Query 041619
Match_columns 222
No_of_seqs 139 out of 1137
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 09:01:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0034 Ca2+/calmodulin-depend 99.9 2.5E-26 5.4E-31 178.6 19.0 179 1-196 1-186 (187)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 6.8E-25 1.5E-29 165.3 17.1 151 18-188 8-159 (160)
3 KOG0044 Ca2+ sensor (EF-Hand s 99.9 7.4E-25 1.6E-29 170.5 17.2 179 1-195 1-185 (193)
4 KOG0027 Calmodulin and related 99.9 1.1E-20 2.4E-25 143.8 16.8 143 24-185 2-149 (151)
5 PTZ00183 centrin; Provisional 99.9 8.9E-20 1.9E-24 139.0 18.0 149 21-188 8-157 (158)
6 KOG0038 Ca2+-binding kinase in 99.8 7.4E-20 1.6E-24 133.4 14.0 176 1-193 1-185 (189)
7 PTZ00184 calmodulin; Provision 99.8 9.3E-19 2E-23 131.8 17.5 144 23-185 4-148 (149)
8 KOG0028 Ca2+-binding protein ( 99.8 2.4E-18 5.2E-23 127.5 15.9 148 20-186 23-171 (172)
9 KOG0031 Myosin regulatory ligh 99.7 4.5E-16 9.7E-21 114.7 16.2 139 23-184 25-164 (171)
10 KOG0037 Ca2+-binding protein, 99.7 2.9E-16 6.3E-21 122.3 13.0 155 29-209 56-215 (221)
11 KOG0036 Predicted mitochondria 99.6 6.1E-14 1.3E-18 118.3 14.9 142 22-188 6-149 (463)
12 KOG0030 Myosin essential light 99.6 8E-14 1.7E-18 101.2 13.1 142 23-184 4-150 (152)
13 PF13499 EF-hand_7: EF-hand do 99.4 2.3E-12 4.9E-17 84.0 7.3 66 105-183 1-66 (66)
14 PLN02964 phosphatidylserine de 99.3 1.6E-11 3.5E-16 111.4 13.7 112 12-130 123-241 (644)
15 KOG4223 Reticulocalbin, calume 99.2 7.1E-11 1.5E-15 97.3 10.0 136 27-181 160-301 (325)
16 KOG0027 Calmodulin and related 99.2 9E-10 1.9E-14 83.6 12.4 106 67-186 8-114 (151)
17 cd05022 S-100A13 S-100A13: S-1 99.1 2.5E-10 5.5E-15 78.7 7.3 69 104-188 8-78 (89)
18 KOG0377 Protein serine/threoni 99.1 9.8E-10 2.1E-14 93.9 11.9 142 29-188 463-618 (631)
19 PTZ00183 centrin; Provisional 99.1 2.2E-09 4.9E-14 81.4 12.9 102 67-185 17-118 (158)
20 COG5126 FRQ1 Ca2+-binding prot 99.1 4.7E-09 1E-13 79.5 12.2 124 68-209 21-151 (160)
21 PTZ00184 calmodulin; Provision 99.1 4.4E-09 9.5E-14 78.8 12.1 101 68-185 12-112 (149)
22 KOG4223 Reticulocalbin, calume 99.0 2.9E-09 6.3E-14 87.9 11.5 142 29-188 76-231 (325)
23 cd05027 S-100B S-100B: S-100B 99.0 1.9E-09 4.1E-14 74.3 8.2 69 104-185 8-79 (88)
24 KOG2562 Protein phosphatase 2 99.0 6.7E-09 1.5E-13 89.3 12.6 152 23-189 271-427 (493)
25 KOG0044 Ca2+ sensor (EF-Hand s 99.0 1E-08 2.2E-13 80.2 12.1 111 64-191 23-134 (193)
26 cd05026 S-100Z S-100Z: S-100Z 99.0 5E-09 1.1E-13 73.0 8.5 71 104-187 10-83 (93)
27 cd05031 S-100A10_like S-100A10 98.9 1.1E-08 2.3E-13 71.4 8.1 75 103-190 7-84 (94)
28 PF13499 EF-hand_7: EF-hand do 98.9 7E-09 1.5E-13 67.3 6.6 61 31-93 1-66 (66)
29 cd05025 S-100A1 S-100A1: S-100 98.9 1.4E-08 3.1E-13 70.5 8.6 74 103-189 8-84 (92)
30 KOG0037 Ca2+-binding protein, 98.9 2.1E-08 4.5E-13 78.7 9.8 89 29-126 123-214 (221)
31 cd05029 S-100A6 S-100A6: S-100 98.8 2.4E-08 5.2E-13 68.8 8.4 69 104-186 10-80 (88)
32 cd05022 S-100A13 S-100A13: S-1 98.8 2E-08 4.4E-13 69.2 7.9 69 27-97 5-77 (89)
33 KOG0028 Ca2+-binding protein ( 98.8 8.3E-08 1.8E-12 71.8 11.2 104 67-187 33-136 (172)
34 smart00027 EH Eps15 homology d 98.8 3.6E-08 7.8E-13 69.0 8.9 72 23-97 3-74 (96)
35 cd00213 S-100 S-100: S-100 dom 98.8 6.9E-08 1.5E-12 66.4 8.4 71 103-186 7-80 (88)
36 cd00052 EH Eps15 homology doma 98.8 4.7E-08 1E-12 63.3 7.2 63 107-188 2-64 (67)
37 cd05023 S-100A11 S-100A11: S-1 98.8 8.1E-08 1.8E-12 66.3 8.7 71 103-186 8-81 (89)
38 smart00027 EH Eps15 homology d 98.7 9.9E-08 2.1E-12 66.8 8.6 71 102-191 8-78 (96)
39 PLN02964 phosphatidylserine de 98.7 1.2E-07 2.6E-12 86.6 11.3 99 67-186 143-244 (644)
40 cd00252 SPARC_EC SPARC_EC; ext 98.7 8.5E-08 1.8E-12 69.3 7.9 62 102-184 46-107 (116)
41 cd05027 S-100B S-100B: S-100B 98.7 1.4E-07 3E-12 65.0 8.2 69 27-97 5-81 (88)
42 cd05026 S-100Z S-100Z: S-100Z 98.7 1.6E-07 3.4E-12 65.4 8.4 68 28-97 8-83 (93)
43 PF13833 EF-hand_8: EF-hand do 98.7 6.8E-08 1.5E-12 60.1 5.9 52 117-185 1-53 (54)
44 KOG0040 Ca2+-binding actin-bun 98.7 7.2E-07 1.6E-11 85.8 14.5 141 20-183 2243-2396(2399)
45 KOG4666 Predicted phosphate ac 98.6 8.1E-08 1.8E-12 79.4 6.9 126 45-191 240-365 (412)
46 cd00051 EFh EF-hand, calcium b 98.6 2.2E-07 4.9E-12 58.3 7.4 61 106-183 2-62 (63)
47 KOG0034 Ca2+/calmodulin-depend 98.6 5.4E-07 1.2E-11 70.5 10.5 89 36-126 72-169 (187)
48 cd00213 S-100 S-100: S-100 dom 98.6 3.4E-07 7.3E-12 63.0 8.1 69 26-96 4-80 (88)
49 cd00052 EH Eps15 homology doma 98.6 3E-07 6.5E-12 59.5 7.4 61 33-96 2-62 (67)
50 cd05029 S-100A6 S-100A6: S-100 98.6 6.4E-07 1.4E-11 61.7 8.6 69 27-97 7-81 (88)
51 KOG4251 Calcium binding protei 98.6 3.1E-07 6.8E-12 73.3 7.9 148 27-184 98-308 (362)
52 cd05025 S-100A1 S-100A1: S-100 98.5 4.7E-07 1E-11 62.9 7.5 67 29-97 8-82 (92)
53 cd05023 S-100A11 S-100A11: S-1 98.5 8.2E-07 1.8E-11 61.2 8.3 69 27-97 6-82 (89)
54 cd05031 S-100A10_like S-100A10 98.5 9.2E-07 2E-11 61.6 8.3 66 29-96 7-80 (94)
55 PF14658 EF-hand_9: EF-hand do 98.5 6.8E-07 1.5E-11 57.4 6.7 61 108-185 2-64 (66)
56 cd05030 calgranulins Calgranul 98.4 9.5E-07 2.1E-11 60.8 7.3 67 104-186 8-80 (88)
57 KOG1029 Endocytic adaptor prot 98.4 3.2E-06 6.8E-11 77.0 12.2 168 23-213 9-285 (1118)
58 KOG0036 Predicted mitochondria 98.4 3.7E-06 8E-11 71.9 12.0 134 28-186 49-184 (463)
59 KOG2643 Ca2+ binding protein, 98.4 1.8E-06 3.9E-11 74.1 9.8 128 34-185 322-453 (489)
60 PF13833 EF-hand_8: EF-hand do 98.4 1.2E-06 2.5E-11 54.5 6.4 50 45-94 1-52 (54)
61 KOG0751 Mitochondrial aspartat 98.3 5.8E-06 1.3E-10 72.1 10.6 104 22-130 28-134 (694)
62 cd00252 SPARC_EC SPARC_EC; ext 98.3 3.8E-06 8.3E-11 60.7 8.0 64 25-93 43-106 (116)
63 cd00051 EFh EF-hand, calcium b 98.3 4.3E-06 9.3E-11 52.2 7.3 56 70-126 3-58 (63)
64 KOG2643 Ca2+ binding protein, 98.3 1.5E-05 3.2E-10 68.7 12.2 131 32-184 235-383 (489)
65 cd05030 calgranulins Calgranul 98.3 5.3E-06 1.1E-10 57.1 7.6 71 27-97 5-81 (88)
66 KOG0031 Myosin regulatory ligh 98.3 7.4E-06 1.6E-10 61.0 8.6 72 101-185 29-129 (171)
67 cd05024 S-100A10 S-100A10: A s 98.3 1E-05 2.2E-10 55.6 8.6 68 27-97 5-78 (91)
68 KOG0041 Predicted Ca2+-binding 98.2 1.6E-05 3.4E-10 61.8 9.1 110 15-126 84-197 (244)
69 PF00036 EF-hand_1: EF hand; 98.2 2.2E-06 4.9E-11 46.2 3.1 22 105-126 1-22 (29)
70 cd05024 S-100A10 S-100A10: A s 98.1 3.7E-05 8.1E-10 52.8 8.9 71 104-187 8-78 (91)
71 PF12763 EF-hand_4: Cytoskelet 98.1 1.4E-05 3E-10 56.7 6.6 70 23-96 3-72 (104)
72 PRK12309 transaldolase/EF-hand 98.1 4.1E-05 8.9E-10 66.6 10.6 104 49-186 282-386 (391)
73 PF00036 EF-hand_1: EF hand; 97.9 1.7E-05 3.8E-10 42.7 3.6 27 69-95 2-28 (29)
74 KOG0030 Myosin essential light 97.9 0.00034 7.4E-09 51.4 11.0 106 65-185 9-116 (152)
75 KOG0751 Mitochondrial aspartat 97.8 0.00028 6.1E-09 61.9 11.6 87 45-132 87-207 (694)
76 PF14658 EF-hand_9: EF-hand do 97.8 6.9E-05 1.5E-09 48.2 5.8 55 72-126 3-58 (66)
77 PF13405 EF-hand_6: EF-hand do 97.8 3.1E-05 6.7E-10 42.3 3.1 22 105-126 1-22 (31)
78 KOG0041 Predicted Ca2+-binding 97.8 0.00014 3E-09 56.7 7.7 68 103-187 98-165 (244)
79 KOG0038 Ca2+-binding kinase in 97.8 0.00014 3.1E-09 53.8 7.2 97 31-132 75-177 (189)
80 KOG4065 Uncharacterized conser 97.7 0.00013 2.9E-09 51.7 6.5 66 108-182 71-142 (144)
81 PF13202 EF-hand_5: EF hand; P 97.6 8.4E-05 1.8E-09 38.5 2.9 21 106-126 1-21 (25)
82 KOG0046 Ca2+-binding actin-bun 97.5 0.00032 7E-09 61.9 7.5 75 20-97 9-87 (627)
83 PF13202 EF-hand_5: EF hand; P 97.5 0.00011 2.4E-09 38.0 2.8 24 160-183 2-25 (25)
84 KOG4251 Calcium binding protei 97.5 0.00048 1E-08 55.4 7.5 98 69-183 238-343 (362)
85 PF12763 EF-hand_4: Cytoskelet 97.5 0.00053 1.1E-08 48.6 6.8 70 101-190 7-76 (104)
86 KOG0169 Phosphoinositide-speci 97.5 0.0041 8.8E-08 57.4 14.0 150 21-188 127-277 (746)
87 PRK12309 transaldolase/EF-hand 97.4 0.00043 9.3E-09 60.3 7.1 48 65-126 332-379 (391)
88 KOG4347 GTPase-activating prot 97.3 0.00061 1.3E-08 61.6 7.0 112 13-126 487-612 (671)
89 PF14788 EF-hand_10: EF hand; 97.3 0.0011 2.5E-08 40.2 5.7 48 48-95 1-49 (51)
90 KOG0040 Ca2+-binding actin-bun 97.1 0.0045 9.9E-08 60.8 10.5 96 69-180 2255-2356(2399)
91 PF13405 EF-hand_6: EF-hand do 97.0 0.0011 2.4E-08 36.0 3.6 26 32-59 2-27 (31)
92 PF10591 SPARC_Ca_bdg: Secrete 97.0 0.00061 1.3E-08 49.1 3.3 64 100-182 50-113 (113)
93 KOG0377 Protein serine/threoni 97.0 0.0027 5.8E-08 55.3 7.6 82 45-126 512-609 (631)
94 KOG2562 Protein phosphatase 2 97.0 0.0075 1.6E-07 52.8 10.2 90 35-126 179-300 (493)
95 PF10591 SPARC_Ca_bdg: Secrete 97.0 0.00059 1.3E-08 49.1 2.7 59 29-90 53-111 (113)
96 PF14788 EF-hand_10: EF hand; 96.5 0.0085 1.8E-07 36.4 4.9 48 121-185 2-49 (51)
97 KOG0046 Ca2+-binding actin-bun 96.5 0.0098 2.1E-07 52.8 6.9 68 103-185 18-85 (627)
98 PF09279 EF-hand_like: Phospho 96.3 0.016 3.6E-07 39.0 5.9 71 105-188 1-72 (83)
99 smart00054 EFh EF-hand, calciu 96.0 0.012 2.7E-07 29.9 3.5 26 160-185 3-28 (29)
100 smart00054 EFh EF-hand, calciu 95.9 0.012 2.7E-07 29.9 3.2 21 106-126 2-22 (29)
101 KOG4065 Uncharacterized conser 95.7 0.054 1.2E-06 38.7 6.4 69 20-92 59-142 (144)
102 PF09069 EF-hand_3: EF-hand; 95.6 0.13 2.8E-06 35.3 7.8 82 103-193 2-83 (90)
103 PLN02952 phosphoinositide phos 95.2 0.22 4.7E-06 45.9 10.4 95 80-186 13-111 (599)
104 KOG4578 Uncharacterized conser 95.0 0.016 3.4E-07 48.7 2.3 70 103-188 332-401 (421)
105 KOG0039 Ferric reductase, NADH 94.3 0.12 2.7E-06 48.2 6.6 95 81-192 2-96 (646)
106 KOG3866 DNA-binding protein of 93.9 0.15 3.2E-06 42.7 5.4 70 107-185 247-324 (442)
107 KOG4666 Predicted phosphate ac 93.7 0.27 5.9E-06 41.5 6.7 93 30-126 259-353 (412)
108 PF09279 EF-hand_like: Phospho 93.6 0.2 4.4E-06 33.5 5.1 57 69-126 2-63 (83)
109 KOG1955 Ral-GTPase effector RA 93.0 0.27 5.9E-06 43.7 6.0 74 21-97 222-295 (737)
110 KOG0035 Ca2+-binding actin-bun 92.9 0.57 1.2E-05 44.8 8.3 103 21-126 738-846 (890)
111 PF05517 p25-alpha: p25-alpha 92.8 0.71 1.5E-05 35.0 7.4 66 30-97 2-71 (154)
112 KOG3555 Ca2+-binding proteogly 92.6 0.19 4.2E-06 42.6 4.4 63 103-186 249-311 (434)
113 KOG2557 Uncharacterized conser 92.5 0.39 8.4E-06 41.2 6.1 173 1-193 1-183 (427)
114 KOG0169 Phosphoinositide-speci 92.2 2.5 5.4E-05 39.7 11.4 116 65-188 134-253 (746)
115 KOG1707 Predicted Ras related/ 91.7 1.7 3.7E-05 39.7 9.5 154 23-190 188-348 (625)
116 KOG0998 Synaptic vesicle prote 91.7 0.15 3.2E-06 49.1 3.1 143 22-187 121-347 (847)
117 PF09068 EF-hand_2: EF hand; 91.4 2.9 6.3E-05 30.6 9.0 94 14-126 25-119 (127)
118 KOG0042 Glycerol-3-phosphate d 91.2 0.81 1.7E-05 41.6 6.8 78 20-99 583-661 (680)
119 KOG1029 Endocytic adaptor prot 90.3 0.48 1E-05 44.4 4.8 70 23-95 188-257 (1118)
120 KOG2243 Ca2+ release channel ( 90.3 1.8 4E-05 43.4 8.7 60 108-185 4061-4120(5019)
121 PF08414 NADPH_Ox: Respiratory 90.3 1 2.2E-05 31.3 5.3 63 28-97 28-94 (100)
122 PF14513 DAG_kinase_N: Diacylg 90.1 0.44 9.6E-06 35.4 3.7 72 4-79 4-81 (138)
123 KOG3555 Ca2+-binding proteogly 88.6 1.5 3.2E-05 37.5 6.1 98 22-126 199-304 (434)
124 KOG1955 Ral-GTPase effector RA 87.8 1.4 3E-05 39.4 5.7 63 104-185 231-293 (737)
125 PF05042 Caleosin: Caleosin re 87.6 8.5 0.00018 29.7 9.2 57 69-126 98-160 (174)
126 KOG4286 Dystrophin-like protei 87.4 20 0.00044 34.0 13.0 167 15-193 405-588 (966)
127 KOG4347 GTPase-activating prot 86.9 1.7 3.8E-05 40.0 6.0 78 84-179 535-612 (671)
128 PF05042 Caleosin: Caleosin re 86.9 3.4 7.5E-05 31.8 6.7 138 32-183 9-164 (174)
129 KOG4578 Uncharacterized conser 86.6 0.5 1.1E-05 40.0 2.2 58 69-126 335-392 (421)
130 KOG1265 Phospholipase C [Lipid 86.1 16 0.00034 35.4 11.8 125 45-188 161-302 (1189)
131 PF08726 EFhand_Ca_insen: Ca2+ 84.5 0.47 1E-05 30.9 0.9 25 101-126 3-27 (69)
132 PLN02952 phosphoinositide phos 78.1 24 0.00052 32.9 9.8 81 45-126 13-104 (599)
133 KOG1707 Predicted Ras related/ 74.1 5.8 0.00013 36.4 4.7 91 21-117 306-399 (625)
134 KOG0035 Ca2+-binding actin-bun 73.8 10 0.00022 36.7 6.4 73 103-188 746-819 (890)
135 KOG2243 Ca2+ release channel ( 72.8 6 0.00013 40.1 4.7 69 24-94 4039-4119(5019)
136 PF14513 DAG_kinase_N: Diacylg 71.4 11 0.00023 28.1 4.9 71 46-117 5-82 (138)
137 PLN02228 Phosphoinositide phos 69.3 24 0.00052 32.7 7.6 70 99-186 19-93 (567)
138 KOG4301 Beta-dystrobrevin [Cyt 68.5 37 0.00079 29.3 7.9 121 70-207 113-240 (434)
139 KOG0042 Glycerol-3-phosphate d 68.4 11 0.00024 34.6 5.1 64 105-185 594-657 (680)
140 PF02337 Gag_p10: Retroviral G 67.9 35 0.00075 23.4 6.4 54 1-56 1-57 (90)
141 PF05517 p25-alpha: p25-alpha 66.2 27 0.00058 26.4 6.3 63 109-185 7-69 (154)
142 PLN02223 phosphoinositide phos 65.8 44 0.00096 30.7 8.4 77 100-186 12-93 (537)
143 PLN02230 phosphoinositide phos 64.6 42 0.0009 31.3 8.2 76 100-186 25-103 (598)
144 PF08414 NADPH_Ox: Respiratory 61.6 53 0.0011 23.0 6.5 63 104-185 30-92 (100)
145 PF04876 Tenui_NCP: Tenuivirus 60.6 71 0.0015 24.1 7.3 42 149-193 127-168 (175)
146 TIGR02675 tape_meas_nterm tape 59.6 25 0.00054 23.0 4.4 13 117-129 27-39 (75)
147 PF13720 Acetyltransf_11: Udp 56.4 58 0.0013 21.8 6.2 57 20-82 24-80 (83)
148 KOG0506 Glutaminase (contains 55.8 1E+02 0.0022 28.0 8.6 103 69-174 88-198 (622)
149 COG4103 Uncharacterized protei 55.5 71 0.0015 23.9 6.6 84 34-126 34-123 (148)
150 PF00404 Dockerin_1: Dockerin 54.1 16 0.00034 17.8 2.0 15 167-181 1-15 (21)
151 PF12174 RST: RCD1-SRO-TAF4 (R 52.1 63 0.0014 21.0 5.8 46 81-130 6-51 (70)
152 KOG0998 Synaptic vesicle prote 51.5 9.4 0.0002 37.1 1.9 72 23-97 276-347 (847)
153 PLN02222 phosphoinositide phos 51.1 66 0.0014 29.9 7.1 69 101-186 22-91 (581)
154 cd07313 terB_like_2 tellurium 49.8 81 0.0017 21.5 6.9 80 45-126 12-94 (104)
155 PF09682 Holin_LLH: Phage holi 49.7 82 0.0018 22.1 6.1 51 107-166 54-104 (108)
156 PF08976 DUF1880: Domain of un 48.4 16 0.00035 26.2 2.2 32 149-184 3-34 (118)
157 KOG4004 Matricellular protein 44.0 10 0.00022 30.1 0.7 49 75-126 195-244 (259)
158 PF01023 S_100: S-100/ICaBP ty 41.9 70 0.0015 18.6 4.3 33 28-60 4-36 (44)
159 PF12174 RST: RCD1-SRO-TAF4 (R 41.6 78 0.0017 20.5 4.5 33 24-61 22-54 (70)
160 KOG3866 DNA-binding protein of 41.1 55 0.0012 27.9 4.5 83 36-127 250-349 (442)
161 PLN02228 Phosphoinositide phos 40.9 1.3E+02 0.0029 27.9 7.4 60 65-126 22-86 (567)
162 PF11569 Homez: Homeodomain le 40.7 33 0.00071 21.3 2.4 23 13-35 26-48 (56)
163 KOG2871 Uncharacterized conser 40.7 22 0.00047 31.0 2.2 26 101-126 306-331 (449)
164 TIGR01848 PHA_reg_PhaR polyhyd 38.9 72 0.0016 22.6 4.2 65 111-188 10-80 (107)
165 cd03035 ArsC_Yffb Arsenate Red 38.5 47 0.001 23.2 3.4 28 164-191 62-89 (105)
166 PF09068 EF-hand_2: EF hand; 37.5 1.6E+02 0.0035 21.4 10.8 95 84-183 15-123 (127)
167 KOG4403 Cell surface glycoprot 36.0 56 0.0012 29.1 4.0 53 70-126 71-123 (575)
168 cd07313 terB_like_2 tellurium 35.8 1.4E+02 0.003 20.3 5.7 81 80-178 12-93 (104)
169 PTZ00373 60S Acidic ribosomal 35.3 1.4E+02 0.0029 21.4 5.3 40 107-159 6-45 (112)
170 cd02977 ArsC_family Arsenate R 31.4 1.2E+02 0.0026 20.8 4.6 29 163-191 63-91 (105)
171 PRK12461 UDP-N-acetylglucosami 30.5 2.2E+02 0.0048 23.3 6.6 57 20-82 196-252 (255)
172 cd05833 Ribosomal_P2 Ribosomal 30.2 1.8E+02 0.0039 20.6 5.3 54 107-182 4-57 (109)
173 PF06919 Phage_T4_Gp30_7: Phag 30.0 1.5E+02 0.0032 20.9 4.6 21 147-167 100-120 (121)
174 PF02864 STAT_bind: STAT prote 29.9 93 0.002 25.7 4.2 54 120-182 178-232 (254)
175 KOG1785 Tyrosine kinase negati 29.7 3.7E+02 0.008 23.9 7.8 81 46-130 188-272 (563)
176 PF04876 Tenui_NCP: Tenuivirus 29.0 2.6E+02 0.0056 21.2 8.1 77 68-161 84-160 (175)
177 KOG3449 60S acidic ribosomal p 28.6 2.2E+02 0.0048 20.3 5.3 41 106-159 3-43 (112)
178 KOG4004 Matricellular protein 28.5 29 0.00064 27.5 1.0 59 35-95 192-250 (259)
179 KOG3442 Uncharacterized conser 28.3 1.2E+02 0.0026 22.2 4.0 47 116-176 51-97 (132)
180 cd07176 terB tellurite resista 27.3 1.7E+02 0.0036 19.9 4.8 79 45-126 15-99 (111)
181 PF05920 Homeobox_KN: Homeobox 27.0 68 0.0015 18.2 2.2 22 13-34 14-35 (40)
182 PLN02222 phosphoinositide phos 26.9 2.6E+02 0.0057 26.1 7.0 65 23-94 21-89 (581)
183 COG1393 ArsC Arsenate reductas 26.9 1.5E+02 0.0032 21.2 4.4 44 162-206 64-107 (117)
184 PLN02230 phosphoinositide phos 26.5 2.3E+02 0.0049 26.7 6.5 61 65-126 27-96 (598)
185 KOG1785 Tyrosine kinase negati 25.2 3.6E+02 0.0078 24.0 7.0 56 69-126 177-232 (563)
186 KOG1954 Endocytosis/signaling 25.0 1.4E+02 0.0031 26.4 4.6 56 107-182 447-502 (532)
187 cd03034 ArsC_ArsC Arsenate Red 24.9 1.8E+02 0.004 20.3 4.6 27 164-191 64-90 (112)
188 PF03979 Sigma70_r1_1: Sigma-7 24.9 1.6E+02 0.0034 19.5 4.0 35 45-80 18-52 (82)
189 PF09107 SelB-wing_3: Elongati 24.7 1.7E+02 0.0036 17.6 5.2 32 45-80 7-38 (50)
190 PF05872 DUF853: Bacterial pro 24.3 3.4E+02 0.0074 24.7 6.9 119 48-192 105-233 (502)
191 PF03672 UPF0154: Uncharacteri 24.2 2E+02 0.0044 18.3 4.3 31 117-160 28-58 (64)
192 PRK03095 prsA peptidylprolyl i 23.8 4.3E+02 0.0093 22.0 8.4 16 80-95 31-46 (287)
193 cd03033 ArsC_15kD Arsenate Red 23.6 1.4E+02 0.0031 21.1 3.8 21 172-192 70-90 (113)
194 PF04783 DUF630: Protein of un 23.3 61 0.0013 20.4 1.6 10 1-10 1-10 (60)
195 KOG1265 Phospholipase C [Lipid 23.2 7.6E+02 0.017 24.7 10.7 73 52-126 208-293 (1189)
196 PF04558 tRNA_synt_1c_R1: Glut 23.2 3.4E+02 0.0075 20.7 6.6 51 101-165 82-132 (164)
197 PF07879 PHB_acc_N: PHB/PHA ac 22.3 71 0.0015 20.4 1.7 16 111-126 10-25 (64)
198 KOG0506 Glutaminase (contains 22.3 3.3E+02 0.0071 24.9 6.4 73 105-191 87-164 (622)
199 PRK00523 hypothetical protein; 22.2 2.4E+02 0.0052 18.5 4.2 32 117-161 36-67 (72)
200 PF09373 PMBR: Pseudomurein-bi 21.9 94 0.002 16.7 2.0 21 171-191 2-22 (33)
201 cd03032 ArsC_Spx Arsenate Redu 21.8 2.9E+02 0.0063 19.3 5.5 27 164-191 65-91 (115)
202 PF02761 Cbl_N2: CBL proto-onc 21.3 2.7E+02 0.0059 18.8 7.7 54 45-98 19-73 (85)
203 cd06404 PB1_aPKC PB1 domain is 21.3 2.4E+02 0.0053 19.0 4.2 39 83-121 19-76 (83)
204 PF05559 DUF763: Protein of un 21.2 1.2E+02 0.0027 25.8 3.5 47 2-48 89-135 (319)
205 PF13608 Potyvirid-P3: Protein 20.8 1.4E+02 0.0031 26.8 4.0 50 45-94 301-354 (445)
206 cd08327 CARD_RAIDD Caspase act 20.8 2.7E+02 0.0058 19.1 4.6 55 117-193 32-86 (94)
No 1
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-26 Score=178.59 Aligned_cols=179 Identities=41% Similarity=0.638 Sum_probs=158.4
Q ss_pred CCccccccccCchhHHHHHhhCC----CCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHH
Q 041619 1 MGCVCMKQRLKSVNHAALAAQTH----FKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLF 76 (222)
Q Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~----~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~ 76 (222)
||+..|+... .++.+.++..+. |+.+||..|+.+|.+++.+. +.|+++.++|..+. ....++..+++++.+
T Consensus 1 Mg~~~s~~~~-~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~-~~g~lt~eef~~i~---~~~~Np~~~rI~~~f 75 (187)
T KOG0034|consen 1 MGNLSSTLLS-DEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN-GDGYLTKEEFLSIP---ELALNPLADRIIDRF 75 (187)
T ss_pred CCcccccccc-hhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc-ccCccCHHHHHHHH---HHhcCcHHHHHHHHH
Confidence 8988887633 377888888888 99999999999999999864 78999999999887 345677889999999
Q ss_pred hcCCCCc-ccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCC--CHH
Q 041619 77 DLKRDGG-IEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLIL--SDD 153 (222)
Q Consensus 77 d~~~~g~-i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~--~~~ 153 (222)
+.+++|. |+|++|+..++.+.+.....++++++|++||.+++|+|+++|+ ..++..+. |... +++
T Consensus 76 ~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel---------~~iv~~~~---~~~~~~~~e 143 (187)
T KOG0034|consen 76 DTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREEL---------KQILRMMV---GENDDMSDE 143 (187)
T ss_pred hccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHH---------HHHHHHHH---ccCCcchHH
Confidence 9999988 9999999999999988888889999999999999999999999 66666555 3334 489
Q ss_pred HHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhcCcc
Q 041619 154 IIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIP 196 (222)
Q Consensus 154 ~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~~~~ 196 (222)
.++.+++.+|.++|.++||.|+++||.+++.+.|.+.++++++
T Consensus 144 ~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~m~~~ 186 (187)
T KOG0034|consen 144 QLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEKMTIR 186 (187)
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHHcCCC
Confidence 9999999999999999999999999999999999999988654
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.93 E-value=6.8e-25 Score=165.30 Aligned_cols=151 Identities=27% Similarity=0.460 Sum_probs=138.7
Q ss_pred HHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 041619 18 LAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIF 96 (222)
Q Consensus 18 ~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~ 96 (222)
+...+.|+.+++++++++|..+|.+ ++|.|++.+|..++..+|.. +..++.+++..+|. +++.|+|.+|+.++...
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d--~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~ 84 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRD--SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVK 84 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcC--CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHH
Confidence 5667889999999999999999999 99999999999999888765 77889999999999 88999999999999999
Q ss_pred CCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCH
Q 041619 97 HPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDP 176 (222)
Q Consensus 97 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~ 176 (222)
......+++++.+|++||+|++|+|+..+| +.++..+ |..+++++++.++ ..+|.|++|.|+|
T Consensus 85 ~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL---------~~vl~~l----ge~~~deev~~ll----~~~d~d~dG~i~~ 147 (160)
T COG5126 85 LKRGDKEEELREAFKLFDKDHDGYISIGEL---------RRVLKSL----GERLSDEEVEKLL----KEYDEDGDGEIDY 147 (160)
T ss_pred hccCCcHHHHHHHHHHhCCCCCceecHHHH---------HHHHHhh----cccCCHHHHHHHH----HhcCCCCCceEeH
Confidence 888889999999999999999999999999 7766544 9999999998888 8999999999999
Q ss_pred HHHHHHHhhChh
Q 041619 177 EEWKEFVARNPS 188 (222)
Q Consensus 177 eeF~~~~~~~~~ 188 (222)
++|.+.+...|.
T Consensus 148 ~eF~~~~~~~~~ 159 (160)
T COG5126 148 EEFKKLIKDSPT 159 (160)
T ss_pred HHHHHHHhccCC
Confidence 999999887764
No 3
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.93 E-value=7.4e-25 Score=170.49 Aligned_cols=179 Identities=30% Similarity=0.443 Sum_probs=153.0
Q ss_pred CCcc-ccccccCchhHHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc--CcchHHHHHHHHHHh
Q 041619 1 MGCV-CMKQRLKSVNHAALAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNH--KKQSLIADRVFQLFD 77 (222)
Q Consensus 1 Mg~~-~s~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d 77 (222)
||.. .++++. +.++++...++|+++|+..++.-|...+ ++|.++.++|+.++.... ..+..+++.+|+.+|
T Consensus 1 m~~~~~~~~~~--~~~e~l~~~t~f~~~ei~~~Yr~Fk~~c----P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD 74 (193)
T KOG0044|consen 1 MGKKSNSKLQP--ESLEQLVQQTKFSKKEIQQWYRGFKNEC----PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFD 74 (193)
T ss_pred CCccccccCCc--HHHHHHHHhcCCCHHHHHHHHHHhcccC----CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhc
Confidence 6755 666655 8899999999999999999999999977 789999999999887754 347788999999999
Q ss_pred cCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCHHH
Q 041619 78 LKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDL---ILSDDI 154 (222)
Q Consensus 78 ~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~---~~~~~~ 154 (222)
.+++|.|+|.||+.+++..+ .+..++++.++|++||.||+|+|+++|+-+++ .+++...|. ...+.-
T Consensus 75 ~~~dg~i~F~Efi~als~~~-rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv---------~~i~~m~~~~~~~~~~~~ 144 (193)
T KOG0044|consen 75 KNKDGTIDFLEFICALSLTS-RGTLEEKLKWAFRLYDLDGDGYITKEEMLKIV---------QAIYQMTGSKALPEDEET 144 (193)
T ss_pred ccCCCCcCHHHHHHHHHHHc-CCcHHHHhhhhheeecCCCCceEcHHHHHHHH---------HHHHHHcccccCCccccc
Confidence 99999999999999999999 78999999999999999999999999995555 333333342 122344
Q ss_pred HHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhcCc
Q 041619 155 IEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTI 195 (222)
Q Consensus 155 i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~~~ 195 (222)
.++.+..+|..+|.|+||.||++||...+...|.+++.++.
T Consensus 145 ~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~ 185 (193)
T KOG0044|consen 145 PEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALEQ 185 (193)
T ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhhh
Confidence 56667888999999999999999999999999999998753
No 4
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-20 Score=143.75 Aligned_cols=143 Identities=29% Similarity=0.452 Sum_probs=126.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCc
Q 041619 24 FKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPH 102 (222)
Q Consensus 24 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~ 102 (222)
++..++..+..+|+.+|++ ++|+|+..++..++..++.. ....+..++..+|.+++|.|+|.+|+.++.........
T Consensus 2 ~~~~~~~el~~~F~~fD~d--~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKD--GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTD 79 (151)
T ss_pred CCHHHHHHHHHHHHHHCCC--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccc
Confidence 5678899999999999999 99999999999999998876 56788999999999999999999999999876543333
Q ss_pred ----HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHH
Q 041619 103 ----AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEE 178 (222)
Q Consensus 103 ----~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~ee 178 (222)
.+.++.+|+.||+|++|+|+.+|| +.++..+ |...+.++++.++ +.+|.|+||.|+|++
T Consensus 80 ~~~~~~el~eaF~~fD~d~~G~Is~~el---------~~~l~~l----g~~~~~~e~~~mi----~~~d~d~dg~i~f~e 142 (151)
T KOG0027|consen 80 EEASSEELKEAFRVFDKDGDGFISASEL---------KKVLTSL----GEKLTDEECKEMI----REVDVDGDGKVNFEE 142 (151)
T ss_pred ccccHHHHHHHHHHHccCCCCcCcHHHH---------HHHHHHh----CCcCCHHHHHHHH----HhcCCCCCCeEeHHH
Confidence 459999999999999999999999 7766655 8899999998877 899999999999999
Q ss_pred HHHHHhh
Q 041619 179 WKEFVAR 185 (222)
Q Consensus 179 F~~~~~~ 185 (222)
|++++..
T Consensus 143 f~~~m~~ 149 (151)
T KOG0027|consen 143 FVKMMSG 149 (151)
T ss_pred HHHHHhc
Confidence 9998864
No 5
>PTZ00183 centrin; Provisional
Probab=99.85 E-value=8.9e-20 Score=139.04 Aligned_cols=149 Identities=23% Similarity=0.360 Sum_probs=129.8
Q ss_pred hCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 041619 21 QTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPE 99 (222)
Q Consensus 21 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~ 99 (222)
..++++.++.++...|..+|.+ ++|.|+..+|..++...+.. ....+..++..+|.+++|.|+|.+|+.++......
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 85 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTD--GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE 85 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC
Confidence 3468999999999999999999 99999999999999877653 56678999999999999999999999988765545
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
......++.+|+.+|.+++|.|+.+|| ..++..+ |..++++++..++ ..+|.+++|.|++++|
T Consensus 86 ~~~~~~l~~~F~~~D~~~~G~i~~~e~---------~~~l~~~----~~~l~~~~~~~~~----~~~d~~~~g~i~~~ef 148 (158)
T PTZ00183 86 RDPREEILKAFRLFDDDKTGKISLKNL---------KRVAKEL----GETITDEELQEMI----DEADRNGDGEISEEEF 148 (158)
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHH---------HHHHHHh----CCCCCHHHHHHHH----HHhCCCCCCcCcHHHH
Confidence 566788999999999999999999999 7666544 7789998886555 8999999999999999
Q ss_pred HHHHhhChh
Q 041619 180 KEFVARNPS 188 (222)
Q Consensus 180 ~~~~~~~~~ 188 (222)
..++...|.
T Consensus 149 ~~~~~~~~~ 157 (158)
T PTZ00183 149 YRIMKKTNL 157 (158)
T ss_pred HHHHhcccC
Confidence 999988775
No 6
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.84 E-value=7.4e-20 Score=133.41 Aligned_cols=176 Identities=26% Similarity=0.419 Sum_probs=146.8
Q ss_pred CCccccccccCchhHHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCC---------cccHHHHHHHHhhccCcchHHHHH
Q 041619 1 MGCVCMKQRLKSVNHAALAAQTHFKETEIEILYLLFKKLSSSLVDDG---------IISKEEFQLGLFKNHKKQSLIADR 71 (222)
Q Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G---------~i~~~ef~~~l~~~~~~~~~~~~~ 71 (222)
|||.+.--.. ++++.++.++-||..+|.+++..|..+.++.++.. .++.+... ....+...+.-++
T Consensus 1 MGNK~~vFT~--eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~---kMPELkenpfk~r 75 (189)
T KOG0038|consen 1 MGNKQTVFTE--EQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE---KMPELKENPFKRR 75 (189)
T ss_pred CCCccceeeH--HHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh---hChhhhcChHHHH
Confidence 8987776666 99999999999999999999999999977544432 22222222 1122345567789
Q ss_pred HHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041619 72 VFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILS 151 (222)
Q Consensus 72 lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~ 151 (222)
+...+..++.|-++|++|+.+++.++..++..-++..+|+.||-|+++.|..+++ ...+.++- ...++
T Consensus 76 i~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL---------~~~l~~lT---r~eLs 143 (189)
T KOG0038|consen 76 ICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDL---------EKTLTSLT---RDELS 143 (189)
T ss_pred HHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHH---------HHHHHHHh---hccCC
Confidence 9999999999999999999999999977788889999999999999999999999 66665543 34689
Q ss_pred HHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhc
Q 041619 152 DDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNM 193 (222)
Q Consensus 152 ~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~ 193 (222)
+++++.+.+.+..++|.||||++++.||..++.+.|+++..+
T Consensus 144 ~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPDFlsTF 185 (189)
T KOG0038|consen 144 DEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAPDFLSTF 185 (189)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcchHhhh
Confidence 999999999999999999999999999999999999998754
No 7
>PTZ00184 calmodulin; Provisional
Probab=99.83 E-value=9.3e-19 Score=131.84 Aligned_cols=144 Identities=24% Similarity=0.418 Sum_probs=124.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAP 101 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~ 101 (222)
.++++++..+...|..+|.+ ++|.|+.++|..++...+.. ....+..++..+|.+++|.|+|++|+.++........
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~ 81 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD 81 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence 47889999999999999999 99999999999988766543 4567899999999999999999999999887654556
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 102 HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 102 ~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
....+..+|+.+|.+++|.|+.+|+ +.++..+ |..++.++++.++ ..+|.+++|.|+|+||..
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~---------~~~l~~~----~~~~~~~~~~~~~----~~~d~~~~g~i~~~ef~~ 144 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAEL---------RHVMTNL----GEKLTDEEVDEMI----READVDGDGQINYEEFVK 144 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHH---------HHHHHHH----CCCCCHHHHHHHH----HhcCCCCCCcCcHHHHHH
Confidence 6788999999999999999999999 7666544 7778888886655 899999999999999998
Q ss_pred HHhh
Q 041619 182 FVAR 185 (222)
Q Consensus 182 ~~~~ 185 (222)
++..
T Consensus 145 ~~~~ 148 (149)
T PTZ00184 145 MMMS 148 (149)
T ss_pred HHhc
Confidence 8753
No 8
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=2.4e-18 Score=127.50 Aligned_cols=148 Identities=24% Similarity=0.363 Sum_probs=131.0
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
....+++++-+.++..|..++.+ ++|+|+..+|..++..+|.. ....+..+...+|++++|.|+|++|+..+.....
T Consensus 23 ~~~~l~~~q~q~i~e~f~lfd~~--~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 23 PKSELTEEQKQEIKEAFELFDPD--MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred CCccccHHHHhhHHHHHHhhccC--CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 34567888889999999999988 99999999998888888765 5567789999999999999999999999887776
Q ss_pred CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHH
Q 041619 99 EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEE 178 (222)
Q Consensus 99 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~ee 178 (222)
...+.+.+..+|+++|.|++|.|++.+| +.+... +|+.++++++.++| .++|.+++|.|+-++
T Consensus 101 e~dt~eEi~~afrl~D~D~~Gkis~~~l---------krvake----LgenltD~El~eMI----eEAd~d~dgevneeE 163 (172)
T KOG0028|consen 101 ERDTKEEIKKAFRLFDDDKTGKISQRNL---------KRVAKE----LGENLTDEELMEMI----EEADRDGDGEVNEEE 163 (172)
T ss_pred ccCcHHHHHHHHHcccccCCCCcCHHHH---------HHHHHH----hCccccHHHHHHHH----HHhcccccccccHHH
Confidence 7779999999999999999999999999 665444 49999999999999 899999999999999
Q ss_pred HHHHHhhC
Q 041619 179 WKEFVARN 186 (222)
Q Consensus 179 F~~~~~~~ 186 (222)
|...+..-
T Consensus 164 F~~imk~t 171 (172)
T KOG0028|consen 164 FIRIMKKT 171 (172)
T ss_pred HHHHHhcC
Confidence 99988653
No 9
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.73 E-value=4.5e-16 Score=114.69 Aligned_cols=139 Identities=19% Similarity=0.314 Sum_probs=123.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAP 101 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~ 101 (222)
-|++.+|++++.+|..+|.+ ++|.|+.++++..+..+|.. ++.++..++.. .+|.|+|.-|+.++........
T Consensus 25 mf~q~QIqEfKEAF~~mDqn--rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtd 98 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQN--RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTD 98 (171)
T ss_pred HhhHHHHHHHHHHHHHHhcc--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCC
Confidence 48999999999999999999 99999999999999888765 56666776654 5789999999999987776788
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 102 HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 102 ~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
+++-+..+|+.||.+++|.|..+.| +.+|... |..+++++++.++ +.+-++..|.++|..|..
T Consensus 99 pe~~I~~AF~~FD~~~~G~I~~d~l---------re~Ltt~----gDr~~~eEV~~m~----r~~p~d~~G~~dy~~~~~ 161 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDEGSGKIDEDYL---------RELLTTM----GDRFTDEEVDEMY----REAPIDKKGNFDYKAFTY 161 (171)
T ss_pred HHHHHHHHHHhcCccCCCccCHHHH---------HHHHHHh----cccCCHHHHHHHH----HhCCcccCCceeHHHHHH
Confidence 8999999999999999999999999 8877664 9999999997776 888899999999999999
Q ss_pred HHh
Q 041619 182 FVA 184 (222)
Q Consensus 182 ~~~ 184 (222)
.+.
T Consensus 162 ~it 164 (171)
T KOG0031|consen 162 IIT 164 (171)
T ss_pred HHH
Confidence 875
No 10
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.70 E-value=2.9e-16 Score=122.34 Aligned_cols=155 Identities=20% Similarity=0.312 Sum_probs=129.0
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc--chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHH
Q 041619 29 IEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKV 106 (222)
Q Consensus 29 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~ 106 (222)
-..+...|...|.+ +.|.|+.+|++.+|-..... ....|+.|..++|.+.+|+|+|+||..+|..+. .|
T Consensus 56 ~~~~~~~f~~vD~d--~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~-------~W 126 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRD--RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN-------QW 126 (221)
T ss_pred cHHHHHHHHhhCcc--ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH-------HH
Confidence 45788889999999 99999999999998644332 667899999999999999999999999997664 89
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhC
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~ 186 (222)
+.+|+.||.|++|.|+..|| +.+|..+ |..++++-.+.++ +.+|..+.|.|.+++|+.++...
T Consensus 127 r~vF~~~D~D~SG~I~~sEL---------~~Al~~~----Gy~Lspq~~~~lv----~kyd~~~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGTIDSSEL---------RQALTQL----GYRLSPQFYNLLV----RKYDRFGGGRIDFDDFIQCCVVL 189 (221)
T ss_pred HHHHHhcccCCCCcccHHHH---------HHHHHHc----CcCCCHHHHHHHH----HHhccccCCceeHHHHHHHHHHH
Confidence 99999999999999999999 8876655 9999999887777 88898889999999999999887
Q ss_pred hhhhhhc---CcccchhhhccCCCcc
Q 041619 187 PSLLKNM---TIPYLKDITTAFPSFV 209 (222)
Q Consensus 187 ~~~~~~~---~~~~~~~~~~~~~~f~ 209 (222)
+.+.+.+ .....+..+.+|..|+
T Consensus 190 ~~lt~~Fr~~D~~q~G~i~~~y~dfl 215 (221)
T KOG0037|consen 190 QRLTEAFRRRDTAQQGSITISYDDFL 215 (221)
T ss_pred HHHHHHHHHhccccceeEEEeHHHHH
Confidence 7765533 3344555555555554
No 11
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.58 E-value=6.1e-14 Score=118.33 Aligned_cols=142 Identities=28% Similarity=0.439 Sum_probs=122.7
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc--chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 041619 22 THFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPE 99 (222)
Q Consensus 22 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~ 99 (222)
...+++.-.++...|+.+|.+ ++|.++..++.+.+..+... +...+..+|..+|.|.+|.++|+||..++.
T Consensus 6 ~~~~~er~~r~~~lf~~lD~~--~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~----- 78 (463)
T KOG0036|consen 6 RETDEERDIRIRCLFKELDSK--NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD----- 78 (463)
T ss_pred cCCcHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----
Confidence 345666677888999999998 99999999999888766543 556788999999999999999999999986
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
..+.++..+|+.+|.++||.|..+|+ ...+..+ |..+++++++.++ +..|.++.+.|+++||
T Consensus 79 -~~E~~l~~~F~~iD~~hdG~i~~~Ei---------~~~l~~~----gi~l~de~~~k~~----e~~d~~g~~~I~~~e~ 140 (463)
T KOG0036|consen 79 -NKELELYRIFQSIDLEHDGKIDPNEI---------WRYLKDL----GIQLSDEKAAKFF----EHMDKDGKATIDLEEW 140 (463)
T ss_pred -HhHHHHHHHHhhhccccCCccCHHHH---------HHHHHHh----CCccCHHHHHHHH----HHhccCCCeeeccHHH
Confidence 56678999999999999999999999 6655444 9999999986655 8999999999999999
Q ss_pred HHHHhhChh
Q 041619 180 KEFVARNPS 188 (222)
Q Consensus 180 ~~~~~~~~~ 188 (222)
...+..+|.
T Consensus 141 rd~~ll~p~ 149 (463)
T KOG0036|consen 141 RDHLLLYPE 149 (463)
T ss_pred HhhhhcCCh
Confidence 999999883
No 12
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.58 E-value=8e-14 Score=101.19 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcc-hHHHHHHHHHHhcC--CCCcccHHHHHHHHHhhCCC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQ-SLIADRVFQLFDLK--RDGGIEFEEFVRSLSIFHPE 99 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~--~~g~i~f~eF~~~~~~~~~~ 99 (222)
.++++...+++.+|..+|.. ++|.|+..+....|+.+|..| +..+.+.....+.+ +-.+++|++|+.+++.+.+.
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~--gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn 81 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRT--GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN 81 (152)
T ss_pred ccCcchHHHHHHHHHHHhcc--CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 46677778888889888888 999999999999998888664 44566666666555 34689999999999887753
Q ss_pred C--CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHH
Q 041619 100 A--PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPE 177 (222)
Q Consensus 100 ~--~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~e 177 (222)
. -.-+.....++.||++++|.|...|| +++|.++ |..+++++++.++ ..-.|.+|.|.|+
T Consensus 82 k~q~t~edfvegLrvFDkeg~G~i~~aeL---------RhvLttl----Gekl~eeEVe~Ll-----ag~eD~nG~i~YE 143 (152)
T KOG0030|consen 82 KDQGTYEDFVEGLRVFDKEGNGTIMGAEL---------RHVLTTL----GEKLTEEEVEELL-----AGQEDSNGCINYE 143 (152)
T ss_pred cccCcHHHHHHHHHhhcccCCcceeHHHH---------HHHHHHH----HhhccHHHHHHHH-----ccccccCCcCcHH
Confidence 3 34566777899999999999999999 7776666 9999999999888 4556778999999
Q ss_pred HHHHHHh
Q 041619 178 EWKEFVA 184 (222)
Q Consensus 178 eF~~~~~ 184 (222)
.|++.+.
T Consensus 144 ~fVk~i~ 150 (152)
T KOG0030|consen 144 AFVKHIM 150 (152)
T ss_pred HHHHHHh
Confidence 9998764
No 13
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.37 E-value=2.3e-12 Score=84.00 Aligned_cols=66 Identities=30% Similarity=0.588 Sum_probs=58.2
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
+++.+|+.+|+|++|+|+.+|| +.++..+ +...++..+..+++.+|..+|+|++|.|+++||++++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEEL---------RRALKHL----GRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHH---------HHHHHHT----TSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHH---------HHHHHHh----cccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999 6665544 6667788898999999999999999999999999875
No 14
>PLN02964 phosphatidylserine decarboxylase
Probab=99.35 E-value=1.6e-11 Score=111.45 Aligned_cols=112 Identities=19% Similarity=0.262 Sum_probs=94.3
Q ss_pred chhHHHHHhh--CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc-Ccch-H---HHHHHHHHHhcCCCCcc
Q 041619 12 SVNHAALAAQ--THFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNH-KKQS-L---IADRVFQLFDLKRDGGI 84 (222)
Q Consensus 12 ~~~~~~~~~~--~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~~~-~---~~~~lf~~~d~~~~g~i 84 (222)
+.++..++.. +.|+.+|+.+++..|+.+|++ ++|.+ +..++..++ ..+. . +++.+|..+|.+++|.|
T Consensus 123 ~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~d--gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~I 196 (644)
T PLN02964 123 KNTLVGYCELDLFDFVTQEPESACESFDLLDPS--SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQL 196 (644)
T ss_pred HHHhhhheeecHhhccHHHHHHHHHHHHHHCCC--CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeE
Confidence 3778888877 899999999999999999999 99987 555555555 2322 2 37899999999999999
Q ss_pred cHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 041619 85 EFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVI 130 (222)
Q Consensus 85 ~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~ 130 (222)
+|+||+.++..+. ....+++++.+|+.||+|++|.|+.+||+.++
T Consensus 197 dfdEFl~lL~~lg-~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL 241 (644)
T PLN02964 197 SFSEFSDLIKAFG-NLVAANKKEELFKAADLNGDGVVTIDELAALL 241 (644)
T ss_pred cHHHHHHHHHHhc-cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 9999999998765 55678889999999999999999999994444
No 15
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.23 E-value=7.1e-11 Score=97.31 Aligned_cols=136 Identities=24% Similarity=0.303 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc--chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC---
Q 041619 27 TEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAP--- 101 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~--- 101 (222)
+.+..-...|+..|.+ ++|.++.+||..+|...... ....+...+.-.|+|++|.|+++||+.-+....+...
T Consensus 160 km~~rDe~rFk~AD~d--~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epe 237 (325)
T KOG4223|consen 160 KMIARDEERFKAADQD--GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPE 237 (325)
T ss_pred HHHHHHHHHHhhcccC--CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcc
Confidence 3577778889999999 99999999999888543322 4556788889999999999999999987665442111
Q ss_pred -cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHH
Q 041619 102 -HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWK 180 (222)
Q Consensus 102 -~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~ 180 (222)
...+-.+.+...|+|++|+++.+|+ +.++.- .+......+..-++ .+.|.|+||++|++|.+
T Consensus 238 Wv~~Ere~F~~~~DknkDG~L~~dEl---------~~WI~P----~~~d~A~~EA~hL~----~eaD~dkD~kLs~eEIl 300 (325)
T KOG4223|consen 238 WVLTEREQFFEFRDKNKDGKLDGDEL---------LDWILP----SEQDHAKAEARHLL----HEADEDKDGKLSKEEIL 300 (325)
T ss_pred cccccHHHHHHHhhcCCCCccCHHHH---------hcccCC----CCccHHHHHHHHHh----hhhccCccccccHHHHh
Confidence 2234567889999999999999999 665421 13334445554444 89999999999999976
Q ss_pred H
Q 041619 181 E 181 (222)
Q Consensus 181 ~ 181 (222)
.
T Consensus 301 ~ 301 (325)
T KOG4223|consen 301 E 301 (325)
T ss_pred h
Confidence 4
No 16
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.16 E-value=9e-10 Score=83.65 Aligned_cols=106 Identities=29% Similarity=0.366 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhc
Q 041619 67 LIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKES 146 (222)
Q Consensus 67 ~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~ 146 (222)
.....+|..+|.+++|.|+-.++-.++..+. ..+....+..++..+|.+++|.|+.+|| ..++.......
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg-~~~t~~el~~~~~~~D~dg~g~I~~~eF---------~~l~~~~~~~~ 77 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLG-QNPTEEELRDLIKEIDLDGDGTIDFEEF---------LDLMEKLGEEK 77 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCCeEcHHHH---------HHHHHhhhccc
Confidence 4568899999999999999999999998887 6678999999999999999999999999 66554432111
Q ss_pred CCC-CCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhC
Q 041619 147 DLI-LSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 147 g~~-~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~ 186 (222)
... .+.+++ ..+|+.+|.|++|.||.+|+.+++...
T Consensus 78 ~~~~~~~~el----~eaF~~fD~d~~G~Is~~el~~~l~~l 114 (151)
T KOG0027|consen 78 TDEEASSEEL----KEAFRVFDKDGDGFISASELKKVLTSL 114 (151)
T ss_pred ccccccHHHH----HHHHHHHccCCCCcCcHHHHHHHHHHh
Confidence 111 123344 667799999999999999999998653
No 17
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.12 E-value=2.5e-10 Score=78.66 Aligned_cols=69 Identities=20% Similarity=0.289 Sum_probs=56.2
Q ss_pred HHHHHHhhhhcC-CCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 104 EKVSFAFQLFDV-SQTGFIEREEVKGVILTLLVKEMILALLKESDLILSD-DIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 104 ~~~~~~F~~~D~-d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~-~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
..+..+|+.||. +++|+|+..|| +.++..- +|..+++ +++++++ ..+|.|+||.|+|+||..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~EL---------k~ll~~e---lg~~ls~~~~v~~mi----~~~D~d~DG~I~F~EF~~ 71 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEF---------QELLTQQ---LPHLLKDVEGLEEKM----KNLDVNQDSKLSFEEFWE 71 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHH---------HHHHHHH---hhhhccCHHHHHHHH----HHhCCCCCCCCcHHHHHH
Confidence 467899999999 99999999999 6666541 2655676 7776666 899999999999999999
Q ss_pred HHhhChh
Q 041619 182 FVARNPS 188 (222)
Q Consensus 182 ~~~~~~~ 188 (222)
++.....
T Consensus 72 l~~~l~~ 78 (89)
T cd05022 72 LIGELAK 78 (89)
T ss_pred HHHHHHH
Confidence 8866543
No 18
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.11 E-value=9.8e-10 Score=93.87 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=107.0
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhc---cCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-----
Q 041619 29 IEILYLLFKKLSSSLVDDGIISKEEFQLGLFKN---HKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA----- 100 (222)
Q Consensus 29 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~---~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~----- 100 (222)
-.+|.+.|.++|.. ++|+|+...++.++... +++...... +....+.+|.|.|.+.+..+..-....
T Consensus 463 ~sdL~~eF~~~D~~--ksG~lsis~Wa~~mE~i~~L~LPWr~L~~---kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~s 537 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPK--KSGKLSISHWAKCMENITGLNLPWRLLRP---KLANGSDDGKVEYKSTLDNLDTEVILEEAGSS 537 (631)
T ss_pred hhHHHHHHHhcChh--hcCeeeHHHHHHHHHHHhcCCCcHHHhhh---hccCCCcCcceehHhHHHHhhhhhHHHHHHhH
Confidence 34577889999998 99999999999887553 333222222 233445678899988887765322111
Q ss_pred ------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCcc
Q 041619 101 ------PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKI 174 (222)
Q Consensus 101 ------~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~I 174 (222)
.....++.+|+.+|.|++|.|+.+|| ++++.-+.+.+...+++.++.++. +.+|.|+||.|
T Consensus 538 lvetLYr~ks~LetiF~~iD~D~SG~isldEF---------~~a~~l~~sh~~~~i~~~~i~~la----~~mD~NkDG~I 604 (631)
T KOG0377|consen 538 LVETLYRNKSSLETIFNIIDADNSGEISLDEF---------RTAWKLLSSHMNGAISDDEILELA----RSMDLNKDGKI 604 (631)
T ss_pred HHHHHHhchhhHHHHHHHhccCCCCceeHHHH---------HHHHHHHHhhcCCCcCHHHHHHHH----HhhccCCCCcc
Confidence 13345788999999999999999999 888776666677788999998888 89999999999
Q ss_pred CHHHHHHHHhhChh
Q 041619 175 DPEEWKEFVARNPS 188 (222)
Q Consensus 175 s~eeF~~~~~~~~~ 188 (222)
++.||+..++....
T Consensus 605 DlNEfLeAFrlvdr 618 (631)
T KOG0377|consen 605 DLNEFLEAFRLVDR 618 (631)
T ss_pred cHHHHHHHHhhhcc
Confidence 99999998865443
No 19
>PTZ00183 centrin; Provisional
Probab=99.11 E-value=2.2e-09 Score=81.41 Aligned_cols=102 Identities=24% Similarity=0.249 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhc
Q 041619 67 LIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKES 146 (222)
Q Consensus 67 ~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~ 146 (222)
..+..+|..+|.+++|.|++.+|..++.... .......+..+|..+|.+++|.|+.+|| ..++....
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~~~~~~~~~~l~~~~d~~~~g~i~~~eF---------~~~~~~~~--- 83 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-FEPKKEEIKQMIADVDKDGSGKIDFEEF---------LDIMTKKL--- 83 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCcEeHHHH---------HHHHHHHh---
Confidence 3457889999999999999999999988664 3456678999999999999999999999 55543321
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 147 DLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 147 g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
........+ +.+|..+|.+++|.|+.+||..++..
T Consensus 84 ~~~~~~~~l----~~~F~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 84 GERDPREEI----LKAFRLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred cCCCcHHHH----HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 222333344 66679999999999999999999875
No 20
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.06 E-value=4.7e-09 Score=79.55 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=94.0
Q ss_pred HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 041619 68 IADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESD 147 (222)
Q Consensus 68 ~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g 147 (222)
.++..|..+|.+++|.|+..++..+++ ..+...+...+..+|..+|. ++|.|+..+| -.++.... .
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr-~lg~~~s~~ei~~l~~~~d~-~~~~idf~~F---------l~~ms~~~---~ 86 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILR-SLGFNPSEAEINKLFEEIDA-GNETVDFPEF---------LTVMSVKL---K 86 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHH-HcCCCCcHHHHHHHHHhccC-CCCccCHHHH---------HHHHHHHh---c
Confidence 457889999999999999999999998 45588899999999999999 9999999999 66554332 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChh-----hhhhc--CcccchhhhccCCCcc
Q 041619 148 LILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPS-----LLKNM--TIPYLKDITTAFPSFV 209 (222)
Q Consensus 148 ~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~f~ 209 (222)
...+++++ .++|+.+|.|++|.|+..+++.++...-. .+..+ .++.-+++...|..|+
T Consensus 87 ~~~~~Eel----~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~ 151 (160)
T COG5126 87 RGDKEEEL----REAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFK 151 (160)
T ss_pred cCCcHHHH----HHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHH
Confidence 33445665 67779999999999999999999974222 11221 3344455555555554
No 21
>PTZ00184 calmodulin; Provisional
Probab=99.05 E-value=4.4e-09 Score=78.80 Aligned_cols=101 Identities=22% Similarity=0.303 Sum_probs=80.2
Q ss_pred HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 041619 68 IADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESD 147 (222)
Q Consensus 68 ~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g 147 (222)
.....|..+|.+++|.|++.+|..++.... .....+.+..+|..+|.+++|.|+.+|| ..++.... .
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef---------~~~l~~~~---~ 78 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEF---------LTLMARKM---K 78 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCcCCCCcCcHHHH---------HHHHHHhc---c
Confidence 346889999999999999999999887665 3455778999999999999999999999 66554322 1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 148 LILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 148 ~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
.....+. +..+|..+|.+++|.|+.++|..++..
T Consensus 79 ~~~~~~~----~~~~F~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 79 DTDSEEE----IKEAFKVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred CCcHHHH----HHHHHHhhCCCCCCeEeHHHHHHHHHH
Confidence 1122223 366779999999999999999998854
No 22
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.04 E-value=2.9e-09 Score=87.90 Aligned_cols=142 Identities=25% Similarity=0.324 Sum_probs=105.2
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC------CCC-
Q 041619 29 IEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH------PEA- 100 (222)
Q Consensus 29 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~------~~~- 100 (222)
-.++...+.++|.+ ++|.|+..++...+...-.. ....+.+-+..+|.+.+|.|+|++++....... ...
T Consensus 76 ~~rl~~l~~~iD~~--~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 76 QERLGKLVPKIDSD--SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred HHHHHHHHhhhcCC--CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 45567778888888 99999999999887443211 334456778899999999999999999876431 011
Q ss_pred ------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCcc
Q 041619 101 ------PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKI 174 (222)
Q Consensus 101 ------~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~I 174 (222)
....+-+.-|+.-|.|++|.++.+|| ..++ ++.-.+....-+++..+...|.|+||.|
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF---------~aFL-------HPEe~p~M~~iVi~Etl~d~Dkn~DG~I 217 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEF---------TAFL-------HPEEHPHMKDIVIAETLEDIDKNGDGKI 217 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHH---------Hhcc-------ChhhcchHHHHHHHHHHhhcccCCCCce
Confidence 11233456799999999999999999 6654 4443444555566666789999999999
Q ss_pred CHHHHHHHHhhChh
Q 041619 175 DPEEWKEFVARNPS 188 (222)
Q Consensus 175 s~eeF~~~~~~~~~ 188 (222)
+++||+.-+...+.
T Consensus 218 ~~eEfigd~~~~~~ 231 (325)
T KOG4223|consen 218 SLEEFIGDLYSHEG 231 (325)
T ss_pred eHHHHHhHHhhccC
Confidence 99999988876654
No 23
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.02 E-value=1.9e-09 Score=74.27 Aligned_cols=69 Identities=25% Similarity=0.379 Sum_probs=55.6
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHH
Q 041619 104 EKVSFAFQLFD-VSQTG-FIEREEVKGVILTLLVKEMILALLK-ESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWK 180 (222)
Q Consensus 104 ~~~~~~F~~~D-~d~~G-~I~~~el~~~~~~~~~~~~l~~~~~-~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~ 180 (222)
..++.+|+.|| .+++| .|+.+|| +.+|..-+. ..|...++++++.++ +..|.|++|.|+|++|+
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL---------~~ll~~~~~~~lg~~~~~~~v~~~i----~~~D~n~dG~v~f~eF~ 74 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSEL---------KELINNELSHFLEEIKEQEVVDKVM----ETLDSDGDGECDFQEFM 74 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHH---------HHHHHHHhHHHhcCCCCHHHHHHHH----HHhCCCCCCcCcHHHHH
Confidence 46889999998 79999 5999999 666554111 127778888897777 89999999999999999
Q ss_pred HHHhh
Q 041619 181 EFVAR 185 (222)
Q Consensus 181 ~~~~~ 185 (222)
.++..
T Consensus 75 ~li~~ 79 (88)
T cd05027 75 AFVAM 79 (88)
T ss_pred HHHHH
Confidence 88754
No 24
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=99.01 E-value=6.7e-09 Score=89.34 Aligned_cols=152 Identities=18% Similarity=0.300 Sum_probs=116.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHH----HhcCCCCcccHHHHHHHHHhhCC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQL----FDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~----~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
-|+-+....++..|-.+|++ ++|.|+.+++..+-... .....++++|.. .-...+|+++|++|+-++-...
T Consensus 271 ~FS~e~f~viy~kFweLD~D--hd~lidk~~L~ry~d~t--lt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e- 345 (493)
T KOG2562|consen 271 YFSYEHFYVIYCKFWELDTD--HDGLIDKEDLKRYGDHT--LTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE- 345 (493)
T ss_pred heeHHHHHHHHHHHhhhccc--cccccCHHHHHHHhccc--hhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc-
Confidence 37888888899999999999 99999999998654322 346778999993 3334689999999999988777
Q ss_pred CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCHHHHHHHHHHHHHHhCCCCCCccCHH
Q 041619 99 EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLI-LSDDIIEAIINKAFEDADFKGDGKIDPE 177 (222)
Q Consensus 99 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~-~~~~~i~~~~~~~f~~~d~~~dg~Is~e 177 (222)
.......++..|+.+|.+++|.|+..|++.+.-.|. .. +...|.. ++ ++.++.++++...+...+.||..
T Consensus 346 ~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~-----~r-m~~~~~e~l~---fed~l~qi~DMvkP~~~~kItLq 416 (493)
T KOG2562|consen 346 DKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQL-----QR-MECMGQEALP---FEDALCQIRDMVKPEDENKITLQ 416 (493)
T ss_pred cCCCccchhhheeeeeccCCCcccHHHHHHHHHHHH-----HH-HHhcCCCccc---HHHHHHHHHHHhCccCCCceeHH
Confidence 667778899999999999999999999977774442 21 1222433 33 35567888899998999999999
Q ss_pred HHHHHHhhChhh
Q 041619 178 EWKEFVARNPSL 189 (222)
Q Consensus 178 eF~~~~~~~~~~ 189 (222)
+|.. ....-.+
T Consensus 417 Dlk~-skl~~~v 427 (493)
T KOG2562|consen 417 DLKG-SKLAGTV 427 (493)
T ss_pred HHhh-ccccchh
Confidence 9988 4443333
No 25
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.99 E-value=1e-08 Score=80.23 Aligned_cols=111 Identities=22% Similarity=0.288 Sum_probs=88.2
Q ss_pred cchHHHHHHHHHHhcCC-CCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 041619 64 KQSLIADRVFQLFDLKR-DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILAL 142 (222)
Q Consensus 64 ~~~~~~~~lf~~~d~~~-~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~ 142 (222)
-+..+++..++-+-... +|.++-++|..+++.+.+.+....-...+|+.||+|++|.|+..|| ...+...
T Consensus 23 f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Ef---------i~als~~ 93 (193)
T KOG0044|consen 23 FSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEF---------ICALSLT 93 (193)
T ss_pred CCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHH---------HHHHHHH
Confidence 45666777787776664 8999999999999999988888999999999999999999999998 4433332
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 143 LKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 143 ~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
.+ .-+++.++++|...|.|++|.||++|+..++...-.+..
T Consensus 94 ~r--------Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~ 134 (193)
T KOG0044|consen 94 SR--------GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTG 134 (193)
T ss_pred cC--------CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcc
Confidence 21 114444578899999999999999999998865444433
No 26
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.96 E-value=5e-09 Score=73.02 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=53.8
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHH
Q 041619 104 EKVSFAFQLFD-VSQTG-FIEREEVKGVILTLLVKEMILALL-KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWK 180 (222)
Q Consensus 104 ~~~~~~F~~~D-~d~~G-~I~~~el~~~~~~~~~~~~l~~~~-~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~ 180 (222)
..+..+|+.|| +|++| +|+.+|| +.++...+ ...+...++.+++.++ ..+|.|++|.|+|+||+
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL---------~~ll~~~~~~~~~~~~~~~~v~~i~----~elD~n~dG~Idf~EF~ 76 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGEL---------KELLQRELTDFLSSQKDPMLVDKIM----NDLDSNKDNEVDFNEFV 76 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHH---------HHHHHHHhHHhcccccCHHHHHHHH----HHhCCCCCCCCCHHHHH
Confidence 45677899999 78998 5999999 66554422 1123344677786666 89999999999999999
Q ss_pred HHHhhCh
Q 041619 181 EFVARNP 187 (222)
Q Consensus 181 ~~~~~~~ 187 (222)
.++....
T Consensus 77 ~l~~~l~ 83 (93)
T cd05026 77 VLVAALT 83 (93)
T ss_pred HHHHHHH
Confidence 9886653
No 27
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.89 E-value=1.1e-08 Score=71.45 Aligned_cols=75 Identities=21% Similarity=0.273 Sum_probs=58.1
Q ss_pred HHHHHHHhhhhcC-CC-CCcccHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 103 AEKVSFAFQLFDV-SQ-TGFIEREEVKGVILTLLVKEMILALL-KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 103 ~~~~~~~F~~~D~-d~-~G~I~~~el~~~~~~~~~~~~l~~~~-~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
...+..+|..||. ++ +|.|+.+|| +.++.... ...|..+++++++.++ ..+|.+++|.|+|++|
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El---------~~~l~~~~g~~lg~~~s~~ei~~~~----~~~D~~~dg~I~f~eF 73 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKEL---------KKLMEKELSEFLKNQKDPMAVDKIM----KDLDQNRDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHH---------HHHHHHHhHHHhhccccHHHHHHHH----HHhCCCCCCcCcHHHH
Confidence 3568899999997 97 699999999 66554321 1136677888886666 8999999999999999
Q ss_pred HHHHhhChhhh
Q 041619 180 KEFVARNPSLL 190 (222)
Q Consensus 180 ~~~~~~~~~~~ 190 (222)
+.++....-+.
T Consensus 74 ~~l~~~~~~~~ 84 (94)
T cd05031 74 VSLVAGLSIAC 84 (94)
T ss_pred HHHHHHHHHHH
Confidence 99887655443
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.89 E-value=7e-09 Score=67.33 Aligned_cols=61 Identities=36% Similarity=0.561 Sum_probs=49.4
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-----chHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 041619 31 ILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-----QSLIADRVFQLFDLKRDGGIEFEEFVRSL 93 (222)
Q Consensus 31 ~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-----~~~~~~~lf~~~d~~~~g~i~f~eF~~~~ 93 (222)
++..+|+.+|.+ ++|+|+.++|..++...+.. ....++.+|+.+|.+++|.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d--~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKD--GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTT--SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCC--ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 367888999998 99999999999988776532 23456777999999999999999998764
No 29
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.88 E-value=1.4e-08 Score=70.53 Aligned_cols=74 Identities=22% Similarity=0.314 Sum_probs=56.8
Q ss_pred HHHHHHHhhhhc-CCCCC-cccHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 103 AEKVSFAFQLFD-VSQTG-FIEREEVKGVILTLLVKEMILALL-KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 103 ~~~~~~~F~~~D-~d~~G-~I~~~el~~~~~~~~~~~~l~~~~-~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
.+.++.+|+.|| .+++| .|+.+|| +.++...+ ...+...++++++.++ ..+|.+++|.|+|++|
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El---------~~~l~~~lg~~~~~~~s~~~v~~i~----~~~D~d~~G~I~f~eF 74 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKEL---------KDLLQTELSDFLDAQKDADAVDKIM----KELDENGDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHH---------HHHHHHHHHHHccCCCCHHHHHHHH----HHHCCCCCCcCcHHHH
Confidence 457899999997 99999 5999999 66654322 1124456777886666 8999999999999999
Q ss_pred HHHHhhChhh
Q 041619 180 KEFVARNPSL 189 (222)
Q Consensus 180 ~~~~~~~~~~ 189 (222)
+.++......
T Consensus 75 ~~l~~~~~~~ 84 (92)
T cd05025 75 VVLVAALTVA 84 (92)
T ss_pred HHHHHHHHHH
Confidence 9988765443
No 30
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-08 Score=78.68 Aligned_cols=89 Identities=19% Similarity=0.364 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHH
Q 041619 29 IEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVS 107 (222)
Q Consensus 29 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~ 107 (222)
|+.++..|..+|.+ ++|.|+..||+.+|..+|-. +....+.|++.+|...+|.|.|++|+.++..+. ++.
T Consensus 123 i~~Wr~vF~~~D~D--~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~-------~lt 193 (221)
T KOG0037|consen 123 INQWRNVFRTYDRD--RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ-------RLT 193 (221)
T ss_pred HHHHHHHHHhcccC--CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH-------HHH
Confidence 66666666667776 77777777777777666654 445556666677666566677777776665443 566
Q ss_pred HHhhhhcCCCCCcc--cHHHH
Q 041619 108 FAFQLFDVSQTGFI--EREEV 126 (222)
Q Consensus 108 ~~F~~~D~d~~G~I--~~~el 126 (222)
.+|+.+|++..|.| +.++|
T Consensus 194 ~~Fr~~D~~q~G~i~~~y~df 214 (221)
T KOG0037|consen 194 EAFRRRDTAQQGSITISYDDF 214 (221)
T ss_pred HHHHHhccccceeEEEeHHHH
Confidence 66777777666643 34444
No 31
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.84 E-value=2.4e-08 Score=68.77 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=56.1
Q ss_pred HHHHHHhhhhcC-CC-CCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 104 EKVSFAFQLFDV-SQ-TGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 104 ~~~~~~F~~~D~-d~-~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
..+..+|..||. ++ +|+|+.+|| +.++... ...|..++++++++++ +..|.|++|+|+|+||+.
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL---------~~~l~~~-~~lg~k~t~~ev~~m~----~~~D~d~dG~Idf~EFv~ 75 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKEL---------KELIQKE-LTIGSKLQDAEIAKLM----EDLDRNKDQEVNFQEYVT 75 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHH---------HHHHHHH-HhcCCCCCHHHHHHHH----HHhcCCCCCCCcHHHHHH
Confidence 356789999998 67 899999999 7766431 1238889999997777 899999999999999998
Q ss_pred HHhhC
Q 041619 182 FVARN 186 (222)
Q Consensus 182 ~~~~~ 186 (222)
++...
T Consensus 76 lm~~l 80 (88)
T cd05029 76 FLGAL 80 (88)
T ss_pred HHHHH
Confidence 88654
No 32
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.84 E-value=2e-08 Score=69.16 Aligned_cols=69 Identities=23% Similarity=0.260 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhcC-CCCCCCcccHHHHHHHHhh-ccCc-ch-HHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKKLSS-SLVDDGIISKEEFQLGLFK-NHKK-QS-LIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~-~~~~~G~i~~~ef~~~l~~-~~~~-~~-~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
.-+..+..+|+.+|+ + ++|+|+..+|+..+.. ++.. .. ..++.+++.+|.|++|.|+|+||+.++..+.
T Consensus 5 ~ai~~l~~~F~~fd~~~--~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKG--GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCC--CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 447788899999998 8 9999999999999977 6533 33 7889999999999999999999999887654
No 33
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.82 E-value=8.3e-08 Score=71.76 Aligned_cols=104 Identities=23% Similarity=0.261 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhc
Q 041619 67 LIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKES 146 (222)
Q Consensus 67 ~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~ 146 (222)
..++..|..++.+++|.|++.|+..++.+.- -....+.+..+..-+|+++.|.|+.++| +.++...+
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralG-FE~~k~ei~kll~d~dk~~~g~i~fe~f---------~~~mt~k~--- 99 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALG-FEPKKEEILKLLADVDKEGSGKITFEDF---------RRVMTVKL--- 99 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcC-CCcchHHHHHHHHhhhhccCceechHHH---------HHHHHHHH---
Confidence 4567889999999999999999977776654 4466788899999999999999999999 66554443
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhCh
Q 041619 147 DLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNP 187 (222)
Q Consensus 147 g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~ 187 (222)
+..-+.+++ ..+|+.+|.|++|.|++.+|..++...-
T Consensus 100 ~e~dt~eEi----~~afrl~D~D~~Gkis~~~lkrvakeLg 136 (172)
T KOG0028|consen 100 GERDTKEEI----KKAFRLFDDDKTGKISQRNLKRVAKELG 136 (172)
T ss_pred hccCcHHHH----HHHHHcccccCCCCcCHHHHHHHHHHhC
Confidence 555577777 5555999999999999999999886643
No 34
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.82 E-value=3.6e-08 Score=69.05 Aligned_cols=72 Identities=17% Similarity=0.358 Sum_probs=62.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
.+|.+++..+...|..+|.+ ++|.|+.+++..++...+ .+...++.++..+|.+++|.|+|++|+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d--~~G~Is~~el~~~l~~~~-~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKN--QDGTVTGAQAKPILLKSG-LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 36888999999999999998 999999999999997765 3556788999999999999999999999876543
No 35
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.75 E-value=6.9e-08 Score=66.40 Aligned_cols=71 Identities=20% Similarity=0.328 Sum_probs=54.0
Q ss_pred HHHHHHHhhhhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 103 AEKVSFAFQLFDV--SQTGFIEREEVKGVILTLLVKEMILALLK-ESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 103 ~~~~~~~F~~~D~--d~~G~I~~~el~~~~~~~~~~~~l~~~~~-~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
...++.+|..||+ +++|.|+.+|| ..++...+. ..+...++.+++.++ ..+|.+++|.|+|++|
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el---------~~~l~~~~g~~~~~~~~~~ei~~i~----~~~d~~~~g~I~f~eF 73 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKEL---------KELLETELPNFLKNQKDPEAVDKIM----KDLDVNKDGKVDFQEF 73 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHH---------HHHHHHHhhhhccCCCCHHHHHHHH----HHhccCCCCcCcHHHH
Confidence 4568889999999 89999999999 665543211 112234577776665 8999999999999999
Q ss_pred HHHHhhC
Q 041619 180 KEFVARN 186 (222)
Q Consensus 180 ~~~~~~~ 186 (222)
+.++...
T Consensus 74 ~~~~~~~ 80 (88)
T cd00213 74 LVLIGKL 80 (88)
T ss_pred HHHHHHH
Confidence 9988754
No 36
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.75 E-value=4.7e-08 Score=63.32 Aligned_cols=63 Identities=24% Similarity=0.331 Sum_probs=50.8
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhC
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~ 186 (222)
+.+|..+|.+++|.|+.+|+ ..++... | .++++++.++ ..+|.+++|.|++++|+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el---------~~~l~~~----g--~~~~~~~~i~----~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEA---------RPFLGKS----G--LPRSVLAQIW----DLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHH---------HHHHHHc----C--CCHHHHHHHH----HHhcCCCCCcCCHHHHHHHHHHH
Confidence 56899999999999999999 6665442 4 3666775555 89999999999999999988655
Q ss_pred hh
Q 041619 187 PS 188 (222)
Q Consensus 187 ~~ 188 (222)
+.
T Consensus 63 ~~ 64 (67)
T cd00052 63 AL 64 (67)
T ss_pred HH
Confidence 43
No 37
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.75 E-value=8.1e-08 Score=66.26 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=52.4
Q ss_pred HHHHHHHhhh-hcCCCCC-cccHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 103 AEKVSFAFQL-FDVSQTG-FIEREEVKGVILTLLVKEMILALLKE-SDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 103 ~~~~~~~F~~-~D~d~~G-~I~~~el~~~~~~~~~~~~l~~~~~~-~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
...+..+|+. +|++|+| +|+.+||+.++ ...+.. .+...++.+++.++ ..+|.|+||.|+|+||
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll---------~~e~~~~~~~~~~~~~~~~ll----~~~D~d~DG~I~f~EF 74 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFM---------NTELASFTKNQKDPGVLDRMM----KKLDLNSDGQLDFQEF 74 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHH---------HHhhhHhhcCCCCHHHHHHHH----HHcCCCCCCcCcHHHH
Confidence 3567889999 6788876 99999994444 332111 13345677786666 8999999999999999
Q ss_pred HHHHhhC
Q 041619 180 KEFVARN 186 (222)
Q Consensus 180 ~~~~~~~ 186 (222)
+.++...
T Consensus 75 ~~l~~~l 81 (89)
T cd05023 75 LNLIGGL 81 (89)
T ss_pred HHHHHHH
Confidence 9988654
No 38
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.72 E-value=9.9e-08 Score=66.80 Aligned_cols=71 Identities=23% Similarity=0.327 Sum_probs=57.3
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 102 HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 102 ~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
....+..+|..+|.+++|.|+.+|+ +.++... | +++++++.++ ..+|.+++|.|++++|+.
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el---------~~~l~~~----~--~~~~ev~~i~----~~~d~~~~g~I~~~eF~~ 68 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQA---------KPILLKS----G--LPQTLLAKIW----NLADIDNDGELDKDEFAL 68 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHH---------HHHHHHc----C--CCHHHHHHHH----HHhcCCCCCCcCHHHHHH
Confidence 4567899999999999999999999 7665442 3 6777776555 899999999999999999
Q ss_pred HHhhChhhhh
Q 041619 182 FVARNPSLLK 191 (222)
Q Consensus 182 ~~~~~~~~~~ 191 (222)
++........
T Consensus 69 ~~~~~~~~~~ 78 (96)
T smart00027 69 AMHLIYRKLN 78 (96)
T ss_pred HHHHHHHHHc
Confidence 8866555543
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=98.72 E-value=1.2e-07 Score=86.59 Aligned_cols=99 Identities=19% Similarity=0.299 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHH---HHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 041619 67 LIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEK---VSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALL 143 (222)
Q Consensus 67 ~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~ 143 (222)
..+.+.|..+|.+++|.+ ... ++..+......+.+ ++.+|..+|.|++|.|+.+|| ..++..+
T Consensus 143 ~elkeaF~lfD~dgdG~i-Lg~---ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEF---------l~lL~~l- 208 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV-VGS---IFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEF---------SDLIKAF- 208 (644)
T ss_pred HHHHHHHHHHCCCCCCcC-HHH---HHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHH---------HHHHHHh-
Confidence 456788999999999987 333 33332211223333 899999999999999999999 7766543
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhC
Q 041619 144 KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 144 ~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~ 186 (222)
+...+++++ ..+|+.+|.|++|.|+++||..++...
T Consensus 209 ---g~~~seEEL----~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 209 ---GNLVAANKK----EELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred ---ccCCCHHHH----HHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 555677776 555599999999999999999998774
No 40
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.70 E-value=8.5e-08 Score=69.32 Aligned_cols=62 Identities=24% Similarity=0.405 Sum_probs=49.5
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 102 HAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 102 ~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
....+..+|..+|.|++|.|+.+|| ..+. + ...+.. +..+|..+|.|+||.||++||..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL---------~~~~--l------~~~e~~----~~~f~~~~D~n~Dg~IS~~Ef~~ 104 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHEL---------APIR--L------DPNEHC----IKPFFESCDLDKDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHH---------HHHH--c------cchHHH----HHHHHHHHCCCCCCCCCHHHHHH
Confidence 3467899999999999999999999 6543 1 122333 35566999999999999999999
Q ss_pred HHh
Q 041619 182 FVA 184 (222)
Q Consensus 182 ~~~ 184 (222)
++.
T Consensus 105 cl~ 107 (116)
T cd00252 105 CFI 107 (116)
T ss_pred HHh
Confidence 993
No 41
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.68 E-value=1.4e-07 Score=64.99 Aligned_cols=69 Identities=20% Similarity=0.345 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhc-CCCCCCC-cccHHHHHHHHhh-----ccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKKLS-SSLVDDG-IISKEEFQLGLFK-----NHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~~d-~~~~~~G-~i~~~ef~~~l~~-----~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+-+..+..+|+.+| .+ ++| .|+..+|+.++.. .+.. .+..++.+++.+|.+++|.|+|++|+.++....
T Consensus 5 ~~~~~l~~aF~~fD~~d--gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 5 KAMVALIDVFHQYSGRE--GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHHHHhcccC--CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 44788899999997 67 899 5999999999987 5544 456699999999999999999999999876543
No 42
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.68 E-value=1.6e-07 Score=65.44 Aligned_cols=68 Identities=24% Similarity=0.459 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhhc-CCCCCCC-cccHHHHHHHHhhc------cCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 28 EIEILYLLFKKLS-SSLVDDG-IISKEEFQLGLFKN------HKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 28 ei~~l~~~F~~~d-~~~~~~G-~i~~~ef~~~l~~~------~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
-+..+..+|+.+| .+ ++| .|+..||+.++... .......++.++..+|.+++|.|+|+||+.++..++
T Consensus 8 a~~~~~~~F~~~dd~d--gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 8 AMDTLIRIFHNYSGKE--GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 3677778888887 56 787 59999999988552 122456789999999999999999999999887554
No 43
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.67 E-value=6.8e-08 Score=60.12 Aligned_cols=52 Identities=29% Similarity=0.527 Sum_probs=43.6
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 117 QTGFIEREEVKGVILTLLVKEMILALLKESDLI-LSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 117 ~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~-~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
++|.|+.++| +.++..+ |.. ++++++..++ ..+|.+++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~---------~~~l~~~----g~~~~s~~e~~~l~----~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEF---------RRALSKL----GIKDLSEEEVDRLF----REFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHH---------HHHHHHT----TSSSSCHHHHHHHH----HHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHH---------HHHHHHh----CCCCCCHHHHHHHH----HhcccCCCCCCCHHHHHHHHHh
Confidence 4799999999 7766333 878 9999985555 9999999999999999998853
No 44
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.65 E-value=7.2e-07 Score=85.79 Aligned_cols=141 Identities=16% Similarity=0.279 Sum_probs=115.6
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccC--------cchHHHHHHHHHHhcCCCCcccHHHHHH
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHK--------KQSLIADRVFQLFDLKRDGGIEFEEFVR 91 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~--------~~~~~~~~lf~~~d~~~~g~i~f~eF~~ 91 (222)
...+.|++.+.++.-+|+.+|.+ .+|.+++.+|..+|...|. .|++..+.++..+|++.+|.|+..+|+.
T Consensus 2243 n~~GVtEe~L~EFs~~fkhFDke--k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKE--KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMA 2320 (2399)
T ss_pred ccCCCCHHHHHHHHHHHHHhchh--hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHH
Confidence 46689999999999999999999 9999999999999977653 2566889999999999999999999999
Q ss_pred HHHhhCC-CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCC-
Q 041619 92 SLSIFHP-EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFK- 169 (222)
Q Consensus 92 ~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~- 169 (222)
++....+ .....+.++.+|+.+|. +..+|+.+++ .. .+++++.+-++..+=...++.
T Consensus 2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~---------~~-----------~ltreqaefc~s~m~~~~e~~~ 2379 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEEL---------YQ-----------NLTREQAEFCMSKMKPYAETSS 2379 (2399)
T ss_pred HHHhcccccccchHHHHHHHHHhhc-CCccccHHHH---------Hh-----------cCCHHHHHHHHHHhhhhccccc
Confidence 8765432 23455699999999999 8899999999 32 578888887776665666664
Q ss_pred ---CCCccCHHHHHHHH
Q 041619 170 ---GDGKIDPEEWKEFV 183 (222)
Q Consensus 170 ---~dg~Is~eeF~~~~ 183 (222)
-.+.+.|.+|.+-+
T Consensus 2380 ~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2380 GRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred CCCccccccHHHHHHHH
Confidence 23468999998765
No 45
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.64 E-value=8.1e-08 Score=79.40 Aligned_cols=126 Identities=22% Similarity=0.315 Sum_probs=98.8
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHH
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIERE 124 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~ 124 (222)
+.+.|--.+|...+ ..........+|..+|.+.+|.++|.+.+..++.+|......+.++.+|+.|+.+.||.+...
T Consensus 240 kg~~igi~efa~~l---~vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~ 316 (412)
T KOG4666|consen 240 KGPDIGIVEFAVNL---RVPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEH 316 (412)
T ss_pred cCCCcceeEeeeee---ecchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchH
Confidence 44556555555433 233344568899999999999999999999999999888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 125 EVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 125 el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
+| .-+++..+ |.. .-.+ -.+|...+...+|+|++++|.+++...|++..
T Consensus 317 ~l---------s~ilq~~l---gv~--~l~v----~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a~ 365 (412)
T KOG4666|consen 317 IL---------SLILQVVL---GVE--VLRV----PVLFPSIEQKDDPKIYASNFRKFAATEPNLAL 365 (412)
T ss_pred HH---------HHHHHHhc---Ccc--eeec----cccchhhhcccCcceeHHHHHHHHHhCchhhh
Confidence 99 55555443 321 1122 23458889899999999999999999999875
No 46
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.62 E-value=2.2e-07 Score=58.28 Aligned_cols=61 Identities=38% Similarity=0.559 Sum_probs=50.5
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 106 VSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 106 ~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
+..+|..+|.+++|.|+.+|+ ..++... +...+.+.+.. +|..+|.+++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~---------~~~l~~~----~~~~~~~~~~~----~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADEL---------KAALKSL----GEGLSEEEIDE----MIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHH---------HHHHHHh----CCCCCHHHHHH----HHHHhCCCCCCeEeHHHHHHHh
Confidence 577899999999999999999 6665543 66777777654 4589999999999999998865
No 47
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.61 E-value=5.4e-07 Score=70.46 Aligned_cols=89 Identities=26% Similarity=0.291 Sum_probs=70.1
Q ss_pred HHhhcCCCCCCCc-ccHHHHHHHHhhccCc--chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCc------HHHH
Q 041619 36 FKKLSSSLVDDGI-ISKEEFQLGLFKNHKK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPH------AEKV 106 (222)
Q Consensus 36 F~~~d~~~~~~G~-i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~------~~~~ 106 (222)
++.++.+ ++|. |+.++|...+.-.... ....++-.|+.||.+++|.|+.+|+..++..+...... ...+
T Consensus 72 ~~~f~~~--~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~ 149 (187)
T KOG0034|consen 72 IDRFDTD--GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIV 149 (187)
T ss_pred HHHHhcc--CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHH
Confidence 4445555 6777 9999999888554333 33356789999999999999999999999988754433 2346
Q ss_pred HHHhhhhcCCCCCcccHHHH
Q 041619 107 SFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el 126 (222)
...|..+|.|++|.|+.+|+
T Consensus 150 d~t~~e~D~d~DG~IsfeEf 169 (187)
T KOG0034|consen 150 DKTFEEADTDGDGKISFEEF 169 (187)
T ss_pred HHHHHHhCCCCCCcCcHHHH
Confidence 77899999999999999999
No 48
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.59 E-value=3.4e-07 Score=62.95 Aligned_cols=69 Identities=26% Similarity=0.424 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhcC--CCCCCCcccHHHHHHHHhh-ccCc-----chHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 041619 26 ETEIEILYLLFKKLSS--SLVDDGIISKEEFQLGLFK-NHKK-----QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIF 96 (222)
Q Consensus 26 ~~ei~~l~~~F~~~d~--~~~~~G~i~~~ef~~~l~~-~~~~-----~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~ 96 (222)
++++..+..+|..+|. + ++|.|+..++..++.. .+.. ....++.++..+|.+++|.|+|++|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~--~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG--DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccC--CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4568888889999998 8 9999999999988864 3321 35678999999999999999999999987754
No 49
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.59 E-value=3e-07 Score=59.48 Aligned_cols=61 Identities=26% Similarity=0.431 Sum_probs=51.8
Q ss_pred HHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 041619 33 YLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIF 96 (222)
Q Consensus 33 ~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~ 96 (222)
...|..+|.+ ++|.|+.+++..++...+. +...++.++..+|.+++|.|+|.+|+.++...
T Consensus 2 ~~~F~~~D~~--~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPD--GDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCC--CCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3568888888 9999999999999877764 66678999999999999999999999987654
No 50
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.56 E-value=6.4e-07 Score=61.67 Aligned_cols=69 Identities=25% Similarity=0.367 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhhcC-CCCC-CCcccHHHHHHHHhh---ccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKKLSS-SLVD-DGIISKEEFQLGLFK---NHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~-~~~~-~G~i~~~ef~~~l~~---~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+.+..+-..|++++. + + +|+|+.++|+..+.. .+.. ....++.+++.+|.+++|.|+|+||+.++..+.
T Consensus 7 ~~~~~~i~~F~~y~~~~--~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 7 QAIGLLVAIFHKYSGRE--GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 346677778888876 3 4 789999999999953 3433 667889999999999999999999999887543
No 51
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.55 E-value=3.1e-07 Score=73.33 Aligned_cols=148 Identities=16% Similarity=0.181 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccC----cchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC--
Q 041619 27 TEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHK----KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA-- 100 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~----~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~-- 100 (222)
+-.+.+..+|++.|-+ .+|+|+..++++.+..... .....-+..|+..|++++|.|+|+||...+.......
T Consensus 98 rsrrklmviFsKvDVN--tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsek 175 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVN--TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEK 175 (362)
T ss_pred HHHHHHHHHHhhcccC--ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchH
Confidence 3466788899999988 9999999999988744211 1223346788999999999999999987665322110
Q ss_pred ---------------------------------C------------------------cHHHHHHHhhhhcCCCCCcccH
Q 041619 101 ---------------------------------P------------------------HAEKVSFAFQLFDVSQTGFIER 123 (222)
Q Consensus 101 ---------------------------------~------------------------~~~~~~~~F~~~D~d~~G~I~~ 123 (222)
. -...++.+.+.+|+|++..++.
T Consensus 176 evadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSv 255 (362)
T KOG4251|consen 176 EVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSV 255 (362)
T ss_pred HHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecc
Confidence 0 0112345678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Q 041619 124 EEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184 (222)
Q Consensus 124 ~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~ 184 (222)
.||...+.+. +-...|..+.+.+++.-.+.+-..+|.|.||.+|++|...++-
T Consensus 256 peFislpvGT--------VenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~d 308 (362)
T KOG4251|consen 256 PEFISLPVGT--------VENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVD 308 (362)
T ss_pred hhhhcCCCcc--------hhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcC
Confidence 9994443322 1122366777777777666666788999999999999988853
No 52
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.53 E-value=4.7e-07 Score=62.85 Aligned_cols=67 Identities=27% Similarity=0.394 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhc-CCCCCCCc-ccHHHHHHHHhh-ccC-----cchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 29 IEILYLLFKKLS-SSLVDDGI-ISKEEFQLGLFK-NHK-----KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 29 i~~l~~~F~~~d-~~~~~~G~-i~~~ef~~~l~~-~~~-----~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+..+..+|+.+| .+ ++|+ |+..+++.+|.. .+. .++..++.++..+|.+++|.|+|++|+.++..++
T Consensus 8 ~~~l~~~F~~fDd~d--g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 8 METLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHhccc--CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 566778888886 77 8994 999999998864 321 2566789999999999999999999998877554
No 53
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.52 E-value=8.2e-07 Score=61.25 Aligned_cols=69 Identities=29% Similarity=0.444 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHh-hcCCCCCCC-cccHHHHHHHHhhcc------CcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKK-LSSSLVDDG-IISKEEFQLGLFKNH------KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~-~d~~~~~~G-~i~~~ef~~~l~~~~------~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+.+..+...|+. .+.+ ++| .|+.+||..++.... ...+..++.++..+|.+++|.|+|+||+..+..+.
T Consensus 6 ~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 6 RCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 457888999999 5565 655 999999999986642 22456789999999999999999999999877553
No 54
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.50 E-value=9.2e-07 Score=61.63 Aligned_cols=66 Identities=26% Similarity=0.481 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhcC-CCCC-CCcccHHHHHHHHhh-----ccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 041619 29 IEILYLLFKKLSS-SLVD-DGIISKEEFQLGLFK-----NHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIF 96 (222)
Q Consensus 29 i~~l~~~F~~~d~-~~~~-~G~i~~~ef~~~l~~-----~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~ 96 (222)
+..++.+|..+|. + + +|.|+..++..++.. .+.. ....++.++..+|.+++|.|+|++|+.++...
T Consensus 7 ~~~l~~~F~~~D~~d--g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKD--GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccC--CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5667888888876 6 7 599999999988864 2222 56678899999999999999999999887643
No 55
>PF14658 EF-hand_9: EF-hand domain
Probab=98.49 E-value=6.8e-07 Score=57.42 Aligned_cols=61 Identities=18% Similarity=0.340 Sum_probs=53.6
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCCCCC-CccCHHHHHHHHhh
Q 041619 108 FAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDL-ILSDDIIEAIINKAFEDADFKGD-GKIDPEEWKEFVAR 185 (222)
Q Consensus 108 ~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~-~~~~~~i~~~~~~~f~~~d~~~d-g~Is~eeF~~~~~~ 185 (222)
.+|.+||.++.|.|...++ ..+|.++ +. ..++.+++.+. .++|+++. |.|+++.|+..|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l---------~~~Lra~----~~~~p~e~~Lq~l~----~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDL---------ITYLRAV----TGRSPEESELQDLI----NELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHH---------HHHHHHH----cCCCCcHHHHHHHH----HHhCCCCCCceEeHHHHHHHHHH
Confidence 3799999999999999999 7777766 55 78888998888 89999999 99999999998864
No 56
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.45 E-value=9.5e-07 Score=60.81 Aligned_cols=67 Identities=25% Similarity=0.399 Sum_probs=50.7
Q ss_pred HHHHHHhhhhcCC--CCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----HHHHHHHHHHHHHHhCCCCCCccCHH
Q 041619 104 EKVSFAFQLFDVS--QTGFIEREEVKGVILTLLVKEMILALLKESDLILS----DDIIEAIINKAFEDADFKGDGKIDPE 177 (222)
Q Consensus 104 ~~~~~~F~~~D~d--~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~----~~~i~~~~~~~f~~~d~~~dg~Is~e 177 (222)
..+...|+.|+.. ++|.|+.+|| +.++...+ |..++ +++++.++ ..+|.+++|.|+|+
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El---------~~ll~~~~---g~~~t~~~~~~~v~~i~----~~~D~d~dG~I~f~ 71 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEF---------KQLVEKEL---PNFLKKEKNQKAIDKIF----EDLDTNQDGQLSFE 71 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHH---------HHHHHHHh---hHhhccCCCHHHHHHHH----HHcCCCCCCcCcHH
Confidence 4567789999866 4799999999 66554222 33343 67775555 89999999999999
Q ss_pred HHHHHHhhC
Q 041619 178 EWKEFVARN 186 (222)
Q Consensus 178 eF~~~~~~~ 186 (222)
+|+.++...
T Consensus 72 eF~~~~~~~ 80 (88)
T cd05030 72 EFLVLVIKV 80 (88)
T ss_pred HHHHHHHHH
Confidence 999988754
No 57
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.44 E-value=3.2e-06 Score=77.04 Aligned_cols=168 Identities=17% Similarity=0.265 Sum_probs=131.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH--PEA 100 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~--~~~ 100 (222)
+.|.+|...-...|..+-. +.|+|+-.+-+.+|...++. ...+.+|+.+.|.|+||+++..||..++.... -.+
T Consensus 9 avT~~Er~K~~~qF~~Lkp---~~gfitg~qArnfflqS~LP-~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG 84 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKP---GQGFITGDQARNFFLQSGLP-TPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQG 84 (1118)
T ss_pred ccchHHHHHHHHHHhccCC---CCCccchHhhhhhHHhcCCC-hHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcC
Confidence 5788889999999999976 78999999999998777644 45568899999999999999999998875210 000
Q ss_pred --------------------------------------------------------------------------------
Q 041619 101 -------------------------------------------------------------------------------- 100 (222)
Q Consensus 101 -------------------------------------------------------------------------------- 100 (222)
T Consensus 85 ~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~sp 164 (1118)
T KOG1029|consen 85 IQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSP 164 (1118)
T ss_pred CcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCC
Confidence
Q ss_pred ---------------------------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH
Q 041619 101 ---------------------------PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDD 153 (222)
Q Consensus 101 ---------------------------~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~ 153 (222)
....+.+..|..+|+..+|+++-.+- +.+|.. ..++..
T Consensus 165 l~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qa---------R~aL~q------S~Lpq~ 229 (1118)
T KOG1029|consen 165 LPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQA---------RSALGQ------SGLPQN 229 (1118)
T ss_pred CCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHH---------HHHHHh------cCCchh
Confidence 12345678999999999999999999 776632 256666
Q ss_pred HHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhcCcccchhhhccCCCcccCCC
Q 041619 154 IIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKDITTAFPSFVLRPD 213 (222)
Q Consensus 154 ~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 213 (222)
.+..+. ...|+|+||+++-+||+-.+........-..++..-...+..|+|+-.+.
T Consensus 230 ~LA~IW----~LsDvd~DGkL~~dEfilam~liema~sGq~lP~tlP~E~Vpp~~r~~rs 285 (1118)
T KOG1029|consen 230 QLAHIW----TLSDVDGDGKLSADEFILAMHLIEMAKSGQPLPKTLPPELVPPSFRSSRS 285 (1118)
T ss_pred hHhhhe----eeeccCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCChhhcCcccccccC
Confidence 665554 78899999999999999888777777666666777777777888876654
No 58
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.44 E-value=3.7e-06 Score=71.86 Aligned_cols=134 Identities=24% Similarity=0.290 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHH
Q 041619 28 EIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVS 107 (222)
Q Consensus 28 ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~ 107 (222)
.-......|...|.+ .+|.+++++|.+.+ ...+..+-++|+.+|.+.||.|+.+|....+...- .....+++.
T Consensus 49 ~~~~~~~l~~~~d~~--~dg~vDy~eF~~Y~----~~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g-i~l~de~~~ 121 (463)
T KOG0036|consen 49 NYEAAKMLFSAMDAN--RDGRVDYSEFKRYL----DNKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG-IQLSDEKAA 121 (463)
T ss_pred chHHHHHHHHhcccC--cCCcccHHHHHHHH----HHhHHHHHHHHhhhccccCCccCHHHHHHHHHHhC-CccCHHHHH
Confidence 455667778888988 99999999999988 23455678999999999999999999999988776 557788899
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH--HHhCCCCCCccCHHHHHHHHhh
Q 041619 108 FAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF--EDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 108 ~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f--~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
.+|...|+++++.|+.+|+ ++.+. ..+.+++++++...- ..+|.+.+..|. ++|.....+
T Consensus 122 k~~e~~d~~g~~~I~~~e~---------rd~~l--------l~p~s~i~di~~~W~h~~~idigE~~~iP-dg~s~~e~~ 183 (463)
T KOG0036|consen 122 KFFEHMDKDGKATIDLEEW---------RDHLL--------LYPESDLEDIYDFWRHVLLIDIGEDAVLP-DGDSKLEND 183 (463)
T ss_pred HHHHHhccCCCeeeccHHH---------Hhhhh--------cCChhHHHHHHHhhhhheEEEccccccCC-cchHHHHhc
Confidence 9999999999999999999 87652 123556666653221 235788888887 888765544
Q ss_pred C
Q 041619 186 N 186 (222)
Q Consensus 186 ~ 186 (222)
.
T Consensus 184 ~ 184 (463)
T KOG0036|consen 184 S 184 (463)
T ss_pred c
Confidence 3
No 59
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.43 E-value=1.8e-06 Score=74.14 Aligned_cols=128 Identities=20% Similarity=0.332 Sum_probs=88.8
Q ss_pred HHHHhhcCCCCCCCcccHHHHHHHHhhccCc----chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHH
Q 041619 34 LLFKKLSSSLVDDGIISKEEFQLGLFKNHKK----QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFA 109 (222)
Q Consensus 34 ~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~ 109 (222)
--|..+++. .+|.|+..+|...+...... .....+++-+.++..+ ..|+++||.++..-.. +...+..|
T Consensus 322 lEF~~~~~~--~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~-~gISl~Ef~~Ff~Fl~----~l~dfd~A 394 (489)
T KOG2643|consen 322 LEFERFDKG--DSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDG-KGISLQEFKAFFRFLN----NLNDFDIA 394 (489)
T ss_pred HHHHHhCcc--cccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCC-CCcCHHHHHHHHHHHh----hhhHHHHH
Confidence 347788886 67999999999877443222 2334566666666653 3499999998876543 33444445
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 110 FQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 110 F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
...| ...++.|+..+| +.+...+. |..+++..+ +.+|..+|.|+||.++++||+.++++
T Consensus 395 l~fy-~~Ag~~i~~~~f---------~raa~~vt---GveLSdhVv----dvvF~IFD~N~Dg~LS~~EFl~Vmk~ 453 (489)
T KOG2643|consen 395 LRFY-HMAGASIDEKTF---------QRAAKVVT---GVELSDHVV----DVVFTIFDENNDGTLSHKEFLAVMKR 453 (489)
T ss_pred HHHH-HHcCCCCCHHHH---------HHHHHHhc---Cccccccee----eeEEEEEccCCCCcccHHHHHHHHHH
Confidence 5544 345679999999 44433332 888887655 55669999999999999999998865
No 60
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.42 E-value=1.2e-06 Score=54.48 Aligned_cols=50 Identities=40% Similarity=0.608 Sum_probs=41.3
Q ss_pred CCCcccHHHHHHHHhhccCc--chHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 041619 45 DDGIISKEEFQLGLFKNHKK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLS 94 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~ 94 (222)
++|.|+.++|+.++...+.. ++..+..+|..+|.+++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 36899999999998655533 556689999999999999999999998875
No 61
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.33 E-value=5.8e-06 Score=72.11 Aligned_cols=104 Identities=22% Similarity=0.329 Sum_probs=81.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHH-Hhhcc--CcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 041619 22 THFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLG-LFKNH--KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 22 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~-l~~~~--~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
.+-.+.|++.++-.|...+.+ +.-+++.++|... +...+ ...+..+..+-...|..+||.|+|+||..+-..+|
T Consensus 28 kra~~~eLr~if~~~as~e~~--ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC- 104 (694)
T KOG0751|consen 28 KRADPKELRSIFLKYASIEKN--GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLC- 104 (694)
T ss_pred ccCChHHHHHHHHHHhHHhhc--cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhcc-
Confidence 345677888888888888877 8889999999764 33322 22444455555566778899999999999988888
Q ss_pred CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 041619 99 EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVI 130 (222)
Q Consensus 99 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~ 130 (222)
.++...+.+|+.||..++|.++.++++.++
T Consensus 105 --~pDal~~~aFqlFDr~~~~~vs~~~~~~if 134 (694)
T KOG0751|consen 105 --APDALFEVAFQLFDRLGNGEVSFEDVADIF 134 (694)
T ss_pred --CchHHHHHHHHHhcccCCCceehHHHHHHH
Confidence 667888999999999999999999995544
No 62
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.32 E-value=3.8e-06 Score=60.71 Aligned_cols=64 Identities=20% Similarity=0.294 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 041619 25 KETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSL 93 (222)
Q Consensus 25 ~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~ 93 (222)
.......+...|..+|.+ ++|.|+.+|+..+. ....+..+..+|..+|.|++|.|+++||...+
T Consensus 43 ~~~~~~~l~w~F~~lD~d--~DG~Ls~~EL~~~~---l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGN--YDGKLSHHELAPIR---LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHH---ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 455666777778788777 78888888887554 12344556777777888888888888877776
No 63
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.31 E-value=4.3e-06 Score=52.25 Aligned_cols=56 Identities=29% Similarity=0.392 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 70 ~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
..+|..+|.+++|.|++.+|..++.... .......+..+|..+|.+++|.|+.+||
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ef 58 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKSLG-EGLSEEEIDEMIREVDKDGDGKIDFEEF 58 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCeEeHHHH
Confidence 3445555555555555555555555443 3344445555566666556666666555
No 64
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.29 E-value=1.5e-05 Score=68.70 Aligned_cols=131 Identities=21% Similarity=0.315 Sum_probs=89.7
Q ss_pred HHHHHHhhcCCCCCCCcccHHHHHHHHhh------ccC----------cc--hHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 041619 32 LYLLFKKLSSSLVDDGIISKEEFQLGLFK------NHK----------KQ--SLIADRVFQLFDLKRDGGIEFEEFVRSL 93 (222)
Q Consensus 32 l~~~F~~~d~~~~~~G~i~~~ef~~~l~~------~~~----------~~--~~~~~~lf~~~d~~~~g~i~f~eF~~~~ 93 (222)
+.-+|+.+|.+ +||.|+.+||...... .+. .- ...-..+-..+-.++++++++++|+.++
T Consensus 235 F~IAFKMFD~d--gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 235 FRIAFKMFDLD--GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ceeeeeeeecC--CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 44567788888 9999999999765411 111 10 1111124445778899999999999998
Q ss_pred HhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCc
Q 041619 94 SIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGK 173 (222)
Q Consensus 94 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~ 173 (222)
..+ .++-++.-|..+|+..+|.|+..+| ..++.... +.+ .+....+.+.+-+.++.++ ..
T Consensus 313 e~L-----q~Eil~lEF~~~~~~~~g~Ise~DF---------A~~lL~~a---~~n--~~~k~~~lkrvk~kf~~~~-~g 372 (489)
T KOG2643|consen 313 ENL-----QEEILELEFERFDKGDSGAISEVDF---------AELLLAYA---GVN--SKKKHKYLKRVKEKFKDDG-KG 372 (489)
T ss_pred HHH-----HHHHHHHHHHHhCcccccccCHHHH---------HHHHHHHc---ccc--hHhHHHHHHHHHHhccCCC-CC
Confidence 654 4677888999999999999999999 66654332 222 2233344555556776663 45
Q ss_pred cCHHHHHHHHh
Q 041619 174 IDPEEWKEFVA 184 (222)
Q Consensus 174 Is~eeF~~~~~ 184 (222)
||++||..+.+
T Consensus 373 ISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 373 ISLQEFKAFFR 383 (489)
T ss_pred cCHHHHHHHHH
Confidence 99988877664
No 65
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.27 E-value=5.3e-06 Score=57.09 Aligned_cols=71 Identities=24% Similarity=0.318 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-ccCc-c----hHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK-NHKK-Q----SLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~-~----~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+-+..+...|++++..-.++|.|+.++|+.++.. .+.. . +..++.++..+|.+++|.|+|++|+.++....
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 3477888889888763003689999999999863 3322 2 67789999999999999999999999887543
No 66
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.26 E-value=7.4e-06 Score=61.04 Aligned_cols=72 Identities=32% Similarity=0.611 Sum_probs=58.8
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH---------------------
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII--------------------- 159 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~--------------------- 159 (222)
....+++.+|.++|+|++|.|.+++| +.++.++ |...++++++.|+
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL---------~d~~aSl----Gk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~ 95 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDL---------RDMLASL----GKIASDEELDAMMKEAPGPINFTVFLTMFGEKLN 95 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHH---------HHHHHHc----CCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhc
Confidence 34567889999999999999999999 7776655 6667776666544
Q ss_pred --------HHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 160 --------NKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 160 --------~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
..+|..+|.++.|.|.-+.++.++..
T Consensus 96 gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt 129 (171)
T KOG0031|consen 96 GTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTT 129 (171)
T ss_pred CCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHH
Confidence 56688999999999999999998866
No 67
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.26 E-value=1e-05 Score=55.58 Aligned_cols=68 Identities=19% Similarity=0.397 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-cc-----CcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 27 TEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK-NH-----KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 27 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
.-+..+...|+++.. +.|.++..||...+.. ++ ...+..++.++..+|.|+||.|+|.||+..+..+.
T Consensus 5 ~ai~~lI~~FhkYaG---~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 5 HSMEKMMLTFHKFAG---EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHHcC---CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 347778888999985 5789999999988844 11 22566789999999999999999999999987654
No 68
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.18 E-value=1.6e-05 Score=61.84 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=83.8
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcch-HHHHHHHHHHhcCCCCcccHHHHHHHH
Q 041619 15 HAALAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQS-LIADRVFQLFDLKRDGGIEFEEFVRSL 93 (222)
Q Consensus 15 ~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~~g~i~f~eF~~~~ 93 (222)
+..++.-..|++.+|.+....|..+|.+ .||+|+..|+...+.++|.++. .-.+.+...+|.|.+|+++|.+|+-++
T Consensus 84 ~n~yteF~eFsrkqIk~~~~~Fk~yDe~--rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIf 161 (244)
T KOG0041|consen 84 FNVYTEFSEFSRKQIKDAESMFKQYDED--RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIF 161 (244)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhccc--ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHH
Confidence 3444555579999999999999999999 9999999999999999987643 345889999999999999999999998
Q ss_pred HhhCCCCC-cHHHHHHHhhh--hcCCCCCcccHHHH
Q 041619 94 SIFHPEAP-HAEKVSFAFQL--FDVSQTGFIEREEV 126 (222)
Q Consensus 94 ~~~~~~~~-~~~~~~~~F~~--~D~d~~G~I~~~el 126 (222)
........ ....+..+=+. .|...-|......|
T Consensus 162 rkaaagEL~~ds~~~~LAr~~eVDVskeGV~GAknF 197 (244)
T KOG0041|consen 162 RKAAAGELQEDSGLLRLARLSEVDVSKEGVSGAKNF 197 (244)
T ss_pred HHHhccccccchHHHHHHHhcccchhhhhhhhHHHH
Confidence 76552221 22333333333 67777776666555
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.17 E-value=2.2e-06 Score=46.18 Aligned_cols=22 Identities=36% Similarity=0.469 Sum_probs=20.6
Q ss_pred HHHHHhhhhcCCCCCcccHHHH
Q 041619 105 KVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el 126 (222)
+++.+|+.||+|++|+|+.+||
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef 22 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEF 22 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHH
Confidence 4688999999999999999999
No 70
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.11 E-value=3.7e-05 Score=52.84 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=50.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 104 ~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
..+..+|..|. .+.+.+++.||+.++.+.+ ..+ + +..-.+..++ .+|...|.|+||.|+|.||..++
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~El-p~~----l---~~~~d~~~vd----~im~~LD~n~Dg~vdF~EF~~Lv 74 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEF-SEF----L---KNQNDPMAVD----KIMKDLDDCRDGKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHh-HHH----H---cCCCCHHHHH----HHHHHhCCCCCCcCcHHHHHHHH
Confidence 35667889997 4567999999955554433 222 2 3334566664 44589999999999999999988
Q ss_pred hhCh
Q 041619 184 ARNP 187 (222)
Q Consensus 184 ~~~~ 187 (222)
....
T Consensus 75 ~~l~ 78 (91)
T cd05024 75 AGLL 78 (91)
T ss_pred HHHH
Confidence 6543
No 71
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=98.08 E-value=1.4e-05 Score=56.65 Aligned_cols=70 Identities=23% Similarity=0.420 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIF 96 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~ 96 (222)
+++++|.......|..++. ++|.|+-++.+.+|...++. ...+..|+...|.+++|.++++||+.++...
T Consensus 3 ~ls~~e~~~y~~~F~~l~~---~~g~isg~~a~~~f~~S~L~-~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP---QDGKISGDQAREFFMKSGLP-RDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS---STTEEEHHHHHHHHHHTTSS-HHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC---CCCeEeHHHHHHHHHHcCCC-HHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4678889999999999986 68999999999988777644 4667999999999999999999999987643
No 72
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=98.07 E-value=4.1e-05 Score=66.59 Aligned_cols=104 Identities=21% Similarity=0.333 Sum_probs=66.2
Q ss_pred ccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHH-HHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHH
Q 041619 49 ISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRS-LSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVK 127 (222)
Q Consensus 49 i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~-~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~ 127 (222)
++..+|+-.+...++..+...+-|- .|..+ ....+.++.. +............++.+|+.+|.+++|.|+.+||
T Consensus 282 ~~e~~f~~~~~~~~ma~ekl~egi~-~F~~d---~~~L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~- 356 (391)
T PRK12309 282 MDRATFDKMHAEDRMASEKLDEGIK-GFSKA---LETLEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEW- 356 (391)
T ss_pred CCHHHHHHHhccCchHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHH-
Confidence 4555666444333333333333222 22221 2334444442 2223334456778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhC
Q 041619 128 GVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 128 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~ 186 (222)
.. + +.+|..+|.|+||.|+++||...+...
T Consensus 357 --------~~-----------------~----~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 357 --------LG-----------------S----DAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred --------HH-----------------H----HHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 21 1 455699999999999999999988643
No 73
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.92 E-value=1.7e-05 Score=42.67 Aligned_cols=27 Identities=37% Similarity=0.628 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHh
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSI 95 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~ 95 (222)
++.+|+.+|.|++|.|+++||+.++..
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 567788888888888888888877653
No 74
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.89 E-value=0.00034 Score=51.42 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=83.5
Q ss_pred chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCC--CCCcccHHHHHHHHHHHHHHHHHHHH
Q 041619 65 QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVS--QTGFIEREEVKGVILTLLVKEMILAL 142 (222)
Q Consensus 65 ~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~el~~~~~~~~~~~~l~~~ 142 (222)
+....+.+|..+|..++|+|++.+--.+++.+- ..+....+......++.+ +-..|++++| -.+++++
T Consensus 9 ~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG-~nPT~aeV~k~l~~~~~~~~~~~rl~FE~f---------Lpm~q~v 78 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRTGDGKISGSQVGDVLRALG-QNPTNAEVLKVLGQPKRREMNVKRLDFEEF---------LPMYQQV 78 (152)
T ss_pred hHHHHHHHHHHHhccCcccccHHHHHHHHHHhc-CCCcHHHHHHHHcCcccchhhhhhhhHHHH---------HHHHHHH
Confidence 446678999999999999999999999988877 677788889998888877 5579999999 7776666
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 143 LKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 143 ~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
.++- ..-+-++.-+-+ +-+|..+.|.|...|++..+..
T Consensus 79 aknk-~q~t~edfvegL----rvFDkeg~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 79 AKNK-DQGTYEDFVEGL----RVFDKEGNGTIMGAELRHVLTT 116 (152)
T ss_pred Hhcc-ccCcHHHHHHHH----HhhcccCCcceeHHHHHHHHHH
Confidence 4442 223333433333 7999999999999999998854
No 75
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.85 E-value=0.00028 Score=61.88 Aligned_cols=87 Identities=25% Similarity=0.381 Sum_probs=68.5
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC------------------------
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA------------------------ 100 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~------------------------ 100 (222)
+||.|+.+||+ ++....-.++..-...|..+|..++|.++|+++..++.......
T Consensus 87 KDglisf~eF~-afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~n 165 (694)
T KOG0751|consen 87 KDGLISFQEFR-AFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLN 165 (694)
T ss_pred ccccccHHHHH-HHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhcc
Confidence 89999999999 66555445677778899999999999999999999887432211
Q ss_pred ----------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 041619 101 ----------PHAEKVSFAFQLFDVSQTGFIEREEVKGVILT 132 (222)
Q Consensus 101 ----------~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~ 132 (222)
-.++..+++|+..|+.++|.|+.-+++.+...
T Consensus 166 y~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt 207 (694)
T KOG0751|consen 166 YAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVT 207 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhh
Confidence 13455788999999999999999999555533
No 76
>PF14658 EF-hand_9: EF-hand domain
Probab=97.83 E-value=6.9e-05 Score=48.20 Aligned_cols=55 Identities=15% Similarity=0.329 Sum_probs=27.7
Q ss_pred HHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCC-CcccHHHH
Q 041619 72 VFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQT-GFIEREEV 126 (222)
Q Consensus 72 lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~-G~I~~~el 126 (222)
.|.++|.++.|.|.-.+++.++..+....+.+.+++.+...+|.++. |.|+++.|
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F 58 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTF 58 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHH
Confidence 34455555555555555555554444224444455555555555554 55555555
No 77
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.77 E-value=3.1e-05 Score=42.32 Aligned_cols=22 Identities=41% Similarity=0.753 Sum_probs=19.8
Q ss_pred HHHHHhhhhcCCCCCcccHHHH
Q 041619 105 KVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el 126 (222)
+++.+|+.||.|++|+|+.+||
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el 22 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEEL 22 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHH
Confidence 4788999999999999999999
No 78
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.77 E-value=0.00014 Score=56.71 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=48.2
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
...+..+|+.||.+.||+|+..|| +.||..+ |..-+ ..-++++....|-|.||+||+-+|+-.
T Consensus 98 Ik~~~~~Fk~yDe~rDgfIdl~EL---------K~mmEKL----gapQT----HL~lK~mikeVded~dgklSfreflLI 160 (244)
T KOG0041|consen 98 IKDAESMFKQYDEDRDGFIDLMEL---------KRMMEKL----GAPQT----HLGLKNMIKEVDEDFDGKLSFREFLLI 160 (244)
T ss_pred HHHHHHHHHHhcccccccccHHHH---------HHHHHHh----CCchh----hHHHHHHHHHhhcccccchhHHHHHHH
Confidence 346677899999999999999999 7766554 43322 222344448888899999999998877
Q ss_pred HhhCh
Q 041619 183 VARNP 187 (222)
Q Consensus 183 ~~~~~ 187 (222)
++..-
T Consensus 161 frkaa 165 (244)
T KOG0041|consen 161 FRKAA 165 (244)
T ss_pred HHHHh
Confidence 65543
No 79
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.75 E-value=0.00014 Score=53.80 Aligned_cols=97 Identities=20% Similarity=0.288 Sum_probs=72.5
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc-Cc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHH
Q 041619 31 ILYLLFKKLSSSLVDDGIISKEEFQLGLFKNH-KK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSF 108 (222)
Q Consensus 31 ~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~ 108 (222)
++-.+|.. + +.|.++.++|...+--.. .. .+..+...|+.+|-++++.|.-++....+..+.+.....+++..
T Consensus 75 ri~e~FSe---D--G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~ 149 (189)
T KOG0038|consen 75 RICEVFSE---D--GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVEL 149 (189)
T ss_pred HHHHHhcc---C--CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHH
Confidence 34455543 3 899999999998773322 12 23345677889999999999999999999988877777777655
Q ss_pred H----hhhhcCCCCCcccHHHHHHHHHH
Q 041619 109 A----FQLFDVSQTGFIEREEVKGVILT 132 (222)
Q Consensus 109 ~----F~~~D~d~~G~I~~~el~~~~~~ 132 (222)
+ ...-|.||+|+++..||.++|..
T Consensus 150 i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 150 ICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 5 45569999999999999665533
No 80
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.73 E-value=0.00013 Score=51.74 Aligned_cols=66 Identities=27% Similarity=0.477 Sum_probs=52.8
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHh--hcC----CCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 108 FAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLK--ESD----LILSDDIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 108 ~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~--~~g----~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
--|.+.|.|++|.|+--|+ .+++..... +.| +-.++.+++.+++.+.+.-|.|+||.|+|-||++
T Consensus 71 HYF~MHDldknn~lDGiEl---------~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIEL---------LKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcCCcchHHHH---------HHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 3689999999999999999 444443333 223 2356888999999999999999999999999987
Q ss_pred H
Q 041619 182 F 182 (222)
Q Consensus 182 ~ 182 (222)
.
T Consensus 142 ~ 142 (144)
T KOG4065|consen 142 R 142 (144)
T ss_pred h
Confidence 4
No 81
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.59 E-value=8.4e-05 Score=38.51 Aligned_cols=21 Identities=43% Similarity=0.488 Sum_probs=19.3
Q ss_pred HHHHhhhhcCCCCCcccHHHH
Q 041619 106 VSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 106 ~~~~F~~~D~d~~G~I~~~el 126 (222)
++.+|+.+|.|++|.|+.+||
T Consensus 1 l~~~F~~~D~d~DG~is~~E~ 21 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEF 21 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHH
Confidence 467899999999999999999
No 82
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.53 E-value=0.00032 Score=61.87 Aligned_cols=75 Identities=23% Similarity=0.306 Sum_probs=64.1
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc----chHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK----QSLIADRVFQLFDLKRDGGIEFEEFVRSLSI 95 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~ 95 (222)
....+|+.|++.+...|.+.| + ++|+++..++..++.+.+.. ....++.+....+.+.+|.|+|++|+.++.-
T Consensus 9 ~~~~~tq~El~~l~~kF~~~d-~--~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 9 LQSQLTQEELRELKEKFNKLD-D--QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred hcccccHHHHHHHHHHHHhhc-C--CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 455699999999999999999 5 89999999999999776544 3677889999999999999999999996554
Q ss_pred hC
Q 041619 96 FH 97 (222)
Q Consensus 96 ~~ 97 (222)
+.
T Consensus 86 l~ 87 (627)
T KOG0046|consen 86 LK 87 (627)
T ss_pred hh
Confidence 43
No 83
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.52 E-value=0.00011 Score=38.04 Aligned_cols=24 Identities=46% Similarity=0.749 Sum_probs=21.1
Q ss_pred HHHHHHhCCCCCCccCHHHHHHHH
Q 041619 160 NKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 160 ~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
+.+|..+|.|+||.|+++||.+++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 457799999999999999999854
No 84
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=97.51 E-value=0.00048 Score=55.42 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCC--CC------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHP--EA------PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMIL 140 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~--~~------~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~ 140 (222)
++.+.+.+|++++..++-.+|+........ .+ ....+.+..=..+|.|++|.+|.+|+ ..++.
T Consensus 238 VkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeEL---------e~y~d 308 (362)
T KOG4251|consen 238 VKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEEL---------EDYVD 308 (362)
T ss_pred HHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHH---------HhhcC
Confidence 466777888888888998998876432110 00 12344555667889999999999999 55432
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 141 ~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
.. .....-.++..++ ..-|.|++..++.++.+..-
T Consensus 309 P~----n~~~alne~~~~m----a~~d~n~~~~Ls~eell~r~ 343 (362)
T KOG4251|consen 309 PQ----NFRLALNEVNDIM----ALTDANNDEKLSLEELLERD 343 (362)
T ss_pred ch----hhhhhHHHHHHHH----hhhccCCCcccCHHHHHHHH
Confidence 11 2223333443333 67799999999999987643
No 85
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.49 E-value=0.00053 Score=48.59 Aligned_cols=70 Identities=29% Similarity=0.354 Sum_probs=54.6
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHH
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWK 180 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~ 180 (222)
........+|...|. ++|.|+.++. +.++... .++.+.+..+. ...|.+++|.++.+||+
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a---------~~~f~~S------~L~~~~L~~IW----~LaD~~~dG~L~~~EF~ 66 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQA---------REFFMKS------GLPRDVLAQIW----NLADIDNDGKLDFEEFA 66 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHH---------HHHHHHT------TSSHHHHHHHH----HHH-SSSSSEEEHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHH---------HHHHHHc------CCCHHHHHHHH----hhhcCCCCCcCCHHHHH
Confidence 455678889999985 6899999999 7766432 67777776555 89999999999999999
Q ss_pred HHHhhChhhh
Q 041619 181 EFVARNPSLL 190 (222)
Q Consensus 181 ~~~~~~~~~~ 190 (222)
-.++......
T Consensus 67 iAm~Li~~~~ 76 (104)
T PF12763_consen 67 IAMHLINRKL 76 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9886654443
No 86
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.48 E-value=0.0041 Score=57.43 Aligned_cols=150 Identities=16% Similarity=0.221 Sum_probs=111.7
Q ss_pred hCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 041619 21 QTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPE 99 (222)
Q Consensus 21 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~ 99 (222)
........-.-+...|+..|++ ++|.++..+...++...... ....+..+|+..+...++++.+.+|..+.....
T Consensus 127 ~~~~~~~~~~wi~~~~~~ad~~--~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~-- 202 (746)
T KOG0169|consen 127 SMRQRSRREHWIHSIFQEADKN--KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELT-- 202 (746)
T ss_pred hhhhcchHHHHHHHHHHHHccc--cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhc--
Confidence 3344555566788889999999 99999999999888766543 566788999999888999999999999887665
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
... .+..+|..+-.+ .+.++.++| ..++..... ....+.+..+++++.+-..-.....+.++.+.|
T Consensus 203 -~rp-ev~~~f~~~s~~-~~~ls~~~L---------~~Fl~~~q~--e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF 268 (746)
T KOG0169|consen 203 -KRP-EVYFLFVQYSHG-KEYLSTDDL---------LRFLEEEQG--EDGATLDEAEEIIERYEPSKEFRRHGLLSLDGF 268 (746)
T ss_pred -cCc-hHHHHHHHHhCC-CCccCHHHH---------HHHHHHhcc--cccccHHHHHHHHHHhhhhhhccccceecHHHH
Confidence 222 888888888655 899999999 776654421 234667777777754433333445567999999
Q ss_pred HHHHhhChh
Q 041619 180 KEFVARNPS 188 (222)
Q Consensus 180 ~~~~~~~~~ 188 (222)
.+++....+
T Consensus 269 ~~yL~S~~~ 277 (746)
T KOG0169|consen 269 TRYLFSPDC 277 (746)
T ss_pred HHHhcCccC
Confidence 999866443
No 87
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.44 E-value=0.00043 Score=60.33 Aligned_cols=48 Identities=33% Similarity=0.535 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 65 QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 65 ~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
....+..+|..+|.+++|.|+.+||+. +..+|..+|.|++|.|+.+||
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf 379 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEM 379 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHH
Confidence 455678999999999999999999952 467899999999999999999
No 88
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=97.34 E-value=0.00061 Score=61.60 Aligned_cols=112 Identities=26% Similarity=0.369 Sum_probs=86.5
Q ss_pred hhHHHHHhhCCCCHHHHHHHHHHHHhhcC-CCCCCC-----------cccHHHHHHHHhhccCc--chHHHHHHHHHHhc
Q 041619 13 VNHAALAAQTHFKETEIEILYLLFKKLSS-SLVDDG-----------IISKEEFQLGLFKNHKK--QSLIADRVFQLFDL 78 (222)
Q Consensus 13 ~~~~~~~~~~~~~~~ei~~l~~~F~~~d~-~~~~~G-----------~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~ 78 (222)
..++.+.+.+.||.+++..++++|+..-. ...+-| ++++..|...+..+... ....++++|+..|.
T Consensus 487 t~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~ 566 (671)
T KOG4347|consen 487 TILRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDD 566 (671)
T ss_pred HHHHhhcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhccc
Confidence 34677778889999999999999986311 100111 34555555555443222 34567999999999
Q ss_pred CCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 79 KRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 79 ~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
+.+|.++|.+++..+..++ .+...+.+..+|+++|..++ ....+|+
T Consensus 567 s~~g~Ltf~~lv~gL~~l~-~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 567 SMTGLLTFKDLVSGLSILK-AGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred CCcceeEHHHHHHHHHHHH-hhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 9999999999999999998 78889999999999999999 9998887
No 89
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.30 E-value=0.0011 Score=40.22 Aligned_cols=48 Identities=25% Similarity=0.176 Sum_probs=37.1
Q ss_pred cccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 041619 48 IISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSI 95 (222)
Q Consensus 48 ~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~ 95 (222)
+++..|+...|...... .+.++..+|+.+|++++|.++.+||..++..
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 36788888888777655 6778899999999999999999999988764
No 90
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.11 E-value=0.0045 Score=60.84 Aligned_cols=96 Identities=24% Similarity=0.415 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhC------CCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFH------PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILAL 142 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~------~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~ 142 (222)
..-+|..||.+.+|++++.+|..++.... ..+.++..++.+..+.|++.+|+|+..+. ..+|.
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY---------~afmi-- 2323 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDY---------MAFMI-- 2323 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHH---------HHHHH--
Confidence 36789999999999999999999987532 23456678999999999999999999999 77663
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHH
Q 041619 143 LKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWK 180 (222)
Q Consensus 143 ~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~ 180 (222)
..++..-.+.++|+ .+|+.++. +...|+-++.-
T Consensus 2324 ~~ETeNI~s~~eIE----~AfraL~a-~~~yvtke~~~ 2356 (2399)
T KOG0040|consen 2324 SKETENILSSEEIE----DAFRALDA-GKPYVTKEELY 2356 (2399)
T ss_pred hcccccccchHHHH----HHHHHhhc-CCccccHHHHH
Confidence 23333445666774 44578887 66678877753
No 91
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.05 E-value=0.0011 Score=35.96 Aligned_cols=26 Identities=35% Similarity=0.379 Sum_probs=15.1
Q ss_pred HHHHHHhhcCCCCCCCcccHHHHHHHHh
Q 041619 32 LYLLFKKLSSSLVDDGIISKEEFQLGLF 59 (222)
Q Consensus 32 l~~~F~~~d~~~~~~G~i~~~ef~~~l~ 59 (222)
+...|..+|.+ ++|+|+.+||+.++.
T Consensus 2 l~~~F~~~D~d--~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKD--GDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TT--SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCC--CCCcCcHHHHHHHHH
Confidence 44555566666 666666666666554
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.05 E-value=0.00061 Score=49.06 Aligned_cols=64 Identities=23% Similarity=0.452 Sum_probs=41.1
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
......+...|..+|.|+||.|+..|+ +.+... -...+. .++.+|...|.|+||.||..||
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El---------~~l~~~-------l~~~e~---C~~~F~~~CD~n~d~~Is~~EW 110 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSEL---------KPLRRP-------LMPPEH---CARPFFRSCDVNKDGKISLDEW 110 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTT---------GGGGST-------TSTTGG---GHHHHHHHH-TT-SSSEEHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHH---------HHHHHH-------HhhhHH---HHHHHHHHcCCCCCCCCCHHHH
Confidence 355677889999999999999999999 443211 112111 2355669999999999999999
Q ss_pred HHH
Q 041619 180 KEF 182 (222)
Q Consensus 180 ~~~ 182 (222)
..+
T Consensus 111 ~~C 113 (113)
T PF10591_consen 111 CNC 113 (113)
T ss_dssp HHH
T ss_pred ccC
Confidence 753
No 93
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.04 E-value=0.0027 Score=55.26 Aligned_cols=82 Identities=18% Similarity=0.292 Sum_probs=62.8
Q ss_pred CCCcccHHHHHHHHhhccC-------------cchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC---CCCCcHHHHHH
Q 041619 45 DDGIISKEEFQLGLFKNHK-------------KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH---PEAPHAEKVSF 108 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~-------------~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~---~~~~~~~~~~~ 108 (222)
.+|.+.+....+.+..... .....++.+|+.+|.+++|.|+.+||..++..+. +..-....+..
T Consensus 512 ~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~ 591 (631)
T KOG0377|consen 512 DDGKVEYKSTLDNLDTEVILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILE 591 (631)
T ss_pred cCcceehHhHHHHhhhhhHHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHH
Confidence 5677777766554422111 1223358899999999999999999999987654 34456788899
Q ss_pred HhhhhcCCCCCcccHHHH
Q 041619 109 AFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 109 ~F~~~D~d~~G~I~~~el 126 (222)
+-+.+|.|+||.|+..||
T Consensus 592 la~~mD~NkDG~IDlNEf 609 (631)
T KOG0377|consen 592 LARSMDLNKDGKIDLNEF 609 (631)
T ss_pred HHHhhccCCCCcccHHHH
Confidence 999999999999999999
No 94
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.02 E-value=0.0075 Score=52.76 Aligned_cols=90 Identities=21% Similarity=0.365 Sum_probs=54.3
Q ss_pred HHHhhcCCCCCCCcccHHHHHHHHhhcc-Ccc-----------h----HHHHHHHHHHhcCCCCcccHHHHHHH-----H
Q 041619 35 LFKKLSSSLVDDGIISKEEFQLGLFKNH-KKQ-----------S----LIADRVFQLFDLKRDGGIEFEEFVRS-----L 93 (222)
Q Consensus 35 ~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~~-----------~----~~~~~lf~~~d~~~~g~i~f~eF~~~-----~ 93 (222)
.+..++.. +.|++...+|...|..+- ..+ + -.+.++|-.++..++|.|+..+.+.. +
T Consensus 179 ~v~~l~~~--~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l 256 (493)
T KOG2562|consen 179 FVNLLIQA--GCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDAL 256 (493)
T ss_pred HHHHHhcc--CccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHH
Confidence 34444444 677777777776664421 111 0 11467888888899999998886653 2
Q ss_pred HhhCCCCC--------cHHHHHHH---hhhhcCCCCCcccHHHH
Q 041619 94 SIFHPEAP--------HAEKVSFA---FQLFDVSQTGFIEREEV 126 (222)
Q Consensus 94 ~~~~~~~~--------~~~~~~~~---F~~~D~d~~G~I~~~el 126 (222)
........ .-+....+ |..+|+|++|.|+.+++
T Consensus 257 ~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L 300 (493)
T KOG2562|consen 257 LELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDL 300 (493)
T ss_pred HHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHH
Confidence 21110000 11222334 77889999999999999
No 95
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.98 E-value=0.00059 Score=49.12 Aligned_cols=59 Identities=20% Similarity=0.339 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHH
Q 041619 29 IEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFV 90 (222)
Q Consensus 29 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~ 90 (222)
...+.-.|..+|.+ +||.|+..|+..+...+ ..++.-+...+..+|.|+||.|+..|+.
T Consensus 53 ~~~~~W~F~~LD~n--~d~~L~~~El~~l~~~l-~~~e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 53 KRVVHWKFCQLDRN--KDGVLDRSELKPLRRPL-MPPEHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHHHH--T---SSEE-TTTTGGGGSTT-STTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhhhHhhhcCC--CCCccCHHHHHHHHHHH-hhhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 34444445555554 55555555554322211 2233333444555555555555555543
No 96
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.53 E-value=0.0085 Score=36.42 Aligned_cols=48 Identities=25% Similarity=0.539 Sum_probs=32.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 121 IEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 121 I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
++..|+ +.+|.. +...++++-+ ..+|..+|.+++|.+.-+||..++..
T Consensus 2 msf~Ev---------k~lLk~----~NI~~~~~yA----~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEV---------KKLLKM----MNIEMDDEYA----RQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHH---------HHHHHH----TT----HHHH----HHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHH---------HHHHHH----HccCcCHHHH----HHHHHHhcccCCCCccHHHHHHHHHH
Confidence 677888 554443 3777777666 55669999999999999999998864
No 97
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.46 E-value=0.0098 Score=52.83 Aligned_cols=68 Identities=16% Similarity=0.299 Sum_probs=49.5
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
...++..|...| +++|+|+..|+ ..++.......| ....+++++++ ...++|.+|+|++|+|+..
T Consensus 18 l~~l~~kF~~~d-~~~G~v~~~~l---------~~~f~k~~~~~g-~~~~eei~~~l----~~~~~~~~g~v~fe~f~~~ 82 (627)
T KOG0046|consen 18 LRELKEKFNKLD-DQKGYVTVYEL---------PDAFKKAKLPLG-YFVREEIKEIL----GEVGVDADGRVEFEEFVGI 82 (627)
T ss_pred HHHHHHHHHhhc-CCCCeeehHHh---------HHHHHHhccccc-chhHHHHHHHH----hccCCCcCCccCHHHHHHH
Confidence 456778899999 99999999999 655544321111 23345555554 8999999999999999995
Q ss_pred Hhh
Q 041619 183 VAR 185 (222)
Q Consensus 183 ~~~ 185 (222)
+..
T Consensus 83 ~~~ 85 (627)
T KOG0046|consen 83 FLN 85 (627)
T ss_pred HHh
Confidence 543
No 98
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=96.27 E-value=0.016 Score=38.95 Aligned_cols=71 Identities=15% Similarity=0.304 Sum_probs=51.3
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDL-ILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~-~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
++..+|..|.. +.+.|+.++| ..+|.... +. ..+++++..+++..-........+.+|+++|..++
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f---------~~FL~~eQ---~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEF---------RRFLREEQ---GEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHH---------HHHHHHTS---S-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHH---------HHHHHHHh---ccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHH
Confidence 36789999955 8999999999 77764432 33 56889998888554333333356899999999999
Q ss_pred hhChh
Q 041619 184 ARNPS 188 (222)
Q Consensus 184 ~~~~~ 188 (222)
....+
T Consensus 68 ~S~~N 72 (83)
T PF09279_consen 68 FSDEN 72 (83)
T ss_dssp HSTTC
T ss_pred CCCcC
Confidence 76543
No 99
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.04 E-value=0.012 Score=29.91 Aligned_cols=26 Identities=46% Similarity=0.678 Sum_probs=22.5
Q ss_pred HHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 160 NKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 160 ~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
+.+|..+|.+++|.|++.+|..++..
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 45668999999999999999998864
No 100
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.92 E-value=0.012 Score=29.90 Aligned_cols=21 Identities=43% Similarity=0.580 Sum_probs=19.5
Q ss_pred HHHHhhhhcCCCCCcccHHHH
Q 041619 106 VSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 106 ~~~~F~~~D~d~~G~I~~~el 126 (222)
++.+|+.+|.+++|.|+..||
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~ 22 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEF 22 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHH
Confidence 577999999999999999999
No 101
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.70 E-value=0.054 Score=38.67 Aligned_cols=69 Identities=14% Similarity=0.264 Sum_probs=46.7
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh------c-----cCcchHHHHH----HHHHHhcCCCCcc
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK------N-----HKKQSLIADR----VFQLFDLKRDGGI 84 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~------~-----~~~~~~~~~~----lf~~~d~~~~g~i 84 (222)
+..++|+++++- .-|...|-+ ++|.++--|+..++.- . +..++.+.+. +++--|.|++|.|
T Consensus 59 ~~a~mtpeqlqf--HYF~MHDld--knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~I 134 (144)
T KOG4065|consen 59 KVAKMTPEQLQF--HYFSMHDLD--KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVI 134 (144)
T ss_pred hhhhCCHHHHhh--hhhhhhccC--cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCcee
Confidence 356788887764 447777777 8999999999888732 1 1223334444 4444577788999
Q ss_pred cHHHHHHH
Q 041619 85 EFEEFVRS 92 (222)
Q Consensus 85 ~f~eF~~~ 92 (222)
+|-||+..
T Consensus 135 DYgEflK~ 142 (144)
T KOG4065|consen 135 DYGEFLKR 142 (144)
T ss_pred eHHHHHhh
Confidence 99998753
No 102
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=95.55 E-value=0.13 Score=35.31 Aligned_cols=82 Identities=13% Similarity=0.297 Sum_probs=48.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
.++.+.+|+.+ .|++|.++...|...+ +++++ +....|...+-.-++..++..|... .....|+.++|+.|
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL-----~d~lq-ip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~w 72 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLL-----HDVLQ-IPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDW 72 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHH-----HHHHH-HHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHH-----HHHHH-HHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHH
Confidence 46889999999 7999999999994444 33332 2233343332222666677777765 34567999999999
Q ss_pred HhhChhhhhhc
Q 041619 183 VARNPSLLKNM 193 (222)
Q Consensus 183 ~~~~~~~~~~~ 193 (222)
+...|-.+-++
T Consensus 73 l~~ePq~lVWL 83 (90)
T PF09069_consen 73 LMSEPQSLVWL 83 (90)
T ss_dssp HHT--TTTTHH
T ss_pred HHhCCCeeeHH
Confidence 99999876665
No 103
>PLN02952 phosphoinositide phospholipase C
Probab=95.23 E-value=0.22 Score=45.91 Aligned_cols=95 Identities=15% Similarity=0.235 Sum_probs=66.1
Q ss_pred CCCcccHHHHHHHHHhhC-CCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q 041619 80 RDGGIEFEEFVRSLSIFH-PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAI 158 (222)
Q Consensus 80 ~~g~i~f~eF~~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~ 158 (222)
+.|.++|.+|..+...+. +...+..++..+|..|-. +.+.++.++| ..+|.....+ ...+.+.++.+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l---------~~FL~~~Q~e--~~~~~~~~~~i 80 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQL---------RRFLVLHQDE--LDCTLAEAQRI 80 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHH---------HHHHHHhCCC--cCCCHHHHHHH
Confidence 468999999998877664 234477899999999954 4478999999 7776554321 23566777777
Q ss_pred HHHHHHHhC---CCCCCccCHHHHHHHHhhC
Q 041619 159 INKAFEDAD---FKGDGKIDPEEWKEFVARN 186 (222)
Q Consensus 159 ~~~~f~~~d---~~~dg~Is~eeF~~~~~~~ 186 (222)
++.++.... ..+.+.++++.|..++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 81 VEEVINRRHHVTRYTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred HHHHHhhccccccccccCcCHHHHHHHHcCc
Confidence 655443322 1223469999999999753
No 104
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=95.04 E-value=0.016 Score=48.69 Aligned_cols=70 Identities=27% Similarity=0.363 Sum_probs=52.6
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
+.-+..-|..+|+|+++.|.+.|+ +.+=.-+.+. .......+.+|+..|.|+|..||+.||+..
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEw---------KpFK~~l~k~-------s~~rkC~rk~~~yCDlNkDKkISl~Ew~~C 395 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREW---------KPFKRVLLKK-------SKPRKCSRKFFKYCDLNKDKKISLDEWRGC 395 (421)
T ss_pred hheeeeeeeeecccccCccchhhc---------chHHHHHHhh-------ccHHHHhhhcchhcccCCCceecHHHHhhh
Confidence 345788899999999999999998 4432222211 123344577789999999999999999999
Q ss_pred HhhChh
Q 041619 183 VARNPS 188 (222)
Q Consensus 183 ~~~~~~ 188 (222)
+...+.
T Consensus 396 L~~~~~ 401 (421)
T KOG4578|consen 396 LGVEKE 401 (421)
T ss_pred hccccc
Confidence 876665
No 105
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.32 E-value=0.12 Score=48.19 Aligned_cols=95 Identities=24% Similarity=0.376 Sum_probs=73.5
Q ss_pred CCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 041619 81 DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIIN 160 (222)
Q Consensus 81 ~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~ 160 (222)
++ ++++||. ....+.+.+++..|..+|. ++|.++.+++..++ .................++..
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 64 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELI---------MSSISANWLSLIKKQTEEYAA 64 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHH---------HHHHHhhhhhhhhhhhhHHHH
Confidence 46 8999998 3367889999999999998 99999999995555 333332232344556667777
Q ss_pred HHHHHhCCCCCCccCHHHHHHHHhhChhhhhh
Q 041619 161 KAFEDADFKGDGKIDPEEWKEFVARNPSLLKN 192 (222)
Q Consensus 161 ~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~ 192 (222)
.++...|.+..|.+.++++...+...|...-.
T Consensus 65 ~~~~~~~~~~~~y~~~~~~~~ll~~~~~~~~~ 96 (646)
T KOG0039|consen 65 LIMEELDPDHKGYITNEDLEILLLQIPTLLFA 96 (646)
T ss_pred HhhhhccccccceeeecchhHHHHhchHHHHH
Confidence 88899999999999999999999988865543
No 106
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=93.86 E-value=0.15 Score=42.75 Aligned_cols=70 Identities=19% Similarity=0.311 Sum_probs=47.2
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCHHHHHH-------HHHHHHHHhCCCCCCccCHHH
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKE-SDLILSDDIIEA-------IINKAFEDADFKGDGKIDPEE 178 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~-~g~~~~~~~i~~-------~~~~~f~~~d~~~dg~Is~ee 178 (222)
+..|.+.|.|++|+++..|+..++ ..-+.. ..+.-.+.+..+ |-..++..+|+|.|..||.+|
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLF---------tkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleE 317 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALF---------TKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEE 317 (442)
T ss_pred chheeeeccCCcccccHHHHHHHH---------HHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHH
Confidence 457899999999999999994444 322222 122222222222 335578899999999999999
Q ss_pred HHHHHhh
Q 041619 179 WKEFVAR 185 (222)
Q Consensus 179 F~~~~~~ 185 (222)
|++.-.+
T Consensus 318 FL~~t~~ 324 (442)
T KOG3866|consen 318 FLNDTDN 324 (442)
T ss_pred HHhhhhh
Confidence 9986544
No 107
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=93.65 E-value=0.27 Score=41.51 Aligned_cols=93 Identities=15% Similarity=0.081 Sum_probs=73.7
Q ss_pred HHHHHHHHhhcCCCCCCCcccHHHHHHHHhhc-cCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHH
Q 041619 30 EILYLLFKKLSSSLVDDGIISKEEFQLGLFKN-HKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVS 107 (222)
Q Consensus 30 ~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~-~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~ 107 (222)
..+..+|..+|.+ ++|.+++.+-...+.-+ +.. ....++--|+.++...||.++-.++-.++.... +...-++-
T Consensus 259 d~l~~~f~LFde~--~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l--gv~~l~v~ 334 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG--TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL--GVEVLRVP 334 (412)
T ss_pred hhhhhhhheecCC--CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc--Ccceeecc
Confidence 5677788888888 99999998877666332 222 456678899999999999999877777666543 45666788
Q ss_pred HHhhhhcCCCCCcccHHHH
Q 041619 108 FAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 108 ~~F~~~D~d~~G~I~~~el 126 (222)
..|..+++..+|+|+.++|
T Consensus 335 ~lf~~i~q~d~~ki~~~~f 353 (412)
T KOG4666|consen 335 VLFPSIEQKDDPKIYASNF 353 (412)
T ss_pred ccchhhhcccCcceeHHHH
Confidence 8999999999999999999
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.65 E-value=0.2 Score=33.53 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-CCcHHHHHHHhhhhcCC----CCCcccHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPE-APHAEKVSFAFQLFDVS----QTGFIEREEV 126 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~-~~~~~~~~~~F~~~D~d----~~G~I~~~el 126 (222)
++.+|..+.. +.+.|+.++|..++....+. ....+.+..++..|..+ ..+.++.++|
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF 63 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGF 63 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHH
Confidence 4667777755 56778888888888766644 23567777777777554 4689999999
No 109
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.04 E-value=0.27 Score=43.74 Aligned_cols=74 Identities=18% Similarity=0.260 Sum_probs=62.6
Q ss_pred hCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 21 QTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 21 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
...+|.++.....+.|+.+-.+ .+|+|+-.--+.+|.+..+ +-.++..|+++.|.++||.++..||.++++.+.
T Consensus 222 pw~IT~EQReYYvnQFrtvQpD--p~gfisGsaAknFFtKSkl-pi~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 222 PWQITPEQREYYVNQFRTVQPD--PHGFISGSAAKNFFTKSKL-PIEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred ccccCHHHHHHHHhhhhcccCC--cccccccHHHHhhhhhccC-chHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 3458899999999999999888 8999999988888877653 344568999999999999999999999987644
No 110
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=92.91 E-value=0.57 Score=44.80 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=77.4
Q ss_pred hCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchH---HHHHHHHH---HhcCCCCcccHHHHHHHHH
Q 041619 21 QTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSL---IADRVFQL---FDLKRDGGIEFEEFVRSLS 94 (222)
Q Consensus 21 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~---~~~~lf~~---~d~~~~g~i~f~eF~~~~~ 94 (222)
....++..+.++...|...+.. ..|.+++++|..+|..+|..... .....|+. .|.+.-|.++|.+|...+.
T Consensus 738 sk~~sQ~v~~ElrAle~~~~~~--d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~ 815 (890)
T KOG0035|consen 738 SKGTSQYVLDELRALENEQDKI--DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLE 815 (890)
T ss_pred ccchhHHHHHHHHHHHhHHHHh--hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhh
Confidence 3345666677788888877776 78889999999999888765332 23344444 4545558999999999998
Q ss_pred hhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 95 IFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 95 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
......+...++..+|+.+-++.. +|..+||
T Consensus 816 R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL 846 (890)
T KOG0035|consen 816 REYEDLDTELRAILAFEDWAKTKA-YLLLEEL 846 (890)
T ss_pred hhhhhhcHHHHHHHHHHHHHcchh-HHHHHHH
Confidence 776566778889999999977776 8888888
No 111
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=92.78 E-value=0.71 Score=35.04 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=47.9
Q ss_pred HHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc----chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 30 EILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK----QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 30 ~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
+.++..|..+... +...|+...|..++...+.. ....++.+|..+-..+...|+|++|+.++..+.
T Consensus 2 ~~~F~~f~~fG~~--~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA 71 (154)
T PF05517_consen 2 EAVFKAFASFGKK--NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELA 71 (154)
T ss_dssp HHHHHHHHCSSTS--TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHH
Confidence 4556666655554 66799999999999776542 455678999998777777899999999987554
No 112
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=92.62 E-value=0.19 Score=42.65 Aligned_cols=63 Identities=22% Similarity=0.429 Sum_probs=49.8
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
...+-.+|..+|.|.+|.++..|+ +.+- +.. -+..++-+|+..|...||.|+-.||...
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl---------~~I~----------ldk--nE~CikpFfnsCD~~kDg~iS~~EWC~C 307 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSEL---------RAIE----------LDK--NEACIKPFFNSCDTYKDGSISTNEWCYC 307 (434)
T ss_pred hhhhhhhhhccccccccccCHHHh---------hhhh----------ccC--chhHHHHHHhhhcccccCccccchhhhh
Confidence 467899999999999999999999 6532 111 1223466669999999999999999998
Q ss_pred HhhC
Q 041619 183 VARN 186 (222)
Q Consensus 183 ~~~~ 186 (222)
+.+.
T Consensus 308 F~k~ 311 (434)
T KOG3555|consen 308 FQKS 311 (434)
T ss_pred hccC
Confidence 8653
No 113
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=92.49 E-value=0.39 Score=41.20 Aligned_cols=173 Identities=15% Similarity=0.244 Sum_probs=91.1
Q ss_pred CCccccccccCchhHHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc--CcchHHHHHHHHHHhc
Q 041619 1 MGCVCMKQRLKSVNHAALAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNH--KKQSLIADRVFQLFDL 78 (222)
Q Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~ 78 (222)
|||+.|+. +++..+... +.+.+-...+..... .....+.+.+........ .-.+...+.+|.....
T Consensus 1 mgn~n~kr----~~~~~~naE------~~~~l~~~kk~~~~g--a~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~ 68 (427)
T KOG2557|consen 1 MGNSNSKR----VDHRFINAE------TQKKLDDLKKLFVSG--ASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQ 68 (427)
T ss_pred CCCccccc----ccccccCHH------HHHHHHHHhhccccc--cchhhhhhhhhhcccccchhhhhhhccceEeeeccC
Confidence 89988888 335555444 344444444333221 224455555543321110 0112223344444433
Q ss_pred C-CCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHH-HH
Q 041619 79 K-RDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDI-IE 156 (222)
Q Consensus 79 ~-~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~-i~ 156 (222)
. .+-.++++.+........ .+...+..+.++...|.+++|.....++...+ ..++..... +.....+. +.
T Consensus 69 ~~q~~~~~l~k~~~~~~~~~-~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~-----~~vlks~~~--~ess~~es~~~ 140 (427)
T KOG2557|consen 69 RRQDDKMTLEKLVIAKATYE-KGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFL-----VVVLKSVFS--TESSDAESSDY 140 (427)
T ss_pred ccCCccchHHHHhhHHhhhc-cCcccHHHHHHHHHHhhccccccchhHHHHHH-----HHHhhheee--ecccchhhhhh
Confidence 2 234689999888776665 66788889999999999999999999993333 333332211 11111111 11
Q ss_pred HHHHHHH---HHh---CCCCCCccCHHHHHHHHhhChhhhhhc
Q 041619 157 AIINKAF---EDA---DFKGDGKIDPEEWKEFVARNPSLLKNM 193 (222)
Q Consensus 157 ~~~~~~f---~~~---d~~~dg~Is~eeF~~~~~~~~~~~~~~ 193 (222)
...+..| +.+ +.+..+.-.+|.|+.++...|-+.+.+
T Consensus 141 ~~~d~af~~~~~~~ke~e~t~p~~~le~~~s~~p~f~~i~r~~ 183 (427)
T KOG2557|consen 141 KKMDDAFLNAATFSKEDEGTEPGMSLEDFRSWCPFFPTIRKFL 183 (427)
T ss_pred hhhhccccchhhhccccccCCCchhHHHHhhhchHHHHHHHHH
Confidence 1111111 112 223334567777877777766666643
No 114
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=92.24 E-value=2.5 Score=39.68 Aligned_cols=116 Identities=22% Similarity=0.269 Sum_probs=79.8
Q ss_pred chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHH----HHHH
Q 041619 65 QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVK----EMIL 140 (222)
Q Consensus 65 ~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~----~~l~ 140 (222)
...++..+|...|++.+|.+++.+-+.++..+. ..-....++..|+..|..++|.+...++.........+ .++.
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n-~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rpev~~~f~ 212 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLN-VQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRPEVYFLFV 212 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHH-HhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCchHHHHHH
Confidence 345678999999999999999999999887665 45677888999999999999999999995555444222 1111
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChh
Q 041619 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPS 188 (222)
Q Consensus 141 ~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~ 188 (222)
.... -+..++..++..+++ .. .+.+.++.+++.+.+.+...
T Consensus 213 ~~s~-~~~~ls~~~L~~Fl~----~~--q~e~~~~~~~ae~ii~~~e~ 253 (746)
T KOG0169|consen 213 QYSH-GKEYLSTDDLLRFLE----EE--QGEDGATLDEAEEIIERYEP 253 (746)
T ss_pred HHhC-CCCccCHHHHHHHHH----Hh--cccccccHHHHHHHHHHhhh
Confidence 1111 134566666655553 22 44455777777777765543
No 115
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=91.75 E-value=1.7 Score=39.75 Aligned_cols=154 Identities=19% Similarity=0.221 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-ccCc-chHH---HHHHHHHHhcCC--CCcccHHHHHHHHHh
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK-NHKK-QSLI---ADRVFQLFDLKR--DGGIEFEEFVRSLSI 95 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~-~~~~---~~~lf~~~d~~~--~g~i~f~eF~~~~~~ 95 (222)
.++..-++.|..+|...|.+ .+|.++-.|+...-.+ .+.. .... ++...+..-.++ ++.++..-|+-.-..
T Consensus 188 elkp~~v~al~RIFki~D~d--~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~l 265 (625)
T KOG1707|consen 188 ELKPRCVKALKRIFKISDSD--NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTL 265 (625)
T ss_pred cccHHHHHHHHHHHhhhccc--cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHH
Confidence 46778899999999999999 9999999998754332 2222 2222 233333333322 455777778877666
Q ss_pred hCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccC
Q 041619 96 FHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKID 175 (222)
Q Consensus 96 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is 175 (222)
+... ...+....+.+.|-.+.+-.++.+=+ ..-+.. .-.....+++.-+ .++..+|..+|.|+||.++
T Consensus 266 fier-gr~EttW~iLR~fgY~DsleL~~~~l---------~p~~~~-~p~~s~ELs~~~~-~Fl~~~f~~~D~d~Dg~L~ 333 (625)
T KOG1707|consen 266 FIER-GRHETTWTILRKFGYTDSLELTDEYL---------PPRLKV-PPDQSVELSPKGY-RFLVDVFEKFDRDNDGALS 333 (625)
T ss_pred HHHh-ccccchhhhhhhcCCcchhhhhhhhc---------CccccC-CCCcceeccHHHH-HHHHHHHHhccCCCCCCcC
Confidence 6533 33333344555554333333333222 111000 0001134455444 4557889999999999999
Q ss_pred HHHHHHHHhhChhhh
Q 041619 176 PEEWKEFVARNPSLL 190 (222)
Q Consensus 176 ~eeF~~~~~~~~~~~ 190 (222)
.+|+..+....|..-
T Consensus 334 p~El~~LF~~~P~~p 348 (625)
T KOG1707|consen 334 PEELKDLFSTAPGSP 348 (625)
T ss_pred HHHHHHHhhhCCCCC
Confidence 999999988877654
No 116
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.71 E-value=0.15 Score=49.10 Aligned_cols=143 Identities=20% Similarity=0.326 Sum_probs=108.1
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC--C
Q 041619 22 THFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP--E 99 (222)
Q Consensus 22 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~--~ 99 (222)
..++.++.......|..+.. ++|.++-...+.+|...++.. ....+++...|.+.+|.+++.||...++.... .
T Consensus 121 p~~~~qe~aky~q~f~s~~p---~~g~~sg~~~~pil~~s~Lp~-~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~ 196 (847)
T KOG0998|consen 121 PAITPQEQAKYDQIFRSLSP---SNGLLSGDKAKPILLNSKLPS-DVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLN 196 (847)
T ss_pred CCCCHHHHHHHHHHHhccCC---CCCccccchhhhhhhcCCCCh-hhhccccccccccccCCCChhhhhhhhhHHHHHhh
Confidence 45889999999999999988 689999999988886665443 34568899999999999999999988753110 0
Q ss_pred --------------------------------------------------------------------------------
Q 041619 100 -------------------------------------------------------------------------------- 99 (222)
Q Consensus 100 -------------------------------------------------------------------------------- 99 (222)
T Consensus 197 ~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~ 276 (847)
T KOG0998|consen 197 GNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPK 276 (847)
T ss_pred cccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCcc
Confidence
Q ss_pred --CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHH
Q 041619 100 --APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPE 177 (222)
Q Consensus 100 --~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~e 177 (222)
.........+|...|.+.+|.|+..+. +..+.. ..++...++..+ ...|+.+.|.+++.
T Consensus 277 vsp~d~~~~~~if~q~d~~~dG~I~s~~~---------~~~f~~------~gl~~~~l~~~w----~l~d~~n~~~ls~~ 337 (847)
T KOG0998|consen 277 VSPSDKQKYSKIFSQVDKDNDGSISSNEA---------RNIFLP------FGLSKPRLAHVW----LLADTQNTGTLSKD 337 (847)
T ss_pred cChHHHHHHHHHHHhccccCCCccccccc---------cccccc------CCCChhhhhhhh----hhcchhccCccccc
Confidence 011234556899999999999999999 665533 355556665555 89999999999999
Q ss_pred HHHHHHhhCh
Q 041619 178 EWKEFVARNP 187 (222)
Q Consensus 178 eF~~~~~~~~ 187 (222)
+|.-.+....
T Consensus 338 ef~~~~~~~~ 347 (847)
T KOG0998|consen 338 EFALAMHLLE 347 (847)
T ss_pred ccchhhhhhh
Confidence 9876664433
No 117
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=91.39 E-value=2.9 Score=30.63 Aligned_cols=94 Identities=11% Similarity=0.150 Sum_probs=52.3
Q ss_pred hHHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHH-HHH
Q 041619 14 NHAALAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEF-VRS 92 (222)
Q Consensus 14 ~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF-~~~ 92 (222)
.+..+++...+..=.+..+...|....-+...+..++..++...| ..+|....+...+..+.... +..
T Consensus 25 KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L-----------~~iy~~l~~~~p~~~~i~~~~v~~ 93 (127)
T PF09068_consen 25 KLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLL-----------SSIYEFLNKRLPTLHQIPSRPVDL 93 (127)
T ss_dssp HHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHH-----------HHHHHHHHHHSTTS--HH-----H
T ss_pred HHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-----------HHHHHHHHHHCCCCCCCCchhHHH
Confidence 367788888888888888888888875542235678888888766 44554443333332322200 000
Q ss_pred HHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 93 LSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 93 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
..+--+.++...||.+++|.|+.-.+
T Consensus 94 --------a~~L~ln~Ll~vyD~~rtG~I~vls~ 119 (127)
T PF09068_consen 94 --------AVDLLLNWLLNVYDSQRTGKIRVLSF 119 (127)
T ss_dssp --------HHHHHHHHHHHHH-TT--SEEEHHHH
T ss_pred --------HHHHHHHHHHHHhCCCCCCeeehhHH
Confidence 11223577888888888888888888
No 118
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=91.16 E-value=0.81 Score=41.60 Aligned_cols=78 Identities=13% Similarity=0.061 Sum_probs=67.7
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc-CcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNH-KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
....++++++...+..|..+|.+ +.|+++..+....++..+ ..+....+.+.+..+.+-+|.+...||...++....
T Consensus 583 ~~i~~~~~~~~~~~~rf~~lD~~--k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 583 IPIKLTPEDFLRRKTRFAFLDAD--KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred cccccCHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 34568999999999999999998 899999999999998877 447777899999999998999999999999887664
Q ss_pred C
Q 041619 99 E 99 (222)
Q Consensus 99 ~ 99 (222)
.
T Consensus 661 g 661 (680)
T KOG0042|consen 661 G 661 (680)
T ss_pred C
Confidence 3
No 119
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.31 E-value=0.48 Score=44.43 Aligned_cols=70 Identities=17% Similarity=0.269 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSI 95 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~ 95 (222)
+.....-.....+|..+|+. ..|+++-.+-+.+|...++. ...+..|+.+-|.|+||+++-+||+.++..
T Consensus 188 AVp~~~klKY~QlFNa~Dkt--rsG~Lsg~qaR~aL~qS~Lp-q~~LA~IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 188 AVPQHNKLKYRQLFNALDKT--RSGYLSGQQARSALGQSGLP-QNQLAHIWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred cccchhhhHHHHHhhhcccc--cccccccHHHHHHHHhcCCc-hhhHhhheeeeccCCCCcccHHHHHHHHHH
Confidence 34445566788899999998 99999999999999777644 445578899999999999999999987653
No 120
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=90.30 E-value=1.8 Score=43.45 Aligned_cols=60 Identities=13% Similarity=0.257 Sum_probs=47.1
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 108 FAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 108 ~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
.-|+.||.||.|.|+..+| ...+.. ....+..+++-++ .-...|.+...+|++|+.-+..
T Consensus 4061 dtfkeydpdgkgiiskkdf---------~kame~-----~k~ytqse~dfll----scae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDF---------HKAMEG-----HKHYTQSEIDFLL----SCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred ccchhcCCCCCccccHHHH---------HHHHhc-----cccchhHHHHHHH----HhhccCccccccHHHHHHHhcC
Confidence 4689999999999999999 766543 3456677776666 6677788889999999887643
No 121
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=90.27 E-value=1 Score=31.33 Aligned_cols=63 Identities=19% Similarity=0.292 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCC---CCcccHHHHHHHHHhhC
Q 041619 28 EIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKR---DGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 28 ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~---~g~i~f~eF~~~~~~~~ 97 (222)
.-..+...|+++. .+|+|++..|..++ |+. +.+.+.+||..+.... ...|+-+|...+|..+.
T Consensus 28 ~W~~VE~RFd~La----~dG~L~rs~Fg~CI---GM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 28 GWKEVEKRFDKLA----KDGLLPRSDFGECI---GMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQIS 94 (100)
T ss_dssp -HHHHHHHHHHH-----BTTBEEGGGHHHHH---T--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC----cCCcccHHHHHHhc---CCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhh
Confidence 4678899999997 57999999999998 444 6778899999876532 35789898888887654
No 122
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=90.12 E-value=0.44 Score=35.43 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=38.3
Q ss_pred cccccccCchhHHHHHhhCCCCHHHHHHHHHHHHhhc----CCCCCCCcccHHHHHHHHhhc-c-CcchHHHHHHHHHHh
Q 041619 4 VCMKQRLKSVNHAALAAQTHFKETEIEILYLLFKKLS----SSLVDDGIISKEEFQLGLFKN-H-KKQSLIADRVFQLFD 77 (222)
Q Consensus 4 ~~s~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d----~~~~~~G~i~~~ef~~~l~~~-~-~~~~~~~~~lf~~~d 77 (222)
.+.+++. +++.++++...++...+.++..-|+.-. -+ +.+.|+++.|+.++..- . ..++..++.+|..+-
T Consensus 4 ~~~~lsp--~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~--~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~ 79 (138)
T PF14513_consen 4 EWVSLSP--EEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYN--PEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQ 79 (138)
T ss_dssp --S-S-H--HHHHHHHHHHHH----HHHHHHHH-HTSGGGGGE--ETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS-
T ss_pred ceeccCH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 3445544 9999999999999999999999986210 01 34567777777665331 1 136666777777665
Q ss_pred cC
Q 041619 78 LK 79 (222)
Q Consensus 78 ~~ 79 (222)
..
T Consensus 80 ~~ 81 (138)
T PF14513_consen 80 KK 81 (138)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 123
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=88.59 E-value=1.5 Score=37.51 Aligned_cols=98 Identities=14% Similarity=0.028 Sum_probs=68.4
Q ss_pred CCCCHHHHHH----HHHHHHhhcCCCCCCCcccHHHHHHHHhh----ccCcchHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 041619 22 THFKETEIEI----LYLLFKKLSSSLVDDGIISKEEFQLGLFK----NHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSL 93 (222)
Q Consensus 22 ~~~~~~ei~~----l~~~F~~~d~~~~~~G~i~~~ef~~~l~~----~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~ 93 (222)
.+.|.+|+++ |.+.|+.+-.+ .++......+..+-.. ++..=...+.-||..+|.|.++.++-.|...+.
T Consensus 199 ~~Ct~qeL~~lg~RL~dWF~~lhe~--s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ 276 (434)
T KOG3555|consen 199 YACTDQELRRLGNRLRDWFKALHED--SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIE 276 (434)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhh--hhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhh
Confidence 4577887765 55666665443 4454444444433211 111223346789999999999999999977664
Q ss_pred HhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 94 SIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 94 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
....+.-++-.|...|...+|.|+-.|+
T Consensus 277 -----ldknE~CikpFfnsCD~~kDg~iS~~EW 304 (434)
T KOG3555|consen 277 -----LDKNEACIKPFFNSCDTYKDGSISTNEW 304 (434)
T ss_pred -----ccCchhHHHHHHhhhcccccCccccchh
Confidence 3456778999999999999999999999
No 124
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.84 E-value=1.4 Score=39.44 Aligned_cols=63 Identities=21% Similarity=0.220 Sum_probs=49.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 104 ~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
+....-|+.+-.|-+|+|+-.-- ++++.+. .++-+++..++ ...|.+.||.+|+.||+..+
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaA---------knFFtKS------klpi~ELshIW----eLsD~d~DGALtL~EFcAAf 291 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAA---------KNFFTKS------KLPIEELSHIW----ELSDVDRDGALTLSEFCAAF 291 (737)
T ss_pred HHHHhhhhcccCCcccccccHHH---------Hhhhhhc------cCchHHHHHHH----hhcccCccccccHHHHHhhH
Confidence 44566789999999999999888 6655432 56666775555 89999999999999999988
Q ss_pred hh
Q 041619 184 AR 185 (222)
Q Consensus 184 ~~ 185 (222)
+.
T Consensus 292 HL 293 (737)
T KOG1955|consen 292 HL 293 (737)
T ss_pred hh
Confidence 64
No 125
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=87.57 E-value=8.5 Score=29.71 Aligned_cols=57 Identities=14% Similarity=0.240 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC------CcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA------PHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~------~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
.+.+|..++..+.+.+++.|...++....... ...-++...|.+. .+.+|.+.++++
T Consensus 98 Fe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~i 160 (174)
T PF05042_consen 98 FEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDI 160 (174)
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHH
Confidence 35666666665555666666666665432111 1223344444444 455666766666
No 126
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=87.37 E-value=20 Score=33.99 Aligned_cols=167 Identities=10% Similarity=0.113 Sum_probs=102.1
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh--------cc------CcchHHHHHHHHHHhcCC
Q 041619 15 HAALAAQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK--------NH------KKQSLIADRVFQLFDLKR 80 (222)
Q Consensus 15 ~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~--------~~------~~~~~~~~~lf~~~d~~~ 80 (222)
+..+++...+..=.+.-+..+|+.++... ++..++..+...+|.. .| ...+.-+.-++..||...
T Consensus 405 lr~LQK~l~ldlv~ltl~l~if~~h~l~~-~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R 483 (966)
T KOG4286|consen 405 LRRLQKALCLDLLSLSLALDALDQHNLKQ-NDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGR 483 (966)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHhcccc-cCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCC
Confidence 44455555555555666666777765531 3456666665544411 11 112233467889999999
Q ss_pred CCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHH---HHHhhcCCCCCHHHHHH
Q 041619 81 DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMIL---ALLKESDLILSDDIIEA 157 (222)
Q Consensus 81 ~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~---~~~~~~g~~~~~~~i~~ 157 (222)
+|.|.--+|...+..++ ....+++++.+|......+.--+ ...|--++-.+ .++.. ......|.++.+. +
T Consensus 484 ~g~irvls~ki~~i~lc-k~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dl--iqipr~lGE~aAfGgsNveps-v-- 556 (966)
T KOG4286|consen 484 TGRIRVLSFKIGIISLC-KAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDL--IQIPRQLGEVAAFGGSNIEPS-V-- 556 (966)
T ss_pred CcceEEeeehhhHHHHh-cchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHH--HHHHHHHhHHHhhcCCCCChH-H--
Confidence 99999999999999999 67788899999999976655443 55552122111 11111 1111123445443 3
Q ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhc
Q 041619 158 IINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNM 193 (222)
Q Consensus 158 ~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~ 193 (222)
+.-|. ..++...|+...|..|+...|-.+-++
T Consensus 557 --rsCF~--~v~~~pei~~~~f~dw~~~epqsmVwL 588 (966)
T KOG4286|consen 557 --RSCFQ--FVNNKPEIEAALFLDWMRLEPQSMVWL 588 (966)
T ss_pred --HHHHH--hcCCCCcchHHHHHHHhccCcchhhHH
Confidence 33334 346667899999999999888766543
No 127
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=86.92 E-value=1.7 Score=39.99 Aligned_cols=78 Identities=21% Similarity=0.239 Sum_probs=51.2
Q ss_pred ccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 041619 84 IEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAF 163 (222)
Q Consensus 84 i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f 163 (222)
++|..|...+....+......-++.+|+.+|.+++|.|+..++ ..-+..+.. .++-+-+.-+|
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~l---------v~gL~~l~~--------~~~~ek~~l~y 597 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDL---------VSGLSILKA--------GDALEKLKLLY 597 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHH---------HHHHHHHHh--------hhHHHHHHHHH
Confidence 4555555555555544445566888999999999999999999 444433211 11222235667
Q ss_pred HHhCCCCCCccCHHHH
Q 041619 164 EDADFKGDGKIDPEEW 179 (222)
Q Consensus 164 ~~~d~~~dg~Is~eeF 179 (222)
..+|++++ ....++-
T Consensus 598 ~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 598 KLHDPPAD-ELDREEV 612 (671)
T ss_pred hhccCCcc-ccccccc
Confidence 88898888 7766664
No 128
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=86.86 E-value=3.4 Score=31.83 Aligned_cols=138 Identities=14% Similarity=0.046 Sum_probs=70.4
Q ss_pred HHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcc--hHHHHHHHHHHhcC--CCCccc---HHHHHHHHHhhC-------
Q 041619 32 LYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQ--SLIADRVFQLFDLK--RDGGIE---FEEFVRSLSIFH------- 97 (222)
Q Consensus 32 l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~--~~~~~~lf~~~d~~--~~g~i~---f~eF~~~~~~~~------- 97 (222)
|.+-..-.|.+ +||.|.+-|-...+..+|... +..+--+....=.- ..+.+. |.=++.-+.+-.
T Consensus 9 LQqHvaFFDrd--~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 9 LQQHVAFFDRD--KDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred HhhhhceeCCC--CCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence 33334445777 999999999999998887542 11111111111000 011110 111111111110
Q ss_pred ---CCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH-HHHHhCCCCCCc
Q 041619 98 ---PEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINK-AFEDADFKGDGK 173 (222)
Q Consensus 98 ---~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~-~f~~~d~~~dg~ 173 (222)
...-..++.+.+|..+++.+.+.+|..|+ .+|+..-. .. .-.--.+...++. +.-.+-.+.+|.
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~---------~~m~~~nr-~~--~D~~GW~a~~~EW~~~y~L~~d~dG~ 154 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLREL---------WRMLKGNR-NA--NDPFGWFAAFFEWGALYILAKDKDGF 154 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHH---------HHHHHhcc-cc--CCcchhhhhhhHHHHHHHHHcCcCCc
Confidence 01134678999999999999999999999 66554311 00 0000111111111 001334567888
Q ss_pred cCHHHHHHHH
Q 041619 174 IDPEEWKEFV 183 (222)
Q Consensus 174 Is~eeF~~~~ 183 (222)
+..|+-+.++
T Consensus 155 l~Ke~iR~vY 164 (174)
T PF05042_consen 155 LSKEDIRGVY 164 (174)
T ss_pred EeHHHHhhhc
Confidence 9888876654
No 129
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=86.58 E-value=0.5 Score=39.97 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=48.2
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
+.-.|..+|.|.++.++-.|+..+-..+........-.+.+|+..|.|+|..|+.+|+
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew 392 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEW 392 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHH
Confidence 4557888999999999888887776666555566777889999999999999999999
No 130
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=86.08 E-value=16 Score=35.40 Aligned_cols=125 Identities=10% Similarity=0.210 Sum_probs=80.9
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHHHh--cCCC-----CcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCC
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQLFD--LKRD-----GGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQ 117 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d--~~~~-----g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 117 (222)
..|+|....+.+.+-... .+.-++.....+- .+.+ ...+++.|..++..+| +..++..+|..+..++
T Consensus 161 ~~grip~knI~k~F~~~k--~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klc----pR~eie~iF~ki~~~~ 234 (1189)
T KOG1265|consen 161 FEGRIPVKNIIKTFSADK--KEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLC----PRPEIEEIFRKISGKK 234 (1189)
T ss_pred ccccccHHHHHHHhhcCC--chhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcC----CchhHHHHHHHhccCC
Confidence 677787777776663321 1122222222211 1111 2356777788777777 3457899999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHhh------cCCCCCHHHHHHHHHHHHHHhCCCC----CCccCHHHHHHHHhhCh
Q 041619 118 TGFIEREEVKGVILTLLVKEMILALLKE------SDLILSDDIIEAIINKAFEDADFKG----DGKIDPEEWKEFVARNP 187 (222)
Q Consensus 118 ~G~I~~~el~~~~~~~~~~~~l~~~~~~------~g~~~~~~~i~~~~~~~f~~~d~~~----dg~Is~eeF~~~~~~~~ 187 (222)
.-++|.++| ..++..-..+ +-+...+..+..++ ..+.+|. .|.++-+.|++++....
T Consensus 235 kpylT~~ql---------~dfln~~QrDpRLNeilfp~~~~~r~~~li----ekyEp~~~~a~~gqms~dgf~ryl~gdE 301 (1189)
T KOG1265|consen 235 KPYLTKEQL---------VDFLNKKQRDPRLNEILFPPADPRRIQSLI----EKYEPNSDNAEKGQMSTDGFVRYLMGDE 301 (1189)
T ss_pred CccccHHHH---------HHHHhhhccCcchhhhhcCCCCHHHHHHHH----HHcCCchhhhhccccchhhhHHHhhCCc
Confidence 899999999 6665432221 13456678887777 5666555 48999999999998844
Q ss_pred h
Q 041619 188 S 188 (222)
Q Consensus 188 ~ 188 (222)
+
T Consensus 302 n 302 (1189)
T KOG1265|consen 302 N 302 (1189)
T ss_pred c
Confidence 4
No 131
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=84.53 E-value=0.47 Score=30.89 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=21.9
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
...+.+..+|+.+ .++.++||.+||
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dL 27 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDL 27 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHH
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHH
Confidence 3457889999999 788899999999
No 132
>PLN02952 phosphoinositide phospholipase C
Probab=78.07 E-value=24 Score=32.89 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=55.8
Q ss_pred CCCcccHHHHHHHHhhcc---CcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-CcHHHHHHHhhhhc------
Q 041619 45 DDGIISKEEFQLGLFKNH---KKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA-PHAEKVSFAFQLFD------ 114 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~---~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~-~~~~~~~~~F~~~D------ 114 (222)
+.|.+++.+|..+...+. ..+..++..+|..+..++ +.++.++|..++....... ...+.+..++..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 568999999986654443 225778899999997544 6799999999999877433 33455555554331
Q ss_pred -CCCCCcccHHHH
Q 041619 115 -VSQTGFIEREEV 126 (222)
Q Consensus 115 -~d~~G~I~~~el 126 (222)
..+.+.++.+.|
T Consensus 92 ~~~~~~~l~~~~F 104 (599)
T PLN02952 92 TRYTRHGLNLDDF 104 (599)
T ss_pred ccccccCcCHHHH
Confidence 123356899998
No 133
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=74.09 E-value=5.8 Score=36.43 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=61.0
Q ss_pred hCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcc---hHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 21 QTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQ---SLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 21 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~---~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
.+.++..-++-+...|.++|.+ +||.++..++..++...+..+ ..+.+. .-.+..|.+++.-|++.|+...
T Consensus 306 s~ELs~~~~~Fl~~~f~~~D~d--~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~----t~~~~~G~ltl~g~l~~WsL~T 379 (625)
T KOG1707|consen 306 SVELSPKGYRFLVDVFEKFDRD--NDGALSPEELKDLFSTAPGSPWTSSPYKDS----TVKNERGWLTLNGFLSQWSLMT 379 (625)
T ss_pred ceeccHHHHHHHHHHHHhccCC--CCCCcCHHHHHHHhhhCCCCCCCCCccccc----ceecccceeehhhHHHHHHHHh
Confidence 4467888999999999999999 999999999998886654332 011111 1122578999999999988654
Q ss_pred CCCCcHHHHHHHhhhhcCCC
Q 041619 98 PEAPHAEKVSFAFQLFDVSQ 117 (222)
Q Consensus 98 ~~~~~~~~~~~~F~~~D~d~ 117 (222)
--.....--..+|.-|..++
T Consensus 380 lld~~~t~~~L~Ylgf~~~~ 399 (625)
T KOG1707|consen 380 LLDPRRTLEYLAYLGFPTDA 399 (625)
T ss_pred hccHHHHHHHHHhcCCcccc
Confidence 21122222334555565554
No 134
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=73.84 E-value=10 Score=36.68 Aligned_cols=73 Identities=12% Similarity=0.065 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHhCCCCCCccCHHHHHH
Q 041619 103 AEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSD-DIIEAIINKAFEDADFKGDGKIDPEEWKE 181 (222)
Q Consensus 103 ~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~-~~i~~~~~~~f~~~d~~~dg~Is~eeF~~ 181 (222)
..+++..|..+|+...|..+.+++ ...+..+ |....+ +++..-+..+....|.+.-|++++.+|..
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~---------~~~Lmsl----g~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~d 812 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEEL---------LRCLMSL----GYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFED 812 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHH---------HHHHHhc----CcccchhHHHHHHHHHHHhccCcccccceeHHHHHh
Confidence 456888999999999999999999 6655544 766553 44443334455777888889999999999
Q ss_pred HHhhChh
Q 041619 182 FVARNPS 188 (222)
Q Consensus 182 ~~~~~~~ 188 (222)
.+.+-..
T Consensus 813 dl~R~~e 819 (890)
T KOG0035|consen 813 DLEREYE 819 (890)
T ss_pred Hhhhhhh
Confidence 8877544
No 135
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=72.80 E-value=6 Score=40.09 Aligned_cols=69 Identities=19% Similarity=0.315 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHH------------HhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHH
Q 041619 24 FKETEIEILYLLF------------KKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVR 91 (222)
Q Consensus 24 ~~~~ei~~l~~~F------------~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~ 91 (222)
-+.+.|..++++| +.+|++ +.|.|+..+|.+++..-..-.+.+++-++.-...+.+...+|++|+.
T Consensus 4039 ~nvemilkffdmflklkdltssdtfkeydpd--gkgiiskkdf~kame~~k~ytqse~dfllscae~dend~~~y~dfv~ 4116 (5019)
T KOG2243|consen 4039 NNVEMILKFFDMFLKLKDLTSSDTFKEYDPD--GKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEADENDMFDYEDFVD 4116 (5019)
T ss_pred ccHHHHHHHHHHHHHHhhccccccchhcCCC--CCccccHHHHHHHHhccccchhHHHHHHHHhhccCccccccHHHHHH
Confidence 3455566666554 557888 99999999999998555433556667777777778888899999998
Q ss_pred HHH
Q 041619 92 SLS 94 (222)
Q Consensus 92 ~~~ 94 (222)
-+.
T Consensus 4117 rfh 4119 (5019)
T KOG2243|consen 4117 RFH 4119 (5019)
T ss_pred Hhc
Confidence 664
No 136
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=71.42 E-value=11 Score=28.11 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=38.1
Q ss_pred CCcccHHHHHHHHhhccCcchHHHHHHHHHHhc-------CCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCC
Q 041619 46 DGIISKEEFQLGLFKNHKKQSLIADRVFQLFDL-------KRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQ 117 (222)
Q Consensus 46 ~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~-------~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 117 (222)
=+.|++.+|...-.-... ....++.++..+.. +..+.|+|+.|..++..+.....+.+-.+.+|..|-...
T Consensus 5 ~~~lsp~eF~qLq~y~ey-s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSEY-STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp -S-S-HHHHHHHHHHHHH-----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred eeccCHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 356777777644311111 22234555555533 235689999999999998866678888899999996554
No 137
>PLN02228 Phosphoinositide phospholipase C
Probab=69.28 E-value=24 Score=32.65 Aligned_cols=70 Identities=9% Similarity=0.185 Sum_probs=47.7
Q ss_pred CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCCC----CCCc
Q 041619 99 EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDL-ILSDDIIEAIINKAFEDADFK----GDGK 173 (222)
Q Consensus 99 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~-~~~~~~i~~~~~~~f~~~d~~----~dg~ 173 (222)
...+..++..+|..+-. ++.++.++| ..+|.... +. ..+.+.++.++ ..+... ..|.
T Consensus 19 ~~~~~~ei~~if~~~s~--~~~~t~~~~---------~~FL~~~Q---~~~~~~~~~~~~i~----~~~~~~~~~~~~~~ 80 (567)
T PLN02228 19 TREPPVSIKRLFEAYSR--NGKMSFDEL---------LRFVSEVQ---GERHAGLDYVQDIF----HSVKHHNVFHHHGL 80 (567)
T ss_pred CCCCcHHHHHHHHHhcC--CCccCHHHH---------HHHHHHhc---CCccCCHHHHHHHH----HHhccchhhcccCc
Confidence 34577889999999964 368999999 77765543 32 23455565555 444322 3467
Q ss_pred cCHHHHHHHHhhC
Q 041619 174 IDPEEWKEFVARN 186 (222)
Q Consensus 174 Is~eeF~~~~~~~ 186 (222)
++.+.|..++...
T Consensus 81 ~~~~gF~~yl~s~ 93 (567)
T PLN02228 81 VHLNAFYRYLFSD 93 (567)
T ss_pred cCHHHHHHHhcCc
Confidence 9999999999764
No 138
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=68.51 E-value=37 Score=29.25 Aligned_cols=121 Identities=12% Similarity=0.183 Sum_probs=72.8
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHh--hcC
Q 041619 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLK--ESD 147 (222)
Q Consensus 70 ~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~--~~g 147 (222)
.-++.++|..+.|+++--....+++..+ .+...++++.+|.++. |.+|.+..-.+..++ ++++. +.. ..|
T Consensus 113 aflLaA~ds~~~g~~~vfavkialatlc-~gk~~dklryIfs~is-ds~gim~~i~~~~fl-----~evls-lpT~v~e~ 184 (434)
T KOG4301|consen 113 AFLLAAEDSEGQGKQQVFAVKIALATLC-GGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFL-----HEVLS-LPTAVFEG 184 (434)
T ss_pred HHHHhhcCccCCCCceeecchhhhhhhc-cchHHHHHHHHHHHHc-cchHHHHHHHHHHHH-----HHHHc-CCchhhcC
Confidence 4566678988999988877777888888 6778899999999995 567766666662223 22221 000 013
Q ss_pred CCC--CHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChh--hhhhcCccc-chhhhccCCC
Q 041619 148 LIL--SDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPS--LLKNMTIPY-LKDITTAFPS 207 (222)
Q Consensus 148 ~~~--~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 207 (222)
+.. ++.-++..+ -.+.+++.+.|+..+...|. .+.++++.. +..+...|++
T Consensus 185 psfg~te~~a~~cf---------~qqrKv~Ln~fldtl~sdp~p~cl~wlpLmhrla~v~nv~hp 240 (434)
T KOG4301|consen 185 PSFGYTELSARLCF---------LQQRKVELNQFLDTLMSDPPPQCLVWLPLMHRLATVENVFHP 240 (434)
T ss_pred CCcchHHHHHHHHH---------HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhcccCCC
Confidence 332 222222222 34557899999998887765 344444333 3444444443
No 139
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=68.43 E-value=11 Score=34.62 Aligned_cols=64 Identities=13% Similarity=0.286 Sum_probs=50.7
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Q 041619 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~ 184 (222)
..+.-|..+|.|+.|+++.+++ ..+|... +...++..+.+.+ .+.|.+-.|.+...||.+++.
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v---------~~vlk~~----~~~~d~~~~~~~l----~ea~~~~~g~v~l~e~~q~~s 656 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADV---------LKVLKSE----NVGWDEDRLHEEL----QEADENLNGFVELREFLQLMS 656 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHH---------HHHHHHh----cCCCCHHHHHHHH----HHHHHhhcceeeHHHHHHHHH
Confidence 3456789999999999999999 6655443 6678887777666 788888899999999988775
Q ss_pred h
Q 041619 185 R 185 (222)
Q Consensus 185 ~ 185 (222)
.
T Consensus 657 ~ 657 (680)
T KOG0042|consen 657 A 657 (680)
T ss_pred H
Confidence 3
No 140
>PF02337 Gag_p10: Retroviral GAG p10 protein; InterPro: IPR003322 Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different. This entry represents matrix proteins from beta-retroviruses such as Mason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus) and Mouse mammary tumor virus (MMTV) [, ]. This entry also identifies matrix proteins from several eukaryotic endogenous retroviruses, which arise when one or more copies of the retroviral genome becomes integrated into the host genome [].; GO: 0005198 structural molecule activity, 0019028 viral capsid; PDB: 2F77_X 2F76_X.
Probab=67.95 E-value=35 Score=23.41 Aligned_cols=54 Identities=13% Similarity=0.209 Sum_probs=31.7
Q ss_pred CCccccc-cccCchhHHHHHhhC--CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHH
Q 041619 1 MGCVCMK-QRLKSVNHAALAAQT--HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQL 56 (222)
Q Consensus 1 Mg~~~s~-~~~~~~~~~~~~~~~--~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~ 56 (222)
||+.+|+ +-. ..++.+-+.. .++.+++..+....+..++=...+|.|+.+.+.+
T Consensus 1 MG~~~S~~~fv--~~Lk~lLk~rGi~v~~~~L~~f~~~i~~~~PWF~~eG~l~~~~W~k 57 (90)
T PF02337_consen 1 MGQSHSKQPFV--SILKHLLKERGIRVKKKDLINFLSFIDKVCPWFPEEGTLDLDNWKK 57 (90)
T ss_dssp --SSS-HHHHH--HHHHHHHHCCT----HHHHHHHHHHHHHHTT-SS--SS-HHHHHHH
T ss_pred CCccchhhHHH--HHHHHHHHHcCeeecHHHHHHHHHHHHHhCCCCCCCCCcCHHHHHH
Confidence 9999998 222 4466666655 4677788888888888876333678899888874
No 141
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=66.23 E-value=27 Score=26.39 Aligned_cols=63 Identities=21% Similarity=0.232 Sum_probs=38.8
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhh
Q 041619 109 AFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVAR 185 (222)
Q Consensus 109 ~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~ 185 (222)
.|..|-......++-..| ..++..+ .-++..++..+++ -+|..+-..+...|+|++|+.++..
T Consensus 7 ~f~~fG~~~~~~m~~~~F---------~Kl~kD~-~i~d~k~t~tdvD----iiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNF---------AKLCKDC-GIIDKKLTSTDVD----IIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHCSSTSTSSEEEHHHH---------HHHHHHT-SS--SSS-HHHHH----HHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHH---------HHHHHHc-CCCCCCCchHHHH----HHHHHhhcCCCcccCHHHHHHHHHH
Confidence 333334556678899999 6655543 1224457777774 4457766666677999999998854
No 142
>PLN02223 phosphoinositide phospholipase C
Probab=65.76 E-value=44 Score=30.68 Aligned_cols=77 Identities=16% Similarity=-0.007 Sum_probs=55.0
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHhC----CCCCCcc
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESD-LILSDDIIEAIINKAFEDAD----FKGDGKI 174 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g-~~~~~~~i~~~~~~~f~~~d----~~~dg~I 174 (222)
..+.+.++.+|..|- +++|.++.+.+ ..++.-+.+..| ...+.++.+.+++.++.... ....+.+
T Consensus 12 ~~~p~~v~~~f~~~~-~~~~~m~~~~l---------~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l 81 (537)
T PLN02223 12 ANQPDLILNFFGNEF-HGYDDDMPELL---------PRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCL 81 (537)
T ss_pred CCCcHHHHHHHHHhh-cCCCCCCHHHH---------HHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhcccc
Confidence 456788999999994 78899999999 766643333334 34667788888877665432 1223569
Q ss_pred CHHHHHHHHhhC
Q 041619 175 DPEEWKEFVARN 186 (222)
Q Consensus 175 s~eeF~~~~~~~ 186 (222)
+.+.|.+++...
T Consensus 82 ~~~~f~~~L~s~ 93 (537)
T PLN02223 82 ELDHLNEFLFST 93 (537)
T ss_pred CHHHHHHHhcCc
Confidence 999999999764
No 143
>PLN02230 phosphoinositide phospholipase C 4
Probab=64.64 E-value=42 Score=31.32 Aligned_cols=76 Identities=8% Similarity=0.112 Sum_probs=50.4
Q ss_pred CCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhC---CCCCCccCH
Q 041619 100 APHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDAD---FKGDGKIDP 176 (222)
Q Consensus 100 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d---~~~dg~Is~ 176 (222)
..+..++..+|..|-.++ +.++.++| ..+|...... ....+.+.++.+++.+..... .-+.+.++.
T Consensus 25 ~~p~~ei~~lf~~~s~~~-~~mt~~~l---------~~FL~~~Q~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 93 (598)
T PLN02230 25 SGPVADVRDLFEKYADGD-AHMSPEQL---------QKLMAEEGGG-EGETSLEEAERIVDEVLRRKHHIAKFTRRNLTL 93 (598)
T ss_pred CCCcHHHHHHHHHHhCCC-CccCHHHH---------HHHHHHhCCC-cccCCHHHHHHHHHHHHhhccccccccccccCH
Confidence 346688999999995444 89999999 7776543211 113456667777755443322 123456999
Q ss_pred HHHHHHHhhC
Q 041619 177 EEWKEFVARN 186 (222)
Q Consensus 177 eeF~~~~~~~ 186 (222)
+.|..++...
T Consensus 94 ~~F~~yL~s~ 103 (598)
T PLN02230 94 DDFNYYLFST 103 (598)
T ss_pred HHHHHHHcCc
Confidence 9999999764
No 144
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=61.60 E-value=53 Score=22.95 Aligned_cols=63 Identities=21% Similarity=0.327 Sum_probs=31.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 104 EKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 104 ~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
..++.=|..+-. +|.+.+..| ...+ |-.-+.+-..++++++=+.-... ...|+.+|+..+.
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~F---------g~CI-------GM~dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW 90 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDF---------GECI-------GMKDSKEFAGELFDALARRRGIK-GDSITKDELKEFW 90 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGH---------HHHH-------T--S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHH---------HHhc-------CCcccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHH
Confidence 344555666654 677777777 4422 43444555555555444444444 3457777777666
Q ss_pred hh
Q 041619 184 AR 185 (222)
Q Consensus 184 ~~ 185 (222)
.+
T Consensus 91 ~q 92 (100)
T PF08414_consen 91 EQ 92 (100)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 145
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=60.59 E-value=71 Score=24.09 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhc
Q 041619 149 ILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNM 193 (222)
Q Consensus 149 ~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~ 193 (222)
.++..++..++..+.+.+-.++ ++=|++...+.+.|.++.++
T Consensus 127 ~MSk~Qik~L~~~Ii~~akae~---~dtE~Ye~vwkKmPaY~~ni 168 (175)
T PF04876_consen 127 RMSKDQIKTLCEQIIEMAKAES---SDTEHYEKVWKKMPAYFSNI 168 (175)
T ss_pred hhhHHHHHHHHHHHHHHHhccC---CchHHHHHHHHHhhHHHHHH
Confidence 3444445544444444443332 34466777777777766554
No 146
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=59.61 E-value=25 Score=23.05 Aligned_cols=13 Identities=23% Similarity=0.516 Sum_probs=7.4
Q ss_pred CCCcccHHHHHHH
Q 041619 117 QTGFIEREEVKGV 129 (222)
Q Consensus 117 ~~G~I~~~el~~~ 129 (222)
..|+++.+||..+
T Consensus 27 ~~Gkv~~ee~n~~ 39 (75)
T TIGR02675 27 ASGKLRGEEINSL 39 (75)
T ss_pred HcCcccHHHHHHH
Confidence 3566666666333
No 147
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=56.44 E-value=58 Score=21.78 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=36.3
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCC
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDG 82 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g 82 (222)
+...|+.+++..++++|..+=. .+ .+.++-...+... ....+.+..+...+....-|
T Consensus 24 rR~Gfs~~~i~~l~~ayr~l~~----~~-~~~~~a~~~l~~~-~~~~~~v~~~~~Fi~~S~RG 80 (83)
T PF13720_consen 24 RRRGFSKEEISALRRAYRILFR----SG-LTLEEALEELEEE-YPDSPEVREIVDFIRNSKRG 80 (83)
T ss_dssp HHTTS-HHHHHHHHHHHHHHHT----SS-S-HHHHHHHHHHH-TTSCHHHHHHHHHHHHTSS-
T ss_pred HHcCCCHHHHHHHHHHHHHHHh----CC-CCHHHHHHHHHHh-ccCCHHHHHHHHHHHhCCCC
Confidence 4668999999999999998853 22 5666655555442 13466677777777655444
No 148
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=55.75 E-value=1e+02 Score=27.95 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=63.0
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhh---hcC-----CCCCcccHHHHHHHHHHHHHHHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQL---FDV-----SQTGFIEREEVKGVILTLLVKEMIL 140 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~---~D~-----d~~G~I~~~el~~~~~~~~~~~~l~ 140 (222)
.+-||..+....++.+.+-.|..++...- -...+.+++.++.. +|+ ...+.++++.||+.|... ..++.
T Consensus 88 eDLLFyLiaegq~ekipihKFiTALkstG-LrtsDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~sS--I~lvS 164 (622)
T KOG0506|consen 88 EDLLFYLIAEGQSEKIPIHKFITALKSTG-LRTSDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIFSS--IVLVS 164 (622)
T ss_pred hhhhhHHhhcCCcCcccHHHHHHHHHHcC-CCcCCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhccc--hhHHH
Confidence 46788888776678999999999998765 34555566665543 343 224689999997777554 22333
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCcc
Q 041619 141 ALLKESDLILSDDIIEAIINKAFEDADFKGDGKI 174 (222)
Q Consensus 141 ~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~I 174 (222)
..++..-...+=.+.-..++.+|+..-.-..|.|
T Consensus 165 qALrkqmVIPdw~~Fts~I~tIFEscke~seG~v 198 (622)
T KOG0506|consen 165 QALRKQMVIPDWEEFTSHIDTIFESCKESSEGKV 198 (622)
T ss_pred HHHhcCccCCcHHHHHHHHHHHHHHHHhcCCccH
Confidence 3333221222223444455677777766666653
No 149
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.52 E-value=71 Score=23.89 Aligned_cols=84 Identities=18% Similarity=0.229 Sum_probs=53.2
Q ss_pred HHHHhhcCCCCCCCcccHHHHHH---HHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHH--
Q 041619 34 LLFKKLSSSLVDDGIISKEEFQL---GLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSF-- 108 (222)
Q Consensus 34 ~~F~~~d~~~~~~G~i~~~ef~~---~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~-- 108 (222)
-.|+-.. .||.++..|... ++...-..+...+..+......-+...+++..|-+.+..-. +.+.++..
T Consensus 34 Llf~Vm~----ADG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~L---d~e~R~eli~ 106 (148)
T COG4103 34 LLFHVME----ADGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHL---DEEQRLELIG 106 (148)
T ss_pred HHHHHHh----cccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 4565555 678898888653 33333233555667777776666677899999999887655 34444333
Q ss_pred -HhhhhcCCCCCcccHHHH
Q 041619 109 -AFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 109 -~F~~~D~d~~G~I~~~el 126 (222)
++.+- ..||.++.-|-
T Consensus 107 ~mweIa--~ADg~l~e~Ed 123 (148)
T COG4103 107 LMWEIA--YADGELDESED 123 (148)
T ss_pred HHHHHH--HccccccHHHH
Confidence 34433 45677777776
No 150
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=54.09 E-value=16 Score=17.84 Aligned_cols=15 Identities=33% Similarity=0.632 Sum_probs=12.0
Q ss_pred CCCCCCccCHHHHHH
Q 041619 167 DFKGDGKIDPEEWKE 181 (222)
Q Consensus 167 d~~~dg~Is~eeF~~ 181 (222)
|.|+||.|+--++..
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 679999999888864
No 151
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=52.08 E-value=63 Score=20.95 Aligned_cols=46 Identities=17% Similarity=0.175 Sum_probs=33.3
Q ss_pred CCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 041619 81 DGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVI 130 (222)
Q Consensus 81 ~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~ 130 (222)
+-.|+|...+.++.... +...+..+...|+.=..+.|+++||-+.+
T Consensus 6 sp~~~F~~L~~~l~~~l----~~~~~~~l~~~Y~~~k~~kIsR~~fvr~l 51 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHL----PPSKMDLLQKHYEEFKKKKISREEFVRKL 51 (70)
T ss_pred CCcccHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 45688888888887554 45566667777777788999999993333
No 152
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.53 E-value=9.4 Score=37.08 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFH 97 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~ 97 (222)
..+......+.++|.+.|.+ ++|.|+..+....+...|. ....++.++...|..+.|.+++.+|...+....
T Consensus 276 ~vsp~d~~~~~~if~q~d~~--~dG~I~s~~~~~~f~~~gl-~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKD--NDGSISSNEARNIFLPFGL-SKPRLAHVWLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred ccChHHHHHHHHHHHhcccc--CCCcccccccccccccCCC-ChhhhhhhhhhcchhccCcccccccchhhhhhh
Confidence 57888899999999999999 9999999999988866543 445568889999999999999999988776443
No 153
>PLN02222 phosphoinositide phospholipase C 2
Probab=51.12 E-value=66 Score=29.93 Aligned_cols=69 Identities=9% Similarity=0.257 Sum_probs=48.2
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCCCCCCccCHHHH
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDL-ILSDDIIEAIINKAFEDADFKGDGKIDPEEW 179 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~-~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF 179 (222)
....++..+|..|-. ++.++.++| ..+|.... +. ..+.+.+..+++.. .. .-..+.++++.|
T Consensus 22 ~~~~ei~~if~~~~~--~~~mt~~~l---------~~FL~~~Q---~~~~~~~~~~~~ii~~~-~~--~~~~~~~~~~gF 84 (581)
T PLN02222 22 EAPREIKTIFEKYSE--NGVMTVDHL---------HRFLIDVQ---KQDKATREDAQSIINSA-SS--LLHRNGLHLDAF 84 (581)
T ss_pred CCcHHHHHHHHHhcC--CCCcCHHHH---------HHHHHHhc---CCccCCHHHHHHHHHhh-hh--hhhccCcCHHHH
Confidence 355689999999963 579999999 77775543 32 35667777777542 11 123567999999
Q ss_pred HHHHhhC
Q 041619 180 KEFVARN 186 (222)
Q Consensus 180 ~~~~~~~ 186 (222)
..++...
T Consensus 85 ~~yL~s~ 91 (581)
T PLN02222 85 FKYLFGD 91 (581)
T ss_pred HHHhcCC
Confidence 9999764
No 154
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=49.85 E-value=81 Score=21.51 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=45.8
Q ss_pred CCCcccHHHHHHHH---hhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcc
Q 041619 45 DDGIISKEEFQLGL---FKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFI 121 (222)
Q Consensus 45 ~~G~i~~~ef~~~l---~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I 121 (222)
.||.++..|...+- ......+......+...+........++.+|...+...+.......-+..++++-- -||.+
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~--ADG~~ 89 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVAY--ADGEL 89 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--hcCCC
Confidence 46778887765332 22111234455666666666555567899998887765422222333445555543 45777
Q ss_pred cHHHH
Q 041619 122 EREEV 126 (222)
Q Consensus 122 ~~~el 126 (222)
+..|-
T Consensus 90 ~~~E~ 94 (104)
T cd07313 90 DEYEE 94 (104)
T ss_pred CHHHH
Confidence 77776
No 155
>PF09682 Holin_LLH: Phage holin protein (Holin_LLH); InterPro: IPR010026 This entry represents the Bacteriophage LL-H, Orf107, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=49.68 E-value=82 Score=22.14 Aligned_cols=51 Identities=20% Similarity=0.243 Sum_probs=37.0
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHh
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDA 166 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~ 166 (222)
..+-+.+...++|.--+++- .+.+...+...|..+++++++.+++.....+
T Consensus 54 ~aveq~~~~~~~G~~K~~~A---------~~~v~~~L~~~gi~~t~~~i~~~IEaAV~~m 104 (108)
T PF09682_consen 54 NAVEQVAKEGGKGEEKKAEA---------VQYVKERLKKKGIKVTDEQIEGAIEAAVKEM 104 (108)
T ss_pred HHHHHHHhccCCcHHHHHHH---------HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 44455555556787777777 6666666777799999999999997765544
No 156
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=48.35 E-value=16 Score=26.22 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Q 041619 149 ILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184 (222)
Q Consensus 149 ~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~ 184 (222)
.+++++.+.+. .++-.|..|+|.|-||+.-+.
T Consensus 3 iLtDeQFdrLW----~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLW----NEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHH----TTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhh----hhCcCCccCCEeHHHHHHHcc
Confidence 36778886666 899999999999999998764
No 157
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=43.98 E-value=10 Score=30.06 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=37.0
Q ss_pred HHhcC-CCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 75 LFDLK-RDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 75 ~~d~~-~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
.+|+. -+|.++-.|...+-+.+. +.+.-+...|...|.|++|+|+.+|+
T Consensus 195 qld~~p~d~~~sh~el~pl~ap~i---pme~c~~~f~e~cd~~nd~~ial~ew 244 (259)
T KOG4004|consen 195 QLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEW 244 (259)
T ss_pred cccCCCccccccccccccccCCcc---cHHhhchhhhhcccCCCCCceeHHHh
Confidence 34444 367787777766554443 56677888999999999999999999
No 158
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=41.92 E-value=70 Score=18.56 Aligned_cols=33 Identities=30% Similarity=0.310 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh
Q 041619 28 EIEILYLLFKKLSSSLVDDGIISKEEFQLGLFK 60 (222)
Q Consensus 28 ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~ 60 (222)
.+..+..+|+++...--....++..||...+..
T Consensus 4 ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 4 AIETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 355666667666531004578999999987744
No 159
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=41.60 E-value=78 Score=20.52 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhc
Q 041619 24 FKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKN 61 (222)
Q Consensus 24 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~ 61 (222)
++.+....+...|..+ ..+.|+.++|...+...
T Consensus 22 l~~~~~~~l~~~Y~~~-----k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 22 LPPSKMDLLQKHYEEF-----KKKKISREEFVRKLRQI 54 (70)
T ss_pred CCHHHHHHHHHHHHHH-----HHCCCCHHHHHHHHHHH
Confidence 7788888888888887 67889999988777544
No 160
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=41.11 E-value=55 Score=27.89 Aligned_cols=83 Identities=20% Similarity=0.302 Sum_probs=51.3
Q ss_pred HHhhcCCCCCCCcccHHHHHHHHhhcc------Ccch-----HH------HHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 041619 36 FKKLSSSLVDDGIISKEEFQLGLFKNH------KKQS-----LI------ADRVFQLFDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 36 F~~~d~~~~~~G~i~~~ef~~~l~~~~------~~~~-----~~------~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
|...|-+ ++|+++-.++...+.+.. ...+ .. .+.++..+|.|.+..|+.+||+..-....
T Consensus 250 F~LHD~N--sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ke- 326 (442)
T KOG3866|consen 250 FALHDLN--SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNKE- 326 (442)
T ss_pred eeeeccC--CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhcc-
Confidence 3344555 999999999987664311 1110 00 24567778999999999999998754332
Q ss_pred CCCcHHHHHHHhhhhcCCCCCcccHHHHH
Q 041619 99 EAPHAEKVSFAFQLFDVSQTGFIEREEVK 127 (222)
Q Consensus 99 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~ 127 (222)
..++.+.|+. .+....-|.+|++
T Consensus 327 f~~p~e~WEt------l~q~~~yTeEEL~ 349 (442)
T KOG3866|consen 327 FNPPKEEWET------LGQKKVYTEEELQ 349 (442)
T ss_pred cCCcchhhhh------hcccccccHHHHH
Confidence 2233344442 2344567788883
No 161
>PLN02228 Phosphoinositide phospholipase C
Probab=40.93 E-value=1.3e+02 Score=27.92 Aligned_cols=60 Identities=18% Similarity=0.347 Sum_probs=37.5
Q ss_pred chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-CcHHHHHHHhhhhcCC----CCCcccHHHH
Q 041619 65 QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA-PHAEKVSFAFQLFDVS----QTGFIEREEV 126 (222)
Q Consensus 65 ~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~-~~~~~~~~~F~~~D~d----~~G~I~~~el 126 (222)
+..++..+|..+..+ +.++.++|..++....... ...+.+..++..|... ..|.++.+.|
T Consensus 22 ~~~ei~~if~~~s~~--~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF 86 (567)
T PLN02228 22 PPVSIKRLFEAYSRN--GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAF 86 (567)
T ss_pred CcHHHHHHHHHhcCC--CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHH
Confidence 556677777776532 4677777777776665322 3345566667666432 2356888888
No 162
>PF11569 Homez: Homeodomain leucine-zipper encoding, Homez; PDB: 2YS9_A.
Probab=40.74 E-value=33 Score=21.30 Aligned_cols=23 Identities=4% Similarity=0.099 Sum_probs=17.7
Q ss_pred hhHHHHHhhCCCCHHHHHHHHHH
Q 041619 13 VNHAALAAQTHFKETEIEILYLL 35 (222)
Q Consensus 13 ~~~~~~~~~~~~~~~ei~~l~~~ 35 (222)
.++..|...++++.++++.++..
T Consensus 26 ~DL~~L~~kS~ms~qqVr~WFa~ 48 (56)
T PF11569_consen 26 EDLDELCDKSRMSYQQVRDWFAE 48 (56)
T ss_dssp THHHHHHHHTT--HHHHHHHHHH
T ss_pred hhHHHHHHHHCCCHHHHHHHHHH
Confidence 78899999999999988887753
No 163
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.69 E-value=22 Score=30.97 Aligned_cols=26 Identities=19% Similarity=0.379 Sum_probs=24.0
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
.+.+.++.+|+.+|..++|+|+-.-+
T Consensus 306 ~~s~q~rR~f~a~d~~d~nfis~s~~ 331 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPEDNNFISCSGL 331 (449)
T ss_pred CCCHHHHhhhhccCccCCCeeecHHH
Confidence 45788999999999999999999988
No 164
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=38.91 E-value=72 Score=22.56 Aligned_cols=65 Identities=14% Similarity=0.294 Sum_probs=40.0
Q ss_pred hhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHH------hhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Q 041619 111 QLFDVSQTGFIEREEVKGVILTLLVKEMILALL------KESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVA 184 (222)
Q Consensus 111 ~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~------~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~ 184 (222)
++||+..+-+||.+++ +.+...-- ...|..++..-+-.++ -+...++...++.+=..++++
T Consensus 10 RLYDT~tS~YITLedi---------~~lV~~g~~f~V~DakTgeDiT~~iL~QII----~E~E~~g~~~lp~~~L~qlIr 76 (107)
T TIGR01848 10 RLYDTETSSYVTLEDI---------RDLVREGREFQVVDSKSGDDLTRSILLQII----AEEESGGEPVLSTDFLTQIIR 76 (107)
T ss_pred cccCCCccceeeHHHH---------HHHHHCCCeEEEEECCCCchhHHHHHHHHH----HHHHhCCCCCCCHHHHHHHHH
Confidence 5789999999999999 66543210 1134555554443333 565566777777766666665
Q ss_pred hChh
Q 041619 185 RNPS 188 (222)
Q Consensus 185 ~~~~ 188 (222)
-.-+
T Consensus 77 ~yg~ 80 (107)
T TIGR01848 77 FYGG 80 (107)
T ss_pred HhCh
Confidence 4444
No 165
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=38.51 E-value=47 Score=23.18 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=20.7
Q ss_pred HHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 164 EDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 164 ~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
+..+.+....+|-+++..++..+|.+++
T Consensus 62 k~l~l~~~~~~s~~e~~~~l~~~p~Lik 89 (105)
T cd03035 62 RKLDDAQKAALDAAKAIALMLEHPSLIK 89 (105)
T ss_pred HhCChhhhccCCHHHHHHHHHhCcCeee
Confidence 4444332245889999999999999887
No 166
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=37.47 E-value=1.6e+02 Score=21.41 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=51.7
Q ss_pred ccHHHHHHHHHhh------CCCCCcHHHHHHHhhhhcCCC--CCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----
Q 041619 84 IEFEEFVRSLSIF------HPEAPHAEKVSFAFQLFDVSQ--TGFIEREEVKGVILTLLVKEMILALLKESDLILS---- 151 (222)
Q Consensus 84 i~f~eF~~~~~~~------~~~~~~~~~~~~~F~~~D~d~--~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~---- 151 (222)
|-|..|..++... +-+.-+...+..+|+....+. +..|+..|+..++..++ ..+-+..+....
T Consensus 15 IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy-----~~l~~~~p~~~~i~~~ 89 (127)
T PF09068_consen 15 IRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIY-----EFLNKRLPTLHQIPSR 89 (127)
T ss_dssp -SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHH-----HHHHHHSTTS--HH--
T ss_pred HHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHH-----HHHHHHCCCCCCCCch
Confidence 6666666664321 112233444556666665444 36799999966664443 222233332221
Q ss_pred --HHHHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Q 041619 152 --DDIIEAIINKAFEDADFKGDGKIDPEEWKEFV 183 (222)
Q Consensus 152 --~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~ 183 (222)
+.-++-++.++...+|+++.|.|+.-.|...+
T Consensus 90 ~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL 123 (127)
T PF09068_consen 90 PVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKVAL 123 (127)
T ss_dssp ---HHHHHHHHHHHHHH-TT--SEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCeeehhHHHHHH
Confidence 35577778889999999999999988887655
No 167
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=35.97 E-value=56 Score=29.08 Aligned_cols=53 Identities=21% Similarity=0.159 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 70 DRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 70 ~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
..|-+.+|.+.+|.|+.+|--.++..-++.....++-...|.- .|..|+.++|
T Consensus 71 r~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~~~~kr~~~fH~----dD~~ItVedL 123 (575)
T KOG4403|consen 71 RDIHRQMDDDHNGSIDVEESDEFLREDMKYRDSTRKRSEKFHG----DDKHITVEDL 123 (575)
T ss_pred HHHHHhcccccCCCcccccchHHHHHHhhcccchhhhhhhccC----CccceeHHHH
Confidence 4444555555666666666555555555444444444333432 2335666555
No 168
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=35.80 E-value=1.4e+02 Score=20.25 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=44.7
Q ss_pred CCCcccHHHHHHHHHhhCC-CCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q 041619 80 RDGGIEFEEFVRSLSIFHP-EAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAI 158 (222)
Q Consensus 80 ~~g~i~f~eF~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~ 158 (222)
.||.++-.|--.+-..+.. -+.+......+...+........+..++ ...+.. ..+++....+
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~-------~~~~~~r~~~ 75 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEF---------TSLIKE-------HFDYEERLEL 75 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHH---------HHHHHH-------hCCHHHHHHH
Confidence 3677888776655443222 1234455566666665555566777777 333221 2345555566
Q ss_pred HHHHHHHhCCCCCCccCHHH
Q 041619 159 INKAFEDADFKGDGKIDPEE 178 (222)
Q Consensus 159 ~~~~f~~~d~~~dg~Is~ee 178 (222)
+..++...-.| |.++..|
T Consensus 76 l~~L~~vA~AD--G~~~~~E 93 (104)
T cd07313 76 VEALWEVAYAD--GELDEYE 93 (104)
T ss_pred HHHHHHHHHhc--CCCCHHH
Confidence 66666666444 4566555
No 169
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=35.32 E-value=1.4e+02 Score=21.42 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=30.5
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~ 159 (222)
..+|.+.-..++..+|.+++ ..++.+. |..+.+..+..++
T Consensus 6 vaAYlL~~lgG~~~pTaddI---------~kIL~Aa----GveVd~~~~~l~~ 45 (112)
T PTZ00373 6 VAAYLMCVLGGNENPTKKEV---------KNVLSAV----NADVEDDVLDNFF 45 (112)
T ss_pred HHHHHHHHHcCCCCCCHHHH---------HHHHHHc----CCCccHHHHHHHH
Confidence 34666666778888999999 6665555 8888888887777
No 170
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=31.43 E-value=1.2e+02 Score=20.76 Aligned_cols=29 Identities=24% Similarity=0.477 Sum_probs=22.2
Q ss_pred HHHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 163 FEDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 163 f~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
+...+......++-+++.+++..+|.+++
T Consensus 63 ~~~l~~~~~~~ls~~e~~~~l~~~p~Lik 91 (105)
T cd02977 63 YRKLGLADKDELSDEEALELMAEHPKLIK 91 (105)
T ss_pred HHHcCCccccCCCHHHHHHHHHhCcCeee
Confidence 34554443456899999999999999876
No 171
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=30.50 E-value=2.2e+02 Score=23.32 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=35.6
Q ss_pred hhCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCC
Q 041619 20 AQTHFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDG 82 (222)
Q Consensus 20 ~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g 82 (222)
+...|+++++..+++.|+.+=. .| ++.++-.+.+... ....++++.+.+.+...+.|
T Consensus 196 ~r~g~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~s~rg 252 (255)
T PRK12461 196 RRRGFSSRAIRALKRAYKIIYR----SG-LSVQQAVAELELQ-QFESPEVEELIDFIKASKRG 252 (255)
T ss_pred hhcCCCHHHHHHHHHHHHHHHh----cC-CCHHHHHHHHHHh-ccCCHHHHHHHHHHHccCCC
Confidence 5667999999999999998742 23 4555544444332 23445567777776554444
No 172
>cd05833 Ribosomal_P2 Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2
Probab=30.24 E-value=1.8e+02 Score=20.61 Aligned_cols=54 Identities=17% Similarity=0.221 Sum_probs=36.7
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
..+|.+.-..++..+|.+++ ..++.+. |..+.+..+..++ +.+. ..+.++.+.-
T Consensus 4 vaAylL~~l~g~~~pTa~dI---------~~IL~Aa----GveVe~~~~~lf~----~~L~-----GKdi~eLIa~ 57 (109)
T cd05833 4 VAAYLLAVLGGNASPSAADV---------KKILGSV----GVEVDDEKLNKVI----SELE-----GKDVEELIAA 57 (109)
T ss_pred HHHHHHHHHcCCCCCCHHHH---------HHHHHHc----CCCccHHHHHHHH----HHHc-----CCCHHHHHHH
Confidence 34566666778889999999 6655555 8888888887776 4442 1455666553
No 173
>PF06919 Phage_T4_Gp30_7: Phage Gp30.7 protein; InterPro: IPR009690 This family consists of several phage Gp30.7 proteins of 121 residues in length. Family members seem to be exclusively from the T4-like viruses. The function of this family is unknown.
Probab=30.05 E-value=1.5e+02 Score=20.91 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=16.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhC
Q 041619 147 DLILSDDIIEAIINKAFEDAD 167 (222)
Q Consensus 147 g~~~~~~~i~~~~~~~f~~~d 167 (222)
|..-++++.+++.+-+..++|
T Consensus 100 ~~~a~~e~~EAi~D~V~NEf~ 120 (121)
T PF06919_consen 100 GNKAKPEHLEAIFDVVLNEFD 120 (121)
T ss_pred hccCCHHHHHHHHHHHHhhcc
Confidence 777889999888877776665
No 174
>PF02864 STAT_bind: STAT protein, DNA binding domain; InterPro: IPR013801 The STAT protein (Signal Transducers and Activators of Transcription) family contains transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors, hence they act as signal transducers in the cytoplasm and transcription activators in the nucleus []. Binding of these factors to cell-surface receptors leads to receptor autophosphorylation at a tyrosine, the phosphotyrosine being recognised by the STAT SH2 domain, which mediates the recruitment of STAT proteins from the cytosol and their association with the activated receptor. The STAT proteins are then activated by phosphorylation via members of the JAK family of protein kinases, causing them to dimerise and translocated to the nucleus, where they bind to specific promoter sequences in target genes. In mammals, STATs comprise a family of seven structurally and functionally related proteins: Stat1, Stat2, Stat3, Stat4, Stat5a and Stat5b, Stat6. STAT proteins play a critical role in regulating innate and acquired host immune responses. Dysregulation of at least two STAT signalling cascades (i.e. Stat3 and Stat5) is associated with cellular transformation. Signalling through the JAK/STAT pathway is initiated when a cytokine binds to its corresponding receptor. This leads to conformational changes in the cytoplasmic portion of the receptor, initiating activation of receptor associated members of the JAK family of kinases. The JAKs, in turn, mediate phosphorylation at the specific receptor tyrosine residues, which then serve as docking sites for STATs and other signalling molecules. Once recruited to the receptor, STATs also become phosphorylated by JAKs, on a single tyrosine residue. Activated STATs dissociate from the receptor, dimerise, translocate to the nucleus and bind to members of the GAS (gamma activated site) family of enhancers. The seven STAT proteins identified in mammals range in size from 750 and 850 amino acids. The chromosomal distribution of these STATs, as well as the identification of STATs in more primitive eukaryotes, suggest that this family arose from a single primordial gene. STATs share structurally and functionally conserved domains including: an N-terminal domain that strengthens interactions between STAT dimers on adjacent DNA-binding sites; a coiled-coil STAT domain that is implicated in protein-protein interactions; a DNA-binding domain with an immunoglobulin-like fold similar to p53 tumour suppressor protein; an EF-hand-like linker domain connecting the DNA-binding and SH2 domains; an SH2 domain (IPR000980 from INTERPRO) that acts as a phosphorylation-dependent switch to control receptor recognition and DNA-binding; and a C-terminal transactivation domain []. The crystal structure of the N terminus of Stat4 reveals a dimer. The interface of this dimer is formed by a ring-shaped element consisting of five short helices. Several studies suggest that this N-terminal dimerisation promotes cooperativity of binding to tandem GAS elements and with the transcriptional coactivator CBP/p300. This entry represents the DNA-binding domain, which has an immunoglobulin-like structural fold.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0004871 signal transducer activity, 0006355 regulation of transcription, DNA-dependent, 0007165 signal transduction, 0005634 nucleus; PDB: 1YVL_A 1BF5_A 1Y1U_B 3CWG_B 1BG1_A.
Probab=29.88 E-value=93 Score=25.69 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=35.7
Q ss_pred cccHHHHHHHHHHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 120 FIEREEVKGVILTLLVKEMILA-LLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 120 ~I~~~el~~~~~~~~~~~~l~~-~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
.++..++ ..+|.. .....|..++++++..+.+.+|..-....++.||+..|.+-
T Consensus 178 ~v~W~ql---------~~~L~~~F~~~~~R~L~~~~L~~L~~Kl~~~~~~~~~~~isw~~F~Ke 232 (254)
T PF02864_consen 178 KVPWPQL---------SEALSWQFSSETGRGLTDEQLQYLAEKLFGQNSSYNNMLISWSQFCKE 232 (254)
T ss_dssp EEEHHHH---------HHHHHHHHHHHSS----HHHHHHHHHHHHTSSS-GCC-EEEHHHHHTS
T ss_pred cccHHHH---------HHHHHHHHHHhhCCCCCHHHHHHHHHHHhCCcccCCCceeEHHHhhhc
Confidence 6777888 555553 34556889999999999987877666656788999999753
No 175
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=29.75 E-value=3.7e+02 Score=23.93 Aligned_cols=81 Identities=25% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCcccHHHHHHHHhhccCc-chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCC---cc
Q 041619 46 DGIISKEEFQLGLFKNHKK-QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTG---FI 121 (222)
Q Consensus 46 ~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G---~I 121 (222)
...+....|+.+|.+.... +..++-.+-..+|-.+++.|+-=||=.+-+.+. +-..+..-++.+...+-| ++
T Consensus 188 k~ivPW~~F~q~L~~~Hpi~~gleAmaLktTIDLtcnd~iS~FEFDvFTRLFq----Pw~tllkNWq~LavtHPGYmAFL 263 (563)
T KOG1785|consen 188 KTIVPWKTFRQALHKVHPISSGLEAMALKTTIDLTCNDFISNFEFDVFTRLFQ----PWKTLLKNWQTLAVTHPGYMAFL 263 (563)
T ss_pred cccccHHHHHHHHHhcCCCcchhHHHHhhceeccccccceeeehhhhHHHhhc----cHHHHHHhhhhhhccCCceeEEe
Confidence 4567777777777665332 334444555566777777777666665544443 233445556666677777 56
Q ss_pred cHHHHHHHH
Q 041619 122 EREEVKGVI 130 (222)
Q Consensus 122 ~~~el~~~~ 130 (222)
|++|+|.++
T Consensus 264 TYDEVk~RL 272 (563)
T KOG1785|consen 264 TYDEVKARL 272 (563)
T ss_pred eHHHHHHHH
Confidence 888885555
No 176
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=29.01 E-value=2.6e+02 Score=21.18 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=45.6
Q ss_pred HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcC
Q 041619 68 IADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESD 147 (222)
Q Consensus 68 ~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g 147 (222)
.++.+...-+.+.+|.|++..|..++...+. ..+..-|. .+..+++.++++.+|..+ +..+. .
T Consensus 84 ~Lehllg~~~~~~n~~i~~~~ff~~lQ~~lG-----dWIT~~~L----kh~n~MSk~Qik~L~~~I-----i~~ak---a 146 (175)
T PF04876_consen 84 FLEHLLGGEDDSTNGLIDIGKFFDILQPKLG-----DWITKNFL----KHPNRMSKDQIKTLCEQI-----IEMAK---A 146 (175)
T ss_pred HHHHHhcCCcCCcccceeHHHHHHHHHHHhh-----hHHHHHHH----hccchhhHHHHHHHHHHH-----HHHHh---c
Confidence 3455554444455788999999999986552 23333333 456799999997776443 22221 2
Q ss_pred CCCCHHHHHHHHHH
Q 041619 148 LILSDDIIEAIINK 161 (222)
Q Consensus 148 ~~~~~~~i~~~~~~ 161 (222)
.....+.-+.++..
T Consensus 147 e~~dtE~Ye~vwkK 160 (175)
T PF04876_consen 147 ESSDTEHYEKVWKK 160 (175)
T ss_pred cCCchHHHHHHHHH
Confidence 23445556666543
No 177
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=28.57 E-value=2.2e+02 Score=20.28 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 041619 106 VSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAII 159 (222)
Q Consensus 106 ~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~ 159 (222)
...+|.+++.-++-..+..++ +.+|.++ |....++.++.++
T Consensus 3 yvaAYLL~~lgGn~~psa~Di---------kkIl~sV----G~E~d~e~i~~vi 43 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDI---------KKILESV----GAEIDDERINLVL 43 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHH---------HHHHHHh----CcccCHHHHHHHH
Confidence 345778888888889999999 6666665 8899999988777
No 178
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=28.46 E-value=29 Score=27.51 Aligned_cols=59 Identities=25% Similarity=0.331 Sum_probs=39.8
Q ss_pred HHHhhcCCCCCCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 041619 35 LFKKLSSSLVDDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSI 95 (222)
Q Consensus 35 ~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~ 95 (222)
.|-.+|.. -.+|++|..++. -|......-+.-..+.|...|.+++|.|..+|+-..+..
T Consensus 192 qf~qld~~-p~d~~~sh~el~-pl~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 192 QFGQLDQH-PIDGYLSHTELA-PLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred eeccccCC-Cccccccccccc-cccCCcccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 35556653 047888888876 332222223334578999999999999999998776543
No 179
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.25 E-value=1.2e+02 Score=22.16 Aligned_cols=47 Identities=21% Similarity=0.230 Sum_probs=34.9
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCH
Q 041619 116 SQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDP 176 (222)
Q Consensus 116 d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~ 176 (222)
+..|.||.+|- .++|.- ...++.++++.-.+.+|..-|....|..-.
T Consensus 51 ~~~~~iTlqEa---------~qILnV-----~~~ln~eei~k~yehLFevNdkskGGSFYL 97 (132)
T KOG3442|consen 51 NSNGKITLQEA---------QQILNV-----KEPLNREEIEKRYEHLFEVNDKSKGGSFYL 97 (132)
T ss_pred cccccccHHHH---------hhHhCC-----CCCCCHHHHHHHHHHHHhccCcccCcceee
Confidence 34577999999 666521 345778899999999999888887775443
No 180
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=27.30 E-value=1.7e+02 Score=19.89 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=37.5
Q ss_pred CCCcccHHHHHHHHhhcc----Cc--chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCC
Q 041619 45 DDGIISKEEFQLGLFKNH----KK--QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQT 118 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~----~~--~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 118 (222)
-||.++..|......... .. ....+..+|......- ...+..++...+....+......-+..++.+-. -|
T Consensus 15 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ia~--aD 91 (111)
T cd07176 15 ADGDIDDAELQAIEALLRSLPVLSGFDRERLIALLDKLLALL-RPEGLAALLKAAAKLLPPELRETAFAVAVDIAA--AD 91 (111)
T ss_pred hccCCCHHHHHHHHHHHHcCccccCCCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--cc
Confidence 467787777664432221 11 2222333443332220 024467777777665531122222444444443 45
Q ss_pred CcccHHHH
Q 041619 119 GFIEREEV 126 (222)
Q Consensus 119 G~I~~~el 126 (222)
|.++..|-
T Consensus 92 G~~~~~E~ 99 (111)
T cd07176 92 GEVDPEER 99 (111)
T ss_pred CCCCHHHH
Confidence 77777776
No 181
>PF05920 Homeobox_KN: Homeobox KN domain; InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=27.03 E-value=68 Score=18.21 Aligned_cols=22 Identities=23% Similarity=0.339 Sum_probs=17.7
Q ss_pred hhHHHHHhhCCCCHHHHHHHHH
Q 041619 13 VNHAALAAQTHFKETEIEILYL 34 (222)
Q Consensus 13 ~~~~~~~~~~~~~~~ei~~l~~ 34 (222)
++..+|++.++++..+|...+.
T Consensus 14 ~ek~~L~~~tgls~~Qi~~WF~ 35 (40)
T PF05920_consen 14 EEKEELAKQTGLSRKQISNWFI 35 (40)
T ss_dssp HHHHHHHHHHTS-HHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHH
Confidence 8889999999999998887653
No 182
>PLN02222 phosphoinositide phospholipase C 2
Probab=26.93 E-value=2.6e+02 Score=26.10 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccC---cchHHHHHHHHHHhc-CCCCcccHHHHHHHHH
Q 041619 23 HFKETEIEILYLLFKKLSSSLVDDGIISKEEFQLGLFKNHK---KQSLIADRVFQLFDL-KRDGGIEFEEFVRSLS 94 (222)
Q Consensus 23 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~---~~~~~~~~lf~~~d~-~~~g~i~f~eF~~~~~ 94 (222)
...+.++..++..|. +++.++.++|..+|...-. .....++.|+..+.. ...+.++++.|..++.
T Consensus 21 ~~~~~ei~~if~~~~-------~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~ 89 (581)
T PLN02222 21 SEAPREIKTIFEKYS-------ENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLF 89 (581)
T ss_pred CCCcHHHHHHHHHhc-------CCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhc
Confidence 346666666665542 3468999999888855322 234566777776532 2345688888888874
No 183
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=26.89 E-value=1.5e+02 Score=21.25 Aligned_cols=44 Identities=23% Similarity=0.376 Sum_probs=26.4
Q ss_pred HHHHhCCCCCCccCHHHHHHHHhhChhhhhhcCcccchhhhccCC
Q 041619 162 AFEDADFKGDGKIDPEEWKEFVARNPSLLKNMTIPYLKDITTAFP 206 (222)
Q Consensus 162 ~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (222)
.++..+.+. ..++-++....+..+|.+++.=-+..-+.+...||
T Consensus 64 ~~r~L~~~~-~~~~~~~~~~~i~~~~~LikRPivv~~~~~~iG~~ 107 (117)
T COG1393 64 TYRELNLDK-EDLSDEELIEALLENPSLIKRPIVVDNKKLRVGFN 107 (117)
T ss_pred hHHHcCCcc-cccChHHHHHHHHhChhhccCCeEEeCCceEecCC
Confidence 446666332 46888888888988887766433332333555554
No 184
>PLN02230 phosphoinositide phospholipase C 4
Probab=26.54 E-value=2.3e+02 Score=26.65 Aligned_cols=61 Identities=5% Similarity=-0.030 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CCcHHHHHHHhhhh-------cCCCCCcccHHHH
Q 041619 65 QSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPE--APHAEKVSFAFQLF-------DVSQTGFIEREEV 126 (222)
Q Consensus 65 ~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~--~~~~~~~~~~F~~~-------D~d~~G~I~~~el 126 (222)
+...+..+|..+..++ +.++.++|..++...... ....+.+..++..+ ..-+.+.++.+.|
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F 96 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDF 96 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHH
Confidence 4556666666664333 567777777776665521 12334444444332 1123345777777
No 185
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=25.15 E-value=3.6e+02 Score=24.00 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccHHHH
Q 041619 69 ADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIEREEV 126 (222)
Q Consensus 69 ~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el 126 (222)
+...++..-.+ ...|.|..|..++....+. ..--++..+=..+|..++++|+.-||
T Consensus 177 A~~FWr~~fg~-k~ivPW~~F~q~L~~~Hpi-~~gleAmaLktTIDLtcnd~iS~FEF 232 (563)
T KOG1785|consen 177 AAEFWRKHFGK-KTIVPWKTFRQALHKVHPI-SSGLEAMALKTTIDLTCNDFISNFEF 232 (563)
T ss_pred HHHHHHHhcCC-cccccHHHHHHHHHhcCCC-cchhHHHHhhceeccccccceeeehh
Confidence 44445444333 3479999999999887633 33344455667889999999999988
No 186
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=24.98 E-value=1.4e+02 Score=26.38 Aligned_cols=56 Identities=21% Similarity=0.312 Sum_probs=35.8
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Q 041619 107 SFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEF 182 (222)
Q Consensus 107 ~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~ 182 (222)
..+|..+. --+|+|+-..- +..+. +..+++..+-.+. +..|.|.||.++-+||.-.
T Consensus 447 de~fy~l~-p~~gk~sg~~a---------k~~mv------~sklpnsvlgkiw----klad~d~dg~ld~eefala 502 (532)
T KOG1954|consen 447 DEIFYTLS-PVNGKLSGRNA---------KKEMV------KSKLPNSVLGKIW----KLADIDKDGMLDDEEFALA 502 (532)
T ss_pred Hhhhhccc-ccCceeccchh---------HHHHH------hccCchhHHHhhh----hhhcCCcccCcCHHHHHHH
Confidence 34555543 23566666555 33221 3356666665555 8999999999999999744
No 187
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=24.94 E-value=1.8e+02 Score=20.31 Aligned_cols=27 Identities=19% Similarity=0.370 Sum_probs=21.0
Q ss_pred HHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 164 EDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 164 ~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
+....+. ..++-+++..++..+|.+++
T Consensus 64 ~~l~~~~-~~ls~~e~i~ll~~~P~Lik 90 (112)
T cd03034 64 KELGLAD-PELSDEELIDAMAAHPILIE 90 (112)
T ss_pred HHcCCCc-cCCCHHHHHHHHHhCcCccc
Confidence 4444443 46899999999999999987
No 188
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=24.87 E-value=1.6e+02 Score=19.48 Aligned_cols=35 Identities=11% Similarity=0.241 Sum_probs=19.3
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCC
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKR 80 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~ 80 (222)
..|+||+.++..+|.... .....++.++..+...+
T Consensus 18 ~~G~lT~~eI~~~L~~~~-~~~e~id~i~~~L~~~g 52 (82)
T PF03979_consen 18 KKGYLTYDEINDALPEDD-LDPEQIDEIYDTLEDEG 52 (82)
T ss_dssp HHSS-BHHHHHHH-S-S----HHHHHHHHHHHHTT-
T ss_pred hcCcCCHHHHHHHcCccC-CCHHHHHHHHHHHHHCC
Confidence 468888888888885332 23344677777766554
No 189
>PF09107 SelB-wing_3: Elongation factor SelB, winged helix ; InterPro: IPR015191 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 3". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; GO: 0003723 RNA binding, 0003746 translation elongation factor activity, 0005525 GTP binding, 0001514 selenocysteine incorporation, 0005737 cytoplasm; PDB: 2PJP_A 2UWM_A 1WSU_B 1LVA_A 2PLY_A.
Probab=24.67 E-value=1.7e+02 Score=17.55 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=23.5
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHHHhcCC
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQLFDLKR 80 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~ 80 (222)
.+|.++..+|++.+ ..+...+-.+++.+|..+
T Consensus 7 ~~~~itv~~~rd~l----g~sRK~ai~lLE~lD~~g 38 (50)
T PF09107_consen 7 KNGEITVAEFRDLL----GLSRKYAIPLLEYLDREG 38 (50)
T ss_dssp TTSSBEHHHHHHHH----TS-HHHHHHHHHHHHHTT
T ss_pred cCCcCcHHHHHHHH----CccHHHHHHHHHHHhccC
Confidence 57889999999888 345566677777887654
No 190
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=24.30 E-value=3.4e+02 Score=24.72 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=69.2
Q ss_pred cccHHHHHHHHh----hccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCcHHHHHHHhhhhcCCCCCcccH
Q 041619 48 IISKEEFQLGLF----KNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEAPHAEKVSFAFQLFDVSQTGFIER 123 (222)
Q Consensus 48 ~i~~~ef~~~l~----~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~ 123 (222)
+-+..+|--.|. .+...++..+..+|+..|.++=-.++..++.+++..+. .+. ...- ..-|.|+.
T Consensus 105 RaTvsemGPlLLsrlL~LNdtQ~gvL~i~F~~ADd~gLlLlDLkDLra~l~~v~---e~~---~e~~-----~~yG~is~ 173 (502)
T PF05872_consen 105 RATVSEMGPLLLSRLLELNDTQEGVLNIVFRIADDEGLLLLDLKDLRAMLQYVS---ENA---KELS-----AEYGNISS 173 (502)
T ss_pred EeeHHhhchHHHHHHhccchHHHHHHHHHHHHhccCCCccccHHHHHHHHHHHH---hhH---HHHH-----HHcCCccH
Confidence 455566543331 12222555678899999998888899999999988764 111 1222 23488888
Q ss_pred HHHHHHHHHHHHHHHHHHH--HhhcCC----CCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhh
Q 041619 124 EEVKGVILTLLVKEMILAL--LKESDL----ILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKN 192 (222)
Q Consensus 124 ~el~~~~~~~~~~~~l~~~--~~~~g~----~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~ 192 (222)
.-+ ..++.++ ++..|- .-+.-++++++ ..|.+|.|.|+.=+--+++ +.|.+...
T Consensus 174 aS~---------gaI~R~ll~LE~qG~d~FFGEPaldi~Dl~-----r~~~~GrG~IniL~a~~l~-~~P~LysT 233 (502)
T PF05872_consen 174 ASI---------GAIQRALLVLEQQGGDQFFGEPALDIEDLM-----RTDADGRGVINILAADKLM-NSPKLYST 233 (502)
T ss_pred HHH---------HHHHHHHHHHHHcchHhhCCCccCCHHHHh-----ccCCCCCEEEEEEEhHhhh-hCcHHHHH
Confidence 888 3333332 233221 11223455555 5677888988865555544 35555443
No 191
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=24.22 E-value=2e+02 Score=18.35 Aligned_cols=31 Identities=13% Similarity=0.288 Sum_probs=24.0
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 041619 117 QTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIIN 160 (222)
Q Consensus 117 ~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~ 160 (222)
.+-.|+.+-+ +.++... |...++.++..+.+
T Consensus 28 ~NPpine~mi---------r~M~~QM----G~kpSekqi~Q~m~ 58 (64)
T PF03672_consen 28 ENPPINEKMI---------RAMMMQM----GRKPSEKQIKQMMR 58 (64)
T ss_pred HCCCCCHHHH---------HHHHHHh----CCCccHHHHHHHHH
Confidence 3568888888 7776665 99999999877764
No 192
>PRK03095 prsA peptidylprolyl isomerase; Reviewed
Probab=23.76 E-value=4.3e+02 Score=21.98 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=10.7
Q ss_pred CCCcccHHHHHHHHHh
Q 041619 80 RDGGIEFEEFVRSLSI 95 (222)
Q Consensus 80 ~~g~i~f~eF~~~~~~ 95 (222)
.+|.|+-.||...+..
T Consensus 31 ~~~~IT~~e~~~~~k~ 46 (287)
T PRK03095 31 KAGDITKDEFYEQMKT 46 (287)
T ss_pred cCCcccHHHHHHHHHH
Confidence 4567777777776654
No 193
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=23.62 E-value=1.4e+02 Score=21.07 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=18.1
Q ss_pred CccCHHHHHHHHhhChhhhhh
Q 041619 172 GKIDPEEWKEFVARNPSLLKN 192 (222)
Q Consensus 172 g~Is~eeF~~~~~~~~~~~~~ 192 (222)
..+|-++...++..+|.+++.
T Consensus 70 ~~ls~~e~~~ll~~~P~LikR 90 (113)
T cd03033 70 EALDEEEALALMIADPLLIRR 90 (113)
T ss_pred cCCCHHHHHHHHHhCcceeeC
Confidence 357999999999999999873
No 194
>PF04783 DUF630: Protein of unknown function (DUF630); InterPro: IPR006868 This region is sometimes found at the N terminus of putative plant bZIP proteins IPR006867 from INTERPRO. The function of this conserved region is not known.
Probab=23.32 E-value=61 Score=20.42 Aligned_cols=10 Identities=40% Similarity=0.498 Sum_probs=8.9
Q ss_pred CCcccccccc
Q 041619 1 MGCVCMKQRL 10 (222)
Q Consensus 1 Mg~~~s~~~~ 10 (222)
||+++||+..
T Consensus 1 MGC~~SK~d~ 10 (60)
T PF04783_consen 1 MGCSQSKLDD 10 (60)
T ss_pred CCCCcccccC
Confidence 9999999965
No 195
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=23.21 E-value=7.6e+02 Score=24.68 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=53.7
Q ss_pred HHHHHHHhhccCcchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC---------CcHHHHHHHhhhhcCCC----C
Q 041619 52 EEFQLGLFKNHKKQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHPEA---------PHAEKVSFAFQLFDVSQ----T 118 (222)
Q Consensus 52 ~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~~~---------~~~~~~~~~F~~~D~d~----~ 118 (222)
+.|..++.++ .+...++.||..+..++.-.++-++++.++....++. ....++..+...|..+. +
T Consensus 208 e~f~~~l~kl--cpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~ 285 (1189)
T KOG1265|consen 208 EKFYRLLNKL--CPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEK 285 (1189)
T ss_pred HHHHHHHHhc--CCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhc
Confidence 3344444433 3556789999999888878899999999998765322 34567888888886665 6
Q ss_pred CcccHHHH
Q 041619 119 GFIEREEV 126 (222)
Q Consensus 119 G~I~~~el 126 (222)
|.++.+-|
T Consensus 286 gqms~dgf 293 (1189)
T KOG1265|consen 286 GQMSTDGF 293 (1189)
T ss_pred cccchhhh
Confidence 89999888
No 196
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=23.20 E-value=3.4e+02 Score=20.69 Aligned_cols=51 Identities=16% Similarity=0.261 Sum_probs=30.9
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q 041619 101 PHAEKVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFED 165 (222)
Q Consensus 101 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~ 165 (222)
.....+..+++.+-.++...++..+| ...+ ..|..+++++++..+..++..
T Consensus 82 kt~~Ql~AA~~Yl~~~~~~~~d~~~F---------e~~c-----GVGV~VT~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 82 KTNLQLDAALKYLKSNPSEPIDVAEF---------EKAC-----GVGVVVTPEQIEAAVEKYIEE 132 (164)
T ss_dssp -SHHHHHHHHHHHHHHGG-G--HHHH---------HHTT-----TTT----HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHH---------HHHc-----CCCeEECHHHHHHHHHHHHHH
Confidence 35677888888887666678999999 5433 127789999999888766544
No 197
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=22.32 E-value=71 Score=20.37 Aligned_cols=16 Identities=25% Similarity=0.700 Sum_probs=15.0
Q ss_pred hhhcCCCCCcccHHHH
Q 041619 111 QLFDVSQTGFIEREEV 126 (222)
Q Consensus 111 ~~~D~d~~G~I~~~el 126 (222)
++||+..+.+|+.+++
T Consensus 10 RLYDT~~s~YiTL~di 25 (64)
T PF07879_consen 10 RLYDTETSSYITLEDI 25 (64)
T ss_pred ccccCCCceeEeHHHH
Confidence 5799999999999999
No 198
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=22.28 E-value=3.3e+02 Score=24.89 Aligned_cols=73 Identities=16% Similarity=0.207 Sum_probs=51.2
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhC-----CCCCCccCHHHH
Q 041619 105 KVSFAFQLFDVSQTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDAD-----FKGDGKIDPEEW 179 (222)
Q Consensus 105 ~~~~~F~~~D~d~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d-----~~~dg~Is~eeF 179 (222)
.-..+|.+|-...++.+..--| .++|.+ .|..-++..+.++++.+ +.+| ....+.++.+-|
T Consensus 87 leDLLFyLiaegq~ekipihKF---------iTALks----tGLrtsDPRLk~mMd~m-Kd~dq~~~e~S~gw~LdKDlF 152 (622)
T KOG0506|consen 87 LEDLLFYLIAEGQSEKIPIHKF---------ITALKS----TGLRTSDPRLKDMMDEM-KDVDQEENESSSGWLLDKDLF 152 (622)
T ss_pred hhhhhhHHhhcCCcCcccHHHH---------HHHHHH----cCCCcCCchHHHHHHHH-HHHHhhhcccccceeecHHHH
Confidence 3456788887777799999888 555444 38888877888887655 3333 233357999999
Q ss_pred HHHHhhChhhhh
Q 041619 180 KEFVARNPSLLK 191 (222)
Q Consensus 180 ~~~~~~~~~~~~ 191 (222)
.+++.....++.
T Consensus 153 KkcI~sSI~lvS 164 (622)
T KOG0506|consen 153 KKCIFSSIVLVS 164 (622)
T ss_pred HHhhccchhHHH
Confidence 999876665544
No 199
>PRK00523 hypothetical protein; Provisional
Probab=22.16 E-value=2.4e+02 Score=18.46 Aligned_cols=32 Identities=13% Similarity=0.239 Sum_probs=24.3
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 041619 117 QTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINK 161 (222)
Q Consensus 117 ~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~ 161 (222)
.+-.|+.+-+ +.++... |...++.++..+.+.
T Consensus 36 ~NPpine~mi---------r~M~~QM----GqKPSekki~Q~m~~ 67 (72)
T PRK00523 36 ENPPITENMI---------RAMYMQM----GRKPSESQIKQVMRS 67 (72)
T ss_pred HCcCCCHHHH---------HHHHHHh----CCCccHHHHHHHHHH
Confidence 4568888888 7776665 999999998777643
No 200
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=21.88 E-value=94 Score=16.72 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=15.9
Q ss_pred CCccCHHHHHHHHhhChhhhh
Q 041619 171 DGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 171 dg~Is~eeF~~~~~~~~~~~~ 191 (222)
.|.|++++++.++.+.-.+..
T Consensus 2 ~~~i~~~~~~d~a~rv~~f~~ 22 (33)
T PF09373_consen 2 SGTISKEEYLDMASRVNNFYE 22 (33)
T ss_pred CceecHHHHHHHHHHHHHHHH
Confidence 467888888888877666654
No 201
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=21.75 E-value=2.9e+02 Score=19.30 Aligned_cols=27 Identities=19% Similarity=0.413 Sum_probs=20.8
Q ss_pred HHhCCCCCCccCHHHHHHHHhhChhhhh
Q 041619 164 EDADFKGDGKIDPEEWKEFVARNPSLLK 191 (222)
Q Consensus 164 ~~~d~~~dg~Is~eeF~~~~~~~~~~~~ 191 (222)
+....+. ..+|-++++.++..+|.+++
T Consensus 65 k~l~~~~-~~ls~~e~i~~l~~~p~Lik 91 (115)
T cd03032 65 KNLNIDI-DELSLSELIRLISEHPSLLR 91 (115)
T ss_pred HHcCCCc-ccCCHHHHHHHHHhChhhee
Confidence 4444343 45899999999999999987
No 202
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=21.33 E-value=2.7e+02 Score=18.83 Aligned_cols=54 Identities=28% Similarity=0.270 Sum_probs=34.5
Q ss_pred CCCcccHHHHHHHHhhccC-cchHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 041619 45 DDGIISKEEFQLGLFKNHK-KQSLIADRVFQLFDLKRDGGIEFEEFVRSLSIFHP 98 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~f~eF~~~~~~~~~ 98 (222)
..-.|...+|+.+|..... ....++..+-..+|--+++.|+.=||-.+.+.+.|
T Consensus 19 ~r~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtRlFqP 73 (85)
T PF02761_consen 19 KRTIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTRLFQP 73 (85)
T ss_dssp T-SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHHHT--
T ss_pred CCeEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHHHHhh
Confidence 3456888888888766432 34455666667777778888888888777665553
No 203
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=21.32 E-value=2.4e+02 Score=18.97 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=23.2
Q ss_pred cccHHHHHHHHHhhCCCC-------------------CcHHHHHHHhhhhcCCCCCcc
Q 041619 83 GIEFEEFVRSLSIFHPEA-------------------PHAEKVSFAFQLFDVSQTGFI 121 (222)
Q Consensus 83 ~i~f~eF~~~~~~~~~~~-------------------~~~~~~~~~F~~~D~d~~G~I 121 (222)
.++|+++..-+...++-. +...++..||++|-.+++-.+
T Consensus 19 ~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~~EL~EA~rl~~~n~~~~l 76 (83)
T cd06404 19 SISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLYELNKDSEL 76 (83)
T ss_pred CcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCHHHHHHHHHHHHhcCcccE
Confidence 466666666665544211 345667777777776665443
No 204
>PF05559 DUF763: Protein of unknown function (DUF763); InterPro: IPR008482 This family consists of several uncharacterised bacterial and archaeal proteins of unknown function.
Probab=21.24 E-value=1.2e+02 Score=25.84 Aligned_cols=47 Identities=17% Similarity=0.187 Sum_probs=37.0
Q ss_pred CccccccccCchhHHHHHhhCCCCHHHHHHHHHHHHhhcCCCCCCCc
Q 041619 2 GCVCMKQRLKSVNHAALAAQTHFKETEIEILYLLFKKLSSSLVDDGI 48 (222)
Q Consensus 2 g~~~s~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~ 48 (222)
|+......++|+++..+.....++.+++....++=.+.|..+..||+
T Consensus 89 GGKG~~sr~tP~El~~~~~~~gld~~~L~~~SRL~AKVDn~alQDGy 135 (319)
T PF05559_consen 89 GGKGKHSRKTPEELEEIAERFGLDAEELVRASRLVAKVDNAALQDGY 135 (319)
T ss_pred cCCchhhhcCHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhHhhcccc
Confidence 33444455567999999999999999999999888888876666774
No 205
>PF13608 Potyvirid-P3: Protein P3 of Potyviral polyprotein
Probab=20.81 E-value=1.4e+02 Score=26.80 Aligned_cols=50 Identities=12% Similarity=0.140 Sum_probs=26.5
Q ss_pred CCCcccHHHHHHHHhhccCcchHHHHHHHHH--Hhc--CCCCcccHHHHHHHHH
Q 041619 45 DDGIISKEEFQLGLFKNHKKQSLIADRVFQL--FDL--KRDGGIEFEEFVRSLS 94 (222)
Q Consensus 45 ~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~--~d~--~~~g~i~f~eF~~~~~ 94 (222)
.++.-+.+||.+.+..........++.++.. +.. ...+...++..+++++
T Consensus 301 ~~~~pt~eEF~e~v~~~~p~L~~~~~~~~~~~~V~hQaK~~~e~~lEkIiAf~a 354 (445)
T PF13608_consen 301 HGKLPTEEEFLEYVEEVNPELLEFAEEMIEEEEVEHQAKTASEKNLEKIIAFVA 354 (445)
T ss_pred hCCCCCHHHHHHHHHhcCchHHHHHHHHhCCCcEEecCCChHHHHHHHHHHHHH
Confidence 6788999999998865433333333333311 000 1234456666665554
No 206
>cd08327 CARD_RAIDD Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain. Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodime
Probab=20.80 E-value=2.7e+02 Score=19.12 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=35.6
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhhChhhhhhc
Q 041619 117 QTGFIEREEVKGVILTLLVKEMILALLKESDLILSDDIIEAIINKAFEDADFKGDGKIDPEEWKEFVARNPSLLKNM 193 (222)
Q Consensus 117 ~~G~I~~~el~~~~~~~~~~~~l~~~~~~~g~~~~~~~i~~~~~~~f~~~d~~~dg~Is~eeF~~~~~~~~~~~~~~ 193 (222)
++|.||.++. ..+- +..-+.+.+..++ ...- ..|.-.|..|+.++...|.+.+.+
T Consensus 32 ~~gIlT~~~~---------e~I~-------a~~T~~~k~~~LL----diLp--~RG~~AF~~F~~aL~e~~~l~~~l 86 (94)
T cd08327 32 QEGILTESHV---------EEIE-------SQTTSRRKTMKLL----DILP--SRGPKAFHAFLDSLEEFPWVRDKL 86 (94)
T ss_pred hCCCCCHHHH---------HHHH-------ccCChHHHHHHHH----HHHH--hhChhHHHHHHHHHHHHHHHHHHH
Confidence 4678888888 4432 2233455565555 4433 335568999999998888777654
Done!