BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041619
(222 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 148/216 (68%), Gaps = 16/216 (7%)
Query: 1 MGCVCMKQRLKSVNHAA-------LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEE 53
MGC K++ K+ LA+ T F E+E +DDG+I KEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 54 FQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLF 113
FQL LF+N +++L ADR+F +FD+KR+G IEF EFVRSL +FHP AP EKV FAF+L+
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 114 DVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGK 173
D+ QTGFIEREE +KEM++ALL ES+L+LS+D+IE +++KAF AD K DGK
Sbjct: 121 DLRQTGFIEREE---------LKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGK 171
Query: 174 IDPEEWKEFVARNPSLLKNMTIPYLKDITTAFPSFV 209
ID +EWK+FV+ NPSL+KNMT+PYLKDI FPSFV
Sbjct: 172 IDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFPSFV 207
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 148/216 (68%), Gaps = 16/216 (7%)
Query: 1 MGCVCMKQRLKSVNHAA-------LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEE 53
MGC K++ K+ LA+ T F E+E +DDG+I KEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 54 FQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLF 113
FQL LF+N +++L ADR+F +FD+KR+G IEF EFVRSL +FHP AP EKV FAF+L+
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 114 DVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGK 173
D+ QTGFIEREE +KEM++ALL ES+L+LS+D+IE +++KAF AD K DGK
Sbjct: 121 DLRQTGFIEREE---------LKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGK 171
Query: 174 IDPEEWKEFVARNPSLLKNMTIPYLKDITTAFPSFV 209
ID +EWK+FV+ NPSL+KNMT+PYLKDI FPSFV
Sbjct: 172 IDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFPSFV 207
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 137/199 (68%), Gaps = 9/199 (4%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFD 77
LA T F +EIE +DDG+I+KEEFQL LFK +KK+SL ADRVF LFD
Sbjct: 36 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 95
Query: 78 LKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
K +G + FEEF R+LS+FHP AP +K+ F+FQL+D+ Q GFIER+E VK+
Sbjct: 96 TKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQE---------VKQ 146
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPY 197
M++A L ES + L D +IE II+K FE+AD K DGKID EEW+ V R+PSLLKNMT+ Y
Sbjct: 147 MVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQY 206
Query: 198 LKDITTAFPSFVLRPDIED 216
LKDITT FPSFV +ED
Sbjct: 207 LKDITTTFPSFVFHSQVED 225
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 134/194 (69%), Gaps = 9/194 (4%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFD 77
LA T F +EIE +DDG+I+KEEFQL LFK +KK+SL ADRVF LFD
Sbjct: 5 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 64
Query: 78 LKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
K +G + FEEF R+LS+FHP AP +K+ F+FQL+D+ Q GFIER+E VK+
Sbjct: 65 TKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQE---------VKQ 115
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPY 197
M++A L ES + L D +IE II+K FE+AD K DGKID EEW+ V R+PSLLKNMT+ Y
Sbjct: 116 MVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQY 175
Query: 198 LKDITTAFPSFVLR 211
LKDITT FPSFV
Sbjct: 176 LKDITTTFPSFVFH 189
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQ--LGLFKNHKKQSLIADRVFQL 75
L AQT+F + E+++ G++++E F+ F H S A +F
Sbjct: 42 LEAQTNFTKRELQVLYRGFKNE----CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNA 97
Query: 76 FDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLV 135
FD + G ++FE+FV +LSI H EK+ + F L+D+++ G+I +EE+ + V
Sbjct: 98 FDTTQTGSVKFEDFVTALSILLRGTVH-EKLRWTFNLYDINKDGYINKEEMMDI-----V 151
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
K + + K + +L +D ++ F+ D DG + +E+ E + ++++++ +
Sbjct: 152 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 211
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILA 141
G + E F + + F P + + F FD +QTG ++ E+ L++L++ +
Sbjct: 67 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV-TALSILLRGTVHE 125
Query: 142 LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKDI 201
L+ + F D DG I+ EE + V ++ T P LK+
Sbjct: 126 KLRWT----------------FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 169
Query: 202 T 202
T
Sbjct: 170 T 170
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQ--LGLFKNHKKQSLIADRVFQL 75
L AQT+F + E+++ G+++++ F+ F H S A +F
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNE----CPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 76 FDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLV 135
FD + G ++FE+FV +LSI H EK+ + F L+D+++ G+I +EE+ + V
Sbjct: 62 FDTTQTGSVKFEDFVTALSILLRGTVH-EKLRWTFNLYDINKDGYINKEEMMDI-----V 115
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
K + + K + +L +D ++ F+ D DG + +E+ E + ++++++ +
Sbjct: 116 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILA 141
G + + F + + F P + + F FD +QTG ++ E+ L++L++ +
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV-TALSILLRGTVHE 89
Query: 142 LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKDI 201
L+ + F D DG I+ EE + V ++ T P LK+
Sbjct: 90 KLRWT----------------FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 133
Query: 202 T 202
T
Sbjct: 134 T 134
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQ--LGLFKNHKKQSLIADRVFQL 75
L AQT+F + E+++ G++++E F+ F H S A +F
Sbjct: 9 LEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYLFNA 64
Query: 76 FDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLV 135
FD + G ++FE+FV +LSI H EK+ + F L+D+++ G+I +EE+ + V
Sbjct: 65 FDTTQTGSVKFEDFVTALSILLRGTVH-EKLRWTFNLYDINKDGYINKEEMMDI-----V 118
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
K + + K + +L +D ++ F+ D DG + +E+ E + ++++++ +
Sbjct: 119 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQL 178
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILA 141
G + E F + + F P + + F FD +QTG ++ E+ L++L++ +
Sbjct: 34 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV-TALSILLRGTVHE 92
Query: 142 LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKDI 201
L+ + F D DG I+ EE + V ++ T P LK+
Sbjct: 93 KLRWT----------------FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 136
Query: 202 T 202
T
Sbjct: 137 T 137
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G ++K EFQ F S A+ VF +FD ++G I+F+EF+ +LS+ +
Sbjct: 41 GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSV-TSRGELND 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFE 164
K+ +AFQL+D+ G I +E+ ++ + +M+ +++K L +D E +NK F
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIVDAIY--KMVGSMVK---LPEDEDTPEKRVNKIFN 154
Query: 165 DADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
D DG++ EE+ E R+P+++ +++
Sbjct: 155 MMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQ--LGLFKNHKKQSLIADRVFQL 75
L AQT+F + E+++ G+++++ F+ F H S A +F
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNE----CPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 76 FDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLV 135
FD + G ++FE+FV +LSI H EK+ + F L+D+++ G+I +EE+ ++ +
Sbjct: 62 FDTTQTGSVKFEDFVTALSILLRGTVH-EKLRWTFNLYDINKDGYINKEEMMDIVKA--I 118
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
+M+ A +L++D ++ F+ D DG + +E+ E + ++++++ +
Sbjct: 119 YDMMGAYTYP---VLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 64 KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIER 123
+Q+ + RV +FD +G ++F+EF+ +S F + +K+ FAF+++D+ + G+I
Sbjct: 50 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 109
Query: 124 EEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
E L ++K M+ LK++ L + I++K +AD GDG+I EE+ V
Sbjct: 110 GE-----LFQVLKMMVGNNLKDTQL-------QQIVDKTIINADKDGDGRISFEEFCAVV 157
Query: 184 A 184
Sbjct: 158 G 158
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 64 KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIER 123
+Q+ + RV +FD +G ++F+EF+ +S F + +K+ FAF+++D+ + G+I
Sbjct: 36 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 95
Query: 124 EEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
E L ++K M+ LK++ L + I++K +AD GDG+I EE+ V
Sbjct: 96 GE-----LFQVLKMMVGNNLKDTQL-------QQIVDKTIINADKDGDGRISFEEFCAVV 143
Query: 184 A 184
Sbjct: 144 G 144
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 64 KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIER 123
+Q+ + RV +FD +G ++F+EF+ +S F + +K+ FAF+++D+ + G+I
Sbjct: 49 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 108
Query: 124 EEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
E L ++K M+ LK++ L + I++K +AD GDG+I EE+ V
Sbjct: 109 GE-----LFQVLKMMVGNNLKDTQL-------QQIVDKTIINADKDGDGRISFEEFCAVV 156
Query: 184 A 184
Sbjct: 157 G 157
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 64 KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIER 123
+Q+ + RV +FD +G ++F+EF+ +S F + +K+ FAF+++D+ + G+I
Sbjct: 35 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 94
Query: 124 EEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
E L ++K M+ LK++ L + I++K +AD GDG+I EE+ V
Sbjct: 95 GE-----LFQVLKMMVGNNLKDTQL-------QQIVDKTIINADKDGDGRISFEEFCAVV 142
Query: 184 A 184
Sbjct: 143 G 143
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G +S EEF+ G F + S A+ VF+ FD DG I+F EF+ +LS+ +
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFE 164
K+ +AF ++D+ G+I + E+ ++ + +M+ +++K + + E K F
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIY--KMVSSVMK---MPEDESTPEKRTEKIFR 154
Query: 165 DADFKGDGKIDPEEWKEFVARNPSLLK 191
D DGK+ EE+ +PS+++
Sbjct: 155 QMDTNRDGKLSLEEFIRGAKSDPSIVR 181
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 72 VFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVIL 131
VF +FD +DG IEF EF+++LS+ EK+ +AF+L+D+ G+I R E+ ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV- 125
Query: 132 TLLVKEMILALLKES-DLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLL 190
+ I ++ + +L ++ E +++ F D DGK+ +E++E +PS++
Sbjct: 126 -----DAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIV 180
Query: 191 KNMTI 195
+ +++
Sbjct: 181 QALSL 185
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 18 LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQ--LGLFKNHKKQSLIADRVFQL 75
L AQ+ F + E++I G++++E F+ F + A +F
Sbjct: 55 LEAQSKFTKKELQILYRGFKNE----CPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNA 110
Query: 76 FDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLV 135
FD +G + FE+F++ LSI EK+++AF L+D+++ G+I +EE+ ++
Sbjct: 111 FDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIM----- 164
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
K + + K + +L +D + F+ D DG + +E+ E ++ +++++M +
Sbjct: 165 KAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 224
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 19/120 (15%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREE-VKGVILTLLVKEMIL 140
G + E F S F P+ F F FD G + E+ +KG L++L++
Sbjct: 80 GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKG--LSILLR---- 133
Query: 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKD 200
++ +N AF D DG I EE + + ++ T P LK+
Sbjct: 134 ------------GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE 181
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 10 LKSVNHAA-----LAAQTHFKETEIEIXXXXXXXXXXXXVDDGIISKEEFQL--GLFKNH 62
L +V H L AQT F + E++ G++ ++ F+L F
Sbjct: 69 LSTVRHQPEGLDQLQAQTKFTKKELQ----SLYRGFKNECPTGLVDEDTFKLIYSQFFPQ 124
Query: 63 KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIE 122
+ A +F FD +G I FE+FV LSI H EK+ +AF L+D+++ G I
Sbjct: 125 GDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH-EKLKWAFNLYDINKDGCIT 183
Query: 123 REEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182
+EE+ ++ K + + + + IL +D + + F+ D DG + +E+ E
Sbjct: 184 KEEMLAIM-----KSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET 238
Query: 183 VARNPSLLKNMTI 195
++ +++ +M +
Sbjct: 239 CQKDENIMNSMQL 251
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGV 129
+++F+ FD +DG I+F E+V +LS+ + +K+ + F+L+DV G I+R E+ +
Sbjct: 55 EQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 130 ILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSL 189
I + I A+ + ++ + + E N F+ D GDG++ EE+ E V ++ L
Sbjct: 114 I------KAIRAINRCNEAMTA----EEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVL 163
Query: 190 LKNMT 194
L +T
Sbjct: 164 LDILT 168
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKG 128
A+ +F +FD +G I FEEF+ LS EK+S+AF+L+D++ G+I +E+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 129 VILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPS 188
++ ++ + L E + E + K F+ D DG I +E++E +PS
Sbjct: 124 IVASVYKMMGSMVTLNEDEA-----TPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPS 178
Query: 189 LLKNMTI 195
++ + +
Sbjct: 179 IIGALNL 185
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 17/112 (15%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILA 141
G + E+FV+ F P + + F +FD GFI EE V+ T
Sbjct: 41 GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST--------- 91
Query: 142 LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNM 193
S +E ++ AFE D DG I +E VA ++ +M
Sbjct: 92 --------TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSM 135
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G+ + EF+ LGL ++K + D+V+ FD +DG ++F EF+ ++++ E +
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKME-Q 93
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFE 164
K+ + F+L+D G I++ E+ + + + AL + L E IN F
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMA------VQALNGQQTL-----SPEEFINLVFH 142
Query: 165 DADFKGDGKIDPEEWKEFVARNPSLLK 191
D DG++ EE+ +A++ LL+
Sbjct: 143 KIDINNDGELTLEEFINGMAKDQDLLE 169
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 83 GIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILAL 142
+ FE+F+ LS+F A K +AF++FD G + RE++ ++ L
Sbjct: 108 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG------- 160
Query: 143 LKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
+ D LS ++ +I+ E++D DG I+ E++ ++R+P + I
Sbjct: 161 -EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 212
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 83 GIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILAL 142
+ FE+F+ LS+F A K +AF++FD G + RE++ ++ L
Sbjct: 77 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG------- 129
Query: 143 LKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
+ D LS ++ +I+ E++D DG I+ E++ ++R+P + I
Sbjct: 130 -EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 181
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 22/137 (16%)
Query: 46 DGIISKEEFQL---GLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPH 102
DG I+ EE L +N ++ L D + ++ D +G IEF+EF+ ++ +
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEEL-QDMISEV-DADGNGTIEFDEFLSLMAKKVKDTDA 81
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
E++ AF++FD Q G+I E++ V++ L K L+D+ +E +I +A
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRHVMINLGEK-------------LTDEEVEQMIKEA 128
Query: 163 FEDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 129 ----DLDGDGQVNYEEF 141
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+E+V +L + +
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTNQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+E+V +L + +
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTNQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+E+V +L + +
Sbjct: 42 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTNQ 100
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 101 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 130
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+E+V +L + +
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTNQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+++V +L + +
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSA-GKTNQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I+++EFQ F A VF+ FD DG ++F+++V +L + +
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSA-GKTNQ 99
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD Q GFI E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+I+ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADVDGDGQINYEEF 142
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
EK+ +AF L+D+++ G+I +EE+ ++ K + + + + IL +D + + F
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIM-----KSIYDMMGRHTYPILREDAPAEHVERFF 63
Query: 164 EDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195
E D DG + EE+ E ++ +++ +M +
Sbjct: 64 EKMDRNQDGVVTIEEFLEACQKDENIMSSMQL 95
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 72 VFQLFDLKRDGGIEFEEFV------------RSLSIFHPEAPHAEKVSFAFQLFDVSQTG 119
F L+D+ +DG I EE + + I +AP AE V F+ D +Q G
Sbjct: 14 AFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAP-AEHVERFFEKMDRNQDG 72
Query: 120 FIEREE 125
+ EE
Sbjct: 73 VVTIEE 78
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F++FD + G+I+ +E+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLDELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +EW EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEWLEFM 157
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD Q GFI E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+I+ +E+
Sbjct: 117 -------------LTDEEVDEMIRE----ADVDGDGQINYDEF 142
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 43/182 (23%)
Query: 45 DDGIISKEEFQ----LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP-- 98
++G +S+E+FQ L + + + DR+ F + + + F F+R+L+ F P
Sbjct: 42 ENGTLSREDFQRIPELAI-------NPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIE 94
Query: 99 --------EAP-----HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKE 145
P + K+ FAF+L+D+ + I R+E+ L V M++
Sbjct: 95 DNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDEL------LQVLRMMVG---- 144
Query: 146 SDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA--RNPSLLKNMTIPYLKDITT 203
+ +SD+ + +I ++ ++AD GD I + EFV + + M+I +L +
Sbjct: 145 --VNISDEQLGSIADRTIQEADQDGDSAI---SFTEFVKVLEKVDVEQKMSIRFLHKLAA 199
Query: 204 AF 205
A
Sbjct: 200 AL 201
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 47 GIISKEEFQ--LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAE 104
G I++++FQ F A VF+ FD DG ++F+E+V +L +
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHX-TTAGKTNQ 107
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
K+ +AF L+DV G I + EV ++ +
Sbjct: 108 KLEWAFSLYDVDGNGTISKNEVLEIVXAIF 137
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + + E++ AF++FD G+I E++ V+ L K
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 417 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 447
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + EK+ AF++FD GFI E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADVDGDGQVNYEEF 141
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 72 VFQLFDLKRDGGIEFEEFVRSLS-IFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVI 130
+F+ FD D I+F E+V +L+ + H K+ + F+++D + G I+R+E+ ++
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALNLVLRGTLEH--KLKWTFKIYDKDRNGCIDRQELLDIV 121
Query: 131 LTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLL 190
++ + ++ E++ E ++++ F D GDG++ E+ E R+ ++
Sbjct: 122 ESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVM 181
Query: 191 KNMTI 195
K + +
Sbjct: 182 KMLQM 186
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 416 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 446
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 41/158 (25%)
Query: 45 DDGIISKEEFQ----LGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP-- 98
++G +S+E+FQ L + + + DR+ F + + + F F+R+L+ F P
Sbjct: 42 ENGTLSREDFQRIPELAI-------NPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIE 94
Query: 99 --------EAP-----HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKE 145
P + K+ FAF+L+D+ + I R+E+ L V M++
Sbjct: 95 DNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDEL------LQVLRMMVG---- 144
Query: 146 SDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ +SD+ + +I ++ ++AD GD I + EFV
Sbjct: 145 --VNISDEQLGSIADRTIQEADQDGDSAI---SFTEFV 177
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDQMIRE----ADIDGDGQVNYEEF 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I +AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIR----EADIDGDGQVNYEEF 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 60 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 119
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 120 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 58 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 117
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 118 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 143
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 17/82 (20%)
Query: 97 HPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIE 156
H + E++ AF++FD Q G+I E++ V++ L K L+D+ +E
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEK-------------LTDEEVE 48
Query: 157 AIINKAFEDADFKGDGKIDPEE 178
+I ++AD GDG+++ EE
Sbjct: 49 QMI----KEADLDGDGQVNYEE 66
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 114 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 139
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 114 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 139
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 55 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 114
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 115 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 140
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 114 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 139
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 53 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 112
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 113 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 138
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ E++ AF++FD G+I E++ V+ L K
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 417 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ E++ AF++FD G+I E++ V+ L K
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 416 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 446
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK 112
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 113 -------------LTDEEVDEMIRE----ADVDGDGQVNYEEF 138
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 111
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 112 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 137
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADVDGDGQVNYEEF 141
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ E++ AF++FD G+I E++ V+ L K
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 416 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 446
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 62 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 121
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 122 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 19/105 (18%)
Query: 77 DLKRDGG--IEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLL 134
D+ +DG I+FEEF++ ++ E E++ AF+LFD +TG I + +K V
Sbjct: 52 DIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRV----- 106
Query: 135 VKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
KE L +++ + + + ++AD GDG+++ EE+
Sbjct: 107 AKE------------LGENMTDEELQEMIDEADRDGDGEVNEEEF 139
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 28/123 (22%)
Query: 68 IADRVFQLFDLKRDGGIEFEEFVRSLSIFHP--------EAP--------HAEKVSFAFQ 111
+ DR+ + F ++F FVR L+ F P + P K+ +AFQ
Sbjct: 62 LGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121
Query: 112 LFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGD 171
L+D+ + G I R E+ V L L+V + ++++ +E I ++ ++AD GD
Sbjct: 122 LYDLDRDGKISRHEMLQV-LRLMVG-----------VQVTEEQLENIADRTVQEADEDGD 169
Query: 172 GKI 174
G +
Sbjct: 170 GAV 172
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 46 DGIISKEE------FQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSL 93
DG IS+ E +G+ ++ IADR Q D DG + F EF +SL
Sbjct: 128 DGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D DG I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 407
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 408 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 438
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 417
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 418 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 448
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 382
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 383 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 413
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 417 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 447
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 382
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 383 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 413
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 320 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 379
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 380 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 410
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD GFI E++ V+ L K
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + +D GDG+++ EE+
Sbjct: 117 -------------LTDEEVDEMIRE----SDIDGDGQVNYEEF 142
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 417 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 447
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G ++F EF+ ++ + + E++ AF++FD GF+ E++ V+ L K
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
LSD+ ++ +I AD GDG+++ EE+
Sbjct: 116 -------------LSDEEVDEMIRA----ADTDGDGQVNYEEF 141
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F++FD + G+I+ EE+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLEELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +E+ EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F++FD + G+I+ EE+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +E+ EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFM 157
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ E E++ AF++FD G I E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+DD ++ +I + AD GDG I+ EE+
Sbjct: 116 -------------LTDDEVDEMIRE----ADIDGDGHINYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ E E++ AF++FD G I E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+DD ++ +I + AD GDG I+ EE+
Sbjct: 116 -------------LTDDEVDEMIRE----ADIDGDGHINYEEF 141
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ E++ AF++FD G+I E++ V+ L K
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +AD GDG+++ EE+ + +
Sbjct: 417 -------------LTDEEVDEMI----READIDGDGQVNYEEFVQMMT 447
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + A+ GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEMIRE----ANIDGDGQVNYEEF 141
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD Q G+I E++ V++ L K L+D+ +E +I
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEK-------------LTDEEVEQMI---- 46
Query: 164 EDADFKGDGKIDPEEW 179
++AD GDG+++ EE+
Sbjct: 47 KEADLDGDGQVNYEEF 62
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 81 DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMIL 140
+G + F EF ++ E E++ AF++FD GFI E++ V++ L K
Sbjct: 60 NGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEK---- 115
Query: 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
++D+ I+ +I +ADF GDG I+ EE+
Sbjct: 116 ---------VTDEEIDEMIR----EADFDGDGMINYEEF 141
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 113
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 114 ----------GEXLTDEEVDEMIRE----ADIDGDGQVNYEEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 112
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 113 ----------GEXLTDEEVDEMIRE----ADIDGDGQVNYEEF 141
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 27/147 (18%)
Query: 44 VDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFD-LKRDGG--IEFEEF----VRSLSIF 96
+DG IS +E LG Q+ + + ++ D + DG ++F+EF VR +
Sbjct: 31 AEDGCISTKE--LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKD- 87
Query: 97 HPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIE 156
+ E++S F++FD + G+I+ EE+K + L + I DDI E
Sbjct: 88 DSKGKTEEELSDLFRMFDKNADGYIDLEELK------------IMLQATGETITEDDIEE 135
Query: 157 AIINKAFEDADFKGDGKIDPEEWKEFV 183
+ +D D DG+ID +E+ EF+
Sbjct: 136 LM-----KDGDKNNDGRIDYDEFLEFM 157
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 20/86 (23%)
Query: 109 AFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADF 168
AF+LFD +TGFI +E ++ V+ V+ + A N+ F +AD
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVR-----------------VEPAAFNEMFNEADA 53
Query: 169 KGDGKIDPEEWKEFVARNPSLLKNMT 194
G+GKI ++ EF++ +K T
Sbjct: 54 TGNGKI---QFPEFLSMMGRRMKQTT 76
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 47 GIISKEEFQLGLFK-NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEK 105
G I+KE Q L + + + + +F D +G I+F EF+ + + +
Sbjct: 21 GFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI 80
Query: 106 VSFAFQLFDVSQTGFIEREEVKGVILTL 133
+ AF+ FD TG+I + ++ +L L
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNL 108
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 55 QLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFD 114
+LG KN +++ D + + D ++G IE+ EF+ S+ + E++ AF LFD
Sbjct: 390 ELGELKNVEEE---VDNILKEVDFDKNGYIEYSEFI-SVCMDKQILFSEERLRRAFNLFD 445
Query: 115 VSQTGFIEREEVKGVI-LTLLVKEMILALLKESD 147
++G I +EE+ + LT + ++ +L E+D
Sbjct: 446 TDKSGKITKEELANLFGLTSISEKTWNDVLGEAD 479
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I F EF+ + + E++ AF++FD G+I E++ V L K
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEXIRE----ADIDGDGQVNYEEF 141
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F++FD + G+I+ +E+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLDELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +E EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEXLEFM 157
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ + + E++ AF++FD G+I E++ V L K
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 116
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ I + AD GDG+++ EE+
Sbjct: 117 -------------LTDEEVDQXIRE----ADIDGDGQVNYEEF 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 19/103 (18%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ ++ E++ AF++FD GFI E++ V+ L K
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 113
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + AD GDG+++ EE+
Sbjct: 114 -------------LTDEEVDEMIRE----ADIDGDGQVNYEEF 139
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ + + E++ AF++FD G+I E++ V L K
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ I + AD GDG+++ EE+
Sbjct: 116 -------------LTDEEVDEXIRE----ADIDGDGQVNYEEF 141
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F+++D + G+I+ +E+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMWDKNADGYIDLDELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +E+ EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFM 157
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD Q GFI E++ V+ L K L+D+ ++ +I +
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-------------LTDEEVDEMIRE-- 48
Query: 164 EDADFKGDGKIDPEEW 179
AD GDG+I+ EE+
Sbjct: 49 --ADVDGDGQINYEEF 62
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 36/163 (22%)
Query: 45 DDGIISKEEFQLGL-----FKNHKKQSLIA----------DRVFQLFDLKRDGGIEFEEF 89
+DG++ ++E G K SLI D + L D+ G IE+ EF
Sbjct: 344 NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEF 403
Query: 90 VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLI 149
+ S +I E++ AF++FD +G I +E + L ++D
Sbjct: 404 IAS-AIDRTILLSRERMERAFKMFDKDGSGKISTKE-------------LFKLFSQADSS 449
Query: 150 LSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKN 192
+ + +E+II E D DG++D + EFV + ++N
Sbjct: 450 IQMEELESII----EQVDNNKDGEVD---FNEFVEMLQNFVRN 485
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGV 129
D + Q D R+G IE+ EFV ++ + E++ AFQ FD +G I EE+
Sbjct: 364 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL--- 419
Query: 130 ILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
L ++ + ++ ++ D DG++D EE+ E + +
Sbjct: 420 ----------------GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 58 LFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLF 113
L +N K+ L D + + D G I+FEEF VR + + E+++ F++F
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 105
Query: 114 DVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGK 173
D + GFI+ EE+ G IL + +IE I +D+D DG+
Sbjct: 106 DKNADGFIDIEEL-GEILR----------------ATGEHVIEEDIEDLMKDSDKNNDGR 148
Query: 174 IDPEEW 179
ID +E+
Sbjct: 149 IDFDEF 154
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 82 GGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKE 137
G ++F+EF VRS+ + E++S F++ D + G+I+ +E+K
Sbjct: 70 GTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMXDKNADGYIDLDELK---------- 118
Query: 138 MILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
+ L + I DDI E + +D D DG+ID +E+ EF+
Sbjct: 119 --IMLQATGETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFM 157
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 98 PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEA 157
+ E++S F++FD + G+I+ EE+K + L + I DDI E
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELK------------IMLQATGETITEDDIEEL 56
Query: 158 IINKAFEDADFKGDGKIDPEEWKEFV 183
+ +D D DG+ID +E+ EF+
Sbjct: 57 M-----KDGDKNNDGRIDYDEFLEFM 77
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGV 129
D + Q D R+G IE+ EFV ++ + E++ AFQ FD +G I EE+
Sbjct: 90 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL--- 145
Query: 130 ILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
L ++ + ++ ++ D DG++D EE+ E + +
Sbjct: 146 ----------------GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
E++S F++FD + G+I+ EE+K + L + I DDI E +
Sbjct: 3 GKSEEELSDLFRMFDKNADGYIDLEELK------------IMLQATGETITEDDIEELM- 49
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
+D D DG+ID +E+ EF+
Sbjct: 50 ----KDGDKNNDGRIDYDEFLEFM 69
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK 136
D +G I+F EF+ ++ + +E++ AF++FD G+I E++ V+ L K
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDT-DSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 110
Query: 137 EMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
L+D+ ++ +I + A+ GDG+++ EE+
Sbjct: 111 -------------LTDEEVDEMIRE----ANIDGDGQVNYEEF 136
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 69 ADRVFQLFDLKRDGGIEFEEFVRSLSI-------FHPEAPHAEKVSFAFQLFDVSQTGFI 121
D + +LFD DG +E E R L + F ++ + AF+L+D G+I
Sbjct: 149 TDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYI 208
Query: 122 EREEVKGVILTLLVK 136
+ E+ ++ L K
Sbjct: 209 DENELDALLKDLCEK 223
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 58 LFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLF 113
L +N K+ L D + + D G I+FEEF VR + + E+++ F++F
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 105
Query: 114 DVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
D + GFI+ EE+ ++ + +E I L+K+SD
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 17/80 (21%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++S F++FD + G+I+ EE+K + L + I DDI E +
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELK------------IMLQATGETITEDDIEELM----- 47
Query: 164 EDADFKGDGKIDPEEWKEFV 183
+D D DG+ID +E+ EF+
Sbjct: 48 KDGDKNNDGRIDYDEFLEFM 67
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 58 LFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLF 113
L +N K+ L D + + D G I+FEEF VR + + E+++ F++F
Sbjct: 46 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 102
Query: 114 DVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
D + GFI+ EE+ ++ + +E I L+K+SD
Sbjct: 103 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 139
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 98 PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEA 157
+ E++S F++FD + G+I+ EE+K + L + I DDI E
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELK------------IMLQATGETITEDDIEEL 51
Query: 158 IINKAFEDADFKGDGKIDPEEWKEFV 183
+ +D D DG+ID +E+ EF+
Sbjct: 52 M-----KDGDKNNDGRIDYDEFLEFM 72
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 14/81 (17%)
Query: 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFE 164
+V F++ D Q+GFIE EE+KGV L L+D +A++ A
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGV----------LKGFSAHGRDLNDTETKALL--AAG 89
Query: 165 DADFKGDGKIDPEEWKEFVAR 185
D+D DGKI +E+ + VA+
Sbjct: 90 DSDH--DGKIGADEFAKMVAQ 108
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 47 GIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSL 93
G + +EEF+ L + + A+ VFQ D RDG I F+EF R
Sbjct: 42 GRLEREEFR-ALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 87
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 58 LFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLF 113
L +N K+ L D + + D G I+FEEF VR + + E+++ F++F
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELADCFRIF 105
Query: 114 DVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
D + GFI+ EE+ ++ + +E I L+K+SD
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTL---LVKEM 138
G I+FEEF+ ++ E E++ AF+LFD +G I ++++ V L L +E
Sbjct: 79 GTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138
Query: 139 ILALLKESD 147
+ ++ E+D
Sbjct: 139 LQEMIAEAD 147
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKG 128
A RVF+ FD +DG + +EF F P + V F F+ DV G + +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTS 61
Query: 129 VILTLL 134
I +L
Sbjct: 62 CIEKML 67
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 110 FQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFK 169
F++ D Q+GFIE +E+K + +L + + + AD
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAA--------------ADHD 92
Query: 170 GDGKIDPEEWKEFV 183
GDGKI EE++E V
Sbjct: 93 GDGKIGAEEFQEMV 106
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Query: 47 GIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKV 106
G I+KE+ + GL K+ K D + D G I++ EF+ + + + +
Sbjct: 67 GYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLI 124
Query: 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDA 166
AF++FDV G I E+ ++ K I + D+ + + D
Sbjct: 125 YCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT----QRDV--------NRVKRMIRDV 172
Query: 167 DFKGDGKIDPEEWKEFV 183
D DGKID E+ E +
Sbjct: 173 DKNNDGKIDFHEFSEMM 189
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 77 DLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTL 133
D +G I+F EF+ ++ + E++ AF++FD G+I E++ V+ L
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 58 LFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLF 113
L +N K+ L D + + D G I+FEEF VR + + E++ F++F
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIF 105
Query: 114 DVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
D + GFI+ EE+ ++ + +E I L+K+SD
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
E++S F++FD + G+I+ +E+K + L + I DDI E +
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELK------------IMLQATGETITEDDIEELM- 48
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
+D D DG+ID +E+ EF+
Sbjct: 49 ----KDGDKNNDGRIDYDEFLEFM 68
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 49 ISKEEF------QLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFV 90
ISK EF +L F ++K + DR+ + DL DG ++F+EF+
Sbjct: 32 ISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126
D+V D ++G IE+ EFV ++++ E++ AF++FD +G I E+
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 440
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
+ A+ V AF + D ++GFIE +E+K + L K L+D + +
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELK----------LFLQNFKADARALTDGETKTFL 86
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
D GDGKI +EW V
Sbjct: 87 KA----GDSDGDGKIGVDEWTALV 106
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126
D+V D ++G IE+ EFV ++++ E++ AF++FD +G I E+
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 463
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 120 FIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFED 165
F R ++KG ILT+++ ++ K+ + +++ +IEAI N FE
Sbjct: 293 FNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDFES 338
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126
D+V D ++G IE+ EFV ++++ E++ AF++FD +G I E+
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 464
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 48 IISKEEF------QLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFV 90
+SK EF +L F ++K + DR+ + DL DG ++F+EF+
Sbjct: 29 TLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFL 77
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 53
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 54 ---DIDGDGQVNYEEF 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 47
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 48 ---DIDGDGQVNYEEF 60
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 54
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 55 ---DIDGDGQVNYEEF 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 51
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 52 ---DIDGDGQVNYEEF 64
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 50
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 51 ---DIDGDGQVNYEEF 63
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
A+ + AF D ++GFIE +E+K + L + K L+D +A +
Sbjct: 38 GKSADDIKKAFVFIDQDKSGFIEEDELK----------LFLQVFKAGARALTDAETKAFL 87
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
D GDG I EEW V
Sbjct: 88 KA----GDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
A+ + AF D ++GFIE +E+K + L + K L+D +A +
Sbjct: 37 GKSADDIKKAFVFIDQDKSGFIEEDELK----------LFLQVFKAGARALTDAETKAFL 86
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
D GDG I EEW V
Sbjct: 87 KA----GDSDGDGAIGVEEWVALV 106
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 70 DRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREE 125
D + + D G I+FEEF VR + + E+++ F++FD + G+I+ EE
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDAEE 114
Query: 126 VKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
+ + + S ++D+ IE+++ D D DG+ID +E+
Sbjct: 115 -------------LAEIFRASGEHVTDEEIESLMK----DGDKNNDGRIDFDEF 151
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 72 VFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQL----FDVSQTGFIEREEVK 127
FQ+FD DG + EE +L +AE + QL FD++ + R+ +K
Sbjct: 10 CFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIK 69
Query: 128 GVILTLLVKEMI---LALLKESD------------LILSDDIIEAIINKAFEDADFKGDG 172
T KEM+ AL KE + L L D + + + + ++ GDG
Sbjct: 70 --TPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDG 127
Query: 173 KIDPEEW 179
I+ E +
Sbjct: 128 AINYESF 134
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 98 PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEA 157
E E++ AF++FD G I E++ V+ L K L+DD ++
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK-------------LTDDEVDE 48
Query: 158 IINKAFEDADFKGDGKIDPEEW 179
+I +A D GDG I+ EE+
Sbjct: 49 MIREA----DIDGDGHINYEEF 66
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 29/50 (58%)
Query: 83 GIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILT 132
+ +E+++ LSI + + E++ F FD + TG++ + ++K ++ T
Sbjct: 63 NLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTT 112
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 20/104 (19%)
Query: 47 GIISKEE---FQLGLFKNHKKQ------SLIADRVFQLFDLKRDGGIEFEEFVRSLSI-- 95
G IS E F LF HKK+ D ++FD +DG ++ + R L++
Sbjct: 119 GYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARILALQE 178
Query: 96 -----FHPEAPHA--EKVSFA--FQLFDVSQTGFIEREEVKGVI 130
F +A K F F +DVS+TG +E EV G +
Sbjct: 179 NFLLQFKXDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFV 222
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 70 DRVFQLFDLKRDGGIEFEEF----VRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREE 125
D + + D G I+FEEF VR + + E+++ F++FD + G+I+ EE
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAELFRIFDRNADGYIDAEE 114
Query: 126 VKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
+ + + S ++D+ IE+++ D D DG+ID +E+
Sbjct: 115 -------------LAEIFRASGEHVTDEEIESLMK----DGDKNNDGRIDFDEF 151
>pdb|2AEX|A Chain A, The 1.58a Crystal Structure Of Human Coproporphyrinogen
Oxidase Reveals The Structural Basis Of Hereditary
Coproporphyria
Length = 346
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 80 RDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQT 118
+DG + F S S+ HP+ PHA + F ++ F+V +
Sbjct: 124 KDGKLPFCAMGVS-SVIHPKNPHAPTIHFNYRYFEVEEA 161
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 18/121 (14%)
Query: 64 KQSLIADRVFQLFD-LKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIE 122
K L AD + + D +K +G ++F ++ +A A V F+ D +GFIE
Sbjct: 4 KDLLKADDIKKALDAVKAEGSFNHKKF---FALVGLKAMSANDVKKVFKAIDADASGFIE 60
Query: 123 REEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182
EE+K V+ + D+ +A + AD GDGKI +E++
Sbjct: 61 EEELKFVLKSFAAD--------------GRDLTDAETKAFLKAADKDGDGKIGIDEFETL 106
Query: 183 V 183
V
Sbjct: 107 V 107
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGV 129
D + D R+G I++ EFV ++++ +K+ AFQ FD G I +E+ V
Sbjct: 110 DAILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
Query: 130 -----ILTLLVKEMILALLKESD 147
+ + KEMI + +D
Sbjct: 169 FGLDHLESKTWKEMISGIDSNND 191
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
A A+ + AF + D ++GFIE +E+K + L + L+D +A +
Sbjct: 38 AKSADDIKKAFFVIDQDKSGFIEEDELK----------LFLQVFSAGARALTDAETKAFL 87
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
D GDG I +EW V
Sbjct: 88 KA----GDSDGDGAIGVDEWAALV 107
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 46 DGIISKEEFQLGLFK--NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94
DG IS E + + K H+ + + + DL DG ++FEEFVR +S
Sbjct: 116 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 74 QLFDLKRDGGIEFEEFVRSLSIFHPE--APHAEKVSF-----AFQLFDVSQTGFIEREEV 126
Q ++ G ++F++FV + P+ A A+ + AF+ FD + G I E+
Sbjct: 68 QQINMNLGGHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 124
Query: 127 KGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
+ + LL + + IE II D D GDG++D EE+ ++R
Sbjct: 125 REAMRKLLGHQ------------VGHRDIEEIIR----DVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 46 DGIISKEEFQLGLFK--NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94
DG IS E + + K H+ + + + DL DG ++FEEFVR +S
Sbjct: 102 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 74 QLFDLKRDGGIEFEEFVRSLSIFHPE--APHAEKVSF-----AFQLFDVSQTGFIEREEV 126
Q ++ G ++F++FV + P+ A A+ + AF+ FD + G I E+
Sbjct: 54 QQINMNLGGHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
Query: 127 KGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
+ + LL + + IE II D D GDG++D EE+ ++R
Sbjct: 111 REAMRKLLGHQ------------VGHRDIEEIIR----DVDLNGDGRVDFEEFVRMMSR 153
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O82|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O83|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O83|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O84|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3O84|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3U16|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U16|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U17|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
pdb|3U17|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
Length = 544
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)
Query: 78 LKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFI--EREEVKGVILTLLV 135
+ R G E + L + HPE HA V+ + F FI E+K V+L +
Sbjct: 442 INRGGEKIASEEIEKLILLHPEVMHAALVAIVDEQFGEKSCAFIVSRNPELKAVVLRRHL 501
Query: 136 KEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183
E+ +A K D I K E GK+D ++ + +
Sbjct: 502 MELGIAQYKLPDQI-----------KLIESLPLTAVGKVDKKQLRSIL 538
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 45 DDGIISKEEFQLGLFK-NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHA 103
+ G +S +E GL K ++K +V + D G I + +F+ + +I
Sbjct: 70 NSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA-TIDKQTYLKK 128
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA- 162
E F+ FD+ G I EE+K + DDI +I+KA
Sbjct: 129 EVCLIPFKFFDIDGNGKISVEELKRIFG-------------------RDDIENPLIDKAI 169
Query: 163 ---FEDADFKGDGKIDPEEWKEFVAR 185
++ D GDG+ID E+ +++
Sbjct: 170 DSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
A+ V F + D ++GFIE +E+ G IL + KE+ +++
Sbjct: 40 ADDVKKVFHILDKDKSGFIEEDEL-GSILKGFSSDAADLSAKETKTLMAA---------- 88
Query: 163 FEDADFKGDGKIDPEEWKEFVARN 186
D GDGKI EE+ VA +
Sbjct: 89 ---GDKDGDGKIGVEEFSTLVAES 109
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 81 DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMIL 140
+G I+F +F+ ++ + E++ AF++F G+I +++ V+ L K
Sbjct: 361 NGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEK---- 416
Query: 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184
L+D+ ++ +I +A D GDG+++ E++ + +
Sbjct: 417 ---------LTDEEVDEMIREAGID----GDGQVNYEQFVQMMT 447
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 46 DGIISKEEFQLGLFK--NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94
DG IS E + + K H+ + + + DL DG ++FEEFVR +S
Sbjct: 21 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126
D+V D ++G IE+ EFV +++ E++ AF+ FD +G I E+
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTEL 440
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGV 129
D + D R+G I++ EFV ++++ +K+ AFQ FD G I +E+ V
Sbjct: 393 DAILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 82 GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILA 141
G + F +F+ ++ E E++ AF+LFD +TG I + +K V
Sbjct: 57 GKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----------- 105
Query: 142 LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
KE L+D+ ++ +I+ +AD GDG++ +E+
Sbjct: 106 --KELGENLTDEELQEMID----EADRDGDGEVSEQEF 137
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 74 QLFDLKRDGGIEFEEFVRSLSIFHPE--APHAEKVSF-----AFQLFDVSQTGFIEREEV 126
Q ++ G ++F++FV + P+ A A+ + AF+ FD + G I E+
Sbjct: 54 QQINMNLGGHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
Query: 127 KGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
+ + LL + + IE II D D GDG++D EE+ ++R
Sbjct: 111 REAMRALLGHQ------------VGHRDIEEIIR----DVDLNGDGRVDFEEFVRMMSR 153
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 46 DGIISKEEFQLGL--FKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94
DG IS E + + H+ + + + DL DG ++FEEFVR +S
Sbjct: 102 DGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 68 IADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVK 127
+A+ +F+ D DG + +EE +S P + + + F+ D+ G I+ E
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSSKRP-IKNEQLLQLIFKAIDIDGNGEIDLAEFT 59
Query: 128 GVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185
A +KE D LSD+ + I DAD GDGK+ EE F +
Sbjct: 60 ----------KFAAAVKEQD--LSDEKVGLKILYKLMDAD--GDGKLTKEEVTTFFKK 103
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 46 DGIISKEEF-----QLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94
+G ISK+E LG N + +I R+ D+ DG ++FEEFV L
Sbjct: 50 NGFISKQELGTAMRSLGYMPNEVELEVIIQRL----DMDGDGQVDFEEFVTLLG 99
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 17/80 (21%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I E++ V+ L K L+D+ ++ +I
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMI---- 47
Query: 164 EDADFKGDGKIDPEEWKEFV 183
+AD GDG+++ EE+ + +
Sbjct: 48 READIDGDGQVNYEEFVQMM 67
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
A +V F+ D Q+G+++ EE+K + L + L+ +
Sbjct: 41 ANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAA----------- 89
Query: 163 FEDADFKGDGKIDPEEWKEFV 183
AD GDGKI EE++E V
Sbjct: 90 ---ADNDGDGKIGAEEFQEMV 107
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159
+ A+ V AF + ++GFIE +E+K + L K L+D + +
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELK----------LFLQNFKADARALTDGETKTFL 86
Query: 160 NKAFEDADFKGDGKIDPEEWKEFV 183
D GDGKI +EW V
Sbjct: 87 KA----GDSDGDGKIGVDEWTALV 106
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
A+ V F + D ++GFIE +E+ G IL + KE+ +++
Sbjct: 40 ADDVKKVFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTLMAA---------- 88
Query: 163 FEDADFKGDGKIDPEEWKEFVARN 186
D GDGKI EE+ VA +
Sbjct: 89 ---GDKDGDGKIGVEEFSTLVAES 109
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
A+ V F + D ++GFIE +E+ G IL + KE+ +++
Sbjct: 4 ADDVKKVFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTLMAA---------- 52
Query: 163 FEDADFKGDGKIDPEEWKEFVARN 186
D GDGKI EE+ VA +
Sbjct: 53 ---GDKDGDGKIGVEEFSTLVAES 73
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++FD G+I +++ V+ L K L+D+ ++ +I +A
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEK-------------LTDEEVDEMIREA- 52
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ E++
Sbjct: 53 ---DIDGDGQVNYEDF 65
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKA 162
A+ V F + D ++GFIE +E+ G IL + KE+ ++++
Sbjct: 41 ADDVKKVFHMLDKDKSGFIEEDEL-GFILKGFSPDARDLSAKETKMLMAA---------- 89
Query: 163 FEDADFKGDGKIDPEEWKEFVARN 186
D GDGKI +E+ VA +
Sbjct: 90 ---GDKDGDGKIGVDEFSTLVAES 110
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 84 IEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALL 143
+ F +F+ ++ E E++ AF+LFD +TG I + +K V
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA------------- 47
Query: 144 KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179
KE L+D+ ++ +I+ +AD GDG++ +E+
Sbjct: 48 KELGENLTDEELQEMID----EADRDGDGEVSEQEF 79
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 19/99 (19%)
Query: 86 FEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKE 145
++ F ++ + +KV F + D ++GFIE EE L L +K
Sbjct: 27 YKSFFSTVGLSSKTPDQIKKV---FGILDQDKSGFIEEEE-----LQLFLK--------- 69
Query: 146 SDLILSDDIIEAIINKAFEDA-DFKGDGKIDPEEWKEFV 183
+ S ++ + KAF A D GDGKI EE++ V
Sbjct: 70 -NFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV 107
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 102 HAEKVSFAFQLFDVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
+++ AF LFD ++TG I+ E+K + L + K IL L+ E D
Sbjct: 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYD 53
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 110 FQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDA-DF 168
F + D ++GFIE EE L L +K + S ++ + KAF A D
Sbjct: 47 FGILDQDKSGFIEEEE-----LQLFLK----------NFSSSARVLTSAETKAFLAAGDT 91
Query: 169 KGDGKIDPEEWKEFV 183
GDGKI EE++ V
Sbjct: 92 DGDGKIGVEEFQSLV 106
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 109 AFQLFDVSQTGFIEREEVKGVILTL---LVKEMILALLKESD 147
AF LFD++ GF++ E+K + L L K IL L+ E D
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYD 69
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
+++ AFQLFD TG I + ++ V KE L+D+ + A+I
Sbjct: 96 DEIKRAFQLFDDDHTGKISIKNLRRVA-------------KELGETLTDEELRAMI---- 138
Query: 164 EDADFKGDGKIDPEEW 179
E+ D GDG+I+ E+
Sbjct: 139 EEFDLDGDGEINENEF 154
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 17/76 (22%)
Query: 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163
E++ AF++ D G+I E++ V+ L K L+D+ ++ +I +A
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEK-------------LTDEEVDEMIREA- 74
Query: 164 EDADFKGDGKIDPEEW 179
D GDG+++ EE+
Sbjct: 75 ---DIDGDGQVNYEEF 87
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,909,276
Number of Sequences: 62578
Number of extensions: 224781
Number of successful extensions: 1180
Number of sequences better than 100.0: 221
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 373
length of query: 222
length of database: 14,973,337
effective HSP length: 95
effective length of query: 127
effective length of database: 9,028,427
effective search space: 1146610229
effective search space used: 1146610229
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)