Query 041616
Match_columns 202
No_of_seqs 156 out of 780
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 15:13:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 1.3E-53 4.6E-58 382.1 17.2 180 1-183 32-275 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 2.2E-49 7.5E-54 353.9 13.8 166 1-181 21-251 (340)
3 3vmv_A Pectate lyase; polysacc 100.0 7.9E-48 2.7E-52 342.3 12.4 163 1-179 14-249 (326)
4 2qy1_A Pectate lyase II; GAG l 100.0 1.2E-47 4.1E-52 341.6 9.2 170 1-182 9-252 (330)
5 1pcl_A Pectate lyase E; lyase 100.0 8.1E-45 2.8E-49 326.2 16.0 166 1-181 18-281 (355)
6 1pe9_A Pectate lyase A; parall 100.0 1.2E-44 3.9E-49 325.8 11.5 167 1-182 24-293 (361)
7 1vbl_A Pectate lyase 47; PL 47 100.0 2.6E-44 9E-49 328.5 12.2 125 59-184 188-338 (416)
8 2o04_A Pectate lyase, PL; hexa 100.0 7.4E-44 2.5E-48 324.2 12.6 120 59-179 182-328 (399)
9 1idk_A Pectin lyase A; signal, 100.0 2.8E-41 9.5E-46 303.6 11.2 161 1-184 14-284 (359)
10 1qcx_A Pectin lyase B; beta-he 100.0 5.2E-41 1.8E-45 301.9 11.7 119 57-184 150-284 (359)
11 1air_A Pectate lyase C, PELC; 100.0 4.8E-41 1.6E-45 301.5 9.4 123 57-183 127-264 (353)
12 3gq8_A Preneck appendage prote 98.0 3E-05 1E-09 73.6 11.3 118 37-164 132-281 (609)
13 3gqn_A Preneck appendage prote 97.9 5.7E-05 2E-09 73.3 11.4 118 37-164 132-281 (772)
14 2uvf_A Exopolygalacturonase; G 97.7 0.00022 7.5E-09 67.6 10.9 115 38-158 330-490 (608)
15 1bhe_A PEHA, polygalacturonase 97.5 0.00026 8.9E-09 63.0 8.8 114 37-158 149-304 (376)
16 3jur_A EXO-poly-alpha-D-galact 97.5 0.00035 1.2E-08 64.1 9.4 101 37-143 188-328 (448)
17 2iq7_A Endopolygalacturonase; 97.4 0.00059 2E-08 60.1 9.6 101 58-163 152-260 (339)
18 1ia5_A Polygalacturonase; glyc 97.4 0.00068 2.3E-08 59.7 9.5 100 59-163 157-264 (339)
19 1rmg_A Rgase A, rhamnogalactur 97.2 0.0017 5.7E-08 58.9 10.3 94 59-159 175-270 (422)
20 1nhc_A Polygalacturonase I; be 96.8 0.0064 2.2E-07 53.3 9.7 81 58-143 151-231 (336)
21 1hg8_A Endopolygalacturonase; 96.8 0.0024 8.3E-08 56.4 7.0 74 59-136 165-238 (349)
22 2pyg_A Poly(beta-D-mannuronate 96.8 0.0089 3.1E-07 52.2 10.5 116 58-177 170-291 (377)
23 1nhc_A Polygalacturonase I; be 96.7 0.01 3.5E-07 52.0 10.0 107 37-157 98-224 (336)
24 1czf_A Polygalacturonase II; b 96.5 0.0067 2.3E-07 53.9 7.6 80 59-143 178-257 (362)
25 1czf_A Polygalacturonase II; b 96.4 0.014 4.7E-07 51.9 9.1 107 37-157 124-250 (362)
26 1k5c_A Endopolygalacturonase; 96.3 0.02 6.8E-07 50.3 9.6 78 58-143 150-227 (335)
27 1k5c_A Endopolygalacturonase; 96.0 0.014 5E-07 51.2 7.3 106 37-157 95-220 (335)
28 3gqn_A Preneck appendage prote 95.6 0.047 1.6E-06 53.1 9.4 85 46-132 183-271 (772)
29 3gq8_A Preneck appendage prote 95.3 0.059 2E-06 51.2 9.0 84 47-132 184-271 (609)
30 1ia5_A Polygalacturonase; glyc 93.5 0.24 8.3E-06 43.3 8.1 109 37-158 102-230 (339)
31 2iq7_A Endopolygalacturonase; 93.1 0.3 1E-05 42.6 8.1 109 37-158 98-226 (339)
32 2pyg_A Poly(beta-D-mannuronate 92.6 0.87 3E-05 39.4 10.4 48 57-104 192-246 (377)
33 1pxz_A Major pollen allergen J 92.5 0.45 1.5E-05 42.0 8.4 90 61-160 106-228 (346)
34 3zsc_A Pectate trisaccharide-l 92.4 0.71 2.4E-05 40.8 9.5 92 60-160 82-196 (340)
35 1h80_A IOTA-carrageenase; hydr 91.3 0.42 1.4E-05 43.9 7.0 93 37-132 130-242 (464)
36 1x0c_A Isopullulanase; glycosi 91.3 0.34 1.2E-05 45.3 6.5 79 48-136 322-405 (549)
37 1ogo_X Dextranase; hydrolase, 91.2 0.33 1.1E-05 45.7 6.3 68 59-136 374-443 (574)
38 1rmg_A Rgase A, rhamnogalactur 90.8 0.51 1.7E-05 42.5 6.9 108 38-158 126-246 (422)
39 1dbg_A Chondroitinase B; beta 89.7 0.8 2.7E-05 42.4 7.4 38 68-107 93-140 (506)
40 1idk_A Pectin lyase A; signal, 89.7 2 6.8E-05 38.0 9.7 91 61-160 124-235 (359)
41 1qcx_A Pectin lyase B; beta-he 89.1 3.7 0.00013 36.2 11.1 140 1-160 14-235 (359)
42 2uvf_A Exopolygalacturonase; G 89.1 1.9 6.4E-05 40.6 9.6 74 57-132 399-487 (608)
43 1hg8_A Endopolygalacturonase; 88.3 0.83 2.9E-05 40.0 6.3 72 58-132 186-264 (349)
44 1dbg_A Chondroitinase B; beta 88.1 0.84 2.9E-05 42.3 6.4 12 69-80 196-207 (506)
45 3jur_A EXO-poly-alpha-D-galact 86.8 1.6 5.5E-05 39.6 7.4 74 57-132 257-348 (448)
46 1pcl_A Pectate lyase E; lyase 85.6 5.1 0.00017 35.3 9.8 96 62-160 97-229 (355)
47 1x0c_A Isopullulanase; glycosi 85.1 1.7 5.7E-05 40.6 6.7 105 38-157 277-404 (549)
48 3vmv_A Pectate lyase; polysacc 84.5 3.2 0.00011 36.3 7.9 92 62-159 96-205 (326)
49 1bhe_A PEHA, polygalacturonase 84.4 2.9 0.0001 36.7 7.7 76 57-136 220-304 (376)
50 2qy1_A Pectate lyase II; GAG l 83.3 4.6 0.00016 35.2 8.4 97 61-159 86-205 (330)
51 1h80_A IOTA-carrageenase; hydr 82.7 9.1 0.00031 34.9 10.5 83 44-132 173-268 (464)
52 1vbl_A Pectate lyase 47; PL 47 82.4 5.1 0.00017 36.2 8.5 143 1-159 21-283 (416)
53 1ogo_X Dextranase; hydrolase, 81.5 1.3 4.6E-05 41.6 4.5 82 38-132 317-412 (574)
54 1air_A Pectate lyase C, PELC; 80.7 8.2 0.00028 34.0 9.1 138 7-159 18-216 (353)
55 2inu_A Insulin fructotransfera 76.3 14 0.00047 33.4 9.2 72 57-137 228-300 (410)
56 2o04_A Pectate lyase, PL; hexa 75.5 9.8 0.00034 34.1 8.1 141 1-159 21-277 (399)
57 1ru4_A Pectate lyase, PEL9A; p 74.6 13 0.00044 33.1 8.7 21 60-80 151-172 (400)
58 1pe9_A Pectate lyase A; parall 72.7 12 0.00042 33.0 7.9 96 62-159 104-239 (361)
59 1ru4_A Pectate lyase, PEL9A; p 67.0 7.9 0.00027 34.5 5.5 48 56-104 125-172 (400)
60 2inu_A Insulin fructotransfera 61.4 19 0.00066 32.5 6.9 119 62-184 163-304 (410)
61 2x6w_A Tail spike protein; vir 45.4 58 0.002 30.8 7.6 37 39-77 178-218 (600)
62 2x6w_A Tail spike protein; vir 34.6 27 0.00091 33.1 3.5 85 58-159 227-313 (600)
63 2vbk_A Tailspike-protein; vira 25.5 88 0.003 28.9 5.1 53 84-139 210-288 (514)
64 3t9g_A Pectate lyase; PL3, par 25.0 1.5E+02 0.005 24.0 5.9 24 43-66 49-72 (196)
65 1gq8_A Pectinesterase; hydrola 23.5 3.4E+02 0.012 23.0 8.6 83 4-103 65-153 (319)
66 1ee6_A Pectate lyase; parallel 20.0 2.4E+02 0.0081 22.8 6.2 28 39-67 42-69 (197)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=1.3e-53 Score=382.09 Aligned_cols=180 Identities=46% Similarity=0.781 Sum_probs=163.6
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhhhCCCceEEEEeeCeEEEeee--------------------------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAILIPQKVWTTYRKHMNITLHK-------------------------- 54 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~~~~p~~IvF~~~g~I~l~~-------------------------- 54 (202)
.||||||+| |+||+|+|++++|+|||||+|+++ ++||||+|+++|+|+|+.
T Consensus 32 ttGG~gG~v--~~VT~~~d~~~~~~~GsLr~av~~-~~P~~Ivf~~~g~I~l~~~l~V~sn~TI~G~ga~~~i~G~G~gi 108 (346)
T 1pxz_A 32 TMGGKGGDF--YTVTSTDDNPVNPTPGTLRYGATR-EKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCL 108 (346)
T ss_dssp CCTTTTSEE--EEECCCCCCTTSCCTTSHHHHHHC-SSCEEEEESSCEEECCSSCEECCSSEEEECTTSCEEEETTSCCE
T ss_pred CcCCCCccE--EEECChHHcccccCcchhHHHhcc-CCCeEEEEcCCcEEecCccEEecCCeEEEccCCceEEeCCcceE
Confidence 489999999 999999999999999999999999 999999999999998651
Q ss_pred ------------c--C----------------------CCCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEe
Q 041616 55 ------------L--R----------------------KIDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTIS 98 (202)
Q Consensus 55 ------------I--~----------------------~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS 98 (202)
| . .+++|+|+|++++|||||||+|+|+.||++|++.++++||||
T Consensus 109 ~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTIS 188 (346)
T 1pxz_A 109 FMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITIS 188 (346)
T ss_dssp EEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEE
T ss_pred EEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEE
Confidence 0 1 167899999999999999999999999999999999999999
Q ss_pred cceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcccCCeEEEECceEECccceEEcccc--cccccCcce
Q 041616 99 NNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWTQYTIGKAN--LKYTEEQKC 176 (202)
Q Consensus 99 ~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~~yaig~~~--~~y~~~~~f 176 (202)
||+|++|+|++|+|++|+...|..+++|||||+|++++.+|+||+|+|.+|++||||++|+.|++++++ .+++|+|+|
T Consensus 189 nn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~~hv~NN~~~~~~~~~i~~~~~~~i~~egN~F 268 (346)
T 1pxz_A 189 NNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSF 268 (346)
T ss_dssp SCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEEEESCEECCCSSCSEEEESCCEEEEESCEE
T ss_pred eeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecceEEEEeeEEEcccceEEeccCCceEEEECCEE
Confidence 999999999999999998777778999999999977999999999999999999999999999988654 667788888
Q ss_pred EecCCcc
Q 041616 177 QVANAKS 183 (202)
Q Consensus 177 ~~~~~s~ 183 (202)
...|.++
T Consensus 269 ~~~~~~~ 275 (346)
T 1pxz_A 269 TAPSESY 275 (346)
T ss_dssp ECCSCGG
T ss_pred ECCCCCc
Confidence 7776543
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-49 Score=353.89 Aligned_cols=166 Identities=28% Similarity=0.391 Sum_probs=148.3
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhhhCCCceEEEEeeCeEEEee--e------------------------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAILIPQKVWTTYRKHMNITLH--K------------------------ 54 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~~~~p~~IvF~~~g~I~l~--~------------------------ 54 (202)
.||||||+| |+||+|+| ||+|+++ ++||||+|+ |+|.+. .
T Consensus 21 ttGG~gG~v--~~VTtl~d---------Lr~al~~-~~PriIvv~--G~I~~~~~~~l~v~snkTI~G~ga~~I~G~Gi~ 86 (340)
T 3zsc_A 21 TVGGLGGEI--VFVRTAEE---------LEKYTTA-EGKYVIVVD--GTIVFEPKREIKVLSDKTIVGINDAKIVGGGLV 86 (340)
T ss_dssp CCTTTTSEE--EEECSHHH---------HHHHHTS-SSCEEEEEE--EEEEEEEEEEEEECSSEEEEEEEEEEEEEEEEE
T ss_pred CccCCCceE--EEeCCHHH---------HHHHHhC-CCCEEEEEC--cEEEeCCcceEEecCCCEEEeccCcEEecCceE
Confidence 489999999 99999998 9999999 999999975 555443 1
Q ss_pred -----------c---C-----CC-----CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeee
Q 041616 55 -----------L---R-----KI-----DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKL 110 (202)
Q Consensus 55 -----------I---~-----~~-----~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~l 110 (202)
| . .+ ++|+|+|++++|||||||+|+|+.||++|++.++++||||||+|++|+|+||
T Consensus 87 I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~L 166 (340)
T 3zsc_A 87 IKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSL 166 (340)
T ss_dssp EESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCE
T ss_pred EEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeE
Confidence 0 1 13 8999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcc--CC-CceeEEEEceEecCCCCCCCCcccCCeEEEECceEEC----------ccceEEcccc--cccccCcc
Q 041616 111 LGHDDGYI--RD-KNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRK----------WTQYTIGKAN--LKYTEEQK 175 (202)
Q Consensus 111 iG~~d~~~--~d-~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n----------~~~yaig~~~--~~y~~~~~ 175 (202)
+|++|+.. .| ++++|||||||| +++.+|+||+|+|++|+|||||++ |..||+++++ .+++|+|+
T Consensus 167 iG~sd~~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~a~i~~E~N~ 245 (340)
T 3zsc_A 167 VGSSDKEDPEQAGQAYKVTYHHNYF-KNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNY 245 (340)
T ss_dssp ECCCTTSCHHHHHHSCEEEEESCEE-ESCCBCTTEEESSEEEEESCEEECCCCCSCSSCCSCCEEEEEETTCEEEEESCE
T ss_pred eCcCCCCccccccCCcEEEEECeEe-cCCCCCCCcccCCeEEEEccEEECCccccccccceeeeeEecCCCCEEEEECcE
Confidence 99998752 33 468999999999 899999999999999999999999 9999999766 77999999
Q ss_pred eEecCC
Q 041616 176 CQVANA 181 (202)
Q Consensus 176 f~~~~~ 181 (202)
|...+.
T Consensus 246 F~~~~~ 251 (340)
T 3zsc_A 246 FMGYGA 251 (340)
T ss_dssp EECSCH
T ss_pred EECCCc
Confidence 987655
No 3
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=7.9e-48 Score=342.28 Aligned_cols=163 Identities=26% Similarity=0.337 Sum_probs=146.5
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhh-------hCCCceEEEEeeCeEEEee--------------------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAI-------LIPQKVWTTYRKHMNITLH-------------------- 53 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~-------~~~~p~~IvF~~~g~I~l~-------------------- 53 (202)
.||||||+| |+||+|+| ||+|++ + ++||+|+ ++|+|.|.
T Consensus 14 TtGG~gG~v--v~Vttl~d---------L~~Al~~~~~~~~~-~~p~iI~--V~G~I~l~~~~~~~i~v~~~~~~~~~~s 79 (326)
T 3vmv_A 14 TTGGAGGRV--EYASTGAQ---------IQQLIDNRSRSNNP-DEPLTIY--VNGTITQGNSPQSLIDVKNHRGKAHEIK 79 (326)
T ss_dssp CCTTTTSEE--EEESSHHH---------HHHHHHHHHHSSCT-TSCEEEE--ECSEEESTTCSSSSEEESCTTCTTSCEE
T ss_pred CccCCCCeE--EEECCHHH---------HHHHHhhcccccCC-CCCEEEE--EeeEEecCCCCCceEEEecccccccCCC
Confidence 489999999 99999998 999999 6 8999998 88888764
Q ss_pred e--c--------------------------------CCCCCCeEEeec-CCeEEEecceeccC---------CcceEEee
Q 041616 54 K--L--------------------------------RKIDRDAIRLVI-ALKVWIDHNTLYKC---------QNGLIDVT 89 (202)
Q Consensus 54 ~--I--------------------------------~~~~~Dai~i~~-~~nVwIDHctfs~~---------~Dg~id~~ 89 (202)
+ | ..+++|+|+|++ ++|||||||+|+|+ .||++|++
T Consensus 80 n~TI~G~g~~~~i~G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~ 159 (326)
T 3vmv_A 80 NISIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMK 159 (326)
T ss_dssp EEEEEECTTCCEEESCCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEEC
T ss_pred CeEEEecCCCeEEeCcEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEec
Confidence 1 1 357899999997 89999999999975 49999999
Q ss_pred eCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcccCCeEEEECceEECccceEEcccc--
Q 041616 90 RGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWTQYTIGKAN-- 167 (202)
Q Consensus 90 ~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~~yaig~~~-- 167 (202)
.++++||||||+|++|+|++|+|++|+... ...+|||||||| +++.+|+||+|+|++|+|||||++|..|++++++
T Consensus 160 ~~s~~VTISnn~f~~h~k~~LiG~sd~~~~-~~~~vT~~~N~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a 237 (326)
T 3vmv_A 160 RNAEYITVSWNKFENHWKTMLVGHTDNASL-APDKITYHHNYF-NNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGA 237 (326)
T ss_dssp TTCEEEEEESCEEEEEEECEEECSSSCGGG-CCEEEEEESCEE-EEEEECTTEEESCEEEEESCEEEEESSCSEEEETTC
T ss_pred CCCceEEEEceEEecCceEEEECCCCCCcc-cCccEEEEeeEe-cCCcCcCCcccCCcEEEEccEEECCCceEEeecCCc
Confidence 999999999999999999999999987543 236899999999 9999999999999999999999999999888655
Q ss_pred cccccCcceEec
Q 041616 168 LKYTEEQKCQVA 179 (202)
Q Consensus 168 ~~y~~~~~f~~~ 179 (202)
.+++|+|+|...
T Consensus 238 ~v~~e~N~F~~~ 249 (326)
T 3vmv_A 238 RVFVENNYFDNV 249 (326)
T ss_dssp EEEEESCEEEEE
T ss_pred EEEEEceEEECC
Confidence 779999999887
No 4
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=1.2e-47 Score=341.57 Aligned_cols=170 Identities=24% Similarity=0.342 Sum_probs=146.4
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhhh--CCCceEEEEee-----------------CeEEEee--------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAIL--IPQKVWTTYRK-----------------HMNITLH-------- 53 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~--~~~p~~IvF~~-----------------~g~I~l~-------- 53 (202)
.|||+||+| |+||+|+ +||+|+++ .++||||+|+. ...|+|+
T Consensus 9 ttGG~gg~~--~~Vtt~~---------~L~~al~~~~~~~p~iI~~~G~i~~~~~~~~c~~~~~~~~~~~l~v~sn~TI~ 77 (330)
T 2qy1_A 9 TTGGGNKVP--VNVATFE---------AMQSAIDSYSGSGGLVLNYTGKFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIK 77 (330)
T ss_dssp CCTTTTSCC--EEECSHH---------HHHHHHHHSCSSSCEEEEECCBCCGGGCCCGGGSTTSCCCEEEEESCCSEEEE
T ss_pred CCCCCCceE--EEcCCHH---------HHHHHHhccCCCCCEEEEEccEEecccccccccccccccceeEEEcCCCeEEE
Confidence 589999999 9999987 59999985 37899999951 0112222
Q ss_pred ------------------e-----c------CCCCCCeEEee-----cCCeEEEecceeccCC-----------cceEEe
Q 041616 54 ------------------K-----L------RKIDRDAIRLV-----IALKVWIDHNTLYKCQ-----------NGLIDV 88 (202)
Q Consensus 54 ------------------~-----I------~~~~~Dai~i~-----~~~nVwIDHctfs~~~-----------Dg~id~ 88 (202)
| | ..+++|+|+|+ .++|||||||+|+|+. ||++|+
T Consensus 78 G~~a~i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi 157 (330)
T 2qy1_A 78 GANGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDM 157 (330)
T ss_dssp ECTTCBBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEE
T ss_pred CCCcEEeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeeccccc
Confidence 1 1 12479999999 4999999999999876 999999
Q ss_pred eeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcccCCeEEEECceEECccceEEcccc-
Q 041616 89 TRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWTQYTIGKAN- 167 (202)
Q Consensus 89 ~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~~yaig~~~- 167 (202)
+.++++||||||+|++|+|++|+|++|+...++.++|||||||| +++.+|+||+|+|++|+|||||++|..|++++++
T Consensus 158 ~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f-~~~~~R~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~ 236 (330)
T 2qy1_A 158 KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF-ENVESRVPLQRFGLSHIYNNYFNNVTTSGINVRMG 236 (330)
T ss_dssp ESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE-EEEEECTTEEESSEEEEESCEEEEECSCSEEEETT
T ss_pred ccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE-cCCCCCCCceecceEEEEeeEEEcccceEeccCCC
Confidence 99999999999999999999999999987766678999999999 8999999999999999999999999999998755
Q ss_pred -cccccCcceEecCCc
Q 041616 168 -LKYTEEQKCQVANAK 182 (202)
Q Consensus 168 -~~y~~~~~f~~~~~s 182 (202)
.+++|+|+|...+.+
T Consensus 237 ~~i~~e~N~F~~~~~p 252 (330)
T 2qy1_A 237 GIAKIESNYFENIKNP 252 (330)
T ss_dssp CEEEEESCEEEEEESS
T ss_pred cEEEEEccEEECCCCc
Confidence 779999999876554
No 5
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=8.1e-45 Score=326.21 Aligned_cols=166 Identities=27% Similarity=0.413 Sum_probs=142.9
Q ss_pred CCCCCCCc-EEEEEEcCCCCCCCCCCCCchhhhh--hhCCCceEEEEeeCeEEEee---------------e--------
Q 041616 1 MTNNVGKD-VVRYKVTDPGDDTINPKPGTLRYEA--ILIPQKVWTTYRKHMNITLH---------------K-------- 54 (202)
Q Consensus 1 ~tGGrgG~-v~~y~VT~l~D~~~~p~~GsLR~av--~~~~~p~~IvF~~~g~I~l~---------------~-------- 54 (202)
.|||+||+ | |+||+|+| ||+|+ .. ++||+ |.++|+|.+. .
T Consensus 18 tTGG~~g~~v--~~Vtt~~~---------L~~al~~~~-~~p~V--I~V~GtI~~~~~~~~~s~~~~~~~~~l~v~sn~T 83 (355)
T 1pcl_A 18 TTGGAKAAKA--VEVKNISD---------FKKALNGTD-SSAKI--IKVTGPIDISGGKAYTSFDDQKARSQISIPSNTT 83 (355)
T ss_pred CccCCCCceE--EEeCCHHH---------HHHHHhhCC-CCcEE--EEECCEEecCCccccccccccccceeEEeCCCeE
Confidence 48999997 8 99999998 99999 55 88885 5577777542 0
Q ss_pred ---------------------------c--C-C--------------CCCCeEEeecCCeEEEecceeccC---------
Q 041616 55 ---------------------------L--R-K--------------IDRDAIRLVIALKVWIDHNTLYKC--------- 81 (202)
Q Consensus 55 ---------------------------I--~-~--------------~~~Dai~i~~~~nVwIDHctfs~~--------- 81 (202)
| . . .++|+|+|++++|||||||+|+|+
T Consensus 84 I~G~G~~~~i~g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~ 163 (355)
T 1pcl_A 84 IIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTT 163 (355)
T ss_pred EEEecCCeEEecCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCcccccc
Confidence 1 1 0 358999999999999999999997
Q ss_pred --------CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCcc-CC-CceeEEEEceEecCCCCCCCCcccCCeEEEE
Q 041616 82 --------QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYI-RD-KNMKMTIAYNHFGRNCNQRMPRVRHGFAHVI 151 (202)
Q Consensus 82 --------~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~-~d-~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~ 151 (202)
.||++|++.++++||||||+|++|+|++|+|++|+.. +| ++++|||||||| +++.+|+||+|+|.+|+|
T Consensus 164 ~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f-~~~~~R~PrvR~G~~Hv~ 242 (355)
T 1pcl_A 164 KDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVF-DRVTERAPRVRFGSIHAY 242 (355)
T ss_pred ccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEE-eCCcccCCceecceEEEE
Confidence 6999999999999999999999999999999999865 55 578999999999 999999999999999999
Q ss_pred CceEEC---cc----ceEEcccc--cccccCcceEecCC
Q 041616 152 NNLYRK---WT----QYTIGKAN--LKYTEEQKCQVANA 181 (202)
Q Consensus 152 NN~~~n---~~----~yaig~~~--~~y~~~~~f~~~~~ 181 (202)
||||++ |+ .|++++++ .+++|+|+|...+.
T Consensus 243 NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~~ 281 (355)
T 1pcl_A 243 NNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNL 281 (355)
T ss_pred cceEEcccCCCccccceEecCCCCcEEEEEccEEECCCc
Confidence 999975 44 69998654 78999999987644
No 6
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=1.2e-44 Score=325.80 Aligned_cols=167 Identities=29% Similarity=0.460 Sum_probs=142.7
Q ss_pred CCCCCCC---cEEEEEEcCCCCCCCCCCCCchhhhh-hhCCCceEEEEeeCeEEEee-----------------------
Q 041616 1 MTNNVGK---DVVRYKVTDPGDDTINPKPGTLRYEA-ILIPQKVWTTYRKHMNITLH----------------------- 53 (202)
Q Consensus 1 ~tGGrgG---~v~~y~VT~l~D~~~~p~~GsLR~av-~~~~~p~~IvF~~~g~I~l~----------------------- 53 (202)
.|||+|| +| |+||+|+| ||+|+ .+ ++||+|+ ++|+|.+.
T Consensus 24 tTGG~~g~~~~v--~~Vtt~~d---------L~~al~~~-~~p~vI~--V~GtI~~~~~~~~~s~~~~~~~~~l~v~snk 89 (361)
T 1pe9_A 24 TTGGAAATSDNI--YIVTNISE---------FTSALSAG-AEAKIIQ--IKGTIDISGGTPYTDFADQKARSQINIPANT 89 (361)
T ss_dssp CCTTTTCCGGGE--EEECSHHH---------HHHHHTTT-TSCEEEE--ECSEEETTTTCCCCSHHHHHHHSEEECCSSE
T ss_pred CcCCCCCccccE--EEeCCHHH---------HHHHHhcC-CCcEEEE--ECCEEecCCccccccccccccceeEEecCCc
Confidence 4899998 89 99999988 99999 77 8899774 55555431
Q ss_pred ------------------------------ec--C-C--------------CCCCeEEeec-CCeEEEecceeccC----
Q 041616 54 ------------------------------KL--R-K--------------IDRDAIRLVI-ALKVWIDHNTLYKC---- 81 (202)
Q Consensus 54 ------------------------------~I--~-~--------------~~~Dai~i~~-~~nVwIDHctfs~~---- 81 (202)
|| . . .++|+|+|++ ++|||||||+|+|+
T Consensus 90 TI~G~G~~~~i~g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~ 169 (361)
T 1pe9_A 90 TVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTD 169 (361)
T ss_dssp EEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCG
T ss_pred EEEccCCCeEEecCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccc
Confidence 11 1 0 3589999999 99999999999997
Q ss_pred -------------CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCcc-CC-CceeEEEEceEecCCCCCCCCcccCC
Q 041616 82 -------------QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYI-RD-KNMKMTIAYNHFGRNCNQRMPRVRHG 146 (202)
Q Consensus 82 -------------~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~-~d-~~~~vT~hhN~f~~~~~~R~Pr~r~G 146 (202)
.||++|+++++++||||||+|++|+|+||+|++|+.. .| ++++|||||||| +++.+|+||+|+|
T Consensus 170 ~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~R~G 248 (361)
T 1pe9_A 170 DMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVF-NRVTERAPRVRYG 248 (361)
T ss_dssp GGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEE-EEEEECSSEESSC
T ss_pred cccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEE-cCccccCcccccc
Confidence 6999999999999999999999999999999998865 44 579999999999 9999999999999
Q ss_pred eEEEECceEEC---cc----ceEEcccc--cccccCcceEecCCc
Q 041616 147 FAHVINNLYRK---WT----QYTIGKAN--LKYTEEQKCQVANAK 182 (202)
Q Consensus 147 ~~hv~NN~~~n---~~----~yaig~~~--~~y~~~~~f~~~~~s 182 (202)
++|+|||||++ |+ .|++++++ .+++|+|+|...+.+
T Consensus 249 ~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~ 293 (361)
T 1pe9_A 249 SIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLS 293 (361)
T ss_dssp EEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCC
T ss_pred eEEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCCc
Confidence 99999999975 44 68888654 789999999987433
No 7
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=2.6e-44 Score=328.55 Aligned_cols=125 Identities=33% Similarity=0.546 Sum_probs=112.7
Q ss_pred CCCeEEeecCCeEEEecceeccC-----------------CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCC-
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKC-----------------QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRD- 120 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~-----------------~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d- 120 (202)
++|+|+|++++|||||||+|+|+ .||++|++.++++||||||+|.+|+|++|+|++|+...|
T Consensus 188 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 267 (416)
T 1vbl_A 188 EYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADS 267 (416)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGT
T ss_pred CCceEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccC
Confidence 67999999999999999999997 599999999999999999999999999999999987665
Q ss_pred CceeEEEEceEecCCCCCCCCcccCCeEEEECceEECcc------ceEEcccc--cccccCcceEecCCcch
Q 041616 121 KNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWT------QYTIGKAN--LKYTEEQKCQVANAKSM 184 (202)
Q Consensus 121 ~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~------~yaig~~~--~~y~~~~~f~~~~~s~v 184 (202)
++++|||||||| +++.+|+||+|+|++|+|||||+++. .|++++++ .+++|+|+|...+.+..
T Consensus 268 g~~~VT~hhN~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~ 338 (416)
T 1vbl_A 268 GHLRVTLHHNYY-KNVTQRLPRVRFGQVHIYNNYYEFSNLADYDFQYAWGVGVFSQIYAQNNYFSFDWDIDP 338 (416)
T ss_dssp TCCCEEEESCEE-EEEEECSSEESSCEEEEESCEEEECTTSSSCCCCSEEEETTCEEEEESCEEEESSCCCG
T ss_pred CceEEEEECcEe-cCCccCCcccccceEEEEcceEECCCCCcccceeEeccCCCcEEEEECCEEECCCCCCc
Confidence 469999999999 89999999999999999999999753 38888644 78999999998865433
No 8
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=7.4e-44 Score=324.17 Aligned_cols=120 Identities=32% Similarity=0.553 Sum_probs=110.2
Q ss_pred CCCeEEeecCCeEEEecceeccC-----------------CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCC-
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKC-----------------QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRD- 120 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~-----------------~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d- 120 (202)
++|+|+|++++|||||||+|+|+ .||++|++.++++||||||+|++|+|++|+|++|+...|
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDD 261 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGT
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCcccc
Confidence 67999999999999999999997 599999999999999999999999999999999987765
Q ss_pred CceeEEEEceEecCCCCCCCCcccCCeEEEECceEECcc-------ceEEcccc--cccccCcceEec
Q 041616 121 KNMKMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWT-------QYTIGKAN--LKYTEEQKCQVA 179 (202)
Q Consensus 121 ~~~~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~-------~yaig~~~--~~y~~~~~f~~~ 179 (202)
++++|||||||| +++.+|+||+|+|++|+|||||++|. .|++++++ .+++|+|+|...
T Consensus 262 g~~~vT~h~N~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 328 (399)
T 2o04_A 262 GKLKITLHHNRY-KNIVQAAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVP 328 (399)
T ss_dssp TCCCEEEESCEE-EEEEECTTEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEESCEEECT
T ss_pred CceeEEEECcEe-cCCcccCCCcccceEEEEcceEECCCCCCccceeeEeccCCCcEEEEEceEEECC
Confidence 468999999999 99999999999999999999999874 38887644 789999999875
No 9
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=2.8e-41 Score=303.64 Aligned_cols=161 Identities=19% Similarity=0.150 Sum_probs=140.6
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhhhCCCceEEEEeeCeEEEe----------------------------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAILIPQKVWTTYRKHMNITL---------------------------- 52 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~~~~p~~IvF~~~g~I~l---------------------------- 52 (202)
+|||++|++ |+||+++| ||+|+++ ++||+|+| +|+|.+
T Consensus 14 tTGG~~g~~--~~Vtt~~d---------L~~al~~-~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~~~~~~~~~~~ 79 (359)
T 1idk_A 14 VTGGGSATP--VYPDTIDE---------LVSYLGD-DEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQD 79 (359)
T ss_dssp CCTTTTCCC--BCCCSHHH---------HHHHHHS-SSCEEEEE--CSEEECTTTTCEEEEEEECTTCSSTTBCEEECGG
T ss_pred CCCCCCceE--EecCCHHH---------HHHHHcC-CCceEEEE--CCEEEeccccCccccccccccccccccccccccc
Confidence 589999999 99999987 9999999 99999998 566663
Q ss_pred -------------------------e----------------------------e-----c--------CCCCCCeEEee
Q 041616 53 -------------------------H----------------------------K-----L--------RKIDRDAIRLV 66 (202)
Q Consensus 53 -------------------------~----------------------------~-----I--------~~~~~Dai~i~ 66 (202)
+ | | ..+++|+|+|+
T Consensus 80 ~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~ 159 (359)
T 1idk_A 80 DWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD 159 (359)
T ss_dssp GHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC
T ss_pred cccccccccCccccccccccccceEEeCCCceEEEecCCeEEecceEEEecCCCcEEEeCeEEEcccccccccCCceeec
Confidence 1 0 0 13788999999
Q ss_pred cCCeEEEecceeccCCcceEEe-eeCCccEEEecceeec------------CCeeeeeCCCCCccCCCceeEEEEceEec
Q 041616 67 IALKVWIDHNTLYKCQNGLIDV-TRGSTDVTISNNWFRN------------QDKIKLLGHDDGYIRDKNMKMTIAYNHFG 133 (202)
Q Consensus 67 ~~~nVwIDHctfs~~~Dg~id~-~~~s~~VTiS~n~f~~------------h~k~~liG~~d~~~~d~~~~vT~hhN~f~ 133 (202)
+++|||||||+|+|+.|++++. ++++++||||||+|.+ ||+++|+|++| ++|||||||
T Consensus 160 ~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd--------~vT~hhN~f- 230 (359)
T 1idk_A 160 DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDAD--------LVTMKGNYI- 230 (359)
T ss_dssp SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSC--------EEEEESCEE-
T ss_pred CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCC--------CeEEEceEe-
Confidence 9999999999999999999986 6789999999999974 35899999865 699999999
Q ss_pred CCCCCCCCcccCC-eEEEECceEECccceEEcccc--cccccCcceEecCCcch
Q 041616 134 RNCNQRMPRVRHG-FAHVINNLYRKWTQYTIGKAN--LKYTEEQKCQVANAKSM 184 (202)
Q Consensus 134 ~~~~~R~Pr~r~G-~~hv~NN~~~n~~~yaig~~~--~~y~~~~~f~~~~~s~v 184 (202)
+++.+|+||+|+| .+|++||||++|..|+++++. .+++|+|+|...+.++.
T Consensus 231 ~~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 231 YHTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp ESBCSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEE
T ss_pred ecCcccCccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCcee
Confidence 8999999999998 599999999999999999765 77889999987665543
No 10
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=5.2e-41 Score=301.86 Aligned_cols=119 Identities=28% Similarity=0.297 Sum_probs=106.6
Q ss_pred CCCCCeEEeecCCeEEEecceeccCCcceE-EeeeCCccEEEecceeec-----------C-CeeeeeCCCCCccCCCce
Q 041616 57 KIDRDAIRLVIALKVWIDHNTLYKCQNGLI-DVTRGSTDVTISNNWFRN-----------Q-DKIKLLGHDDGYIRDKNM 123 (202)
Q Consensus 57 ~~~~Dai~i~~~~nVwIDHctfs~~~Dg~i-d~~~~s~~VTiS~n~f~~-----------h-~k~~liG~~d~~~~d~~~ 123 (202)
.+++|+|+|++++|||||||+|+|+.||++ +.++++++||||||+|.+ | +++||+|++|
T Consensus 150 ~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd-------- 221 (359)
T 1qcx_A 150 VWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSND-------- 221 (359)
T ss_dssp ETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSE--------
T ss_pred cccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCC--------
Confidence 468899999999999999999999999998 457789999999999983 4 6889999865
Q ss_pred eEEEEceEecCCCCCCCCcccCC-eEEEECceEECccceEEcccc--cccccCcceEecCCcch
Q 041616 124 KMTIAYNHFGRNCNQRMPRVRHG-FAHVINNLYRKWTQYTIGKAN--LKYTEEQKCQVANAKSM 184 (202)
Q Consensus 124 ~vT~hhN~f~~~~~~R~Pr~r~G-~~hv~NN~~~n~~~yaig~~~--~~y~~~~~f~~~~~s~v 184 (202)
++||||||| +++.+|+||+|++ .+|++||||++|..|++++++ .+++|+|+|...+.++.
T Consensus 222 ~vT~~~N~f-~~~~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 222 MVTLKGNYF-YNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp EEEEESCEE-ESBCSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEEC
T ss_pred CeehcccEe-ccCcccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCcccC
Confidence 699999999 8999999999986 699999999999999999765 77999999998876654
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=4.8e-41 Score=301.53 Aligned_cols=123 Identities=28% Similarity=0.404 Sum_probs=111.3
Q ss_pred CCCCCeEEeecCCeEEEecceeccC-------------CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCce
Q 041616 57 KIDRDAIRLVIALKVWIDHNTLYKC-------------QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNM 123 (202)
Q Consensus 57 ~~~~Dai~i~~~~nVwIDHctfs~~-------------~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~ 123 (202)
.+++|+|+|++++|||||||+|+|. .||++|+++++++||||||+|++|+|++|+|++|++. .+
T Consensus 127 ~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~---g~ 203 (353)
T 1air_A 127 AKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDT---GR 203 (353)
T ss_dssp GGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCC---CC
T ss_pred CCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCC---Cc
Confidence 3578999999999999999999986 3999999999999999999999999999999998643 37
Q ss_pred eEEEEceEecCCCCCCCCcccCCeEEEECceEECccceEEcccc--cccccCcceEecCCcc
Q 041616 124 KMTIAYNHFGRNCNQRMPRVRHGFAHVINNLYRKWTQYTIGKAN--LKYTEEQKCQVANAKS 183 (202)
Q Consensus 124 ~vT~hhN~f~~~~~~R~Pr~r~G~~hv~NN~~~n~~~yaig~~~--~~y~~~~~f~~~~~s~ 183 (202)
+|||||||| +++.+|+||+|+|++|+|||||++|..|++++++ .+++|+|+|...+.+.
T Consensus 204 ~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~~p~ 264 (353)
T 1air_A 204 NITYHHNYY-NDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINPV 264 (353)
T ss_dssp EEEEESCEE-EEEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEESSE
T ss_pred eEEEEceEE-cCCcCCCCCCcCceEEEEccEEECCCCceeccCCCcEEEEEceEEECCCCce
Confidence 999999999 9999999999999999999999999999988764 7799999998765443
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.02 E-value=3e-05 Score=73.63 Aligned_cols=118 Identities=9% Similarity=0.088 Sum_probs=81.8
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCCCe-----------EEeec------CCeEEEecceeccCCcceEEeeeCCccEEE
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDRDA-----------IRLVI------ALKVWIDHNTLYKCQNGLIDVTRGSTDVTI 97 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~Da-----------i~i~~------~~nVwIDHctfs~~~Dg~id~~~~s~~VTi 97 (202)
.+|+.|.|...-.+.+++| ..++.|+ +.+++ ++||||++|.+....|..|.++ .+.+|+|
T Consensus 132 ~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIk-sseNI~I 210 (609)
T 3gq8_A 132 SRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTH-HSQYINI 210 (609)
T ss_dssp TTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEEC-SCEEEEE
T ss_pred CCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEec-CCeeEEE
Confidence 3578888877766666665 3344444 44444 7899999999988888888884 5999999
Q ss_pred ecceeecCC-----eeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc----CC---eEEEECceEE-CccceEEc
Q 041616 98 SNNWFRNQD-----KIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR----HG---FAHVINNLYR-KWTQYTIG 164 (202)
Q Consensus 98 S~n~f~~h~-----k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r----~G---~~hv~NN~~~-n~~~yaig 164 (202)
++|.+.+.. -++-||. +..+|++.+|.| .++ .|.-|++ .+ .+++.||+.+ |+..|.+.
T Consensus 211 ~Nc~~~gp~G~S~~~GIsIGs-------gs~NVtV~Nc~i-~nt-~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r 281 (609)
T 3gq8_A 211 LNCYSHDPRLTANCNGFEIDD-------GSRHVVLSNNRS-KGC-YGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFR 281 (609)
T ss_dssp ESCEEECCSSCSSCCSEEECT-------TCEEEEEESEEE-ESS-SEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEE
T ss_pred EeEEEECCCCCCCcccEEccC-------CcccEEEEeeEE-ECC-CCEEEEEecCCCCccccEEEECCEeecCceEecce
Confidence 999996532 3444442 236899999999 554 4555554 11 6899998766 45555544
No 13
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.93 E-value=5.7e-05 Score=73.27 Aligned_cols=118 Identities=9% Similarity=0.078 Sum_probs=82.1
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCC-----------CeEEeec------CCeEEEecceeccCCcceEEeeeCCccEEE
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDR-----------DAIRLVI------ALKVWIDHNTLYKCQNGLIDVTRGSTDVTI 97 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~-----------Dai~i~~------~~nVwIDHctfs~~~Dg~id~~~~s~~VTi 97 (202)
..|+.|.|...-.|.+++| ..++. |++.+++ ++||||++|.++...|..|.++ .+.+|+|
T Consensus 132 ~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIk-sSeNI~I 210 (772)
T 3gqn_A 132 SRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTH-HSQYINI 210 (772)
T ss_dssp TTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEEC-SCEEEEE
T ss_pred CCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEec-CCceEEE
Confidence 3577888877766666664 33333 4444455 8999999999988888888884 5999999
Q ss_pred ecceeecCC-----eeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc----CC---eEEEECceEE-CccceEEc
Q 041616 98 SNNWFRNQD-----KIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR----HG---FAHVINNLYR-KWTQYTIG 164 (202)
Q Consensus 98 S~n~f~~h~-----k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r----~G---~~hv~NN~~~-n~~~yaig 164 (202)
++|.+.++. .++-||. +..+|++.+|.| .++ .|.=|++ .+ .+|+.||+.+ ++..|.+.
T Consensus 211 ~Nc~c~gphG~S~~~GIsIGs-------gs~NVtV~Nc~~-~nT-~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir 281 (772)
T 3gqn_A 211 LNCYSHDPRLTANCNGFEIDD-------GSRHVVLSNNRS-KGC-YGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFR 281 (772)
T ss_dssp ESCEEECCSSSSSCCSEEECT-------TCEEEEEEEEEE-ESS-SEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEEC
T ss_pred EeEEEECCCCCCCcccEEecC-------CcccEEEEceEE-ECC-CcEEEEEEeCCCCccccEEEECCEEeccCeEecce
Confidence 999996542 3444442 226899999999 554 4444444 11 6899998887 45556655
No 14
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.68 E-value=0.00022 Score=67.59 Aligned_cols=115 Identities=19% Similarity=0.162 Sum_probs=79.0
Q ss_pred CceEEEEeeCeEEEeeec----------------------------CCCCCCeEEeecCCeEEEecceeccCCcceEEee
Q 041616 38 QKVWTTYRKHMNITLHKL----------------------------RKIDRDAIRLVIALKVWIDHNTLYKCQNGLIDVT 89 (202)
Q Consensus 38 ~p~~IvF~~~g~I~l~~I----------------------------~~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~ 89 (202)
.|+.|.|..+-.|.+.+| .....|+|.+.+++||+|++|.|.. .|..+.++
T Consensus 330 rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~-gDD~Iaik 408 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDT-GDDCINFA 408 (608)
T ss_dssp SCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEEC-SSCSEEEE
T ss_pred CCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEec-CCceEEec
Confidence 688888876666655542 1235899999999999999999986 47777776
Q ss_pred eC----------CccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc-----CC---eEEEE
Q 041616 90 RG----------STDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR-----HG---FAHVI 151 (202)
Q Consensus 90 ~~----------s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r-----~G---~~hv~ 151 (202)
.+ +.+|+|++|.|....-...||+... ..-.+|++.+|.| .++ .+.=|++ .| .+.+-
T Consensus 409 sg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~---~~v~nI~v~n~~~-~~t-~~GirIKt~~g~gG~v~nI~~~ 483 (608)
T 2uvf_A 409 AGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTG---AWIEDILAENNVM-YLT-DIGLRAKSTSTIGGGARNVTFR 483 (608)
T ss_dssp CCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCT---TCEEEEEEESCEE-ESC-SEEEEEEEETTTCCEEEEEEEE
T ss_pred CCcCccccccccccCEEEEeEEEeCCCCeEEEcccCC---CCEEEEEEEeEEE-ECC-CceEEEeeecCCCceEECcEEE
Confidence 44 6899999999987444445787322 2346899999999 565 3333332 23 34555
Q ss_pred CceEECc
Q 041616 152 NNLYRKW 158 (202)
Q Consensus 152 NN~~~n~ 158 (202)
|+...+.
T Consensus 484 ni~m~~v 490 (608)
T 2uvf_A 484 NNAMRDL 490 (608)
T ss_dssp EEEEEEE
T ss_pred eeEEEcc
Confidence 6555554
No 15
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.54 E-value=0.00026 Score=63.01 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=79.5
Q ss_pred CCceEEEEeeCeEEEeeec-----------------------------CCCCCCeEEeecCCeEEEecceeccCCcceEE
Q 041616 37 PQKVWTTYRKHMNITLHKL-----------------------------RKIDRDAIRLVIALKVWIDHNTLYKCQNGLID 87 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I-----------------------------~~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id 87 (202)
..|+.|.|..+-.+.+.+| .....|+|.+.+++||+|.+|.|..+ |..+.
T Consensus 149 ~rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-DDcIa 227 (376)
T 1bhe_A 149 NTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-DDNVA 227 (376)
T ss_dssp CCCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-SCSEE
T ss_pred CCCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-CCeEE
Confidence 3688888876666655532 12358999999999999999999855 66788
Q ss_pred eee-----CCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc-----CC---eEEEECce
Q 041616 88 VTR-----GSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR-----HG---FAHVINNL 154 (202)
Q Consensus 88 ~~~-----~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r-----~G---~~hv~NN~ 154 (202)
++. ++.+|+|++|.|.. ..++-||+... .-.+|++.+|.| .++ .|.-|++ .| .+++-|..
T Consensus 228 iks~~~~~~s~nI~I~n~~~~~-ghGisiGSe~~----~v~nV~v~n~~~-~~t-~~GirIKt~~g~~G~v~ni~f~ni~ 300 (376)
T 1bhe_A 228 IKAYKGRAETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKM-NGT-TNGLRIKSDKSAAGVVNGVRYSNVV 300 (376)
T ss_dssp EEECTTSCCEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEE-ESC-SEEEEEECCTTTCCEEEEEEEEEEE
T ss_pred EcccCCCCCceEEEEEeeEEEc-cccEEeccCCc----cEeeEEEEeeEE-eCC-CcEEEEEEecCCCceEeeEEEEeEE
Confidence 873 78999999999985 23466776322 346899999999 665 3444443 23 24555555
Q ss_pred EECc
Q 041616 155 YRKW 158 (202)
Q Consensus 155 ~~n~ 158 (202)
..+.
T Consensus 301 ~~~v 304 (376)
T 1bhe_A 301 MKNV 304 (376)
T ss_dssp EESC
T ss_pred EeCC
Confidence 5554
No 16
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.51 E-value=0.00035 Score=64.06 Aligned_cols=101 Identities=12% Similarity=0.165 Sum_probs=74.8
Q ss_pred CCceEEEEeeCeEEEeeec---------------------------CCCCCCeEEeecCCeEEEecceeccCCcceEEee
Q 041616 37 PQKVWTTYRKHMNITLHKL---------------------------RKIDRDAIRLVIALKVWIDHNTLYKCQNGLIDVT 89 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I---------------------------~~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~ 89 (202)
..|+.|.|..+-.+.+.+| .....|+|.+.+++||+|++|.|.. .|..+.++
T Consensus 188 ~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaik 266 (448)
T 3jur_A 188 LRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIK 266 (448)
T ss_dssp CCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-SSEEEEEB
T ss_pred CCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-CCCcEEec
Confidence 4688899987777766642 2346899999999999999999986 67788887
Q ss_pred eC-----------CccEEEecceee--cCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcc
Q 041616 90 RG-----------STDVTISNNWFR--NQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRV 143 (202)
Q Consensus 90 ~~-----------s~~VTiS~n~f~--~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~ 143 (202)
.+ +.+|+|++|.+. .-.-+.-||+.-. .+-.+|++.++.| .++ .|.-|+
T Consensus 267 sg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~---~~v~nV~v~n~~~-~~t-~~GirI 328 (448)
T 3jur_A 267 SGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMS---GGVRNVVARNNVY-MNV-ERALRL 328 (448)
T ss_dssp CCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCT---TCEEEEEEESCEE-ESC-SEEEEE
T ss_pred cCccccccccCCCceeEEEEEeEEecCCCcceEEECCccc---CcEEEEEEEEEEE-ecc-cceEEE
Confidence 66 789999999993 2233677886422 2347899999999 544 344444
No 17
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.44 E-value=0.00059 Score=60.06 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=66.6
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCC
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCN 137 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~ 137 (202)
...|+|.+..++||+|.+|.+..+ |..+.++. ..+|+|++|.|.... ++.||+-..+....-.+|++.++.| .++
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~g-DDciaiks-g~nI~i~n~~~~~gh-GisiGSlg~~~~~~v~nV~v~n~~~-~~~- 226 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQ-DDCLAINS-GTNITFTGGTCSGGH-GLSIGSVGGRSDNTVKTVTISNSKI-VNS- 226 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEESSC-CEEEEEESSSSCCEEEEEEEEEEEE-ESC-
T ss_pred CCCCcEEEcCcceEEEEecEEecC-CCEEEEcC-CccEEEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEE-ECC-
Confidence 348999999999999999999865 55677765 489999999998643 5667762221222346899999999 554
Q ss_pred CCCCccc-----CC---eEEEECceEECccceEE
Q 041616 138 QRMPRVR-----HG---FAHVINNLYRKWTQYTI 163 (202)
Q Consensus 138 ~R~Pr~r-----~G---~~hv~NN~~~n~~~yai 163 (202)
.+.-|++ .| .+.+-|....+...|+|
T Consensus 227 ~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i 260 (339)
T 2iq7_A 227 DNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGI 260 (339)
T ss_dssp SEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEE
T ss_pred CcEEEEEEeCCCCeEEEEEEEEeEEccCcccccE
Confidence 3333443 13 24444555554443443
No 18
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.40 E-value=0.00068 Score=59.73 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=66.0
Q ss_pred CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCC
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQ 138 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~ 138 (202)
..|+|.+..++||+|.+|.++.+ |..+.++. ..+|+|++|.+.... ++-||+-.......-.+|++.++.| .++ .
T Consensus 157 ntDGid~~~s~nV~I~n~~i~~g-DDcIaiks-g~nI~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~-~~t-~ 231 (339)
T 1ia5_A 157 NTDAFDIGTSTYVTISGATVYNQ-DDCVAVNS-GENIYFSGGYCSGGH-GLSIGSVGGRSDNTVKNVTFVDSTI-INS-D 231 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEESSS-CEEEEEECSSSCCEEEEEEEEEEEE-ESC-S
T ss_pred CCCcEEecCCceEEEEeeEEEcC-CCeEEEeC-CeEEEEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEE-ECC-C
Confidence 48999999999999999999854 55678765 489999999998633 5667763221222346899999999 553 3
Q ss_pred CCCccc-----CC---eEEEECceEECccceEE
Q 041616 139 RMPRVR-----HG---FAHVINNLYRKWTQYTI 163 (202)
Q Consensus 139 R~Pr~r-----~G---~~hv~NN~~~n~~~yai 163 (202)
+.-|++ .| .+.+-|....+...|+|
T Consensus 232 ~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i 264 (339)
T 1ia5_A 232 NGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGI 264 (339)
T ss_dssp EEEEEEEETTCCCEEEEEEEEEEEEEEESSEEE
T ss_pred cEEEEEEeCCCCcEEEeeEEEEEEEECcccccE
Confidence 444443 13 24444555554444443
No 19
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.23 E-value=0.0017 Score=58.92 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=64.2
Q ss_pred CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCC
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQ 138 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~ 138 (202)
..|+|.+.. +||+|.+|.+.. .|..+.++.++.+|+|++|.+.... +.-||+-... ..-.+|++.++.| .++ .
T Consensus 175 ntDGidi~~-~nV~I~n~~i~~-gDD~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~--~~v~nV~v~n~~~-~~~-~ 247 (422)
T 1rmg_A 175 GLDGIDVWG-SNIWVHDVEVTN-KDECVTVKSPANNILVESIYCNWSG-GCAMGSLGAD--TDVTDIVYRNVYT-WSS-N 247 (422)
T ss_dssp TCCSEEEEE-EEEEEEEEEEES-SSEEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTT--EEEEEEEEEEEEE-ESS-S
T ss_pred CCccEeecC-CeEEEEeeEEeC-CCCeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCC--CcEEEEEEEeEEE-ecc-c
Confidence 589999999 999999999975 4667888877899999999987643 6666652211 1236799999999 554 3
Q ss_pred CCCccc--CCeEEEECceEECcc
Q 041616 139 RMPRVR--HGFAHVINNLYRKWT 159 (202)
Q Consensus 139 R~Pr~r--~G~~hv~NN~~~n~~ 159 (202)
+.=+++ .|...+-|-.|+|..
T Consensus 248 ~Gi~Ikt~~g~G~v~nI~~~NI~ 270 (422)
T 1rmg_A 248 QMYMIKSNGGSGTVSNVLLENFI 270 (422)
T ss_dssp CSEEEEEBBCCEEEEEEEEEEEE
T ss_pred eEEEEEecCCCcEEEEEEEEeEE
Confidence 333333 233445555555543
No 20
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.80 E-value=0.0064 Score=53.34 Aligned_cols=81 Identities=14% Similarity=0.157 Sum_probs=56.3
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCC
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCN 137 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~ 137 (202)
...|+|.+..++||+|.+|.+..+ |..+.++. ..+|+|++|.+.... ++.||+-..+....-.+|++.++.| .++
T Consensus 151 ~ntDGidi~~s~nV~I~n~~i~~g-DDciaiks-g~nI~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~-~~t- 225 (336)
T 1nhc_A 151 HNTDGFDISESTGVYISGATVKNQ-DDCIAINS-GESISFTGGTCSGGH-GLSIGSVGGRDDNTVKNVTISDSTV-SNS- 225 (336)
T ss_dssp CSCCSEEECSCEEEEEESCEEESS-SEEEEESS-EEEEEEESCEEESSS-EEEEEEESSSSCCEEEEEEEEEEEE-ESC-
T ss_pred CCCCcEEecCCCeEEEEeCEEEcC-CCEEEEeC-CeEEEEEeEEEECCc-CceEccCccccCCCEEEEEEEeeEE-ECC-
Confidence 347899999999999999999765 45677765 489999999998633 5677763221112346899999999 554
Q ss_pred CCCCcc
Q 041616 138 QRMPRV 143 (202)
Q Consensus 138 ~R~Pr~ 143 (202)
.+.-|+
T Consensus 226 ~~girI 231 (336)
T 1nhc_A 226 ANGVRI 231 (336)
T ss_dssp SEEEEE
T ss_pred CcEEEE
Confidence 333344
No 21
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=96.79 E-value=0.0024 Score=56.42 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=54.7
Q ss_pred CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCC
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNC 136 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~ 136 (202)
..|+|.+..++||+|.+|.+.. .|..+.++. ..+|+|++|.|.... ++-||+--......-.+|++.++.| .++
T Consensus 165 NtDGid~~~s~nV~I~n~~i~~-gDDcIaiks-g~nI~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~-~~~ 238 (349)
T 1hg8_A 165 NTDGFDISSSDHVTLDNNHVYN-QDDCVAVTS-GTNIVVSNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQV-VNS 238 (349)
T ss_dssp SCCSEEEESCEEEEEEEEEEEC-SSCSEEESS-EEEEEEEEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEE-EEE
T ss_pred CCCeEEEccccEEEEEeeEEec-CCCeEEeeC-CeEEEEEeEEEeCCc-ceEEccccccccCCEEEEEEEEEEE-ECC
Confidence 4799999999999999999985 566788865 589999999998532 4666653111112346899999999 553
No 22
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=96.77 E-value=0.0089 Score=52.15 Aligned_cols=116 Identities=11% Similarity=0.038 Sum_probs=66.8
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeee---CCCCCccCCCceeEEEEceEecC
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLL---GHDDGYIRDKNMKMTIAYNHFGR 134 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~li---G~~d~~~~d~~~~vT~hhN~f~~ 134 (202)
...|+|.+..++++-|.+|++....+--+++..++++++|++|.+.+...+..+ |+.+. ....++++.+|.+ .
T Consensus 170 ~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~---~~s~nv~i~~N~~-~ 245 (377)
T 2pyg_A 170 NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDL---ALPSNILIDGGAY-Y 245 (377)
T ss_dssp CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCC---CCCEEEEEESCEE-E
T ss_pred CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCC---CCCccEEEECCEE-E
Confidence 566777777777777888854443333455555689999999999875444333 22211 1235678888877 4
Q ss_pred CCCCCCCccc-CCeEEEECceEECccceEEc--ccccccccCcceE
Q 041616 135 NCNQRMPRVR-HGFAHVINNLYRKWTQYTIG--KANLKYTEEQKCQ 177 (202)
Q Consensus 135 ~~~~R~Pr~r-~G~~hv~NN~~~n~~~yaig--~~~~~y~~~~~f~ 177 (202)
+...+...+. ...+.+.||.+++...++|- +...+..++|.|.
T Consensus 246 ~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i~~N~i~ 291 (377)
T 2pyg_A 246 DNAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQILDNQIH 291 (377)
T ss_dssp SCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEE
T ss_pred cCccCceEeccccCeEEECCEEECCCCceEEEecCCCcEEECcEEE
Confidence 4444333332 22567777777765332222 2334444455543
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.66 E-value=0.01 Score=52.02 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=78.5
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCCCeEEeecCCeEEEecceeccC---------CcceEEeeeCCccEEEecceeecC
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDRDAIRLVIALKVWIDHNTLYKC---------QNGLIDVTRGSTDVTISNNWFRNQ 105 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~Dai~i~~~~nVwIDHctfs~~---------~Dg~id~~~~s~~VTiS~n~f~~h 105 (202)
.+|+.|.|...-.+.+.+| ...+.-+|.+. +++|.|+++++... .|| +|+. .+++|+|++|.|...
T Consensus 98 ~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDG-idi~-~s~nV~I~n~~i~~g 174 (336)
T 1nhc_A 98 TKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDG-FDIS-ESTGVYISGATVKNQ 174 (336)
T ss_dssp CCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCS-EEEC-SCEEEEEESCEEESS
T ss_pred CCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCc-EEec-CCCeEEEEeCEEEcC
Confidence 3577787765555555555 66777789999 99999999999863 566 7874 589999999999987
Q ss_pred CeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcc------cCC---eEEEECceEEC
Q 041616 106 DKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRV------RHG---FAHVINNLYRK 157 (202)
Q Consensus 106 ~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~------r~G---~~hv~NN~~~n 157 (202)
+-+.-++++ .+|++.++.+ ....+ =.+ ..+ .+.+.|+.+.+
T Consensus 175 DDciaiksg--------~nI~i~n~~~-~~ghG--isiGS~g~~~~~~v~nV~v~n~~~~~ 224 (336)
T 1nhc_A 175 DDCIAINSG--------ESISFTGGTC-SGGHG--LSIGSVGGRDDNTVKNVTISDSTVSN 224 (336)
T ss_dssp SEEEEESSE--------EEEEEESCEE-ESSSE--EEEEEESSSSCCEEEEEEEEEEEEES
T ss_pred CCEEEEeCC--------eEEEEEeEEE-ECCcC--ceEccCccccCCCEEEEEEEeeEEEC
Confidence 777777653 5799999999 44322 111 012 46788888876
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.47 E-value=0.0067 Score=53.92 Aligned_cols=80 Identities=13% Similarity=0.072 Sum_probs=55.5
Q ss_pred CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCC
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQ 138 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~ 138 (202)
..|+|.+..++||+|.+|.+..+ |..+.++. ..+|+|++|.+.... ++-||+--......-.+|++.++.| .++ .
T Consensus 178 NtDGidi~~s~nV~I~n~~i~~g-DDcIaiks-g~nI~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~-~~t-~ 252 (362)
T 1czf_A 178 NTDAFDVGNSVGVNIIKPWVHNQ-DDCLAVNS-GENIWFTGGTCIGGH-GLSIGSVGDRSNNVVKNVTIEHSTV-SNS-E 252 (362)
T ss_dssp SCCSEEECSCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEESSC-CEEEEEECSSSCCEEEEEEEEEEEE-EEE-E
T ss_pred CCCceeecCcceEEEEeeEEecC-CCEEEEeC-CeEEEEEEEEEeCCc-eeEEeeccccCCCCEEEEEEEeeEE-ECC-c
Confidence 47899999999999999999865 55677765 389999999998643 5677762111112246899999998 543 3
Q ss_pred CCCcc
Q 041616 139 RMPRV 143 (202)
Q Consensus 139 R~Pr~ 143 (202)
+.-|+
T Consensus 253 ~GirI 257 (362)
T 1czf_A 253 NAVRI 257 (362)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 33344
No 25
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.37 E-value=0.014 Score=51.86 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=76.1
Q ss_pred CCceEEEEeeC--eEEEeeecCCCCCCeEEeecCCeEEEecceeccC---------CcceEEeeeCCccEEEecceeecC
Q 041616 37 PQKVWTTYRKH--MNITLHKLRKIDRDAIRLVIALKVWIDHNTLYKC---------QNGLIDVTRGSTDVTISNNWFRNQ 105 (202)
Q Consensus 37 ~~p~~IvF~~~--g~I~l~~I~~~~~Dai~i~~~~nVwIDHctfs~~---------~Dg~id~~~~s~~VTiS~n~f~~h 105 (202)
.+|+.|.|... .+|+...|...+.-+|.+. ++||.|+++++... .|| +|+. .+++|+|++|.|...
T Consensus 124 ~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDG-idi~-~s~nV~I~n~~i~~g 200 (362)
T 1czf_A 124 KKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDA-FDVG-NSVGVNIIKPWVHNQ 200 (362)
T ss_dssp CCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCS-EEEC-SCEEEEEESCEEECS
T ss_pred CCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCc-eeec-CcceEEEEeeEEecC
Confidence 45777777644 4444334466777889999 99999999999852 455 7874 689999999999987
Q ss_pred CeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcc------cCC---eEEEECceEEC
Q 041616 106 DKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRV------RHG---FAHVINNLYRK 157 (202)
Q Consensus 106 ~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~------r~G---~~hv~NN~~~n 157 (202)
+-+.-++++ .+|++.++.+ ....+ =.+ ..+ .+.+.|+.+.+
T Consensus 201 DDcIaiksg--------~nI~i~n~~~-~~ghG--isiGS~G~~~~~~v~nV~v~n~~~~~ 250 (362)
T 1czf_A 201 DDCLAVNSG--------ENIWFTGGTC-IGGHG--LSIGSVGDRSNNVVKNVTIEHSTVSN 250 (362)
T ss_dssp SCSEEESSE--------EEEEEESCEE-ESSCC--EEEEEECSSSCCEEEEEEEEEEEEEE
T ss_pred CCEEEEeCC--------eEEEEEEEEE-eCCce--eEEeeccccCCCCEEEEEEEeeEEEC
Confidence 777777753 5799999999 44321 111 112 46777777765
No 26
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.30 E-value=0.02 Score=50.32 Aligned_cols=78 Identities=17% Similarity=0.151 Sum_probs=56.3
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCCCC
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCN 137 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~ 137 (202)
...|+|.+ .++||+|.+|.++. .|..+.++.+ .+|+|++|.+.... ++-||+-.. ...-.+|++.++.| .++
T Consensus 150 ~NtDGidi-~s~nV~I~n~~i~~-gDDcIaiksg-~nI~i~n~~~~~gh-GisIGS~g~--~~~v~nV~v~n~~~-~~t- 221 (335)
T 1k5c_A 150 HNTDGFDV-SANNVTIQNCIVKN-QDDCIAINDG-NNIRFENNQCSGGH-GISIGSIAT--GKHVSNVVIKGNTV-TRS- 221 (335)
T ss_dssp CSCCSEEE-ECSSEEEESCEEES-SSCSEEEEEE-EEEEEESCEEESSC-CEEEEEECT--TCEEEEEEEESCEE-EEE-
T ss_pred CCCCeEcc-cCCeEEEEeeEEEc-CCCEEEeeCC-eeEEEEEEEEECCc-cCeEeeccC--CCCEEEEEEEeeEE-ECC-
Confidence 35799999 99999999999985 5667888765 89999999998632 466775421 11236799999999 553
Q ss_pred CCCCcc
Q 041616 138 QRMPRV 143 (202)
Q Consensus 138 ~R~Pr~ 143 (202)
.+.-|+
T Consensus 222 ~~girI 227 (335)
T 1k5c_A 222 MYGVRI 227 (335)
T ss_dssp EEEEEE
T ss_pred CceEEE
Confidence 334444
No 27
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.03 E-value=0.014 Score=51.20 Aligned_cols=106 Identities=18% Similarity=0.106 Sum_probs=78.1
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCCCeEEeecCCe-EEEecceeccC----------CcceEEeeeCCccEEEecceee
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDRDAIRLVIALK-VWIDHNTLYKC----------QNGLIDVTRGSTDVTISNNWFR 103 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~Dai~i~~~~n-VwIDHctfs~~----------~Dg~id~~~~s~~VTiS~n~f~ 103 (202)
.+|+.|.|...- +.+.+| ...+...|.+..++| |.|+++++... .|| +|+ .+++|+|++|.|.
T Consensus 95 ~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDG-idi--~s~nV~I~n~~i~ 170 (335)
T 1k5c_A 95 HKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDG-FDV--SANNVTIQNCIVK 170 (335)
T ss_dssp CCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCS-EEE--ECSSEEEESCEEE
T ss_pred CCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCe-Ecc--cCCeEEEEeeEEE
Confidence 468888887665 777766 677888999999999 99999999864 333 777 5899999999999
Q ss_pred cCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc----CC---eEEEECceEEC
Q 041616 104 NQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR----HG---FAHVINNLYRK 157 (202)
Q Consensus 104 ~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r----~G---~~hv~NN~~~n 157 (202)
..+-+.-++++ .+|++.++.+ ....+ =.+. .+ .+.+.|..+.+
T Consensus 171 ~gDDcIaiksg--------~nI~i~n~~~-~~ghG--isIGS~g~~~~v~nV~v~n~~~~~ 220 (335)
T 1k5c_A 171 NQDDCIAINDG--------NNIRFENNQC-SGGHG--ISIGSIATGKHVSNVVIKGNTVTR 220 (335)
T ss_dssp SSSCSEEEEEE--------EEEEEESCEE-ESSCC--EEEEEECTTCEEEEEEEESCEEEE
T ss_pred cCCCEEEeeCC--------eeEEEEEEEE-ECCcc--CeEeeccCCCCEEEEEEEeeEEEC
Confidence 87666666542 5799999999 44322 1221 12 46777777776
No 28
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=95.60 E-value=0.047 Score=53.13 Aligned_cols=85 Identities=13% Similarity=-0.004 Sum_probs=59.6
Q ss_pred eCeEEEeeecCCCCCCeEEeecCCeEEEecceeccC----CcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCC
Q 041616 46 KHMNITLHKLRKIDRDAIRLVIALKVWIDHNTLYKC----QNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDK 121 (202)
Q Consensus 46 ~~g~I~l~~I~~~~~Dai~i~~~~nVwIDHctfs~~----~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~ 121 (202)
.+..|+.-.|...+.|+|.|.+++||+|.+|++... ...-+.+..++.+|||++|.|.+...+.-|-...... .
T Consensus 183 ~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg--~ 260 (772)
T 3gqn_A 183 ENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAP--A 260 (772)
T ss_dssp EEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCTTSC--C
T ss_pred ceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeCCCC--c
Confidence 334444444556789999999999999999999543 2345666666789999999999888777665332211 1
Q ss_pred ceeEEEEceEe
Q 041616 122 NMKMTIAYNHF 132 (202)
Q Consensus 122 ~~~vT~hhN~f 132 (202)
..+|.+.+|+.
T Consensus 261 v~NV~I~gnis 271 (772)
T 3gqn_A 261 AYNISINGHMS 271 (772)
T ss_dssp CEEEEEEEEEE
T ss_pred cccEEEECCEE
Confidence 35677777666
No 29
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=95.33 E-value=0.059 Score=51.21 Aligned_cols=84 Identities=13% Similarity=-0.006 Sum_probs=58.1
Q ss_pred CeEEEeeecCCCCCCeEEeecCCeEEEecceeccCC----cceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCc
Q 041616 47 HMNITLHKLRKIDRDAIRLVIALKVWIDHNTLYKCQ----NGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKN 122 (202)
Q Consensus 47 ~g~I~l~~I~~~~~Dai~i~~~~nVwIDHctfs~~~----Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~ 122 (202)
+..|+.-.|...+.|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||++|.|.+...+.-|-...... ..
T Consensus 184 NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~--~v 261 (609)
T 3gq8_A 184 NIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAP--AA 261 (609)
T ss_dssp EEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECTTSC--CC
T ss_pred eEEEEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecCCCC--cc
Confidence 344443345567899999999999999999995431 345666666789999999999877776554332211 13
Q ss_pred eeEEEEceEe
Q 041616 123 MKMTIAYNHF 132 (202)
Q Consensus 123 ~~vT~hhN~f 132 (202)
.+|.+.+|++
T Consensus 262 ~NV~I~n~vs 271 (609)
T 3gq8_A 262 YNISINGHMS 271 (609)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEECCEe
Confidence 5677777655
No 30
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=93.49 E-value=0.24 Score=43.27 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=79.2
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCCCeEEeecCCeEEEecceeccC---------CcceEEeeeCCccEEEecceeecC
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDRDAIRLVIALKVWIDHNTLYKC---------QNGLIDVTRGSTDVTISNNWFRNQ 105 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~Dai~i~~~~nVwIDHctfs~~---------~Dg~id~~~~s~~VTiS~n~f~~h 105 (202)
.+|+.|.|...-.+.+.+| ...+..+|.+..++||.|+++++... .|| +|+ ..+++|+|++|.|...
T Consensus 102 ~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~-~~s~nV~I~n~~i~~g 179 (339)
T 1ia5_A 102 TKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDI-GTSTYVTISGATVYNQ 179 (339)
T ss_dssp CCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEE-ESCEEEEEESCEEECS
T ss_pred CCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEe-cCCceEEEEeeEEEcC
Confidence 3577777765555555554 77888999999999999999999863 555 787 4689999999999876
Q ss_pred CeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc------CC---eEEEECceEECc
Q 041616 106 DKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR------HG---FAHVINNLYRKW 158 (202)
Q Consensus 106 ~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r------~G---~~hv~NN~~~n~ 158 (202)
+-+.-++++ .+|++.++.+ ..... =.+. .+ .+.+.|+.+.+.
T Consensus 180 DDcIaiksg--------~nI~i~n~~~-~~ghG--isiGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 180 DDCVAVNSG--------ENIYFSGGYC-SGGHG--LSIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp SCSEEESSE--------EEEEEESCEE-ESSSC--EEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred CCeEEEeCC--------eEEEEEeEEE-ECCce--EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 666666653 5799999999 44322 1120 12 478888888773
No 31
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=93.12 E-value=0.3 Score=42.62 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=79.2
Q ss_pred CCceEEEEeeCeEEEeeec--CCCCCCeEEeecCCeEEEecceeccC---------CcceEEeeeCCccEEEecceeecC
Q 041616 37 PQKVWTTYRKHMNITLHKL--RKIDRDAIRLVIALKVWIDHNTLYKC---------QNGLIDVTRGSTDVTISNNWFRNQ 105 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--~~~~~Dai~i~~~~nVwIDHctfs~~---------~Dg~id~~~~s~~VTiS~n~f~~h 105 (202)
.+|+.|.|...-.+.+.+| ...+..+|.+..+++|.|+++++... .|| +|+. .+++|+|++|.|...
T Consensus 98 ~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~~-~s~nV~I~n~~i~~g 175 (339)
T 2iq7_A 98 TKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDVG-SSTGVYISGANVKNQ 175 (339)
T ss_dssp CCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEEE-SCEEEEEESCEEECS
T ss_pred CCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEEc-CcceEEEEecEEecC
Confidence 4577777765555555554 77788999999999999999999863 455 7774 589999999999876
Q ss_pred CeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCccc------CC---eEEEECceEECc
Q 041616 106 DKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR------HG---FAHVINNLYRKW 158 (202)
Q Consensus 106 ~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r------~G---~~hv~NN~~~n~ 158 (202)
+-+.-++++ .+|++.++.+ ..... =.+. .+ .+.+.|+.+.+.
T Consensus 176 DDciaiksg--------~nI~i~n~~~-~~ghG--isiGSlg~~~~~~v~nV~v~n~~~~~~ 226 (339)
T 2iq7_A 176 DDCLAINSG--------TNITFTGGTC-SGGHG--LSIGSVGGRSDNTVKTVTISNSKIVNS 226 (339)
T ss_dssp SCSEEESSE--------EEEEEESCEE-ESSCC--EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred CCEEEEcCC--------ccEEEEeEEE-ECCce--EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 666666653 5799999999 44321 1120 12 478888888773
No 32
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=92.65 E-value=0.87 Score=39.36 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=36.7
Q ss_pred CCCCCeEEeec-CCeEEEecceeccCCcceEEee------eCCccEEEecceeec
Q 041616 57 KIDRDAIRLVI-ALKVWIDHNTLYKCQNGLIDVT------RGSTDVTISNNWFRN 104 (202)
Q Consensus 57 ~~~~Dai~i~~-~~nVwIDHctfs~~~Dg~id~~------~~s~~VTiS~n~f~~ 104 (202)
....|+|.+.. +++++|.+|.+....|+.+-+. ..+.+++|++|.+.+
T Consensus 192 ~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~ 246 (377)
T 2pyg_A 192 ANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYD 246 (377)
T ss_dssp SCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEES
T ss_pred ccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEc
Confidence 34579999876 8999999999998777765531 356788888888764
No 33
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=92.53 E-value=0.45 Score=41.98 Aligned_cols=90 Identities=17% Similarity=0.154 Sum_probs=59.3
Q ss_pred CeEEeecCCeEEEecceeccCC----------------------cceEEeeeCCccEEEecceeecCCeeee-eCCCCCc
Q 041616 61 DAIRLVIALKVWIDHNTLYKCQ----------------------NGLIDVTRGSTDVTISNNWFRNQDKIKL-LGHDDGY 117 (202)
Q Consensus 61 Dai~i~~~~nVwIDHctfs~~~----------------------Dg~id~~~~s~~VTiS~n~f~~h~k~~l-iG~~d~~ 117 (202)
-+|.|..++||+|.++.|..+. +..|.+. ++++|-|-.|.|+...-.++ +..
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~id~~~---- 180 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTL---- 180 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEEEEES----
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcEeecc----
Confidence 3688888999999999998541 1234553 67889999999986544433 211
Q ss_pred cCCCceeEEEEceEecCCCCCCCCccc---------CCeEEEECceE-ECccc
Q 041616 118 IRDKNMKMTIAYNHFGRNCNQRMPRVR---------HGFAHVINNLY-RKWTQ 160 (202)
Q Consensus 118 ~~d~~~~vT~hhN~f~~~~~~R~Pr~r---------~G~~hv~NN~~-~n~~~ 160 (202)
....||+.+|+| .+. ...-++. .-.+-+.+|+| .+...
T Consensus 181 ---~s~~vTISnn~f-~~H-~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~ 228 (346)
T 1pxz_A 181 ---GSTGITISNNHF-FNH-HKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQ 228 (346)
T ss_dssp ---SCEEEEEESCEE-ESE-EEEEEESCCSSCGGGGGCEEEEESCEECSSEEE
T ss_pred ---CcceEEEEeeEE-ecC-CceeEECCCCccccCCceEEEEEeeEEeCCccc
Confidence 135799999999 443 2222221 12678899999 77543
No 34
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=92.41 E-value=0.71 Score=40.78 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=61.1
Q ss_pred CCeEEeecCCeEEEecceeccCC-----------cceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEE
Q 041616 60 RDAIRLVIALKVWIDHNTLYKCQ-----------NGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIA 128 (202)
Q Consensus 60 ~Dai~i~~~~nVwIDHctfs~~~-----------Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~h 128 (202)
+.+|.|.+++||+|-++.|..+. ...|.+ .++++|=|-.|.|+...-.++--. .....||+-
T Consensus 82 G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~Dg~idi~------~~s~~vTIS 154 (340)
T 3zsc_A 82 GGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINV-ENSHHIWIDHITFVNGNDGAVDIK------KYSNYITVS 154 (340)
T ss_dssp EEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEE-ESCEEEEEESCEEESCSSCSEEEE------TTCEEEEEE
T ss_pred cCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEE-ecCCcEEEEeeeeccCCccceEEe------cCCceEEEE
Confidence 45788888999999999999752 233555 357888888888886532222111 123679999
Q ss_pred ceEecCCCCCCCCcccC------------CeEEEECceEECccc
Q 041616 129 YNHFGRNCNQRMPRVRH------------GFAHVINNLYRKWTQ 160 (202)
Q Consensus 129 hN~f~~~~~~R~Pr~r~------------G~~hv~NN~~~n~~~ 160 (202)
+|+| .+.. +.-++.. -++=+.+|+|.+...
T Consensus 155 nn~f-~~h~-k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~ 196 (340)
T 3zsc_A 155 WNKF-VDHD-KVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQ 196 (340)
T ss_dssp SCEE-ESCS-BCCEECCCTTSCHHHHHHSCEEEEESCEEESCCB
T ss_pred CcEe-ccCc-eeeEeCcCCCCccccccCCcEEEEECeEecCCCC
Confidence 9999 5432 2323321 168889999988643
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=91.33 E-value=0.42 Score=43.87 Aligned_cols=93 Identities=11% Similarity=0.017 Sum_probs=56.3
Q ss_pred CCceEEEEeeCeEEEeeec--------C------CCCCCeEEeecCCeEEEecceeccCCcce--EEeeeCCccEEEecc
Q 041616 37 PQKVWTTYRKHMNITLHKL--------R------KIDRDAIRLVIALKVWIDHNTLYKCQNGL--IDVTRGSTDVTISNN 100 (202)
Q Consensus 37 ~~p~~IvF~~~g~I~l~~I--------~------~~~~Dai~i~~~~nVwIDHctfs~~~Dg~--id~~~~s~~VTiS~n 100 (202)
..|+.|.|...-.+.+.+| . ....|+|.+ .++||+|.+|++....|+. .+ ..++.+|+|++|
T Consensus 130 ~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~-~~~~~NV~V~n~ 207 (464)
T 1h80_A 130 KNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH-WSRNGIIERIKQNNALFGYGLIQ-TYGADNILFRNL 207 (464)
T ss_dssp CBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE-EEEEEEEEEEEEESCCTTCEEEE-ESEEEEEEEEEE
T ss_pred CCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee-eccCEEEeceEEecCCCeEEecc-cCCEeEEEEEee
Confidence 3577777765555555543 1 113466666 7889999999999876543 33 346789999999
Q ss_pred eeecCCeeeeeCCCCC----ccCCCceeEEEEceEe
Q 041616 101 WFRNQDKIKLLGHDDG----YIRDKNMKMTIAYNHF 132 (202)
Q Consensus 101 ~f~~h~k~~liG~~d~----~~~d~~~~vT~hhN~f 132 (202)
.|.. ..++-|...+. .....-.+|+|.+..+
T Consensus 208 ~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 208 HSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp EEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred EEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 9877 33332322210 0001235688888887
No 36
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=91.31 E-value=0.34 Score=45.29 Aligned_cols=79 Identities=8% Similarity=-0.055 Sum_probs=56.3
Q ss_pred eEEEeeec---CCCCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceee-cCCee-eeeCCCCCccCCCc
Q 041616 48 MNITLHKL---RKIDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFR-NQDKI-KLLGHDDGYIRDKN 122 (202)
Q Consensus 48 g~I~l~~I---~~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~-~h~k~-~liG~~d~~~~d~~ 122 (202)
.+|+...+ ..+..|+|.+. +||-|.+|.|..+.| .+.++. .+|+|++|.+. .|.-+ .-+|+... .-
T Consensus 322 V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gDD-cIaIks--~NI~I~n~~~~~~~g~~~IsiGs~~~----~V 392 (549)
T 1x0c_A 322 CRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDDD-GLKMYY--SNVTARNIVMWKESVAPVVEFGWTPR----NT 392 (549)
T ss_dssp EEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESSC-CEECCS--SSEEEEEEEEEECSSSCSEECCBSCC----CE
T ss_pred EEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCCC-EEEECC--CCEEEEeeEEEcCCCCceEEECCCCC----cE
Confidence 45554333 13347888888 999999999998766 778764 89999999997 35545 66887422 23
Q ss_pred eeEEEEceEecCCC
Q 041616 123 MKMTIAYNHFGRNC 136 (202)
Q Consensus 123 ~~vT~hhN~f~~~~ 136 (202)
.+|++.+..+ .++
T Consensus 393 ~NV~v~n~~i-~~s 405 (549)
T 1x0c_A 393 ENVLFDNVDV-IHQ 405 (549)
T ss_dssp EEEEEEEEEE-EEC
T ss_pred EEEEEEeeEE-ECc
Confidence 6788888888 444
No 37
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=91.17 E-value=0.33 Score=45.71 Aligned_cols=68 Identities=9% Similarity=0.028 Sum_probs=51.7
Q ss_pred CCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceee-cCCee-eeeCCCCCccCCCceeEEEEceEecCCC
Q 041616 59 DRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFR-NQDKI-KLLGHDDGYIRDKNMKMTIAYNHFGRNC 136 (202)
Q Consensus 59 ~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~-~h~k~-~liG~~d~~~~d~~~~vT~hhN~f~~~~ 136 (202)
..|||.+. +||.|.+|.|..+.| .+.++ +.+|+|++|.+. .|..+ .-+|+... .-.+|++.+..+ .++
T Consensus 374 nTDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~NI~I~nc~i~~g~g~g~IsIGS~~g----~V~NV~v~N~~i-~~~ 443 (574)
T 1ogo_X 374 QTDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YSGASVSRATIWKCHNDPIIQMGWTSR----DISGVTIDTLNV-IHT 443 (574)
T ss_dssp TCCCCBCC--TTCEEEEEEEEESSC-SEECC--STTCEEEEEEEEECSSSCSEECCSSCC----CEEEEEEEEEEE-EEC
T ss_pred CCccCccc--CCEEEEeeEEECCCC-EEEEC--CccEEEEeEEEECCCCCceEEEcCCCC----cEEEEEEEeEEE-ECC
Confidence 38899988 999999999998877 77775 399999999986 45555 67887422 235788888887 443
No 38
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=90.76 E-value=0.51 Score=42.52 Aligned_cols=108 Identities=7% Similarity=-0.068 Sum_probs=78.7
Q ss_pred CceEEEEeeCeEEEeeec--CCCCCCeEEeecCCeEEEecceecc----CCcceEEeeeCCccEEEecceeecCCeeeee
Q 041616 38 QKVWTTYRKHMNITLHKL--RKIDRDAIRLVIALKVWIDHNTLYK----CQNGLIDVTRGSTDVTISNNWFRNQDKIKLL 111 (202)
Q Consensus 38 ~p~~IvF~~~g~I~l~~I--~~~~~Dai~i~~~~nVwIDHctfs~----~~Dg~id~~~~s~~VTiS~n~f~~h~k~~li 111 (202)
+|+.|.|...-.+.+++| ...+..+|.+..++||.|++|++.. ..|| +|+.. ++|+|++|.|...+-+.-+
T Consensus 126 rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~~d~~ntDG-idi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 126 GARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDG-IDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp CCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEECCSSTTCCS-EEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred CceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEECCCCCCCcc-EeecC--CeEEEEeeEEeCCCCeEEe
Confidence 588888876666666665 6667889999999999999999986 3566 67765 8999999999987777777
Q ss_pred CCCCCccCCCceeEEEEceEecCCCCCCCCccc----CC---eEEEECceEECc
Q 041616 112 GHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR----HG---FAHVINNLYRKW 158 (202)
Q Consensus 112 G~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r----~G---~~hv~NN~~~n~ 158 (202)
+++ ..+|++.++.+ ... +.=++. .+ .+.+.|+.+.+.
T Consensus 203 ~s~-------~~nI~I~n~~~-~~~--~GisIGS~g~~~~v~nV~v~n~~~~~~ 246 (422)
T 1rmg_A 203 KSP-------ANNILVESIYC-NWS--GGCAMGSLGADTDVTDIVYRNVYTWSS 246 (422)
T ss_dssp EEE-------EEEEEEEEEEE-ESS--SEEEEEEECTTEEEEEEEEEEEEEESS
T ss_pred CCC-------CcCEEEEeEEE-cCC--cceeecccCCCCcEEEEEEEeEEEecc
Confidence 652 25799999998 332 211110 11 467888888763
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=89.69 E-value=0.8 Score=42.45 Aligned_cols=38 Identities=8% Similarity=0.077 Sum_probs=24.3
Q ss_pred CCeEEEecceeccCCcce----------EEeeeCCccEEEecceeecCCe
Q 041616 68 ALKVWIDHNTLYKCQNGL----------IDVTRGSTDVTISNNWFRNQDK 107 (202)
Q Consensus 68 ~~nVwIDHctfs~~~Dg~----------id~~~~s~~VTiS~n~f~~h~k 107 (202)
+.+|.|+.++|..+.... +-+. .++++|.+|.|.+...
T Consensus 93 g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~--G~~~~I~nn~I~~~~~ 140 (506)
T 1dbg_A 93 GEHLILEGIWFKDGNRAIQAWKSHGPGLVAIY--GSYNRITACVFDCFDE 140 (506)
T ss_dssp SSSEEEESCEEEEECCCTTTCCTTSCCSEEEC--SSSCEEESCEEESCCS
T ss_pred cCCEEEECeEEECCCcceeeeecccccceEEe--cCCeEEEeeEEEcCCC
Confidence 467888888887653222 2222 3778888888886533
No 40
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=89.66 E-value=2 Score=38.04 Aligned_cols=91 Identities=13% Similarity=0.155 Sum_probs=59.1
Q ss_pred CeEEee-cCCeEEEecceecc-------CCcceEEeeeCCccEEEecceeecCCeeee-eCCCCCccCCCceeEEEEceE
Q 041616 61 DAIRLV-IALKVWIDHNTLYK-------CQNGLIDVTRGSTDVTISNNWFRNQDKIKL-LGHDDGYIRDKNMKMTIAYNH 131 (202)
Q Consensus 61 Dai~i~-~~~nVwIDHctfs~-------~~Dg~id~~~~s~~VTiS~n~f~~h~k~~l-iG~~d~~~~d~~~~vT~hhN~ 131 (202)
-+|.|. +++||+|-++.|.. ..|+ |.+. ++++|-|-.|.|..-...++ .|. .+...||+-+|+
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~Da-I~i~-~s~nVwIDHcs~s~~~d~~~~~g~------~~s~~VTISnn~ 195 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDINPKYVWGGDA-ITLD-DCDLVWIDHVTTARIGRQHYVLGT------SADNRVSLTNNY 195 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEECTTEETSCCS-EEEC-SCEEEEEESCEEEEESSCSEEECC------CTTCEEEEESCE
T ss_pred ceEEEecCCCcEEEeCeEEEcccccccccCCc-eeec-CCCcEEEEeeEeecCCCCcEEecc------cCcceEEEECcE
Confidence 357777 78999999999995 3454 4553 68899999998875322222 121 123589999999
Q ss_pred ecCCCCCCCCccc---------CC---eEEEECceEECccc
Q 041616 132 FGRNCNQRMPRVR---------HG---FAHVINNLYRKWTQ 160 (202)
Q Consensus 132 f~~~~~~R~Pr~r---------~G---~~hv~NN~~~n~~~ 160 (202)
| .......-+.. .| .+-+.+|+|.+...
T Consensus 196 f-~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~ 235 (359)
T 1idk_A 196 I-DGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSG 235 (359)
T ss_dssp E-ECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCS
T ss_pred e-cCCcccccccCccccceEEEEecCCCeEEEceEeecCcc
Confidence 9 54332111111 12 68889999997643
No 41
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=89.13 E-value=3.7 Score=36.24 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=93.4
Q ss_pred CCCCCCCcEEEEEEcCCCCCCCCCCCCchhhhhhhCCCceEEE----EeeCeEEEe------------------------
Q 041616 1 MTNNVGKDVVRYKVTDPGDDTINPKPGTLRYEAILIPQKVWTT----YRKHMNITL------------------------ 52 (202)
Q Consensus 1 ~tGGrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~~~~p~~Iv----F~~~g~I~l------------------------ 52 (202)
+|||+||++ |+||+|+| ||+|+.+ ++||+|+ |+..++|.+
T Consensus 14 tTGG~gg~~--v~Vtt~~~---------L~~al~~-~~prvIvv~gtid~~g~~g~~~~~~c~~~~~~~~~~~~i~~~~~ 81 (359)
T 1qcx_A 14 VTGGGSASP--VYPTTTDE---------LVSYLGD-NEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLHSW 81 (359)
T ss_dssp CCTTTTCCC--BCCCSHHH---------HHHHHHS-SSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGGH
T ss_pred CcCCCCcce--EEeCCHHH---------HHHHHcC-CCCeEEEECcEEeeccccccccccccccccccccccceeccccc
Confidence 589999999 99999988 9999999 9999999 554332211
Q ss_pred --------------------eec---------C-----CCCCCeEEee-cCCeEEEecceeccCC------cceEEeeeC
Q 041616 53 --------------------HKL---------R-----KIDRDAIRLV-IALKVWIDHNTLYKCQ------NGLIDVTRG 91 (202)
Q Consensus 53 --------------------~~I---------~-----~~~~Dai~i~-~~~nVwIDHctfs~~~------Dg~id~~~~ 91 (202)
..| . .-.+.+|.|. +++||+|-++.|..+. +..|.+. +
T Consensus 82 ~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~ 160 (359)
T 1qcx_A 82 CDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-D 160 (359)
T ss_dssp HHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-S
T ss_pred ccccccCCccceeeecccccceEEeCCCceEEecCCceEEecceEEEecCCCCEEEeCcEEEecCCcccccCceeEec-C
Confidence 011 0 1124578888 8999999999999642 1234554 5
Q ss_pred CccEEEecceeecCCeeee-eCCCCCccCCCceeEEEEceEecCCCCCCCCccc---------CC---eEEEECceEECc
Q 041616 92 STDVTISNNWFRNQDKIKL-LGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVR---------HG---FAHVINNLYRKW 158 (202)
Q Consensus 92 s~~VTiS~n~f~~h~k~~l-iG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r---------~G---~~hv~NN~~~n~ 158 (202)
+++|-|-.|.|..-...++ .+. ....+||+-+|+| ........+.+ .| .+=+.+|+|.+.
T Consensus 161 s~nvwIDHcs~s~~~d~~~~~~~------~~s~~vTISnn~f-~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 161 SDLVWIDHVTTARIGRQHIVLGT------SADNRVTISYSLI-DGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNL 233 (359)
T ss_dssp CCCEEEESCEEEEESSCSEEECS------SCCEEEEEESCEE-ECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESB
T ss_pred CceEEEEeeEeeccCcCceeecc------cccccEEEECcEe-cCCccccccCcccccceeEEecCCCCeehcccEeccC
Confidence 8888888888875322222 221 1236899999999 54432221111 12 567789999875
Q ss_pred cc
Q 041616 159 TQ 160 (202)
Q Consensus 159 ~~ 160 (202)
..
T Consensus 234 ~~ 235 (359)
T 1qcx_A 234 SG 235 (359)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 42
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=89.13 E-value=1.9 Score=40.61 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCCCCeEEeec-----------CCeEEEecceeccCCcceEEee----eCCccEEEecceeecCCeeeeeCCCCCccCCC
Q 041616 57 KIDRDAIRLVI-----------ALKVWIDHNTLYKCQNGLIDVT----RGSTDVTISNNWFRNQDKIKLLGHDDGYIRDK 121 (202)
Q Consensus 57 ~~~~Dai~i~~-----------~~nVwIDHctfs~~~Dg~id~~----~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~ 121 (202)
..+.|+|.|.. ++||+|.+|.+..+.+... +. .+..+|+|++|.|.+...+.-|....... ..
T Consensus 399 ~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~-iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g-G~ 476 (608)
T 2uvf_A 399 DTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIV-TGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG-GG 476 (608)
T ss_dssp ECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEE-EESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC-CE
T ss_pred ecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEE-EcccCCCCEEEEEEEeEEEECCCceEEEeeecCCC-ce
Confidence 35789999964 5899999999998765532 32 23479999999999887777665321110 01
Q ss_pred ceeEEEEceEe
Q 041616 122 NMKMTIAYNHF 132 (202)
Q Consensus 122 ~~~vT~hhN~f 132 (202)
-.+|+|-++.+
T Consensus 477 v~nI~~~ni~m 487 (608)
T 2uvf_A 477 ARNVTFRNNAM 487 (608)
T ss_dssp EEEEEEEEEEE
T ss_pred EECcEEEeeEE
Confidence 24566655555
No 43
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=88.31 E-value=0.83 Score=40.01 Aligned_cols=72 Identities=8% Similarity=0.046 Sum_probs=49.7
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEee-------eCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEce
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDVT-------RGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYN 130 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~-------~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN 130 (202)
.+.|+|.|..++||+|.+|.+..+. | +.+. .+..+|+|++|.|.+...+.-|...+... ..-.+|+|.+.
T Consensus 186 ~gDDcIaiksg~nI~i~n~~~~~gh-G-isiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~-G~v~nI~~~ni 262 (349)
T 1hg8_A 186 NQDDCVAVTSGTNIVVSNMYCSGGH-G-LSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGAT-GTINNVTYQNI 262 (349)
T ss_dssp CSSCSEEESSEEEEEEEEEEEESSC-C-EEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCC-EEEEEEEEEEE
T ss_pred cCCCeEEeeCCeEEEEEeEEEeCCc-c-eEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCC-ccccceEEEEE
Confidence 5789999999999999999998765 4 5552 23579999999999877676664322210 01234555555
Q ss_pred Ee
Q 041616 131 HF 132 (202)
Q Consensus 131 ~f 132 (202)
.+
T Consensus 263 ~~ 264 (349)
T 1hg8_A 263 AL 264 (349)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 44
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=88.15 E-value=0.84 Score=42.30 Aligned_cols=12 Identities=17% Similarity=0.219 Sum_probs=9.3
Q ss_pred CeEEEecceecc
Q 041616 69 LKVWIDHNTLYK 80 (202)
Q Consensus 69 ~nVwIDHctfs~ 80 (202)
.+..|+||.|..
T Consensus 196 ~~~~I~nN~f~~ 207 (506)
T 1dbg_A 196 MYHRVDHCFFSN 207 (506)
T ss_dssp CCCEEESCEEEE
T ss_pred CCeEEeCcEEcc
Confidence 578888888874
No 45
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=86.83 E-value=1.6 Score=39.64 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=49.5
Q ss_pred CCCCCeEEeec------------CCeEEEeccee--ccCCcceEEee----eCCccEEEecceeecCCeeeeeCCCCCcc
Q 041616 57 KIDRDAIRLVI------------ALKVWIDHNTL--YKCQNGLIDVT----RGSTDVTISNNWFRNQDKIKLLGHDDGYI 118 (202)
Q Consensus 57 ~~~~Dai~i~~------------~~nVwIDHctf--s~~~Dg~id~~----~~s~~VTiS~n~f~~h~k~~liG~~d~~~ 118 (202)
..+.|+|.|.. ++||+|.+|.+ ..+.. .+.+. .+..+|||++|.|.+...+.-|.......
T Consensus 257 ~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~-gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~g 335 (448)
T 3jur_A 257 DTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHG-GLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRG 335 (448)
T ss_dssp EESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSE-EEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTTC
T ss_pred EeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcc-eEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCCC
Confidence 35789999974 58999999999 43332 45542 23479999999998877777665422111
Q ss_pred CCCceeEEEEceEe
Q 041616 119 RDKNMKMTIAYNHF 132 (202)
Q Consensus 119 ~d~~~~vT~hhN~f 132 (202)
..-.+|||-+...
T Consensus 336 -G~v~nI~f~ni~m 348 (448)
T 3jur_A 336 -GYMENIFFIDNVA 348 (448)
T ss_dssp -SEEEEEEEESCEE
T ss_pred -ceEeeEEEEEEEE
Confidence 0124677777766
No 46
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=85.57 E-value=5.1 Score=35.32 Aligned_cols=96 Identities=16% Similarity=0.184 Sum_probs=57.3
Q ss_pred eEEeecCCeEEEecceeccCCc---------------ceEEeeeCCccEEEecceeecC-----CeeeeeCCC----CCc
Q 041616 62 AIRLVIALKVWIDHNTLYKCQN---------------GLIDVTRGSTDVTISNNWFRNQ-----DKIKLLGHD----DGY 117 (202)
Q Consensus 62 ai~i~~~~nVwIDHctfs~~~D---------------g~id~~~~s~~VTiS~n~f~~h-----~k~~liG~~----d~~ 117 (202)
+|.|.+++||+|-+..|....| ..|.+ .++++|=|-.|.|+.. ....++|.. |+.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i-~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl 175 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGA 175 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe-cCCCcEEEEeeEEeccccCccccccccCccccccccc
Confidence 3455668999999999985421 24555 4577777777777632 222344432 221
Q ss_pred c--CCCceeEEEEceEecCCCCCCCCccc---------CC--eEEEECceEECccc
Q 041616 118 I--RDKNMKMTIAYNHFGRNCNQRMPRVR---------HG--FAHVINNLYRKWTQ 160 (202)
Q Consensus 118 ~--~d~~~~vT~hhN~f~~~~~~R~Pr~r---------~G--~~hv~NN~~~n~~~ 160 (202)
. ..+...||+-+|+| .+... .=++. .| ++=+.+|+|.+...
T Consensus 176 ~Di~~~s~~VTiS~n~f-~~h~k-~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~ 229 (355)
T 1pcl_A 176 LDIKKGSDYVTISYSRF-ELHDK-TILIGHSDSNGSQDSGKLRVTFHNNVFDRVTE 229 (355)
T ss_pred eeeecCCCcEEEEeeEE-cCCCc-eEEeCCCCCCcccccCcceEEEECcEEeCCcc
Confidence 1 11246899999999 54432 22221 12 58888999987653
No 47
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=85.10 E-value=1.7 Score=40.60 Aligned_cols=105 Identities=9% Similarity=-0.001 Sum_probs=67.9
Q ss_pred CceEEEE------eeCeEEEeeec--CCCCCCeEEeecC--Ce--EEEecceec----cCCcceEEeeeCCccEEEecce
Q 041616 38 QKVWTTY------RKHMNITLHKL--RKIDRDAIRLVIA--LK--VWIDHNTLY----KCQNGLIDVTRGSTDVTISNNW 101 (202)
Q Consensus 38 ~p~~IvF------~~~g~I~l~~I--~~~~~Dai~i~~~--~n--VwIDHctfs----~~~Dg~id~~~~s~~VTiS~n~ 101 (202)
.|+.|.| ..+-.|.+.+| ...+.=.+.|... ++ |-||+++.. +-.|| +|+. ++|+|++|.
T Consensus 277 rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDG-idi~---~nV~I~n~~ 352 (549)
T 1x0c_A 277 NNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDG-LEMY---PGTILQDVF 352 (549)
T ss_dssp CSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCC-CBCC---TTCEEEEEE
T ss_pred CCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCc-cccc---CCEEEEeeE
Confidence 3555555 55555555554 5555556776643 58 999999864 23666 6664 899999999
Q ss_pred eecCCeeeeeCCCCCccCCCceeEEEEceEecCCCCCCCCcccCC-------eEEEECceEEC
Q 041616 102 FRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRNCNQRMPRVRHG-------FAHVINNLYRK 157 (202)
Q Consensus 102 f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~~~~R~Pr~r~G-------~~hv~NN~~~n 157 (202)
|...+-+.-+++ .+|++.++.+ . .....+++..| .+++-|..+.+
T Consensus 353 i~~gDDcIaIks---------~NI~I~n~~~-~-~~~g~~~IsiGs~~~~V~NV~v~n~~i~~ 404 (549)
T 1x0c_A 353 YHTDDDGLKMYY---------SNVTARNIVM-W-KESVAPVVEFGWTPRNTENVLFDNVDVIH 404 (549)
T ss_dssp EEESSCCEECCS---------SSEEEEEEEE-E-ECSSSCSEECCBSCCCEEEEEEEEEEEEE
T ss_pred EeCCCCEEEECC---------CCEEEEeeEE-E-cCCCCceEEECCCCCcEEEEEEEeeEEEC
Confidence 998777777765 3588888887 2 22233433222 46777777765
No 48
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=84.52 E-value=3.2 Score=36.26 Aligned_cols=92 Identities=24% Similarity=0.328 Sum_probs=56.5
Q ss_pred eEEeecCCeEEEecceeccCC---cceEEeeeCCccEEEecceeecCCeeeeeCCCCCcc-------CCCceeEEEEceE
Q 041616 62 AIRLVIALKVWIDHNTLYKCQ---NGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYI-------RDKNMKMTIAYNH 131 (202)
Q Consensus 62 ai~i~~~~nVwIDHctfs~~~---Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~-------~d~~~~vT~hhN~ 131 (202)
+|.|..++||+|-++.|.... ...|.+...+++|=|-.|.|+.. +.|..+... ..+...||+-+|+
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~----~~g~~~~~~~Dgl~di~~~s~~VTISnn~ 171 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSE----FPGNGDSDYYDGLVDMKRNAEYITVSWNK 171 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECC----SSTTSCTTSSCCSEEECTTCEEEEEESCE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEecc----ccCCcCccccCcceEecCCCceEEEEceE
Confidence 456667899999999999752 33456643478888888888631 122221111 1124689999999
Q ss_pred ecCCCCCCCCcccC--------CeEEEECceEECcc
Q 041616 132 FGRNCNQRMPRVRH--------GFAHVINNLYRKWT 159 (202)
Q Consensus 132 f~~~~~~R~Pr~r~--------G~~hv~NN~~~n~~ 159 (202)
| .+. ...=++.. -.+=+.+|+|.+..
T Consensus 172 f-~~h-~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~ 205 (326)
T 3vmv_A 172 F-ENH-WKTMLVGHTDNASLAPDKITYHHNYFNNLN 205 (326)
T ss_dssp E-EEE-EECEEECSSSCGGGCCEEEEEESCEEEEEE
T ss_pred E-ecC-ceEEEECCCCCCcccCccEEEEeeEecCCc
Confidence 9 442 22222221 15778899998754
No 49
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=84.36 E-value=2.9 Score=36.66 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=52.8
Q ss_pred CCCCCeEEee------cCCeEEEecceeccCCcceEEee---eCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEE
Q 041616 57 KIDRDAIRLV------IALKVWIDHNTLYKCQNGLIDVT---RGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTI 127 (202)
Q Consensus 57 ~~~~Dai~i~------~~~nVwIDHctfs~~~Dg~id~~---~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~ 127 (202)
..+.|+|.|. .++||+|.+|.+..+. | +.+. .+..+|+|++|.|.+...+.-|-...... -.-.+|+|
T Consensus 220 ~~gDDcIaiks~~~~~~s~nI~I~n~~~~~gh-G-isiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g~~-G~v~ni~f 296 (376)
T 1bhe_A 220 ATGDDNVAIKAYKGRAETRNISILHNDFGTGH-G-MSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAA-GVVNGVRY 296 (376)
T ss_dssp ECSSCSEEEEECTTSCCEEEEEEEEEEECSSS-C-EEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTC-CEEEEEEE
T ss_pred ecCCCeEEEcccCCCCCceEEEEEeeEEEccc-c-EEeccCCccEeeEEEEeeEEeCCCcEEEEEEecCCC-ceEeeEEE
Confidence 4668999998 5899999999998753 3 4441 25689999999999887776654321110 01256888
Q ss_pred EceEecCCC
Q 041616 128 AYNHFGRNC 136 (202)
Q Consensus 128 hhN~f~~~~ 136 (202)
-+..+ .+.
T Consensus 297 ~ni~~-~~v 304 (376)
T 1bhe_A 297 SNVVM-KNV 304 (376)
T ss_dssp EEEEE-ESC
T ss_pred EeEEE-eCC
Confidence 88777 443
No 50
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=83.33 E-value=4.6 Score=35.17 Aligned_cols=97 Identities=22% Similarity=0.178 Sum_probs=59.5
Q ss_pred CeEEee-cCCeEEEecceeccCC----cceEEeee----CCccEEEecceeecCC-eeeeeCCC--CCcc--CCCceeEE
Q 041616 61 DAIRLV-IALKVWIDHNTLYKCQ----NGLIDVTR----GSTDVTISNNWFRNQD-KIKLLGHD--DGYI--RDKNMKMT 126 (202)
Q Consensus 61 Dai~i~-~~~nVwIDHctfs~~~----Dg~id~~~----~s~~VTiS~n~f~~h~-k~~liG~~--d~~~--~d~~~~vT 126 (202)
-+|.|. +++||+|-+..|.... ...|.+.. .+++|-|-.|.|+... .+.-.+.. |... ..+...||
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VT 165 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVT 165 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEE
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEE
Confidence 467888 8999999999999763 23456643 5889999999996321 11101111 1110 11246899
Q ss_pred EEceEecCCCCCCCCccc---------CCeEEEECceEECcc
Q 041616 127 IAYNHFGRNCNQRMPRVR---------HGFAHVINNLYRKWT 159 (202)
Q Consensus 127 ~hhN~f~~~~~~R~Pr~r---------~G~~hv~NN~~~n~~ 159 (202)
+-+|+| .+. ...=++. ..++=+.+|+|.+..
T Consensus 166 ISnn~f-~~h-~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~ 205 (330)
T 2qy1_A 166 VSYNYV-YNY-QKVALNGYSDSDTKNSAARTTYHHNRFENVE 205 (330)
T ss_dssp EESCEE-EEE-EECCEESSSTTCGGGGGCEEEEESCEEEEEE
T ss_pred EEccee-ccC-CeEEEECCCCccccCCCceEEEECcEEcCCC
Confidence 999999 432 2222222 137888999998754
No 51
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=82.75 E-value=9.1 Score=34.93 Aligned_cols=83 Identities=10% Similarity=-0.051 Sum_probs=55.2
Q ss_pred EeeCeEEEeeecC-CCCCCe-EEeecCCeEEEecceeccCCcceEEeeeC-----------CccEEEecceeecCCeeee
Q 041616 44 YRKHMNITLHKLR-KIDRDA-IRLVIALKVWIDHNTLYKCQNGLIDVTRG-----------STDVTISNNWFRNQDKIKL 110 (202)
Q Consensus 44 F~~~g~I~l~~I~-~~~~Da-i~i~~~~nVwIDHctfs~~~Dg~id~~~~-----------s~~VTiS~n~f~~h~k~~l 110 (202)
...+++|+...|. ..++++ +...+++||.|..|.|.. +-.+.++.+ ..+||+++|.|.+-..+..
T Consensus 173 ~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~ 250 (464)
T 1h80_A 173 WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVM 250 (464)
T ss_dssp EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEE
T ss_pred eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEE
Confidence 5555555544453 233556 556679999999999887 333444322 5799999999999888888
Q ss_pred eCCCCCccCCCceeEEEEceEe
Q 041616 111 LGHDDGYIRDKNMKMTIAYNHF 132 (202)
Q Consensus 111 iG~~d~~~~d~~~~vT~hhN~f 132 (202)
|+.... .-.+|+|-+-..
T Consensus 251 I~p~~~----~isnItfeNI~~ 268 (464)
T 1h80_A 251 FGPHFM----KNGDVQVTNVSS 268 (464)
T ss_dssp EECTTC----BCCCEEEEEEEE
T ss_pred EeCCCc----eEeEEEEEEEEE
Confidence 873321 124688766555
No 52
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=82.44 E-value=5.1 Score=36.17 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=93.6
Q ss_pred CCCCCCCc---EEEEEEcCCCCCCCCCCCCchhhhhhh-------CCCceEEEEeeCeEEEee-----------------
Q 041616 1 MTNNVGKD---VVRYKVTDPGDDTINPKPGTLRYEAIL-------IPQKVWTTYRKHMNITLH----------------- 53 (202)
Q Consensus 1 ~tGGrgG~---v~~y~VT~l~D~~~~p~~GsLR~av~~-------~~~p~~IvF~~~g~I~l~----------------- 53 (202)
.|||++|+ | |+||+++| ||+|+.+ .++||+|+ ++|+|.+.
T Consensus 21 TTGG~~a~~~~v--~tVtt~ae---------L~~al~~~~~~~~~~~~priI~--V~GtId~~~~~~g~~~~c~~~~~~~ 87 (416)
T 1vbl_A 21 TTGGAMASPQNV--FVVTNRTE---------LIQALGGNNHTNQYNSVPKIIY--VKGTIDLNVDDNNQPVGPDFYKDPH 87 (416)
T ss_dssp CCTTTTCCGGGE--EEECSHHH---------HHHHTTSCTTGGGGCCSCEEEE--ECSEEESSBCTTSCBCCHHHHCCTT
T ss_pred CcCCCCCccccE--EEeCCHHH---------HHHHHhccccccccCCCCEEEE--ECCEEecccCCCCccccccccccCC
Confidence 58999995 9 99999987 9999986 14899998 78899863
Q ss_pred ---------------------------------------ec---------CC-----CCCCeEEeecCCeEEEecceecc
Q 041616 54 ---------------------------------------KL---------RK-----IDRDAIRLVIALKVWIDHNTLYK 80 (202)
Q Consensus 54 ---------------------------------------~I---------~~-----~~~Dai~i~~~~nVwIDHctfs~ 80 (202)
.| .. -.+-+|.|.+++||+|-+..|..
T Consensus 88 ~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~~~NVIIrNl~i~~ 167 (416)
T 1vbl_A 88 FDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGGFLIKNVDNVIIRNIEFEA 167 (416)
T ss_dssp CCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCEEEEESCEEEEEESCEEEC
T ss_pred cchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCEEEeecCceEEEeCeEEEc
Confidence 11 11 01346778889999999999975
Q ss_pred CCc-------------------ceEEeeeCCccEEEecceeecCC-----eeeeeCC----CCCcc--CCCceeEEEEce
Q 041616 81 CQN-------------------GLIDVTRGSTDVTISNNWFRNQD-----KIKLLGH----DDGYI--RDKNMKMTIAYN 130 (202)
Q Consensus 81 ~~D-------------------g~id~~~~s~~VTiS~n~f~~h~-----k~~liG~----~d~~~--~d~~~~vT~hhN 130 (202)
..| ..|.+ .++++|=|-.|.|+... ....+|. .|+.. ..+...||+-+|
T Consensus 168 ~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn 246 (416)
T 1vbl_A 168 PLDYFPEWDPTDGTLGEWNSEYDSISI-EGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYN 246 (416)
T ss_dssp CCCSSCEEETTSTTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESC
T ss_pred CccccccccccccccccccCCCceEEe-cCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEee
Confidence 432 23555 46778888888877421 1123332 12211 113468999999
Q ss_pred EecCCCCCCCCccc--------CC--eEEEECceEECcc
Q 041616 131 HFGRNCNQRMPRVR--------HG--FAHVINNLYRKWT 159 (202)
Q Consensus 131 ~f~~~~~~R~Pr~r--------~G--~~hv~NN~~~n~~ 159 (202)
+| .+.. ..=++. .| ++=+.+|+|.+..
T Consensus 247 ~f-~~h~-k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~ 283 (416)
T 1vbl_A 247 VF-TNHD-KVTLIGASDSRMADSGHLRVTLHHNYYKNVT 283 (416)
T ss_dssp EE-EEEE-ECCEECSCTTCGGGTTCCCEEEESCEEEEEE
T ss_pred EE-cCCC-ceeEeCCCCCCcccCCceEEEEECcEecCCc
Confidence 99 4332 222221 12 5888999998754
No 53
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=81.50 E-value=1.3 Score=41.61 Aligned_cols=82 Identities=4% Similarity=-0.049 Sum_probs=59.3
Q ss_pred CceEEEEe------eCeEEEeeec--CCCCCCeEEeecCCeE--EEecceecc----CCcceEEeeeCCccEEEecceee
Q 041616 38 QKVWTTYR------KHMNITLHKL--RKIDRDAIRLVIALKV--WIDHNTLYK----CQNGLIDVTRGSTDVTISNNWFR 103 (202)
Q Consensus 38 ~p~~IvF~------~~g~I~l~~I--~~~~~Dai~i~~~~nV--wIDHctfs~----~~Dg~id~~~~s~~VTiS~n~f~ 103 (202)
.|+.|.|. .+-.|.+.+| ...+.-.|.+..++|| .|+.++... ..|| +|+. ++|+|++|.|.
T Consensus 317 rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDG-IDi~---~NV~I~nc~I~ 392 (574)
T 1ogo_X 317 DSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDG-PEIY---PNSVVHDVFWH 392 (574)
T ss_dssp TTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCC-CBCC---TTCEEEEEEEE
T ss_pred CcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCcc-Cccc---CCEEEEeeEEE
Confidence 35555554 5555555555 5667778999999999 999998642 3666 6764 89999999999
Q ss_pred cCCeeeeeCCCCCccCCCceeEEEEceEe
Q 041616 104 NQDKIKLLGHDDGYIRDKNMKMTIAYNHF 132 (202)
Q Consensus 104 ~h~k~~liG~~d~~~~d~~~~vT~hhN~f 132 (202)
..+-+.-|++ .+|++-++.+
T Consensus 393 ~gDDcIaIks---------~NI~I~nc~i 412 (574)
T 1ogo_X 393 VNDDAIKIYY---------SGASVSRATI 412 (574)
T ss_dssp ESSCSEECCS---------TTCEEEEEEE
T ss_pred CCCCEEEECC---------ccEEEEeEEE
Confidence 8877877775 2466666665
No 54
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=80.66 E-value=8.2 Score=33.96 Aligned_cols=138 Identities=10% Similarity=-0.030 Sum_probs=86.2
Q ss_pred CcEEEEEEcCCCCCCCCCCCCchhhhhhhC----------CCceEEEEeeCeEEEee-----------------------
Q 041616 7 KDVVRYKVTDPGDDTINPKPGTLRYEAILI----------PQKVWTTYRKHMNITLH----------------------- 53 (202)
Q Consensus 7 G~v~~y~VT~l~D~~~~p~~GsLR~av~~~----------~~p~~IvF~~~g~I~l~----------------------- 53 (202)
..| |+||+++ +|++|++++ .+++.+||.++|+|.|.
T Consensus 18 ~~~--~tvtt~~---------~L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~~~~~~~~~~~~~~i~~ 86 (353)
T 1air_A 18 AVS--KTATSMQ---------DIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKE 86 (353)
T ss_dssp CEE--EEESSHH---------HHHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTSGGGSTTSCCCEEEEES
T ss_pred cce--EEeCCHH---------HHHHHHHhhccccccccccCCCceEEEEEccEEeccccccccccccccccCCCceEEEe
Confidence 356 8898876 799999763 25667778888887651
Q ss_pred ---e--c--C--CCCCCeEEeecCCeEEEecceeccC------CcceEEeeeCCccEEEecceeecCCe-ee--eeCC--
Q 041616 54 ---K--L--R--KIDRDAIRLVIALKVWIDHNTLYKC------QNGLIDVTRGSTDVTISNNWFRNQDK-IK--LLGH-- 113 (202)
Q Consensus 54 ---~--I--~--~~~~Dai~i~~~~nVwIDHctfs~~------~Dg~id~~~~s~~VTiS~n~f~~h~k-~~--liG~-- 113 (202)
+ | + ...+-+|.|.+++||+|-+..|... .|. |.+. ++++|=|-.|.|..... ++ .-+.
T Consensus 87 ~~sn~TI~G~~~~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~Da-I~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~ 164 (353)
T 1air_A 87 FTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDM-IRVD-DSPNVWVDHNELFAANHECDGTPDNDTT 164 (353)
T ss_dssp BCSCEEEEECTTCCBSSEEEEESCCSEEEESCEEESCSCGGGTCCS-EEEE-SCCSEEEESCEEECCSCCCTTCGGGCCS
T ss_pred cCCCEEEEeccCCCCCceEEEeccCcEEEeccEEEeCCCCCCCCCe-EEee-CCCcEEEEeeEEecCCcccccccccccc
Confidence 1 1 1 1124478888999999999999843 344 5664 68899999998874311 10 0010
Q ss_pred CCCcc--CCCceeEEEEceEecCCCCCCCCcccC------CeEEEECceEECcc
Q 041616 114 DDGYI--RDKNMKMTIAYNHFGRNCNQRMPRVRH------GFAHVINNLYRKWT 159 (202)
Q Consensus 114 ~d~~~--~d~~~~vT~hhN~f~~~~~~R~Pr~r~------G~~hv~NN~~~n~~ 159 (202)
.|+.. ..+..+||+-+|+| .+... .=++.. -++-+.+|+|.+..
T Consensus 165 ~DGl~di~~~s~~VTISnn~f-~~h~k-~~LiG~sd~~~g~~vT~hhN~f~~~~ 216 (353)
T 1air_A 165 FESAVDIKGASNTVTVSYNYI-HGVKK-VGLDGSSSSDTGRNITYHHNYYNDVN 216 (353)
T ss_dssp SCCSEEEESSCCEEEEESCEE-EEEEE-CCEESSSTTCCCCEEEEESCEEEEEE
T ss_pred cccceeeecccCcEEEEeeEE-cCCCc-eeEECCCcCCCCceEEEEceEEcCCc
Confidence 11110 01246899999999 43321 111111 25888999998754
No 55
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=76.28 E-value=14 Score=33.45 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=49.4
Q ss_pred CCCCCeEEeecCCeEEEecceec-cCCcceEEeeeCCccEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCC
Q 041616 57 KIDRDAIRLVIALKVWIDHNTLY-KCQNGLIDVTRGSTDVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRN 135 (202)
Q Consensus 57 ~~~~Dai~i~~~~nVwIDHctfs-~~~Dg~id~~~~s~~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~ 135 (202)
..+|++|.++.+++.-|.++.+. .+.|+..-. .+++.+|+.|.|++...++.+=.+.. .+.++..|.| .+
T Consensus 228 ~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~m--~s~~~~i~~N~f~~~~~Gi~~M~s~~------~~n~v~~N~f-~~ 298 (410)
T 2inu_A 228 GPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFT--GCNRCSVTSNRLQGFYPGMLRLLNGC------KENLITANHI-RR 298 (410)
T ss_dssp CTTSEEEEEESEESCEEESCEECSCSSEEEEEE--SCBSCEEESCEEEESSSCSEEEESSC------BSCEEESCEE-EE
T ss_pred cCCCCEEEEEeCCCCEEECCCcccCcceEEEEE--ccCCCEEECCEEecceeEEEEEEcCC------CCCEEECCEE-ec
Confidence 34456688889888888898664 477776654 47888999999987766654322210 2468888999 44
Q ss_pred CC
Q 041616 136 CN 137 (202)
Q Consensus 136 ~~ 137 (202)
+.
T Consensus 299 ~~ 300 (410)
T 2inu_A 299 TN 300 (410)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 56
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=75.50 E-value=9.8 Score=34.07 Aligned_cols=141 Identities=16% Similarity=0.216 Sum_probs=91.8
Q ss_pred CCCCCCCc---EEEEEEcCCCCCCCCCCCCchhhhh---hhCCCceEEEEeeCeEEEee---------------------
Q 041616 1 MTNNVGKD---VVRYKVTDPGDDTINPKPGTLRYEA---ILIPQKVWTTYRKHMNITLH--------------------- 53 (202)
Q Consensus 1 ~tGGrgG~---v~~y~VT~l~D~~~~p~~GsLR~av---~~~~~p~~IvF~~~g~I~l~--------------------- 53 (202)
.|||++|+ | |+||+++| ||+|+ .. ++||+|+ ++|+|.+.
T Consensus 21 TTGG~~a~~~~v--~tVtt~ae---------L~~al~~~~~-~~priI~--v~GtId~~~~~~g~~~~c~~~~~~~~~~~ 86 (399)
T 2o04_A 21 TTGGSKASSSNV--YTVSNRNQ---------LVSALGKETN-TTPKIIY--IKGTIDMNVDDNLKPLGLNDYKDPEYDLD 86 (399)
T ss_dssp CCTTTTCCGGGE--EEECSHHH---------HHHHHCCTTC-CSCEEEE--ECSEEESSBCTTCCBCCHHHHCCTTCCHH
T ss_pred CcCCCCCccceE--EEeCCHHH---------HHHHHHhccC-CCCEEEE--EcCEEecccCCccccccccccccCCcchh
Confidence 58999997 9 99999987 99999 66 8999998 78888763
Q ss_pred -----------------------------------ec---------CC-----CCCCeEEeecCCeEEEecceeccCCc-
Q 041616 54 -----------------------------------KL---------RK-----IDRDAIRLVIALKVWIDHNTLYKCQN- 83 (202)
Q Consensus 54 -----------------------------------~I---------~~-----~~~Dai~i~~~~nVwIDHctfs~~~D- 83 (202)
.| .. -.+-+|.|.. +||+|-+..|....|
T Consensus 87 ~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~-~NVIIrnl~i~~~~~~ 165 (399)
T 2o04_A 87 KYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKS-DNVIIRNIEFQDAYDY 165 (399)
T ss_dssp HHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCEEEECS-EEEEEESCEEECCCCS
T ss_pred hhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCEEEeeC-CCEEEeCeEEecCccc
Confidence 11 11 0133566667 999999999975432
Q ss_pred ------------------ceEEeeeCCccEEEecceeecC-----CeeeeeCCC----CCcc--CCCceeEEEEceEecC
Q 041616 84 ------------------GLIDVTRGSTDVTISNNWFRNQ-----DKIKLLGHD----DGYI--RDKNMKMTIAYNHFGR 134 (202)
Q Consensus 84 ------------------g~id~~~~s~~VTiS~n~f~~h-----~k~~liG~~----d~~~--~d~~~~vT~hhN~f~~ 134 (202)
..|.+ .++++|=|-.|.|+.. .....+|.. |+.. ..+...||+-+|+| .
T Consensus 166 ~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f-~ 243 (399)
T 2o04_A 166 FPQWDPTDGSSGNWNSQYDNITI-NGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYY-H 243 (399)
T ss_dssp SCEEETTSSTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEE-E
T ss_pred cccccccccccccccCCCCeEEe-cCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEE-c
Confidence 23555 4577777777777632 112233331 2211 11346899999999 4
Q ss_pred CCCCCCCccc--------CC--eEEEECceEECcc
Q 041616 135 NCNQRMPRVR--------HG--FAHVINNLYRKWT 159 (202)
Q Consensus 135 ~~~~R~Pr~r--------~G--~~hv~NN~~~n~~ 159 (202)
+.. ..=++. .| .+=+.+|+|.+..
T Consensus 244 ~h~-k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~ 277 (399)
T 2o04_A 244 DHD-KSSIFGSSDSKTSDDGKLKITLHHNRYKNIV 277 (399)
T ss_dssp EEE-ECCEESCCTTCGGGTTCCCEEEESCEEEEEE
T ss_pred CCC-ceeEeCCCCCCccccCceeEEEECcEecCCc
Confidence 332 222222 12 6888999998754
No 57
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=74.60 E-value=13 Score=33.09 Aligned_cols=21 Identities=5% Similarity=0.052 Sum_probs=12.2
Q ss_pred CCeEEeecC-CeEEEecceecc
Q 041616 60 RDAIRLVIA-LKVWIDHNTLYK 80 (202)
Q Consensus 60 ~Dai~i~~~-~nVwIDHctfs~ 80 (202)
..+|.+.+. ++..|.+|++..
T Consensus 151 ~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 151 NTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp SCSEEECTTCCSCEEESCEEEC
T ss_pred ceeEEEEcccCCeEEEceEEEc
Confidence 336777653 356666666653
No 58
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=72.70 E-value=12 Score=33.00 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=57.1
Q ss_pred eEEe---ecCCeEEEecceeccCCc---------------ceEEeeeCCccEEEecceeecC-----CeeeeeCCC----
Q 041616 62 AIRL---VIALKVWIDHNTLYKCQN---------------GLIDVTRGSTDVTISNNWFRNQ-----DKIKLLGHD---- 114 (202)
Q Consensus 62 ai~i---~~~~nVwIDHctfs~~~D---------------g~id~~~~s~~VTiS~n~f~~h-----~k~~liG~~---- 114 (202)
+|.| .+++||+|-+..|....| ..|.+..++++|=|-.|.|+.. .....+|..
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 5667 578999999999986432 1455543377777777777642 112233432
Q ss_pred CCcc--CCCceeEEEEceEecCCCCCCCCccc---------CC--eEEEECceEECcc
Q 041616 115 DGYI--RDKNMKMTIAYNHFGRNCNQRMPRVR---------HG--FAHVINNLYRKWT 159 (202)
Q Consensus 115 d~~~--~d~~~~vT~hhN~f~~~~~~R~Pr~r---------~G--~~hv~NN~~~n~~ 159 (202)
|+.. ..+...||+-+|+| .+.. ..=++. .| ++=+.+|+|.+..
T Consensus 184 DgllDi~~~s~~VTiS~n~f-~~h~-k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 239 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLI-DQHD-KTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVT 239 (361)
T ss_dssp CCSEEECTTCEEEEEESCEE-EEEE-ECEEESCCTTCHHHHTTCCEEEEESCEEEEEE
T ss_pred cceeeeecCCCcEEEEeeEE-cCCC-ceeEecCCCCCcccccCcceEEEECeEEcCcc
Confidence 2211 12346899999999 4432 111111 12 5888899998754
No 59
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=66.98 E-value=7.9 Score=34.52 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=37.2
Q ss_pred CCCCCCeEEeecCCeEEEecceeccCCcceEEeeeCCccEEEecceeec
Q 041616 56 RKIDRDAIRLVIALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRN 104 (202)
Q Consensus 56 ~~~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~ 104 (202)
...+..+|.+++ +++.|++|.|....+.-|.+...+.+.+|.+|.+.+
T Consensus 125 ~n~g~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 125 TRAGYQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp ESCSSCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEEC
T ss_pred EeCCCCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEc
Confidence 345556899887 677899999999988667776655688899998864
No 60
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=61.36 E-value=19 Score=32.47 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=61.7
Q ss_pred eEEeec-CCeEEEecceeccCCcceEEeeeCCccEEEecceeecCC-eeeeeCCCCC------c--cCCCc--eeE-EEE
Q 041616 62 AIRLVI-ALKVWIDHNTLYKCQNGLIDVTRGSTDVTISNNWFRNQD-KIKLLGHDDG------Y--IRDKN--MKM-TIA 128 (202)
Q Consensus 62 ai~i~~-~~nVwIDHctfs~~~Dg~id~~~~s~~VTiS~n~f~~h~-k~~liG~~d~------~--~~d~~--~~v-T~h 128 (202)
||.++. ++++.|.+|.|....=|.. + +++++++|.+|.+.+-. --.|+|.++. . ..+.+ .++ ..+
T Consensus 163 GI~v~~~~d~~~I~nn~i~~~~fGI~-l-~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~ 240 (410)
T 2inu_A 163 GIEVASDNDSFHITGMGFVYLEHALI-V-RGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHE 240 (410)
T ss_dssp EEEECSCEESCEEESCEEESCSEEEE-E-TTEESCEEESCEEESSSEEEEECSCEESCEEESCEEECCTTSEEEEEESEE
T ss_pred eEEEeccCCeEEEECCEEecccEEEE-E-ccCCCcEEECCEEEecCCceeeccccccceEecceeeecCCCCEEEEEeCC
Confidence 466664 5667777777766544432 2 45777888888887422 2234552211 0 11112 222 234
Q ss_pred ceEecCCCCCCCCcccCC-------eEEEECceEECc-cceEEcccc--cccccCcceEecCCcch
Q 041616 129 YNHFGRNCNQRMPRVRHG-------FAHVINNLYRKW-TQYTIGKAN--LKYTEEQKCQVANAKSM 184 (202)
Q Consensus 129 hN~f~~~~~~R~Pr~r~G-------~~hv~NN~~~n~-~~yaig~~~--~~y~~~~~f~~~~~s~v 184 (202)
++++ .++ ...|+.|.| ...+.+|.|.+. ..+.+--+. ....+.|.|.-.-..+.
T Consensus 241 ~~~I-~~N-~i~~~~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~s~~~~n~v~~N~f~~~~~g~a 304 (410)
T 2inu_A 241 GLLV-TGN-NLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLNGCKENLITANHIRRTNEGYP 304 (410)
T ss_dssp SCEE-ESC-EECSCSSEEEEEESCBSCEEESCEEEESSSCSEEEESSCBSCEEESCEEEEECCCSG
T ss_pred CCEE-ECC-CcccCcceEEEEEccCCCEEECCEEecceeEEEEEEcCCCCCEEECCEEeccCCcee
Confidence 4444 221 123666654 235667777653 233333333 67778888876655443
No 61
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=45.42 E-value=58 Score=30.76 Aligned_cols=37 Identities=11% Similarity=-0.049 Sum_probs=24.0
Q ss_pred ceEEEEeeCeEEEeeecCCC-CCCeEEe---ecCCeEEEecce
Q 041616 39 KVWTTYRKHMNITLHKLRKI-DRDAIRL---VIALKVWIDHNT 77 (202)
Q Consensus 39 p~~IvF~~~g~I~l~~I~~~-~~Dai~i---~~~~nVwIDHct 77 (202)
|+ |.|..+- |+...|... +.-.|.+ ..++||.|++|+
T Consensus 178 P~-l~f~~c~-I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvt 218 (600)
T 2x6w_A 178 AF-GRSYNCS-VTGITFQNGDVTWAITLGWNGYGSNCYVRKCR 218 (600)
T ss_dssp EC-CSEEEEE-EESCEEESCCCSCSEEECBTTBEEEEEEESCE
T ss_pred CE-EEEeeeE-EeCeEEECCCCccEEEeCCCCCcccEEEeCeE
Confidence 55 5454443 553344556 6667788 778888888888
No 62
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=34.64 E-value=27 Score=33.08 Aligned_cols=85 Identities=9% Similarity=-0.053 Sum_probs=49.8
Q ss_pred CCCCeEEeecCCeEEEecceeccCCcceEEe-eeCCc-cEEEecceeecCCeeeeeCCCCCccCCCceeEEEEceEecCC
Q 041616 58 IDRDAIRLVIALKVWIDHNTLYKCQNGLIDV-TRGST-DVTISNNWFRNQDKIKLLGHDDGYIRDKNMKMTIAYNHFGRN 135 (202)
Q Consensus 58 ~~~Dai~i~~~~nVwIDHctfs~~~Dg~id~-~~~s~-~VTiS~n~f~~h~k~~liG~~d~~~~d~~~~vT~hhN~f~~~ 135 (202)
...||| |+|.+|.|.. .|..+.+ +.++. +++++ .+....-+.-||+... ..-.+|++.+ .+ ..
T Consensus 227 pNTDGI-------V~I~nc~I~t-GDDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~---ggV~NV~V~N-rI-Kt 291 (600)
T 2x6w_A 227 VNADHS-------TVYVNCPYSG-VESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVN---GYCRGAYVVM-HA-AE 291 (600)
T ss_dssp SCCCEE-------EEEECSSSEE-EESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEE---EESEEEEEEE-CG-GG
T ss_pred CCCCEE-------EEEEeeEEec-CCcEEEEecCCCcCCeEEE--EEcCCCCcEEeccccc---CcEEEEEEEE-EE-Ee
Confidence 347888 9999999975 5888888 87764 36666 3332223566776321 1235677777 66 44
Q ss_pred CCCCCCcccCCeEEEECceEECcc
Q 041616 136 CNQRMPRVRHGFAHVINNLYRKWT 159 (202)
Q Consensus 136 ~~~R~Pr~r~G~~hv~NN~~~n~~ 159 (202)
...|.+.++ .+++-|....+..
T Consensus 292 ~~G~GG~V~--NItfeNI~m~nV~ 313 (600)
T 2x6w_A 292 AAGAGSYAY--NMQVENNIAVIYG 313 (600)
T ss_dssp CTTTCSEEE--EEEEESCEEEESS
T ss_pred ecCCCceEE--EEEEEEEEEEccc
Confidence 444333222 3555555555543
No 63
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=25.45 E-value=88 Score=28.90 Aligned_cols=53 Identities=9% Similarity=-0.038 Sum_probs=33.1
Q ss_pred ceEEeeeCCccEEEecceeecC-------------------------CeeeeeCCCCCccCCCcee-EEEEceEecCCCC
Q 041616 84 GLIDVTRGSTDVTISNNWFRNQ-------------------------DKIKLLGHDDGYIRDKNMK-MTIAYNHFGRNCN 137 (202)
Q Consensus 84 g~id~~~~s~~VTiS~n~f~~h-------------------------~k~~liG~~d~~~~d~~~~-vT~hhN~f~~~~~ 137 (202)
-.+++.....+|.|++|+|+-. ..+..||+..-. -+-.+ +++|.++| .|++
T Consensus 210 ~gL~f~eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~hgav~igSE~m~--~Gvk~~v~v~~Clf-~~td 286 (514)
T 2vbk_A 210 VGLHFLGQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVRSEAIILDSETMC--IGFKNAVYVHDCLD-LHME 286 (514)
T ss_dssp EEEEEESCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBCCEEEEEESSEEE--ESCSEEEEESCCEE-EEEE
T ss_pred cCccccCCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcccccEEECchhhc--ccccccEEEEeeec-cCCc
Confidence 3566666788999999999711 223445542110 01234 89999999 7887
Q ss_pred CC
Q 041616 138 QR 139 (202)
Q Consensus 138 ~R 139 (202)
+-
T Consensus 287 ~~ 288 (514)
T 2vbk_A 287 QL 288 (514)
T ss_dssp SE
T ss_pred cc
Confidence 74
No 64
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=24.97 E-value=1.5e+02 Score=24.03 Aligned_cols=24 Identities=17% Similarity=0.073 Sum_probs=13.1
Q ss_pred EEeeCeEEEeeecCCCCCCeEEee
Q 041616 43 TYRKHMNITLHKLRKIDRDAIRLV 66 (202)
Q Consensus 43 vF~~~g~I~l~~I~~~~~Dai~i~ 66 (202)
+-+.+.+|++.-|.....|+|...
T Consensus 49 ~le~GaTLkNvIIG~~~~dGIHC~ 72 (196)
T 3t9g_A 49 KLEKGANLKNVIIGAPGCDGIHCY 72 (196)
T ss_dssp EECTTCEEEEEEECSCCTTCEEEC
T ss_pred EEcCCCEEEEEEECCCCcCcEEEc
Confidence 345667776555544445555554
No 65
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=23.45 E-value=3.4e+02 Score=23.04 Aligned_cols=83 Identities=11% Similarity=0.001 Sum_probs=0.0
Q ss_pred CCCCcEEEEEEcCCCCCCCCCCCCchhhhhhhCCCceEEEEeeCeEEEeeec------CCCCCCeEEeecCCeEEEecce
Q 041616 4 NVGKDVVRYKVTDPGDDTINPKPGTLRYEAILIPQKVWTTYRKHMNITLHKL------RKIDRDAIRLVIALKVWIDHNT 77 (202)
Q Consensus 4 GrgG~v~~y~VT~l~D~~~~p~~GsLR~av~~~~~p~~IvF~~~g~I~l~~I------~~~~~Dai~i~~~~nVwIDHct 77 (202)
|+...| +.-.....+ +.+|.+-|... |...+.+++...| .....=||.+ .++++-+.+|.
T Consensus 65 g~~~ti--I~~~~~~~~----g~~t~~satv~-------v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~ 130 (319)
T 1gq8_A 65 GRTSTI--ITASKNVQD----GSTTFNSATVA-------AVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCD 130 (319)
T ss_dssp CTTTEE--EEECCCTTT----TCCTGGGCSEE-------ECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEE
T ss_pred CCCccE--EEecccccC----CCCccceEEEE-------EECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeE
Q ss_pred eccCCcceEEeeeCCccEEEecceee
Q 041616 78 LYKCQNGLIDVTRGSTDVTISNNWFR 103 (202)
Q Consensus 78 fs~~~Dg~id~~~~s~~VTiS~n~f~ 103 (202)
|....|.+.. ......+.+|++.
T Consensus 131 f~g~QDTLy~---~~~r~~~~~c~I~ 153 (319)
T 1gq8_A 131 ILAYQDSLYV---HSNRQFFINCFIA 153 (319)
T ss_dssp EECSTTCEEE---CSSEEEEESCEEE
T ss_pred ECccceeeee---cCccEEEEecEEE
No 66
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=20.03 E-value=2.4e+02 Score=22.81 Aligned_cols=28 Identities=4% Similarity=0.010 Sum_probs=15.3
Q ss_pred ceEEEEeeCeEEEeeecCCCCCCeEEeec
Q 041616 39 KVWTTYRKHMNITLHKLRKIDRDAIRLVI 67 (202)
Q Consensus 39 p~~IvF~~~g~I~l~~I~~~~~Dai~i~~ 67 (202)
|+. +-+.+.+|++.-|...+.|+|...+
T Consensus 42 ~vF-~le~GaTLkNvIIG~~~~dGIHC~G 69 (197)
T 1ee6_A 42 PIF-RLEAGASLKNVVIGAPAADGVHCYG 69 (197)
T ss_dssp CSE-EECTTEEEEEEEECSSCTTCEEEES
T ss_pred cEE-EecCCCEEEEEEEcCCCcccEEEcC
Confidence 444 3456777776555444555555543
Done!