Your job contains 1 sequence.
>041621
MENSTNSDETYDRGCRPSPSSIDQNDQTSTSETPVYSTMSADSFAYHRTNSETSAFSDPI
DDNSSCSEPSPSNWLVSRSGQPALGRPEMRQQKTVVDKNLDDQESMDLELELMKERFAKL
LLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCD
YIVEFVSESQNLRDGREVEDILESFQDTEFWYAEQGSMSSNSTRSGSFRRVIVQRKEEKW
WLPVPCVPPGGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGK
ACLGDFIYRYMYTTEKFSPDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSS
WDMVKDLMSETDRSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLE
SYSRVLEGLAFNTVAWVEDVLFVDRSVRNQDQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041621
(452 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198220 - symbol:ROPGEF2 "ROP (rho of plants) ... 927 4.9e-155 2
TAIR|locus:2126071 - symbol:ROPGEF3 "ROP (rho of plants) ... 916 1.9e-153 2
TAIR|locus:2050699 - symbol:ROPGEF4 "ROP (rho of plants) ... 1224 1.5e-124 1
TAIR|locus:2185153 - symbol:ROPGEF7 "ROP (rho of plants) ... 729 3.6e-101 2
TAIR|locus:2153684 - symbol:ROPGEF5 "ROP (rho of plants) ... 673 2.9e-97 2
TAIR|locus:2121828 - symbol:ROPGEF1 "ROP (rho of plants) ... 658 2.6e-96 2
TAIR|locus:2078976 - symbol:ROPGEF6 "ROP (rho of plants) ... 616 1.0e-90 2
TAIR|locus:2091742 - symbol:ROPGEF8 "ROP (rho of plants) ... 529 1.7e-78 2
TAIR|locus:2119320 - symbol:ROPGEF9 "ROP (rho of plants) ... 517 5.9e-78 2
TAIR|locus:2017844 - symbol:ROPGEF12 "ROP (rho of plants)... 748 4.0e-74 1
TAIR|locus:2180781 - symbol:ROPGEF10 "ROP (rho of plants)... 510 5.3e-73 2
TAIR|locus:2018169 - symbol:ROPGEF11 "ROP (rho of plants)... 729 4.1e-72 1
TAIR|locus:2093467 - symbol:ROPGEF13 "ROP (rho of plants)... 474 1.6e-69 2
TAIR|locus:2028701 - symbol:ROPGEF14 "ROP (rho of plants)... 397 3.2e-61 2
>TAIR|locus:2198220 [details] [associations]
symbol:ROPGEF2 "ROP (rho of plants) guanine nucleotide
exchange factor 2" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005089 EMBL:AC009273 HOGENOM:HOG000238290 IPI:IPI00543460
PIR:A86148 RefSeq:NP_171676.1 UniGene:At.51450
ProteinModelPortal:Q9LQ89 SMR:Q9LQ89 EnsemblPlants:AT1G01700.1
GeneID:839250 KEGG:ath:AT1G01700 TAIR:At1g01700 eggNOG:NOG241756
OMA:ICEYIVE PhylomeDB:Q9LQ89 ProtClustDB:CLSN2682874
Genevestigator:Q9LQ89 GermOnline:AT1G01700 Uniprot:Q9LQ89
Length = 485
Score = 927 (331.4 bits), Expect = 4.9e-155, Sum P(2) = 4.9e-155
Identities = 177/254 (69%), Positives = 210/254 (82%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXX--VIVQRKEEKWWLPVPCVPPGGLSEKSR 257
+ L+SFQ TEFWYAE+G VIVQRKEEKWWLP+P VP GLSEK+R
Sbjct: 232 EALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKAR 291
Query: 258 KHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKF 317
K L+ KR+ NQIHKAAMAINS+IL EM+IPDSYMA LPKSGKA GD IYR+M ++ +F
Sbjct: 292 KQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRF 351
Query: 318 SPDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKN 377
SP+ LLD L I SEHEAL+LAD VEASMYTWRRKAC+++SKSSW+MVKDLMS T+RSDKN
Sbjct: 352 SPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKN 411
Query: 378 HLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWV 437
++LA RAESLLF LKQRYPEL+QTSLD CKI CN+DVG+AVLESYSRVLEGLAFN VAW+
Sbjct: 412 YVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWI 471
Query: 438 EDVLFVDRSVRNQD 451
+DVL+VD+++R ++
Sbjct: 472 DDVLYVDKTMRGEE 485
Score = 606 (218.4 bits), Expect = 4.9e-155, Sum P(2) = 4.9e-155
Identities = 132/212 (62%), Positives = 155/212 (73%)
Query: 1 MENSTNSDETYDRGCRPSPSSIDQNDQTSTSETPVYSTMSADSFAYHRTNSETSA--FSD 58
MEN N +E D G SP ID ND S SETPVYSTMS DSFAYHRT SETS FSD
Sbjct: 1 MENLPNHEENDDVGYHQSPGPIDPNDH-SASETPVYSTMSTDSFAYHRTCSETSGGGFSD 59
Query: 59 PIDDNSS-CSEPSPSNW-LVSRSGQPALGR-P---EMRQQKTVVDKNLDDQESMDLELEL 112
ID+ SS C+E SPS+W +++ S A P +++ + D++L QE + ELE
Sbjct: 60 QIDETSSFCTEASPSDWPVLTESNNSASSNFPTVFDLKHNQIETDEHLAVQEISEPELET 119
Query: 113 MKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREM 172
MKERF+KLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRL PL+ E+K WKREM
Sbjct: 120 MKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREM 179
Query: 173 DCLLSVCDYIVEFVSESQNLRDGREVEDILES 204
+CLLSVCDYI EF+ +SQNL +G VE ++ES
Sbjct: 180 NCLLSVCDYIFEFIPKSQNLSNGATVE-VMES 210
>TAIR|locus:2126071 [details] [associations]
symbol:ROPGEF3 "ROP (rho of plants) guanine nucleotide
exchange factor 3" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002687 GO:GO:0005089 HOGENOM:HOG000238290
eggNOG:NOG241756 ProtClustDB:CLSN2682874 EMBL:BT030385
IPI:IPI00891780 RefSeq:NP_001118903.1 UniGene:At.50311
ProteinModelPortal:A4IJ27 SMR:A4IJ27 DNASU:827967
EnsemblPlants:AT4G00460.2 GeneID:827967 KEGG:ath:AT4G00460
TAIR:At4g00460 InParanoid:A4IJ27 OMA:PRSDIYI PhylomeDB:A4IJ27
Genevestigator:A4IJ27 Uniprot:A4IJ27
Length = 473
Score = 916 (327.5 bits), Expect = 1.9e-153, Sum P(2) = 1.9e-153
Identities = 171/254 (67%), Positives = 212/254 (83%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXX--VIVQRKEEKWWLPVPCVPPGGLSEKSR 257
+ L+SFQ+TEFWYAE+G VIVQRKEEKWWLPVP VP GLS+K+R
Sbjct: 220 EALDSFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKAR 279
Query: 258 KHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKF 317
K L++KR+ NQIHKAAMAINS+IL+EMEIPDSYM LPK GK+ +GD IYRYM + +F
Sbjct: 280 KQLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKSSVGDSIYRYMSGSGRF 339
Query: 318 SPDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKN 377
P+ LLDCL+I+SEHEA++LAD VEASMYTWRRK+C+S+SK+SW+MVKDLMS T+R+DKN
Sbjct: 340 FPEQLLDCLNISSEHEAVQLADRVEASMYTWRRKSCLSNSKNSWNMVKDLMSTTERTDKN 399
Query: 378 HLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWV 437
+++A RAE+LLF LKQRYPEL+QTSLD CKIQ N+DVG+AVLESYSRVLEGLAFN VAW+
Sbjct: 400 YVMAERAETLLFCLKQRYPELSQTSLDICKIQYNKDVGKAVLESYSRVLEGLAFNIVAWI 459
Query: 438 EDVLFVDRSVRNQD 451
+DVL+VD+++R +
Sbjct: 460 DDVLYVDKTMRGSE 473
Score = 602 (217.0 bits), Expect = 1.9e-153, Sum P(2) = 1.9e-153
Identities = 135/208 (64%), Positives = 150/208 (72%)
Query: 1 MENSTNSDETYDRGCRPSPSSIDQNDQTSTSETPVYSTMSADSFAYHRTNSET-SAFSDP 59
MEN +N DE D SP SIDQNDQ++ ETPVYSTMS DSF Y RT SET S FSD
Sbjct: 1 MENLSNPDENDDH---QSPRSIDQNDQSAV-ETPVYSTMSIDSFVYPRTCSETTSGFSDQ 56
Query: 60 IDD-NSSCSEPSPSNW--LVSRSGQPALGRPEMRQQKTVVDKNLDDQESMDLELELMKER 116
ID+ NS CSE SP NW L L EM+ + +V QE + ELE MKER
Sbjct: 57 IDETNSFCSEASPCNWPVLTESKSSKCLSGLEMQSNECLVV-----QEISEPELETMKER 111
Query: 117 FAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLL 176
FAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRL PL+ EK+ALWKREM+CLL
Sbjct: 112 FAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKREMNCLL 171
Query: 177 SVCDYIVEFVSESQNLRDGREVEDILES 204
SVCDYIVEF+ QNL +G VE ++ES
Sbjct: 172 SVCDYIVEFIPRCQNLSNGATVE-VMES 198
>TAIR|locus:2050699 [details] [associations]
symbol:ROPGEF4 "ROP (rho of plants) guanine nucleotide
exchange factor 4" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048767 "root hair elongation" evidence=IMP]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA] [GO:0009531
"secondary cell wall" evidence=IDA] [GO:0009664 "plant-type cell
wall organization" evidence=IMP] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0048767 GO:GO:0005089 GO:GO:0009531
GO:GO:0009664 HOGENOM:HOG000238290 EMBL:AK229390 IPI:IPI00536205
RefSeq:NP_182113.2 UniGene:At.36575 ProteinModelPortal:Q0WNP7
SMR:Q0WNP7 DIP:DIP-59395N PRIDE:Q0WNP7 EnsemblPlants:AT2G45890.1
GeneID:819197 KEGG:ath:AT2G45890 TAIR:At2g45890 InParanoid:Q0WNP7
OMA:LEISSEH PhylomeDB:Q0WNP7 ProtClustDB:CLSN2918276
Genevestigator:Q0WNP7 Uniprot:Q0WNP7
Length = 463
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 261/465 (56%), Positives = 322/465 (69%)
Query: 18 SPSSIDQNDQTSTSE--TPVYSTMSADSFAYHRTNSETSAFSDPIDDNSSCSEPSPSNWL 75
S S+ DQN+ T TS +P T S S HR + + S ++ P + N+ +
Sbjct: 3 SSSNSDQNEGTPTSSVSSPYRRTYSDISGLSHRFDVQ-SFYNRPSNTNAVVLSGHEED-- 59
Query: 76 VSRSGQPALGRP--EMRQQKTVVDKNLDDQESMDLELELMKERFAKLLLGEDMSGSGKGV 133
VS + ++ D ++D E D ELE+M+ERFAKLLLGEDMSGSGKGV
Sbjct: 60 VSEDAEEPKDDVVNDVHGDGDEEDSDIDSAE--DAELEMMRERFAKLLLGEDMSGSGKGV 117
Query: 134 CTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSES---- 189
CTAVT+SN+ITNLYATVFGQ+LRL PL EKK LWKREM+C +S+CDYIVE + S
Sbjct: 118 CTAVTVSNSITNLYATVFGQSLRLQPLSTEKKDLWKREMNCFMSICDYIVEVIPRSLGTN 177
Query: 190 -----QNLRDG--------REVE----DILESFQDTEFWYAEQGXXXXXXXX----XXXX 228
LR R+++ +IL+SF + EFWY E+G
Sbjct: 178 VEITETKLRSDILMSLPALRKLDNMLMEILDSFTENEFWYVERGSSSMNSGGGGRDSGTF 237
Query: 229 XXVIVQRKEEKWWLPVPCVPPGGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIP 288
V+VQRK+EKWWLPVPCVP GLSE+ RKHLRHKRDCA+QIHKAA+AIN + L +M+IP
Sbjct: 238 RKVVVQRKDEKWWLPVPCVPAEGLSEEERKHLRHKRDCASQIHKAALAINDSTLNDMDIP 297
Query: 289 DSYMANLPKSGKACLGDFIYRYMYTTEKFSPDHLLDCLSIASEHEALELADHVEASMYTW 348
DSY+ LPKSGKA +GD IY+ + T EKF PD LLD L I SEHEALELAD VEAS+ TW
Sbjct: 298 DSYLTTLPKSGKASVGDVIYKQLCTAEKFYPDQLLDILKITSEHEALELADKVEASLVTW 357
Query: 349 RRKAC-MSHSKSSWDMVKDLMSETDR-SDKNHLLAARAESLLFYLKQRYPELAQTSLDTC 406
RRK ++HSKSSWDM+KD+ + DR +DKNH+LAARA SLLF LKQRYPEL+QTSLD C
Sbjct: 358 RRKTGGLTHSKSSWDMMKDISGDADRGNDKNHILAARARSLLFCLKQRYPELSQTSLDIC 417
Query: 407 KIQCNQDVGQAVLESYSRVLEGLAFNTVAWVEDVLFVDRSVRNQD 451
KIQ N+DVG+AVLESYSRVLEGLA+N V+W++DVL+VDR+VRN+D
Sbjct: 418 KIQFNRDVGKAVLESYSRVLEGLAYNVVSWIDDVLYVDRTVRNRD 462
>TAIR|locus:2185153 [details] [associations]
symbol:ROPGEF7 "ROP (rho of plants) guanine nucleotide
exchange factor 7" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005089 EMBL:AL162508
HOGENOM:HOG000238290 EMBL:BT015831 EMBL:BT020213 IPI:IPI00547496
PIR:T48222 RefSeq:NP_195821.1 UniGene:At.50417
ProteinModelPortal:Q9LZN0 SMR:Q9LZN0 DIP:DIP-59396N PaxDb:Q9LZN0
PRIDE:Q9LZN0 EnsemblPlants:AT5G02010.1 GeneID:831858
KEGG:ath:AT5G02010 TAIR:At5g02010 eggNOG:NOG294244
InParanoid:Q9LZN0 OMA:PTWQTFP PhylomeDB:Q9LZN0
ProtClustDB:CLSN2916745 Genevestigator:Q9LZN0 Uniprot:Q9LZN0
Length = 546
Score = 729 (261.7 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 142/258 (55%), Positives = 193/258 (74%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXX-VIVQRKEEKWWLPVPCVPPGGLSEKSRK 258
+IL+SF++TEFWY +QG QR+E+KWWLPVP V PGGL E SRK
Sbjct: 186 EILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDKWWLPVPRVSPGGLQENSRK 245
Query: 259 HLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFS 318
L+HKRDC NQI KAAMAINS LA+MEIP+SY+ +LP+ G++CLGD IYRY+ ++++FS
Sbjct: 246 QLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKGRSCLGDLIYRYI-SSDQFS 304
Query: 319 PDHLLDCLSIASEHEALELADHVEASMYTWRRKACM---SHSKSSWDMVKDLMSETDRSD 375
P+ LLDCL ++SEH+A+E+A+ VE+S+Y W ++ +++K+SW+MVK+LM + +D
Sbjct: 305 PECLLDCLDLSSEHQAIEIANRVESSIYLWHKRTNSKPATNTKTSWEMVKELMVD---AD 361
Query: 376 KNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVA 435
K L+A RAESLL LKQR+P L QT+LD KIQ N+D+G+++LESYSRVLE LAFN VA
Sbjct: 362 KLELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNKDIGKSILESYSRVLESLAFNIVA 421
Query: 436 WVEDVLFVDRSVRNQ-DQ 452
++D+LFVD R+ DQ
Sbjct: 422 RIDDLLFVDDLTRHSSDQ 439
Score = 294 (108.6 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 98 KNLDDQ------ESMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVF 151
KN+D + +S E+E+MKERF+KLLLGEDMSGSG GVCTA+ ISNAITNL AT+F
Sbjct: 53 KNIDGEKKKIRSDSRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLF 112
Query: 152 GQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSESQNLRDGREVE 199
GQ RL PL EKK +W+REM+ LL V D+IVE Q DG ++E
Sbjct: 113 GQLWRLEPLPTEKKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLE 160
>TAIR|locus:2153684 [details] [associations]
symbol:ROPGEF5 "ROP (rho of plants) guanine nucleotide
exchange factor 5" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002688 GO:GO:0005089 IPI:IPI00529677
RefSeq:NP_196213.2 UniGene:At.50436 ProteinModelPortal:F4K295
SMR:F4K295 EnsemblPlants:AT5G05940.1 GeneID:830479
KEGG:ath:AT5G05940 OMA:DSKPKIC Uniprot:F4K295
Length = 611
Score = 673 (242.0 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 137/262 (52%), Positives = 182/262 (69%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRKH 259
DIL SF+ TEFWY +QG I QR+EEKWWLPVP + P GL+E++R
Sbjct: 218 DILASFKKTEFWYVDQGIVASENDGSASFRRKI-QRQEEKWWLPVPRLAPNGLTEEARTE 276
Query: 260 LRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFSP 319
L HKR+CA QI KAAMAINS L EM++P SY+ LPK+G++CLGD IYRY+ T++KFS
Sbjct: 277 LNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYV-TSDKFSA 335
Query: 320 DHLLDCLSIASEHEALELADHVEASMYTWRR----KACMSHSKSS------WDMVKDLMS 369
+ LLDCL ++SEH AL++A+ VEAS+Y WRR K ++++ SS W+MVK+LM+
Sbjct: 336 ESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMA 395
Query: 370 ETDRSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGL 429
DK LL R+E+LL LKQR+P L QTSLD KIQ N+D+G+++LESYSR LE L
Sbjct: 396 A---GDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESL 452
Query: 430 AFNTVAWVEDVLFVDRSVRNQD 451
A N +A ++D+L+VD + D
Sbjct: 453 ASNIIARIDDLLYVDDLTKQSD 474
Score = 313 (115.2 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 74/174 (42%), Positives = 98/174 (56%)
Query: 33 TPVYSTMSADSFAYHRTNSETSAFSDPIDDNSSCSEPSPSN---WLVSRSGQPALGRPEM 89
TP + +S T+ + S SS P PS W + ++ + +
Sbjct: 19 TPSMEDILTESKERSSTSGASYESSSTTTVASSSPPPPPSQILGWPIRKASFRKNSKESV 78
Query: 90 R--QQKTVV--DKNLDDQESMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITN 145
+K + D +E ++E+MKERFAKLLLGEDMSGSGKGVCTA+ ISNAITN
Sbjct: 79 NFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITN 138
Query: 146 LYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSESQNLRDGREVE 199
L AT+FGQ RL PL EKK +W+REM+ +LSV D+IVE +Q DG + E
Sbjct: 139 LCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFE 192
Score = 39 (18.8 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 371 TDRSDKNHLLAARAESLLFYLKQRYP 396
T +SD N+LL++ A S + K+ P
Sbjct: 470 TKQSDDNNLLSSPAVSSIIAHKKVVP 495
>TAIR|locus:2121828 [details] [associations]
symbol:ROPGEF1 "ROP (rho of plants) guanine nucleotide
exchange factor 1" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009860 "pollen tube
growth" evidence=IMP] [GO:0016324 "apical plasma membrane"
evidence=IDA] [GO:0000271 "polysaccharide biosynthetic process"
evidence=RCA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0008356 "asymmetric cell division" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009926 "auxin
polar transport" evidence=RCA] [GO:0009932 "cell tip growth"
evidence=RCA] [GO:0010015 "root morphogenesis" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010817 "regulation of hormone levels" evidence=RCA]
[GO:0040007 "growth" evidence=RCA] [GO:0043481 "anthocyanin
accumulation in tissues in response to UV light" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0071555 "cell
wall organization" evidence=RCA] [GO:0080092 "regulation of pollen
tube growth" evidence=IGI] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016324 GO:GO:0009860 GO:GO:0005089 EMBL:AL161593
GO:GO:0080092 EMBL:AL035539 EMBL:AY056193 EMBL:AY056375
EMBL:AY133649 EMBL:BT000462 EMBL:BT000975 EMBL:AY084995
IPI:IPI00542345 PIR:T05671 RefSeq:NP_195556.1 UniGene:At.2769
ProteinModelPortal:Q93ZY2 SMR:Q93ZY2 DIP:DIP-59393N IntAct:Q93ZY2
STRING:Q93ZY2 PRIDE:Q93ZY2 EnsemblPlants:AT4G38430.1 GeneID:830000
KEGG:ath:AT4G38430 TAIR:At4g38430 eggNOG:NOG263269
HOGENOM:HOG000238290 InParanoid:Q93ZY2 OMA:IEAAVHV PhylomeDB:Q93ZY2
ProtClustDB:CLSN2685422 Genevestigator:Q93ZY2 GermOnline:AT4G38430
Uniprot:Q93ZY2
Length = 548
Score = 658 (236.7 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 134/256 (52%), Positives = 180/256 (70%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRKH 259
D+L++F DTEFWY ++G V R+E+KWWLP P VPP GLSE++RK
Sbjct: 206 DMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASV-RQEDKWWLPCPKVPPNGLSEEARKK 264
Query: 260 LRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFSP 319
L+ RD ANQI KAA+AINS +LAEMEIPD Y+ LPKSGK CLG+ IY+Y+ T KFSP
Sbjct: 265 LQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYL-TANKFSP 323
Query: 320 DHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSK------SSWD-MVKDLMSETD 372
+ LLDCL ++SEH+ LE+A+ +EA+++ WR+K H K SSW VK L+++ +
Sbjct: 324 ECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNE 383
Query: 373 RSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFN 432
R+D L RAE+LL L+ R+P L QT+LD KIQ N+DVGQ++LESYSRV+E +AFN
Sbjct: 384 RND---FLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESMAFN 440
Query: 433 TVAWVEDVLFVDRSVR 448
A ++DVL+VD ++R
Sbjct: 441 ITARIDDVLYVDDAMR 456
Score = 319 (117.4 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 86/188 (45%), Positives = 111/188 (59%)
Query: 21 SIDQNDQTSTSETPVYSTMSADSFAYHRTNSETSAFSDPID-DNSSCSEPSPSNWLVSRS 79
S +++D+ S+ YS SAD + S +S D + +S S PS + R
Sbjct: 5 SSEEDDEVSSERCGSYSP-SAD---ISESESSSSFSCHRFDGEGASSSIPSSPRVVAGRG 60
Query: 80 GQ-PA-LGRPEMRQQKTVVDKNLDDQESMDL-ELELMKERFAKLLLGEDMSGSGKGVCTA 136
PA + P + + V D D Q DL E+E+MKERFAKLLLGEDMSG GKGVCTA
Sbjct: 61 FYFPAPVMLPVIGGKDVVWD---DKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTA 117
Query: 137 VTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSESQNLRDGR 196
+ ISNAITNL ATVFG+ RL PL P+KKA+W+RE++ LL V D IVE + Q G
Sbjct: 118 LAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGG 177
Query: 197 EVEDILES 204
E I+E+
Sbjct: 178 TYE-IMET 184
>TAIR|locus:2078976 [details] [associations]
symbol:ROPGEF6 "ROP (rho of plants) guanine nucleotide
exchange factor 6" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005089 EMBL:AL161667 HOGENOM:HOG000238290 EMBL:BT020279
EMBL:BT021117 IPI:IPI00546656 PIR:T47705 RefSeq:NP_191125.1
UniGene:At.50282 ProteinModelPortal:Q9M056 SMR:Q9M056 STRING:Q9M056
EnsemblPlants:AT3G55660.1 GeneID:824732 KEGG:ath:AT3G55660
TAIR:At3g55660 eggNOG:NOG267745 InParanoid:Q9M056 OMA:GRNIRER
PhylomeDB:Q9M056 ProtClustDB:CLSN2913345 Genevestigator:Q9M056
Uniprot:Q9M056
Length = 579
Score = 616 (221.9 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 127/253 (50%), Positives = 171/253 (67%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRKH 259
+IL+SF +TEFWY +QG + +KWWLP+P VP GL+E++RK
Sbjct: 223 EILDSFGETEFWYVDQGIVAAESARSNSF-----REDGDKWWLPLPRVPSDGLTEQTRKK 277
Query: 260 LRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFSP 319
L H R+ NQI KA M+INS LAEME+P SY+ LPK+G++CLGDF+YR + T++ FS
Sbjct: 278 LDHTREFTNQILKACMSINSIALAEMEVPQSYLEALPKNGRSCLGDFLYRNI-TSDNFSA 336
Query: 320 DHLLDCLSIASEHEALELADHVEASMYTWRRKACMSH------SKSS-WDM-VKDLMSET 371
DHLL+ + ++SE +E+A+ VEASMY WRR+A H S S+ W M VK++M
Sbjct: 337 DHLLESIDLSSELAVVEMANRVEASMYVWRRRAHSRHLISLYRSTSTRWGMIVKEMMMHQ 396
Query: 372 DRSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAF 431
DK + A RAESLL LKQR+P L QT+LDT KIQ N+DVG+++LESYSRVLE LA+
Sbjct: 397 TDGDKREIFAERAESLLIRLKQRFPGLRQTALDTSKIQYNKDVGKSILESYSRVLESLAY 456
Query: 432 NTVAWVEDVLFVD 444
+ +E+VLF+D
Sbjct: 457 SIGVRIEEVLFMD 469
Score = 308 (113.5 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 71/175 (40%), Positives = 105/175 (60%)
Query: 29 STSETPVYSTMSADSFAYHRTNSETSAFSDPIDDNSSCSEPSPSN---WLVSR-SGQPAL 84
S +E+ S++S+ S ++ +S + + S S P+ S W + + S + +
Sbjct: 28 SVTESTTDSSLSSSSSGVGSSSGRSS-----VAERSVSSPPTKSQILGWPLGQGSWRKSS 82
Query: 85 GRPEMRQQKTVVDKNLDDQESMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAIT 144
G+ + + + D + E+EL+KER AKLLLGEDMSGSG+GVC A+ ISNAIT
Sbjct: 83 GKMKKKTPTKIDDFGFKRVGTETSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAIT 142
Query: 145 NLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSESQNLRDGREVE 199
NLYA + GQ RL P+ EKK +W+RE++ LLSV D+IVE V QN +G ++E
Sbjct: 143 NLYAAILGQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIE 197
>TAIR|locus:2091742 [details] [associations]
symbol:ROPGEF8 "ROP (rho of plants) guanine nucleotide
exchange factor 8" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005089 EMBL:AB020746
PDB:2WBL PDBsum:2WBL PDB:2NTY PDBsum:2NTY HOGENOM:HOG000238290
EMBL:DQ446693 IPI:IPI00534717 RefSeq:NP_189105.1 UniGene:At.53476
PDB:2NTX PDBsum:2NTX ProteinModelPortal:Q9LV40 SMR:Q9LV40
MINT:MINT-6803377 STRING:Q9LV40 PaxDb:Q9LV40 PRIDE:Q9LV40
EnsemblPlants:AT3G24620.1 GeneID:822058 KEGG:ath:AT3G24620
TAIR:At3g24620 eggNOG:NOG300850 InParanoid:Q9LV40 OMA:MAINADV
PhylomeDB:Q9LV40 ProtClustDB:CLSN2684515 EvolutionaryTrace:Q9LV40
Genevestigator:Q9LV40 Uniprot:Q9LV40
Length = 523
Score = 529 (191.3 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 112/246 (45%), Positives = 155/246 (63%)
Query: 200 DILESFQD-TEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRK 258
D L++F+ EFWY + R +KWWLP VPPGGLSE SR+
Sbjct: 201 DTLDNFRGHNEFWYVSRDSEEGQQARN--------DRTNDKWWLPPVKVPPGGLSEPSRR 252
Query: 259 HLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFS 318
L ++D Q+ KAAMAIN+ +L+EMEIP+SY+ +LPK+G+A LGD IY+ + T E F
Sbjct: 253 MLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSI-TEEWFD 311
Query: 319 PDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKNH 378
P+ L L +++EH+ L+L + +EAS+ W+RK +KSSW L +K
Sbjct: 312 PEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSL-------EKRE 364
Query: 379 LLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWVE 438
L RAE++L LKQ++P L Q+SLD KIQ N+DVGQAVLESYSR+LE LA+ ++ +E
Sbjct: 365 LFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIE 424
Query: 439 DVLFVD 444
DVL+ D
Sbjct: 425 DVLYTD 430
Score = 279 (103.3 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 52/92 (56%), Positives = 71/92 (77%)
Query: 104 ESMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPE 163
E ++E+MK+RFAKLLLGEDMSG GKGV +A+ +SNAITNL A++FG+ +L P+ +
Sbjct: 80 ERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQD 139
Query: 164 KKALWKREMDCLLSVCDYIVEFVSESQNLRDG 195
++A WK+E+D LLSV D+IVEFV Q +DG
Sbjct: 140 RQARWKKEIDWLLSVTDHIVEFVPSQQTSKDG 171
>TAIR|locus:2119320 [details] [associations]
symbol:ROPGEF9 "ROP (rho of plants) guanine nucleotide
exchange factor 9" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0048610 "cellular process involved in reproduction"
evidence=RCA] [GO:0048868 "pollen tube development" evidence=RCA]
[GO:0080092 "regulation of pollen tube growth" evidence=IGI]
InterPro:IPR005512 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002687
GO:GO:0005089 GO:GO:0080092 EMBL:AL049751 EMBL:AL161535
ProtClustDB:CLSN2684515 EMBL:DQ446830 IPI:IPI00524431 PIR:T07704
RefSeq:NP_193060.1 UniGene:At.54299 ProteinModelPortal:Q9SVQ3
SMR:Q9SVQ3 PRIDE:Q9SVQ3 EnsemblPlants:AT4G13240.1 GeneID:826941
KEGG:ath:AT4G13240 TAIR:At4g13240 InParanoid:Q9SVQ3 OMA:HAVLESY
PhylomeDB:Q9SVQ3 ArrayExpress:Q9SVQ3 Genevestigator:Q9SVQ3
Uniprot:Q9SVQ3
Length = 517
Score = 517 (187.1 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 106/252 (42%), Positives = 156/252 (61%)
Query: 200 DILESFQD-TEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRK 258
D L++F+ EFWY + +R ++KWWLP VPP GLSE +R+
Sbjct: 190 DTLDNFRGHNEFWYVSRDSEEGKQARN--------ERTKDKWWLPPVKVPPNGLSESARR 241
Query: 259 HLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFS 318
L ++D +Q+ KAAMAIN+ +L+EM IPDSY+ +LPK+G+ LGD +Y+ + T E F
Sbjct: 242 MLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIESLPKNGRVSLGDSLYKSI-TEEWFD 300
Query: 319 PDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKNH 378
P+ L L +++EH+ L++ + +EAS+ W+RK + +KSSW L +K
Sbjct: 301 PEQFLSTLDLSTEHKVLDVKNRIEASIVIWKRKLHLKDNKSSWGSAVSL-------EKRE 353
Query: 379 LLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWVE 438
L RAE++L LKQ++P L Q+SLD KIQ N+DVG AVLESYSR+LE L + ++ ++
Sbjct: 354 LFEERAETILVLLKQKFPGLPQSSLDISKIQYNKDVGHAVLESYSRILESLGYTEMSRID 413
Query: 439 DVLFVDRSVRNQ 450
DVL+ D R Q
Sbjct: 414 DVLYADSLARKQ 425
Score = 286 (105.7 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 51 SETSAFS-DPIDDNSSCSE---PSPSNWLVSRSG-QPALGRPEMRQQKTVVDKNLDD-QE 104
S TS+F+ D + D+S E P + + S Q +LG + + + + + Q+
Sbjct: 10 SITSSFNLDRMFDSSPGKEQQQPHLAETTMPESQTQDSLGGSPVETSRPMTSRLISRRQD 69
Query: 105 SMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEK 164
E E+MK+RF KLLLGEDMSG GKGV +A+ +SNAITNL A++FG+ +L P+ P++
Sbjct: 70 KQQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMAPDR 129
Query: 165 KALWKREMDCLLSVCDYIVEFVSESQNLRDG 195
+A WK+E+D LLSV D+IVEFV Q ++G
Sbjct: 130 RARWKKEIDWLLSVTDHIVEFVPSQQISKEG 160
>TAIR|locus:2017844 [details] [associations]
symbol:ROPGEF12 "ROP (rho of plants) guanine nucleotide
exchange factor 12" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009860 "pollen tube growth"
evidence=IEP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0080092
"regulation of pollen tube growth" evidence=IGI] InterPro:IPR005512
Pfam:PF03759 PROSITE:PS51334 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009793 GO:GO:0009860
GO:GO:0005089 EMBL:AC011717 GO:GO:0080092 GO:GO:0090406
HOGENOM:HOG000238290 EMBL:BT033042 IPI:IPI00519583 PIR:F96829
RefSeq:NP_178104.1 UniGene:At.50054 ProteinModelPortal:Q9CA89
SMR:Q9CA89 DIP:DIP-46186N STRING:Q9CA89 PaxDb:Q9CA89 PRIDE:Q9CA89
EnsemblPlants:AT1G79860.1 GeneID:844325 KEGG:ath:AT1G79860
TAIR:At1g79860 eggNOG:NOG256984 InParanoid:Q9CA89 OMA:INANILM
PhylomeDB:Q9CA89 ProtClustDB:CLSN2681866 Genevestigator:Q9CA89
Uniprot:Q9CA89
Length = 515
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 174/441 (39%), Positives = 257/441 (58%)
Query: 23 DQNDQTSTSETPVYSTMSADSFAYHRTNSETSAFSDPIDDNSSCSEPSPSNWLVSRSGQP 82
+Q +T S + + D+ + R N S + +D+ ++ S + ++ S P
Sbjct: 6 EQEQETYRSRLFNFKWRNNDNNSATRHNKSLSVETG-LDEAATGSHDAEPLTIIHPSQGP 64
Query: 83 ALGRPEMRQQKTVVDKNLDDQESMDL-ELELMKERFAKLLLGEDMSGSGKGVCTAVTISN 141
L R + +E L ++E MKERF+KLLLGED SG GKGV +A+ +SN
Sbjct: 65 PLSRSAADEAVLAALAASQARERQLLADMEQMKERFSKLLLGEDNSGGGKGVSSALALSN 124
Query: 142 AITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVEFVSESQNLRDGREVEDI 201
AITNL A+VFG+ RL P+ E++A W++E+D LLSV DY+VEF Q +DG +E I
Sbjct: 125 AITNLAASVFGEQRRLEPMPAERRARWRKEIDWLLSVTDYVVEFAPSQQKNKDGTNME-I 183
Query: 202 LESFQDTEFWY---------------AEQGXXXXXXXXXXXXXXVIV-QRKEEKWWLPVP 245
+ + Q T+ E + +R +EKWW+P
Sbjct: 184 MTTRQRTDLHMNIPALKKLDAMLIDCLENFKDQSEFSYISKDSPDLDGKRNDEKWWIPTV 243
Query: 246 CVPPGGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGD 305
VPP GLSE SR+ L++++DC NQ+ KAAMAIN+ +L EMEIP+SY+ +LPK+G+A LGD
Sbjct: 244 KVPPDGLSEASRRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGD 303
Query: 306 FIYRYMYTTEKFSPDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVK 365
+Y+ + T + F PD L + ++SEH+ ++L + +EAS+ W+RK +KSS
Sbjct: 304 QMYKNI-TVDFFDPDQFLSSMDMSSEHKIVDLKNRIEASIIIWKRKMVYKDNKSSAPWAS 362
Query: 366 DLMSETDRSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRV 425
+ E K + RAE++L LKQRYP ++Q+SLD KIQ N+DVGQAVLESYSR+
Sbjct: 363 GVSLE-----KREVFEERAETILLILKQRYPGISQSSLDISKIQFNEDVGQAVLESYSRI 417
Query: 426 LEGLAFNTVAWVEDVLFVDRS 446
LE LA+ ++ ++DVL DR+
Sbjct: 418 LESLAYTVLSRIDDVLEADRA 438
>TAIR|locus:2180781 [details] [associations]
symbol:ROPGEF10 "ROP (rho of plants) guanine nucleotide
exchange factor 10" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002688 GO:GO:0005089 EMBL:DQ459196
IPI:IPI00518311 RefSeq:NP_197457.1 UniGene:At.54917
ProteinModelPortal:Q1KS66 SMR:Q1KS66 DIP:DIP-59397N
EnsemblPlants:AT5G19560.1 GeneID:832076 KEGG:ath:AT5G19560
TAIR:At5g19560 OMA:HTPEHEL PhylomeDB:Q1KS66 ArrayExpress:Q1KS66
Genevestigator:Q3E7S8 Uniprot:Q1KS66
Length = 493
Score = 510 (184.6 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 107/254 (42%), Positives = 159/254 (62%)
Query: 200 DILESFQDT-EFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRK 258
+ L++F+D +FWY + R++E WWLPV VP GLSE+SR+
Sbjct: 160 ETLDNFKDQKDFWYVPRDMEDADHNGDW--------RRDENWWLPVVKVPTDGLSEESRR 211
Query: 259 HLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFS 318
L++++D Q+ KAA AIN+ +L+EM +P++Y+ +LPK+GK LGDF+Y+ + T E F
Sbjct: 212 WLQNQKDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSI-TEESFD 270
Query: 319 PDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHS--KSSWDMVKDLMSETDRSDK 376
PD+ + L +++EH+ L+L + +EASM W+RK C KS W L +K
Sbjct: 271 PDYFVSFLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQWGSTVSL-------EK 323
Query: 377 NHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAW 436
L RAE++L LKQ++P + Q+SL+ KI+ N+DVGQA+LESYSRVLE LA ++
Sbjct: 324 RELFEVRAETILVMLKQQFPGIPQSSLEVSKIKNNKDVGQAILESYSRVLESLASKIMSR 383
Query: 437 VEDVLFVDRSVRNQ 450
+EDVL DR V+ Q
Sbjct: 384 IEDVLEADRLVQRQ 397
Score = 246 (91.7 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 49/99 (49%), Positives = 71/99 (71%)
Query: 109 ELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALW 168
++E+MKERFAKLLLGEDMSG G G +A+ +SNAIT L ++FG+ ++L P+ PE K W
Sbjct: 44 DMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKENW 103
Query: 169 KREMDCLLSVCDYIVEFVSESQNLRDGREVEDILESFQD 207
++EM LLSV D+IV+FV Q ++G+ E ++ +D
Sbjct: 104 RKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVTKQRD 142
>TAIR|locus:2018169 [details] [associations]
symbol:ROPGEF11 "ROP (rho of plants) guanine nucleotide
exchange factor 11" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0007017 "microtubule-based
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0080147 "root hair
cell development" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] InterPro:IPR001372 InterPro:IPR005512
Pfam:PF01221 Pfam:PF03759 PROSITE:PS51334 EMBL:CP002684
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 GO:GO:0005089
GO:GO:0007017 GO:GO:0080147 Gene3D:3.30.740.10 SUPFAM:SSF54648
KO:K10418 UniGene:At.25110 IPI:IPI00517707 RefSeq:NP_175634.5
UniGene:At.16831 ProteinModelPortal:F4ICV0 SMR:F4ICV0 PRIDE:F4ICV0
EnsemblPlants:AT1G52240.1 GeneID:841654 KEGG:ath:AT1G52240
OMA:NENSASR ArrayExpress:F4ICV0 Uniprot:F4ICV0
Length = 607
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 171/413 (41%), Positives = 238/413 (57%)
Query: 57 SDPIDDNSSC-----SEPSPSNWLVSRSGQPALGRPEMRQQKTVVDKNLDDQESMDL--- 108
SD +DD+ + S+P V R P G R K + D E++ +
Sbjct: 109 SDNLDDDDNDMMMFRSQPGKCG-SVDRPSLPIGGVTPNRNDKLPRVSSSDSMEALIILQA 167
Query: 109 ELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALW 168
+E MKE+F+KLLLGEDMSG GKGV +A+ +SNAITNL A+ FG+ RL P+ ++K W
Sbjct: 168 AMEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRW 227
Query: 169 KREMDCLLSVCDYIVEFVSESQNLRDGREVEDILESFQDTEFWYAEQGXXXXXXXXXXXX 228
+RE+ L+SV DYIVEF Q +DG +E ++ + Q T+
Sbjct: 228 RREIGWLISVADYIVEFAPTQQTNKDGTSME-VMSTRQRTDLLCNIPALKKLDAMLLDCL 286
Query: 229 XXVIVQ----------------RKEEKWWLPVPCVPPGGLSEKSRKHLRHKRDCANQIHK 272
Q R +EKWWLP VPP GLSE SR+ L+ +++C NQ+ K
Sbjct: 287 DKFKDQDEFYYVKKDSPDSCETRNDEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQVLK 346
Query: 273 AAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFSPDHLLDCLSIASEH 332
AAMAIN+ +L+EMEIP+SY+ +LPK+G+A LGD IYR M T E F D L + ++SEH
Sbjct: 347 AAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYR-MITVEMFDADQFLIEMDLSSEH 405
Query: 333 EALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKNHLLAARAESLLFYLK 392
+ L+L + +EAS+ W+RK +KS W T +K RAE++L LK
Sbjct: 406 KILDLKNRIEASIVIWKRKMVQKDTKSPW-------GSTVSIEKREQFEERAETILLLLK 458
Query: 393 QRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWVEDVLFVDR 445
Q +P ++Q+SLD KIQ N+DVG A+LESYSRVLE LA ++ +EDVL+ D+
Sbjct: 459 QGFPGISQSSLDISKIQFNRDVGLAILESYSRVLESLAHTVMSRIEDVLYADQ 511
>TAIR|locus:2093467 [details] [associations]
symbol:ROPGEF13 "ROP (rho of plants) guanine nucleotide
exchange factor 13" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002686 GO:GO:0005089 UniGene:At.25110
UniGene:At.25220 UniGene:At.72250 IPI:IPI00526643
RefSeq:NP_188234.1 ProteinModelPortal:F4J1G1 SMR:F4J1G1
PRIDE:F4J1G1 EnsemblPlants:AT3G16130.1 GeneID:820858
KEGG:ath:AT3G16130 OMA:NSAMAIN ArrayExpress:F4J1G1 Uniprot:F4J1G1
Length = 576
Score = 474 (171.9 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 108/270 (40%), Positives = 159/270 (58%)
Query: 184 EFVSESQNLRDGREVE-DILESFQDT-EFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWW 241
+ VS +L+ E+ D L+ F+D EF+Y G R ++KWW
Sbjct: 227 DLVSNIPSLKKLDEMLLDCLDKFKDQDEFYYVTPGSPESENSNST--------RNDDKWW 278
Query: 242 LPVPCVPPGGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKA 301
LP+ VPP GLSE ++ L +R+C Q+ +AMAINS +L EMEIP+SY+ +LPK G+A
Sbjct: 279 LPIVKVPPKGLSETLKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLPKKGRA 338
Query: 302 CLGDFIYRYMYTTEKFSPDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSW 361
LGD IYR M T E F + L + ++SEH+ L+L + EAS+ W+RK +KSS
Sbjct: 339 SLGDMIYR-MITLEMFDAEQFLLEMDLSSEHKILDLKNKFEASVVIWQRKIVQIDNKSSS 397
Query: 362 DMVKDLMSETDRSDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLES 421
+L DK L RA ++L +KQ +P ++Q++LD KIQ N+D+G A++ES
Sbjct: 398 PWSTNLSM-----DKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFNRDIGLAIVES 452
Query: 422 YSRVLEGLAFNTVAWVEDVLFVDRSVRNQD 451
YSR+LE LA ++ +EDVL D+ +N +
Sbjct: 453 YSRILESLAHTVMSRIEDVLEADQLTQNPE 482
Score = 249 (92.7 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 53/101 (52%), Positives = 70/101 (69%)
Query: 109 ELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALW 168
ELE MK++FAKLLLGEDMSG KGV +A+ +SNAITNL A+ FG+ RL + +KK W
Sbjct: 128 ELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKERW 187
Query: 169 KREMDCLLSVCDYIVEFVSESQNLRDGREVEDILESFQDTE 209
+RE+ LLSV D+IVEF Q DG +E ++ + Q T+
Sbjct: 188 RREIGWLLSVTDHIVEFSPTHQTNEDGSSME-VMTTKQRTD 227
>TAIR|locus:2028701 [details] [associations]
symbol:ROPGEF14 "ROP (rho of plants) guanine nucleotide
exchange factor 14" species:3702 "Arabidopsis thaliana" [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0080092 "regulation of
pollen tube growth" evidence=IGI] InterPro:IPR005512 Pfam:PF03759
PROSITE:PS51334 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005089 GO:GO:0080092 HOGENOM:HOG000238290 EMBL:AK222010
IPI:IPI00548250 RefSeq:NP_174446.2 UniGene:At.40302
ProteinModelPortal:Q56WM6 SMR:Q56WM6 DIP:DIP-59398N PRIDE:Q56WM6
EnsemblPlants:AT1G31650.1 GeneID:840052 KEGG:ath:AT1G31650
TAIR:At1g31650 eggNOG:NOG282811 InParanoid:Q56WM6 OMA:HIRRSLM
PhylomeDB:Q56WM6 ProtClustDB:CLSN2680344 Genevestigator:Q56WM6
Uniprot:Q56WM6
Length = 576
Score = 397 (144.8 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 96/256 (37%), Positives = 137/256 (53%)
Query: 200 DILESFQDTEFWYAEQGXXXXXXXXXXXXXXVIVQRKEEKWWLPVPCVPPGGLSEKSRKH 259
+ L+S +TEFWY+E G + ++WWLP P VP GLS RK
Sbjct: 252 ETLDSMVNTEFWYSEIGSRAEGKNKSTS--------ESKRWWLPSPQVPKPGLSNSGRKK 303
Query: 260 LRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFSP 319
L K Q+ KA AIN IL EM +P +PKSGK LGD +Y+ M E +
Sbjct: 304 LLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYK-MLAVESATV 362
Query: 320 DHLLDCLSIASEHEALELADHVEASMYTWRRKACM--SHSKS----SWDMVKDLMSETDR 373
D + L++ +EH ALE + +E++M+ W+ + S+ KS SW KD +SE R
Sbjct: 363 DEIFISLNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRASWSFAKDPLSEIGR 422
Query: 374 SDKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNT 433
N L RAE+L +K ++P L + LD KIQ ++D+G AVLE+YSR L LAF
Sbjct: 423 ---NESLLNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRI 479
Query: 434 VAWVEDVLFVDRSVRN 449
++ + ++L D S+ N
Sbjct: 480 LSRMGEILKED-SLSN 494
Score = 248 (92.4 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 67/195 (34%), Positives = 109/195 (55%)
Query: 15 CRPSPSSIDQNDQTSTSETPVYSTMSADSFAYHRTNSE-TSAFSD---PI-DDNSSCSEP 69
C + S ++ TS + + ++ D+F+ ++ + +S+FS P+ +D SC
Sbjct: 38 CIINNQSYEEESGTSRGDGCLTDSLDDDAFSSCSSSKDASSSFSSKWLPMKNDEHSCDGL 97
Query: 70 SPSNWLVSRSGQPALGRPEMRQQKTVVDKNLDDQES-----MDLELELMKERFAKLLLGE 124
+ L RS E ++Q ++ D +E L++E MKE+F+KLLLGE
Sbjct: 98 N----LSGRSQH--FDAKEKKKQGYGSSQHFDAKEKPGYVYCHLDVEAMKEKFSKLLLGE 151
Query: 125 DMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVE 184
D++G KGV A+ +SNA+T+L ++FG+ +L PL EKK W+REMD LLS +Y++E
Sbjct: 152 DVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKWRREMDWLLSPTNYMIE 211
Query: 185 FVSESQNLRDGREVE 199
V QN +GR +E
Sbjct: 212 LVPSKQNDANGRSLE 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 452 438 0.00088 118 3 11 23 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 627 (67 KB)
Total size of DFA: 300 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.07u 0.25s 40.32t Elapsed: 00:00:02
Total cpu time: 40.08u 0.25s 40.33t Elapsed: 00:00:02
Start: Fri May 10 22:20:15 2013 End: Fri May 10 22:20:17 2013