Query 041611
Match_columns 249
No_of_seqs 213 out of 1408
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 15:08:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041611.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041611hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.9E-43 1.3E-47 316.7 19.8 229 7-246 12-250 (454)
2 2acv_A Triterpene UDP-glucosyl 100.0 1.1E-33 3.7E-38 256.4 20.1 225 7-246 8-249 (463)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.5E-34 2.2E-38 259.1 17.1 235 1-246 1-260 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3E-33 1E-37 253.1 18.9 235 1-246 1-248 (456)
5 2vch_A Hydroquinone glucosyltr 100.0 1.2E-31 4.2E-36 244.0 21.0 229 6-247 4-245 (480)
6 2iya_A OLEI, oleandomycin glyc 99.7 3.5E-18 1.2E-22 152.3 9.2 128 7-145 11-141 (424)
7 4amg_A Snogd; transferase, pol 99.6 8.8E-17 3E-21 141.6 5.1 137 1-145 13-160 (400)
8 1iir_A Glycosyltransferase GTF 99.5 1.8E-14 6.2E-19 128.1 9.8 123 9-144 1-127 (415)
9 2iyf_A OLED, oleandomycin glyc 99.5 3.9E-14 1.3E-18 126.1 9.3 132 1-144 1-135 (430)
10 3ia7_A CALG4; glycosysltransfe 99.5 8.5E-14 2.9E-18 122.3 8.4 124 8-142 4-132 (402)
11 3rsc_A CALG2; TDP, enediyne, s 99.4 2.2E-13 7.4E-18 120.6 8.4 126 7-143 19-149 (415)
12 1rrv_A Glycosyltransferase GTF 99.4 6.4E-13 2.2E-17 118.0 8.3 124 9-144 1-128 (416)
13 2p6p_A Glycosyl transferase; X 99.2 1.1E-11 3.9E-16 108.5 7.5 124 9-144 1-138 (384)
14 3oti_A CALG3; calicheamicin, T 99.2 5.4E-11 1.8E-15 104.8 9.9 127 7-143 19-160 (398)
15 2yjn_A ERYCIII, glycosyltransf 99.2 8.2E-12 2.8E-16 111.7 4.2 131 7-144 19-175 (441)
16 3h4t_A Glycosyltransferase GTF 99.1 8E-11 2.7E-15 104.2 8.7 124 9-145 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.1 5.1E-11 1.7E-15 104.9 5.6 131 6-143 13-153 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.1 1.9E-10 6.4E-15 100.9 7.2 128 9-143 2-144 (391)
19 3otg_A CALG1; calicheamicin, T 99.0 9E-10 3.1E-14 97.0 7.5 128 6-143 18-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.5 8.8E-07 3E-11 77.3 10.4 115 9-140 3-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.7 0.00036 1.2E-08 59.7 11.0 117 9-142 7-127 (364)
22 3fro_A GLGA glycogen synthase; 95.8 0.12 4.1E-06 44.7 12.3 39 8-46 2-45 (439)
23 3c48_A Predicted glycosyltrans 95.6 0.071 2.4E-06 46.4 10.1 120 7-143 19-154 (438)
24 2r60_A Glycosyl transferase, g 95.4 0.078 2.7E-06 47.3 9.6 122 8-143 7-152 (499)
25 2jjm_A Glycosyl transferase, g 93.4 1.1 3.6E-05 38.3 12.0 114 8-143 15-134 (394)
26 2gek_A Phosphatidylinositol ma 92.5 0.29 9.8E-06 41.8 7.1 115 7-143 19-139 (406)
27 3okp_A GDP-mannose-dependent a 92.1 0.68 2.3E-05 39.2 9.0 108 7-141 3-116 (394)
28 2wqk_A 5'-nucleotidase SURE; S 89.6 1.5 5.2E-05 35.7 8.2 96 25-143 17-128 (251)
29 1v4v_A UDP-N-acetylglucosamine 89.6 1.1 3.7E-05 38.0 7.8 113 8-141 5-122 (376)
30 2iw1_A Lipopolysaccharide core 88.1 2 6.7E-05 36.0 8.4 51 10-67 2-55 (374)
31 3s28_A Sucrose synthase 1; gly 87.8 1.4 4.9E-05 42.1 7.9 106 27-141 318-437 (816)
32 1vgv_A UDP-N-acetylglucosamine 85.7 1.6 5.6E-05 36.8 6.5 112 10-142 2-118 (384)
33 2phj_A 5'-nucleotidase SURE; S 82.0 6.6 0.00023 31.9 8.2 26 25-51 17-42 (251)
34 2iuy_A Avigt4, glycosyltransfe 79.4 2.2 7.5E-05 35.4 4.8 28 19-46 30-57 (342)
35 3vue_A GBSS-I, granule-bound s 79.2 2.1 7.1E-05 38.8 4.9 45 1-45 1-52 (536)
36 3hbm_A UDP-sugar hydrolase; PS 79.0 4.2 0.00015 33.6 6.3 87 17-143 13-102 (282)
37 2x0d_A WSAF; GT4 family, trans 78.2 1.6 5.5E-05 38.0 3.7 41 6-46 44-89 (413)
38 4hwg_A UDP-N-acetylglucosamine 74.3 5 0.00017 34.6 5.7 42 98-141 81-124 (385)
39 2x6q_A Trehalose-synthase TRET 72.8 5.2 0.00018 34.1 5.5 41 7-47 39-81 (416)
40 1l5x_A SurviVal protein E; str 69.9 15 0.0005 30.4 7.3 26 25-51 16-41 (280)
41 2yxb_A Coenzyme B12-dependent 66.6 6.2 0.00021 29.6 4.1 42 6-47 16-57 (161)
42 1id1_A Putative potassium chan 65.1 7.8 0.00027 28.2 4.4 33 8-45 3-35 (153)
43 2i2x_B MTAC, methyltransferase 64.0 11 0.00039 30.4 5.5 40 7-46 122-161 (258)
44 1y80_A Predicted cobalamin bin 64.0 9.9 0.00034 29.5 5.0 41 7-47 87-127 (210)
45 1ccw_A Protein (glutamate muta 63.7 11 0.00039 27.2 4.9 39 7-45 2-40 (137)
46 1rzu_A Glycogen synthase 1; gl 63.6 6.2 0.00021 34.4 4.1 37 10-46 2-44 (485)
47 2qzs_A Glycogen synthase; glyc 60.3 7.7 0.00026 33.9 4.1 37 10-46 2-44 (485)
48 3tov_A Glycosyl transferase fa 58.9 49 0.0017 27.7 8.8 56 7-66 7-65 (349)
49 1mvl_A PPC decarboxylase athal 57.8 13 0.00044 29.2 4.6 44 7-52 18-61 (209)
50 3dzc_A UDP-N-acetylglucosamine 57.3 13 0.00043 32.0 4.9 41 99-141 99-142 (396)
51 3ezx_A MMCP 1, monomethylamine 55.9 16 0.00053 28.8 4.8 45 6-50 90-134 (215)
52 1psw_A ADP-heptose LPS heptosy 53.0 36 0.0012 28.0 7.0 42 10-51 2-45 (348)
53 3qjg_A Epidermin biosynthesis 51.4 19 0.00066 27.4 4.5 43 9-52 6-48 (175)
54 2q5c_A NTRC family transcripti 50.9 26 0.00089 27.0 5.3 36 113-151 142-177 (196)
55 2r8r_A Sensor protein; KDPD, P 50.0 31 0.0011 27.4 5.7 40 7-46 5-44 (228)
56 3ot5_A UDP-N-acetylglucosamine 49.3 22 0.00075 30.6 5.1 41 99-141 102-145 (403)
57 2hy7_A Glucuronosyltransferase 49.3 13 0.00045 31.9 3.7 37 7-45 13-52 (406)
58 3zqu_A Probable aromatic acid 47.4 27 0.00094 27.3 4.9 42 8-50 4-45 (209)
59 1g5t_A COB(I)alamin adenosyltr 46.9 26 0.00089 27.2 4.7 39 6-44 26-64 (196)
60 3lqk_A Dipicolinate synthase s 46.3 32 0.0011 26.7 5.2 43 7-50 6-49 (201)
61 3lyu_A Putative hydrogenase; t 44.0 18 0.00063 26.1 3.3 34 9-45 19-52 (142)
62 1lss_A TRK system potassium up 42.0 29 0.00099 24.1 4.1 32 8-44 4-35 (140)
63 3kkj_A Amine oxidase, flavin-c 41.7 16 0.00054 28.0 2.8 19 26-44 15-33 (336)
64 3imk_A Putative molybdenum car 41.6 1.1E+02 0.0036 22.8 7.8 95 113-241 7-106 (158)
65 3to5_A CHEY homolog; alpha(5)b 40.7 36 0.0012 24.3 4.4 32 113-144 57-97 (134)
66 3vot_A L-amino acid ligase, BL 40.4 1.7E+02 0.0058 24.8 10.9 34 102-137 66-101 (425)
67 2lpm_A Two-component response 40.3 26 0.00087 24.8 3.4 34 105-140 47-85 (123)
68 1g63_A Epidermin modifying enz 39.0 33 0.0011 26.1 4.1 42 9-51 3-44 (181)
69 3gl9_A Response regulator; bet 38.2 54 0.0019 22.0 5.0 32 113-144 46-86 (122)
70 2pju_A Propionate catabolism o 38.1 45 0.0015 26.3 4.9 39 101-142 141-180 (225)
71 3zzm_A Bifunctional purine bio 35.8 50 0.0017 29.6 5.2 107 1-122 1-111 (523)
72 1sbz_A Probable aromatic acid 34.9 51 0.0017 25.5 4.6 41 10-51 2-43 (197)
73 4b4o_A Epimerase family protei 34.6 21 0.00072 28.8 2.5 26 17-44 7-32 (298)
74 3bul_A Methionine synthase; tr 34.4 49 0.0017 30.2 5.1 43 7-49 97-139 (579)
75 4g6h_A Rotenone-insensitive NA 34.2 17 0.0006 32.3 2.1 35 6-45 40-74 (502)
76 3lrx_A Putative hydrogenase; a 33.8 22 0.00076 26.2 2.3 36 9-47 24-59 (158)
77 1qzu_A Hypothetical protein MD 33.7 41 0.0014 26.2 3.9 45 7-52 18-63 (206)
78 1pq4_A Periplasmic binding pro 33.2 70 0.0024 26.1 5.5 48 103-152 229-278 (291)
79 2iya_A OLEI, oleandomycin glyc 32.5 17 0.00057 31.1 1.6 32 209-246 209-240 (424)
80 2ejb_A Probable aromatic acid 32.0 62 0.0021 24.8 4.7 42 9-51 2-43 (189)
81 3t6k_A Response regulator rece 31.5 85 0.0029 21.4 5.1 37 106-144 43-88 (136)
82 2gk4_A Conserved hypothetical 31.3 35 0.0012 27.2 3.2 26 19-46 28-53 (232)
83 3mcu_A Dipicolinate synthase, 31.0 44 0.0015 26.1 3.7 40 8-48 5-45 (207)
84 3qxc_A Dethiobiotin synthetase 30.8 63 0.0021 25.7 4.7 35 9-43 21-57 (242)
85 2g1u_A Hypothetical protein TM 30.4 66 0.0023 23.1 4.5 33 8-45 19-51 (155)
86 1kjn_A MTH0777; hypotethical p 30.3 80 0.0027 23.4 4.7 41 9-49 7-49 (157)
87 3pdi_B Nitrogenase MOFE cofact 29.6 50 0.0017 29.1 4.2 32 8-42 169-202 (458)
88 3m6m_D Sensory/regulatory prot 29.4 69 0.0024 22.2 4.4 36 106-143 53-99 (143)
89 3e2i_A Thymidine kinase; Zn-bi 28.0 2.2E+02 0.0075 22.3 7.6 38 9-46 28-66 (219)
90 1p3y_1 MRSD protein; flavoprot 26.5 56 0.0019 25.1 3.5 43 7-50 7-49 (194)
91 3f6p_A Transcriptional regulat 26.5 1.1E+02 0.0039 20.1 5.0 37 106-144 41-83 (120)
92 2vqe_B 30S ribosomal protein S 26.2 2.6E+02 0.0087 22.5 10.8 33 112-144 157-191 (256)
93 3cg0_A Response regulator rece 25.4 1.1E+02 0.0038 20.6 4.9 32 113-144 54-92 (140)
94 3mc3_A DSRE/DSRF-like family p 25.0 1E+02 0.0034 21.8 4.5 38 9-46 16-56 (134)
95 1p9o_A Phosphopantothenoylcyst 24.8 40 0.0014 28.2 2.5 26 20-47 65-90 (313)
96 2rjn_A Response regulator rece 24.4 1.5E+02 0.005 20.5 5.5 33 113-145 51-90 (154)
97 3c3m_A Response regulator rece 24.3 1.5E+02 0.0052 20.0 5.4 36 106-143 42-86 (138)
98 2gt1_A Lipopolysaccharide hept 23.5 50 0.0017 27.0 2.9 43 10-52 2-46 (326)
99 3oz2_A Digeranylgeranylglycero 23.2 47 0.0016 27.5 2.8 18 26-43 17-34 (397)
100 3beo_A UDP-N-acetylglucosamine 23.1 57 0.0019 26.8 3.3 38 8-46 8-47 (375)
101 3llv_A Exopolyphosphatase-rela 22.6 57 0.0019 22.8 2.8 32 8-44 6-37 (141)
102 3f67_A Putative dienelactone h 22.5 1.4E+02 0.0048 22.1 5.3 34 11-44 34-67 (241)
103 1dbw_A Transcriptional regulat 21.9 1.6E+02 0.0054 19.4 5.0 32 113-144 47-85 (126)
104 1u7z_A Coenzyme A biosynthesis 21.9 63 0.0022 25.5 3.1 25 19-45 33-57 (226)
105 2qr3_A Two-component system re 21.8 1.5E+02 0.005 19.9 4.9 38 105-144 41-90 (140)
106 3pdi_A Nitrogenase MOFE cofact 21.8 74 0.0025 28.2 3.8 35 102-141 392-426 (483)
107 3s40_A Diacylglycerol kinase; 21.7 1.4E+02 0.0047 24.4 5.3 47 1-47 3-50 (304)
108 1mio_B Nitrogenase molybdenum 21.5 98 0.0033 27.1 4.6 18 25-42 184-201 (458)
109 3fgn_A Dethiobiotin synthetase 21.3 1.7E+02 0.0058 23.2 5.6 34 10-43 27-62 (251)
110 3fwz_A Inner membrane protein 20.8 65 0.0022 22.7 2.8 34 7-45 6-39 (140)
111 3gi1_A LBP, laminin-binding pr 20.8 1.4E+02 0.0047 24.3 5.1 22 22-44 19-40 (286)
112 2qxy_A Response regulator; reg 20.7 1.7E+02 0.0058 19.7 5.1 31 113-144 48-85 (142)
113 2prs_A High-affinity zinc upta 20.7 1.6E+02 0.0054 23.8 5.4 31 113-143 223-255 (284)
114 3oy2_A Glycosyltransferase B73 20.5 85 0.0029 26.2 3.9 37 10-47 2-41 (413)
115 3h1g_A Chemotaxis protein CHEY 20.4 1.9E+02 0.0066 19.1 5.2 32 113-144 51-91 (129)
116 3gt7_A Sensor protein; structu 20.4 1.5E+02 0.0052 20.6 4.8 31 113-143 51-90 (154)
117 3p9x_A Phosphoribosylglycinami 20.3 1E+02 0.0034 24.1 3.9 31 113-143 31-61 (211)
118 1tmy_A CHEY protein, TMY; chem 20.3 1.9E+02 0.0063 18.7 5.1 32 113-144 47-85 (120)
119 2qzj_A Two-component response 20.2 1.7E+02 0.006 19.7 5.0 32 113-144 48-85 (136)
120 2a9o_A Response regulator; ess 20.2 1.8E+02 0.0063 18.7 5.1 32 113-144 45-82 (120)
121 4hb9_A Similarities with proba 20.1 57 0.0019 27.2 2.7 18 26-43 14-31 (412)
122 3bfv_A CAPA1, CAPB2, membrane 20.1 1.4E+02 0.0047 23.9 4.9 41 7-47 80-122 (271)
123 1uxo_A YDEN protein; hydrolase 20.1 1.2E+02 0.0042 21.7 4.3 38 7-44 3-41 (192)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.9e-43 Score=316.67 Aligned_cols=229 Identities=17% Similarity=0.284 Sum_probs=180.9
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCC--CcEEEEcCCCCcccccccccC-CCCceEEEecCCCCCCCCCCCCcccc
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKD--LDITILVTPKNLPILSPLLDA-HPAIKTLVLPFPSHPSIPPGIENVRE 83 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G--~~VT~~~t~~~~~~~~~~~~~-~~~i~~~~lp~~~~~~lp~~~~~~~~ 83 (249)
+++||+++|+|+|||+|||++|||+|++|| ++|||++|+.+..++.+.... .++|+|+.+| +++|++.+...+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCccccCC
Confidence 578999999999999999999999999999 999999998766655432211 2579999998 678876554332
Q ss_pred CCCCCcHHHHHHH-HhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecchHHHHHHHHhhhcc-CCC-
Q 041611 84 LGNRGNYPIMTAL-GKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLASVADYCWHH-IGD- 160 (249)
Q Consensus 84 ~~~~~~~~~~~~~-~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~~-~~~- 160 (249)
+...+..+.+.. ..+++.+++++++...+++|||+|+|++|+.++|+++|||++.|||+++++++++++++.+ +..
T Consensus 88 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 -PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 112233444444 3566777777665334899999999999999999999999999999999999999998865 221
Q ss_pred ---CCCCcccc-CCCCCCCccccccCCChhhcccCCCCchhhHHHHHHHhhhcCcEEeecchhhhhHHHHHHHHHHhCCC
Q 041611 161 ---VKSLDVVE-FPDLPRYPVFKRRHLPSMVRSYKESDPESQFVKDGNLANTSSWGCVFNSFDALEGEYSDYLKRKMGHD 236 (249)
Q Consensus 161 ---~~~~~~~~-~pg~p~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vl~NTf~eLE~~~~~~l~~~~~~~ 236 (249)
..+++.+. +||+|+ ++.+|||+++.. +..+.+++++.+..++..++++|++|||+|||++++++++... +
T Consensus 167 ~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~--~ 240 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF--K 240 (454)
T ss_dssp HHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS--S
T ss_pred CCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC--C
Confidence 11223343 899986 999999998874 4345678888888999999999999999999999999999765 5
Q ss_pred CeEEeCcCCC
Q 041611 237 RVFGVGPLSL 246 (249)
Q Consensus 237 ~v~~VGPl~~ 246 (249)
++|+|||+++
T Consensus 241 ~v~~vGPl~~ 250 (454)
T 3hbf_A 241 LLLNVGPFNL 250 (454)
T ss_dssp CEEECCCHHH
T ss_pred CEEEECCccc
Confidence 8999999864
No 2
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.1e-33 Score=256.44 Aligned_cols=225 Identities=20% Similarity=0.248 Sum_probs=168.2
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhC--CCcEEEEcCCCCccc-ccccc----cCCCCceEEEecCCCCCCCCCCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLK--DLDITILVTPKNLPI-LSPLL----DAHPAIKTLVLPFPSHPSIPPGIE 79 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~--G~~VT~~~t~~~~~~-~~~~~----~~~~~i~~~~lp~~~~~~lp~~~~ 79 (249)
++.||+++|+|+|||++||++||++|++| ||+|||++|..+.+. +.+.. ...++++|+.+|.. .+|+. +
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---~~~~~-~ 83 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---EPPPQ-E 83 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---CCCCG-G
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---CCCcc-c
Confidence 46899999999999999999999999999 999999999876421 11111 11257999998842 23321 1
Q ss_pred ccccCCCCCcHHHHHHHHhcHHHHHHHHHhC-CCCCcEEEecCCcccHHHHHhHcCCceEEEecchHHHHHHHHhhhccC
Q 041611 80 NVRELGNRGNYPIMTALGKLYDPIIDWFRSQ-ANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLASVADYCWHHI 158 (249)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~-~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~~~ 158 (249)
..... . .. +......+.+.+++++++. ..++||||+|.++.|+.++|+++|||+++||+++++.++++++++.+.
T Consensus 84 ~~~~~--~-~~-~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 84 LLKSP--E-FY-ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGGSH--H-HH-HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred ccCCc--c-HH-HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11110 1 11 4444456677888888772 128999999999999999999999999999999999999999888651
Q ss_pred ---CCCCCCc---cccCCCC-CCCccccccCCChhhcccCCCCchhhHHHHHHHhhhcCcEEeecchhhhhHHHHHHHHH
Q 041611 159 ---GDVKSLD---VVEFPDL-PRYPVFKRRHLPSMVRSYKESDPESQFVKDGNLANTSSWGCVFNSFDALEGEYSDYLKR 231 (249)
Q Consensus 159 ---~~~~~~~---~~~~pg~-p~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vl~NTf~eLE~~~~~~l~~ 231 (249)
.....++ ...+||+ ++ ++.+|+|..+.+. ...++.+.+..+.+++++++++|||+|||+++++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 160 IEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp TTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred ccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 1111111 3457888 64 8999999877643 23666677777788899999999999999999999987
Q ss_pred Hh--CCCCeEEeCcCCC
Q 041611 232 KM--GHDRVFGVGPLSL 246 (249)
Q Consensus 232 ~~--~~~~v~~VGPl~~ 246 (249)
.. + +++++|||+++
T Consensus 234 ~~~p~-~~v~~vGpl~~ 249 (463)
T 2acv_A 234 HDEKI-PPIYAVGPLLD 249 (463)
T ss_dssp HCTTS-CCEEECCCCCC
T ss_pred ccccC-CcEEEeCCCcc
Confidence 54 4 68999999985
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.5e-34 Score=259.14 Aligned_cols=235 Identities=20% Similarity=0.331 Sum_probs=165.2
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccC-----CCCceEEEecCCCCCCCC
Q 041611 1 MSSSNTRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDA-----HPAIKTLVLPFPSHPSIP 75 (249)
Q Consensus 1 m~~~~~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~-----~~~i~~~~lp~~~~~~lp 75 (249)
||..-.+++||+++|+|++||+|||++||++|++|||+|||++++.+..++.+.... .++++|+.+| +++|
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp 76 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLT 76 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCC
Confidence 566545578999999999999999999999999999999999998776555432110 1379999988 4565
Q ss_pred CCCCccccCCCCCcHHHHHHH-HhcHHHHHHHHHhC-----CCCCcEEEecCCcccHHHHHhHcCCceEEEecchHHHHH
Q 041611 76 PGIENVRELGNRGNYPIMTAL-GKLYDPIIDWFRSQ-----ANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLAS 149 (249)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~ll~~~-----~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~ 149 (249)
+...+. +.. ..+..+...+ +.+.+.++++++++ ..++||||+|.++.|+.++|+++|||++.||++++..+.
T Consensus 77 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 154 (482)
T 2pq6_A 77 PMEGDG-DVS-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLL 154 (482)
T ss_dssp -----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHH
T ss_pred Cccccc-Ccc-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHH
Confidence 421000 101 2234454444 56678888888753 138999999999999999999999999999999999888
Q ss_pred HHHhhhcc--CC-C--C-----CC---Cccc-cCCCCCCCccccccCCChhhcccCCCCchhhHHHHHHHhhhcCcEEee
Q 041611 150 VADYCWHH--IG-D--V-----KS---LDVV-EFPDLPRYPVFKRRHLPSMVRSYKESDPESQFVKDGNLANTSSWGCVF 215 (249)
Q Consensus 150 ~~~~~~~~--~~-~--~-----~~---~~~~-~~pg~p~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vl~ 215 (249)
.+++++.. .+ . . .+ +... .+||++. ++.+++|.++...+..+.+.+++.+..+...+++++|+
T Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 231 (482)
T 2pq6_A 155 NVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILL 231 (482)
T ss_dssp HHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEE
T ss_pred HHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEE
Confidence 87766532 11 0 0 01 1122 3678775 78889998775443334455666566667788999999
Q ss_pred cchhhhhHHHHHHHHHHhCCCCeEEeCcCCC
Q 041611 216 NSFDALEGEYSDYLKRKMGHDRVFGVGPLSL 246 (249)
Q Consensus 216 NTf~eLE~~~~~~l~~~~~~~~v~~VGPl~~ 246 (249)
|||++||++++++++... +++++|||++.
T Consensus 232 nt~~~le~~~~~~~~~~~--~~v~~VGPl~~ 260 (482)
T 2pq6_A 232 NTFNELESDVINALSSTI--PSIYPIGPLPS 260 (482)
T ss_dssp SSCGGGGHHHHHHHHTTC--TTEEECCCHHH
T ss_pred cChHHHhHHHHHHHHHhC--CcEEEEcCCcc
Confidence 999999999999999765 58999999864
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3e-33 Score=253.05 Aligned_cols=235 Identities=17% Similarity=0.242 Sum_probs=160.3
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHhhCC--CcEEEEcCCCCccccccccc-C-CCCceEEEecCCCCCCCCC
Q 041611 1 MSSSNTRTTHILIFPYPAQGHMLPLLDLTHQLSLKD--LDITILVTPKNLPILSPLLD-A-HPAIKTLVLPFPSHPSIPP 76 (249)
Q Consensus 1 m~~~~~~~~hvvl~p~p~~GHi~P~l~La~~La~~G--~~VT~~~t~~~~~~~~~~~~-~-~~~i~~~~lp~~~~~~lp~ 76 (249)
|+.. .++.||+++|+|++||++||++||++|++|| +.||+++++.+.+++.+... . .++++++.++ +++|+
T Consensus 1 m~~~-~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~ 75 (456)
T 2c1x_A 1 MSQT-TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPE 75 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCT
T ss_pred CCCC-CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCC
Confidence 5553 4578999999999999999999999999986 55688988754443322111 0 1479999886 46665
Q ss_pred CCCccccCCCCCcHHHHHHH-HhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecchHHHHHHHHhhh
Q 041611 77 GIENVRELGNRGNYPIMTAL-GKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLASVADYCW 155 (249)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~ 155 (249)
+.+... .+...+..+.... ..+++.+++++++...++||||+|.++.|+.++|+++|||++.||+++++.++.+++.+
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 76 GYVFAG-RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TCCCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred cccccC-ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 532211 1111122333333 33455566555442238999999999999999999999999999999999888877665
Q ss_pred cc-C--CC----CCCCccc-cCCCCCCCccccccCCChhhcccCCCCchhhHHHHHHHhhhcCcEEeecchhhhhHHHHH
Q 041611 156 HH-I--GD----VKSLDVV-EFPDLPRYPVFKRRHLPSMVRSYKESDPESQFVKDGNLANTSSWGCVFNSFDALEGEYSD 227 (249)
Q Consensus 156 ~~-~--~~----~~~~~~~-~~pg~p~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vl~NTf~eLE~~~~~ 227 (249)
.+ . +. ....+.+ .+||++. ++.+|+|..+...+..+.+.+++.+..+..++++++++|||++||+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 43 1 11 1111122 4788875 88999998665332223344555556667788999999999999999999
Q ss_pred HHHHHhCCCCeEEeCcCCC
Q 041611 228 YLKRKMGHDRVFGVGPLSL 246 (249)
Q Consensus 228 ~l~~~~~~~~v~~VGPl~~ 246 (249)
++++.+ +++++|||++.
T Consensus 232 ~~~~~~--~~~~~vGpl~~ 248 (456)
T 2c1x_A 232 DLKSKL--KTYLNIGPFNL 248 (456)
T ss_dssp HHHHHS--SCEEECCCHHH
T ss_pred HHHhcC--CCEEEecCccc
Confidence 999876 58999999863
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.2e-31 Score=243.98 Aligned_cols=229 Identities=17% Similarity=0.222 Sum_probs=164.0
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhC-CCcEEEEcCCCC--cccccccccC-CCCceEEEecCCCCCCCCCCCCcc
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLK-DLDITILVTPKN--LPILSPLLDA-HPAIKTLVLPFPSHPSIPPGIENV 81 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~-G~~VT~~~t~~~--~~~~~~~~~~-~~~i~~~~lp~~~~~~lp~~~~~~ 81 (249)
.++.||+++|+|++||++||++||++|++| ||+|||+++..+ ...+.+.... ..+++|+.+|.. ..++. ..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---~~~~~-~~- 78 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV---DLTDL-SS- 78 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC---CCTTS-CT-
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC---CCCCC-CC-
Confidence 356899999999999999999999999998 999999999874 2222221011 257999988743 12211 10
Q ss_pred ccCCCCCcHHHHHHHHhcHHHHHHHHHhC--CCCC-cEEEecCCcccHHHHHhHcCCceEEEecchHHHHHHHHhhhcc-
Q 041611 82 RELGNRGNYPIMTALGKLYDPIIDWFRSQ--ANPP-VAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLASVADYCWHH- 157 (249)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~l~~ll~~~--~~~~-~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~~- 157 (249)
.. .....+......+.+.+++++++. ..++ ||||+|.++.|+.++|+++|||++.||+++++.+++++|++.+
T Consensus 79 --~~-~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (480)
T 2vch_A 79 --ST-RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLD 155 (480)
T ss_dssp --TC-CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred --ch-hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHH
Confidence 00 112333344455667788887763 1378 9999999999999999999999999999999999999888754
Q ss_pred CCCCC---C-CccccCCCCCCCccccccCCChhhcccCCCCchhhHHHHHHHhhhcCcEEeecchhhhhHHHHHHHHHHh
Q 041611 158 IGDVK---S-LDVVEFPDLPRYPVFKRRHLPSMVRSYKESDPESQFVKDGNLANTSSWGCVFNSFDALEGEYSDYLKRKM 233 (249)
Q Consensus 158 ~~~~~---~-~~~~~~pg~p~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vl~NTf~eLE~~~~~~l~~~~ 233 (249)
+.... + +....+||+|+ ++..++|..+.+. ....++.+.+..+.+++++|+++|||+|||+.+++++++..
T Consensus 156 ~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~ 230 (480)
T 2vch_A 156 ETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230 (480)
T ss_dssp HHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred hcCCCcccccCCcccCCCCCC---CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcc
Confidence 11111 1 12244678775 8888999876543 23355666667777888999999999999999999997521
Q ss_pred C-CCCeEEeCcCCCC
Q 041611 234 G-HDRVFGVGPLSLV 247 (249)
Q Consensus 234 ~-~~~v~~VGPl~~~ 247 (249)
+ .+++++|||++..
T Consensus 231 ~~~~~v~~vGpl~~~ 245 (480)
T 2vch_A 231 LDKPPVYPVGPLVNI 245 (480)
T ss_dssp TTCCCEEECCCCCCC
T ss_pred cCCCcEEEEeccccc
Confidence 0 1589999999753
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.74 E-value=3.5e-18 Score=152.31 Aligned_cols=128 Identities=14% Similarity=0.164 Sum_probs=92.9
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGN 86 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~ 86 (249)
.+.||++++++++||++|+++||++|+++||+|||++++.+.+.+.+ .+++++.++. +++.+.......+.
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~----~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-----AGATPVVYDS----ILPKESNPEESWPE 81 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCEEEECCC----CSCCTTCTTCCCCS
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEecCc----cccccccchhhcch
Confidence 35799999999999999999999999999999999999877555443 3688887763 33332111010111
Q ss_pred C---CcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecchH
Q 041611 87 R---GNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGW 145 (249)
Q Consensus 87 ~---~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a 145 (249)
+ .+..+......+.+.+++++++. ++||||+|.++.|+..+|+++|||++.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 82 DQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 1 11122222234455666777666 899999999989999999999999999998765
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.64 E-value=8.8e-17 Score=141.63 Aligned_cols=137 Identities=12% Similarity=0.091 Sum_probs=85.7
Q ss_pred CCCCC--CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCC---CCC
Q 041611 1 MSSSN--TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHP---SIP 75 (249)
Q Consensus 1 m~~~~--~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~---~lp 75 (249)
|+|++ .+.++|+++|+|++||++|++.||++|++|||+|||++++....... .++.++.+...... ..+
T Consensus 13 ~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~ 86 (400)
T 4amg_A 13 LGTENLYFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE------AGLCAVDVSPGVNYAKLFVP 86 (400)
T ss_dssp --------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT------TTCEEEESSTTCCSHHHHSC
T ss_pred CCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh------cCCeeEecCCchhHhhhccc
Confidence 55654 35689999999999999999999999999999999999886654332 25666655321000 001
Q ss_pred CCCCccccCCC--CCcHHHHH----HHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecchH
Q 041611 76 PGIENVRELGN--RGNYPIMT----ALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGW 145 (249)
Q Consensus 76 ~~~~~~~~~~~--~~~~~~~~----~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a 145 (249)
........... .....+.. ........+.+++++. ++|+||+|.+..|+..+|+++|||++.+++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 87 DDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 11000000000 01111111 1123344556666776 899999999999999999999999999876543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.54 E-value=1.8e-14 Score=128.06 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=84.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGNRG 88 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~~~ 88 (249)
+||++++++++||++|++.||++|+++||+|||+++....+.+.. .+++++.++.. ..+..+.... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~----~~~~~~~~~~---~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-----VGVPHVPVGPS----ARAPIQRAKP---LT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEECCC-----------CCSC---CC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCC----HHHHhhcccc---cc
Confidence 489999999999999999999999999999999999875544443 47889888742 1111111000 11
Q ss_pred cHHHHHHHH-hcHHHHHHHHHhCCCCCcEEEecC-Cccc--HHHHHhHcCCceEEEecch
Q 041611 89 NYPIMTALG-KLYDPIIDWFRSQANPPVAILSDF-FLGW--TLKLAHQLNIVRIAFFSSG 144 (249)
Q Consensus 89 ~~~~~~~~~-~l~~~l~~ll~~~~~~~~~vI~D~-~~~~--~~~vA~~lgiP~v~~~~~~ 144 (249)
...+..... .....++++.+.. .++||||+|. +..| +..+|+++|||++.+++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 69 AEDVRRFTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 111111122 2234455555421 3899999998 7788 8899999999999999876
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.50 E-value=3.9e-14 Score=126.12 Aligned_cols=132 Identities=17% Similarity=0.240 Sum_probs=88.4
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCc
Q 041611 1 MSSSNTRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIEN 80 (249)
Q Consensus 1 m~~~~~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~ 80 (249)
|.+. +.+.||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++. .++.+...
T Consensus 1 M~~~-m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~----~~~~~~~~ 70 (430)
T 2iyf_A 1 MTTQ-TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-----TGPRPVLYHS----TLPGPDAD 70 (430)
T ss_dssp --------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TSCEEEECCC----CSCCTTSC
T ss_pred CCCc-cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEEcCC----cCcccccc
Confidence 4443 445799999999999999999999999999999999998766444333 4688887763 22222111
Q ss_pred cccCCCCC---cHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecch
Q 041611 81 VRELGNRG---NYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSG 144 (249)
Q Consensus 81 ~~~~~~~~---~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~ 144 (249)
........ +..+......+...+.+++++. ++|+||+|.+..|+..+|+++|||++.+++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 71 PEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp GGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 11001011 1111222233445677777776 89999999987788999999999999998654
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.47 E-value=8.5e-14 Score=122.30 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=86.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCCC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGNR 87 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~~ 87 (249)
+.||+++++++.||++|++.||++|+++||+||++++....+.+.. .+++++.++.. ++............
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~----~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-----AGAEVVLYKSE----FDTFHVPEVVKQED 74 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-----TTCEEEECCCG----GGTSSSSSSSCCTT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-----cCCEEEecccc----cccccccccccccc
Confidence 4699999999999999999999999999999999998765554443 36888877632 11110000000001
Q ss_pred CcH---H-HHHHHHhcHHHHHHHHHhCCCCCcEEEec-CCcccHHHHHhHcCCceEEEec
Q 041611 88 GNY---P-IMTALGKLYDPIIDWFRSQANPPVAILSD-FFLGWTLKLAHQLNIVRIAFFS 142 (249)
Q Consensus 88 ~~~---~-~~~~~~~l~~~l~~ll~~~~~~~~~vI~D-~~~~~~~~vA~~lgiP~v~~~~ 142 (249)
... . +......+...+.+++++. ++|+||+| .+..|+..+|+++|||++.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~ 132 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTG 132 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence 111 1 2222223345666777776 89999999 7788888999999999999874
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.43 E-value=2.2e-13 Score=120.62 Aligned_cols=126 Identities=12% Similarity=0.076 Sum_probs=89.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGN 86 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~ 86 (249)
.+.||+++++++.||++|++.||++|.++||+|+++++....+.+.. .+++++.++.. ++...........
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~----~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE----IIDADAAEVFGSD 89 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCS----TTTCCHHHHHHSS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----cCCEEEecccc----ccccccchhhccc
Confidence 46799999999999999999999999999999999998766555543 46888887632 2211100000000
Q ss_pred CCcHH----HHHHHHhcHHHHHHHHHhCCCCCcEEEec-CCcccHHHHHhHcCCceEEEecc
Q 041611 87 RGNYP----IMTALGKLYDPIIDWFRSQANPPVAILSD-FFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 87 ~~~~~----~~~~~~~l~~~l~~ll~~~~~~~~~vI~D-~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
..... +......+...+.+++++. ++|+||+| .+..|+..+|+++|||++.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~ 149 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAA 149 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEec
Confidence 11122 2222233445667777776 89999999 77788889999999999998743
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.38 E-value=6.4e-13 Score=118.01 Aligned_cols=124 Identities=10% Similarity=-0.018 Sum_probs=81.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGNRG 88 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~~~ 88 (249)
+||++++.+++||++|++.||++|+++||+|||+++....+.+.. .+++++.++.. ..+..... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~----~~~~~~~~--~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-----VGVPHVPVGLP----QHMMLQEG--MPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCCEEECSCC----GGGCCCTT--SCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCeeeecCCC----HHHHHhhc--cccch
Confidence 489999999999999999999999999999999999765544443 36888887742 11100000 00011
Q ss_pred cHHHHHHHHh-cHHHHHHHHHhCCCCCcEEEecCC-ccc--HHHHHhHcCCceEEEecch
Q 041611 89 NYPIMTALGK-LYDPIIDWFRSQANPPVAILSDFF-LGW--TLKLAHQLNIVRIAFFSSG 144 (249)
Q Consensus 89 ~~~~~~~~~~-l~~~l~~ll~~~~~~~~~vI~D~~-~~~--~~~vA~~lgiP~v~~~~~~ 144 (249)
...+...... ....++++.+. ..++||||+|.+ ..| +..+|+++|||++.+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 1111111111 12333333321 138999999974 456 7889999999999988775
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.23 E-value=1.1e-11 Score=108.46 Aligned_cols=124 Identities=11% Similarity=0.078 Sum_probs=82.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCC-C-------CCCCCCCc
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSH-P-------SIPPGIEN 80 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~-~-------~lp~~~~~ 80 (249)
+||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++.... . +.|....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIP- 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCC-
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccC-
Confidence 479999999999999999999999999999999998754433332 3677877653100 0 0110000
Q ss_pred cccCCC-CCcHHH-H----HHHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecch
Q 041611 81 VRELGN-RGNYPI-M----TALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSSG 144 (249)
Q Consensus 81 ~~~~~~-~~~~~~-~----~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~ 144 (249)
+. .....+ . .........+.+++++. ++|+||+|.+..|+..+|+++|||++.++..+
T Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 75 ----SDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ----cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 00 001111 1 11122334555566666 89999999988888899999999999987543
No 14
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.20 E-value=5.4e-11 Score=104.78 Aligned_cols=127 Identities=16% Similarity=0.130 Sum_probs=87.4
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCC-------
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIE------- 79 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~------- 79 (249)
..++|+++..++.||++|++.|+++|.++||+|+++++ ...+.+.. .+++++.++... .+.....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~--~~~~~~~~~~~~~~ 90 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDY--SAVKVFEQVAKDNP 90 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-----TTCEEEESSTTC--CHHHHHHHHHHHCH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-----CCCeeEecCCcc--CHHHHhhhcccCCc
Confidence 35799999999999999999999999999999999998 55444443 478888776320 0000000
Q ss_pred --------ccccCCCCCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecc
Q 041611 80 --------NVRELGNRGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 80 --------~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
............+......+...+.+++++. ++|+||+|....++..+|+++|||++.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 91 RFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0000000111222233345567778888887 8999999987777888999999999987654
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.19 E-value=8.2e-12 Score=111.72 Aligned_cols=131 Identities=8% Similarity=0.097 Sum_probs=84.6
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCC-CCCCCCCC-cc---
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSH-PSIPPGIE-NV--- 81 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~-~~lp~~~~-~~--- 81 (249)
...||++++.++.||++|++.||++|.++||+||++++....+.+.. .+++++.++.... .++..... ..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhcccccc
Confidence 35799999999999999999999999999999999998765444433 4788888774200 00000000 00
Q ss_pred ---ccC----CCC-CcHHH---HHHH----H-----h-cHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEE
Q 041611 82 ---REL----GNR-GNYPI---MTAL----G-----K-LYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAF 140 (249)
Q Consensus 82 ---~~~----~~~-~~~~~---~~~~----~-----~-l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~ 140 (249)
.+. +.. .+..+ .... . . ....+.+++++. ++|+||+|.+..|+..+|+++|||++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEEEE
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEEEE
Confidence 000 000 11111 1111 1 1 223344445555 8999999998888889999999999998
Q ss_pred ecch
Q 041611 141 FSSG 144 (249)
Q Consensus 141 ~~~~ 144 (249)
...+
T Consensus 172 ~~~~ 175 (441)
T 2yjn_A 172 LWGP 175 (441)
T ss_dssp CSSC
T ss_pred ecCC
Confidence 7654
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.15 E-value=8e-11 Score=104.25 Aligned_cols=124 Identities=13% Similarity=0.052 Sum_probs=80.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGNRG 88 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~~~ 88 (249)
+||++++.++.||++|++.||++|.++||+|+|+++....+.+.. .+++++.++... +.. .+.. ... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~-~~~-~~~~-~~~-~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-----VGVPMVPVGRAV-RAG-AREP-GEL-PPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-----TTCCEEECSSCS-SGG-GSCT-TCC-CTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCceeecCCCH-HHH-hccc-cCC-HHHH
Confidence 479999999999999999999999999999999998765544443 468888776321 000 0000 000 0011
Q ss_pred cHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccH---HHHHhHcCCceEEEecchH
Q 041611 89 NYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWT---LKLAHQLNIVRIAFFSSGW 145 (249)
Q Consensus 89 ~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~---~~vA~~lgiP~v~~~~~~a 145 (249)
...+..........+.++++ ++|+||+|....++ ..+|+++|||++..+.++.
T Consensus 72 ~~~~~~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 22233222333333333332 69999999765554 6889999999998777654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.11 E-value=5.1e-11 Score=104.88 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCC-CCCCCC--CCccc
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSH-PSIPPG--IENVR 82 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~-~~lp~~--~~~~~ 82 (249)
..++||++++.++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.++.... ..+... .....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCccc
Confidence 346799999999999999999999999999999999998655444433 3677777762100 000000 00000
Q ss_pred cCCCCC---cHH----HHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecc
Q 041611 83 ELGNRG---NYP----IMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 83 ~~~~~~---~~~----~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
..+... ... +......+...+.+++++. ++|+||+|....++..+|+++|||++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 000000 111 1111223345666777777 8999999987777888899999999987754
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.07 E-value=1.9e-10 Score=100.86 Aligned_cols=128 Identities=11% Similarity=0.098 Sum_probs=81.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEe-cCCC-CC-----CCCCCCCcc
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVL-PFPS-HP-----SIPPGIENV 81 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l-p~~~-~~-----~lp~~~~~~ 81 (249)
+||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.+ +... .+ ..+......
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhccccccccc
Confidence 689999999999999999999999999999999997654433333 36777766 3210 00 000000000
Q ss_pred ccCCCCCcH-HHHHHHHhc-------HHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecc
Q 041611 82 RELGNRGNY-PIMTALGKL-------YDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~l-------~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
......... .+......+ ...+.+++++. +||+||+|.+..++..+|+++|||++.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 000000011 111111233 55667777777 8999999986666778899999999998544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.97 E-value=9e-10 Score=96.96 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=84.0
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCC-------------CCC
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFP-------------SHP 72 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~-------------~~~ 72 (249)
..+++|+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.++.. ...
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhccc
Confidence 457899999999999999999999999999999999998754333332 46888877630 000
Q ss_pred CCCCCCCccccCCCCCcHHH-HHH-HHhcHHHHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEecc
Q 041611 73 SIPPGIENVRELGNRGNYPI-MTA-LGKLYDPIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 73 ~lp~~~~~~~~~~~~~~~~~-~~~-~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
+.+. ....... .....+ ... ...+...+.+++++. +||+||+|....++..+|+++|||++.....
T Consensus 93 ~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 93 SPEG-LTPEQLS--ELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp CCTT-CCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred CCcc-CChhHhh--HHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 0110 0000000 011111 111 122335666777777 8999999977666778899999999987544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.45 E-value=8.8e-07 Score=77.26 Aligned_cols=115 Identities=13% Similarity=0.167 Sum_probs=68.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcc--cccccccCCCCceEEEecCCCCCCCCCCCCccccCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLP--ILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGN 86 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~--~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~ 86 (249)
.+|++.....-||++|.+.||++|.++||+|+|+++..-.+ .+.+ .+++++.++.. +++.. .....+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~---~~~~~-~~~~~~-- 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS---GLRGK-GLKSLV-- 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-----GTCCEEECC-------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-----cCCcEEEEECC---CcCCC-CHHHHH--
Confidence 46776655444999999999999999999999999764322 1222 36777777642 33210 000000
Q ss_pred CCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcccH--HHHHhHcCCceEEE
Q 041611 87 RGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGWT--LKLAHQLNIVRIAF 140 (249)
Q Consensus 87 ~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~~--~~vA~~lgiP~v~~ 140 (249)
.....+..+. ....+++++. +||+||++...... .-.|+.+|||.++.
T Consensus 72 ~~~~~~~~~~----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 72 KAPLELLKSL----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp -CHHHHHHHH----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHH----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 0111222222 1234566666 89999999754332 35578899999975
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.65 E-value=0.00036 Score=59.69 Aligned_cols=117 Identities=12% Similarity=0.102 Sum_probs=72.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcc--cccccccCCCCceEEEecCCCCCCCCCCCCccccCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLP--ILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGN 86 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~--~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~ 86 (249)
.+|+++....-||..+++.|++.|+++||+|++++...... .+.. .++++..++.. +++.. .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~---~~~~~-~~~~~--- 74 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS---GLRGK-GIKAL--- 74 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC---CCTTC-CHHHH---
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-----cCCceEEecCC---ccCcC-ccHHH---
Confidence 68998887666999999999999999999999998765321 1221 36777766532 22110 00000
Q ss_pred CCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCc-c-cHHHHHhHcCCceEEEec
Q 041611 87 RGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFL-G-WTLKLAHQLNIVRIAFFS 142 (249)
Q Consensus 87 ~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~-~-~~~~vA~~lgiP~v~~~~ 142 (249)
+....... .....+.+++++. ++|+|+++... . ++..+|+..|+|+++...
T Consensus 75 --~~~~~~~~-~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 75 --IAAPLRIF-NAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp --HTCHHHHH-HHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred --HHHHHHHH-HHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 00001111 1123455566666 89999998643 2 345667889999987543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=95.81 E-value=0.12 Score=44.66 Aligned_cols=39 Identities=13% Similarity=0.339 Sum_probs=29.8
Q ss_pred CceEEEEcC---C-C-CCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 8 TTHILIFPY---P-A-QGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 8 ~~hvvl~p~---p-~-~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
+++|+++.. | . -|--.-+.+|++.|+++||+|+++++..
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 568887762 2 2 3444568999999999999999999654
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.63 E-value=0.071 Score=46.41 Aligned_cols=120 Identities=12% Similarity=0.187 Sum_probs=66.3
Q ss_pred CCceEEEEcC---C--------CCCChHHHHHHHHHHhhCCCcEEEEcCCCCccc--ccccccCCCCceEEEecCCCCCC
Q 041611 7 RTTHILIFPY---P--------AQGHMLPLLDLTHQLSLKDLDITILVTPKNLPI--LSPLLDAHPAIKTLVLPFPSHPS 73 (249)
Q Consensus 7 ~~~hvvl~p~---p--------~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~--~~~~~~~~~~i~~~~lp~~~~~~ 73 (249)
.+++|+++.. | .-|+-..+..|++.|+++||+|++++....... .... ..+++++.++...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~v~v~~~~~~~--- 92 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRV---AENLRVINIAAGP--- 92 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEE---ETTEEEEEECCSC---
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccc---cCCeEEEEecCCC---
Confidence 4568998874 3 248889999999999999999999986543211 1110 1467777776321
Q ss_pred CCCCCCccccCCCCCcHHHHHHHHhcHHHHHHH-HHhCCCCCcEEEecCCcc-cH-HHHHhHcCCceEEEecc
Q 041611 74 IPPGIENVRELGNRGNYPIMTALGKLYDPIIDW-FRSQANPPVAILSDFFLG-WT-LKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 74 lp~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-l~~~~~~~~~vI~D~~~~-~~-~~vA~~lgiP~v~~~~~ 143 (249)
. .... ... ....+. .+...+.++ ++... ++|+|++..... +. ..+++.+|+|.|...-.
T Consensus 93 ~-~~~~-~~~----~~~~~~----~~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 93 Y-EGLS-KEE----LPTQLA----AFTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp S-SSCC-GGG----GGGGHH----HHHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred c-cccc-hhH----HHHHHH----HHHHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 0 0000 000 111111 111122222 44331 499998765332 22 34677789999875543
No 24
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=95.37 E-value=0.078 Score=47.25 Aligned_cols=122 Identities=11% Similarity=0.123 Sum_probs=67.1
Q ss_pred CceEEEEcC---C------------CCCChHHHHHHHHHHhhCCCcEEEEcCCCCccc-------ccccccCCCCceEEE
Q 041611 8 TTHILIFPY---P------------AQGHMLPLLDLTHQLSLKDLDITILVTPKNLPI-------LSPLLDAHPAIKTLV 65 (249)
Q Consensus 8 ~~hvvl~p~---p------------~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~-------~~~~~~~~~~i~~~~ 65 (249)
+++|+++.. | .-|.-.-+.+|++.|+++||+|++++....... .... ....+++++.
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~-~~~~gv~v~~ 85 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY-QETNKVRIVR 85 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC-TTCSSEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc-cCCCCeEEEE
Confidence 478998864 2 246678899999999999999999986543211 1110 0014688877
Q ss_pred ecCCCCCCCCCCCCccccCCCCCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCc-ccH-HHHHhHcCCceEEEecc
Q 041611 66 LPFPSHPSIPPGIENVRELGNRGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFL-GWT-LKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 66 lp~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~-~~~-~~vA~~lgiP~v~~~~~ 143 (249)
++.. +....... .....+. .....+.+++++...++|+|.+.... .+. ..+++.+|+|.|...-.
T Consensus 86 ~~~~-----~~~~~~~~----~~~~~~~----~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 86 IPFG-----GDKFLPKE----ELWPYLH----EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp ECCS-----CSSCCCGG----GCGGGHH----HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred ecCC-----CcCCcCHH----HHHHHHH----HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 7642 11000000 1111111 11123445555421179998875432 222 34677889998865443
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.38 E-value=1.1 Score=38.26 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=62.2
Q ss_pred CceEEEEcCCCC-CChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCC
Q 041611 8 TTHILIFPYPAQ-GHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGN 86 (249)
Q Consensus 8 ~~hvvl~p~p~~-GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~ 86 (249)
++.+....+|.. |.-.-...|++.|+++||+|++++...... ... ...++++..++.. ..+. ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~---~~~~i~~~~~~~~---~~~~----~~---- 79 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK---VYPNIYFHEVTVN---QYSV----FQ---- 79 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C---CCTTEEEECCCCC-----------CC----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc---cCCceEEEecccc---cccc----cc----
Confidence 345777777765 566778899999999999999998754321 111 1146666655421 1110 00
Q ss_pred CCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCcc--cHHHHHhHc---CCceEEEecc
Q 041611 87 RGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLG--WTLKLAHQL---NIVRIAFFSS 143 (249)
Q Consensus 87 ~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~--~~~~vA~~l---giP~v~~~~~ 143 (249)
.....+ .....+.+++++. ++|+|++..... ++..+++++ ++|.+...-.
T Consensus 80 ~~~~~~-----~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 80 YPPYDL-----ALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp SCCHHH-----HHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred cccccH-----HHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 001111 1122344555555 899998864432 233455544 5998875443
No 26
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=92.55 E-value=0.29 Score=41.83 Aligned_cols=115 Identities=13% Similarity=0.076 Sum_probs=61.0
Q ss_pred CCceEEEEcC---CC-CCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccc
Q 041611 7 RTTHILIFPY---PA-QGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVR 82 (249)
Q Consensus 7 ~~~hvvl~p~---p~-~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~ 82 (249)
++++|+++.. +. -|+-.-+..|++.|+++||+|++++............. ..+ ++..++.. .. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~------~~---~~ 87 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-SGG-KAVPIPYN------GS---VA 87 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-ECC-CCC------------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-cCC-cEEecccc------CC---cc
Confidence 4668887752 22 45668899999999999999999997654321111000 001 12212110 00 00
Q ss_pred cCCCCCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCccc--HHHHHhHcCCceEEEecc
Q 041611 83 ELGNRGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFLGW--TLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~~~--~~~vA~~lgiP~v~~~~~ 143 (249)
.. ... ......+.+++++. ++|+|++.....+ +..+++..|+|.+...-.
T Consensus 88 ~~--~~~-------~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 139 (406)
T 2gek_A 88 RL--RFG-------PATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHT 139 (406)
T ss_dssp -----CC-------HHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECC
T ss_pred cc--ccc-------HHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcC
Confidence 00 000 01123455566665 8999987654432 345667789999886543
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.14 E-value=0.68 Score=39.16 Aligned_cols=108 Identities=12% Similarity=0.094 Sum_probs=64.7
Q ss_pred CCceEEEEcC--C--CCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccc
Q 041611 7 RTTHILIFPY--P--AQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVR 82 (249)
Q Consensus 7 ~~~hvvl~p~--p--~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~ 82 (249)
.+++|+++.. + .-|+-.-+..|++.| +||+|++++........... ....++++..++.. ..++
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~------- 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-DKTLDYEVIRWPRS--VMLP------- 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-HTTCSSEEEEESSS--SCCS-------
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-ccccceEEEEcccc--cccc-------
Confidence 3567887753 3 357778899999999 69999999976553210110 01135677666521 0000
Q ss_pred cCCCCCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecCCc--ccHHHHHhHcCCceEEEe
Q 041611 83 ELGNRGNYPIMTALGKLYDPIIDWFRSQANPPVAILSDFFL--GWTLKLAHQLNIVRIAFF 141 (249)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~~~--~~~~~vA~~lgiP~v~~~ 141 (249)
.. .....+.+++++. ++|+|++.... .+....++++|+|.+++.
T Consensus 71 -----~~--------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (394)
T 3okp_A 71 -----TP--------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIAS 116 (394)
T ss_dssp -----CH--------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEE
T ss_pred -----ch--------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEE
Confidence 01 1123455666666 89999875443 345677899999955543
No 28
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=89.59 E-value=1.5 Score=35.71 Aligned_cols=96 Identities=18% Similarity=0.115 Sum_probs=50.8
Q ss_pred HHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCC---CCCCCCCCCccccCCCCCcHHHHHHHHhcHH
Q 041611 25 LLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPS---HPSIPPGIENVRELGNRGNYPIMTALGKLYD 101 (249)
Q Consensus 25 ~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~---~~~lp~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (249)
+..|++.|.+.| +|+++.+..+.+-......-...+++..+.... .+|.|. ... .-
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~~~v~GTPa-------------DCV-------~l 75 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFYTVIDGTPA-------------DCV-------HL 75 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEEEETTCCHH-------------HHH-------HH
T ss_pred HHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccceeecCCChH-------------HHH-------hh
Confidence 567889999888 699988776654333221111224444332100 011110 011 11
Q ss_pred HHHHHHHhCCCCCcEEEe----------cCCcccHH---HHHhHcCCceEEEecc
Q 041611 102 PIIDWFRSQANPPVAILS----------DFFLGWTL---KLAHQLNIVRIAFFSS 143 (249)
Q Consensus 102 ~l~~ll~~~~~~~~~vI~----------D~~~~~~~---~vA~~lgiP~v~~~~~ 143 (249)
.+..++.+. +||+||+ |.+++.+. .-|.-+|||.++++-.
T Consensus 76 al~~~l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 76 GYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhhhcCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 222333333 7999998 44544443 3356799999999853
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=89.58 E-value=1.1 Score=37.96 Aligned_cols=113 Identities=12% Similarity=-0.026 Sum_probs=57.9
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhC-CCcEEEEcCCCCcccccccccCCCCceE-EEecCCCCCCCCCCCCccccCC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLK-DLDITILVTPKNLPILSPLLDAHPAIKT-LVLPFPSHPSIPPGIENVRELG 85 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~-G~~VT~~~t~~~~~~~~~~~~~~~~i~~-~~lp~~~~~~lp~~~~~~~~~~ 85 (249)
..+|+++..- .+.......|++.|.++ ||+|.++.+............ .-++.+ ..++. .. .. .
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~--~~-~--- 70 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-LFGIQEDRNLDV------MQ--ER-Q--- 70 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-TTTCCCSEECCC------CS--SC-C---
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-HcCCCccccccc------CC--CC-c---
Confidence 3678877632 22334467789999988 799887766432211111000 012222 12221 10 00 0
Q ss_pred CCCcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEe--cCCcccH-HHHHhHcCCceEEEe
Q 041611 86 NRGNYPIMTALGKLYDPIIDWFRSQANPPVAILS--DFFLGWT-LKLAHQLNIVRIAFF 141 (249)
Q Consensus 86 ~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~~~ 141 (249)
.....+ ......+.+++++. +||+|++ +....|. ..+|+.+|+|.+...
T Consensus 71 -~~~~~~----~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 71 -ALPDLA----ARILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp -CHHHHH----HHHHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred -cHHHHH----HHHHHHHHHHHHHc--CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 001111 11223456667776 8999988 3334454 456788999987654
No 30
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=88.11 E-value=2 Score=36.00 Aligned_cols=51 Identities=8% Similarity=0.185 Sum_probs=35.1
Q ss_pred eEEEEc---CCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEec
Q 041611 10 HILIFP---YPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLP 67 (249)
Q Consensus 10 hvvl~p---~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp 67 (249)
+|+++. .|.-|.-.-+.+|++.|+++||+|++++...... . ..+++++.++
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~------~~~~~v~~~~ 55 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-C------PKAFELIQVP 55 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-C------CTTCEEEECC
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-C------CCCcEEEEEc
Confidence 456553 2445777889999999999999999998753211 1 1356776655
No 31
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=87.82 E-value=1.4 Score=42.09 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=53.7
Q ss_pred HHHHHHhhCCCcEE----EEcCCCCcc-------cccccccCCCCceEEEecCCCCCC-CCCCCCccccCCCCCcHHHHH
Q 041611 27 DLTHQLSLKDLDIT----ILVTPKNLP-------ILSPLLDAHPAIKTLVLPFPSHPS-IPPGIENVRELGNRGNYPIMT 94 (249)
Q Consensus 27 ~La~~La~~G~~VT----~~~t~~~~~-------~~~~~~~~~~~i~~~~lp~~~~~~-lp~~~~~~~~~~~~~~~~~~~ 94 (249)
+||++|+++||+|| ++|-..... .... .....+++++.+|+...++ +...... . ..+..+ .
T Consensus 318 ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~-i~~~~gv~I~RvP~~~~~g~l~~~l~k-~----~L~~~L-~ 390 (816)
T 3s28_A 318 EMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER-VYDSEYCDILRVPFRTEKGIVRKWISR-F----EVWPYL-E 390 (816)
T ss_dssp HHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE-CTTCSSEEEEEECEEETTEEECSCCCT-T----TCGGGH-H
T ss_pred HHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee-ecCcCCeEEEEecCCCccccccccccH-H----HHHHHH-H
Confidence 58888889999998 776443221 1111 1112478888887531111 0100100 0 111111 1
Q ss_pred HHHhcHHHHHHHHHhCCCCCcEEEecCCc-cc-HHHHHhHcCCceEEEe
Q 041611 95 ALGKLYDPIIDWFRSQANPPVAILSDFFL-GW-TLKLAHQLNIVRIAFF 141 (249)
Q Consensus 95 ~~~~l~~~l~~ll~~~~~~~~~vI~D~~~-~~-~~~vA~~lgiP~v~~~ 141 (249)
.+ ....++.+++....++|+|.+.... ++ +..+|+++|+|.|...
T Consensus 391 ~F--~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~ 437 (816)
T 3s28_A 391 TY--TEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIA 437 (816)
T ss_dssp HH--HHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HH--HHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEE
Confidence 11 1133444555443479999875322 23 3467888999988753
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=85.69 E-value=1.6 Score=36.82 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=57.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHhhCCC-cEEEEcCCCCcccccccccCCCCceE-EEecCCCCCCCCCCCCccccCCCC
Q 041611 10 HILIFPYPAQGHMLPLLDLTHQLSLKDL-DITILVTPKNLPILSPLLDAHPAIKT-LVLPFPSHPSIPPGIENVRELGNR 87 (249)
Q Consensus 10 hvvl~p~p~~GHi~P~l~La~~La~~G~-~VT~~~t~~~~~~~~~~~~~~~~i~~-~~lp~~~~~~lp~~~~~~~~~~~~ 87 (249)
+|+++... .++...+..|+++|.++|+ ++.++.+............ ..++.+ ..++. ... . .
T Consensus 2 kIl~v~~~-~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~--~------~ 65 (384)
T 1vgv_A 2 KVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLK-LFSIVPDYDLNI------MQP--G------Q 65 (384)
T ss_dssp EEEEEECS-HHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHH-HHTCCCSEECCC------CST--T------S
T ss_pred eEEEEecc-cHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHH-HcCCCCCcceec------CCC--C------c
Confidence 56666433 4667778899999999994 8877654322111111000 012222 22221 000 0 0
Q ss_pred CcHHHHHHHHhcHHHHHHHHHhCCCCCcEEEecC--CcccH-HHHHhHcCCceEEEec
Q 041611 88 GNYPIMTALGKLYDPIIDWFRSQANPPVAILSDF--FLGWT-LKLAHQLNIVRIAFFS 142 (249)
Q Consensus 88 ~~~~~~~~~~~l~~~l~~ll~~~~~~~~~vI~D~--~~~~~-~~vA~~lgiP~v~~~~ 142 (249)
.... ........+.+++++. ++|+|++-. ...|. ..+|+..|+|.+....
T Consensus 66 ~~~~---~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 66 GLTE---ITCRILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp CHHH---HHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred cHHH---HHHHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 1111 1111223456666666 899998732 34454 3456788999987544
No 33
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=82.03 E-value=6.6 Score=31.89 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=21.0
Q ss_pred HHHHHHHHhhCCCcEEEEcCCCCcccc
Q 041611 25 LLDLTHQLSLKDLDITILVTPKNLPIL 51 (249)
Q Consensus 25 ~l~La~~La~~G~~VT~~~t~~~~~~~ 51 (249)
+..|++.|.+.| +|+++.+..+.+-.
T Consensus 17 i~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 17 INALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred HHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 677899999988 99999987765443
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=79.39 E-value=2.2 Score=35.45 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=24.3
Q ss_pred CCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 19 QGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 19 ~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
-|.-.-..+|++.|+++||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4666788999999999999999998764
No 35
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=79.20 E-value=2.1 Score=38.80 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=29.1
Q ss_pred CCCCC-CCCceEEEEcC---CC--CCCh-HHHHHHHHHHhhCCCcEEEEcCC
Q 041611 1 MSSSN-TRTTHILIFPY---PA--QGHM-LPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 1 m~~~~-~~~~hvvl~p~---p~--~GHi-~P~l~La~~La~~G~~VT~~~t~ 45 (249)
|+..+ ..++||+++.. |. .|=+ .-.-.|+++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 55543 35789999863 32 2322 45668999999999999999854
No 36
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=79.03 E-value=4.2 Score=33.56 Aligned_cols=87 Identities=14% Similarity=0.130 Sum_probs=52.4
Q ss_pred CCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCccccCCCCCcHHHHHHH
Q 041611 17 PAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIENVRELGNRGNYPIMTAL 96 (249)
Q Consensus 17 p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ 96 (249)
=|.||+.=.+.||++|. +|+|++.......++. -++.+..++ . ...
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~-----~g~~v~~l~--------~----------~d~------- 58 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE-----IPYPVYELS--------S----------ESI------- 58 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG-----CCSCEEECS--------S----------SCH-------
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH-----CCCeEEEcC--------c----------cCH-------
Confidence 46799999999999998 7999986543222221 123333222 1 001
Q ss_pred HhcHHHHHHHHHhCCCCCcEEEecCCcc---cHHHHHhHcCCceEEEecc
Q 041611 97 GKLYDPIIDWFRSQANPPVAILSDFFLG---WTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 97 ~~l~~~l~~ll~~~~~~~~~vI~D~~~~---~~~~vA~~lgiP~v~~~~~ 143 (249)
..+.+++++. ++|+||.|.+.. |-..+.+..|++.+.+-=.
T Consensus 59 ----~~~~~~l~~~--~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~ 102 (282)
T 3hbm_A 59 ----YELINLIKEE--KFELLIIDHYGISVDDEKLIKLETGVKILSFDDE 102 (282)
T ss_dssp ----HHHHHHHHHH--TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSS
T ss_pred ----HHHHHHHHhC--CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecC
Confidence 1233444444 799999998764 3334444468888877554
No 37
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.15 E-value=1.6 Score=38.03 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=29.8
Q ss_pred CCCceEEEEc-CCCC----CChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 6 TRTTHILIFP-YPAQ----GHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 6 ~~~~hvvl~p-~p~~----GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
.++++|+++. .-.. |=.+-..+||++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 3567887554 3222 333568899999999999999999753
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=74.30 E-value=5 Score=34.61 Aligned_cols=42 Identities=14% Similarity=0.065 Sum_probs=30.4
Q ss_pred hcHHHHHHHHHhCCCCCcEEEe--cCCcccHHHHHhHcCCceEEEe
Q 041611 98 KLYDPIIDWFRSQANPPVAILS--DFFLGWTLKLAHQLNIVRIAFF 141 (249)
Q Consensus 98 ~l~~~l~~ll~~~~~~~~~vI~--D~~~~~~~~vA~~lgiP~v~~~ 141 (249)
.+...+++++++. +||+||. |....|+...|.++|||.+.+.
T Consensus 81 ~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 81 LVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 3445566777777 8998766 5556677677889999987664
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=72.78 E-value=5.2 Score=34.09 Aligned_cols=41 Identities=12% Similarity=0.063 Sum_probs=31.7
Q ss_pred CCceEEEE-cCC-CCCChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 7 RTTHILIF-PYP-AQGHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 7 ~~~hvvl~-p~p-~~GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
++.+|+++ +.+ .-|+-..+..|++.|+++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 45678755 444 347888999999999999999999886543
No 40
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=69.88 E-value=15 Score=30.36 Aligned_cols=26 Identities=12% Similarity=-0.012 Sum_probs=20.8
Q ss_pred HHHHHHHHhhCCCcEEEEcCCCCcccc
Q 041611 25 LLDLTHQLSLKDLDITILVTPKNLPIL 51 (249)
Q Consensus 25 ~l~La~~La~~G~~VT~~~t~~~~~~~ 51 (249)
+..|++.|.+.| +|+++.+..+.+-.
T Consensus 16 i~aL~~aL~~~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 16 LRLLYQFALSLG-DVDVVAPESPKSAT 41 (280)
T ss_dssp HHHHHHHHGGGS-EEEEEEESSCTTTS
T ss_pred HHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 667899999888 99999987765443
No 41
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=66.63 E-value=6.2 Score=29.56 Aligned_cols=42 Identities=12% Similarity=0.101 Sum_probs=36.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
.++++|++...++-+|-.-..-++..|..+|++|.++...-.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 357899999999999999999999999999999998876443
No 42
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.08 E-value=7.8 Score=28.20 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
+.|++++ |.|++- ..+++.|.++|++|+++...
T Consensus 3 ~~~vlI~---G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC---GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEE---CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEE---CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4678877 347665 78899999999999999864
No 43
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=64.01 E-value=11 Score=30.42 Aligned_cols=40 Identities=10% Similarity=-0.030 Sum_probs=36.1
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
.+.+|++.+.++-+|-....-++..|..+|++|.++...-
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4678999999999999999999999999999999987543
No 44
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=63.95 E-value=9.9 Score=29.55 Aligned_cols=41 Identities=10% Similarity=-0.049 Sum_probs=36.5
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
.+.+|++.+.++-.|-....-++..|..+|++|.++...-.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp 127 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIE 127 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBC
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 35689999999999999999999999999999999886543
No 45
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=63.65 E-value=11 Score=27.17 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=34.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
.+++|++.+.++-+|-.-..-++..|..+|++|..+...
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 357899999999999999999999999999999988764
No 46
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=63.61 E-value=6.2 Score=34.43 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=27.2
Q ss_pred eEEEEcC---C---CCCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 10 HILIFPY---P---AQGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 10 hvvl~p~---p---~~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
+|+++.. | .-|=-.-+.+|++.|+++||+|++++...
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5676653 2 12334667899999999999999998643
No 47
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=60.29 E-value=7.7 Score=33.85 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=26.9
Q ss_pred eEEEEcC---C--CCC-ChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 10 HILIFPY---P--AQG-HMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 10 hvvl~p~---p--~~G-Hi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
+|+++.. | ..| =-.-...|++.|+++||+|++++...
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 5676653 2 233 33567889999999999999998653
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=58.94 E-value=49 Score=27.70 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=44.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhC--CCcEEEEcCCCCcccccccccCCCCce-EEEe
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLK--DLDITILVTPKNLPILSPLLDAHPAIK-TLVL 66 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~--G~~VT~~~t~~~~~~~~~~~~~~~~i~-~~~l 66 (249)
...+|+++-.-+.|.+.-...+.+.|.++ +.+||+++.+.+.+.++. .|.++ ++.+
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~----~p~vd~vi~~ 65 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY----NPNIDELIVV 65 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS----CTTCSEEEEE
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----CCCccEEEEe
Confidence 45689999999999999999999999886 899999998877655443 25664 4444
No 49
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=57.76 E-value=13 Score=29.23 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=35.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCccccc
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILS 52 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~ 52 (249)
++.||++.-..+.|-+. ..+|.++|.++| +|.++.|+...+.+.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 35688888888877776 899999999999 999999986654443
No 50
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=57.30 E-value=13 Score=31.98 Aligned_cols=41 Identities=15% Similarity=-0.015 Sum_probs=28.3
Q ss_pred cHHHHHHHHHhCCCCCcEEEe--cCCcccH-HHHHhHcCCceEEEe
Q 041611 99 LYDPIIDWFRSQANPPVAILS--DFFLGWT-LKLAHQLNIVRIAFF 141 (249)
Q Consensus 99 l~~~l~~ll~~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~~~ 141 (249)
....+++++++. +||+|+. |....|+ ...|++.|||.+.+.
T Consensus 99 ~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 99 ILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp HHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred HHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 344566677777 8998876 4444465 467788999988763
No 51
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=55.95 E-value=16 Score=28.77 Aligned_cols=45 Identities=13% Similarity=-0.042 Sum_probs=37.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCccc
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPI 50 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~ 50 (249)
..+.+|++.+.++-.|-....-++..|..+|++|..+...-..+.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 346799999999999999999999999999999999887544433
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=53.01 E-value=36 Score=27.98 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=34.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHhhC--CCcEEEEcCCCCcccc
Q 041611 10 HILIFPYPAQGHMLPLLDLTHQLSLK--DLDITILVTPKNLPIL 51 (249)
Q Consensus 10 hvvl~p~p~~GHi~P~l~La~~La~~--G~~VT~~~t~~~~~~~ 51 (249)
+|+++-.-+.|-+.=...+.+.|.++ |.+|++++.+...+.+
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~ 45 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL 45 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH
Confidence 68888888889998888899999875 9999999987655443
No 53
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=51.43 E-value=19 Score=27.36 Aligned_cols=43 Identities=9% Similarity=0.173 Sum_probs=33.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCccccc
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILS 52 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~ 52 (249)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+...+.+.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 57777766665555 48899999999999999999986654443
No 54
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=50.95 E-value=26 Score=26.96 Aligned_cols=36 Identities=11% Similarity=-0.117 Sum_probs=27.9
Q ss_pred CCcEEEecCCcccHHHHHhHcCCceEEEecchHHHHHHH
Q 041611 113 PPVAILSDFFLGWTLKLAHQLNIVRIAFFSSGWLLASVA 151 (249)
Q Consensus 113 ~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~ 151 (249)
++++||-|.. +.+.|+++|+|.+...++--+....+
T Consensus 142 G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~Ai 177 (196)
T 2q5c_A 142 NIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRRAI 177 (196)
T ss_dssp TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHHHH
Confidence 7999998754 68999999999999887555444333
No 55
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=50.01 E-value=31 Score=27.42 Aligned_cols=40 Identities=13% Similarity=0.192 Sum_probs=35.4
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
.+..|++.--||.|=..-++++|.+|+++|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4667888889999999999999999999999998887654
No 56
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=49.29 E-value=22 Score=30.58 Aligned_cols=41 Identities=10% Similarity=-0.015 Sum_probs=28.5
Q ss_pred cHHHHHHHHHhCCCCCcEEEe--cCCcccH-HHHHhHcCCceEEEe
Q 041611 99 LYDPIIDWFRSQANPPVAILS--DFFLGWT-LKLAHQLNIVRIAFF 141 (249)
Q Consensus 99 l~~~l~~ll~~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~~~ 141 (249)
....+++++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 102 ~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 102 VMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 344566677777 8998876 3344554 567889999987664
No 57
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=49.26 E-value=13 Score=31.85 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=25.4
Q ss_pred CCceEEEEc---CCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 7 RTTHILIFP---YPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 7 ~~~hvvl~p---~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
++++|+++. +| .+.-.-...+++.|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 357888776 55 332223456788999999 99999543
No 58
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=47.42 E-value=27 Score=27.32 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=34.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCccc
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPI 50 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~ 50 (249)
+.||++.-..+.|-+. ...|.++|.++|++|.++.|+...+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~f 45 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLV 45 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHH
Confidence 4688888788877777 88999999999999999998755433
No 59
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=46.93 E-value=26 Score=27.17 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=34.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcC
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t 44 (249)
.++..|+++.-++.|=..-.+.+|.+.+.+|.+|-|+.-
T Consensus 26 ~~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 26 EERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp -CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 456689999999999999999999999999999999954
No 60
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=46.27 E-value=32 Score=26.70 Aligned_cols=43 Identities=14% Similarity=-0.011 Sum_probs=32.8
Q ss_pred CCceEEEEcCCCCCChH-HHHHHHHHHhhCCCcEEEEcCCCCccc
Q 041611 7 RTTHILIFPYPAQGHML-PLLDLTHQLSLKDLDITILVTPKNLPI 50 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~-P~l~La~~La~~G~~VT~~~t~~~~~~ 50 (249)
+..||++.-..+ +... =...|.++|.++|++|.++.|+...+.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 446777665555 5555 689999999999999999998865443
No 61
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=43.97 E-value=18 Score=26.10 Aligned_cols=34 Identities=15% Similarity=0.114 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
.+++++.-- . =+.|++.+++.|.++|.+|+++ ..
T Consensus 19 ~~~llIaGG-~-GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 19 GKILAIGAY-T-GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp SEEEEEEET-T-HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CeEEEEECc-C-cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 456655432 2 3899999999999999999998 54
No 62
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=42.05 E-value=29 Score=24.09 Aligned_cols=32 Identities=28% Similarity=0.299 Sum_probs=24.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t 44 (249)
..+|+++ |.|.+- ..+++.|.++|++|+++..
T Consensus 4 ~m~i~Ii---G~G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIA---GIGRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE---CCCHHH--HHHHHHHHhCCCeEEEEEC
Confidence 3578877 447764 4678999999999999865
No 63
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=41.73 E-value=16 Score=27.97 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=16.7
Q ss_pred HHHHHHHhhCCCcEEEEcC
Q 041611 26 LDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 26 l~La~~La~~G~~VT~~~t 44 (249)
+.+|..|+++|++||++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 6789999999999999953
No 64
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=41.64 E-value=1.1e+02 Score=22.82 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=57.8
Q ss_pred CCcEEEecCCcc---cHHHHHhHcCCceEEEecchHHHHHHHHhhhccCCCCCCCccccCCCCCCCccccccCCChhhcc
Q 041611 113 PPVAILSDFFLG---WTLKLAHQLNIVRIAFFSSGWLLASVADYCWHHIGDVKSLDVVEFPDLPRYPVFKRRHLPSMVRS 189 (249)
Q Consensus 113 ~~~~vI~D~~~~---~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~dlp~~~~~ 189 (249)
.+.-||+-.-.+ .+.++|.++|||+-.+++-+- ..+|+. +|. .++..+.|.
T Consensus 7 ~~~kIiSGGQTGvDraALd~A~~~gi~~gGwcP~GR--------------~aEDG~------ip~--~Y~L~E~~~---- 60 (158)
T 3imk_A 7 AITKIISGGQTGADRAALDFAIKHHIPYGGWVPKGR--------------LAEGGR------VPE--TYQLQEMPT---- 60 (158)
T ss_dssp CCCEEECCCCTTHHHHHHHHHHHTTCCEECEECGGG--------------CCTTSS------CCT--TSCCEECSS----
T ss_pred cceEEeeCCcchHHHHHHHHHHHcCCCcceecCCCc--------------ccccCC------CCc--cccccccCC----
Confidence 356677766543 457999999999987765421 223321 232 134333332
Q ss_pred cCCCCchhhHHHHHHHhhhcCcEEeecchhhhhHHHHHHH--HHHhCCCCeEEe
Q 041611 190 YKESDPESQFVKDGNLANTSSWGCVFNSFDALEGEYSDYL--KRKMGHDRVFGV 241 (249)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~a~~vl~NTf~eLE~~~~~~l--~~~~~~~~v~~V 241 (249)
..+..+...++.+||+.|+=++.+|.+...-.+ ....+ +|++-|
T Consensus 61 -------~~y~~Rt~~NV~DSDgTLI~~~g~lsGGT~lT~~~a~~~~-KP~l~i 106 (158)
T 3imk_A 61 -------SDYSKRTEKNVLDSDGTLIISHGILKGGSALTEFFAEQYK-KPCLHI 106 (158)
T ss_dssp -------CCHHHHHHHHHHTSSEEEEEESSSCCHHHHHHHHHHHHTT-CCEEEE
T ss_pred -------CCHHHHHHHhhhhcCeEEEEecCCCCCchHHHHHHHHHhC-CCEEEE
Confidence 124466677888999988888899988644332 23445 777755
No 65
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=40.72 E-value=36 Score=24.27 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=23.0
Q ss_pred CCcEEEecCCccc--HHHHHhHc-------CCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQL-------NIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 144 (249)
+||+||.|..++. +.++++++ ++|.+.+...+
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 7999999999874 45666543 47877765543
No 66
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=40.39 E-value=1.7e+02 Score=24.83 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCCcEEEe--cCCcccHHHHHhHcCCce
Q 041611 102 PIIDWFRSQANPPVAILS--DFFLGWTLKLAHQLNIVR 137 (249)
Q Consensus 102 ~l~~ll~~~~~~~~~vI~--D~~~~~~~~vA~~lgiP~ 137 (249)
.++++.++. ++|.|+. |.....+..+|+++|+|.
T Consensus 66 ~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 VVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 344555555 8998875 444555678889999983
No 67
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.25 E-value=26 Score=24.77 Aligned_cols=34 Identities=21% Similarity=0.051 Sum_probs=22.5
Q ss_pred HHHHhCCCCCcEEEecCCccc--HHHHHh---HcCCceEEE
Q 041611 105 DWFRSQANPPVAILSDFFLGW--TLKLAH---QLNIVRIAF 140 (249)
Q Consensus 105 ~ll~~~~~~~~~vI~D~~~~~--~~~vA~---~lgiP~v~~ 140 (249)
+++++. +||+||.|..++. +.++++ +.++|.+.+
T Consensus 47 ~~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 47 DIARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 344555 8999999998864 345554 457776543
No 68
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=39.04 E-value=33 Score=26.12 Aligned_cols=42 Identities=14% Similarity=0.213 Sum_probs=31.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccc
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPIL 51 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~ 51 (249)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+...+.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 35666666665544 6789999999999999999998655444
No 69
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=38.22 E-value=54 Score=21.98 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=22.1
Q ss_pred CCcEEEecCCccc--HHHHHhHc-------CCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQL-------NIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 144 (249)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 7999999988753 34555443 57887776543
No 70
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.08 E-value=45 Score=26.34 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=28.0
Q ss_pred HHHHHHHHhC-CCCCcEEEecCCcccHHHHHhHcCCceEEEec
Q 041611 101 DPIIDWFRSQ-ANPPVAILSDFFLGWTLKLAHQLNIVRIAFFS 142 (249)
Q Consensus 101 ~~l~~ll~~~-~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~ 142 (249)
+.+++.++++ ..++++||-|.. +.+.|+++|+|.+...+
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3444444333 137999998754 68999999999999884
No 71
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=35.77 E-value=50 Score=29.61 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=55.0
Q ss_pred CCCCCCCC-ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccccccccCCCCceEEEecCCCCCCCCCCCC
Q 041611 1 MSSSNTRT-THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPILSPLLDAHPAIKTLVLPFPSHPSIPPGIE 79 (249)
Q Consensus 1 m~~~~~~~-~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~lp~~~~~~lp~~~~ 79 (249)
|.+.++.+ .+-+++.. .+=.-++.+|+.|.+.|++| +.|....+.++. .++....+.-. .++|+-.+
T Consensus 1 ~~~~~~~~~i~~aLISV---sDK~glvelAk~L~~lGfeI--~ATgGTak~L~e-----~GI~v~~V~~v--TgfPEil~ 68 (523)
T 3zzm_A 1 MSTDDGRRPIRRALISV---YDKTGLVDLAQGLSAAGVEI--ISTGSTAKTIAD-----TGIPVTPVEQL--TGFPEVLD 68 (523)
T ss_dssp ---CCCCCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEE--EECHHHHHHHHT-----TTCCCEEHHHH--HSCCCCTT
T ss_pred CCcccccccccEEEEEE---eccccHHHHHHHHHHCCCEE--EEcchHHHHHHH-----cCCceeecccc--CCCchhhC
Confidence 55554433 34455655 44555889999999999775 566666555554 35555444311 24554221
Q ss_pred ccccCCCCCcHHHHHHH---HhcHHHHHHHHHhCCCCCcEEEecCC
Q 041611 80 NVRELGNRGNYPIMTAL---GKLYDPIIDWFRSQANPPVAILSDFF 122 (249)
Q Consensus 80 ~~~~~~~~~~~~~~~~~---~~l~~~l~~ll~~~~~~~~~vI~D~~ 122 (249)
- ... .+...+.-.. +......+++-+..=.++|+||++.+
T Consensus 69 G--RVK-TLHP~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 69 G--RVK-TLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp T--TSS-SCSHHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred C--ccc-cCCchhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 1 010 1222333222 23445555544332248999999874
No 72
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=34.92 E-value=51 Score=25.48 Aligned_cols=41 Identities=12% Similarity=0.146 Sum_probs=31.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHhhC-CCcEEEEcCCCCcccc
Q 041611 10 HILIFPYPAQGHMLPLLDLTHQLSLK-DLDITILVTPKNLPIL 51 (249)
Q Consensus 10 hvvl~p~p~~GHi~P~l~La~~La~~-G~~VT~~~t~~~~~~~ 51 (249)
+|++.-..+.|-+. ...|.+.|.++ |++|.++.|+...+.+
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 56666666666655 89999999998 9999999987654433
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=34.64 E-value=21 Score=28.84 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=20.3
Q ss_pred CCCCChHHHHHHHHHHhhCCCcEEEEcC
Q 041611 17 PAQGHMLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 17 p~~GHi~P~l~La~~La~~G~~VT~~~t 44 (249)
.+.|.+- .+|+++|.++||+|+.++-
T Consensus 7 GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 7 GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 3446554 5789999999999999874
No 74
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=34.42 E-value=49 Score=30.22 Aligned_cols=43 Identities=12% Similarity=-0.018 Sum_probs=37.6
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcc
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLP 49 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~ 49 (249)
.+.+||+.+.++-.|-+...-++..|..+|++|..+...-..+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e 139 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAE 139 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4678999999999999999999999999999999987754433
No 75
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.17 E-value=17 Score=32.31 Aligned_cols=35 Identities=11% Similarity=0.285 Sum_probs=26.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 6 TRTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 6 ~~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
.+++|||++=.-.-| +.+|++|..+|++||+|...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 457899988543333 57899999999999999754
No 76
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.85 E-value=22 Score=26.15 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=27.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
.+++++.- +.| +.|++.+++.|.++|.+|+++ ...+
T Consensus 24 ~~~llIaG-G~G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGA-YTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEE-TTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEc-cCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 35555543 334 899999999999989899999 6544
No 77
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=33.67 E-value=41 Score=26.20 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=32.4
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhh-CCCcEEEEcCCCCccccc
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSL-KDLDITILVTPKNLPILS 52 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~-~G~~VT~~~t~~~~~~~~ 52 (249)
++.||++.-..+.+=+ =..+|.++|.+ +|++|.++.|+...+.+.
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 4567887777766644 46899999998 899999999986654443
No 78
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=33.20 E-value=70 Score=26.14 Aligned_cols=48 Identities=8% Similarity=-0.041 Sum_probs=33.8
Q ss_pred HHHHHHhCCCCCcEEEecCCccc--HHHHHhHcCCceEEEecchHHHHHHHH
Q 041611 103 IIDWFRSQANPPVAILSDFFLGW--TLKLAHQLNIVRIAFFSSGWLLASVAD 152 (249)
Q Consensus 103 l~~ll~~~~~~~~~vI~D~~~~~--~~~vA~~lgiP~v~~~~~~a~~~~~~~ 152 (249)
+.+.+++. ++.||+++....- +..+|++.|++.+.+.+.+...+.++.
T Consensus 229 l~~~ik~~--~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m~ 278 (291)
T 1pq4_A 229 LIDTAKEN--NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNLK 278 (291)
T ss_dssp HHHHHHTT--TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHc--CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHHH
Confidence 33344444 8999999987654 458899999999988877664444443
No 79
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=32.47 E-value=17 Score=31.11 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=24.9
Q ss_pred cCcEEeecchhhhhHHHHHHHHHHhCCCCeEEeCcCCC
Q 041611 209 SSWGCVFNSFDALEGEYSDYLKRKMGHDRVFGVGPLSL 246 (249)
Q Consensus 209 ~a~~vl~NTf~eLE~~~~~~l~~~~~~~~v~~VGPl~~ 246 (249)
.++++++|+++++|+.. ...+ ++++.|||++.
T Consensus 209 ~~~~~l~~~~~~l~~~~-----~~~~-~~~~~vGp~~~ 240 (424)
T 2iya_A 209 APNRCIVALPRTFQIKG-----DTVG-DNYTFVGPTYG 240 (424)
T ss_dssp CCSSEEESSCTTTSTTG-----GGCC-TTEEECCCCCC
T ss_pred CCCcEEEEcchhhCCCc-----cCCC-CCEEEeCCCCC
Confidence 57899999999999753 2344 67999999763
No 80
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=32.00 E-value=62 Score=24.76 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=32.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCcccc
Q 041611 9 THILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPIL 51 (249)
Q Consensus 9 ~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~~ 51 (249)
.||++.-..+.|-+ =..+|.++|.++|++|.++.|+...+.+
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i 43 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVL 43 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHh
Confidence 47887777777755 4789999999999999999987654433
No 81
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=31.50 E-value=85 Score=21.44 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=23.4
Q ss_pred HHHhCCCCCcEEEecCCccc--HHHHHhHc-------CCceEEEecch
Q 041611 106 WFRSQANPPVAILSDFFLGW--TLKLAHQL-------NIVRIAFFSSG 144 (249)
Q Consensus 106 ll~~~~~~~~~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 144 (249)
.+++. ++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 43 ~~~~~--~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 43 QIYKN--LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHhC--CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 34444 7999999988753 34444332 57777766543
No 82
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.31 E-value=35 Score=27.17 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=20.7
Q ss_pred CCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 19 QGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 19 ~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
.|.+- ..+|++++.+|++||++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 56543 467999999999999998764
No 83
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=31.05 E-value=44 Score=26.08 Aligned_cols=40 Identities=8% Similarity=-0.067 Sum_probs=28.7
Q ss_pred CceEEEEcCCCCCChHH-HHHHHHHHhhCCCcEEEEcCCCCc
Q 041611 8 TTHILIFPYPAQGHMLP-LLDLTHQLSLKDLDITILVTPKNL 48 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P-~l~La~~La~~G~~VT~~~t~~~~ 48 (249)
..+|++.-..+ +...- ...|.++|.++|++|.++.|+...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 35777655555 44554 789999999999999999988654
No 84
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=30.83 E-value=63 Score=25.72 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=27.5
Q ss_pred ceEEEEcC--CCCCChHHHHHHHHHHhhCCCcEEEEc
Q 041611 9 THILIFPY--PAQGHMLPLLDLTHQLSLKDLDITILV 43 (249)
Q Consensus 9 ~hvvl~p~--p~~GHi~P~l~La~~La~~G~~VT~~~ 43 (249)
.+.+++.. ...|=-.-.+.|++.|+++|.+|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34444443 566888889999999999999999974
No 85
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.39 E-value=66 Score=23.06 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=24.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
..+|+++ |.|.+- ..+++.|..+|++|+++...
T Consensus 19 ~~~v~Ii---G~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIF---GCGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEE---CCCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 4578877 346654 45788999999999998753
No 86
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=30.30 E-value=80 Score=23.37 Aligned_cols=41 Identities=22% Similarity=0.414 Sum_probs=29.7
Q ss_pred ceEE-EEcCCCCCChHH-HHHHHHHHhhCCCcEEEEcCCCCcc
Q 041611 9 THIL-IFPYPAQGHMLP-LLDLTHQLSLKDLDITILVTPKNLP 49 (249)
Q Consensus 9 ~hvv-l~p~p~~GHi~P-~l~La~~La~~G~~VT~~~t~~~~~ 49 (249)
.+++ ++-.|-.-=.+| .+-|+.+|..+|++||+..++...+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlk 49 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALR 49 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHh
Confidence 3444 555665544555 6889999999999999999875543
No 87
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=29.60 E-value=50 Score=29.08 Aligned_cols=32 Identities=9% Similarity=0.183 Sum_probs=18.5
Q ss_pred CceEEEEcCCCCCChHH--HHHHHHHHhhCCCcEEEE
Q 041611 8 TTHILIFPYPAQGHMLP--LLDLTHQLSLKDLDITIL 42 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P--~l~La~~La~~G~~VT~~ 42 (249)
+..|-++|.. +.+| +-+|-+.|..-|.+|..+
T Consensus 169 ~~~VNii~G~---~~~~~D~~eik~lL~~~Gi~v~~~ 202 (458)
T 3pdi_B 169 PRQVNVLCSA---NLTPGDLEYIAESIESFGLRPLLI 202 (458)
T ss_dssp SSEEEEEECT---TCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCeEEEEeCC---CCChHHHHHHHHHHHHcCCEEEEe
Confidence 3456666422 1233 566666667777777765
No 88
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=29.36 E-value=69 Score=22.22 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=23.0
Q ss_pred HHHhCCCCCcEEEecCCccc--HHHHHhHc---------CCceEEEecc
Q 041611 106 WFRSQANPPVAILSDFFLGW--TLKLAHQL---------NIVRIAFFSS 143 (249)
Q Consensus 106 ll~~~~~~~~~vI~D~~~~~--~~~vA~~l---------giP~v~~~~~ 143 (249)
.+++. ++|+||.|..++. +.++.+++ .+|.+++...
T Consensus 53 ~~~~~--~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 53 AMAEE--DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 34444 7999999987754 34555443 2677776554
No 89
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=27.96 E-value=2.2e+02 Score=22.32 Aligned_cols=38 Identities=8% Similarity=-0.008 Sum_probs=29.2
Q ss_pred ceEEEEcCC-CCCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 9 THILIFPYP-AQGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 9 ~hvvl~p~p-~~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
..|-++..+ +.|=-.=+++.++++..+|.+|-++++..
T Consensus 28 G~I~vitG~M~sGKTT~Llr~~~r~~~~g~kvli~kp~~ 66 (219)
T 3e2i_A 28 GWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAI 66 (219)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEC-
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 356667665 77888889999999999999987777543
No 90
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=26.52 E-value=56 Score=25.15 Aligned_cols=43 Identities=9% Similarity=0.012 Sum_probs=32.5
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCCCCccc
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTPKNLPI 50 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~~~~~~ 50 (249)
+..||++.-..+.|=+. ..+|.+.|.++|++|.++.|+...+.
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 34578777666665554 78999999999999999998754433
No 91
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=26.48 E-value=1.1e+02 Score=20.13 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=23.6
Q ss_pred HHHhCCCCCcEEEecCCccc--HHHHHh----HcCCceEEEecch
Q 041611 106 WFRSQANPPVAILSDFFLGW--TLKLAH----QLNIVRIAFFSSG 144 (249)
Q Consensus 106 ll~~~~~~~~~vI~D~~~~~--~~~vA~----~lgiP~v~~~~~~ 144 (249)
.+++. ++|+||.|.-++. +.++.+ ..++|.+++....
T Consensus 41 ~~~~~--~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 41 MVEEL--QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHTT--CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHhhC--CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 34444 7999999987754 234433 3468877766543
No 92
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=26.18 E-value=2.6e+02 Score=22.52 Aligned_cols=33 Identities=27% Similarity=0.217 Sum_probs=23.8
Q ss_pred CCCcEE-EecCCc-ccHHHHHhHcCCceEEEecch
Q 041611 112 NPPVAI-LSDFFL-GWTLKLAHQLNIVRIAFFSSG 144 (249)
Q Consensus 112 ~~~~~v-I~D~~~-~~~~~vA~~lgiP~v~~~~~~ 144 (249)
..||+| |.|.-. .-+..-|.++|||.|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 357765 568754 345678999999999886543
No 93
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.36 E-value=1.1e+02 Score=20.57 Aligned_cols=32 Identities=28% Similarity=0.187 Sum_probs=21.2
Q ss_pred CCcEEEecCCcc---cHHHHHhH----cCCceEEEecch
Q 041611 113 PPVAILSDFFLG---WTLKLAHQ----LNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~---~~~~vA~~----lgiP~v~~~~~~ 144 (249)
++|+||.|..+. .+.++.++ .++|++++....
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999998663 23444433 478888776543
No 94
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=25.05 E-value=1e+02 Score=21.82 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=26.9
Q ss_pred ceEE-EEcCC--CCCChHHHHHHHHHHhhCCCcEEEEcCCC
Q 041611 9 THIL-IFPYP--AQGHMLPLLDLTHQLSLKDLDITILVTPK 46 (249)
Q Consensus 9 ~hvv-l~p~p--~~GHi~P~l~La~~La~~G~~VT~~~t~~ 46 (249)
.+++ ++..+ .......-+.||...++.|++|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 4555 34444 34566788889998899999999886653
No 95
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=24.81 E-value=40 Score=28.19 Aligned_cols=26 Identities=8% Similarity=0.086 Sum_probs=20.4
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 20 GHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 20 GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
|.+- ..+|+.+..+|++||+++.+..
T Consensus 65 GkmG--~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 65 GRRG--ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CHHH--HHHHHHHHHTTCEEEEEEETTS
T ss_pred cHHH--HHHHHHHHHCCCEEEEEecCCC
Confidence 5443 4578999999999999997654
No 96
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.41 E-value=1.5e+02 Score=20.52 Aligned_cols=33 Identities=15% Similarity=0.045 Sum_probs=21.3
Q ss_pred CCcEEEecCCccc--HHHHHhH-----cCCceEEEecchH
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ-----LNIVRIAFFSSGW 145 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~a 145 (249)
++|+||.|.-++. +.++.++ -++|.+++.....
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 51 SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 7999999987642 3344332 2688887765543
No 97
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=24.35 E-value=1.5e+02 Score=20.01 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=22.3
Q ss_pred HHHhCCCCCcEEEecCCccc--HHHHHhHc-------CCceEEEecc
Q 041611 106 WFRSQANPPVAILSDFFLGW--TLKLAHQL-------NIVRIAFFSS 143 (249)
Q Consensus 106 ll~~~~~~~~~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~ 143 (249)
.+++. ++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 42 ~l~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 42 ALNAT--PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHhcc--CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 34444 7999999987753 34444332 5677766543
No 98
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=23.50 E-value=50 Score=26.99 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=36.2
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHhhC--CCcEEEEcCCCCccccc
Q 041611 10 HILIFPYPAQGHMLPLLDLTHQLSLK--DLDITILVTPKNLPILS 52 (249)
Q Consensus 10 hvvl~p~p~~GHi~P~l~La~~La~~--G~~VT~~~t~~~~~~~~ 52 (249)
+|+++-.-+.|.+.=...+.+.|.++ +.+||+++.+.+.+.+.
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 68899888999999999999999886 89999999876654443
No 99
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=23.20 E-value=47 Score=27.47 Aligned_cols=18 Identities=6% Similarity=-0.034 Sum_probs=16.1
Q ss_pred HHHHHHHhhCCCcEEEEc
Q 041611 26 LDLTHQLSLKDLDITILV 43 (249)
Q Consensus 26 l~La~~La~~G~~VT~~~ 43 (249)
+.+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 568899999999999995
No 100
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=23.10 E-value=57 Score=26.80 Aligned_cols=38 Identities=11% Similarity=0.222 Sum_probs=28.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhC-C-CcEEEEcCCC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLK-D-LDITILVTPK 46 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~-G-~~VT~~~t~~ 46 (249)
+++|+++. ...++......+++.|+++ | ++|+++++..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 46888775 3356777888999999987 5 8887776654
No 101
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.59 E-value=57 Score=22.83 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=24.9
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcC
Q 041611 8 TTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 8 ~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t 44 (249)
..||+++-+ |.+ -..+++.|.++|++|+++..
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEEC
Confidence 457887744 654 46799999999999999875
No 102
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=22.47 E-value=1.4e+02 Score=22.12 Aligned_cols=34 Identities=18% Similarity=0.060 Sum_probs=25.7
Q ss_pred EEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcC
Q 041611 11 ILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 11 vvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t 44 (249)
+|++-....|+-.-+..+++.|+++|+.|..+..
T Consensus 34 ~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 4444444667778899999999999988777654
No 103
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.95 E-value=1.6e+02 Score=19.44 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=20.5
Q ss_pred CCcEEEecCCccc--HHHHHhH-----cCCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ-----LNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 144 (249)
++|+||.|.-++. +.++.++ -++|.+++....
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 7999999987653 3344433 257777765543
No 104
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=21.95 E-value=63 Score=25.54 Aligned_cols=25 Identities=16% Similarity=0.383 Sum_probs=19.2
Q ss_pred CCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 19 QGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 19 ~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
.|-+ -..+|++|+++|++|+++...
T Consensus 33 Sg~i--G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKM--GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred ccHH--HHHHHHHHHHCCCEEEEEECC
Confidence 4544 356889999999999998654
No 105
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=21.85 E-value=1.5e+02 Score=19.91 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=22.7
Q ss_pred HHHHhCCCCCcEEEecCCcc-------cHHHHHhH-----cCCceEEEecch
Q 041611 105 DWFRSQANPPVAILSDFFLG-------WTLKLAHQ-----LNIVRIAFFSSG 144 (249)
Q Consensus 105 ~ll~~~~~~~~~vI~D~~~~-------~~~~vA~~-----lgiP~v~~~~~~ 144 (249)
+.+++. ++|+||.|.-+. .+.++.++ -++|++++....
T Consensus 41 ~~l~~~--~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 41 TVLREE--NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHS--CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHcC--CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 334444 799999998654 23333332 257877776544
No 106
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.78 E-value=74 Score=28.17 Aligned_cols=35 Identities=6% Similarity=0.037 Sum_probs=26.0
Q ss_pred HHHHHHHhCCCCCcEEEecCCcccHHHHHhHcCCceEEEe
Q 041611 102 PIIDWFRSQANPPVAILSDFFLGWTLKLAHQLNIVRIAFF 141 (249)
Q Consensus 102 ~l~~ll~~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~~~ 141 (249)
.+++++++. ++|++|.. .....+|+++|||.+-+.
T Consensus 392 el~~~i~~~--~pDL~ig~---~~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 392 VLLKTVDEY--QADILIAG---GRNMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHT--TCSEEECC---GGGHHHHHHTTCCBCCCC
T ss_pred HHHHHHHhc--CCCEEEEC---CchhHHHHHcCCCEEEec
Confidence 355566666 89999974 356788999999997543
No 107
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.65 E-value=1.4e+02 Score=24.37 Aligned_cols=47 Identities=21% Similarity=0.322 Sum_probs=29.8
Q ss_pred CCCCCCCCceEEEEcCCCCCCh-HHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 1 MSSSNTRTTHILIFPYPAQGHM-LPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 1 m~~~~~~~~hvvl~p~p~~GHi-~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
|-....++..+++-|..+.|.. .-.-++.+.|.++|+++++..|...
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 4433344555666666677663 3345677888889999999877654
No 108
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.54 E-value=98 Score=27.07 Aligned_cols=18 Identities=6% Similarity=0.276 Sum_probs=11.8
Q ss_pred HHHHHHHHhhCCCcEEEE
Q 041611 25 LLDLTHQLSLKDLDITIL 42 (249)
Q Consensus 25 ~l~La~~La~~G~~VT~~ 42 (249)
+-+|-+.|..-|.+|..+
T Consensus 184 ~~eik~lL~~~Gi~v~~l 201 (458)
T 1mio_B 184 MREIKRLFEAMDIPYIMF 201 (458)
T ss_dssp HHHHHHHHHHHTCCEEES
T ss_pred HHHHHHHHHHcCCcEEEe
Confidence 466666666677777663
No 109
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=21.27 E-value=1.7e+02 Score=23.24 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=26.7
Q ss_pred eEEEEcC--CCCCChHHHHHHHHHHhhCCCcEEEEc
Q 041611 10 HILIFPY--PAQGHMLPLLDLTHQLSLKDLDITILV 43 (249)
Q Consensus 10 hvvl~p~--p~~GHi~P~l~La~~La~~G~~VT~~~ 43 (249)
+.+++.. ...|=-.-.+.|++.|.++|.+|.++-
T Consensus 27 ~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 27 TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4444433 466888889999999999999999974
No 110
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.84 E-value=65 Score=22.70 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=25.8
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHhhCCCcEEEEcCC
Q 041611 7 RTTHILIFPYPAQGHMLPLLDLTHQLSLKDLDITILVTP 45 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi~P~l~La~~La~~G~~VT~~~t~ 45 (249)
-+.||+++-+ |.+ -..+++.|.++|++|+++...
T Consensus 6 ~~~~viIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVGY---GRV--GSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCSCEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEECc---CHH--HHHHHHHHHHCCCCEEEEECC
Confidence 3568888754 443 357889999999999999864
No 111
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.84 E-value=1.4e+02 Score=24.28 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEEcC
Q 041611 22 MLPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 22 i~P~l~La~~La~~G~~VT~~~t 44 (249)
+.|+-.+++.++.-..+|+ +.+
T Consensus 19 ~~pl~~~v~~I~Gd~v~V~-lv~ 40 (286)
T 3gi1_A 19 FYPMYAMTKEVSGDLNDVR-MIQ 40 (286)
T ss_dssp SHHHHHHHHHHHTTSSEEE-EC-
T ss_pred cHHHHHHHHHHhCCeeEEE-EcC
Confidence 5677777777776666777 554
No 112
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.75 E-value=1.7e+02 Score=19.71 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=19.8
Q ss_pred CCcEEEecCCccc--HHHHHhH-----cCCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ-----LNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 144 (249)
++|+||.|. +.. +.++.++ -++|++++....
T Consensus 48 ~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 48 KIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp CCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred CCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 799999998 653 2333332 258887776543
No 113
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=20.68 E-value=1.6e+02 Score=23.76 Aligned_cols=31 Identities=3% Similarity=-0.097 Sum_probs=21.0
Q ss_pred CCcEEEecCCccc--HHHHHhHcCCceEEEecc
Q 041611 113 PPVAILSDFFLGW--TLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~lgiP~v~~~~~ 143 (249)
++.||+++....- +..+|++.|++.+.+.+.
T Consensus 223 ~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld~l 255 (284)
T 2prs_A 223 KATCVFAEPQFRPAVVESVARGTSVRMGTLDPL 255 (284)
T ss_dssp TCCEEEECTTSCSHHHHHHTTTSCCEEEECCTT
T ss_pred CCCEEEEeCCCChHHHHHHHHHcCCeEEEeccC
Confidence 6788888766543 357788888887765443
No 114
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=20.45 E-value=85 Score=26.20 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=26.1
Q ss_pred eEEEE-c-CCCC-CChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 10 HILIF-P-YPAQ-GHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 10 hvvl~-p-~p~~-GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
+|+++ + +|.. |.-.-...|++.|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 56655 3 2333 4456678999999999 99999885433
No 115
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=20.42 E-value=1.9e+02 Score=19.14 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=20.7
Q ss_pred CCcEEEecCCccc--HHHHHhHc-------CCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQL-------NIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 144 (249)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 6899999987753 34554432 46777765543
No 116
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.35 E-value=1.5e+02 Score=20.57 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=20.0
Q ss_pred CCcEEEecCCccc--HHHHHhH-------cCCceEEEecc
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ-------LNIVRIAFFSS 143 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~~ 143 (249)
++|+||.|.-++. +.++.++ -++|.+++...
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 51 RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 7999999987643 3344332 35787776654
No 117
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.29 E-value=1e+02 Score=24.09 Aligned_cols=31 Identities=10% Similarity=-0.079 Sum_probs=24.0
Q ss_pred CCcEEEecCCcccHHHHHhHcCCceEEEecc
Q 041611 113 PPVAILSDFFLGWTLKLAHQLNIVRIAFFSS 143 (249)
Q Consensus 113 ~~~~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 143 (249)
.+.+||+|---..+...|+++|||++.+.+.
T Consensus 31 eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 31 EVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp EEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred EEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 5788999854344678999999999987654
No 118
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=20.25 E-value=1.9e+02 Score=18.74 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=20.7
Q ss_pred CCcEEEecCCccc--HHHHHhH-----cCCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ-----LNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 144 (249)
++|+||.|..++. +.++.++ -++|.+++....
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 7899999987753 3444443 257777665543
No 119
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=20.21 E-value=1.7e+02 Score=19.70 Aligned_cols=32 Identities=9% Similarity=-0.041 Sum_probs=20.9
Q ss_pred CCcEEEecCCccc--HHHHHhH----cCCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAHQ----LNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~~----lgiP~v~~~~~~ 144 (249)
++|+||.|.-++. +.++.++ ..+|.+++....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 7999999987652 3444443 267877765543
No 120
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=20.21 E-value=1.8e+02 Score=18.67 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=21.1
Q ss_pred CCcEEEecCCccc--HHHHHh----HcCCceEEEecch
Q 041611 113 PPVAILSDFFLGW--TLKLAH----QLNIVRIAFFSSG 144 (249)
Q Consensus 113 ~~~~vI~D~~~~~--~~~vA~----~lgiP~v~~~~~~ 144 (249)
++|+||.|..++. +.++.+ .-++|.+++....
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 7999999987652 334433 3468877776544
No 121
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=20.10 E-value=57 Score=27.18 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=16.1
Q ss_pred HHHHHHHhhCCCcEEEEc
Q 041611 26 LDLTHQLSLKDLDITILV 43 (249)
Q Consensus 26 l~La~~La~~G~~VT~~~ 43 (249)
+-+|..|+++|++||++=
T Consensus 14 l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 14 TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEe
Confidence 678889999999999994
No 122
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.05 E-value=1.4e+02 Score=23.89 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCceEEEEcC--CCCCChHHHHHHHHHHhhCCCcEEEEcCCCC
Q 041611 7 RTTHILIFPY--PAQGHMLPLLDLTHQLSLKDLDITILVTPKN 47 (249)
Q Consensus 7 ~~~hvvl~p~--p~~GHi~P~l~La~~La~~G~~VT~~~t~~~ 47 (249)
++.++++|.. ++.|=-.-...||..|+++|.+|.++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3456666654 6889889999999999999999999977543
No 123
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=20.05 E-value=1.2e+02 Score=21.72 Aligned_cols=38 Identities=16% Similarity=0.035 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCCCCh-HHHHHHHHHHhhCCCcEEEEcC
Q 041611 7 RTTHILIFPYPAQGHM-LPLLDLTHQLSLKDLDITILVT 44 (249)
Q Consensus 7 ~~~hvvl~p~p~~GHi-~P~l~La~~La~~G~~VT~~~t 44 (249)
+++.|++++--+.+.- .-.-.+++.|+++|++|..+.-
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 41 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNM 41 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecC
Confidence 3456888877654433 2223345678888988766643
Done!