+D RDA D+++ALDG
Sbjct: 11 KVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 ----GWRVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+N
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRN 74
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS K RG
Sbjct: 75 MCGCKLRVELSTGEKRSRSRG 95
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G L++VWVAR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLKNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ ++E F FG LR+VWVAR PPG+AFVEF+D RDA DA RALDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S+ ++E+ F +G LR+VW+AR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKFEIENAFNKYGPLRNVWIARNPPGFAFVEFEDRRDAEDATRALDGTR 71
Query: 63 --GWRVELSHNSKGGGGRGGRG 82
G R+ + +S R RG
Sbjct: 72 CCGTRIRVEMSSGRSRDRALRG 93
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + +++ED F FG +R VWVARRPPG+AFVEF+D RDA D+++ALDG
Sbjct: 11 KVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 GW----RVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ ++E F FG LR+VWVAR PPG+AFVEF+D RDA DA RALDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VY+GNL S D+E F +G LR+VWVAR PPG+AFVEF+D RDA DA+RA+DG
Sbjct: 11 KVYIGNLATHASRHDVESVFSKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRAVDGSR 70
Query: 63 --GWRV--ELSH 70
G RV E+SH
Sbjct: 71 ICGSRVKCEMSH 82
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ ++E F FG LR+VWVAR PPG+AFVEF+D RDA DA RALDG
Sbjct: 28 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 87
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 88 LCGTRVRVEMSH 99
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NG----WRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELEHAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VY+GNL R ++ D+E F +G +R+VWVAR PPG+AFVEF+D RDA DA++ALDG
Sbjct: 12 KVYIGNLGSRATKDDIEAVFSRYGPIRNVWVARNPPGFAFVEFEDSRDAEDAVKALDGTR 71
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 72 ICGARVRVEMSH 83
>gi|148680433|gb|EDL12380.1| mCG2011 [Mus musculus]
Length = 156
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS++ K RG
Sbjct: 71 LCGCRVRVELSNDEKRSRNRG 91
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ ++E F FG LR+VWVAR PPG+AFVEF+D RDA DA RALDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VY+GNL+P + D+E F FG + ++WVARRPPG+AFV F+D RDA DAI LDG
Sbjct: 12 KVYIGNLNPEATVEDVESLFSKFGTIGNIWVARRPPGFAFVTFEDPRDATDAIEELDGSE 71
Query: 62 ---NGWRVELS 69
+VELS
Sbjct: 72 YKGQNLKVELS 82
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NG----WRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 55 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 112
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 N----GWRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 3 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 62
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 63 LCGCRVRVELSNGEKRSRNRG 83
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEFDDRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFDDRRDAEDATRGLDG 69
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ +LE +F +G LR++WVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHELEGKFSKYGPLRNIWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRNRNRG 91
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 75 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 134
Query: 63 ----GWRVELSHNSK 73
RVELS+ K
Sbjct: 135 LCGCRVRVELSNGEK 149
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|148690657|gb|EDL22604.1| mCG21131, isoform CRA_b [Mus musculus]
Length = 129
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKHEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|119624305|gb|EAX03900.1| splicing factor, arginine/serine-rich 3, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D+RDA DA+R+LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDG 69
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D+RDA DA+R+LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDG 69
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L + +++ED F +G +R VWVARRPPG+AFVEF+D RDA D+++ALDG
Sbjct: 11 KVYVGGLPQDATSQEVEDAFSRYGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 GW----RVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|156354444|ref|XP_001623404.1| predicted protein [Nematostella vectensis]
gi|156210099|gb|EDO31304.1| predicted protein [Nematostella vectensis]
Length = 82
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M++VY+G+L S+R++E+EF +G L+ VWVAR PPG+AF FDDRRDA DA+R LDG
Sbjct: 1 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDG 60
Query: 61 K----NGWRVELSHNSKGG 75
+ RVEL+ G
Sbjct: 61 RYICGQRVRVELAKGPSRG 79
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL + S+ +LE F +G L++VWVAR PPG+AFVEF+D RDA DA+RALDG+
Sbjct: 12 KVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNRDAEDAVRALDGRT 71
Query: 63 ----GWRVELS 69
RVE+S
Sbjct: 72 VCGVRARVEMS 82
>gi|149043497|gb|EDL96948.1| rCG61099, isoform CRA_a [Rattus norvegicus]
Length = 129
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 39 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 96
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 N----GWRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|281338419|gb|EFB14003.1| hypothetical protein PANDA_002213 [Ailuropoda melanoleuca]
Length = 114
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G L++VW+AR PPG+AFVEF+DRRDA DA RALDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLKNVWIARNPPGFAFVEFEDRRDAEDATRALDG 69
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 75 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRDLDGRT 134
Query: 63 ----GWRVELSHNSK 73
RVELS+ K
Sbjct: 135 LCGCRVRVELSNGEK 149
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D+RDA DA+R+LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDG 69
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 ----GWRVELSHNSKGGGGRGG 80
RVELS+ K RG
Sbjct: 70 LCGCRVRVELSNGEKRSRSRGA 91
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 62 ---NGWRVELSHNSKGGGGRG 79
+ RVELS+ K RG
Sbjct: 75 LSGSRVRVELSNGEKRTRNRG 95
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 75 LSGCRVRVELSNGEKRTRSRG 95
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKSELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 70 LCGCRVRVELSNGEKRTRSRG 90
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL + ++E+ F +G LR+VWVAR PPG+AFVEF+D RDA DA+RALDG
Sbjct: 13 KVYVGNLGSNAARGEIEEAFSKYGTLRNVWVARNPPGFAFVEFEDPRDAEDAVRALDG 70
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 48 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 107
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 108 LCGCRVRVELSNGEKRSRNRG 128
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 62 ---NGWRVELSHNSKGGGGRG 79
+ RVELS+ K RG
Sbjct: 75 LSGSRVRVELSNGEKRTRNRG 95
>gi|209147621|gb|ACI32898.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 62 ---NGWRVELSHNSKGGGGRG 79
+ RVELS+ K RG
Sbjct: 75 LSGSRVRVELSNGEKRTRNRG 95
>gi|209154702|gb|ACI33583.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 62 ---NGWRVELSHNSKGGGGRG 79
+ RVELS+ K RG
Sbjct: 75 LSGSRVRVELSNGEKRTRNRG 95
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 ----GWRVELSHNSKGGGGRGG 80
RVELS+ K RG
Sbjct: 70 LCGCRVRVELSNGEKRSRSRGA 91
>gi|348507887|ref|XP_003441487.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Oreochromis niloticus]
Length = 165
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 ----GWRVELSHNSKGGGGRGG 80
RVELS K RG
Sbjct: 70 LCGCRVRVELSTGEKRSRTRGA 91
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 10 KVYVGNLGNNGNKTELEWAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 69
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 70 LCGCRVRVELSNGEKRSRNRG 90
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSK 73
RVELS+ K
Sbjct: 71 LCGCRVRVELSNGEK 85
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIETAFSKYGPLRNVWVARNPPGFAFVEFEDSRDAEDAVRGLDG 69
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F FG LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKFGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG L R S +LE+ F FG LR+VWVARRP G+AFVEF+D RDA+DA+R LDG
Sbjct: 37 KVYVGGLPERASRGELEEIFGRFGPLRNVWVARRPWGFAFVEFEDARDAIDAVRQLDGSR 96
Query: 63 G----WRVELSHNSKGGGGRGGRG 82
RVELSH + RG RG
Sbjct: 97 MCGVRARVELSHGQR--RNRGPRG 118
>gi|444723316|gb|ELW63974.1| Serine/arginine-rich splicing factor 7 [Tupaia chinensis]
Length = 123
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 64 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 123
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 100
>gi|50344760|ref|NP_001002053.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
gi|47940341|gb|AAH71322.1| Splicing factor, arginine/serine-rich 3a [Danio rerio]
Length = 174
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 ----GWRVELSHNSK 73
RVE+S+ K
Sbjct: 75 LCGCRVRVEMSNGEK 89
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 100
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 100
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 100
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNL + + E F +G LRSVW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 20 TKVYVGNLGTGAGKGEYERAFSYYGPLRSVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 62 ----NGWRVELS 69
+ RVELS
Sbjct: 80 VICGSRVRVELS 91
>gi|344284955|ref|XP_003414230.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
Length = 170
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGKNGNKTELEQAFGYYGPLRSVWVARNAPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCCVRVELSNGEKRSRSRG 91
>gi|332018153|gb|EGI58759.1| Splicing factor, arginine/serine-rich 7 [Acromyrmex echinatior]
Length = 221
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVG+L S++ LED F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 66 KVYVGDLGSSASKQQLEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 124
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AF EF+D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFAEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR+PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R L+G+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR+PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++VY+G+L SER+LE FR +G LR+VWVAR PPG+AFVEF+D DA DA+R LDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|158224|gb|AAA28850.1| RNA binding protein [Drosophila melanogaster]
Length = 135
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+DRRDA DA ALDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDG 69
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 N----GWRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL S+ +LED F +G L++VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 69
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|348521764|ref|XP_003448396.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Oreochromis niloticus]
Length = 168
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 74
Query: 63 GW----RVELSHNSKGGGGRG 79
RVELS K RG
Sbjct: 75 MCGCRVRVELSTGEKRSRSRG 95
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL S+ +LED F +G L++VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 69
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL S+ +LED F +G L++VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 69
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 N----GWRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E+ F +G LR+VWVAR PPG+AFVEF+DRRDA DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E +F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIEGKFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 25/130 (19%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
VYVG L R ERDLED F +G ++R A GYAF+E++D RDA DA+R +DG
Sbjct: 8 VYVGRLSSRTRERDLEDAFSKYGRIIRLDMKA----GYAFIEYNDSRDADDAVRGMDGND 63
Query: 62 -NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGRRRS 120
+G R+ + + +G G +C+ CG+ GH+AR+CR G RG G R
Sbjct: 64 LDGARISVEPSHRGEG-------------RCFSCGKEGHWARDCRE--GPRG---GSRMD 105
Query: 121 PSPRRRRSPS 130
P RR P+
Sbjct: 106 PRDRRGAGPA 115
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 16 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 73
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 16 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 73
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + ++LE+ F FG +R VWVARRPPG+AFVE+DD RDA DA+RALDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 N----GWRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRTVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 74
Query: 63 GW----RVELSHNSKGGGGRG 79
RVELS K RG
Sbjct: 75 MCGCRVRVELSTGEKRSRSRG 95
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 13 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 70
>gi|209737830|gb|ACI69784.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
gi|209738644|gb|ACI70191.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG++ + DLE EF +G LRSVWVAR PP + FVE+ D RDA DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
W VEL+ +K G +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPSNHHIDPQG---RCNQCGNRGHYAYNC 118
>gi|443725388|gb|ELU13011.1| hypothetical protein CAPTEDRAFT_223451 [Capitella teleta]
Length = 154
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++YVG+L SER+LE F +G L++VWVAR PPG+AF+E++D RDA DA+R+LDG
Sbjct: 13 KIYVGDLPRDASERELERAFSYYGPLKNVWVARNPPGFAFIEYEDPRDADDAVRSLDGST 72
Query: 63 --GWRVELSHNS 72
G R + H++
Sbjct: 73 ICGVRARVEHST 84
>gi|343960046|dbj|BAK63877.1| splicing factor, arginine/serine-rich 3 [Pan troglodytes]
Length = 124
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVE +D RDA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVESEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|209735146|gb|ACI68442.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG++ + DLE EF +G LRSVWVAR PP + FVE+ D RDA DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
W VEL+ +K G +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPSNHHIDPQG---RCNQCGNRGHYAYNC 118
>gi|354472430|ref|XP_003498442.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
Length = 167
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL ++ +L+ F +G LRSVWVAR PPG+ FV+F+D RDA DA+R LDGK
Sbjct: 11 KVYVGNLGNNANKTELKWAFGYYGPLRSVWVARNPPGFVFVKFEDPRDATDAVRELDGKR 70
Query: 62 -NGWRV--ELSHNSKGGGGRG 79
+G RV ELS+ K RG
Sbjct: 71 LSGCRVKMELSNGEKRSLNRG 91
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 74
Query: 63 ----GWRVELSH 70
RVELS+
Sbjct: 75 LCGCRVRVELSN 86
>gi|209738068|gb|ACI69903.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 158
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG++ + DLE EF +G LRSVWVAR PP + FVE+ D RDA DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
W VEL+ +K G +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPSNHHIDPQG---RCNQCGNRGHYAYNC 118
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AF+EF+D DA DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFIEFEDPPDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 70
Query: 63 ----GWRVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG++
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 70
Query: 63 ----GWRVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL + DLE F +G L++VWVAR PPG+AFVE++D RDA DA+RA+DG
Sbjct: 12 KVYVGNLGNNTARGDLEASFSKYGALKNVWVARNPPGFAFVEYEDPRDAEDAVRAMDG 69
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG+L E++LE F +G L+SVWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 30 TKVYVGDLPRDAQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 62 N----GWRVELS 69
+ RVELS
Sbjct: 90 SLCGTRVRVELS 101
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V VGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+
Sbjct: 11 KVCVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS+ K RG
Sbjct: 71 LCGCRVRVELSNGEKRSRNRG 91
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor
9g8
Length = 101
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL + +LE F +G LR+VW+AR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 2 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 61
Query: 62 ---NGWRVELS 69
+ RVELS
Sbjct: 62 ICGSRVRVELS 72
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|291230087|ref|XP_002734999.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 315
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L S+ ++E F FG + VWVAR PP +AFV + R DA +A+R +DG+
Sbjct: 63 TRLYVGDLGIDCSKTEIERSFGRFGKITEVWVARNPPCFAFVVYKRREDAEEAMREMDGR 122
Query: 62 N--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
G RV + N RG RG +L+CY+CGE GHF+R+CR
Sbjct: 123 MVCGGRVRV--NIARPRTRGRGRRGFDPNLRCYQCGERGHFSRDCR 166
>gi|339521945|gb|AEJ84137.1| splicing factor [Capra hircus]
Length = 124
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVGNL ++ +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDGK
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAGDAVRELDGK 69
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ ++E F +G LR+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGSNASKHEIEAAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 69
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L + DLE F +G LRSVW+AR PPG+AFVEF+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 GW----RVELS 69
RVELS
Sbjct: 69 VCGRRARVELS 79
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+GNL ++ ++ED F +G L+++W+AR PPG+AF+E++D RDA DA+R LDG
Sbjct: 12 KVYIGNLKSNANKYEIEDLFTKYGPLKNIWIARNPPGFAFIEYEDPRDAEDAVRGLDG 69
>gi|197210363|gb|ACH48189.1| alternative splicing factor SRp20/9G8 [Haplopelma schmidti]
Length = 139
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+ ++VG L+ + + DLE EF FG L VWVAR PPG+AF+EFDD DA +AIR ++G
Sbjct: 4 TSIFVGGLNDSIDKEDLEREFSKFGKLNHVWVARNPPGFAFIEFDDDEDANEAIREMNGA 63
Query: 62 --NG--WRVELSHNS 72
NG RV++S N+
Sbjct: 64 TINGSEIRVDMSRNN 78
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVG+L P V + DLE EF FG + +W+AR PPG+AF+EFD +DA A+R+LDG
Sbjct: 3 ASRIYVGDLRPDVRKEDLEKEFGKFGRVVDIWIARNPPGFAFLEFDSPKDADVAVRSLDG 62
Query: 61 K----NGWRVELS 69
K + RVE+S
Sbjct: 63 KSVCGSRVRVEIS 75
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVE++D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKVFSKYGSIRNVWVARNPPGFAFVEYEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+RV+VG L +++ +LE EF +G L VWVA+ PPG+AFVEFDD RDA +AIR ++G
Sbjct: 76 QTRVFVGGLGDNMAKEELEREFSKYGHLSQVWVAQNPPGFAFVEFDDDRDANEAIRQMNG 135
Query: 61 --KNGWRVELSHNSKGG 75
NG ++ + H+ + G
Sbjct: 136 FVLNGCKLRVEHSRERG 152
>gi|296224036|ref|XP_002757876.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Callithrix jacchus]
Length = 163
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL S+ +LE F + LRSVWVAR PPG+AFVEF+D RDA DA++ LDG+
Sbjct: 11 KVYVGNLGNNGSKTELERAFGYYRPLRSVWVARNPPGFAFVEFEDSRDAADAVQELDGRT 70
Query: 63 GW----RVELSHNSK 73
+VELS+ K
Sbjct: 71 VCSCRVKVELSNGEK 85
>gi|156350420|ref|XP_001622275.1| hypothetical protein NEMVEDRAFT_v1g141804 [Nematostella
vectensis]
gi|156208771|gb|EDO30175.1| predicted protein [Nematostella vectensis]
Length = 98
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+++YVGNL +LE F FG L VWVAR PPG+AFVE++D RDA +A+R LDG
Sbjct: 2 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 61
Query: 61 KN----GWRVELSHN 71
N RVE S+N
Sbjct: 62 ANVCDRTIRVEFSNN 76
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|351697385|gb|EHB00304.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
Length = 87
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL ++ +L+ F +G LRSVWVAR PPG+AFVEF+D R + DA+R LDG+
Sbjct: 11 KVYVGNLGNNGNKTELDRAFGYYGPLRSVWVARNPPGFAFVEFEDPRASADAVRELDGRT 70
Query: 63 GW----RVELSHNSK 73
RVELS+ K
Sbjct: 71 SCGCRVRVELSNGEK 85
>gi|157417688|gb|ABV54791.1| RNA-binding 1-like protein [Ilyanassa obsoleta]
Length = 149
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVG L ++++LE +F +G L++VWVAR+P G+AFVEFDD RDA DA+RALDG
Sbjct: 12 KVYVGELGHGCAKQELEXKFGKYGSLKNVWVARQPAGFAFVEFDDPRDAEDAVRALDGTR 71
Query: 62 -NGWRVELSHNS 72
NG RV + ++
Sbjct: 72 INGRRVRVEMST 83
>gi|291228272|ref|XP_002734102.1| PREDICTED: transformer-2 sex-determining protein, putative-like
[Saccoglossus kowalevskii]
Length = 204
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVG+L ++ +LE F +G LR+VWVAR PPG+AFVEF+D RDA D++R LDG+
Sbjct: 13 KVYVGDLGSGAAKHELERAFSHYGPLRNVWVARNPPGFAFVEFEDPRDASDSVRGLDGR 71
>gi|340368163|ref|XP_003382622.1| PREDICTED: hypothetical protein LOC100636732 [Amphimedon
queenslandica]
Length = 172
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + LE EF FG L+SVWVAR PPG+AFVEF+D RDA +AIR LDGK
Sbjct: 3 TKVYVGELGENGDKGVLEREFERFGTLKSVWVARNPPGFAFVEFEDPRDAEEAIRELDGK 62
>gi|313242504|emb|CBY34644.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 2 SRVYVGNL---DPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRAL 58
S+VY+GNL P +E +E E +G L SVW+ARRPPG+ +VEF+D RDA DAIR L
Sbjct: 10 SKVYLGNLGSHPPSTAE--VEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDL 67
Query: 59 DGKNGW----RVELSH 70
DG+ + +VELSH
Sbjct: 68 DGRTVFGRRLKVELSH 83
>gi|313226285|emb|CBY21429.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 2 SRVYVGNL---DPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRAL 58
S+VY+GNL P +E +E E +G L SVW+ARRPPG+ +VEF+D RDA DAIR L
Sbjct: 10 SKVYLGNLGSHPPSTAE--VEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDL 67
Query: 59 DGKNGW----RVELSH 70
DG+ + +VELSH
Sbjct: 68 DGRTVFGRRLKVELSH 83
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
RVYVG L +R+LE EF FG L+ VWVAR+PPG+AF+EF++ DA DA+R LDG+
Sbjct: 6 RVYVGGLPDDADKRELEAEFSKFGRLQDVWVARKPPGFAFIEFENDMDARDAVRELDGRE 65
Query: 62 ---NGWRVELS 69
N RVE++
Sbjct: 66 LCGNRVRVEIA 76
>gi|407262172|ref|XP_003946018.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
gi|407264079|ref|XP_003945604.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
Length = 157
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGN ++ +LE F +G LR+VWVAR PPG+AFVEF+D RD DA+R LDG+
Sbjct: 11 KVYVGNRGNNGNKTELERAFGYYGPLRNVWVARNPPGFAFVEFEDPRDDADAVRELDGRA 70
Query: 63 ----GWRVELSHNSKGGGGRG 79
RVELS++ K RG
Sbjct: 71 LCGCCVRVELSNDEKRSRNRG 91
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L + ++LE+ F +G +R VW+ARRPPG+AF+EF+D RDA DA++AL+G
Sbjct: 16 KVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGAR 75
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 76 ICGVRPRVEISH 87
>gi|405965541|gb|EKC30907.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 280
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
RV+V +L S+RDLE F FG L VWVAR PP +AF+ + R DA A+R +DGK
Sbjct: 35 RVHVADLGIDPSKRDLERAFEKFGPLIEVWVARNPPCFAFIVYKYREDAEKALREMDGKP 94
Query: 62 -NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+G R+ S G R RG +L+CY CGE GHF+R+C
Sbjct: 95 LSGGRIRCSLARPRTR--GRRRRGFDPNLRCYTCGEKGHFSRDC 136
>gi|358253767|dbj|GAA53754.1| RNA-binding protein 1, partial [Clonorchis sinensis]
Length = 1238
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFIGGVDPRVGKVDIEREFDRFGPIADVWVARNPPGFAFIVFKYADDADRAVRRMDGSR 71
Query: 63 --GWRVELSH---NSKGGGG 77
G R+ + H SK GG
Sbjct: 72 PFGSRLRVEHAVNTSKTNGG 91
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L S +LE+ F +G ++ VW+ARRPPG+AFVEF+D RDA DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+VYVGNL S+ ++E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL S+ +LE F +G LR+VWVAR PPG+AF+EF+D RDA DA+R LDG
Sbjct: 12 KVYVGNLGNNGSKYELECIFSKYGPLRNVWVARNPPGFAFIEFEDPRDAEDAVRGLDG 69
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VY+GNL ++ ++E F +G L++ W+AR PPG+AFVEF+D RDA DA+R LDG
Sbjct: 11 KVYIGNLGQNGTKHEIEASFTKYGPLKNTWIARNPPGFAFVEFEDPRDAEDAVRGLDGTR 70
Query: 63 ----GWRVELSHN 71
RVE+S N
Sbjct: 71 ICGVRVRVEMSSN 83
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii
yoelii]
Length = 309
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR FG + V + G +AF+EF+D RDA DAI+
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGGGRGGRGRG 84
D G N RVE+ N++ G RGRG
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYNSRGRG 96
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L S +LE+ F +G ++ VW+ARRPPG+AF+EF+D RDA DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 77/166 (46%), Gaps = 35/166 (21%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + R YAFVEF D RDA DA LDGK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARHYLDGK 67
Query: 62 --NGWR--VELSHNSKGGG----GRG---GRGR---------------GGGEDLKCYECG 95
+G R VE + G GRG G GR G KCY CG
Sbjct: 68 EFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 127
Query: 96 EPGHFARECR------LRIGSRGLGSGRRRSPSPRRRRSPSYGYGR 135
E GH R C+ R S GR RSP R RSPSY GR
Sbjct: 128 ERGHIERNCKNSPKKLTRGKSYSRSPGRSRSPHRGRSRSPSYSRGR 173
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L S +LE+ F +G ++ VW+ARRPPG+AF+EF+D RDA DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L S +LE+ F +G ++ VW+ARRPPG+AFVEF+D RDA DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR FG + V + G +AF+EF+D RDA DAI+
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGGGRGGRGRG 84
D G N RVE+ N++ G RGRG
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYNSRGRG 96
>gi|242022186|ref|XP_002431522.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516816|gb|EEB18784.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 150
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R++V +L VS+ +L F +G L+ VWVA PP +AFV F++R DA +AI+ +D +
Sbjct: 37 RLHVADLGQGVSKGELTRVFEKYGPLKEVWVASSPPCFAFVVFENREDAEEAIQGVDNTS 96
Query: 63 --GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G RV +S GRG + + +CY CGE GHF+R+C
Sbjct: 97 VGGNRVRVSVARPRTRGRGLKSYDPNQ--RCYTCGERGHFSRDC 138
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+V+VG L + ++LE+ F +G +R VW+ARRPPG+AF+EF+D RDA DA++AL+G
Sbjct: 11 KVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGAR 70
Query: 63 ----GWRVELSH 70
RVE+SH
Sbjct: 71 ICGVRPRVEISH 82
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVWVA PPG+AF+EF+++ +A A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQ 66
Query: 62 N----GWRVELSH---NSKGG 75
+ RVE+S N +GG
Sbjct: 67 DILGSKLRVEISKGRRNPRGG 87
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+GNL ++ ++E EF +G L+ VW+AR PPG+AFV FDD DA DA+ ALDG+
Sbjct: 5 TRVYIGNLGSGAAKHEIEKEFARYGPLKDVWIARNPPGFAFVVFDDPLDAQDAVEALDGR 64
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVWVA PPG+AF+EF+++ +A A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQ 66
Query: 62 N----GWRVELSH 70
+ RVE+S
Sbjct: 67 DILGSKLRVEISK 79
>gi|260826884|ref|XP_002608395.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
gi|229293746|gb|EEN64405.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
Length = 92
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVG+L ++ +LE F FG LR+VWVAR P G+AFVEF+D RDA DA+ ALDG+
Sbjct: 5 KVYVGDLGQSGTKHELERAFGAFGPLRNVWVARNPAGFAFVEFEDPRDARDAVDALDGRY 64
Query: 63 --GWR--VELSHNSK 73
G R VE+SH K
Sbjct: 65 ICGRRVLVEMSHGKK 79
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + LE+EF FG L SVW+A PPG+AF+EF ++ +A+ A +L+G+
Sbjct: 7 TRVYVGNLTDKVKKEQLEEEFTRFGKLNSVWLAHNPPGFAFIEFANKDEAISACDSLNGQ 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSKLRVEIS 78
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 80/167 (47%), Gaps = 36/167 (21%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + R YAFVEF D RDA DA LDGK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARHYLDGK 67
Query: 62 --NGWR--VELSHNSKGGG----GRG---GRGR---------------GGGEDLKCYECG 95
+G R VE + G GRG G GR G KCY CG
Sbjct: 68 DFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 127
Query: 96 EPGHFARECR---LRIGSRGLGSGRR--RSPSPR--RRRSPSYGYGR 135
E GH R C+ ++ RG R RSPSP R RSPSY GR
Sbjct: 128 ERGHIERNCKNSPKKLTKRGRSYSRSPDRSPSPHRGRSRSPSYSRGR 174
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR FG + V + G +AF+EF+D RDA DAI+
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGGGRGGRGRG 84
D G N RVE+ N++ G RGRG
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYSSRGRG 96
>gi|358335617|dbj|GAA32504.2| serine/arginine-rich splicing factor 7, partial [Clonorchis
sinensis]
Length = 145
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 18/115 (15%)
Query: 13 VSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG------------ 60
S+R++E FR +G L++VWVAR PPG+AFVEF+D DA +A+R LDG
Sbjct: 2 ASDREIERIFRDYGRLKNVWVARNPPGFAFVEFEDLADAQEAVRELDGTVMCGVRARVEL 61
Query: 61 ------KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIG 109
+ W + G G RGR +CYECGE GH+A +CR R G
Sbjct: 62 SSGKSRQKPWLRGGVRDGGGRDFGGRRGRPFDPSDRCYECGERGHYAYDCRRRNG 116
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|344241848|gb|EGV97951.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 131
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN- 62
VYVGN+ ++ +LE F +G L SVWVA+ PP +AFVEF+D RDA DA++ L+G+
Sbjct: 12 VYVGNIGINGNKTELEHAFCYYGPLPSVWVAQNPPDFAFVEFEDPRDAADAVQELNGRTL 71
Query: 63 ---GWRVELSHNSKGGGGRG 79
RVE+S+ K G RG
Sbjct: 72 CGCRVRVEVSNGEKRSGNRG 91
>gi|156350426|ref|XP_001622278.1| predicted protein [Nematostella vectensis]
gi|156208774|gb|EDO30178.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++V+VGNL +L + F+ +G LR VWVAR PPG+AFVEF D RDA DA+ ALDG
Sbjct: 3 TTKVWVGNLGKEGDRHELWEAFKSYGELRDVWVARNPPGFAFVEFYDARDARDAVDALDG 62
Query: 61 K----NGWRVELSH 70
+ +VELSH
Sbjct: 63 ERICGQRVKVELSH 76
>gi|428672140|gb|EKX73055.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 158
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+YVGNL+ + ++ F FG+L +VWVARRPPG+AFV F+D RDA DAI L+G+
Sbjct: 12 RLYVGNLNEDTTTDQIDSLFSRFGILTNVWVARRPPGFAFVTFEDPRDASDAIAELNGRE 71
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVWVA PPG+AF+EF+++ +A A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKDEAETACDNLNGQ 66
Query: 62 N----GWRVELS 69
+ RVE+S
Sbjct: 67 DILGSKLRVEIS 78
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL ++ + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGT 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|47028307|gb|AAT09086.1| splicing factor [Bigelowiella natans]
Length = 194
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVGNLD +RDLED FR G + + W+AR PPG+ FV F+D DA DAI+ LDG+
Sbjct: 11 TKVYVGNLDRSTDKRDLEDFFRDSGKIVATWIARNPPGFGFVTFEDPYDAKDAIKDLDGR 70
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|158299891|ref|XP_319902.4| AGAP009142-PA [Anopheles gambiae str. PEST]
gi|157013736|gb|EAA43387.4| AGAP009142-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL +V + DLE EF +G L SVWVA PPG+AF+EF+++ +A A L+G+
Sbjct: 10 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNGQ 69
Query: 62 N----GWRVELSH 70
+ RVE+S
Sbjct: 70 DILGSKLRVEISK 82
>gi|399218813|emb|CCF75700.1| unnamed protein product [Babesia microti strain RI]
Length = 117
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 7 GNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK----N 62
GNL+P + LE F FG + ++WVARRPPG+AFV F+D RDA DA+ L+ N
Sbjct: 22 GNLNPNTTSEQLEGIFAKFGTIATIWVARRPPGFAFVTFEDHRDAHDAVEELNRTEFQGN 81
Query: 63 GWRVELS 69
+VELS
Sbjct: 82 SLKVELS 88
>gi|56757157|gb|AAW26750.1| unknown [Schistosoma japonicum]
Length = 131
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSKGGGG-RGGRGRGGGEDLKCYECGEP 97
+ RVE + N+K GGR R + P
Sbjct: 72 PFGSRLRVEHAVNNKTANRLPGGRCRNISPEAAHVHLAHP 111
>gi|321456059|gb|EFX67176.1| hypothetical protein DAPPUDRAFT_18244 [Daphnia pulex]
Length = 79
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 11/86 (12%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RVYVG++ V + DLE EF +G L S WVA PPG+AF+EF+D DA +A+ +++G +
Sbjct: 1 RVYVGSILENVKKEDLEVEFGKYGKLTSAWVAFNPPGFAFIEFEDESDAQEAVASMNGTD 60
Query: 63 ----GWRVELSHNSKGGGGRGGRGRG 84
RVE+S N GRGRG
Sbjct: 61 FMGSKIRVEISPNR-------GRGRG 79
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVGNL ++ + DLE EF +G L SVW+A PPG+AFVEF+ R DA A L+G
Sbjct: 7 TRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGT 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|259089273|ref|NP_001158674.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
gi|225705750|gb|ACO08721.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
Length = 89
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRAL 58
+VYVGNL + +LE F +G LRSVWVAR PPG+AFVEF+D RDA DA++ L
Sbjct: 10 KVYVGNLGNNGDKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVKEL 65
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 71/151 (47%), Gaps = 35/151 (23%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
++YVGN+ + RDLED F +G +R V + YAFVE D RDA DA LDGK
Sbjct: 5 KLYVGNVSRHATRRDLEDLFSKYGRVRDVRLLS---DYAFVEMGDERDAEDARYYLDGKR 61
Query: 62 ---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR--------LRIGS 110
RVE + N R KCY CG GHFAREC R G
Sbjct: 62 LEGERIRVEFAKNE----------RAPPRQPKCYNCGLLGHFARECPNGDWSNRCYRCGE 111
Query: 111 RG-----LGSGRRRSPSP-----RRRRSPSY 131
+G + R R+PSP RR+RSP +
Sbjct: 112 KGHTQKDCTAPRPRTPSPSGLPSRRKRSPRH 142
>gi|449672680|ref|XP_004207768.1| PREDICTED: uncharacterized protein LOC100212585 isoform 2 [Hydra
magnipapillata]
Length = 179
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L + +LE EF G +R +WVAR PPG+ F+ F+D RDA DA+R +DG
Sbjct: 1 MSRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDG 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L + R+++D F +G + ++WVAR PPG+AFV+F+D RDA DAIR++DG+
Sbjct: 3 TRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 62 NGW----RVELS 69
+ RVEL+
Sbjct: 63 DFLGGRIRVELA 74
>gi|405965540|gb|EKC30906.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 70
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++YVG+L E+DLE F +G LR+VWVAR P G+AFVE++D RDA DA+R +DG
Sbjct: 12 KIYVGDLSRDACEKDLERAFEYYGRLRNVWVARNPAGFAFVEYEDPRDADDAVRGMDG 69
>gi|443698345|gb|ELT98383.1| hypothetical protein CAPTEDRAFT_123867, partial [Capitella
teleta]
Length = 88
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++YVG+L V++ DLE EFR +G ++ VWVAR PPG+AF+EF +D A+R+++GK
Sbjct: 1 KLYVGDLLESVTKDDLEKEFRQYGRIKEVWVARNPPGFAFIEFAHEKDIRSAVRSMNGK 59
>gi|427796305|gb|JAA63604.1| Putative alternative splicing factor srp20/9g8 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 188
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+R++VG L +++ DLE EF +G L VWVA+ PPG+AF+EFDD RDA +AIR ++G
Sbjct: 7 QTRIFVGGLGDNMAKDDLEREFGKYGRLNQVWVAQNPPGFAFLEFDDDRDADEAIRNMNG 66
Query: 61 K--NGWRVELSH 70
NG R+ + +
Sbjct: 67 VVLNGSRLRVEY 78
>gi|391347503|ref|XP_003748000.1| PREDICTED: uncharacterized protein LOC100899663, partial
[Metaseiulus occidentalis]
Length = 166
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R++VG ++ + + DLE F +G L +VWVA+ PPG+AFV+FDD ++A DA+ +DG+
Sbjct: 37 NRIFVGGINESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQ 96
Query: 62 --NGWRVELS 69
NG ++++
Sbjct: 97 ELNGMTLKVA 106
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR FG + V + G +AF+EF+D RDA DAI+
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGGG 77
D G N RVE+ N++ G
Sbjct: 67 DGCDFGGNKLRVEVPFNARANGN 89
>gi|391348702|ref|XP_003748583.1| PREDICTED: uncharacterized protein LOC100904296 [Metaseiulus
occidentalis]
Length = 236
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R++VG L + + DLE EF +G L VWVA+ PPG+AF+EFDD RDA +A ++G
Sbjct: 74 NRIFVGGLTDGIVKEDLEREFSKYGKLNHVWVAQNPPGFAFIEFDDERDASEACNEMNGA 133
Query: 62 N 62
N
Sbjct: 134 N 134
>gi|76162112|gb|AAX30173.2| SJCHGC01414 protein [Schistosoma japonicum]
Length = 97
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 19 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 78
Query: 63 GW----RVELSHNSK 73
+ RVE + N+K
Sbjct: 79 PFGSRLRVEHAVNNK 93
>gi|112983080|ref|NP_001037670.1| repressor splicing factor 1 [Bombyx mori]
gi|95115206|gb|ABF55969.1| Rsf1 [Bombyx mori]
Length = 143
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+RVYVG L + + DLE EF +G L SVWVA PPG+AF+EF++ ++A DA A++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFAKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 64
>gi|226486670|emb|CAX74412.1| RNA-binding protein 1 [Schistosoma japonicum]
gi|226486672|emb|CAX74413.1| RNA-binding protein 1 [Schistosoma japonicum]
Length = 90
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSK 73
+ RVE + N+K
Sbjct: 72 PFGSRLRVEHAVNNK 86
>gi|256084273|ref|XP_002578355.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045236|emb|CCD82784.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 298
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSK 73
+ RVE + N+K
Sbjct: 72 PFGSRLRVEHAVNNK 86
>gi|256084271|ref|XP_002578354.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045235|emb|CCD82783.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 301
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSK 73
+ RVE + N+K
Sbjct: 72 PFGSRLRVEHAVNNK 86
>gi|318087272|gb|ADV40228.1| putative alternative splicing factor SRp20/9G8 [Latrodectus
hesperus]
Length = 165
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+ +YVG L V + DLE EF +G L VWVAR PPG+AF+EF+D +DA +AI+ ++G
Sbjct: 4 TSLYVGGLGEDVQKEDLEREFGKYGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNG 62
>gi|328711080|ref|XP_003244442.1| PREDICTED: hypothetical protein LOC100575791 [Acyrthosiphon pisum]
Length = 164
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R++V ++ ++ RD+E EF +G L VW++R P +AFV + +DA +A + +G
Sbjct: 51 RLHVRDIGSSITRRDIEKEFERYGTLLEVWMSRTRPSFAFVVYKRDKDAAEAQKRTNGME 110
Query: 63 GWRVELS---HNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ L+ ++G R R + L+CY C GHF+R C+
Sbjct: 111 LYGSFLTVSFAKTRGLSRRSSRNNSYRDSLRCYSCNRVGHFSRSCK 156
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 69/153 (45%), Gaps = 29/153 (18%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + R YAFVEF D RDA DA LDGK
Sbjct: 11 TRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARYHLDGK 67
Query: 62 N----------------GWRVELSHNSKGGGGR----GGRG------RGGGEDLKCYECG 95
+ G R L G GR G G + G KCY CG
Sbjct: 68 DLDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 127
Query: 96 EPGHFARECRLRIGSRGLGSGRRRSPSPRRRRS 128
E GH R C+ G RSPSPRR RS
Sbjct: 128 ERGHIERNCKNSPKKLKRGRSYSRSPSPRRGRS 160
>gi|391348700|ref|XP_003748582.1| PREDICTED: uncharacterized protein LOC100904155 [Metaseiulus
occidentalis]
Length = 531
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R++VG + + + DLE F +G L +VWVA+ PPG+AFV+FDD ++A DA+ +DG+
Sbjct: 46 NRIFVGGISESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQ 105
Query: 62 --NGWRVELS 69
NG ++++
Sbjct: 106 ELNGMTLKVA 115
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F FG + + + RR P +AFVEFDD RDA DA++A DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVQARDGY 68
Query: 61 -KNGW--RVELSHNSKGGGGRGGRGRGGG 86
+G+ RVE S G G G GRG G
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRG 97
>gi|224109824|ref|XP_002315325.1| predicted protein [Populus trichocarpa]
gi|222864365|gb|EEF01496.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S +YV NLD ++ DL F FG + V V R+ G AF++F R DAV A+
Sbjct: 9 STLYVSNLDFSLTNSDLHTLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAVE 68
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFAREC-RLRIGSR 111
+D K LS + GR + R + KCYECGE GH + EC R R+G R
Sbjct: 69 QMDKKILNGRTLSASIAADNGRAAEFIKKRVYKDKSKCYECGEDGHLSYECPRNRLGIR 127
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
++YV N R +E DL+ EF+ +G + + + R YAF+ +DD A DAIR +D
Sbjct: 7 QIYVTNFSSRTNEEDLQYEFKKYGSIVDINMKR---SYAFITYDDYHSAEDAIRKMDKAV 63
Query: 62 -NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLR 107
NG ++ + + G + R RG D KC++CG GH+A EC R
Sbjct: 64 INGKQILV----EPAGLKKIRPRGPQLDDKCFKCGRRGHWANECDER 106
>gi|226469178|emb|CAX70068.1| Serine/arginine repetitive matrix protein 2 [Schistosoma
japonicum]
Length = 298
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG +DPRV + D+E EF FG + VWVAR PPG+AF+ F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSK 73
+ RVE + N+K
Sbjct: 72 PFGSRLRVEHAVNNK 86
>gi|389608769|dbj|BAM17996.1| repressor splicing factor 1 [Papilio xuthus]
Length = 158
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+RVYVG L + + DLE EF +G L SVWVA PPG+AF+EF++ ++A DA A++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNG 64
>gi|242025305|ref|XP_002433066.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212518582|gb|EEB20328.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 216
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+RVYVG L + DLE EF FG L +VWVA PPG+AF+EF ++ DA +A +++G
Sbjct: 18 TRVYVGGLSQGTKKEDLESEFEKFGKLNNVWVAFNPPGFAFIEFSNKTDAENACDSMNG 76
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma
variegatum]
Length = 222
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F FG + + + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 61 -KNGW--RVELSHNSKGGGGRGGRGRGGG 86
+G+ RVE S G G G GRG G
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRG 97
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F FG + + + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 61 -KNGW--RVELSHNSKGGGGRGGRGRGGG 86
+G+ RVE S G G G GRG G
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRG 97
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVG + P +DLED FR +G LR+V + R + FVEF D RDA DA LDG+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGR 146
Query: 62 ----NGWRVELSHNS-KGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ VE + + +G GG G+G +CY CG GH+ R+C+
Sbjct: 147 IFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPGRCYNCGMDGHWVRDCK 195
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|375073655|gb|AFA34386.1| Rbp-1 RNA binding protein 1 isoform A, partial [Ostrea edulis]
Length = 123
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 6 VGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK--NG 63
+G+L ++ +LED F +G +R+VWVAR PPG+AFVEF D RD DA +ALDG NG
Sbjct: 1 IGDLGYGAAKYELEDVFSRYGPIRNVWVARNPPGFAFVEFQDTRDVEDATKALDGTRING 60
Query: 64 WRVELSHNS 72
RV + +S
Sbjct: 61 RRVRVEMSS 69
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 11 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 70
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 71 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 104
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L PR RDLE F +G +R V + R YAF+EF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPRDADDAQYNLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRI-IVEFAKGVPRGSGGSRDYNGRGPPPGTGRCFNCGVDGHWARDCQA 119
>gi|241671849|ref|XP_002411428.1| RSZp21 protein, putative [Ixodes scapularis]
gi|215504077|gb|EEC13571.1| RSZp21 protein, putative [Ixodes scapularis]
Length = 222
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R++VG LD ++ DLE EF +G L+ VW+A+ PPG+AFVEF+D +A+R ++G
Sbjct: 19 ARIFVGGLDCIMTREDLEREFGKYGQLKEVWMAQNPPGFAFVEFEDNSRVDEAVREMNGT 78
Query: 62 --NG--WRVELSHNS------KGGGGRGGRGR 83
NG RVE + + +GGG RGR
Sbjct: 79 IVNGALLRVERARDKARTRTPRGGGASSFRGR 110
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL VS RD+E+EFR +G + V + G +AF+EF+D RDA DAI+
Sbjct: 7 ISRIYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 DGK----NGWRVELSHNSKGGG 76
DG N RVE+ N++ G
Sbjct: 67 DGSDYGGNKLRVEVPFNARDNG 88
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++VYVGNL E DL+D F+ FGV++S+ + GY FV FD R+ A +A + +G
Sbjct: 47 ANKVYVGNLPDDTREADLQDCFKEFGVIKSIELKT---GYGFVAFDSRQAAEEAAKTYNG 103
Query: 61 ----KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIG 109
N RV +H + G + G C++CG GH+AREC G
Sbjct: 104 GSFLGNTIRVAPAHGTNKTGSKSLVEPGA-----CFKCGNHGHWARECPHHQG 151
>gi|357620751|gb|EHJ72823.1| repressor splicing factor 1 [Danaus plexippus]
Length = 151
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+RVYVG L + + DLE EF +G L SVWVA PPG+AF+EF++ ++A DA A++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNG 64
>gi|281201086|gb|EFA75300.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 305
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 30/131 (22%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+YVG + R S +L+D F+ FG + S+ + GYAFVEF D + A DAI A++ +
Sbjct: 69 RIYVGRISTRTSREELQDNFKRFGEVLSMDIK---TGYAFVEFKDEKSANDAINAMNNTD 125
Query: 63 --GWRVELSHNSKGGGGRGG------RGRG------------------GGEDLKCYECGE 96
G R+ + S GG R RGRG G D+KCY C
Sbjct: 126 LDGERI-IVQKSHGGRKRTSDECYICRGRGHWARSCPRNNSSGSSGGRGSRDIKCYTCNG 184
Query: 97 PGHFARECRLR 107
GH ARECR R
Sbjct: 185 YGHIARECRGR 195
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDL+D F +G +R V + R YAFVEF D RDA DA +L+G+
Sbjct: 11 TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYSLNGR 67
Query: 62 N--GWRVELSHNSKG-----GGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVHGSRI-IVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCK 117
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKGGGGRGGRGRG-GGEDLKCYECGEPGHFARECRLRIGSRGLGS 115
N G+ RVEL+H GGRG+ E + Y G G +R R+ GL S
Sbjct: 69 NFDGYRLRVELAH--------GGRGQSYQYERPRSYSSGRRGGVSRRSEYRVLVDGLPS 119
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L PR RDLE F +G +R V + R YAF+EF D RDA DA LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPRDADDAQYNLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 EVDGSRI-IVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKA 119
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|209881965|ref|XP_002142420.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209558026|gb|EEA08071.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 241
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++V++G LDP ++ +LE EFR FGV+ +VWVAR PPG+ FV + + RDA +++ +DG
Sbjct: 8 TKVFIGQLDPWITPGELEREFRRFGVVDAVWVARNPPGFGFVTYANPRDAELSVQEMDG 66
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR +G + V + G +AF+EF+D RDA DAI+
Sbjct: 7 ISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGG 76
D G N RVE+ N++ G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNG 88
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSKGGGGR-------GGRGRGGGEDLKCYECGEPGHFARECRLRIGSRG 112
+G+R+ + GG GR G RGGG + G G AR + R+ G
Sbjct: 69 DYDGYRLRVEFPRGGGPGRYSSSSRGGNSDRGGG----ARDRGNRGPPARRSQFRVMVTG 124
Query: 113 L 113
L
Sbjct: 125 L 125
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSKGGGGRGGRGRGG 85
+G+R+ + S+N +GG G G GRGG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGG 103
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi
strain B]
Length = 316
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL V+ RD+E+EFR +G + V + G +AF+EF+D RDA DAI+
Sbjct: 7 ISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSKGGG 76
D G N RVE+ N++ G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNG 88
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALD 59
+RV+VGNL V ER++ED F +G +RSV + RPP +AFVEF+D RDA DA+R D
Sbjct: 4 TRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRD 63
Query: 60 G----KNGWRVELSH 70
G RVE+SH
Sbjct: 64 GIEFQGQRLRVEVSH 78
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|315024124|gb|ADT71646.1| arginine/serine-rich 3 splicing factor [Mesocricetus auratus]
Length = 122
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 22 FRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN----GWRVELSHNSKGGGG 77
F +G LRSVWVAR PPG+AFVEF+D RDA DA+R LDG+ RVELS+ K
Sbjct: 3 FGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRN 62
Query: 78 RG 79
RG
Sbjct: 63 RG 64
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPG+AFVEF+D RDA DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 ----NGWRVELSHNSKGGGGRGG 80
N RVEL+H GGRG
Sbjct: 135 NFDGNRLRVELAH-----GGRGN 152
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPG+AFVEF+D RDA DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 ----NGWRVELSHNSKGGGGRGG 80
N RVEL+H GGRG
Sbjct: 135 NFDGNRLRVELAH-----GGRGN 152
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPG+AFVEF+D RDA DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 ----NGWRVELSHNSKGGGGRGG 80
N RVEL+H GGRG
Sbjct: 135 NFDGNRLRVELAH-----GGRGN 152
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGED-LKCYEC--GEPGHFARECRLRIGSRGLG 114
N RVEL+H GGRG+ D Y G G +R R+ GL
Sbjct: 69 NFDGNRLRVELAH--------GGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120
Query: 115 S 115
S
Sbjct: 121 S 121
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
++VYV L R E DL+D F FG ++ + + YAF+++++ DAV A+R ++G
Sbjct: 93 FTQVYVAGLHRRTREDDLKDSFSKFGRIKQLVLKH---NYAFIDYENHEDAVAALREMNG 149
Query: 61 K---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
K NG + + + GG R G + CY C +PGH+A EC
Sbjct: 150 KTFVNGEELAVEQSVPGGKKRKS---GPKREDVCYNCQKPGHWANEC 193
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R++VG++ RV + DLE EF +G + VWVAR PPG+AFV + R DA A+R+LDG+
Sbjct: 13 RLFVGDIGTRVGKNDLEREFDRYGPITDVWVARNPPGFAFVVYMYREDADKAVRSLDGRL 72
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 73 MCGRRVRVEH 82
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 35/143 (24%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIRA 57
R ++GNL ++ L+D FR FG + V + R G+AFV FD+++D AI
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 58 LDG---------------------KNGWRV----ELSHNSKG---GGGRGGRGRGGGEDL 89
++G +NG R S N +G GGGR RG GGG D
Sbjct: 68 MNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRNDRGRDSGGGRAPRGSGGGGD- 126
Query: 90 KCYECGEPGHFARECRLRIGSRG 112
C++CG+PGHFAREC G RG
Sbjct: 127 -CFKCGKPGHFARECPDGDGGRG 148
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSKGGGG--RGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGS 115
+G+R+ + GG G RG R + + + G AR + R+ GL S
Sbjct: 69 DYDGYRLRVEFPRGGGPGSYRGSRQGNSDRNSRGGDRNNRGPPARRSQFRVMVTGLPS 126
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+G ++ + +LE F +G + +VWVAR PPG+AF+ FDD RDA DA+ LDG
Sbjct: 8 KVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 65
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VY+G ++ + +LE F +G + +VWVAR PPG+AF+ FDD RDA DA+ LDG
Sbjct: 13 KVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 70
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI+ DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L V + DLE EF +G L SVWVA PPG+AF+EF + DA A +L+G
Sbjct: 9 ARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSLNGT 68
Query: 62 N----GWRVELS 69
+ RVE++
Sbjct: 69 DFLGSKLRVEIA 80
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDGK 61
RVYVGNL P V E+D+ED F +G +R V + RR P +AFVEF+DRRDA D++ +G
Sbjct: 10 RVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAEDSVHGRNGY 69
Query: 62 N--GWRVELSH 70
N G+++ + H
Sbjct: 70 NFDGYKLRVEH 80
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G V + V RPPGYAFVEFDD RDA DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|146179448|ref|XP_001020597.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila]
gi|146144570|gb|EAS00352.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila
SB210]
Length = 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK-- 61
++VG L RV E DL DEFR +G +R + RR G+AF+E+ DA A+ +DG+
Sbjct: 13 IFVGKLSSRVREEDLRDEFRRYGRIRDIDF-RRQRGFAFIEYSSSSDAKQAVEDMDGQRF 71
Query: 62 NGWRVELSHNSKGGGGRGGRGRGGGEDLK-CYECGEPGHFARECR 105
R+ + + R R R G CY CG GH+A EC+
Sbjct: 72 EDTRIVVQYKE----NRSDRNRRGPSTADVCYNCGRKGHWANECK 112
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRAL 58
+SR+YVGNL VS RD+E+EFR +G + V + G +AF+EF+D RDA DAI+
Sbjct: 7 VSRIYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 DG----KNGWRVELSHNSKGGG 76
DG N RVE+ N++ G
Sbjct: 67 DGCDFEGNKLRVEVPFNARENG 88
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVG + P +DLED FR +G LR+V + R + FVEF D RDA DA LDG+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGR 146
Query: 62 ----NGWRVELSHNSK-GGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRI 108
+ VE + ++ G GG G+G +CY CG GH+A E L +
Sbjct: 147 IFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPGRCYNCGMDGHWAWEELLEV 198
>gi|71027201|ref|XP_763244.1| splicing factor [Theileria parva strain Muguga]
gi|68350197|gb|EAN30961.1| splicing factor, putative [Theileria parva]
Length = 132
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+++VGNL V+ +DL+ F +G + +VWVAR PPG+ FV FDD RDA DA+ L+GK
Sbjct: 12 KLFVGNLVDSVTSQDLDLLFSKYGKVTNVWVARNPPGFGFVTFDDPRDAKDALIELNGKD 71
Query: 62 ---NGWRVE 67
N R+E
Sbjct: 72 LHGNSLRIE 80
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPG+AFVEF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 62 ----NGWRVELSHNSKGGGGRGG 80
N RVEL+H GGRG
Sbjct: 69 NFDGNRLRVELAH-----GGRGN 86
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella
moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella
moellendorffii]
Length = 298
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 15/92 (16%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V ER+++D F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 8 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 67
Query: 62 N--GW--RVELSHNSKGG---------GGRGG 80
N G+ RVE++H +G GGRGG
Sbjct: 68 NFDGYRLRVEIAHGGRGPPSSDRYSSYGGRGG 99
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
+ RVE +H GGRG +D
Sbjct: 69 DFDGHRLRVEPAH--------GGRGHSSSKD 91
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
+ RVE +H GGRG +D
Sbjct: 69 DFDGHRLRVEPAH--------GGRGHSSSKD 91
>gi|255577432|ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein, putative [Ricinus communis]
Length = 217
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NLD ++ DL F FG + V V +R+ G AF++F R DAV A +
Sbjct: 51 STVYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAK 110
Query: 57 ALDGK--NGWRVELSHNSKGG-GGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+D K NG + S S G + R + +CYECGE GH + EC
Sbjct: 111 QMDKKILNGRTLSASIASDNGRAAEFIKKRVYKDKSRCYECGEIGHLSYEC 161
>gi|313216549|emb|CBY37839.1| unnamed protein product [Oikopleura dioica]
gi|313217070|emb|CBY38254.1| unnamed protein product [Oikopleura dioica]
Length = 157
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
S++YVGNL + +LE F +G + SVWVARRP G+AFVE + +A DA+++LDG+
Sbjct: 9 SKIYVGNLGDYGDKAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGR 68
Query: 62 N--GWRVEL----SHNSKGGG-GRGGRGR 83
G RV + SH G RGGR R
Sbjct: 69 EICGQRVRVEMRKSHRRVGNADDRGGRSR 97
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
Length = 298
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V E +++D F +G + + + RPPGYAF+EFDD RDA DAI+A DG
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCY 92
+ RVE +H+ GGRG GG Y
Sbjct: 68 VFDGHRLRVEFAHS----GGRGHPSYGGDRHSNSY 98
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDG- 60
+YVGNL V ER++ED F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGY 68
Query: 61 ---KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYEC-GEPGHFARECRLRIGSRGLGS 115
N RVE++H GGRG D E G G +R R+ GL S
Sbjct: 69 NFDGNRLRVEIAH--------GGRGPPPAVDRSAAESGGRAGGVSRRSEYRVMVTGLPS 119
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella
moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella
moellendorffii]
Length = 236
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 15/92 (16%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V ER+++D F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 6 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 65
Query: 62 N--GW--RVELSHNSKGG---------GGRGG 80
N G+ RVE++H +G GGRGG
Sbjct: 66 NFDGYRLRVEIAHGGRGPPSSDRYSSYGGRGG 97
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPG+AFVEF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 62 ----NGWRVELSHNSKGGGGRGG 80
N RVEL+H GGRG
Sbjct: 69 NFDGNRLRVELAH-----GGRGN 86
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 15/120 (12%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI D
Sbjct: 198 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRY 257
Query: 62 N--GW--RVELSHNSKGGGGRGGRGRGGGED-LKCYECGEPGHFARECRLRIGSRGLGSG 116
N G+ RVEL+H GGRG+ D + Y G G +R R+ GL S
Sbjct: 258 NFDGYRLRVELAH--------GGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 309
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 N----GWRVELSHNSKGGGGRGG 80
+ RVE +H GGRG
Sbjct: 95 DFDGHRLRVEAAH-----GGRGN 112
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V ER++ED F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 62 ----NGWRVELSHNSKG 74
N RVE++H +G
Sbjct: 69 NFDGNRLRVEIAHGGRG 85
>gi|313233267|emb|CBY24382.1| unnamed protein product [Oikopleura dioica]
Length = 167
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
S++YVGNL + +LE F +G + SVWVARRP G+AFVE + +A DA+++LDG+
Sbjct: 19 SKIYVGNLGDYGDKAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGR 78
Query: 62 N--GWRVEL----SHNSKGGG-GRGGRGR 83
G RV + SH G RGGR R
Sbjct: 79 EICGQRVRVEMRKSHRRVGNADDRGGRSR 107
>gi|308459496|ref|XP_003092067.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
gi|308254399|gb|EFO98351.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
Length = 116
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVGNL +E +L D F + G ++++W+A+RPPG+AFV F A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEEELHDVFSVMGPIKNIWIAKRPPGFAFVTFKRTVHAYDAVKYLNGK 76
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L PR RDLE F +G +R V + R YAF+EF + RDA +A LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKR---DYAFIEFSEHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEF-AKGVPRGPGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKA 119
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L PR RDLE F +G +R V + R YAF+EF D DA DA LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPHDADDAQYNLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 EVDGSRI-IVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 119
>gi|313231379|emb|CBY08494.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Query: 1 MSRVYVGNL--DPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRAL 58
S+VYVGNL DP + E DLE+EF+ +G ++ ++VAR PPG+A+++F R A A+R +
Sbjct: 2 TSKVYVGNLGSDP-LQESDLEEEFQDYGHIKEIFVARNPPGFAYIDFVSERSAKTAVREM 60
Query: 59 D------GKNGWRVELSHNSKGGGGR 78
G+ +VELS+ ++ R
Sbjct: 61 QSRRKICGRKRVKVELSNRARKKRDR 86
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + E+++ED F +G + + V RPPGYAFVEF+D DA DAIR DG
Sbjct: 9 VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
+ RVEL+H GGRG D
Sbjct: 69 DFDGHRLRVELAH--------GGRGHSSSND 91
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+YVG R E+DLE+ F+ FG + S+ + G+AFVEFD+ + A AI +DGK
Sbjct: 61 RIYVGKFSSRTGEKDLEETFKKFGKILSLDMK---AGFAFVEFDNEKSANQAIDEMDGKE 117
Query: 62 -NGWR--VELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+G + V+ SH GGR R E CY C GH+AR C
Sbjct: 118 VDGEKLIVQKSH--------GGRKRSSDE---CYLCRGRGHWARNC 152
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
V+VGNL V ER++ED F +G +RSV + RPP +AFVEF+D+RDA DA+R DG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 62 ----NGWRVELSH 70
RVE+SH
Sbjct: 61 EFQGQRLRVEISH 73
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L PR RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEF-AKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 119
>gi|308459492|ref|XP_003092065.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
gi|308254397|gb|EFO98349.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
Length = 112
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVGNL +E++L D F + G ++++W+A+RPPG+AFV F A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEQELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNGK 76
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
Length = 288
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V E +++D F +G + + + RPPGYAF+EFDD RDA DAI+A DG
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCY 92
+ RVE +H+ GGRG GG Y
Sbjct: 68 VFDGHRLRVEFAHS----GGRGHPSYGGDRHSNSY 98
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 N--GW--RVELSHNSKGGGGRG 79
N G+ RVEL+H GGRG
Sbjct: 72 NFDGYRLRVELAH-----GGRG 88
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta
CCMP2712]
Length = 258
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RVYVG+L RV ERDL+DEF FG +R + + + G+AFVE+D DA A+R +DG N
Sbjct: 6 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQ---GFAFVEYDHSEDAEYAVRKMDGVN 62
Query: 63 --GWR--VELSHNSKGGGGRGGRG 82
G R VE + + G RGG G
Sbjct: 63 LEGMRILVEFAKETPKRGPRGGSG 86
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVE +H +G
Sbjct: 69 DFDGHRLRVEPAHGGRG 85
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans
morsitans]
Length = 236
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 7 SRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 61 --KNGWRVELSHNSKGGGGRGGRGRGGGE 87
+G+R+ + +GGG R G E
Sbjct: 67 YDYDGYRLRVEF-PRGGGRNEHRNNRGNE 94
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 110 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 169
Query: 62 N----GWRVELSHNSKGGGGRGG 80
+ RVE +H GGRG
Sbjct: 170 DFDGHRLRVEAAH-----GGRGN 187
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVG+L RV ERDLE FR FG +R V + G+ FVEFDD RDA DA+ L+G
Sbjct: 1 MTRVYVGHLSYRVRERDLERFFRGFGKIREVLLKN---GFGFVEFDDYRDADDAVYELNG 57
Query: 61 K--NGWR--VELSHNS 72
+ +G R VEL+H +
Sbjct: 58 RELDGERVVVELAHGT 73
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 N--GW--RVELSHNSKGGGGRG 79
N G+ RVEL+H GGRG
Sbjct: 72 NFDGYRLRVELAH-----GGRG 88
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 N----GWRVELSHNSKGGGGRG 79
+ RVE +H GGRG
Sbjct: 95 DFDGHRLRVEAAH-----GGRG 111
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKR---DYAFIEFSDPRDAEEARYNLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ L +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRI-LVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 119
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVEL+H +G
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 19 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKR---DYAFIEFSDPRDAEEARYNLDGR 75
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ L +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 76 DVDGSRI-LVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 127
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWV---ARRPPGYAFVEFDDRRDAVDAIRALDG 60
VYVGNL V E+++ED F +G +R++ + +R P +AF++FDDRRDA +A+RA DG
Sbjct: 6 VYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|298706217|emb|CBJ29258.1| RNA-binding protein 1 [Ectocarpus siliculosus]
Length = 402
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+++GNL PRVS DLE + +G + ++WVA+ PPG+AF +F +R A D +R +DG
Sbjct: 8 IHIGNLHPRVSVADLEPKLIKYGTITNLWVAKNPPGFAFCDFQNRAMADDCVRGMDG 64
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAFVEF+D +DA DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 N----GWRVELSHNSKGGGGRG 79
+ RVE +H GGRG
Sbjct: 95 DFDGHRLRVEAAH-----GGRG 111
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + +R+++D F +G + V + RPPGYAFVEF+D RDA DAIR DG
Sbjct: 46 LYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAEDAIRGRDGY 105
Query: 62 N----GWRVELSH 70
N RVEL+H
Sbjct: 106 NFDGCRLRVELAH 118
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDGK 61
R+YVGNL P + +D+ED F +G +R + + +R P +AFVEFDD+RDA DA+R DG
Sbjct: 9 RIYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPPFAFVEFDDKRDAEDAVRGRDGY 68
Query: 62 N--GWRVELS 69
N G+R+ +
Sbjct: 69 NYDGYRLRVE 78
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSKGGGGRG 79
+ RVEL+H GGRG
Sbjct: 69 DFDGHRLRVELAH-----GGRG 85
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + ++KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRI-VVESAKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKA 119
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
+ RVEL+H GGRG
Sbjct: 69 DFDGHRLRVELAH-----GGRG 85
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDG- 60
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA DA DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 61 ---KNGWRVELSHNSKGGGG 77
N RVE +H +G GG
Sbjct: 69 NFDGNRLRVEPAHGGRGSGG 88
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVEL+H +G
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHHLRVELAH 81
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V ER++ED F +G + + + RPPGY F+EF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGY 68
Query: 62 ----NGWRVELSHNSKG 74
N RVE++H +G
Sbjct: 69 NFDGNRLRVEIAHGGRG 85
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWV---ARRPPGYAFVEFDDRRDAVDAIRALDG 60
VYVGNL V E+++ED F +G +R++ + +R P +AF++FDDRRDA +A+RA DG
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACDG 65
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N--GW--RVELSHNSKG 74
N G+ RVEL+H +G
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + V RPPG+AFVEF+D RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 62 N----GWRVELSH 70
N RVEL+H
Sbjct: 69 NFDGNRLRVELAH 81
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVE +H GGRG
Sbjct: 69 NFDGHRLRVEAAH-----GGRG 85
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+G L R SERD+E FR +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 3 ARVYIGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSKGGGGRG 79
+ G R+ L + +G GRG
Sbjct: 60 DLCGERIILEFSRRGPRGRG 79
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALD 59
+RVYVGNL + R++ED F +G +R + V RPP +AFV+F+D RDA DAIR D
Sbjct: 531 TRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRD 590
Query: 60 GKNGWRVELSHNSKGGGGRGGRGRGGG 86
G + L GG R RG G
Sbjct: 591 GYDYDGARLRVEPANGGRRESAPRGSG 617
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRAL 58
M +++VGNL +SE +LE F FG + +V + RRPP +AF+E++D RDA DA++ +
Sbjct: 24 MPKIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 59 DGKN----GWRVELSHN 71
GK RVE+S N
Sbjct: 84 HGKELHGAEIRVEISRN 100
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F FG + + + RPPGYAFVEF+D RDA DAIR DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGY 68
Query: 62 --NGW--RVELSHNSKGGGGRG 79
+G+ RVEL+H GGRG
Sbjct: 69 KFDGFRLRVELAH-----GGRG 85
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHNS 72
G RV L ++
Sbjct: 60 ELGGERVILDYSK 72
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
RV V NL R+S +DL+D+ R GV + A + P A + F D I DG
Sbjct: 126 RVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFASPTDLKRCIEKCDGMD 185
Query: 62 -NGWRVELSHNSKGGGG 77
NG ++++ +S+ G G
Sbjct: 186 LNGRKIKMIDDSQAGSG 202
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRAL 58
M +++VGNL +SE +LE F FG + +V + RRPP +AF+E++D RDA DA++ +
Sbjct: 24 MPKIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 59 DGKN----GWRVELSHN 71
GK RVE+S N
Sbjct: 84 HGKELHGAEIRVEISRN 100
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVEL+H +G
Sbjct: 69 DFDGHQLRVELAHGGRG 85
>gi|308452462|ref|XP_003089055.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
gi|308243476|gb|EFO87428.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
Length = 116
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL +E++L D F + G ++++W+A+RPPG+AFV F A DA++ L+G
Sbjct: 18 QVYVGNLPFDATEKELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNG 75
>gi|388291|gb|AAA28729.1| RNA binding protein, partial [Drosophila melanogaster]
Length = 43
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEF 45
RVYVGNL +V + DLE EF +G L SVW+A PPG+AFVEF
Sbjct: 1 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEF 43
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWV---ARRPPGYAFVEFDDRRDAVDAIRALDG 60
VYVGNL V E+++ED F +G +R++ + +R P +AF++FDDRRDA +A+RA DG
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + V RPPG+AFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 62 ----NGWRVELSH 70
N RVEL+H
Sbjct: 69 NFDGNRLRVELAH 81
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + V RPPG+AFVEF+D RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 62 N----GWRVELSH 70
N RVEL+H
Sbjct: 69 NFDGNRLRVELAH 81
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + V RPPG+AFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 62 ----NGWRVELSH 70
N RVEL+H
Sbjct: 69 NFDGNRLRVELAH 81
>gi|294893816|ref|XP_002774661.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239880054|gb|EER06477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 147
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VYVGNL+ E +LE F+ +G + SVWVAR PPG+AFV F+D RDA DA R DGK+
Sbjct: 6 KVYVGNLEEGTREEELEKVFKRYGGIESVWVARNPPGFAFVTFEDARDADDACRGEDGKD 65
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+G L R SERD+E FR +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 3 ARVYIGRLSYRASERDIEHLFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSKGGGGRG 79
+ G R+ L + +G GRG
Sbjct: 60 DLCGERIILEFSRRGPRGRG 79
>gi|383856885|ref|XP_003703937.1| PREDICTED: uncharacterized protein LOC100879230 [Megachile
rotundata]
Length = 183
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VW+A PPG+AF+EF + +A A +++G
Sbjct: 13 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWIAFNPPGFAFIEFLNMNEAELACSSMNGT 72
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 73 EIMGAKLRVEIS 84
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 20/121 (16%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRS--VWVAR---RPPGYAFVEFDDRRDAVDAIR 56
SR++VG L V+ER LE F +G + + V R RP G+ F+ F DRR A DAI+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 57 ALDGKNGWRVELSHNS-------------KGGGGRGGRGRGGGEDLKCYECGEPGHFARE 103
+ G+ +S N K GGG RG+G + +C++C PGH+AR+
Sbjct: 72 HMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKG--TEDECFKCRRPGHWARD 129
Query: 104 C 104
C
Sbjct: 130 C 130
>gi|443714454|gb|ELU06855.1| hypothetical protein CAPTEDRAFT_164776 [Capitella teleta]
Length = 196
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
RV+VG L R + +LE EF FG + VWVAR PPG+AFV + DA A++ LDG+
Sbjct: 13 RVFVGELGSRAGKYELEKEFEYFGPIVDVWVARNPPGFAFVVYKHSADAKKAVKELDGR 71
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 17/85 (20%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI G+
Sbjct: 32 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 88
Query: 62 NGW-------RVELSHNSKGGGGRG 79
NG+ RVEL+H GGRG
Sbjct: 89 NGYDFDGHRLRVELAH-----GGRG 108
>gi|221504228|gb|EEE29903.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 344
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 7 GNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
G ++ + +LE F +G + +VWVAR PPG+AF+ FDD RDA DA+ LDG
Sbjct: 190 GGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 243
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding
protein srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSKGGGG--RGGR 81
+G+R+ + GG G RG R
Sbjct: 68 DYDGYRLRVEFPRGGGPGSYRGNR 91
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDNRDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSKGGGG 77
+G+R+ + GG G
Sbjct: 69 DYDGYRLRVEFPRGGGPG 86
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 62 NG----WRVELSHNSKG 74
N RVE +H +G
Sbjct: 69 NFDGHRLRVEAAHGGRG 85
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSKGGGG--RGGR 81
+G+R+ + GG G RG R
Sbjct: 68 DYDGYRLRVEFPRGGGPGSYRGNR 91
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 22/122 (18%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
SR++VG L V+ER LE F +G + + RP G+ F+ F DRR A +AI+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTDRRGADEAIK 71
Query: 57 ALDGKN-GWRV-------------ELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAR 102
+ G+ G RV ++ H KGGG RG G + +C++C PGH+AR
Sbjct: 72 HMHGRELGDRVISVNKAEPKVGGDDVDHLQKGGGYSS---RGKGSEDECFKCRRPGHWAR 128
Query: 103 EC 104
+C
Sbjct: 129 DC 130
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHHLRVELAH 81
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA +AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
N RVE +H GGRG D
Sbjct: 69 NFDGHRLRVEAAH--------GGRGNASSHD 91
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA +AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
N RVE +H GGRG D
Sbjct: 69 NFDGHRLRVEAAH--------GGRGNASSHD 91
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDG- 60
+YVGNL + ER +ED F +G + + V RPPGYAFVEF+D RDA DA DG
Sbjct: 9 IYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 61 ---KNGWRVELSHNSKGGGG 77
N RVE +H +G GG
Sbjct: 69 NFDGNRLRVEPAHGGRGSGG 88
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSKGGGG 77
+G+R+ + GG G
Sbjct: 68 DYDGYRLRVEFPRGGGPG 85
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPP YAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVEL+H KG
Sbjct: 69 DFDGCKLRVELAHGGKG 85
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGDRVILDYS 71
>gi|340712414|ref|XP_003394755.1| PREDICTED: hypothetical protein LOC100651873 [Bombus terrestris]
gi|350399719|ref|XP_003485617.1| PREDICTED: hypothetical protein LOC100747513 [Bombus impatiens]
Length = 201
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VWVA PPG+AF+EF + +A A +++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEF-AKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKA 119
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSKGGGG 77
+G+R+ + GG G
Sbjct: 68 DYDGYRLRVEFPRGGGPG 85
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V R++ED F +G + + + RPPGYAFVEF+D RDA DAI+ DG
Sbjct: 9 IYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGY 68
Query: 62 NG----WRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGFRLRVELAHGGRG 85
>gi|380011044|ref|XP_003689623.1| PREDICTED: uncharacterized protein LOC100871916 [Apis florea]
Length = 201
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VWVA PPG+AF+EF + +A A +++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 72/161 (44%), Gaps = 40/161 (24%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLED F +G +R V + +AFVEF D RDA DA LDG+
Sbjct: 14 TRLYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARYNLDGR 70
Query: 62 N--GWR--VELSHN-SKGGGGRGGRGRGGGEDL--------------------------- 89
+ G R VE + +G GG R RGG +
Sbjct: 71 DFDGSRMIVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPPGSGRCFNCGIDGHWARDCKA 130
Query: 90 -----KCYECGEPGHFARECRLRIGSRGLGSGRRRSPSPRR 125
+CY CG+ GH R+C+ + G RSPSPRR
Sbjct: 131 GDWKNRCYRCGDSGHIERDCQNSPKNLRRGKSYSRSPSPRR 171
>gi|328779834|ref|XP_396951.3| PREDICTED: hypothetical protein LOC413508 [Apis mellifera]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VWVA PPG+AF+EF + +A A +++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSKGGGG 77
+G+R+ + GG G
Sbjct: 68 DYDGYRLRVEFPRGGGPG 85
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Metaseiulus occidentalis]
Length = 217
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVYVGNL P + +D+ED F +G + + + RR P +AFVEF+D RDA DA+ A DG
Sbjct: 7 SRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPPFAFVEFEDPRDAEDAVSARDG 66
Query: 61 KN----GWRVELSH-NSKGGGGRGGRGRG 84
+ RVE NS G RGRG
Sbjct: 67 YDYDGYKLRVEFPRGNSARPRGGPSRGRG 95
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL ERD+ED F +G + + + RPPGY F+EF++ RDA DAIR DG
Sbjct: 9 LYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGG 80
+ RVEL+H GGRG
Sbjct: 69 DIDGHRLRVELAH-----GGRGA 86
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL V +D+ED F FG VL +RPP +AFVEF+D RDA DA+R+ DG
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDFYGYRLRV 74
>gi|158254301|gb|AAI54223.1| Zgc:85696 [Danio rerio]
Length = 556
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL++ F+ FG V + GYAFV +++ DA+ AI AL G
Sbjct: 83 TKVFVGNLSSMCTTEDLQELFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ VELS G+ + C CG+ GH+A EC
Sbjct: 140 SFKGRPLSVELSKVQPSKQTPTGK-------IPCVSCGKQGHYAGEC 179
>gi|47086421|ref|NP_997973.1| RNA binding motif protein 14 [Danio rerio]
gi|46249892|gb|AAH68361.1| Zgc:85696 [Danio rerio]
gi|68085002|gb|AAH56604.2| Zgc:85696 [Danio rerio]
Length = 556
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL++ F+ FG V + GYAFV +++ DA+ AI AL G
Sbjct: 83 TKVFVGNLSSMCTTEDLQELFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ VELS G+ + C CG+ GH+A EC
Sbjct: 140 SFKGRPLSVELSKVQPSKQTPTGK-------IPCVSCGKQGHYAGEC 179
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---NGFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHNS 72
G RV L ++
Sbjct: 60 ELGGERVILDYSK 72
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 42/152 (27%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRARDLERLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYYLDGR 67
Query: 62 N--GWRVELSHN------SKGGGGRG---GRGR---------------GGGEDLKCYECG 95
+ G R+ + + S+ G RG G GR G KCY CG
Sbjct: 68 DFDGSRITVEASRGAPRGSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCG 127
Query: 96 EPGHFARECRLRIGSRGLGSGRRRSPSPRRRR 127
E GH R C + SPSP++ R
Sbjct: 128 ERGHIERNC-------------KNSPSPKKAR 146
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis
gaditana CCMP526]
Length = 277
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR--RPPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL V ERDL+D F +G +R + + R RPP YAFV F+D RDA DA+ D
Sbjct: 4 RIYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDN 63
Query: 61 K--NGWRVELSHNSKGGGGRGGRGRGGG 86
+G R+ + ++ R RG GGG
Sbjct: 64 YDFDGGRIRVELANETPRRRDDRGFGGG 91
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L + E DLE+ F+ +G +R + + GY FVEFD+RRDA DA+ L+GK
Sbjct: 4 TRVYVGQLTSDIRENDLENFFKGYGRIREITLKN---GYGFVEFDERRDADDAVHDLNGK 60
Query: 62 ----NGWRVELSH 70
RVE++H
Sbjct: 61 PLLGEKIRVEMAH 73
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|403353670|gb|EJY76377.1| hypothetical protein OXYTRI_02116 [Oxytricha trifallax]
Length = 301
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 39 GYAFVEFDDRRDAVDAIRALDGKN--GWRVELSHNSKGG------GGRGGRGRGGGEDLK 90
YAF+EFD+ RDA +A+ L GK+ G ++ + + K G R R +DLK
Sbjct: 102 NYAFIEFDNERDAEEAVDELQGKDMGGLKINIEWSKKSGRFNAKDSKRPQRSERSRDDLK 161
Query: 91 CYECGEPGHFARECR 105
CY C + GHFAR+CR
Sbjct: 162 CYNCNKTGHFARDCR 176
>gi|392901828|ref|NP_502757.2| Protein Y57G11A.5 [Caenorhabditis elegans]
gi|225878077|emb|CAB16494.2| Protein Y57G11A.5 [Caenorhabditis elegans]
Length = 110
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVGN+ +E+++E F + G ++S+W+A+RPPG+AFV F A DA++ L+GK
Sbjct: 18 QVYVGNMPFDATEKEIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGK 76
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 116 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 175
Query: 62 NG----WRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 176 NFDGCRLRVELAH-----GGRG 192
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E+++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 9 LYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
+ RVEL+H +G
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|268579471|ref|XP_002644718.1| Hypothetical protein CBG14713 [Caenorhabditis briggsae]
Length = 113
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+VYVGNL +E++L D F + G ++++W+A+RPPG+AFV + A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEQELHDVFSVMGPIKNIWMAKRPPGFAFVTYKRTVHAYDAVKYLNGK 76
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+Y+G L RVSE+D+E FR +G +R V + G+ FVEFDD+RDA DA+ L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHNS 72
G RV L ++
Sbjct: 60 ELGGERVILDYSK 72
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + +AFVEF D RDA DA +LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRIRGVDMKN---DFAFVEFSDPRDADDARYSLDGR 67
Query: 62 N--GWRVELSHNSKGG--GGRGGRGRG-GGEDLKCYECGEPGHFARECRL 106
+ G R+ + +KGG G R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVEGSRI-IVEFAKGGPRGSRENLGRGLPPGSGRCFNCGIDGHWARDCKA 116
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 17/109 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++YVGN+ ++DL+D F FG + + + Y FV D+ +DA DAI+AL
Sbjct: 21 TKLYVGNVPQPARKKDLQDLFEKFGKVNECDIIK---NYGFVHMDNEQDANDAIKALTNT 77
Query: 62 NGW-----RVELSHNS-KGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
W VE+S + + G+G RG +CY CG+ GH++R+C
Sbjct: 78 E-WMGTRITVEMSKSKVRTQPGQGSRG-------ECYRCGKMGHWSRDC 118
>gi|312073828|ref|XP_003139695.1| hypothetical protein LOAG_04110 [Loa loa]
Length = 300
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD- 59
+ R+++ N D + + DL+D F FG + +VW+A PP +AFV F + DA DA++ ++
Sbjct: 155 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNN 214
Query: 60 ---GKNGWRVELSHNSKGGGGRG 79
G+N +V +H + G RG
Sbjct: 215 AYIGRNKIKVATAHPPRKPGERG 237
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32; AltName:
Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 42/152 (27%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYYLDGR 67
Query: 62 N--GWRVELSHN------SKGGGGRG---GRGR---------------GGGEDLKCYECG 95
+ G R+ + + S+ G RG G GR G KCY CG
Sbjct: 68 DFDGSRITVEASRGAPRGSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCG 127
Query: 96 EPGHFARECRLRIGSRGLGSGRRRSPSPRRRR 127
E GH R C + SPSP++ R
Sbjct: 128 ERGHIERNC-------------KNSPSPKKAR 146
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDTRDADEARYNLDGR 67
Query: 62 --NGWRVELSHNSKG------GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ L +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRI-LVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 120
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 72/157 (45%), Gaps = 29/157 (18%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + +AFV+F D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 N--GWR--VELSHNSKGGG----GRG---GRGR---------------GGGEDLKCYECG 95
+ G R VE + + G GRG G GR G KCY CG
Sbjct: 68 DVDGSRIIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCG 127
Query: 96 EPGHFARECRLRIGSRGLGSGRRRSPSPRRRRSPSYG 132
E GH R C+ GR S SP R RSP G
Sbjct: 128 ERGHIERNCKNSPKKLSTRRGRSYSRSPVRSRSPHRG 164
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 77 YDYDGYRLRV 86
>gi|345488330|ref|XP_001605989.2| PREDICTED: hypothetical protein LOC100122382 [Nasonia
vitripennis]
Length = 188
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ +F FG L VWVA PPG+AF+EF + +A +A ++G
Sbjct: 7 ARVYVGGLNESIKKEDLQMQFEKFGKLNKVWVAFNPPGFAFIEFFNMDEAEEACSNMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 --NGW--RVELSHNSKG 74
+G+ RVEL+H K
Sbjct: 69 DFDGYRLRVELAHGGKA 85
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRM--FGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD 59
+R++VG L+P RDLE+ F+ F L+ V + GYAFVEF+D+RDA DA+ LD
Sbjct: 10 NRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIK---LGYAFVEFEDKRDADDAVYELD 66
Query: 60 GKN--GWRVELSH---NSKGGGGRGGRGRGG 85
K G R+ + H ++GG RG R RGG
Sbjct: 67 RKEFFGSRITVEHATGTARGGDTRGERDRGG 97
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 12/115 (10%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVG L R RDLE F +G +R V + R YAF+E+ D RDA DA LDG
Sbjct: 10 KSRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKR---DYAFIEYSDPRDADDAQYNLDG 66
Query: 61 K--NGWR--VELSHN-SKGGGGRGGR---GRGGGEDL-KCYECGEPGHFARECRL 106
+ +G R VE + +G GG R GRG +C+ CG GH+AR+C+
Sbjct: 67 RDVDGSRIIVEFAKGIPRGPGGSREREYMGRGPPPGTGRCFNCGIDGHWARDCKA 121
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEFDD RDA DA+ A DG
Sbjct: 21 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 80
Query: 61 -KNGWRVELSHNSKGG 75
+G+R+ + GG
Sbjct: 81 DYDGYRLRVEFPRGGG 96
>gi|23208529|gb|AAN15784.1| RNA binding-like protein [Galleria mellonella]
Length = 57
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 18 LEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK----NGWRVELSH 70
+E F +G +R+VWVAR PPG+AFVEF+D RDA D++R LDG RVE+S+
Sbjct: 1 IEKVFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSN 57
>gi|348520155|ref|XP_003447594.1| PREDICTED: hypothetical protein LOC100696008 [Oreochromis
niloticus]
Length = 575
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL+ F+ FG V + GYAFV +++ DA+ AI AL G
Sbjct: 83 TKVFVGNLSGMCTTEDLQQLFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
+ VELS G+ + C CG+ GH+A EC +
Sbjct: 140 SFKGRPLSVELSKVQPSKQAPTGK-------IPCVNCGKQGHYAGECPV 181
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALD 59
+RVYVGNL + R++ED F +G +R + V RPP +AFV+F+D RDA DAIR D
Sbjct: 4 TRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRD 63
Query: 60 G------------KNGWRVELSHNSKGGGGRGGRG-RGGGE 87
G NG R E + +S G R R RG GE
Sbjct: 64 GYDYDGARLRVEAANGGRRESARDSARGSARYPRNIRGNGE 104
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + + RPP Y FVEF+ RDA DAIRA DG
Sbjct: 9 IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G V + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHHLRVELAH 81
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL V +D+ED F FG VL +RPP +AFVEF+D RDA DA+R+ DG
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 61 KN--GWRVELS 69
+ G+R+ +
Sbjct: 65 YDFYGYRLRVE 75
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVGNL V ERD+E F+ +G +R V + GY FVEFDD RDA D + +DGK
Sbjct: 5 SRVYVGNLPENVRERDVEKLFKEYGRIREVVIK---SGYGFVEFDDPRDADDVVNDMDGK 61
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDPRDADEARYNLDGR 67
Query: 62 --NGWRVELSHNSKG------GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ L +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRI-LVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 120
>gi|242015115|ref|XP_002428219.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
gi|212512780|gb|EEB15481.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
Length = 221
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NL ++ DL F +G + V V R+ G AFV F + DA + +
Sbjct: 12 STVYVSNLSFSLTNNDLHKVFSEYGKVVKVTVMKDRKTRKSKGVAFVLFLKKEDAQNCCK 71
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFARECRLRIGSRGL 113
L+GK + L + GR R R + KCYECGE GH + +C + L
Sbjct: 72 MLNGKEMFGRTLKASIASDNGRSAQFIRRRDYPDKSKCYECGEDGHLSYKCPHNV----L 127
Query: 114 GSGRRRSPSPRRRRSPSYGYGRRCGSRAMSSSAMAQGSYTYESCNSI---NVESVSSPLQ 170
G R P P+++R R + ++ + ++S N + ++E++S+ +
Sbjct: 128 G---ERQPPPKKQR-----------IRKKKNKNSSEPNIDFDSDNEVYEPDMETLSAAIA 173
Query: 171 L-----QRYGYQFR 179
L ++ Y+F+
Sbjct: 174 LDHEEAEKIKYEFK 187
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA +A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGG 77
N RVE +H +G GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA +AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
N RVE +H GGRG D
Sbjct: 69 NFDGHRLRVEAAH--------GGRGNASSHD 91
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSKGGGGRGGRG-------RGGGEDLKCYECGEPGHFAREC 104
+G R+ + + G RG R G G +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSR--GAPRGSRDFDSRGPPPGAG---RCFNCGVDGHWARDC 114
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSKGGGGRGGRG-------RGGGEDLKCYECGEPGHFAREC 104
+G R+ + + G RG R G G +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSR--GAPRGSRDFDSRGPPPGAG---RCFNCGVDGHWARDC 114
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 14/92 (15%)
Query: 16 RDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN--GWRVELSHNSK 73
RDLED F +G L V R GY FVE++DRRDA DA+R LDG + G R+ +
Sbjct: 35 RDLEDLFYKYGKLTRCDVKR---GYGFVEYEDRRDAQDALRDLDGVSVLGTRIAIEW--- 88
Query: 74 GGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+G + C+ CGE GH+AR+C+
Sbjct: 89 ------AKGARRTDTDTCFRCGEEGHWARDCK 114
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA +A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGG 77
N RVE +H +G GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|432920249|ref|XP_004079910.1| PREDICTED: uncharacterized protein LOC101158309 [Oryzias latipes]
Length = 564
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL+ F+ FG V + GYAFV +++ DA+ AI AL G
Sbjct: 83 TKVFVGNLSGMCTTEDLQQLFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
+ VELS G+ + C CG+ GH+A EC +
Sbjct: 140 SFKGRPLSVELSKVQPSKQAPTGK-------IPCVNCGKQGHYAGECPV 181
>gi|85000399|ref|XP_954918.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303064|emb|CAI75442.1| RNA-binding protein, putative [Theileria annulata]
Length = 146
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 10/70 (14%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFV----------EFDDRRDAV 52
R++VGNL V+ +DL+ F +G + +VWVAR PPG+ FV FDD RDA
Sbjct: 12 RLFVGNLVDSVTTQDLDSLFSKYGKVTNVWVARNPPGFGFVVCYNLFHLSQTFDDPRDAK 71
Query: 53 DAIRALDGKN 62
DA+ L+GK+
Sbjct: 72 DALIELNGKD 81
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEFD+ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+G L RV ERD+E FR +G LR V + GY FVEF+D RDA DA+ L+GK
Sbjct: 3 TRVYIGGLPYRVKERDIERFFRGYGKLREVLIKN---GYGFVEFEDYRDADDAVYELNGK 59
Query: 62 N--GWRVELSH 70
G RV + H
Sbjct: 60 ELCGERVSVEH 70
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRALDGK 61
+Y+G L ++++L D F +G + V ++ G YAFVE+ +RRDA DA++AL+G
Sbjct: 3 LYIGRLSVETTQKNLNDHFSKYGTITRNDV-KKTNGRCYAFVEYKERRDADDALKALNGT 61
Query: 62 NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
++S GG ++ KC+ CG+ GH+ + C
Sbjct: 62 TLLNSKISVEWAKGGKN-------ADNNKCFACGQEGHWIKSC 97
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + +AFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRVRGVDMKN---DFAFVEFSDPRDADDARYNLDGR 67
Query: 62 N--GWR--VELSHNSKGGGGRGGRGR---------GGGEDLKCYECGEPGHFARECRL 106
+ G R VE + GG RG R R G G +C+ CG GH+AR+C+
Sbjct: 68 DVEGSRIIVEFAK----GGPRGSRDREYMGRGPPPGSG---RCFNCGIDGHWARDCKA 118
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRAL 58
MSR+Y+GNL + E+DLED F +G + + + RPP + FV F+D RDA +A+RA
Sbjct: 53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRAR 112
Query: 59 DGK--NGW--RVELS 69
DG +G+ RVE+S
Sbjct: 113 DGYDFDGYRLRVEMS 127
>gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL+ F+ FG V + GYAFV +++ DA+ AI AL G
Sbjct: 83 TKVFVGNLSGMCTTEDLQQLFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
+ VELS G+ + C CG+ GH+A EC +
Sbjct: 140 SFKGRPLSVELSKVQPSKQTPTGK-------IPCVNCGKQGHYAGECPV 181
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + V RPPGYAFVEF+D RDA +AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVE +H +G
Sbjct: 69 NFDGHRLRVEAAHGGRG 85
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 17/85 (20%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI G+
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
Query: 62 NGW-------RVELSHNSKGGGGRG 79
+G+ RVEL+H GGRG
Sbjct: 66 HGYDFDGHRLRVELAH-----GGRG 85
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 17/85 (20%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI G+
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
Query: 62 NGW-------RVELSHNSKGGGGRG 79
+G+ RVEL+H GGRG
Sbjct: 66 HGYDFDGHRLRVELAH-----GGRG 85
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + V + RPP Y FVEF++ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
N RVEL+H GGRG+ D
Sbjct: 69 NFDGCRLRVELAH--------GGRGQSSSSD 91
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA +A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 N----GWRVELSHNSKGGGG 77
N RVE +H +G GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVGNL V ERD+E F+ +G +R V + GY FVEFDD RDA D + +DGK
Sbjct: 5 SRVYVGNLPENVRERDVEKFFKEYGRIREVVIKS---GYGFVEFDDPRDADDVVNDMDGK 61
>gi|401400142|ref|XP_003880722.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
gi|325115133|emb|CBZ50689.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
Length = 206
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 7 GNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
G ++ + +LE F +G + +VWVAR PPG+AF+ FDD RDA DA+ LDG
Sbjct: 35 GGIEADTTTEELESLFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 88
>gi|393910312|gb|EJD75816.1| hypothetical protein LOAG_17122 [Loa loa]
Length = 190
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD- 59
+ R+++ N D + + DL+D F FG + +VW+A PP +AFV F + DA DA++ ++
Sbjct: 45 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNN 104
Query: 60 ---GKNGWRVELSHNSKGGGGRG 79
G+N +V +H + G RG
Sbjct: 105 AYIGRNKIKVATAHPPRKPGERG 127
>gi|170085409|ref|XP_001873928.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651480|gb|EDR15720.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 477
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G L + DL+ F G++ ++ + GY FVEFD R A +++
Sbjct: 121 NKVYIGGLPEHTRQEDLQSCFGKIGIITNIELKV---GYGFVEFDTREAAEESVAKYHEG 177
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGR 117
N RVELSH GGGR + G+ C++CG+ GH+AREC GL R
Sbjct: 178 FFMGNKIRVELSH----GGGRTAKY--AGDPGACFKCGQMGHWAREC---PNHTGLAPQR 228
Query: 118 R 118
R
Sbjct: 229 R 229
>gi|302816982|ref|XP_002990168.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
gi|300142023|gb|EFJ08728.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
Length = 124
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NLD ++ DL F G + V V R+ G AF+ F R DA A++
Sbjct: 9 STVYVSNLDFALTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVK 68
Query: 57 ALDG----KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
A+DG K +V ++ ++ G R + + +CYECGE GH + EC
Sbjct: 69 AMDGVVLNKRTLKVSIAQDN-GRAREFIRRKVYKDKSRCYECGEDGHLSYEC 119
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + + RPP Y FVEF+ RDA DAIRA DG
Sbjct: 9 IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NFDGCRLRVELAH-----GGRG 85
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L R SERD+E FR +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSKGGGGRGGRG 82
G RV L + +G R G G
Sbjct: 63 ELCGERVILEFSRRGPRSRMGFG 85
>gi|402590530|gb|EJW84460.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 298
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD- 59
+ R+++ N D + + DL+D F FG + +VW+A PP +AFV F + DAVDA++ ++
Sbjct: 153 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNN 212
Query: 60 ---GKNGWRVELSHNSKGGG 76
G+N +V +H + G
Sbjct: 213 AYIGRNKIKVATAHPPRKPG 232
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
Length = 125
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NLD ++ DL F G + V V R+ G AF+ F R DA A++
Sbjct: 10 STVYVSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVK 69
Query: 57 ALDG----KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
A+DG K +V ++ ++ G R + + +CYECGE GH + EC
Sbjct: 70 AMDGVVLNKRTLKVSIAQDN-GRAREFIRRKVYKDKSRCYECGEDGHLSYEC 120
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica
Group]
Length = 151
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 12/80 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI G+
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
Query: 62 NGW-------RVELSHNSKG 74
+G+ RVEL+H +G
Sbjct: 66 HGYDFDGHRLRVELAHGGRG 85
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRALDGK 61
+Y+G L +ER L D F +G + V +R G YAF+E+ +++DA DA++AL+G
Sbjct: 3 LYIGRLSTDTTERHLNDHFSKYGTITRNDV-KRSNGRCYAFIEYKEKKDADDALKALNGT 61
Query: 62 NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
++S GG ++ KC+ CG+ GH+ + C
Sbjct: 62 TLLNSKISVEWAKGG-------KNADNNKCFACGQEGHWIKNC 97
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + RD+ED F +G +R + V RPP +AFV F+D RDA DAIR DG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 62 N--GWRVELSHNSKGGGGRGGR 81
+ G R+ S+G G RG R
Sbjct: 61 SFEGARLRCEM-SRGNGPRGSR 81
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 14/85 (16%)
Query: 4 VYVGNLDPRVSERDLEDEF--------RMFG--VLRSVWVARRPPGYAFVEFDDRRDAVD 53
+YVGNL + ER+++D F RM+G V + + RPPG+AFVEF+D RDA D
Sbjct: 9 IYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 68
Query: 54 AIRALDGKN----GWRVELSHNSKG 74
AI DG N RVEL+H +G
Sbjct: 69 AIYGRDGYNFDGHRLRVELAHGGRG 93
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 12/80 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAFVEF+D RDA DAI G+
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
Query: 62 NGW-------RVELSHNSKG 74
+G+ RVEL+H +G
Sbjct: 66 HGYDFDGHRLRVELAHGGRG 85
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L R SERD+E FR +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSKGGGGRGGRG 82
G RV L + +G R G G
Sbjct: 63 ELCGERVILEFSRRGPRSRMGFG 85
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRAL 58
M+RV+VGNL V ERDL D+F FG + SV + RPP +AF+ +D+ DA DA+R++
Sbjct: 1 MARVFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSM 60
Query: 59 DG 60
G
Sbjct: 61 HG 62
>gi|410929393|ref|XP_003978084.1| PREDICTED: uncharacterized protein LOC101079487 [Takifugu rubripes]
Length = 568
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL + DL+ F+ FG V + GYAFV + + DA+ AI AL G
Sbjct: 83 TKVFVGNLSGMCTTEDLQQLFQTFG---KVLECDKVKGYAFVHMETKEDALQAIEALHGT 139
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
+ VELS G+ + C CG+ GH+A EC +
Sbjct: 140 SFKGRPLSVELSKVQPSKQTPTGK-------IPCVNCGKQGHYAGECPV 181
>gi|402583204|gb|EJW77148.1| hypothetical protein WUBG_11940 [Wuchereria bancrofti]
Length = 146
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
R++V N+D V RDLE+ F FG L VWVA PP +AFV F ++ DA +A+ AL+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNN 104
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
+R+YVGNL P + +D+ED F FG + + + RR P +AFVEF+D RDA DA+ A DG
Sbjct: 9 ARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPPFAFVEFEDPRDAEDAVHARDG 68
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 69 YDYDGYRLRV 78
>gi|197725795|gb|ACH73087.1| arginine/serine-rich 7 splicing factor [Epinephelus coioides]
Length = 200
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 35 RRPPGYAFVEFDDRRDAVDAIRALDGK----NGWRVELSH--NSKGGGGRGGRGRGGGED 88
R PPG+AFVE++D RDA DA++ +DGK + RVELS + K GR R R +
Sbjct: 1 RNPPGFAFVEYEDSRDAEDAVKGMDGKVLCGSRIRVELSTGLSRKTRYGRPSR-RHFDPN 59
Query: 89 LKCYECGEPGHFAREC 104
+CY+CG+ GH+A +C
Sbjct: 60 DRCYQCGDKGHYAYDC 75
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 371
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 370
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 12/113 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YV L R RDLE F +G +R V + R YAF+EF D RDA +A LDG+
Sbjct: 11 TRLYVSRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHNSKG-----GGGRGGRGRGGGEDL-KCYECGEPGHFARECRL 106
+G R+ + +KG GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEF-AKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKA 119
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NLD ++ DL F FG + V + R G AF+ + R DA A++
Sbjct: 19 STVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAAVK 78
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFARECRLRIGSRGL 113
++GK + L + GR R R + +CYECGE GH + EC + L
Sbjct: 79 TMNGKILNKRTLKVSIAEDNGRAKEFIRRREYKDKSRCYECGEGGHLSYECPKNL----L 134
Query: 114 GSGRRRSPSPRRRR 127
GS R P +R+R
Sbjct: 135 GS--RERPVAKRKR 146
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D DA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D DA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 77 YDYDGYRLRV 86
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL V E+++ED F +G ++ V + R P +AFVEF+D RDA DA+RA DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
Query: 61 K--NGWRVELSHNSKGGGGRGGRGR 83
+G R+ + ++G G RG GR
Sbjct: 69 YEFDGRRIRVEF-TRGVGPRGPSGR 92
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG + PR +ERD+E F+ +G LR + + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L R SERD+E FR +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSKGGGGRGGRG 82
G RV L + +G R G G
Sbjct: 63 ELCGERVILEFSRRGPRSRMGFG 85
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D DA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSKG-----------GGGRGGRGRGGGEDLKCYECGEP 97
+G+R VEL+H +G G G RG D + G P
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 150
>gi|393909592|gb|EFO27939.2| hypothetical protein LOAG_00532 [Loa loa]
Length = 173
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
R++V N+D V RDLE+ F FG L VWVA PP +AFV F ++ DA +A+ AL+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNN 104
>gi|312066123|ref|XP_003136120.1| hypothetical protein LOAG_00532 [Loa loa]
Length = 201
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
R++V N+D V RDLE+ F FG L VWVA PP +AFV F ++ DA +A+ AL+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNN 104
>gi|405974855|gb|EKC39468.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Crassostrea gigas]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV----ARRPPGYAFVEFDDRRDAVDAIRA 57
S VYVGNL ++ D+ F +G + V V ARR G AF+ F ++ A+ A+RA
Sbjct: 10 STVYVGNLPFSLTNNDIHKIFEKYGRVAKVTVLKDDARRSKGVAFIMFIEKESAIKAVRA 69
Query: 58 LDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFAREC 104
L+ + + N GR + + + KCYECG+ GH + +C
Sbjct: 70 LNKTEMFGRTIKCNIAKDNGRTTEFIKRKNYPDKSKCYECGDEGHLSYKC 119
>gi|405966435|gb|EKC31722.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 228
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG+L RV + +LE EF+ FG + VWVAR PPG+AF+ + DA +A++ L G
Sbjct: 12 RVFVGDLGSRVGKYELEREFQHFGPIMDVWVARNPPGFAFLVYKYGEDAEEAVKKLHGNL 71
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 72 VCGRRVRVEH 81
>gi|2078529|gb|AAC51293.1| Hlark [Homo sapiens]
Length = 366
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
G R+ + ++ R G G+ CY CG+ GH+++EC +
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKECPI 177
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-ARRPPGYAFVEFDDRRDAVDAIRALDG 60
+++YVGNL P V RD+E+ F +G + + + +RR P +AF+EF+D DA DA+R DG
Sbjct: 6 TKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPPFAFIEFEDELDAADAVRGRDG 65
Query: 61 KN----GWRVEL------SHNSKGG 75
N RVE S+N GG
Sbjct: 66 YNFDGYALRVEFPRGGTASYNGSGG 90
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + V + RPP Y FVEF++ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRGGRGRGGGED 88
N RVEL+H GGRG+ D
Sbjct: 69 NFDGCRLRVELAH--------GGRGQSSSSD 91
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALDG 60
R+Y+GNL + ERDLED F +G + S+ + RR P +AFVEF+D+RDA DAI DG
Sbjct: 8 RIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAI---DG 64
Query: 61 KNGW 64
++G+
Sbjct: 65 RDGY 68
>gi|225706140|gb|ACO08916.1| Splicing factor, arginine/serine-rich 4 [Osmerus mordax]
Length = 101
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS----KGGGGRGGRGR 83
K+ G RV + H G G GGR +
Sbjct: 58 KDLCGERVIVEHTKGPRRDGSYGSGGRSK 86
>gi|170584455|ref|XP_001897015.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595605|gb|EDP34147.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 304
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD- 59
+ R+++ N D + + DL+D F FG + +VW+A PP +AFV F + DAVDA++ ++
Sbjct: 149 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNN 208
Query: 60 ---GKNGWRVELSHNSKGGG 76
G+N +V +H + G
Sbjct: 209 AYIGRNKIKVATAHPPRKPG 228
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+++G LD RDLED F +G +LR YAF++F+D RDA DA++ +G+
Sbjct: 9 LFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEMAYAFLDFEDHRDAEDALKEENGRE 68
Query: 63 GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
V + G R + D +CY+C GH+AR+C+
Sbjct: 69 YQGVSMVVEWAKGAPRRQQSSQQAYD-ECYKCHRSGHWARDCK 110
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 14/95 (14%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA---RRPPGYAFVEFDDRRDAVDAIRALD 59
++YVGNL P RD+E+ F +G + ++ + RR P +AFVEF+D DA DA+R D
Sbjct: 11 KIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 70
Query: 60 GKN----GWRVELSHN-------SKGGGGRGGRGR 83
G N RVEL ++GGGG G R
Sbjct: 71 GYNFDGYALRVELPRTGVPERRFNRGGGGASGPSR 105
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVYVG L+ V ERDLE F+ FG +R + + G+ FVEFDD RDA DA+ L+G
Sbjct: 2 TSRVYVGRLNYEVRERDLERFFKGFGRIREISIKN---GFGFVEFDDHRDADDAVYELNG 58
Query: 61 K 61
K
Sbjct: 59 K 59
>gi|170578222|ref|XP_001894321.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158599142|gb|EDP36833.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 200
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
R++V N+D V RDLE+ F FG L VWVA PP +AFV F ++ DA +A+ AL+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNN 104
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSKG 74
+G+R VEL+H +G
Sbjct: 100 DFDGYRLLVELAHGGRG 116
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 68 DYDGYRLRVE 77
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F FG + + + RPPGYAFV+F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGY 68
Query: 62 NG----WRVELSHNSKG 74
+ RVEL+H +G
Sbjct: 69 DFDGFRLRVELAHGGRG 85
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 1 MSR-VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRA 57
M+R +YVGNL V E ++ED F +G + V V RPPGY F+EF+D RDA DAIR
Sbjct: 5 MTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRG 64
Query: 58 LDGKN----GWRVELSH 70
DG N RVE +H
Sbjct: 65 RDGYNFDGHRIRVEFAH 81
>gi|431913362|gb|ELK15038.1| Centrosomal protein of 192 kDa [Pteropus alecto]
Length = 2375
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 30 SVWVARRPPGYAFVEFDDRRDAVDAIRALDGK---NGW-RVELS 69
+VW+AR PPG+AF EF+D RD DA+R LDGK W RVELS
Sbjct: 98 TVWIARNPPGFAFAEFEDPRDVEDAVRGLDGKVICGSWARVELS 141
>gi|405959140|gb|EKC25204.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 318
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPP--GYAFVEFDDRRDAVDAIRAL 58
+++VYVG L V + LE+ F FG++++VW+AR P GYAFV F D + A +A++ L
Sbjct: 11 IAKVYVGGLTENVEKYHLEELFERFGLVKTVWIARNPLSRGYAFVTFFDPKHAEEAVKGL 70
Query: 59 DGK----NGWRVELSHN 71
+G + +V+LS N
Sbjct: 71 NGTALQGSKLKVQLSKN 87
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSKGGGGRGGRGRGGGEDLKCYECGEPG 98
+G+R VEL+H GGRG D G G
Sbjct: 100 DFDGYRLLVELAH--------GGRGSSSSVDRYSRHSGRSG 132
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 26/129 (20%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARR----PPGYAFVEFDDRRDAVDAIR 56
+R++VG L SER LED F +G +L S+ + R P G+ F+ F D R DAIR
Sbjct: 7 NRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIR 66
Query: 57 ALDGK--NGWRVELSH------NSKGGGGRGGRGR--GG-----------GEDLKCYECG 95
+ G+ +G + ++ + G G GGR R GG G C++CG
Sbjct: 67 EMHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSDDCFKCG 126
Query: 96 EPGHFAREC 104
PGH+AR+C
Sbjct: 127 RPGHWARDC 135
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 68 DYDGYRLRVE 77
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA++A DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 68 DYDGYRLRVE 77
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+Y+GN+ ERD+E F+ +G LR + + GY FVEF+D RDA DA++ LDGK
Sbjct: 7 RLYLGNVSDETRERDVEKFFKGYGKLREIALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRVELSHNSKGGGGRGG 80
NG RV + RGG
Sbjct: 64 MNGSRVRVEFARSPRDKRGG 83
>gi|332026868|gb|EGI66971.1| RNA-binding protein Rsf1 [Acromyrmex echinatior]
Length = 258
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VWVA PPG+AF+EF + +A A ++G
Sbjct: 7 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 19/91 (20%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPG--------------YAFVEFDD 47
R+YVGNL P + E+D+ED F FG + + + +RPP +AFVEF D
Sbjct: 17 RIYVGNLPPDIREKDIEDMFYKFGSVADIDLKNKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 48 RRDAVDAIRALDGKN--GW--RVELSHNSKG 74
RRDA DA+ A DG N G+ RVE +KG
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKG 107
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + R+ P +AFVEF+D RDA DA+RA DG
Sbjct: 13 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPRDADDAVRARDGY 72
Query: 61 -KNGWRVEL 68
+G+R+ +
Sbjct: 73 DYDGYRLRV 81
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 24 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 83
Query: 61 --KNGWRVELSHNSKGGGGRGGRGRGGG 86
+G+R+ + R GRG G G
Sbjct: 84 YDYDGYRLRVEFP------RSGRGTGSG 105
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 62 --NGWR--VELSHNSKG 74
+G+R VEL+H +G
Sbjct: 69 DFDGYRLLVELAHGGRG 85
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERDLE FR +G ++ V + G+AFVEFDD RDA DA+ L+GK
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + +AFV+F D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 NGWRVELSHNSKGGGGRGGR---GRGGGEDL-KCYECGEPGHFARECR 105
+ + G RG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCK 115
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+++G + DLED FR +G ++R + FVE++D+RDA +A++A
Sbjct: 2 LFIGRVPEDARSSDLEDIFRKYGKIIRCDVKHGASVSFGFVEYEDKRDAEEAVKA----- 56
Query: 63 GWRVELSHN--------SKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLG 114
G E N +K GG RGG G C++CGE GH+AREC G
Sbjct: 57 GQETEFEFNGAKMYVEWAKAGGRRGGERSDG-----CFKCGETGHWAREC-----PNSGG 106
Query: 115 SGRRRSPSPRRRRSPSY 131
GR RSP R SY
Sbjct: 107 GGRDRSPRRDRGYDRSY 123
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF E+ DA A+R+LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 ----GWRVELSHNSKGGGG-----RGGRGRGGG 86
RVE +H + RGGR G G
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRG 103
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVY+G L R ERD+ED F+ +G +R + + G+ FVEFDD RDA DA+ L+G+
Sbjct: 90 SRVYIGRLPYRARERDVEDFFKGYGRIREILLKN---GFGFVEFDDPRDADDAVYHLNGR 146
Query: 62 N--GWRVELSHNSKGGGGRGG 80
G R+ + + GR
Sbjct: 147 ELCGERIIVEMTKRPPKGRDA 167
>gi|225448910|ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Vitis vinifera]
gi|147789032|emb|CAN75783.1| hypothetical protein VITISV_022491 [Vitis vinifera]
Length = 250
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NLD ++ DL F FG + V + R G AFV F R +A+ A R
Sbjct: 51 STVYVSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAR 110
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFAREC-RLRIGSRG 112
++GK + L+ + GR R R + +CYECGE GH + EC R ++G
Sbjct: 111 EMNGKVLNKRTLTASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLGP-- 168
Query: 113 LGSGRRRSPSPRRRR 127
R P P+R R
Sbjct: 169 -----RERPVPKRSR 178
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + V + RPP Y FVEF++ RDA DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NFDGCRLRVELAH-----GGRG 85
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R++VG L+P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFVGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSKGGGGRGGRGRGGGEDLKCYECGEPG 98
+G+R VEL+H GGRG D G G
Sbjct: 100 DFDGYRLLVELAH--------GGRGSSSSVDRYSRHSGRSG 132
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + RPPGYAFVEF+D DA AIR LDG
Sbjct: 8 LYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGY 67
Query: 62 N----GWRVELSH 70
N RVEL+H
Sbjct: 68 NFDACRLRVELAH 80
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + RPPGYAFVEF++ RDA DAIR DG
Sbjct: 8 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 67
Query: 62 N----GWRVELSH 70
N RVEL+H
Sbjct: 68 NFDGCRLRVELAH 80
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + +PPGYAFVEF+D RDA DAI DG
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 62 --NGWR--VELSHNSKGGGGRGGRGRGGGEDLKCYECGEPG 98
+G+R VEL+H GGRG D G G
Sbjct: 69 DFDGYRLLVELAH--------GGRGSSSSVDRYSRHSGRSG 101
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
+R+YVGNL P + RD+E F FG + +V + R+ P +AFVEF+D RDA DA+R DG
Sbjct: 10 ARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPPFAFVEFEDARDAEDAVRYKDG 69
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRV++G L P+ ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 4 SRVFIGRLSPQARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 60
Query: 62 N--GWRVELSH 70
RV + H
Sbjct: 61 ELLSERVTIEH 71
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF R D +AI LDG
Sbjct: 111 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTE 170
Query: 62 -NGWRVEL 68
NG ++++
Sbjct: 171 LNGRKLKI 178
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+Y+GN+ ERD+E F+ +G LR V + GY FVEF+D RDA DA++ LDGK
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRVELS 69
NG RV +
Sbjct: 64 MNGSRVRVE 72
>gi|2078531|gb|AAC53171.1| Mlark [Mus musculus]
Length = 367
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
G R+ + ++ R G G+ CY CG+ GH+++EC +
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKECPI 177
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRALDGK 61
+Y+G L + RDL++ F ++G ++ + ++ G +AF+EF +RRDA DA++AL+G
Sbjct: 3 LYIGGLTAETNARDLDNLFSVYGTIQRNDI-KKTSGRCFAFIEFKERRDADDALKALNGA 61
Query: 62 N--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G ++ + SKGG G D KC+ C + GH+A++C
Sbjct: 62 KLLGSKITVEW-SKGG--------GKAPDNKCFTCQQSGHWAKDC 97
>gi|322798568|gb|EFZ20180.1| hypothetical protein SINV_12527 [Solenopsis invicta]
Length = 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L+ + + DL+ EF +G L VWVA PPG+AF+EF + +A A ++G
Sbjct: 11 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 70
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 71 EIMGAKLRVEIS 82
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKGGG------GRGGRGRGG 85
RVE +H +G R G RGG
Sbjct: 69 KFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGG 102
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRV++G L P+ ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 21 SRVFIGRLSPQARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 77
Query: 62 N--GWRVELSH 70
RV + H
Sbjct: 78 ELLSERVTIEH 88
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF R D +AI LDG
Sbjct: 128 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTE 187
Query: 62 -NGWRVEL 68
NG ++++
Sbjct: 188 LNGRKLKI 195
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S +YV NLD ++ D+ F FG + V V R+ G AFV + R DA A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 57 ALDGK--NGWRVELSHNSKGG-GGRGGRGRGGGEDLKCYECGEPGHFAREC 104
++D K NG ++ +S + G + R + +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYEC 167
>gi|145539490|ref|XP_001455435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423243|emb|CAK88038.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 1 MSR-VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD 59
MSR +YVG L + S DL+ EF+ +G ++ + + +AF+EF+ R DA AI +D
Sbjct: 1 MSRQIYVGRLGQKTSREDLQKEFQRYGKIKDIDLR---STHAFIEFEGRDDAKKAISQMD 57
Query: 60 GKN--GWRVEL-SHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
GK G R+ + S +++ G G R D+ C+ CG GH+A +C+
Sbjct: 58 GKRIGGDRITVKSRDNRHLGANGPTAR----DV-CFNCGRKGHWANDCK 101
>gi|300122234|emb|CBK22807.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIR 56
MSRV++GN R+ + DL F FG + +VW+AR PPG+AFV F +A AIR
Sbjct: 13 MSRVHIGNT-ARLEKEDLRQAFEQFGTVTNVWIARNPPGFAFVTFSTPEEAEKAIR 67
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 15/116 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGSVRDVDMKH---DYAFVEFRDPRDADDARYNLDGR 67
Query: 62 --NGWR--VEL-------SHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
+G R VE S +S+ GRG G +C+ CG GH+AR+C+
Sbjct: 68 DIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGS-GRCFNCGIDGHWARDCKA 122
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Oreochromis niloticus]
Length = 293
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+++G L P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFIGRLSPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+Y+GN+ ERD+E F+ +G LR V + GY FVEF+D RDA DA++ LDGK
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRVELS 69
NG RV +
Sbjct: 64 MNGSRVRVE 72
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + + RPP Y FVEF+ RDA DAIR DG
Sbjct: 9 IYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NFDGCRLRVELAH-----GGRG 85
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L +ERDLE FR +G +R V + GY FVEFDD RDA DA+ L+GK
Sbjct: 4 SRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKN---GYGFVEFDDHRDADDAVYELNGK 60
Query: 62 N--GWRVEL 68
G RV +
Sbjct: 61 KLLGERVTV 69
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR-PPGYAFVEFDDRRDAVDAIRALDGK 61
RVYVGNL V RD+ED F +G ++++ + R P +AF+EF+D RDA DA+ DG+
Sbjct: 13 RVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDPAFAFLEFEDPRDASDAVYGKDGE 72
Query: 62 ----NGWRVELSHNSKGGGGR 78
RV+ NS G R
Sbjct: 73 RFEGQRIRVQFPRNSAAGRER 93
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
+R+YVGNL P + +D+ED F FG + V + RR P + FVEF+D RDA DA++A
Sbjct: 9 NRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPPFVFVEFEDHRDASDAVKARSN 68
Query: 61 --KNGWRVELSHNSKGGGGRGGRGR 83
+G+++ + GG G RGR
Sbjct: 69 YDYDGYKLRVEFPRGGGPGSSYRGR 93
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M +V++GNL R RD+ED FR FG ++ + + G+ FVEFDD RDA DAI ++G
Sbjct: 1 MGKVFIGNLTDRAEGRDVEDAFRKFGRIKEISL---KNGFGFVEFDDVRDAEDAIHEMNG 57
Query: 61 K 61
+
Sbjct: 58 E 58
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL V +D+ED F +G VL RR P +AFVEF+D RDA DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGKVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL V +D+ED F +G VL RR P +AFVEF+D RDA DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + + RPP Y FVEF++ RDA DAIR DG
Sbjct: 9 IYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NFDGCRLRVELAH-----GGRG 85
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGKRVIVEH 69
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SR+YVGNL V +D+ED F +G VL RR P +AFVEF+D RDA DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVYVG L+ V ERDLE F+ FG +R + + G+ FVEFDD RDA DA+ L+G
Sbjct: 2 TSRVYVGRLNYEVRERDLERFFKGFGRIREISIKN---GFGFVEFDDHRDADDAVYELNG 58
Query: 61 K 61
K
Sbjct: 59 K 59
>gi|297267337|ref|XP_001109416.2| PREDICTED: RNA-binding protein 4 isoform 5 [Macaca mulatta]
Length = 693
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 407 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 463
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRL 106
G R+ + ++ R G G+ CY CG+ GH+++EC +
Sbjct: 464 EFQGKRMHVQLSTS----RLRTAPGMGDQSGCYRCGKEGHWSKECPI 506
>gi|291231291|ref|XP_002735598.1| PREDICTED: RNA binding motif protein 4B-like isoform 1
[Saccoglossus kowalevskii]
Length = 238
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 24/136 (17%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL V RDL D F +G + V + Y FV D +A +A+ AL+ K
Sbjct: 9 TKVFVGNLSKSVQSRDLRDLFEKYGKVLECDVIK---NYGFVHMDKEDEAKEALDALNSK 65
Query: 62 ----NGWRVELS----HNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC-RLR-IGSR 111
+VELS H + G G +G +C++CG GH++R+C R R + R
Sbjct: 66 EFMGTNIKVELSTSRVHKTPGMGSKG----------ECFKCGRQGHWSRDCGRDRSVEDR 115
Query: 112 GLGSGRRR-SPSPRRR 126
G R R P PR R
Sbjct: 116 GRPRERDRYGPPPRDR 131
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L R ERD+E FR +G + + + GYAFVEF DRRDA DA+ L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
>gi|358331940|dbj|GAA50688.1| serine/arginine-rich splicing factor 4 [Clonorchis sinensis]
Length = 207
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G+L R SERD+E F+ +G LR V + GY FVEFD+ +DA DA+ L G
Sbjct: 1 MSRVYIGHLPARCSERDIERFFKGYGRLRDVVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
+ G R+ + H
Sbjct: 58 RELRGERIIVEH 69
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L R ERD+E FR +G + + + GYAFVEF DRRDA DA+ L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
Query: 62 N--GWRVELSHNSK 73
+ G RV + N+K
Sbjct: 60 SLLGDRV-IVQNAK 72
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+YVG+L+ ++ D+E EF +G L +W+AR PPG+AFVEF+ A A++ L+G+
Sbjct: 9 RLYVGSLNHSTTKDDVEREFGKYGHLVDIWMARNPPGFAFVEFETAGQAEAALKELNGRT 68
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAI-RALD 59
+++VY+G L + DLE F G + ++ + GY FVEFD R A +++ + +
Sbjct: 115 LNKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV---GYGFVEFDSREAAEESVAKYHE 171
Query: 60 G---KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
G N RVE+SH GGGR + G+ C++CG+ GH+AREC L +G
Sbjct: 172 GYFMGNKIRVEISH----GGGR--TAKYSGDPGACFKCGQMGHWAREC-----PNHLAAG 220
Query: 117 RRRS 120
RR S
Sbjct: 221 RRPS 224
>gi|170596998|ref|XP_001902973.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
gi|158589007|gb|EDP28178.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
Length = 128
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L R ERD+E FR +G + + + GYAFVEF DRRDA DA+ L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
Query: 62 N--GWRVELSHNSK 73
+ G RV + N+K
Sbjct: 60 SLLGDRV-IVQNAK 72
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 243
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G++R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERDLE FR +G ++ V + G+AFVEFDD RDA DA+ L+GK
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMK---NGFAFVEFDDYRDADDAVYELNGK 59
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+++G L+P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 32/131 (24%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-----RPPGYAFVEFDDRRDAVDAIRA 57
R ++G L S+R L+D F +G L V R G+ FV FDD+ +AI A
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 58 LDGKN--GWRVELSHNSKGGGGR----------------------GGRGRGGGEDLKCYE 93
++G + G + + G G RG GGE C++
Sbjct: 290 MNGIDLDGRTITVDKAQPQGSRDDDDRHRERGRDSRDRNRSRDYGGSRGSNGGE---CFK 346
Query: 94 CGEPGHFAREC 104
CG+PGHFAREC
Sbjct: 347 CGKPGHFAREC 357
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 17/112 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFV F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVVFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSKGGGGRGGRG-------RGGGEDLKCYECGEPGHFAREC 104
+G R+ + + G RG R G G +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSR--GAPRGSRDFDSRGPPPGAG---RCFNCGVDGHWARDC 114
>gi|56756196|gb|AAW26273.1| unknown [Schistosoma japonicum]
Length = 224
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF E+ DA A+R+LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 ----GWRVELSHNSKGGGG-----RGGRGRGGG 86
RVE +H + RGGR G G
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRG 103
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S +YV NLD ++ D+ F FG + V V R+ G AFV + R DA A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAAR 116
Query: 57 ALDGK--NGWRVELSHNSKGG-GGRGGRGRGGGEDLKCYECGEPGHFAREC 104
++D K NG ++ +S + G + R + +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYEC 167
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E +ED F +G + V + RPP Y FVEF++ RDA DAIR DG
Sbjct: 9 IYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NFDGSRLRVELAHGGRG 85
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L R ERD+E FR +G + + + GYAFVEF DRRDA DA+ L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG VL +R P +AFVEFDD RDA DA+ A DG
Sbjct: 7 RIYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPPFAFVEFDDPRDAEDAVHARDGY 66
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 67 DYDGYRLRVE 76
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F FG + + + RR P +AFVEF+D RDA DA A DG
Sbjct: 9 RIYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFEDPRDAEDAAHARDGY 68
Query: 61 -KNGWRVEL 68
+G+R+ +
Sbjct: 69 DYDGYRLRV 77
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 KN--GWRVELS 69
+ G+R+ +
Sbjct: 77 YDYYGYRLRVE 87
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ A DG
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAF+E+ D RDA +A LDG+
Sbjct: 11 ARLYVGRLSSRTRSRDLEYLFSKYGRIREVELKR---DYAFIEYSDPRDADEARYNLDGR 67
Query: 62 --NGWR--VELSHN-SKGGGGRGGR---GRGGGEDL-KCYECGEPGHFARECRL 106
+G R VE + +G GG R GRG +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEFAKGVPRGSGGSREREYVGRGPPPGTGRCFNCGIDGHWARDCKA 121
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G+L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGHLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF R D AI DG
Sbjct: 114 RLIVENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTE 173
Query: 62 -NGWRVELSHNSK 73
NG ++++ +S+
Sbjct: 174 LNGRKLKVFEDSR 186
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+G L + ERD+E FR FG LR V + G+ FVEFDD RDA DA+ L+GK
Sbjct: 3 TRVYIGRLSYQTRERDVERFFRGFGHLREVNLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSH 70
+ G RV + H
Sbjct: 60 DLCGERVIIEH 70
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERD+E FR +G ++ V + G+AFVEFDD RDA DA+ L+GK
Sbjct: 3 TRVFVGGLTYRVRERDIEKFFRKYGRIKEVAM---KNGFAFVEFDDYRDADDAVYELNGK 59
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVYVG L+ V ERDLE F+ FG +R + + G+ FVEFDD RDA DA+ L+G
Sbjct: 2 TSRVYVGRLNYDVRERDLERFFKGFGRIREISIKN---GFGFVEFDDPRDADDAVYELNG 58
Query: 61 KN 62
K+
Sbjct: 59 KD 60
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ A DG
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVW--VARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEF+ RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 69 NLDGCRLRVELAHGGRG 85
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-ARRPPGYAFVEFDDRRDAVDAIRALDGK 61
RVYVGNL P + RD+ED F FG + V + RR P + FVEF+D RDA DA+ DG
Sbjct: 8 RVYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPPFCFVEFEDPRDASDAVHERDGY 67
Query: 62 N 62
N
Sbjct: 68 N 68
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVYVG L+ V ERDLE F+ FG +R + + G+ FVEFDD RDA DA+ L+G
Sbjct: 2 TSRVYVGRLNYDVRERDLERFFKGFGRIREISIKN---GFGFVEFDDPRDADDAVYELNG 58
Query: 61 KN 62
K+
Sbjct: 59 KD 60
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 24/136 (17%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++V+VGNL V RDL D F +G + V + Y FV D +A +A+ AL+ K
Sbjct: 9 TKVFVGNLSKSVQSRDLRDLFEKYGKVLECDVIK---NYGFVHMDKEDEAKEALDALNSK 65
Query: 62 ----NGWRVELS----HNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC-RLR-IGSR 111
+VELS H + G G +G +C++CG GH++R+C R R + R
Sbjct: 66 EFMGTNIKVELSTSRVHKTPGMGSKG----------ECFKCGRQGHWSRDCGRDRSVEDR 115
Query: 112 GLGSGRRR-SPSPRRR 126
G R R P PR R
Sbjct: 116 GRPRERDRYGPPPRDR 131
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 24/126 (19%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIRA 57
R ++G L S+R L D F +G L V + R G+ F+ FD+++ +AI A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 58 LDGKN----GWRVELSHNSKGGGGR---GGRGRGGGED------------LKCYECGEPG 98
++G + V+ + +GG GR G RGR G D C++CG+PG
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGDCFKCGKPG 127
Query: 99 HFAREC 104
HFAREC
Sbjct: 128 HFAREC 133
>gi|395851691|ref|XP_003798386.1| PREDICTED: RNA-binding protein 4 [Otolemur garnettii]
Length = 365
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L +ERDLE FR +G +R V + GY FVEFDD RDA DA+ L+GK
Sbjct: 4 SRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKN---GYGFVEFDDHRDADDAVYELNGK 60
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L+P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDADDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|348565067|ref|XP_003468325.1| PREDICTED: RNA-binding protein 4-like [Cavia porcellus]
Length = 365
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+++G L+P E+D+E F+ FG +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFIGRLNPSAREKDVERFFKGFGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|149725614|ref|XP_001496788.1| PREDICTED: RNA-binding protein 4 isoform 1 [Equus caballus]
gi|338712238|ref|XP_003362679.1| PREDICTED: RNA-binding protein 4 isoform 2 [Equus caballus]
Length = 361
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|323456543|gb|EGB12410.1| hypothetical protein AURANDRAFT_19981, partial [Aureococcus
anophagefferens]
Length = 94
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
+VY+G +E L F+ +G + +WVA+ PPG+AFV F D RDA DA+ LDG
Sbjct: 8 KVYIGGCT-SATEEALSATFQHYGTIDRLWVAKSPPGFAFVWFGDERDAADAVAGLDGTE 66
>gi|431910217|gb|ELK13290.1| RNA-binding protein 4 [Pteropus alecto]
Length = 365
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|296218877|ref|XP_002755613.1| PREDICTED: RNA-binding protein 4 [Callithrix jacchus]
gi|403301167|ref|XP_003941270.1| PREDICTED: RNA-binding protein 4 [Saimiri boliviensis boliviensis]
Length = 364
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|93277122|ref|NP_002887.2| RNA-binding protein 4 isoform 1 [Homo sapiens]
gi|350539417|ref|NP_001233570.1| RNA-binding protein 4 [Pan troglodytes]
gi|332249626|ref|XP_003273959.1| PREDICTED: RNA-binding protein 4 isoform 2 [Nomascus leucogenys]
gi|397517069|ref|XP_003828742.1| PREDICTED: RNA-binding protein 4 isoform 1 [Pan paniscus]
gi|402892712|ref|XP_003909553.1| PREDICTED: RNA-binding protein 4 [Papio anubis]
gi|426369345|ref|XP_004051653.1| PREDICTED: RNA-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|62511089|sp|Q9BWF3.1|RBM4_HUMAN RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=hLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|75077302|sp|Q4R979.1|RBM4_MACFA RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4
gi|12653083|gb|AAH00307.1| RNA binding motif protein 4 [Homo sapiens]
gi|21618467|gb|AAH32735.1| RNA binding motif protein 4 [Homo sapiens]
gi|67967719|dbj|BAE00342.1| unnamed protein product [Macaca fascicularis]
gi|167774193|gb|ABZ92531.1| RNA binding motif protein 4 [synthetic construct]
gi|193783581|dbj|BAG53492.1| unnamed protein product [Homo sapiens]
gi|261859218|dbj|BAI46131.1| RNA binding motif protein 14 [synthetic construct]
gi|343958742|dbj|BAK63226.1| RNA binding motif protein 4 [Pan troglodytes]
gi|355566266|gb|EHH22645.1| RNA-binding motif protein 4 [Macaca mulatta]
gi|380784029|gb|AFE63890.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|383409025|gb|AFH27726.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|384942564|gb|AFI34887.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|410222926|gb|JAA08682.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222932|gb|JAA08685.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222940|gb|JAA08689.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254448|gb|JAA15191.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254452|gb|JAA15193.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410295006|gb|JAA26103.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352741|gb|JAA42974.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352747|gb|JAA42977.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352751|gb|JAA42979.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352753|gb|JAA42980.1| RNA binding motif protein 4 [Pan troglodytes]
Length = 364
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo
sapiens]
Length = 292
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERD+E FR +G ++ V + G+AFVEFDD RDA DA+ L+GK
Sbjct: 3 TRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
>gi|73982920|ref|XP_852303.1| PREDICTED: RNA-binding protein 4 isoform 1 [Canis lupus familiaris]
gi|301784859|ref|XP_002927840.1| PREDICTED: RNA-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
gi|301784861|ref|XP_002927841.1| PREDICTED: RNA-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
gi|410974610|ref|XP_003993736.1| PREDICTED: RNA-binding protein 4 [Felis catus]
gi|281346284|gb|EFB21868.1| hypothetical protein PANDA_017684 [Ailuropoda melanoleuca]
Length = 365
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|291385477|ref|XP_002709280.1| PREDICTED: RNA binding motif protein 4B-like [Oryctolagus
cuniculus]
Length = 365
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL V ++++ED F +G ++ + V R P +AF+EF+D RDA DA+RA DG
Sbjct: 8 QKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAEDAVRARDG 67
Query: 61 K--NGWRVELSHNSKGGGGRG 79
+G R+ + ++G G RG
Sbjct: 68 YEFDGRRIRVEF-TRGVGPRG 87
>gi|349806005|gb|AEQ18475.1| putative zinc finger cchc-type and rna binding motif 1
[Hymenochirus curtipes]
Length = 125
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-----RRPPGYAFVEFDDRRDAVDAIR 56
S VYV NL ++ DL F +G + V + R+ G AFV F D+ A + +R
Sbjct: 10 STVYVSNLSFSLTNNDLHRIFSKYGKVVKVTIVKDKDFRKSKGVAFVLFLDKESAQNCVR 69
Query: 57 ALDGKNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
AL+ K + + + G R R + +CYECG+ GH + C
Sbjct: 70 ALNNKQKASIAIDN---GRATEFIRRRNYTDKSRCYECGDTGHLSYAC 114
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+++G L P E+D+E F+ +G +R + + + G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFIGRLSPTAREKDVERFFKGYGRIRDIDLKK---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F +G + + + RR P ++FVEF+D+RDA DA+R DG
Sbjct: 15 RIYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPPFSFVEFEDKRDAEDAVRGRDGY 74
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 75 DYDGYRLRVE 84
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D+ED F +G + + + RR P ++FVEF+D+RDA DA+R DG
Sbjct: 15 RIYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPPFSFVEFEDKRDAEDAVRGRDGY 74
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 75 DYDGYRLRVE 84
>gi|426252100|ref|XP_004019756.1| PREDICTED: RNA-binding protein 4 isoform 1 [Ovis aries]
Length = 361
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEF+ RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NLDGCRLRVELAH-----GGRG 85
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL V E+++ED F +G ++ V + R P +AFVEF+D RDA DA+RA DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+++Y+GNL + DL+ F +G + + R Y F+ F++ +A A LDG
Sbjct: 7 TKLYIGNLPETCRKADLQKMFEAYGKVIECDIVR---NYCFIHFENPNEAKMAQANLDGV 63
Query: 62 N----GWRVELSHNS-KGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSG 116
+ +VE+SH+ + G GG+G +CY CG+ GH++++C +G G
Sbjct: 64 DFEGVKLKVEMSHSKVRQKPGMGGKG-------ECYRCGKEGHWSKDC-----PKGPSRG 111
Query: 117 RRRSPSPRRR 126
+ R P P R
Sbjct: 112 KPRGPEPPYR 121
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1
[Acyrthosiphon pisum]
Length = 309
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERDLE F+ G ++ + + GYAFVEFDD RDA DA+ L+G+
Sbjct: 5 TRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKN---GYAFVEFDDYRDADDAVYELNGR 61
Query: 62 --NGWRVEL 68
NG RV +
Sbjct: 62 ELNGERVSV 70
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
+ RVE++H GG RG
Sbjct: 69 DFDGCRLRVEIAH----GGRRG 86
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR--RPPGYAFVEFDDRRDAVDAIRAL 58
M+R+Y+GNL V+E+D++D F FG + + + RPP + F+ F D RDA +A+RA
Sbjct: 1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRAR 60
Query: 59 DGKNG----WRVELS 69
DG + RVE+S
Sbjct: 61 DGYDMDGSRLRVEIS 75
>gi|116004239|ref|NP_001070478.1| RNA-binding protein 4 [Bos taurus]
gi|91207336|sp|Q3MHX3.1|RBM4_BOVIN RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4; AltName: Full=RNA-binding motif protein
4a
gi|75775098|gb|AAI04571.1| RNA binding motif protein 4 [Bos taurus]
gi|146231708|gb|ABQ12929.1| RNA binding motif protein 4 [Bos taurus]
gi|296471486|tpg|DAA13601.1| TPA: RNA-binding protein 4 [Bos taurus]
gi|440899389|gb|ELR50692.1| RNA-binding protein 4 [Bos grunniens mutus]
Length = 362
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 144 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 203
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 204 YDYDGYRLRV 213
>gi|158259071|dbj|BAF85494.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPACTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G+L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGHLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
RVY+GNL P + +RDLED F +G + + V R +AF+EFDD RDA DAIR DG
Sbjct: 8 RVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAPFAFIEFDDPRDARDAIRGRDG 66
>gi|282165770|ref|NP_001163955.1| RNA binding motif protein 4 [Rattus norvegicus]
gi|149061994|gb|EDM12417.1| rCG48334, isoform CRA_b [Rattus norvegicus]
Length = 365
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+++++G L + +RDLED F +G L V YAFV+++DRRDA DAI+ +G
Sbjct: 7 AQLFIGRLSKQTRQRDLEDIFTAYGRLSRCDVKYGTGMAYAFVDYEDRRDAEDAIKYENG 66
Query: 61 K----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECR 105
+ VE + + RG ED +CY+C GH+AR+CR
Sbjct: 67 REVCGQSIVVEWARGPR-------RGFVQAED-ECYKCHRSGHWARDCR 107
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG 60
RVY+GNL P + +RDLED F +G + + V R +AF+EFDD RDA DAIR DG
Sbjct: 48 RVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAPFAFIEFDDPRDARDAIRGRDG 106
>gi|178056229|ref|NP_001116659.1| RNA-binding protein 4 [Sus scrofa]
gi|115394772|gb|ABI97180.1| RBM4 [Sus scrofa]
Length = 365
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|410222930|gb|JAA08684.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + R++ED F +G + + + RPPGYAFVEF+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
RVE +H GGRG
Sbjct: 69 KFDGCRLRVEFAH-----GGRG 85
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLED F +G +R V + +AFVEF D RDA DA +L+G+
Sbjct: 43 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYSLNGR 99
Query: 62 N--GWR--VELSHNSK----------GGGGRGGRGR---------------GGGEDLKCY 92
+ G R VE + G G G GR G KCY
Sbjct: 100 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 159
Query: 93 ECGEPGHFAREC 104
CGE GH R C
Sbjct: 160 RCGERGHIERNC 171
>gi|86262144|ref|NP_033058.2| RNA-binding protein 4 [Mus musculus]
gi|62511057|sp|Q8C7Q4.1|RBM4_MOUSE RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=mLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|26340398|dbj|BAC33862.1| unnamed protein product [Mus musculus]
gi|148701113|gb|EDL33060.1| mCG8382, isoform CRA_a [Mus musculus]
gi|219520483|gb|AAI44950.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
SRVY G L ERDLE F FG +R + + R GYAFVEFDD RDA DAI L+G
Sbjct: 3 SRVYAGKLPHDTRERDLERFFEGFGRIREILLRR---GYAFVEFDDYRDAEDAIYELNG 58
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVYVG L R ERD+E FR FG +R V + G+ FVEFDD RDA DAI L+
Sbjct: 1 MTRVYVGRLSYRARERDVEHFFRGFGKIREVTLKN---GFGFVEFDDPRDAEDAIYELNN 57
Query: 61 KN 62
++
Sbjct: 58 RD 59
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA-RRPPGYAFVEFDDRRDAVDAIRALDG- 60
R+YVGNL P + +D++D F FG + V + RR P +AFVEF+D RDA DA+ A DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFEDPRDADDAVHARDGY 68
Query: 61 -KNGWRVELS 69
+G+R+ +
Sbjct: 69 DYDGYRLRVE 78
>gi|403301169|ref|XP_003941271.1| PREDICTED: RNA-binding protein 4B [Saimiri boliviensis boliviensis]
Length = 359
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRTKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|380817026|gb|AFE80387.1| RNA-binding protein 4B [Macaca mulatta]
gi|384949730|gb|AFI38470.1| RNA-binding protein 4B [Macaca mulatta]
gi|410254450|gb|JAA15192.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410295008|gb|JAA26104.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410352743|gb|JAA42975.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L+P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDADDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 18/121 (14%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAI-RALDG 60
++VY+G L + DLE F G + ++ + GY FVEFD+R A +++ + +G
Sbjct: 97 NKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV---GYGFVEFDNREAAEESVAKYHEG 153
Query: 61 ---KNGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGR 117
N RVE+SH GGGR + G+ C++CG+ GH+AREC L +GR
Sbjct: 154 YFMGNKIRVEISH----GGGR--TAKYSGDPGACFKCGQMGHWAREC-----PNHLAAGR 202
Query: 118 R 118
R
Sbjct: 203 R 203
>gi|120577684|gb|AAI30257.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|354496140|ref|XP_003510185.1| PREDICTED: RNA-binding protein 4 [Cricetulus griseus]
gi|344250268|gb|EGW06372.1| RNA-binding protein 4 [Cricetulus griseus]
Length = 360
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R V + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREVNLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D +AI LDG
Sbjct: 129 RIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNAIDKLDGTD 188
Query: 62 -NGWRVELSHN 71
NG +++LS +
Sbjct: 189 LNGRKLKLSED 199
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 47 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 106
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 107 YDYDGYRLRVE 117
>gi|432091077|gb|ELK24289.1| RNA-binding protein 4 [Myotis davidii]
Length = 382
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR--RPPGYAFVEFDDRRDAVDAIRALDGK 61
VYVGNL + ER++ED F +G + S+ + RPP +AFVEF D RDA DA+R DG
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 62 ----NGWRVELSH 70
N RVEL+
Sbjct: 72 DFYGNRLRVELAK 84
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 49 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 108
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 109 YDYDGYRLRVE 119
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA---RRPPGYAFVEFDDRRDAVDAIRALD 59
++YVGNL P RD+E+ F +G + ++ + RR P +AFVEF+D DA DA+R D
Sbjct: 7 KIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 66
Query: 60 GKN----GWRVEL 68
G N RVEL
Sbjct: 67 GYNFDGYALRVEL 79
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 24/122 (19%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK-- 61
++VGN+ + + +L DEF FG + YAF+EF D RDA DA+ L+G+
Sbjct: 3 LFVGNISRSMRQDELHDEFDKFGSCSINFKG----SYAFIEFKDERDAEDALTELNGREF 58
Query: 62 NGWRVELSHNSKGG------------------GGRGGRGRGGGEDLKCYECGEPGHFARE 103
+G R+ + + K G G GRG G + C+ CG+PGHFAR+
Sbjct: 59 SGQRLAIEWSKKSGRFDAANASRGRGRDSRDRGSDRGRGGDRGGNKDCFNCGKPGHFARD 118
Query: 104 CR 105
CR
Sbjct: 119 CR 120
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEF+ RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NFDGCRLRVELAH-----GGRG 85
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF E+ DA A+R+LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 ----GWRVELSHNSKGGGG-----RGGRGRGGG 86
RVE +H + RGGR G G
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRGGRPVGRG 103
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R V + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREVNLKN---GFGFVEFDDPRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D +A+ LDG
Sbjct: 125 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALDKLDGTD 184
Query: 62 -NGWRVELSHN 71
NG +++LS +
Sbjct: 185 LNGRKLKLSED 195
>gi|72012937|ref|XP_780865.1| PREDICTED: uncharacterized protein LOC575368 [Strongylocentrotus
purpuratus]
Length = 200
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVL-RSVWVARRPPGYAFVEFDDRRDAVDAIRALD 59
+++++G L +RD+ED F +G + R YAFV++ D+RDA DAI+ +
Sbjct: 2 TAQLFIGRLSKNTRQRDVEDMFDYYGKMSRCELKFGSGMAYAFVDYVDKRDAEDAIKHEN 61
Query: 60 GK--NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
GK NG + + RG + G ED +CY CG GHFAR+C
Sbjct: 62 GKELNGQSIVVE------WARGPKR--GFEDDECYRCGRRGHFARDC 100
>gi|66911687|gb|AAH97003.1| Sfrs5b protein [Danio rerio]
Length = 164
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
R+++G L+P E+D+E F+ +G +R + + R G+ FVEFDD RDA DA+ LDGK
Sbjct: 5 RIFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEF+ RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NLDGCRLRVELAH-----GGRG 85
>gi|116284263|gb|AAI24193.1| Zgc:55809 protein [Danio rerio]
Length = 284
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVYVG L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYVGKLSHRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRV 66
K+ G RV
Sbjct: 58 KDLCGKRV 65
>gi|410918793|ref|XP_003972869.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Takifugu rubripes]
Length = 216
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NL ++ DL F +G + V + RR G AFV F DR A + +R
Sbjct: 10 STVYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNCVR 69
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFARECRLRI 108
A++ K + + + GR R R + KCYECG+ GH + C I
Sbjct: 70 AINNKQLFSRTVKASIAIDNGRATEFIRRRNYTDKSKCYECGDVGHLSYACPKNI 124
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + E ++ED F +G + + V RPP Y FVEF+ RDA DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 N----GWRVELSHNSKGGGGRG 79
N RVEL+H GGRG
Sbjct: 69 NLDGCRLRVELAH-----GGRG 85
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 36 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 95
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 96 YDYDGYRLRVE 106
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVY+GNL V ERD+E + G +R V + GY FVEFDD RDA D + +DGK
Sbjct: 5 SRVYIGNLPENVRERDVEKFLKDHGRIREVVIKS---GYGFVEFDDPRDADDVVNDMDGK 61
Query: 62 N 62
+
Sbjct: 62 D 62
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR---PPGYAFVEFDDRRDAVDAIRAL 58
S +YVGNL P V E+++ED F +G +R+V V R +AFV+FD RDA +A+R+
Sbjct: 7 STIYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAKEAVRSR 66
Query: 59 DG 60
DG
Sbjct: 67 DG 68
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 47 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 106
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 107 YDYDGYRLRVE 117
>gi|332249630|ref|XP_003273961.1| PREDICTED: RNA-binding protein 4B isoform 1 [Nomascus leucogenys]
Length = 359
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo
sapiens]
Length = 253
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA---RRPPGYAFVEFDDRRDAVDAIRALD 59
++YVGNL P RD+E+ F +G + ++ + RR P +AFVEF+D DA DA+R D
Sbjct: 7 KIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 66
Query: 60 GKN----GWRVEL 68
G N RVEL
Sbjct: 67 GYNFDGYALRVEL 79
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL V E+++ED F +G ++ + + R P +AFVEF+D RDA DA+RA DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>gi|57099639|ref|XP_533216.1| PREDICTED: RNA-binding protein 4B isoform 1 [Canis lupus
familiaris]
Length = 359
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|13899354|ref|NP_113680.1| RNA-binding protein 4B [Homo sapiens]
gi|109105261|ref|XP_001109453.1| PREDICTED: RNA-binding protein 4B-like [Macaca mulatta]
gi|114638751|ref|XP_508578.2| PREDICTED: RNA-binding protein 4B isoform 2 [Pan troglodytes]
gi|297688065|ref|XP_002821512.1| PREDICTED: RNA-binding protein 4B [Pongo abelii]
gi|397517079|ref|XP_003828747.1| PREDICTED: RNA-binding protein 4B [Pan paniscus]
gi|402892714|ref|XP_003909554.1| PREDICTED: RNA-binding protein 4B [Papio anubis]
gi|426369353|ref|XP_004051657.1| PREDICTED: RNA-binding protein 4B isoform 1 [Gorilla gorilla
gorilla]
gi|62511129|sp|Q9BQ04.1|RBM4B_HUMAN RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|13097558|gb|AAH03503.1| RNA binding motif protein 4B [Homo sapiens]
gi|13436323|gb|AAH04951.1| RNA binding motif protein 4B [Homo sapiens]
gi|119594964|gb|EAW74558.1| RNA binding motif protein 4B [Homo sapiens]
gi|193787792|dbj|BAG52995.1| unnamed protein product [Homo sapiens]
gi|208967358|dbj|BAG73693.1| RNA binding motif protein 4B [synthetic construct]
gi|325464201|gb|ADZ15871.1| RNA binding motif protein 4B [synthetic construct]
gi|355566265|gb|EHH22644.1| RNA-binding motif protein 4B [Macaca mulatta]
gi|355751922|gb|EHH56042.1| RNA-binding motif protein 4B [Macaca fascicularis]
Length = 359
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|118380434|ref|XP_001023381.1| hypothetical protein TTHERM_00446190 [Tetrahymena thermophila]
gi|89305148|gb|EAS03136.1| hypothetical protein TTHERM_00446190 [Tetrahymena thermophila
SB210]
Length = 326
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 11 PRVSERDLEDEFRMFGVLRSVWVARRPPG-YAFVEFDDRRDAVDAIR----ALDGKNGWR 65
P V ERD++D F G + + + ++ P Y F+EF+D RDA DA++ +L GK R
Sbjct: 61 PNVEERDVKDLFEKHGKISEIKIKKKGPNCYGFIEFEDSRDAKDALKENGNSLKGKE-LR 119
Query: 66 VELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+E G GGR R G CY CG H A++C
Sbjct: 120 LEF-----GNGGRKKRNEG------CYTCGSLHHIAKDC 147
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 29/130 (22%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG+L R RDLE F +G +R V + +AFV+F D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 N--GWR--VELSHNSKGGG----GRG---GRGR---------------GGGEDLKCYECG 95
+ G R VE + + G GRG G GR G KCY CG
Sbjct: 68 DVDGSRIIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCG 127
Query: 96 EPGHFARECR 105
E GH R C+
Sbjct: 128 ERGHIERNCK 137
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRARENDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 40 YAFVEFDDRRDAVDAIRALDGKN--GWRVELSHN 71
Y FVEFDD RDA DA+ L+GK G RV + H
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 1242
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 34/154 (22%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG + R RDLED F +G +R V + +AFVEF D RDA DA LD +
Sbjct: 24 TRLYVGRVSSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARYHLDDR 80
Query: 62 --NGWR--VELSHN-SKGGGGRG---GRGRGGGEDLKCYECGEPGHFARECRL------- 106
+G R VE + +G GG G+G G +C+ CG GH+AR+C+
Sbjct: 81 EFDGSRLIVEFAKGIPRGPGGSREYMGKGPPPGS-GRCFNCGMDGHWARDCKAGDWKNRC 139
Query: 107 -RIGSRG------------LGSGRR--RSPSPRR 125
R G RG L GR RSPSPRR
Sbjct: 140 YRCGDRGHIERDCQNSPKNLRRGRSYSRSPSPRR 173
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 81 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 140
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 141 YDYDGYRLRVE 151
>gi|301784857|ref|XP_002927839.1| PREDICTED: RNA-binding protein 4B-like [Ailuropoda melanoleuca]
gi|281346283|gb|EFB21867.1| hypothetical protein PANDA_017683 [Ailuropoda melanoleuca]
Length = 359
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 KN--GWRVELS 69
+ G+R+ +
Sbjct: 77 YDYYGYRLRVE 87
>gi|428176969|gb|EKX45851.1| hypothetical protein GUITHDRAFT_108300 [Guillardia theta
CCMP2712]
Length = 126
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK-- 61
V+VGNL P RDL+D FR +G + WVAR+PPG+ FV FDD RDA DA + LDG
Sbjct: 2 VFVGNLPPDAEGRDLQDFFRKYGQINDAWVARKPPGFGFVWFDDDRDARDACQDLDGTDL 61
Query: 62 --NGWRVELS 69
N RVE+S
Sbjct: 62 MGNRVRVEIS 71
>gi|403413643|emb|CCM00343.1| predicted protein [Fibroporia radiculosa]
Length = 559
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VY+G L + DLE F G + ++ + GY FVEF+ R A +++
Sbjct: 161 NKVYIGGLPEHTRKEDLESCFGKIGTIVNIELKV---GYGFVEFESREAAEESVAKYHEG 217
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFARECRLRIGSRGLGSGR 117
N RVELSH GGGR + G+ C++CG+ GH+AREC + +G
Sbjct: 218 YFMGNKIRVELSH----GGGR--TAKYSGDPGACFKCGQVGHWAREC-----PNHMPNGN 266
Query: 118 RRSPSP 123
R P P
Sbjct: 267 HRRPHP 272
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 4 SRVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 60
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M+RVY+G L+ V ERD+E FR +G L+ V + + FVEFDD RDA DA+ L+
Sbjct: 1 MTRVYLGRLNSSVRERDVEKFFRDYGKLKEVTL---KGTFGFVEFDDSRDAEDAVYDLNN 57
Query: 61 KN--GWR--VELSHNSKGGGGRG 79
K G R VE + N + GRG
Sbjct: 58 KELCGDRIIVEFARNRREARGRG 80
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRALDG 60
R+Y+ NL RVS +DL+D R + + ++ G A VEFD + D AI+ LD
Sbjct: 115 RLYINNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQAIVEFDSKDDLRYAIKKLDN 174
Query: 61 K--NGWRVELSHNSKGGGGR 78
NG ++ +S + GG R
Sbjct: 175 TEINGKKITVSRD--GGDSR 192
>gi|324507194|gb|ADY43052.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVYVG L R ERD+E FR +G + V + GYAFVEF D RDA DA+R L+G+
Sbjct: 3 ARVYVGRLSFRAQERDVERFFRGYGHISEVLMKN---GYAFVEFTDYRDADDAVRDLNGR 59
Query: 62 N 62
+
Sbjct: 60 S 60
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|351710884|gb|EHB13803.1| RNA-binding protein 4 [Heterocephalus glaber]
Length = 318
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELSHNSKG 74
+G+R+ + G
Sbjct: 77 YDYDGYRLRVEFPRSG 92
>gi|426252104|ref|XP_004019758.1| PREDICTED: RNA-binding protein 4B isoform 1 [Ovis aries]
Length = 365
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLED F +G +R V + +AFVEF D RDA DA +L+G+
Sbjct: 11 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYSLNGR 67
Query: 62 N--GWR--VELSHNSK----------GGGGRGGRGR---------------GGGEDLKCY 92
+ G R VE + G G G GR G KCY
Sbjct: 68 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
Query: 93 ECGEPGHFAREC 104
CGE GH R C
Sbjct: 128 RCGERGHIERNC 139
>gi|38649360|gb|AAH63235.1| Sfrs5a protein [Danio rerio]
Length = 182
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDYRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
SRVYVG L V ERDLE F+ FG +R + + GY FVEF+D RDA DA+ L+GK
Sbjct: 4 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|354496142|ref|XP_003510186.1| PREDICTED: RNA-binding protein 4B [Cricetulus griseus]
gi|344250269|gb|EGW06373.1| RNA-binding protein 4B [Cricetulus griseus]
Length = 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|149725616|ref|XP_001496839.1| PREDICTED: RNA-binding protein 4B-like [Equus caballus]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|178056236|ref|NP_001116660.1| RNA-binding protein 4B [Sus scrofa]
gi|122131878|sp|Q06AT9.1|RBM4B_PIG RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|115394774|gb|ABI97181.1| RBM30 [Sus scrofa]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|34495359|gb|AAQ73500.1| zinc responsive protein ZD7 [Rattus norvegicus]
Length = 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Monodelphis domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S +YV NLD ++ D+ F FG + V V R+ G AFV + R DA A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 57 ALDGK--NGWRVELSHNSKGG-GGRGGRGRGGGEDLKCYECGEPGHFAREC 104
++D K NG ++ +S + G + R + +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYEC 167
>gi|410974612|ref|XP_003993737.1| PREDICTED: RNA-binding protein 4B [Felis catus]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|55926188|ref|NP_001007015.2| RNA-binding protein 4B [Rattus norvegicus]
gi|62510948|sp|Q64LC9.2|RBM4B_RAT RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30;
AltName: Full=Zinc-responsive protein ZD7
gi|55562771|gb|AAH86416.1| RNA binding motif protein 4B [Rattus norvegicus]
gi|149061999|gb|EDM12422.1| rCG48244, isoform CRA_a [Rattus norvegicus]
gi|149062000|gb|EDM12423.1| rCG48244, isoform CRA_a [Rattus norvegicus]
Length = 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|344295811|ref|XP_003419604.1| PREDICTED: RNA-binding protein 4B-like [Loxodonta africana]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|27754120|ref|NP_079993.2| RNA-binding protein 4B [Mus musculus]
gi|62511125|sp|Q8VE92.1|RBM4B_MOUSE RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|18044496|gb|AAH19488.1| RNA binding motif protein 4B [Mus musculus]
gi|148701119|gb|EDL33066.1| mCG8380, isoform CRA_a [Mus musculus]
gi|148701120|gb|EDL33067.1| mCG8380, isoform CRA_a [Mus musculus]
Length = 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|126723790|ref|NP_001075548.1| RNA-binding protein 4 [Oryctolagus cuniculus]
gi|62511088|sp|Q9BDY9.1|RBM4_RABIT RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
AltName: Full=RNA-binding motif protein 4
gi|13182931|gb|AAK14991.1|AF233063_1 RNA-binding protein lark [Oryctolagus cuniculus]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG+L R ERD+E F+ +G +R + + G+ FVEF+D RDA DAI L+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKN---GFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D A+ LDG
Sbjct: 105 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 164
Query: 62 -NGWRVELSHN 71
NG R+ L+ +
Sbjct: 165 LNGRRIRLTED 175
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo
sapiens]
Length = 142
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|348565071|ref|XP_003468327.1| PREDICTED: RNA-binding protein 4B-like [Cavia porcellus]
Length = 358
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2
[Desmodus rotundus]
Length = 207
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLE F +G +R V + R YAFVEF D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYNLDGR 67
Query: 62 --NGWR--VELSHNSKGGGGRG-----------GRGRGGGEDLKCYECGEPGHFARECR 105
+G R VE + G G GRG G +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRLIVEFAKGVPRGSREGGGGRDRDREYMGRGPPPGS-GRCFNCGIDGHWARDCK 125
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2
[Canis lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla
gorilla gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo
sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo
sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|431910216|gb|ELK13289.1| RNA-binding protein 4B [Pteropus alecto]
Length = 359
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|114052178|ref|NP_001039393.1| RNA-binding protein 4B [Bos taurus]
gi|86438058|gb|AAI12498.1| RNA binding motif protein 4B [Bos taurus]
gi|296471585|tpg|DAA13700.1| TPA: RNA binding motif protein 4B [Bos taurus]
Length = 359
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like
[Taeniopygia guttata]
Length = 277
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG+L R ERD+E F+ +G +R + + G+ FVEF+D RDA DAI L+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHL---KNGFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D A+ LDG
Sbjct: 106 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 165
Query: 62 -NGWRVELSHN 71
NG R++L+ +
Sbjct: 166 LNGRRIKLTED 176
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG+L R ERD+E F+ +G +R + + G+ FVEF+D RDA DAI L+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHL---KNGFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D A+ LDG
Sbjct: 105 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG R++L
Sbjct: 165 LNGRRIKL 172
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPG--YAFVEFDDRRDAVDAIRALDG 60
RVYVGNL +R++E+EF FG ++ V R G +AFVEF+D RDA DAI+ DG
Sbjct: 9 RVYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDG 68
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RVY+G L ERD+E F+ +G LR V + GY FVEF+D RDA DA+ L+GK
Sbjct: 242 TRVYIGRLSHHARERDVERFFKGYGRLRDVMLKN---GYGFVEFEDYRDADDAVYELNGK 298
Query: 62 N--GWRVELSHNSKGGGGRG 79
+ G RV + H GG RG
Sbjct: 299 DLAGERVIVEHAR--GGPRG 316
>gi|432091076|gb|ELK24288.1| RNA-binding protein 4B [Myotis davidii]
Length = 357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|336374485|gb|EGO02822.1| hypothetical protein SERLA73DRAFT_70307 [Serpula lacrymans var.
lacrymans S7.3]
Length = 520
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++VYVG L + DL F G + +V + GY FVEFD + A +++ +
Sbjct: 143 NKVYVGGLPEHTRQEDLRSCFGKIGSIVNVELKV---GYGFVEFDTKDAAEESVAKYNEG 199
Query: 62 ----NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
N RVE+SH GGGR + G+ C++CG+ GH+AREC
Sbjct: 200 HFMGNKIRVEISH----GGGR--TSKHSGDPGACFKCGQTGHWAREC 240
>gi|145518856|ref|XP_001445300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412744|emb|CAK77903.1| unnamed protein product [Paramecium tetraurelia]
Length = 454
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
Query: 14 SERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK--NGWRVELSHN 71
E+ ++D F+ +G ++ V Y+FV F +A DA++AL+G+ NG ++++
Sbjct: 21 DEKGIKDIFKKYGNIKDVAYK---GSYSFVTFQSESEAEDALKALNGQTINGQKLKVD-- 75
Query: 72 SKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
R GR G E+ +C++CG+ GH+AREC
Sbjct: 76 --VVDNRKGRRSGPQENDECFKCGKGGHWAREC 106
>gi|395851687|ref|XP_003798384.1| PREDICTED: RNA-binding protein 4B [Otolemur garnettii]
Length = 359
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L RV ERDLE F+ G ++ + + GYAFVEFDD RDA DA+ L+G+
Sbjct: 5 TRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKN---GYAFVEFDDYRDADDAVYELNGR 61
Query: 62 --NGWRVELS 69
NG RV +
Sbjct: 62 ELNGERVSVE 71
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALD 59
S +YVGNL + E ++ED F +G + + + RPPGY F+EFD+ RDA DAIR D
Sbjct: 6 STIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIRGRD 65
Query: 60 GK----NGWRVELSH 70
G + RVE +H
Sbjct: 66 GYKFDGHRLRVERAH 80
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSR+++G L V E D+E R +G +R + + R GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRIFLGRLPRDVRESDVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNG 57
Query: 61 KN--GWRVELSHNSKGGGGRGGRGRGGGEDLKCY 92
++ G RV + + +G R GGG D + +
Sbjct: 58 RDLIGERVVVEFS------KGRRSEGGGRDRRDF 85
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|444510189|gb|ELV09524.1| RNA-binding protein 4B [Tupaia chinensis]
Length = 357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + ++L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNQELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1
[Oreochromis niloticus]
Length = 390
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSV--WVARRPPGYAFVEFDDRRDAVDAIRALD 59
R+YVGNL + R++ED F G ++ + + RPP YAF++F+D RDA DAI A D
Sbjct: 3 KRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEARD 62
Query: 60 G 60
G
Sbjct: 63 G 63
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 36/136 (26%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIRA 57
R ++GNL ++ L+D F FG L V + R G+ FV FD+++ DAI
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 58 LDGKN--GWRVELSHNSKGGGGR---------------------------GGRGRGGGED 88
++G + G + + G GR RG GGG D
Sbjct: 68 MNGLDLDGRAITVDKAQPQGPGRDRNGDRDYDRDRGSRYDRGRDFGGGGRAPRGSGGGGD 127
Query: 89 LKCYECGEPGHFAREC 104
CY+CG+PGHFAREC
Sbjct: 128 --CYKCGKPGHFAREC 141
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 49 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 108
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 109 YDYDGYRLRVE 119
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 264
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFV+FDD RDA DA+ DG
Sbjct: 16 RIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|221132895|ref|XP_002159009.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Hydra magnipapillata]
Length = 244
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYVGNL ++ D+ F FG + V V +R G AFV+F +R A++A +
Sbjct: 10 STVYVGNLPFSLTNNDIHKVFEKFGRIAKVTVLRDRVSRESKGVAFVQFIERASAINACK 69
Query: 57 ALDGKNGWRVELSHNSKGGGGRGG---RGRGGGEDLKCYECGEPGHFAREC 104
++ K + ++ GR + + + CYECGE GH + +C
Sbjct: 70 EVNQKQLFERKIKCVIAKDNGRAAEFIKKKEYPDKSTCYECGEEGHLSYKC 120
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLED F +G +R V + +AF+EF D RDA +A L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKH---DFAFIEFSDPRDADEARYYLNGR 67
Query: 62 --NGWRVELSHNSKGGGGRG--------GRGRGGGEDLKCYECGEPGHFARECR 105
+G R+ + G G GRG G +C+ CG GH+AR+C+
Sbjct: 68 DLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGS-GRCFNCGNDGHWARDCK 120
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKV 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKV 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+R+YVG L R RDLED F +G +R V + +AF+EF D RDA +A L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKH---DFAFIEFSDPRDADEARYYLNGR 67
Query: 62 --NGWRVELSHNSKGGGGRG--------GRGRGGGEDLKCYECGEPGHFARECR 105
+G R+ + G G GRG G +C+ CG GH+AR+C+
Sbjct: 68 DLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGS-GRCFNCGNDGHWARDCK 120
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKV 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1
[Oryzias latipes]
Length = 372
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS 72
K G RV + H
Sbjct: 58 KELCGERVIVEHTK 71
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2
[Oreochromis niloticus]
Length = 386
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|440804043|gb|ELR24926.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 263
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 39 GYAFVEFDDRRDAVDAIRALDGKN--GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGE 96
G+ FVE++DRRDA DA+R LDG + G R+ + +G R G C+ CGE
Sbjct: 16 GFGFVEYEDRRDAEDAVRDLDGAHLMGKRIAVE------WAKGERRATGTRSDACFRCGE 69
Query: 97 PGHFAREC 104
GH+AR+C
Sbjct: 70 EGHWARDC 77
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L P ERD+E F+ +G +R + + G+ FVEFDD RDA DA+ L+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDYRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL R+S +DL+D R G + V R VEF D +AI LDG
Sbjct: 114 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTD 173
Query: 62 -NGWRVELSHNSK 73
NG +++L + K
Sbjct: 174 LNGRKLKLYEDRK 186
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 14/90 (15%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL V E+DLED F +G +R + + R +AFV F+D RDA DAI G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71
Query: 61 KNGW-------RVEL--SHNSKGGGGRGGR 81
+NG+ RVE ++ S+GG RGGR
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRGGR 101
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV+VG L P ERD+E F+ +G +R + + G+ FVEF+D RDA DA+ L+GK
Sbjct: 5 RVFVGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFEDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
R+ V NL RVS +DL+D R G + V R P VEF D A+ LDG
Sbjct: 108 RLIVENLSSRVSWQDLKDFMRKAGEVTFVDAHRNNPNEGVVEFASSSDMKSAMDKLDGSE 167
Query: 62 -NGWRVEL 68
NG R++L
Sbjct: 168 LNGRRIKL 175
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 14/90 (15%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL V E+DLED F +G +R + + R +AFV F+D RDA DAI G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71
Query: 61 KNGW-------RVEL--SHNSKGGGGRGGR 81
+NG+ RVE ++ S+GG RGGR
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRGGR 101
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AF+EF+D RDA DA+ DG
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 75 YDYDGYRLRVE 85
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F FG +R + + R P +AFVEF+D RD+ DA+ DG
Sbjct: 16 RIYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDG 75
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 76 YDYDGYRLRVE 86
>gi|395544458|ref|XP_003774127.1| PREDICTED: RNA-binding protein 4 [Sarcophilus harrisii]
Length = 364
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + +L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNLELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2
[Oryzias latipes]
Length = 384
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS 72
K G RV + H
Sbjct: 58 KELCGERVIVEHTK 71
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M RVY+G L + ERD+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLK---NGYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH------NSKGGGGRGGRG 82
K+ G RV + H +S G GR G G
Sbjct: 58 KDLCGERVIVEHARGPRRDSSYGSGRSGYG 87
>gi|149491652|ref|XP_001512914.1| PREDICTED: RNA-binding protein 4B-like isoform 1 [Ornithorhynchus
anatinus]
Length = 365
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
++++VGN+ P + +L +F +G + + + YAFV + DAV+AIR LD
Sbjct: 78 TKLHVGNISPTCTNMELRAKFEEYGPVIECDIVK---DYAFVHMERAEDAVEAIRGLDNT 134
Query: 62 --NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
G R+ + ++ R G G+ CY CG+ GH+++EC
Sbjct: 135 EFQGKRMHVQLST----SRLRTAPGMGDQSGCYRCGKEGHWSKEC 175
>gi|72062514|ref|XP_796219.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Strongylocentrotus purpuratus]
Length = 233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
S VYV NL ++ DL+ F FG + V + R+ G AFV F +R A +I+
Sbjct: 10 STVYVSNLPFTLTNNDLQQIFGRFGQVARVTIVKDKETRKSKGLAFVLFVERDSAYKSIK 69
Query: 57 ALDGKN----GWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+L+G+ W+V ++ ++ G R R + +CYECGE GH + C
Sbjct: 70 SLNGRELFGRKWKVSIADDN-GRAADFIRRRNYPDKSRCYECGEFGHLSYSC 120
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L+P E+D+E F+ +G +R + + R G+ FVEF+D RDA DA+ LDGK
Sbjct: 8 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKE 64
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 65 LCSERVTIEH 74
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDG 76
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 14/90 (15%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL V E+DLED F +G +R + + R +AFV F+D RDA DAI G+
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---GR 191
Query: 62 NGW-------RVEL--SHNSKGGGGRGGRG 82
NG+ RVE ++ S+GG RGGR
Sbjct: 192 NGYDYGQCRLRVEFPRTYGSRGGWPRGGRN 221
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AF+EF+D RDA DA+ DG
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 75 YDYDGYRLRVE 85
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 244
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AF+EF+D RDA DA+ DG
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 75 YDYDGYRLRVE 85
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP---PGYAFVEFDDRRDAVDAIRALD 59
RVYVGNL V E+DL D F +G + V + R P +AFVEF+D RDA DA++ D
Sbjct: 10 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 69
Query: 60 GK--NGWRVELSHNSKGGG 76
G +G+R+ + G G
Sbjct: 70 GHEFDGYRIRVEFPRGGSG 88
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M RVY+G L R ++RD+E FR +G L V + G+ FV+F D+RDA DA+ L+G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57
Query: 61 KN--GWRVELS--------HNSKGGGGRGGRG---RGGGE 87
K+ G RV L + + GGG GR R GGE
Sbjct: 58 KDLCGERVILEFPRRKVGYNEERSGGGYRGREPTFRRGGE 97
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVA--RRPPGYAFVEFDDRRDAVDAIRAL 58
M+RV+VGNL V ER+L D+F +G + SV + RPP +AF+ +++ +DA DA+R++
Sbjct: 1 MARVFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSM 60
Query: 59 D----GKNGWRVELSHNSKGGGGRGGRGR 83
+ G + RVE+S RG + R
Sbjct: 61 NNTTFGGSRIRVEMSRGIDDARPRGTQYR 89
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo
sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVELS 69
+G+R+ +
Sbjct: 77 YDYDGYRLRVE 87
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L+P E+D+E F+ +G +R + + R G+ FVEF+D RDA DA+ LDGK
Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGXIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARR--PPGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
>gi|431904517|gb|ELK09900.1| Splicing factor, arginine/serine-rich 5 [Pteropus alecto]
Length = 223
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
RV++G L+P E+D+E F+ +G +R + + R G+ FVEF+D RDA DA+ LDGK
Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRP--PGYAFVEFDDRRDAVDAIRALDG 60
R+YVGNL P + +D+ED F +G +R + + R P +AFVEF+D RDA D + DG
Sbjct: 69 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDG 128
Query: 61 KN--GWRVELS 69
+ G+R+ +
Sbjct: 129 YDYYGYRLRVE 139
>gi|256087165|ref|XP_002579746.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360042833|emb|CCD78243.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 279
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62
++Y+G L + + DL E G L VWVAR PPG+AF E+ DA A+R+L+G N
Sbjct: 11 KLYIGGLVENILKDDLVRELSKCGELVDVWVARNPPGFAFAEYVRSSDAEKAVRSLNGVN 70
Query: 63 ----GWRVELSH 70
RVE +H
Sbjct: 71 VCGSRIRVEFAH 82
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+RV+VG L+ V ERDLE F+ +G + V + GY FVEFDD RDA DA+ L+GK
Sbjct: 3 TRVFVGRLNYDVRERDLEKFFKGYGRIGEVLL---KNGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 62 N--GWR--VELSHNSKGGGGRG 79
G R VEL+ + G G G
Sbjct: 60 KLMGERISVELARGIRRGPGTG 81
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3
[Oryzias latipes]
Length = 388
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
MSRVY+G L R E+D+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS 72
K G RV + H
Sbjct: 58 KELCGERVIVEHTK 71
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
M RVY+G L + ERD+E F+ +G + V + GY FVEFDD RDA DA+ L+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWVAR-RPPGYAFVEFDDRRDAVDAIRALDG 60
+VYVGNL V ++++ED F +G ++ + + R P +AFVEF+D RDA DA+RA DG
Sbjct: 10 QKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 69
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 26/128 (20%)
Query: 2 SRVYVGNLDPRVSERDLEDEFRMFGVLRSVWV-----ARRPPGYAFVEFDDRRDAVDAIR 56
+R++VG L ++ER LE+ F FG + V RP G+ F+ F DRR DAIR
Sbjct: 3 NRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAIR 62
Query: 57 ALDGKN-GWRV--------ELSHNSKGGGGRGG-----------RGRGGGEDLKCYECGE 96
+ G++ G RV ++ + G RGG R G+D +C++CG
Sbjct: 63 EMHGRDFGDRVISVNKAQPKMGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQD-ECFKCGR 121
Query: 97 PGHFAREC 104
GH+AR+C
Sbjct: 122 SGHWARDC 129
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG-VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK- 61
+++G L R LED F +G ++R Y FV+++DRRDA DA++ +G+
Sbjct: 9 LFIGRLSKNTQPRHLEDVFEPYGRLIRCDVKYGAEMAYGFVDYEDRRDAEDALKYENGRE 68
Query: 62 ---NGWRVELSHNSKGGGGRGGRGRGGGEDLKCYECGEPGHFAREC 104
+ RVE + + RGGG +CY C GHFAR+C
Sbjct: 69 ICGSSIRVEWAKGNPRRPYAASSNRGGGMYDECYRCHRTGHFARDC 114
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 4 VYVGNLDPRVSERDLEDEFRMFG--VLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK 61
+YVGNL + ER+++D F +G V + + RPPG+AFVEF+D DA DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFED-ADAEDAIYGRDGY 67
Query: 62 N----GWRVELSHNSKG 74
N RVEL+H +G
Sbjct: 68 NFDGHRLRVELAHGGRG 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.141 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,880,393,792
Number of Sequences: 23463169
Number of extensions: 180141336
Number of successful extensions: 1007372
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 10762
Number of HSP's that attempted gapping in prelim test: 967873
Number of HSP's gapped (non-prelim): 35450
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)