Query 041621
Match_columns 452
No_of_seqs 87 out of 112
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 15:20:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041621.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041621hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ntx_A EMB|CAB41934.1, prone8; 100.0 4E-183 1E-187 1329.2 27.0 331 105-451 6-362 (365)
2 2dae_A KIAA0733 protein; mitog 72.7 1.9 6.4E-05 35.3 2.4 35 386-420 12-48 (75)
3 1wgl_A TOLL-interacting protei 59.9 6.4 0.00022 30.1 3.0 34 385-418 10-43 (59)
4 3o0y_A Lipoprotein; structural 46.6 1.3E+02 0.0045 31.8 11.2 140 250-407 232-390 (609)
5 2dhy_A CUE domain-containing p 44.3 15 0.00052 28.9 2.9 33 386-418 20-52 (67)
6 4h63_V Mediator of RNA polymer 38.8 56 0.0019 28.7 5.9 62 375-443 11-72 (135)
7 2oz8_A MLL7089 protein; struct 31.2 34 0.0012 32.9 3.6 50 108-157 62-125 (389)
8 2fym_A Enolase; RNA degradosom 25.0 62 0.0021 31.9 4.3 29 129-157 103-132 (431)
9 2qq6_A Mandelate racemase/muco 24.9 56 0.0019 31.6 3.9 27 132-158 87-114 (410)
10 4axd_A Inositol-pentakisphosph 21.3 53 0.0018 34.0 3.1 34 237-274 173-207 (456)
11 2ptz_A Enolase; lyase, glycoly 20.6 87 0.003 31.1 4.4 50 108-157 67-134 (432)
No 1
>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A
Probab=100.00 E-value=3.9e-183 Score=1329.17 Aligned_cols=331 Identities=50% Similarity=0.857 Sum_probs=281.9
Q ss_pred cchHHHHHHHHHHHHhhhccCCCCCCCchhhHHHHHHHHHHHHHhhhhccccccCCChhHHHhhhhhccccccccCeeEE
Q 041621 105 SMDLELELMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLAPLKPEKKALWKREMDCLLSVCDYIVE 184 (452)
Q Consensus 105 ~~~se~E~MKErFaKLLLGEDMSGggKGV~tALAiSNAITNL~AtVFGelwrLEPl~~ekK~~WrREmdwLLSV~D~IVE 184 (452)
...+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+||||||||||||||||||
T Consensus 6 ~~~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~IVE 85 (365)
T 2ntx_A 6 RQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVE 85 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCTTSSCCSCCHHHHHHHHHHHHHHHHHTTC-CCCCCCHHHHHHHHHHHHHHHGGGGGCEE
T ss_pred CCchHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHhhhhHHHHHHhhhhhccCCCChHHHHHHHHhcceeeeccceeEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccCCCcchh-------------------------HhhhccCC-CeeEeeeCCCCCCCCCCCCCcccccccccCc
Q 041621 185 FVSESQNLRDGREVE-------------------------DILESFQD-TEFWYAEQGSMSSNSTRSGSFRRVIVQRKEE 238 (452)
Q Consensus 185 lvPs~Q~~~dG~~~E-------------------------e~LDsf~~-tEFWYv~~g~~~~~~~~s~s~r~~~~~R~ee 238 (452)
|||++|++|||+++| |+||||+| ||||||++|+.. +.++ ..|||++
T Consensus 86 ~vPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsf~d~tEFWYv~~g~~~-------~~~~-~~~r~ee 157 (365)
T 2ntx_A 86 FVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEE-------GQQA-RNDRTND 157 (365)
T ss_dssp EEEC----------CCEEEEECHHHHTHHHHHHHHHHHHHHHHHGGGSCCCCEEC-------------------------
T ss_pred eccccccCCCCceEEEeeccccchhhcCcHHHHHHHHHHHHHHHhCCCCCeeEEecCCCCc-------cccC-Ccccccc
Confidence 999999999999999 99999999 999999999622 2233 7899999
Q ss_pred cccccCCcCCCCCCCHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhcCCCchHHHhhccccCccchhHHHHHhhccCCCCC
Q 041621 239 KWWLPVPCVPPGGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANLPKSGKACLGDFIYRYMYTTEKFS 318 (452)
Q Consensus 239 KWWLP~p~VP~~GLSe~~RK~L~~qrd~~nQIlKAAmAIN~~vL~EMeIPe~y~esLPKnGrasLGD~iYr~i~t~e~Fs 318 (452)
|||||+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+| |+|+||
T Consensus 158 KWWLP~p~VP~~GLSe~~RK~L~~qrd~~~QIlKAAmAIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~i-t~d~Fs 236 (365)
T 2ntx_A 158 KWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSI-TEEWFD 236 (365)
T ss_dssp ---CCCEECCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHSCSCHHHHHCHHHHHHH-TCSSCC
T ss_pred cccCCCCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhHhHhhcCCCcHHHHHhcccccccccHHHHHHHH-hhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hhhHhhhcCchhhhHHHhhhhhhHHHHHHHHHhhhccCCCcchhhhhhhhcccCcchhHHHHHHHHHHHHHHHHhhCCCC
Q 041621 319 PDHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSETDRSDKNHLLAARAESLLFYLKQRYPEL 398 (452)
Q Consensus 319 pe~lL~~ldLssEH~aLe~anRvEAsi~iWrrK~~~~~~kssW~~vk~l~~~~~~~dK~e~laeRAEtlL~~LKqRfPgL 398 (452)
|||||+||||+|||+|||+|||||||||+||||++.+++|+||+++++. |||++|++|||+||+|||||||||
T Consensus 237 pe~ll~~ldlssEH~~le~anRiEAsi~vWrrk~~~k~~kssW~~~~~~-------dK~~~l~eRAEtlL~~LKqRfPgl 309 (365)
T 2ntx_A 237 PEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSL-------EKRELFEERAETILVLLKQKFPGL 309 (365)
T ss_dssp HHHHHHTSCCCSHHHHHHHHHHHHHHHHHHHHC--------------CH-------HHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhccCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccch-------hHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999987643 899999999999999999999999
Q ss_pred CcchhhhhhhhhchhhHHHHHHHHHHHHHHhHHHHHHhhhhHHhhchhhhccC
Q 041621 399 AQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWVEDVLFVDRSVRNQD 451 (452)
Q Consensus 399 pQT~LD~sKIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~~~~~~~ 451 (452)
|||+||++||||||||||||||||||||||||||||+|||||||+|++++++.
T Consensus 310 pQTsLD~sKIQyNkDVG~aILESYSRvLesLAf~I~sRIdDvL~~D~~~~~~~ 362 (365)
T 2ntx_A 310 PQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQT 362 (365)
T ss_dssp CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc
Confidence 99999999999999999999999999999999999999999999999999864
No 2
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.65 E-value=1.9 Score=35.30 Aligned_cols=35 Identities=34% Similarity=0.599 Sum_probs=25.2
Q ss_pred HHHHHHHhhCCCCCcchhhhhhhh--hchhhHHHHHH
Q 041621 386 SLLFYLKQRYPELAQTSLDTCKIQ--CNQDVGQAVLE 420 (452)
Q Consensus 386 tlL~~LKqRfPgLpQT~LD~sKIQ--yNkDVG~aILE 420 (452)
.|+.-||||||.+|+...--+=.| +|.|---.+|.
T Consensus 12 qvfheLkQrFPEvPd~VVsqc~~qN~~Nl~aC~~~L~ 48 (75)
T 2dae_A 12 QVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLS 48 (75)
T ss_dssp HHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHHH
T ss_pred HHHHHHHHhcccCcHHHHHHHHHHhccCHHHHHHHHH
Confidence 368889999999999988755544 55555555553
No 3
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=59.94 E-value=6.4 Score=30.08 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=28.5
Q ss_pred HHHHHHHHhhCCCCCcchhhhhhhhhchhhHHHH
Q 041621 385 ESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAV 418 (452)
Q Consensus 385 EtlL~~LKqRfPgLpQT~LD~sKIQyNkDVG~aI 418 (452)
|.-+..|+.-||++.+..+-..=..+|.||..||
T Consensus 10 ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI 43 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAI 43 (59)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHH
Confidence 4567789999999999988888888888888776
No 4
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=46.64 E-value=1.3e+02 Score=31.77 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=69.6
Q ss_pred CCCCHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhcCCCchHHHhhc-cc----cCccch--hHHHHHhhc---cCCCCCh
Q 041621 250 GGLSEKSRKHLRHKRDCANQIHKAAMAINSTILAEMEIPDSYMANL-PK----SGKACL--GDFIYRYMY---TTEKFSP 319 (452)
Q Consensus 250 ~GLSe~~RK~L~~qrd~~nQIlKAAmAIN~~vL~EMeIPe~y~esL-PK----nGrasL--GD~iYr~i~---t~e~Fsp 319 (452)
.||++..++.|..+- ..||+..|+--+.==-.+++.| |+ .|=..| |+..|+++. |.-..+|
T Consensus 232 ~~l~~~~~~~l~~~a---------~~ai~~~v~PAy~~l~~~l~~l~p~a~~~~G~~~lP~G~~~Y~~~l~~~ttt~~t~ 302 (609)
T 3o0y_A 232 DSLTTEQKQSLITQV---------IAKVSQVVYPAYQSVEKASEQLLSEARSESGIWAQPKGSVYYQDAIKQLGDSELSP 302 (609)
T ss_dssp TTSCHHHHHHHHHHH---------HHHHHHTHHHHHHHHHHHHHHHTTTSBSCCSGGGSTTHHHHHHHHHHHHHCCCSCH
T ss_pred ccCCHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcchhcCCChHHHHHHHHHHhhCCCCCH
Confidence 469998888775442 2233333322222122333333 33 233334 999999873 4444678
Q ss_pred hhHhhhcCchhhhHHHhhhhhhHHHHHHHHHhhhccCCCcchhhhhhhhccc----Ccchh-HHHHHH----HHHHHHHH
Q 041621 320 DHLLDCLSIASEHEALELADHVEASMYTWRRKACMSHSKSSWDMVKDLMSET----DRSDK-NHLLAA----RAESLLFY 390 (452)
Q Consensus 320 e~lL~~ldLssEH~aLe~anRvEAsi~iWrrK~~~~~~kssW~~vk~l~~~~----~~~dK-~e~lae----RAEtlL~~ 390 (452)
|++.. -.++-..||.+.|..=.++..- ...+-...+.-|-.|. ...|- ++-+.+ .+..+-..
T Consensus 303 dEi~~--------~gl~ev~ri~~em~~i~~~~g~-~~g~~~~~~~~L~~dp~~~~~~~d~~~~~~l~~~~~~~~~~~~~ 373 (609)
T 3o0y_A 303 TQIHQ--------IGLDEVARISGVMNEILLAQGY-TKGTVGERMVALNEEPRFLYEDSIAGREELLSDINGYITEVTAK 373 (609)
T ss_dssp HHHHH--------HHHHHHHHHHHHHHHHHHHTTC-CSSCHHHHHHHHHTSGGGCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--------HHHHHHHHHHHHHHHHHHHhCC-CCCCHHHHHHHHhcCccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 77743 4466777888887654444321 1112233333222220 00111 222323 33344445
Q ss_pred HHhhCCCCCcchhhhhh
Q 041621 391 LKQRYPELAQTSLDTCK 407 (452)
Q Consensus 391 LKqRfPgLpQT~LD~sK 407 (452)
|.+-||-||.+.+.+..
T Consensus 374 l~~~F~~lP~~~~~V~~ 390 (609)
T 3o0y_A 374 MAPVFRTTPSYQVEVKS 390 (609)
T ss_dssp TGGGCCCCCSCCCEEEE
T ss_pred HHHHhccCCCCCCeEEE
Confidence 56779999987665543
No 5
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.26 E-value=15 Score=28.87 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=26.7
Q ss_pred HHHHHHHhhCCCCCcchhhhhhhhhchhhHHHH
Q 041621 386 SLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAV 418 (452)
Q Consensus 386 tlL~~LKqRfPgLpQT~LD~sKIQyNkDVG~aI 418 (452)
..+..||+-||.+....+...=..+|.||..||
T Consensus 20 ~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aI 52 (67)
T 2dhy_A 20 QAMDDFKTMFPNMDYDIIECVLRANSGAVDATI 52 (67)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHH
Confidence 456679999999998888777777788887776
No 6
>4h63_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; 3.40A {Schizosaccharomyces pombe}
Probab=38.77 E-value=56 Score=28.68 Aligned_cols=62 Identities=21% Similarity=0.259 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhchhhHHHHHHHHHHHHHHhHHHHHHhhhhHHhh
Q 041621 375 DKNHLLAARAESLLFYLKQRYPELAQTSLDTCKIQCNQDVGQAVLESYSRVLEGLAFNTVAWVEDVLFV 443 (452)
Q Consensus 375 dK~e~laeRAEtlL~~LKqRfPgLpQT~LD~sKIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~ 443 (452)
.|-+.|-.|..+....|-++|- .-+..++|| |+|-+.+..|+|. ++.-|-+|+.-++|+|-.
T Consensus 11 ~k~~~l~~rid~~v~~ll~~f~----~iv~lA~v~-~~~~~~~A~e~~~--~~~~~~~~vra~e~LL~L 72 (135)
T 4h63_V 11 QRTNTLNSSIDNATLTILSRFQ----DILDIAINE-GKDKYTVAPEVYQ--IECHTVSMVRAVEQLLDV 72 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCT-TCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhcC-CCcHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 3566788888888888888884 456778888 8899999999997 788888999999999864
No 7
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=31.25 E-value=34 Score=32.89 Aligned_cols=50 Identities=16% Similarity=0.057 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhhhccC-------CCCCCCc------hhhHHHHHHHHHHHHHhhhhc-cccc
Q 041621 108 LELELMKERFAKLLLGED-------MSGSGKG------VCTAVTISNAITNLYATVFGQ-NLRL 157 (452)
Q Consensus 108 se~E~MKErFaKLLLGED-------MSGggKG------V~tALAiSNAITNL~AtVFGe-lwrL 157 (452)
+-...+++.++.+|.|.| +-+++.| .+...||..|+-.|.+-..|. +|+|
T Consensus 62 ~~~~~i~~~l~p~l~G~d~~~~~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~l 125 (389)
T 2oz8_A 62 EIESVFEHEVWPSLKGNRAIALVHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVL 125 (389)
T ss_dssp HHHHHHHHHTHHHHTTSCHHHHTTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 345567777999999998 4334444 467789999999999998887 6665
No 8
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=25.03 E-value=62 Score=31.85 Aligned_cols=29 Identities=21% Similarity=0.068 Sum_probs=23.7
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhhc-cccc
Q 041621 129 SGKGVCTAVTISNAITNLYATVFGQ-NLRL 157 (452)
Q Consensus 129 ggKGV~tALAiSNAITNL~AtVFGe-lwrL 157 (452)
++.|..+..||+.|+-.+.|-..|. +|+|
T Consensus 103 ~~~g~~A~~avd~AlwD~~ak~~g~Pl~~l 132 (431)
T 2fym_A 103 SKFGANAILAVSLANAKAAAAAKGMPLYEH 132 (431)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 4556688899999999999998887 5654
No 9
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=24.87 E-value=56 Score=31.57 Aligned_cols=27 Identities=22% Similarity=0.214 Sum_probs=22.2
Q ss_pred chhhHHHHHHHHHHHHHhhhhc-ccccc
Q 041621 132 GVCTAVTISNAITNLYATVFGQ-NLRLA 158 (452)
Q Consensus 132 GV~tALAiSNAITNL~AtVFGe-lwrLE 158 (452)
+.++..||+.|+-.|.|-..|. +|+|=
T Consensus 87 ~~~A~~aid~AlwDl~gk~~g~Pl~~lL 114 (410)
T 2qq6_A 87 VITALSGIETALWDLAGKLQGVPVYRLL 114 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGGT
T ss_pred HHHHHHHHHHHHHHHhHhHcCCcHHHHc
Confidence 3566789999999999999997 67663
No 10
>4axd_A Inositol-pentakisphosphate 2-kinase; transferase, inositol kinase, phytic acid, protein kinase, I signalling; HET: ANP CIT; 2.05A {Arabidopsis thaliana} PDB: 4axc_A 4aqk_A* 4axf_A* 4axe_A* 2xam_A* 2xal_A* 2xan_A* 2xao_A* 2xar_A* 3udz_A* 3udt_A* 3uds_A*
Probab=21.30 E-value=53 Score=33.98 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=24.9
Q ss_pred Cccc-cccCCcCCCCCCCHHHHHhhhhhhhhHHHHHHHH
Q 041621 237 EEKW-WLPVPCVPPGGLSEKSRKHLRHKRDCANQIHKAA 274 (452)
Q Consensus 237 eeKW-WLP~p~VP~~GLSe~~RK~L~~qrd~~nQIlKAA 274 (452)
-.|| |||.+. ++++...-+...+|=|+.|.+|++
T Consensus 173 KPKwGflp~s~----~i~~~~~~k~~~CRfCm~Q~~K~~ 207 (456)
T 4axd_A 173 KPKCGFLPTSR----FIGKENMLKTSVSRFKMHQLLKLE 207 (456)
T ss_dssp CCCCCSCCCST----TCCGGGGGGGTSCHHHHHHHHHHH
T ss_pred cccccccCCCC----CCCcccccccccCHHHHHHHHHhc
Confidence 3799 999865 233334455677999999999976
No 11
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=20.61 E-value=87 Score=31.11 Aligned_cols=50 Identities=22% Similarity=0.194 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhhhccCCC-----------------CCCCchhhHHHHHHHHHHHHHhhhhc-cccc
Q 041621 108 LELELMKERFAKLLLGEDMS-----------------GSGKGVCTAVTISNAITNLYATVFGQ-NLRL 157 (452)
Q Consensus 108 se~E~MKErFaKLLLGEDMS-----------------GggKGV~tALAiSNAITNL~AtVFGe-lwrL 157 (452)
.-++.+.+.++.+|+|.|.. +++.|..+.+||+.|+-.++|-..|. +|+|
T Consensus 67 ~av~~v~~~iap~LiG~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~l 134 (432)
T 2ptz_A 67 QAVKNVNEVIGPALIGRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRY 134 (432)
T ss_dssp HHHHHHHHTHHHHHTTCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 34555566666666666521 24455678899999999999998887 6664
Done!