Query 041627
Match_columns 204
No_of_seqs 281 out of 1152
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 09:07:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041627.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041627hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 99.9 5.5E-21 1.2E-25 148.7 19.9 183 2-186 278-472 (485)
2 TIGR00893 2A0114 d-galactonate 99.9 7.5E-21 1.6E-25 146.8 15.0 170 3-173 3-174 (399)
3 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.2E-20 4.9E-25 145.8 16.5 170 3-173 17-194 (412)
4 COG2814 AraJ Arabinose efflux 99.9 3.2E-20 6.9E-25 140.7 15.5 166 3-169 22-189 (394)
5 TIGR00903 2A0129 major facilit 99.9 4.6E-20 9.9E-25 141.8 15.8 167 5-173 2-170 (368)
6 PRK03545 putative arabinose tr 99.8 9.5E-20 2.1E-24 141.3 16.2 161 11-172 26-188 (390)
7 PRK11663 regulatory protein Uh 99.8 5.7E-20 1.2E-24 144.5 14.0 164 8-172 37-202 (434)
8 TIGR00881 2A0104 phosphoglycer 99.8 2.5E-20 5.4E-25 143.3 11.7 169 3-172 4-175 (379)
9 PRK10213 nepI ribonucleoside t 99.8 2.5E-19 5.4E-24 139.2 16.5 161 11-172 37-199 (394)
10 TIGR00891 2A0112 putative sial 99.8 2.6E-19 5.6E-24 139.1 15.6 167 4-172 22-192 (405)
11 TIGR00710 efflux_Bcr_CflA drug 99.8 2.4E-19 5.2E-24 138.5 14.6 166 7-173 18-185 (385)
12 PRK10077 xylE D-xylose transpo 99.8 1.6E-18 3.4E-23 137.9 19.5 180 5-185 282-474 (479)
13 TIGR00895 2A0115 benzoate tran 99.8 4.9E-19 1.1E-23 137.1 16.0 164 8-172 31-196 (398)
14 PRK10091 MFS transport protein 99.8 3.5E-19 7.5E-24 137.9 15.0 167 6-173 15-183 (382)
15 PF07690 MFS_1: Major Facilita 99.8 3.1E-20 6.8E-25 141.6 8.7 168 3-171 5-175 (352)
16 PRK10473 multidrug efflux syst 99.8 2.8E-19 6E-24 138.8 13.6 170 3-173 12-183 (392)
17 PRK15403 multidrug efflux syst 99.8 3.5E-19 7.6E-24 139.1 13.9 163 10-173 32-196 (413)
18 PRK10054 putative transporter; 99.8 1.2E-18 2.5E-23 135.5 16.4 168 3-172 16-186 (395)
19 PRK14995 methyl viologen resis 99.8 3.1E-19 6.8E-24 142.4 12.8 168 4-172 16-186 (495)
20 PRK11102 bicyclomycin/multidru 99.8 6.7E-19 1.5E-23 135.8 14.1 163 9-172 6-170 (377)
21 TIGR00711 efflux_EmrB drug res 99.8 2.1E-19 4.5E-24 143.0 11.2 168 4-172 12-181 (485)
22 PRK11551 putative 3-hydroxyphe 99.8 5.1E-19 1.1E-23 137.8 13.0 167 5-172 26-194 (406)
23 PRK12307 putative sialic acid 99.8 1.1E-18 2.4E-23 136.8 13.9 149 5-154 29-179 (426)
24 PRK15402 multidrug efflux syst 99.8 3.6E-18 7.8E-23 133.2 15.6 166 7-173 26-193 (406)
25 TIGR00887 2A0109 phosphate:H+ 99.8 2.7E-18 5.9E-23 137.3 15.2 174 6-180 300-500 (502)
26 TIGR01299 synapt_SV2 synaptic 99.8 7.7E-18 1.7E-22 138.5 17.6 161 11-173 184-359 (742)
27 TIGR00900 2A0121 H+ Antiporter 99.8 4E-18 8.7E-23 130.5 15.0 159 4-163 9-174 (365)
28 PRK10504 putative transporter; 99.8 4E-18 8.7E-23 135.3 14.5 168 3-171 19-188 (471)
29 PLN00028 nitrate transmembrane 99.8 4.5E-18 9.9E-23 135.1 14.7 165 4-170 46-221 (476)
30 COG2271 UhpC Sugar phosphate p 99.8 1.8E-18 3.9E-23 130.5 11.6 161 12-173 47-211 (448)
31 TIGR00886 2A0108 nitrite extru 99.8 1.1E-17 2.5E-22 128.5 16.2 168 3-172 10-192 (366)
32 KOG1330 Sugar transporter/spin 99.8 4.7E-20 1E-24 140.2 2.5 168 6-174 45-215 (493)
33 TIGR00890 2A0111 Oxalate/Forma 99.8 2.2E-18 4.7E-23 132.5 11.9 160 10-171 19-180 (377)
34 PRK11652 emrD multidrug resist 99.8 1.1E-17 2.4E-22 129.9 15.7 165 8-173 22-188 (394)
35 PRK09874 drug efflux system pr 99.8 2.6E-17 5.7E-22 128.2 17.4 166 4-171 24-196 (408)
36 PRK11646 multidrug resistance 99.8 2.1E-17 4.4E-22 128.7 16.1 166 4-171 20-188 (400)
37 PRK10077 xylE D-xylose transpo 99.8 5.6E-18 1.2E-22 134.7 13.1 157 14-172 32-218 (479)
38 PRK11043 putative transporter; 99.8 2.7E-17 5.8E-22 128.1 16.1 162 8-171 20-183 (401)
39 PRK10642 proline/glycine betai 99.8 2.6E-17 5.6E-22 131.3 16.1 168 4-173 26-217 (490)
40 TIGR00887 2A0109 phosphate:H+ 99.8 5.7E-17 1.2E-21 129.7 18.0 160 12-173 34-229 (502)
41 TIGR01299 synapt_SV2 synaptic 99.8 1.7E-17 3.6E-22 136.5 14.9 138 36-175 601-740 (742)
42 TIGR00894 2A0114euk Na(+)-depe 99.8 1.7E-17 3.8E-22 131.5 14.2 149 23-172 70-223 (465)
43 PRK10406 alpha-ketoglutarate t 99.8 3.3E-17 7.2E-22 128.8 15.5 167 4-172 32-222 (432)
44 TIGR00879 SP MFS transporter, 99.8 6.7E-17 1.5E-21 127.8 17.1 169 7-176 297-478 (481)
45 KOG0254 Predicted transporter 99.8 6.6E-17 1.4E-21 129.6 17.0 184 2-187 303-502 (513)
46 PRK03893 putative sialic acid 99.8 1.9E-17 4.2E-22 132.2 13.7 166 4-171 30-197 (496)
47 PRK03699 putative transporter; 99.8 3.6E-17 7.7E-22 127.2 14.6 153 9-162 22-177 (394)
48 TIGR00899 2A0120 sugar efflux 99.8 3.3E-17 7.1E-22 126.2 14.3 170 3-173 6-181 (375)
49 PRK09556 uhpT sugar phosphate 99.8 1E-17 2.3E-22 132.9 11.6 159 12-171 47-215 (467)
50 PRK10642 proline/glycine betai 99.8 1.6E-16 3.5E-21 126.8 18.3 167 6-174 262-435 (490)
51 PRK11273 glpT sn-glycerol-3-ph 99.8 7.5E-17 1.6E-21 127.5 16.2 158 13-172 48-212 (452)
52 TIGR00712 glpT glycerol-3-phos 99.7 2E-17 4.4E-22 130.2 12.1 158 13-172 46-210 (438)
53 PRK09705 cynX putative cyanate 99.7 4.7E-17 1E-21 126.5 13.9 148 10-159 25-175 (393)
54 TIGR00924 yjdL_sub1_fam amino 99.7 9.8E-17 2.1E-21 127.4 15.8 157 4-161 20-185 (475)
55 TIGR00898 2A0119 cation transp 99.7 2.2E-17 4.7E-22 132.2 12.1 153 15-172 110-267 (505)
56 cd06174 MFS The Major Facilita 99.7 1.3E-16 2.8E-21 121.4 15.4 160 3-163 8-169 (352)
57 PRK10207 dipeptide/tripeptide 99.7 1.4E-16 3E-21 126.8 15.8 151 4-155 24-181 (489)
58 TIGR00892 2A0113 monocarboxyla 99.7 7.1E-17 1.5E-21 127.7 13.6 157 11-169 36-195 (455)
59 PRK15462 dipeptide/tripeptide 99.7 3.3E-16 7.1E-21 123.6 16.7 157 5-162 20-183 (493)
60 TIGR00879 SP MFS transporter, 99.7 1.3E-16 2.9E-21 126.2 14.1 159 12-172 46-220 (481)
61 PRK15075 citrate-proton sympor 99.7 1.8E-16 3.8E-21 124.8 14.3 152 3-154 24-198 (434)
62 KOG2532 Permease of the major 99.7 1.9E-16 4.2E-21 124.3 14.1 149 23-172 67-220 (466)
63 PRK11195 lysophospholipid tran 99.7 2.6E-16 5.7E-21 122.3 14.6 158 11-172 20-177 (393)
64 PRK05122 major facilitator sup 99.7 3.7E-16 8E-21 121.6 15.3 154 4-158 25-189 (399)
65 TIGR00897 2A0118 polyol permea 99.7 2E-16 4.3E-21 123.3 13.8 164 6-170 25-195 (402)
66 PRK09556 uhpT sugar phosphate 99.7 2.6E-16 5.5E-21 125.0 14.0 161 4-165 268-446 (467)
67 TIGR00885 fucP L-fucose:H+ sym 99.7 4E-16 8.7E-21 121.8 14.9 154 9-163 18-202 (410)
68 PRK12382 putative transporter; 99.7 5E-16 1.1E-20 120.6 14.9 149 6-155 27-186 (392)
69 PRK15034 nitrate/nitrite trans 99.7 1.1E-15 2.3E-20 119.7 16.0 167 3-171 43-235 (462)
70 PRK09952 shikimate transporter 99.7 9.2E-16 2E-20 120.8 15.6 165 6-172 34-223 (438)
71 TIGR00806 rfc RFC reduced fola 99.7 1.5E-15 3.3E-20 117.7 14.8 156 13-171 45-205 (511)
72 PRK09584 tppB putative tripept 99.7 4E-15 8.6E-20 118.9 17.2 156 4-160 31-193 (500)
73 PRK10489 enterobactin exporter 99.7 9.8E-16 2.1E-20 119.9 13.2 166 5-172 28-200 (417)
74 PRK03893 putative sialic acid 99.7 8.7E-16 1.9E-20 122.7 13.0 147 12-159 293-444 (496)
75 PRK09705 cynX putative cyanate 99.7 5.3E-15 1.1E-19 115.0 16.0 169 5-174 216-387 (393)
76 TIGR00889 2A0110 nucleoside tr 99.7 2.1E-15 4.5E-20 118.1 13.7 162 11-173 225-407 (418)
77 PRK10489 enterobactin exporter 99.7 1.7E-15 3.7E-20 118.6 12.9 167 11-178 240-409 (417)
78 TIGR00901 2A0125 AmpG-related 99.7 3.8E-15 8.2E-20 114.3 14.6 160 10-172 4-182 (356)
79 KOG0255 Synaptic vesicle trans 99.7 3.4E-15 7.3E-20 120.1 14.8 145 24-173 113-259 (521)
80 PRK15011 sugar efflux transpor 99.7 5.3E-15 1.1E-19 115.0 15.3 168 4-172 25-198 (393)
81 TIGR00896 CynX cyanate transpo 99.7 4.4E-15 9.6E-20 113.9 14.7 148 8-158 14-165 (355)
82 PRK11551 putative 3-hydroxyphe 99.7 1.8E-15 3.9E-20 118.0 12.5 157 5-162 231-390 (406)
83 TIGR00880 2_A_01_02 Multidrug 99.7 1.2E-15 2.6E-20 101.2 9.3 129 43-171 11-141 (141)
84 TIGR00890 2A0111 Oxalate/Forma 99.6 5.1E-15 1.1E-19 113.8 13.9 149 11-160 222-374 (377)
85 PRK03633 putative MFS family t 99.6 5.4E-15 1.2E-19 114.5 14.0 139 5-144 17-157 (381)
86 COG2223 NarK Nitrate/nitrite t 99.6 4.4E-15 9.6E-20 112.3 12.9 165 4-171 24-196 (417)
87 TIGR00883 2A0106 metabolite-pr 99.6 1.3E-14 2.7E-19 112.3 15.7 166 5-171 4-193 (394)
88 PRK11902 ampG muropeptide tran 99.6 1E-14 2.2E-19 113.8 14.9 166 3-172 8-185 (402)
89 PRK09528 lacY galactoside perm 99.6 6.9E-15 1.5E-19 115.3 13.9 166 3-170 19-193 (420)
90 PRK15075 citrate-proton sympor 99.6 1.9E-14 4.2E-19 113.3 16.4 141 6-147 250-398 (434)
91 KOG2615 Permease of the major 99.6 1.8E-15 4E-20 112.9 9.6 111 30-142 69-181 (451)
92 PRK11663 regulatory protein Uh 99.6 6.7E-15 1.5E-19 115.8 13.2 164 7-171 256-427 (434)
93 PTZ00207 hypothetical protein; 99.6 2.3E-14 5E-19 115.1 16.2 159 9-171 42-208 (591)
94 KOG0253 Synaptic vesicle trans 99.6 8.7E-15 1.9E-19 109.1 12.6 136 38-175 389-526 (528)
95 TIGR00892 2A0113 monocarboxyla 99.6 5.2E-15 1.1E-19 117.1 12.2 154 8-162 255-415 (455)
96 PRK11273 glpT sn-glycerol-3-ph 99.6 3E-14 6.5E-19 112.8 15.9 165 6-171 265-439 (452)
97 TIGR00902 2A0127 phenyl propri 99.6 2.4E-14 5.1E-19 111.0 14.9 151 3-156 13-167 (382)
98 PRK10133 L-fucose transporter; 99.6 2.3E-14 5.1E-19 112.8 14.9 136 4-140 36-176 (438)
99 PF00083 Sugar_tr: Sugar (and 99.6 1.9E-18 4.2E-23 136.4 -8.4 177 3-182 262-450 (451)
100 PRK12307 putative sialic acid 99.6 2.7E-14 5.8E-19 112.1 14.9 137 11-148 248-388 (426)
101 KOG0252 Inorganic phosphate tr 99.6 8.5E-16 1.8E-20 117.2 5.9 178 4-182 314-511 (538)
102 cd06174 MFS The Major Facilita 99.6 3.1E-14 6.8E-19 108.3 14.6 159 4-163 185-347 (352)
103 PRK09952 shikimate transporter 99.6 7.3E-14 1.6E-18 110.1 16.9 165 5-171 261-435 (438)
104 PRK05122 major facilitator sup 99.6 3.5E-14 7.6E-19 110.5 15.0 160 8-171 230-391 (399)
105 TIGR00882 2A0105 oligosacchari 99.6 2.1E-14 4.5E-19 111.8 13.5 165 3-171 11-186 (396)
106 PRK11128 putative 3-phenylprop 99.6 3.6E-14 7.7E-19 110.0 14.4 162 3-171 13-181 (382)
107 TIGR00805 oat sodium-independe 99.6 8.6E-15 1.9E-19 119.7 11.4 160 10-171 49-283 (633)
108 PRK15011 sugar efflux transpor 99.6 9.6E-14 2.1E-18 108.0 16.2 159 9-170 231-392 (393)
109 PRK11010 ampG muropeptide tran 99.6 7E-14 1.5E-18 111.6 14.6 165 4-172 22-198 (491)
110 PRK09528 lacY galactoside perm 99.6 6.6E-14 1.4E-18 109.8 14.2 157 14-171 243-406 (420)
111 KOG0254 Predicted transporter 99.6 7.2E-14 1.6E-18 112.2 14.6 139 32-173 92-234 (513)
112 PRK10406 alpha-ketoglutarate t 99.6 2.3E-13 5E-18 107.1 16.7 155 7-163 256-419 (432)
113 TIGR00897 2A0118 polyol permea 99.6 2E-13 4.3E-18 106.5 16.0 159 4-165 232-398 (402)
114 PRK03633 putative MFS family t 99.6 2.4E-13 5.3E-18 105.3 16.4 151 10-162 216-366 (381)
115 KOG0569 Permease of the major 99.6 8.5E-14 1.8E-18 108.9 13.5 140 32-173 63-209 (485)
116 PRK12382 putative transporter; 99.6 1.6E-13 3.6E-18 106.6 15.0 157 8-167 230-388 (392)
117 PRK08633 2-acyl-glycerophospho 99.6 2.8E-13 6E-18 118.2 17.6 126 17-143 33-165 (1146)
118 PRK03699 putative transporter; 99.6 9.9E-14 2.1E-18 107.9 13.0 158 5-164 216-376 (394)
119 COG2271 UhpC Sugar phosphate p 99.6 3.1E-14 6.8E-19 107.8 9.4 163 5-168 263-434 (448)
120 TIGR00712 glpT glycerol-3-phos 99.6 1.1E-13 2.3E-18 109.2 12.9 167 5-172 262-437 (438)
121 TIGR00898 2A0119 cation transp 99.5 8.3E-14 1.8E-18 111.6 12.1 134 40-176 365-502 (505)
122 TIGR00899 2A0120 sugar efflux 99.5 5.6E-13 1.2E-17 102.7 15.2 151 11-163 216-369 (375)
123 KOG3764 Vesicular amine transp 99.5 1.9E-14 4.2E-19 108.0 6.7 149 24-173 101-252 (464)
124 TIGR00893 2A0114 d-galactonate 99.5 2.5E-13 5.4E-18 104.9 13.0 160 4-164 225-395 (399)
125 PRK03545 putative arabinose tr 99.5 1.1E-12 2.3E-17 102.0 16.3 157 9-168 220-380 (390)
126 PF11700 ATG22: Vacuole efflux 99.5 7.4E-13 1.6E-17 104.8 15.2 168 3-172 290-471 (477)
127 PRK06814 acylglycerophosphoeth 99.5 6.5E-13 1.4E-17 115.8 16.1 136 35-171 57-197 (1140)
128 TIGR00883 2A0106 metabolite-pr 99.5 4.2E-13 9.1E-18 103.8 13.4 148 5-153 230-386 (394)
129 PRK09874 drug efflux system pr 99.5 6.7E-13 1.4E-17 103.5 14.6 156 12-168 237-398 (408)
130 TIGR02718 sider_RhtX_FptX side 99.5 1.5E-12 3.2E-17 101.2 15.7 167 3-170 10-186 (390)
131 TIGR00891 2A0112 putative sial 99.5 6.5E-13 1.4E-17 103.2 13.5 138 12-150 256-398 (405)
132 TIGR02332 HpaX 4-hydroxyphenyl 99.5 3.8E-13 8.3E-18 105.3 12.2 152 3-155 251-408 (412)
133 TIGR01301 GPH_sucrose GPH fami 99.5 9.7E-13 2.1E-17 103.8 14.4 164 8-172 18-222 (477)
134 PF06609 TRI12: Fungal trichot 99.5 1.9E-13 4E-18 109.6 10.5 149 14-165 64-214 (599)
135 TIGR00792 gph sugar (Glycoside 99.5 6.4E-13 1.4E-17 104.6 12.9 163 9-172 14-198 (437)
136 KOG2533 Permease of the major 99.5 3.9E-13 8.5E-18 106.2 11.4 150 23-173 75-232 (495)
137 PF00083 Sugar_tr: Sugar (and 99.5 2.2E-16 4.7E-21 124.7 -7.9 140 32-173 49-196 (451)
138 TIGR00903 2A0129 major facilit 99.5 2.2E-12 4.8E-17 99.4 14.3 155 3-164 201-361 (368)
139 PRK11010 ampG muropeptide tran 99.5 2.3E-12 5E-17 103.0 14.7 160 11-171 239-405 (491)
140 PLN00028 nitrate transmembrane 99.5 4E-13 8.6E-18 107.0 9.8 152 10-164 268-429 (476)
141 COG2270 Permeases of the major 99.5 1.8E-12 3.9E-17 98.5 12.4 166 4-171 262-431 (438)
142 KOG2504 Monocarboxylate transp 99.4 2.8E-12 6.1E-17 102.1 13.5 158 10-169 62-222 (509)
143 PF05977 MFS_3: Transmembrane 99.4 4E-12 8.7E-17 101.7 14.1 154 8-162 24-184 (524)
144 TIGR00902 2A0127 phenyl propri 99.4 7.4E-12 1.6E-16 97.1 15.3 154 5-161 216-372 (382)
145 PRK10504 putative transporter; 99.4 3E-12 6.5E-17 101.9 13.4 140 6-146 273-418 (471)
146 PRK15034 nitrate/nitrite trans 99.4 1E-11 2.3E-16 97.4 15.2 164 3-168 261-454 (462)
147 KOG0252 Inorganic phosphate tr 99.4 9.8E-13 2.1E-17 100.7 9.1 171 4-175 51-252 (538)
148 TIGR02718 sider_RhtX_FptX side 99.4 9.9E-12 2.2E-16 96.6 15.0 155 7-161 221-384 (390)
149 COG2223 NarK Nitrate/nitrite t 99.4 4.1E-12 8.9E-17 96.4 12.2 162 3-166 227-399 (417)
150 TIGR00792 gph sugar (Glycoside 99.4 6.2E-12 1.4E-16 99.0 13.2 136 11-147 239-384 (437)
151 TIGR00895 2A0115 benzoate tran 99.4 7E-12 1.5E-16 97.1 12.2 135 5-140 261-397 (398)
152 COG3104 PTR2 Dipeptide/tripept 99.4 2.8E-12 6.1E-17 99.3 9.2 161 4-165 31-203 (498)
153 TIGR00900 2A0121 H+ Antiporter 99.4 1.8E-11 3.9E-16 93.8 12.6 130 15-145 232-365 (365)
154 COG2814 AraJ Arabinose efflux 99.4 1.5E-10 3.2E-15 88.6 17.0 161 3-166 220-384 (394)
155 TIGR00881 2A0104 phosphoglycer 99.4 1.3E-11 2.7E-16 95.0 11.6 144 6-150 228-379 (379)
156 TIGR00896 CynX cyanate transpo 99.3 4.1E-11 8.8E-16 92.0 13.7 139 6-145 209-350 (355)
157 PF05977 MFS_3: Transmembrane 99.3 4.5E-11 9.8E-16 95.7 14.1 151 12-163 236-389 (524)
158 PRK15402 multidrug efflux syst 99.3 1.6E-10 3.5E-15 90.3 15.3 137 11-149 232-376 (406)
159 PRK10091 MFS transport protein 99.3 2.5E-10 5.5E-15 88.5 16.2 154 11-167 216-375 (382)
160 PF06813 Nodulin-like: Nodulin 99.3 6.2E-11 1.3E-15 85.8 11.8 133 8-143 16-157 (250)
161 TIGR00894 2A0114euk Na(+)-depe 99.3 2.7E-11 5.8E-16 96.3 11.0 159 3-163 270-445 (465)
162 TIGR01272 gluP glucose/galacto 99.3 7.7E-11 1.7E-15 88.9 12.8 145 5-152 151-299 (310)
163 TIGR00882 2A0105 oligosacchari 99.3 1E-10 2.3E-15 91.1 13.4 153 12-165 233-392 (396)
164 PRK11902 ampG muropeptide tran 99.3 2.4E-10 5.2E-15 89.3 15.4 142 18-163 234-385 (402)
165 KOG2504 Monocarboxylate transp 99.3 1.3E-11 2.8E-16 98.4 8.2 159 4-163 308-471 (509)
166 PRK11128 putative 3-phenylprop 99.3 3E-10 6.5E-15 88.2 15.3 149 9-160 220-371 (382)
167 PF13347 MFS_2: MFS/sugar tran 99.3 2.6E-11 5.7E-16 95.4 9.5 159 11-170 18-200 (428)
168 COG0738 FucP Fucose permease [ 99.3 2.6E-10 5.6E-15 86.4 14.2 153 10-163 29-205 (422)
169 PRK09669 putative symporter Ya 99.3 5.3E-11 1.1E-15 94.1 11.2 160 11-171 26-207 (444)
170 PRK08633 2-acyl-glycerophospho 99.3 1.6E-10 3.5E-15 101.1 15.2 161 9-170 247-412 (1146)
171 PRK14995 methyl viologen resis 99.3 1.5E-10 3.2E-15 92.9 13.1 137 6-143 271-413 (495)
172 TIGR00889 2A0110 nucleoside tr 99.3 1.1E-10 2.3E-15 91.7 12.1 162 2-172 10-183 (418)
173 TIGR00711 efflux_EmrB drug res 99.3 1.1E-10 2.3E-15 93.2 12.1 138 5-143 266-410 (485)
174 PRK10473 multidrug efflux syst 99.2 4.2E-10 9.1E-15 87.5 14.5 138 11-154 220-360 (392)
175 KOG0253 Synaptic vesicle trans 99.2 2.5E-10 5.4E-15 85.7 12.2 152 18-173 102-255 (528)
176 TIGR00901 2A0125 AmpG-related 99.2 9.9E-11 2.2E-15 89.9 10.1 122 6-127 221-355 (356)
177 PRK11646 multidrug resistance 99.2 5.7E-10 1.2E-14 87.2 14.3 131 13-144 227-360 (400)
178 TIGR00710 efflux_Bcr_CflA drug 99.2 1.1E-09 2.5E-14 84.6 15.9 132 7-140 219-358 (385)
179 PRK10429 melibiose:sodium symp 99.2 4.3E-10 9.3E-15 89.7 13.6 136 10-146 247-396 (473)
180 PRK10429 melibiose:sodium symp 99.2 3E-10 6.5E-15 90.6 12.5 163 8-171 20-204 (473)
181 COG2807 CynX Cyanate permease 99.2 5.1E-10 1.1E-14 83.8 12.6 159 3-162 217-379 (395)
182 KOG4686 Predicted sugar transp 99.2 7.3E-11 1.6E-15 85.7 7.7 136 9-145 279-416 (459)
183 PRK10213 nepI ribonucleoside t 99.2 2.5E-09 5.4E-14 83.4 16.5 151 7-160 229-383 (394)
184 KOG2816 Predicted transporter 99.2 4E-10 8.6E-15 88.8 11.8 132 43-175 75-206 (463)
185 PRK09848 glucuronide transport 99.2 6E-10 1.3E-14 88.3 12.9 140 6-146 240-391 (448)
186 PRK11043 putative transporter; 99.2 1.5E-09 3.3E-14 84.7 14.9 133 9-143 218-357 (401)
187 PRK11462 putative transporter; 99.2 2.1E-09 4.6E-14 85.4 15.4 161 10-171 25-207 (460)
188 PF05631 DUF791: Protein of un 99.2 2.7E-09 5.7E-14 80.2 14.8 159 15-174 55-222 (354)
189 PRK10054 putative transporter; 99.2 6.6E-10 1.4E-14 86.7 12.1 144 15-160 227-376 (395)
190 PRK10133 L-fucose transporter; 99.2 1.2E-09 2.5E-14 86.4 13.4 147 7-156 271-421 (438)
191 PRK06814 acylglycerophosphoeth 99.2 8.4E-10 1.8E-14 96.7 13.8 148 8-156 239-410 (1140)
192 PRK11102 bicyclomycin/multidru 99.1 3.6E-09 7.8E-14 81.8 15.1 128 7-136 207-342 (377)
193 TIGR00788 fbt folate/biopterin 99.1 1.5E-09 3.2E-14 86.4 12.8 164 4-172 36-212 (468)
194 PRK11195 lysophospholipid tran 99.1 1.1E-08 2.4E-13 79.7 16.7 151 11-164 222-376 (393)
195 PF07690 MFS_1: Major Facilita 99.1 5.3E-10 1.1E-14 85.3 9.0 128 6-134 218-352 (352)
196 PF03825 Nuc_H_symport: Nucleo 99.1 7.4E-09 1.6E-13 80.7 15.0 141 7-148 220-369 (400)
197 PF03825 Nuc_H_symport: Nucleo 99.1 2.6E-09 5.7E-14 83.2 12.4 132 2-136 10-144 (400)
198 PRK09669 putative symporter Ya 99.0 9.4E-09 2E-13 81.4 13.4 107 40-146 274-391 (444)
199 PRK11462 putative transporter; 99.0 3.2E-08 6.9E-13 78.8 16.1 114 32-146 266-390 (460)
200 PF13347 MFS_2: MFS/sugar tran 99.0 3.6E-08 7.8E-13 77.7 16.1 142 4-146 235-387 (428)
201 TIGR00885 fucP L-fucose:H+ sym 99.0 9.7E-09 2.1E-13 80.5 12.6 140 10-152 248-396 (410)
202 KOG2532 Permease of the major 99.0 1.5E-09 3.2E-14 85.9 7.3 165 2-167 266-446 (466)
203 COG2211 MelB Na+/melibiose sym 99.0 4.1E-08 8.9E-13 76.9 15.0 140 6-146 248-399 (467)
204 COG2807 CynX Cyanate permease 99.0 3.4E-08 7.4E-13 74.2 13.9 152 10-163 28-181 (395)
205 TIGR00926 2A1704 Peptide:H+ sy 99.0 8.9E-08 1.9E-12 78.8 16.7 156 9-165 2-179 (654)
206 PF01306 LacY_symp: LacY proto 98.9 1.5E-09 3.2E-14 83.9 5.6 163 3-169 16-189 (412)
207 PF01306 LacY_symp: LacY proto 98.9 6.1E-09 1.3E-13 80.5 8.6 156 16-172 242-404 (412)
208 TIGR00886 2A0108 nitrite extru 98.9 8.7E-09 1.9E-13 79.3 9.4 122 6-129 237-365 (366)
209 KOG0255 Synaptic vesicle trans 98.9 7.7E-08 1.7E-12 77.8 15.1 138 42-180 362-504 (521)
210 KOG2325 Predicted transporter/ 98.9 1.4E-08 3.1E-13 79.6 10.4 153 19-173 59-234 (488)
211 PRK09848 glucuronide transport 98.9 6.5E-08 1.4E-12 76.7 14.2 119 9-128 23-157 (448)
212 TIGR01301 GPH_sucrose GPH fami 98.9 2.1E-07 4.5E-12 73.9 15.8 171 3-173 267-476 (477)
213 PF12832 MFS_1_like: MFS_1 lik 98.9 1E-08 2.2E-13 60.7 6.3 65 3-68 9-73 (77)
214 TIGR00788 fbt folate/biopterin 98.9 1.9E-08 4.2E-13 80.1 9.4 122 23-145 282-415 (468)
215 KOG2533 Permease of the major 98.8 1.8E-08 3.9E-13 80.2 8.9 149 3-152 282-440 (495)
216 COG0738 FucP Fucose permease [ 98.8 1E-07 2.3E-12 72.6 12.0 148 8-158 250-399 (422)
217 PF03209 PUCC: PUCC protein; 98.8 5.5E-08 1.2E-12 74.4 10.1 129 20-150 6-158 (403)
218 COG2211 MelB Na+/melibiose sym 98.8 2.6E-07 5.6E-12 72.5 12.8 163 9-172 27-211 (467)
219 PRK11652 emrD multidrug resist 98.7 5.9E-07 1.3E-11 70.0 14.0 132 9-142 222-359 (394)
220 PF05978 UNC-93: Ion channel r 98.7 1.1E-06 2.3E-11 59.3 12.0 137 2-138 4-146 (156)
221 PF11700 ATG22: Vacuole efflux 98.7 8.8E-07 1.9E-11 70.6 13.2 136 38-173 78-252 (477)
222 PF03092 BT1: BT1 family; Int 98.7 7.7E-07 1.7E-11 70.3 12.6 154 15-170 11-177 (433)
223 PF06609 TRI12: Fungal trichot 98.6 2.4E-06 5.2E-11 69.4 14.0 133 7-140 323-464 (599)
224 PRK15403 multidrug efflux syst 98.6 7.6E-06 1.7E-10 64.4 16.5 153 5-160 229-389 (413)
225 KOG3762 Predicted transporter 98.5 1.7E-07 3.7E-12 73.8 5.6 153 9-162 386-541 (618)
226 KOG2563 Permease of the major 98.5 2E-06 4.2E-11 66.7 9.8 119 24-144 75-203 (480)
227 COG0477 ProP Permeases of the 98.5 1.3E-05 2.7E-10 59.4 14.0 141 11-152 19-169 (338)
228 TIGR00924 yjdL_sub1_fam amino 98.4 8.6E-06 1.9E-10 65.3 13.6 105 64-168 353-468 (475)
229 PRK10207 dipeptide/tripeptide 98.3 3.8E-06 8.3E-11 67.5 9.2 98 43-140 322-438 (489)
230 KOG2563 Permease of the major 98.3 7.9E-06 1.7E-10 63.4 9.7 124 21-145 293-423 (480)
231 PRK09584 tppB putative tripept 98.3 5.9E-06 1.3E-10 66.6 9.6 94 45-138 335-439 (500)
232 PTZ00207 hypothetical protein; 98.2 3.5E-05 7.7E-10 62.9 12.0 162 8-172 367-556 (591)
233 PF03137 OATP: Organic Anion T 98.1 4.8E-07 1E-11 73.1 -0.9 164 6-171 15-252 (539)
234 TIGR00769 AAA ADP/ATP carrier 98.0 0.00024 5.2E-09 56.6 13.4 114 29-142 43-190 (472)
235 PF06779 DUF1228: Protein of u 98.0 0.00012 2.5E-09 43.9 8.0 73 8-81 6-78 (85)
236 KOG1330 Sugar transporter/spin 98.0 6.8E-05 1.5E-09 58.6 8.7 135 12-147 262-417 (493)
237 TIGR01272 gluP glucose/galacto 97.9 2E-05 4.4E-10 59.6 5.4 90 82-171 11-117 (310)
238 PF01770 Folate_carrier: Reduc 97.9 0.00089 1.9E-08 52.2 13.3 156 15-172 24-185 (412)
239 KOG3762 Predicted transporter 97.8 2.8E-05 6E-10 61.8 4.4 66 4-70 21-86 (618)
240 PF03209 PUCC: PUCC protein; 97.8 0.0046 1E-07 48.0 15.9 119 24-143 239-363 (403)
241 KOG0637 Sucrose transporter an 97.7 4.3E-05 9.4E-10 59.5 3.5 128 10-138 48-200 (498)
242 KOG3626 Organic anion transpor 97.7 0.00053 1.2E-08 56.9 9.8 157 15-173 118-347 (735)
243 KOG4686 Predicted sugar transp 97.6 1.8E-05 4E-10 58.2 0.3 121 23-144 73-199 (459)
244 KOG3764 Vesicular amine transp 97.5 0.00017 3.6E-09 55.5 4.7 130 36-165 312-451 (464)
245 KOG2816 Predicted transporter 97.5 0.0039 8.4E-08 49.8 12.4 121 23-144 271-393 (463)
246 COG2270 Permeases of the major 97.4 0.014 3.1E-07 45.6 14.3 137 35-172 64-224 (438)
247 PF03092 BT1: BT1 family; Int 97.4 0.00054 1.2E-08 54.4 6.3 119 26-145 252-382 (433)
248 KOG3626 Organic anion transpor 97.4 0.0083 1.8E-07 50.2 12.9 69 3-71 401-472 (735)
249 KOG2615 Permease of the major 97.3 0.0018 4E-08 49.8 8.2 121 22-143 290-414 (451)
250 PF06963 FPN1: Ferroportin1 (F 97.3 0.0075 1.6E-07 47.8 12.0 126 10-136 274-411 (432)
251 PF00854 PTR2: POT family; In 97.3 0.0013 2.7E-08 51.2 7.6 104 61-164 2-119 (372)
252 KOG1237 H+/oligopeptide sympor 97.2 0.029 6.2E-07 46.2 14.4 156 8-164 51-241 (571)
253 PF03219 TLC: TLC ATP/ADP tran 97.2 0.011 2.4E-07 47.6 11.8 100 43-142 72-205 (491)
254 PRK15462 dipeptide/tripeptide 97.1 0.017 3.7E-07 46.6 12.4 107 32-139 311-436 (493)
255 KOG3098 Uncharacterized conser 97.1 0.01 2.2E-07 47.3 10.6 114 24-138 273-409 (461)
256 TIGR00805 oat sodium-independe 97.1 0.0023 4.9E-08 53.4 7.2 71 4-74 340-413 (633)
257 PF06963 FPN1: Ferroportin1 (F 97.0 0.061 1.3E-06 42.7 14.0 154 14-167 22-199 (432)
258 KOG3098 Uncharacterized conser 96.9 0.019 4.1E-07 45.7 10.5 134 5-138 20-159 (461)
259 KOG4332 Predicted sugar transp 96.9 0.00099 2.1E-08 49.0 3.0 152 19-174 62-226 (454)
260 PRK03612 spermidine synthase; 96.7 0.13 2.8E-06 42.1 14.4 135 23-160 44-189 (521)
261 PF03137 OATP: Organic Anion T 96.7 0.00041 8.8E-09 56.5 0.0 141 4-144 315-515 (539)
262 PF02487 CLN3: CLN3 protein; 96.5 0.021 4.6E-07 44.7 8.0 124 42-170 71-197 (402)
263 PF13000 Acatn: Acetyl-coenzym 95.1 0.21 4.5E-06 40.3 8.4 52 15-67 21-77 (544)
264 KOG3574 Acetyl-CoA transporter 95.0 0.24 5.3E-06 38.7 8.4 52 12-66 48-104 (510)
265 COG3202 ATP/ADP translocase [E 94.6 1.9 4.2E-05 34.8 12.5 113 30-142 62-209 (509)
266 COG3104 PTR2 Dipeptide/tripept 94.3 0.74 1.6E-05 37.1 9.8 82 82-163 395-482 (498)
267 PF02487 CLN3: CLN3 protein; 93.8 0.54 1.2E-05 37.1 8.0 60 82-141 336-395 (402)
268 TIGR00806 rfc RFC reduced fola 93.1 0.46 1E-05 38.4 6.8 125 4-129 272-401 (511)
269 TIGR00939 2a57 Equilibrative N 92.2 5.1 0.00011 32.2 13.4 29 85-114 110-138 (437)
270 KOG1479 Nucleoside transporter 91.6 5.7 0.00012 31.5 13.5 19 9-27 33-51 (406)
271 KOG2325 Predicted transporter/ 87.6 0.42 9E-06 38.6 2.2 60 100-159 407-466 (488)
272 PF11947 DUF3464: Protein of u 87.3 2.4 5.1E-05 28.6 5.2 81 52-132 56-145 (153)
273 PF01770 Folate_carrier: Reduc 87.2 10 0.00022 30.2 9.5 63 4-67 257-322 (412)
274 KOG3810 Micronutrient transpor 81.7 19 0.00041 28.3 8.5 122 4-126 244-371 (433)
275 KOG0637 Sucrose transporter an 80.0 3.2 6.8E-05 33.4 4.1 35 34-68 336-370 (498)
276 KOG3880 Predicted small molecu 76.5 2.2 4.8E-05 32.6 2.2 122 43-170 75-201 (409)
277 KOG2601 Iron transporter [Inor 76.4 37 0.00081 27.1 10.5 41 119-159 177-217 (503)
278 KOG4830 Predicted sugar transp 76.1 3.8 8.2E-05 30.6 3.3 51 11-62 34-93 (412)
279 COG5336 Uncharacterized protei 75.1 12 0.00026 23.5 4.8 26 43-68 55-81 (116)
280 TIGR00769 AAA ADP/ATP carrier 73.4 49 0.0011 27.1 12.1 69 91-159 276-345 (472)
281 KOG3574 Acetyl-CoA transporter 73.4 20 0.00043 28.6 6.6 46 100-145 388-433 (510)
282 TIGR00880 2_A_01_02 Multidrug 73.3 20 0.00043 22.5 6.4 26 43-68 100-125 (141)
283 PF03547 Mem_trans: Membrane t 72.8 21 0.00045 28.0 7.0 10 47-56 12-21 (385)
284 TIGR00939 2a57 Equilibrative N 71.9 51 0.0011 26.6 9.6 56 82-137 373-428 (437)
285 KOG3810 Micronutrient transpor 66.6 13 0.00028 29.1 4.4 98 44-142 56-155 (433)
286 COG5336 Uncharacterized protei 66.6 30 0.00065 21.8 6.5 35 111-145 36-70 (116)
287 KOG3097 Predicted membrane pro 64.8 66 0.0014 25.2 8.1 67 44-110 72-139 (390)
288 PF13000 Acatn: Acetyl-coenzym 62.0 84 0.0018 26.1 8.2 45 99-143 423-467 (544)
289 KOG1479 Nucleoside transporter 57.6 99 0.0021 24.8 9.7 105 32-138 284-399 (406)
290 PF02694 UPF0060: Uncharacteri 56.5 44 0.00094 21.1 4.6 47 29-76 54-100 (107)
291 PF10183 ESSS: ESSS subunit of 56.4 24 0.00051 22.2 3.6 34 140-173 53-86 (105)
292 PF03741 TerC: Integral membra 55.2 59 0.0013 22.7 5.8 43 101-143 16-58 (183)
293 PF03219 TLC: TLC ATP/ADP tran 55.1 1.2E+02 0.0026 25.1 13.0 61 99-159 300-361 (491)
294 PF07857 DUF1632: CEO family ( 54.7 20 0.00043 26.6 3.5 26 113-138 75-100 (254)
295 PF12273 RCR: Chitin synthesis 53.3 9.1 0.0002 25.0 1.5 7 148-154 2-8 (130)
296 PF07672 MFS_Mycoplasma: Mycop 53.2 12 0.00026 27.8 2.2 50 114-163 3-57 (267)
297 KOG3880 Predicted small molecu 52.8 46 0.00099 25.9 5.1 56 82-137 343-398 (409)
298 PF07672 MFS_Mycoplasma: Mycop 51.5 1E+02 0.0022 23.1 9.0 44 83-126 206-251 (267)
299 PRK11469 hypothetical protein; 49.5 58 0.0013 22.9 5.0 31 44-74 149-179 (188)
300 COG0861 TerC Membrane protein 46.4 1.2E+02 0.0026 22.6 7.2 50 96-145 31-80 (254)
301 PRK02237 hypothetical protein; 45.8 77 0.0017 20.1 5.1 45 31-76 58-102 (109)
302 TIGR01666 YCCS hypothetical me 45.7 1.8E+02 0.0038 25.4 8.1 36 44-79 37-76 (704)
303 PF12832 MFS_1_like: MFS_1 lik 42.5 69 0.0015 18.6 6.6 35 117-151 35-69 (77)
304 PF01733 Nucleoside_tran: Nucl 42.1 8.4 0.00018 29.3 0.0 22 92-114 8-29 (309)
305 PF02659 DUF204: Domain of unk 41.6 64 0.0014 18.0 4.3 33 32-64 26-58 (67)
306 PF04281 Tom22: Mitochondrial 41.0 68 0.0015 21.3 4.0 22 105-126 59-80 (137)
307 TIGR01667 YCCS_YHJK integral m 40.7 1.6E+02 0.0035 25.6 7.2 36 45-80 38-77 (701)
308 PF12805 FUSC-like: FUSC-like 40.5 1.2E+02 0.0027 22.7 6.0 8 46-53 12-19 (284)
309 PF01914 MarC: MarC family int 39.3 1.4E+02 0.003 21.3 7.2 52 107-158 28-80 (203)
310 PF13493 DUF4118: Domain of un 39.1 31 0.00068 21.2 2.3 18 43-60 88-105 (105)
311 TIGR03173 pbuX xanthine permea 39.1 2E+02 0.0043 23.0 10.2 61 6-67 4-65 (406)
312 COG1268 BioY Uncharacterized c 38.0 1.4E+02 0.0031 21.0 6.0 17 43-59 95-111 (184)
313 TIGR02230 ATPase_gene1 F0F1-AT 37.9 1E+02 0.0022 19.2 5.8 27 45-71 58-84 (100)
314 PF10066 DUF2304: Uncharacteri 37.2 1.1E+02 0.0024 19.4 4.8 17 130-146 46-62 (115)
315 PF11283 DUF3084: Protein of u 36.5 52 0.0011 19.4 2.6 19 45-63 15-33 (79)
316 COG2119 Predicted membrane pro 33.5 1.7E+02 0.0038 20.6 5.7 35 40-74 144-178 (190)
317 TIGR00210 gltS sodium--glutama 32.9 72 0.0016 25.5 3.8 43 11-55 138-180 (398)
318 PF11298 DUF3099: Protein of u 30.2 1.2E+02 0.0026 17.7 4.5 27 54-80 11-37 (73)
319 PF05297 Herpes_LMP1: Herpesvi 30.2 17 0.00036 27.3 -0.0 11 162-172 179-189 (381)
320 KOG4112 Signal peptidase subun 27.3 1.2E+02 0.0026 18.7 3.1 18 128-146 34-51 (101)
321 PF03616 Glt_symporter: Sodium 26.9 1.1E+02 0.0023 24.3 3.8 45 12-57 139-186 (368)
322 PF03606 DcuC: C4-dicarboxylat 26.6 3.6E+02 0.0079 22.1 7.8 15 51-65 105-119 (465)
323 PF05631 DUF791: Protein of un 26.2 3.3E+02 0.0072 21.5 14.3 123 16-142 145-303 (354)
324 KOG1237 H+/oligopeptide sympor 26.2 1.9E+02 0.0041 24.5 5.3 57 88-144 465-521 (571)
325 TIGR00986 3a0801s05tom22 mitoc 25.4 2.2E+02 0.0047 19.2 4.7 21 105-125 57-77 (145)
326 PRK10263 DNA translocase FtsK; 25.1 4.4E+02 0.0095 25.2 7.4 16 43-58 65-80 (1355)
327 TIGR02840 spore_YtaF putative 25.0 2.6E+02 0.0057 20.0 5.6 12 58-70 188-199 (206)
328 PRK14231 camphor resistance pr 24.3 1.9E+02 0.0041 18.9 4.1 6 9-14 40-45 (129)
329 PF02632 BioY: BioY family; I 24.1 2.3E+02 0.005 19.0 5.0 19 43-61 66-84 (148)
330 COG2274 SunT ABC-type bacterio 24.0 5E+02 0.011 22.9 12.2 25 33-57 160-184 (709)
331 PF01733 Nucleoside_tran: Nucl 23.8 22 0.00048 27.0 -0.4 55 82-136 249-303 (309)
332 PF06939 DUF1286: Protein of u 23.4 1.7E+02 0.0037 18.7 3.4 18 43-60 32-49 (114)
333 PF08080 zf-RNPHF: RNPHF zinc 23.2 27 0.00059 16.9 0.0 8 54-61 3-10 (36)
334 TIGR00836 amt ammonium transpo 22.6 3E+02 0.0064 22.2 5.6 31 106-136 300-330 (403)
335 PF11299 DUF3100: Protein of u 22.4 65 0.0014 23.6 1.7 35 100-135 190-224 (241)
336 COG4262 Predicted spermidine s 22.3 4.2E+02 0.0091 21.3 12.4 114 24-140 38-162 (508)
337 TIGR03716 R_switched_YkoY inte 22.2 3.1E+02 0.0068 19.9 5.5 40 103-142 15-54 (215)
338 COG1079 Uncharacterized ABC-ty 22.2 3.7E+02 0.0081 20.7 7.4 92 43-139 20-116 (304)
339 PF08551 DUF1751: Eukaryotic i 21.5 2.1E+02 0.0046 17.6 5.4 36 41-76 25-61 (99)
340 TIGR00926 2A1704 Peptide:H+ sy 21.0 3.6E+02 0.0077 23.4 6.0 31 108-138 592-622 (654)
341 PF15061 DUF4538: Domain of un 20.9 1.7E+02 0.0036 16.2 3.7 18 145-162 4-21 (58)
342 PF04226 Transgly_assoc: Trans 20.3 1.5E+02 0.0033 15.5 4.7 12 128-139 6-17 (48)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.5e-21 Score=148.73 Aligned_cols=183 Identities=31% Similarity=0.616 Sum_probs=155.6
Q ss_pred hhhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
...++++|.+....|...++++.|++..+..+ .+........+.++++.++.||+|||++++.+..++.+..+.+....
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~-an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEEAQY-ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999988444 44444555999999999999999999999999998888877765433
Q ss_pred -----H-------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 041627 82 -----I-------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGST 149 (204)
Q Consensus 82 -----~-------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (204)
. .+.........+..|.+|+.+-+.+|++|++.|..+.++....+++..++....++.+.+.+|- ..
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~ 435 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YV 435 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hh
Confidence 1 1233344555667788899999999999999999999999999999999999999999999986 68
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHhch
Q 041627 150 FLILAGIAVLAVVFVILFVPETQGLTFLEVEQRWKER 186 (204)
Q Consensus 150 ~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~ 186 (204)
|+.+.+.+.+..++.++++||||+|+.+|+.+..+++
T Consensus 436 filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 436 FILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 8888888888888999999999999999888776665
No 2
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.87 E-value=7.5e-21 Score=146.79 Aligned_cols=170 Identities=15% Similarity=0.145 Sum_probs=144.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
++.++...+.+....|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++........
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 81 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWG-YVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA 81 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHH-HHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC
Confidence 455667777888889999999999999988888888777 899999999999999999999998888887777766654
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
+.+.+.+++.+.+.+...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+|++.++..+.+.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 6667777888888888888888999999999999999999999999999999999999889999999998877777666
Q ss_pred HHHHHhhccCCCC
Q 041627 161 VVFVILFVPETQG 173 (204)
Q Consensus 161 ~~~~~~~~~e~~~ 173 (204)
.+...+..||+++
T Consensus 162 ~~~~~~~~~~~~~ 174 (399)
T TIGR00893 162 GVLWLKFIPDPPQ 174 (399)
T ss_pred HHHhhheecCCCC
Confidence 6555555666543
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.86 E-value=2.2e-20 Score=145.79 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=143.4
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
+++++.......+..|.+.+++|+++.+.++..+....+ ..+++++.|+++||+|||+++..+.++..++.....+..
T Consensus 17 ~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T TIGR02332 17 FIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAA-YVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATG 95 (412)
T ss_pred HHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHH-HHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344555566777788888899999999999988888877 899999999999999999999999888888888777654
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH------hhCcchhhhHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD------LVGTGSTFLILA 154 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~ 154 (204)
..+...+++.+.+.+...+....++.|++|+++|+++.++......+|..+++.+.+.+.+ ..|||+.|++.+
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~ 175 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEG 175 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHH
Confidence 6677788888888888888888899999999999999999999999999999999887764 368999999887
Q ss_pred HHHHHHHHHHHhhccCCCC
Q 041627 155 GIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 155 ~~~~i~~~~~~~~~~e~~~ 173 (204)
...++..++.++++||+++
T Consensus 176 ~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHhhccCCCcc
Confidence 7777666666677788764
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.2e-20 Score=140.71 Aligned_cols=166 Identities=20% Similarity=0.152 Sum_probs=154.6
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
.|...+.-+.....+|.+.+|+|.+..+.++.++.+..+ ..+++++...+.||+.||++++....+++++.++..+.+
T Consensus 22 ~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~-~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~ 100 (394)
T COG2814 22 AFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALG-VALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPS 100 (394)
T ss_pred HHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 355566667888899999999999999999999999999 799999999999999999999999999999999988887
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
..+++.|++.+...+.+.++...+..++.|+++|+++.++......++..++.++..++-+.+|||.+|+..+.+.++.
T Consensus 101 f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~ 180 (394)
T COG2814 101 FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLA 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 041627 161 VVFVILFVP 169 (204)
Q Consensus 161 ~~~~~~~~~ 169 (204)
.+..+..+|
T Consensus 181 ~~~~~~~lP 189 (394)
T COG2814 181 LLLLWKLLP 189 (394)
T ss_pred HHHHHHhCC
Confidence 888888888
No 5
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.85 E-value=4.6e-20 Score=141.84 Aligned_cols=167 Identities=14% Similarity=0.065 Sum_probs=133.6
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH--HHH
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW--AFI 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~ 82 (204)
.+.+.+..+.+.+|.+.+++|.++.+.++..+....+ ..+++++.|+++||+|||+++.........+...... ...
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g-~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAA-FLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3456678889999999999999999999988887777 8999999999999999998766554444333221221 115
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (204)
.+...+++.+.+.+. ........+|.+|+++|+++.++......+|..+++.+.+.+.+..|||..|++.+.+.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 677778887777654 4445566699999999999999999999999999999999999999999999988888877777
Q ss_pred HHHhhccCCCC
Q 041627 163 FVILFVPETQG 173 (204)
Q Consensus 163 ~~~~~~~e~~~ 173 (204)
+.++++||+++
T Consensus 160 ~~~~~lp~~p~ 170 (368)
T TIGR00903 160 LVLAALPALPF 170 (368)
T ss_pred HHHHHcCCCCC
Confidence 77778888754
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.84 E-value=9.5e-20 Score=141.33 Aligned_cols=161 Identities=17% Similarity=0.148 Sum_probs=135.0
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLA 88 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 88 (204)
+.....+|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+++..+..+..++...+.... +.+.+.+
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWV-VALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3445567899999999999999888888777 788999999999999999999999888888877776654 5666677
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhc
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
+..+...+...+....++.|.+|+++|+++.|+......++..++|.+.+.+.+..+|++.|++.+.+.++..+......
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~ 184 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLL 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777776667777889999999999999999999999999999999999988889999999998887776655555556
Q ss_pred cCCC
Q 041627 169 PETQ 172 (204)
Q Consensus 169 ~e~~ 172 (204)
||.+
T Consensus 185 ~~~~ 188 (390)
T PRK03545 185 PLLP 188 (390)
T ss_pred CCCC
Confidence 6653
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.84 E-value=5.7e-20 Score=144.46 Aligned_cols=164 Identities=16% Similarity=0.113 Sum_probs=135.1
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
...+.+..+.|.+.+++|.+..+.++..+..... ..+++++.|+++||+|||+.+.++.++..++.+...... +.+.
T Consensus 37 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (434)
T PRK11663 37 FTRKSFNAAMPEMLADLGLSRSDIGLLATLFYIT-YGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFA 115 (434)
T ss_pred HhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3334667889999999999999988888887777 899999999999999999999999888888877766654 4455
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
+.+++.+...+...+....++.|++|+++|+++.++.+....+|+.+++.+.+.+.+.++|++.|++.+++.++..+...
T Consensus 116 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~ 195 (434)
T PRK11663 116 LLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLC 195 (434)
T ss_pred HHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666667777889999999999999999999999999999999999999999999999887776665544445
Q ss_pred hhccCCC
Q 041627 166 LFVPETQ 172 (204)
Q Consensus 166 ~~~~e~~ 172 (204)
+.+||++
T Consensus 196 ~~~~~~p 202 (434)
T PRK11663 196 WRLRDKP 202 (434)
T ss_pred HHcCCCH
Confidence 5566653
No 8
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.84 E-value=2.5e-20 Score=143.33 Aligned_cols=169 Identities=13% Similarity=0.107 Sum_probs=140.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
++..+.....+....|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++.+......
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIA-YGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHH-HHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 455666677888889999999999999988888888777 899999999999999999999999888888877776655
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHH-HHHHHHHhhCcchhhhHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQ-NFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
+.+.+.+++.+.+.+...+....++.|++|+++|+++.++......+|..+++. +.+.+.+..+|++.+++.+.+.++
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 566667777788888888888899999999999999999999999999999994 556666777899988887777766
Q ss_pred HHHHHHhhccCCC
Q 041627 160 AVVFVILFVPETQ 172 (204)
Q Consensus 160 ~~~~~~~~~~e~~ 172 (204)
..+...++.||++
T Consensus 163 ~~~~~~~~~~~~~ 175 (379)
T TIGR00881 163 VSLICFLLLRDSP 175 (379)
T ss_pred HHHHHheeeCCCc
Confidence 6566666666654
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.84 E-value=2.5e-19 Score=139.19 Aligned_cols=161 Identities=12% Similarity=0.049 Sum_probs=136.0
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLA 88 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 88 (204)
+.....+|.+.+++|.++.+.+...+..... ..++.++.|+++||+|||+.+..+..+..++.+...... +.+...+
T Consensus 37 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 37 FLPVSLLTPMAQDLGISEGVAGQSVTVTAFV-AMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHHhhHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 3445578889999999999988888888777 789999999999999999999999998888777665544 6677778
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhc
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
++.+.+.+...+....++.|++|+++|+++.++.....+++..++|.+.+.+.+.++|++.|++.+.+.++..+......
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88888888888888899999999999999999999999999999999999999999999999887766665544444456
Q ss_pred cCCC
Q 041627 169 PETQ 172 (204)
Q Consensus 169 ~e~~ 172 (204)
||++
T Consensus 196 p~~~ 199 (394)
T PRK10213 196 PSLP 199 (394)
T ss_pred CCCC
Confidence 7754
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.83 E-value=2.6e-19 Score=139.07 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=135.8
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+......+......|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+++..+..+..++.+......
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~-~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 100 (405)
T TIGR00891 22 LLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALIS-RWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGY 100 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 34455666778888999999999999988888888777 899999999999999999999998888887777766554
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--cchhhhHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG--TGSTFLILAGIAVL 159 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i 159 (204)
..+...+++.+.+.+...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+ |++.+++.....++
T Consensus 101 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 101 ITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF 180 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 5566677888888788888888999999999999999999999999999999999988887766 88888765444333
Q ss_pred HHHHHHhhccCCC
Q 041627 160 AVVFVILFVPETQ 172 (204)
Q Consensus 160 ~~~~~~~~~~e~~ 172 (204)
. ++.....||++
T Consensus 181 ~-~~~~~~~~~~~ 192 (405)
T TIGR00891 181 A-LWLRKNIPEAE 192 (405)
T ss_pred H-HHHHHhCCCCh
Confidence 3 34445567764
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.83 E-value=2.4e-19 Score=138.53 Aligned_cols=166 Identities=16% Similarity=0.137 Sum_probs=138.5
Q ss_pred hhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHH
Q 041627 7 FTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISV 84 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 84 (204)
..+.....+..|.+.+++|.++.+.++..+....+ ..++.++.|+++||+|||+.+..+..+..++.+...... ...
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLG-FAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETL 96 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 34556667778899999999999988888888777 899999999999999999999998888887777666554 555
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
...+++.+.+.+...+....++.|.+|+++|+++.++......++..+++.+.+.+.+..+|+..+++.+....+..+..
T Consensus 97 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (385)
T TIGR00710 97 LVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALI 176 (385)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 66677777777777788889999999999999999999999999999999999999888999999988877777666666
Q ss_pred HhhccCCCC
Q 041627 165 ILFVPETQG 173 (204)
Q Consensus 165 ~~~~~e~~~ 173 (204)
.+..||+++
T Consensus 177 ~~~~~~~~~ 185 (385)
T TIGR00710 177 FFILPETLP 185 (385)
T ss_pred HHhCCCCCC
Confidence 666777644
No 12
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.83 E-value=1.6e-18 Score=137.86 Aligned_cols=180 Identities=34% Similarity=0.608 Sum_probs=131.5
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--- 81 (204)
++..+++...++.|.+.++.|.+....... ........+++.++.++++||+|||+.++.+..+..++.+.+....
T Consensus 282 ~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~-~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~ 360 (479)
T PRK10077 282 QQFVGINVVLYYAPEIFKTLGASTDIALLQ-TIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ 360 (479)
T ss_pred HHHhChhHHHHHHHHHHHHcCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 345556667788899999999887664443 3334444789999999999999999999988888777766654332
Q ss_pred ---HHHH-HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH------HhhCcchhhh
Q 041627 82 ---ISVI-GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA------DLVGTGSTFL 151 (204)
Q Consensus 82 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~ 151 (204)
.... ..............+..+.+++|.+|+++|+++.|+.....++++.+++.+.+.+. +..+++..++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 440 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYW 440 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHH
Confidence 1111 12222222333345677899999999999999999999999999999887776544 4677877888
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHhc
Q 041627 152 ILAGIAVLAVVFVILFVPETQGLTFLEVEQRWKE 185 (204)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~ 185 (204)
+.++..+++.+..+++.||+++++.+|.++..++
T Consensus 441 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 441 IYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 8887777777777777899998887776665433
No 13
>TIGR00895 2A0115 benzoate transport.
Probab=99.82 E-value=4.9e-19 Score=137.07 Aligned_cols=164 Identities=21% Similarity=0.204 Sum_probs=135.7
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.......++.|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++........ ..+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (398)
T TIGR00895 31 YDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIG-MAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLL 109 (398)
T ss_pred HHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHH-HHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 3445667788999999999999888887777766 799999999999999999999988887777766665544 4556
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
+.+.+.+.+.+...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+|+..+++.+.+..+..++..
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 66777777777778888999999999999999999999999999999999999999999999988887666666656666
Q ss_pred hhccCCC
Q 041627 166 LFVPETQ 172 (204)
Q Consensus 166 ~~~~e~~ 172 (204)
.+.||++
T Consensus 190 ~~~~~~~ 196 (398)
T TIGR00895 190 RFLPESI 196 (398)
T ss_pred HhCCCCC
Confidence 6677764
No 14
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.82 E-value=3.5e-19 Score=137.88 Aligned_cols=167 Identities=14% Similarity=0.058 Sum_probs=139.5
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HH
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--IS 83 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~ 83 (204)
...+.+.....+|.+.+++|.+..+.++..+....+ ..+++++.|+++||+|||+++..+..+..++.+...... +.
T Consensus 15 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~ 93 (382)
T PRK10091 15 LGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALG-VVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLM 93 (382)
T ss_pred HHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHH-HHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 334446777889999999999999988888888888 899999999999999999999999988888877776655 66
Q ss_pred HHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 163 (204)
+.+.+.+.+.+.+...+....++.|++|+++|+++.+.......++..+++.+.+.+.+..+|++.|++.+.+..+..+.
T Consensus 94 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 94 LAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 67777777777766666777788999999999999999999899999999999998888899999999888777666555
Q ss_pred HHhhccCCCC
Q 041627 164 VILFVPETQG 173 (204)
Q Consensus 164 ~~~~~~e~~~ 173 (204)
..+++||.++
T Consensus 174 ~~~~lp~~~~ 183 (382)
T PRK10091 174 IYFWVPDIRD 183 (382)
T ss_pred HHHhCCCCCc
Confidence 5666787643
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.82 E-value=3.1e-20 Score=141.59 Aligned_cols=168 Identities=21% Similarity=0.257 Sum_probs=138.1
Q ss_pred hhhhhhhhhhHHhhhH-HHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSP-TIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
.+....+........| .+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++.....+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 83 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLG-SALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS 83 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHH-HHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh
Confidence 3555666677788888 77788999999989888888777 899999999999999999999999888888855544422
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
+.+...+++.+.+.+...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+|++.+++.+.+.++
T Consensus 84 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 163 (352)
T PF07690_consen 84 NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLI 163 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHH
T ss_pred hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhh
Confidence 566777788888888888899999999999999999999999999999999999999888888999999998888887
Q ss_pred HHHHHHhhccCC
Q 041627 160 AVVFVILFVPET 171 (204)
Q Consensus 160 ~~~~~~~~~~e~ 171 (204)
..++...+.+++
T Consensus 164 ~~il~~~~~~~~ 175 (352)
T PF07690_consen 164 AAILFILFLPEP 175 (352)
T ss_dssp HHHHHHCCC---
T ss_pred hhhhHhhhhhhc
Confidence 766444445544
No 16
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.82 E-value=2.8e-19 Score=138.80 Aligned_cols=170 Identities=18% Similarity=0.151 Sum_probs=139.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
.+++..+.+.....+|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++........
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAG-MAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 445666777778899999999999999888887777766 789999999999999999999998888877777665544
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
......+++.+.+.+...+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|++.+++.+.+..+.
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~ 170 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILV 170 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHH
Confidence 4455566676766666677788999999999999999999999999999999999888878889999888888777777
Q ss_pred HHHHHhhccCCCC
Q 041627 161 VVFVILFVPETQG 173 (204)
Q Consensus 161 ~~~~~~~~~e~~~ 173 (204)
.+...+..||+++
T Consensus 171 ~~~~~~~~~~~~~ 183 (392)
T PRK10473 171 LLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHcCCCCC
Confidence 6666666777643
No 17
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.82 E-value=3.5e-19 Score=139.14 Aligned_cols=163 Identities=13% Similarity=0.060 Sum_probs=134.0
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
.....+-+|.+.+++|.+..+.++..+.+..+ ..+++++.|+++||+|||+++..+..+..++........ ..+.+.
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 110 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAG-GMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34455556678888999999988888888877 799999999999999999999999888888777766554 566777
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
+++.+.+.+...+..+.++.|.+|+++|++++++......++..++|.+.+.+.+..+|++.|++.++..++..+...+.
T Consensus 111 r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 190 (413)
T PRK15403 111 RFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLA 190 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 88887776555566678889999999999999999999999999999999988888899999998888777766555566
Q ss_pred ccCCCC
Q 041627 168 VPETQG 173 (204)
Q Consensus 168 ~~e~~~ 173 (204)
+||+++
T Consensus 191 lp~~~~ 196 (413)
T PRK15403 191 MPETVK 196 (413)
T ss_pred CCCCcc
Confidence 788743
No 18
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=1.2e-18 Score=135.49 Aligned_cols=168 Identities=10% Similarity=0.059 Sum_probs=130.1
Q ss_pred hhhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
.++...+.+...+++|.+.+ ++|+++.+.++..+..... ..+++++.|+++||+|||+++..+.....++.....+.+
T Consensus 16 ~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~-~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 16 SLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTI-GVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 45566777888888888775 5899999999888888777 789999999999999999999888887777666665544
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
+.....+.+.+.......+....+..|..|+++|+++.++.+...++|..++|.+.+.+.+ .+|+..|+..+...++
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i 173 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAF 173 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHH
Confidence 3333334444444444456677888999999999999999999999999999999998764 7899999887777666
Q ss_pred HHHHHHhhccCCC
Q 041627 160 AVVFVILFVPETQ 172 (204)
Q Consensus 160 ~~~~~~~~~~e~~ 172 (204)
..+...+++||++
T Consensus 174 ~~i~~~~~~~~~~ 186 (395)
T PRK10054 174 PLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHhccc
Confidence 6555555566553
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.81 E-value=3.1e-19 Score=142.41 Aligned_cols=168 Identities=16% Similarity=0.078 Sum_probs=139.7
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+........+..-+|.+.+++|.+..+.++..+.+... ...+.++.|+++||+|||+.+..+..+..++.+.+....
T Consensus 16 ~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~-~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~ 94 (495)
T PRK14995 16 IPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLV-MAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTA 94 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 44444555677789999999999998889988888777 788999999999999999999999999988888777665
Q ss_pred HHHHHHHHHHHHhcccccccchhhccccc-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVY-REQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
+.+++.+.+.+.+.+...+.....+.+.+ |+++|+++.|+......+|..++|.+.+.+.+..+||+.|++...+.++.
T Consensus 95 ~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~ 174 (495)
T PRK14995 95 SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVV 174 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence 66777788888877777666666665655 78999999999999999999999999999999999999999887777776
Q ss_pred HHHHHhhccCCC
Q 041627 161 VVFVILFVPETQ 172 (204)
Q Consensus 161 ~~~~~~~~~e~~ 172 (204)
.++..+.+||.+
T Consensus 175 ~~l~~~~l~~~~ 186 (495)
T PRK14995 175 MGLTARYVPRQA 186 (495)
T ss_pred HHHHHHhCCCCC
Confidence 666666677754
No 20
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.81 E-value=6.7e-19 Score=135.84 Aligned_cols=163 Identities=20% Similarity=0.184 Sum_probs=137.1
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHH
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIG 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~ 86 (204)
+.....+.+|.+.+++|.++.+.+...+..... ..++.++.|+++||+|||+.+..+..+..++........ .....
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILG-FAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 446677899999999999999988888888777 799999999999999999999999888888877766554 45566
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHh
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVIL 166 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 166 (204)
.+++.+.+.+...+....++.|.+|+++|+++.++......++..++|.+.+.+.+..+|++.+++.+.+..+..+...+
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 66777777776677778899999999999999999999999999999999999999899999988877777776666566
Q ss_pred hccCCC
Q 041627 167 FVPETQ 172 (204)
Q Consensus 167 ~~~e~~ 172 (204)
..||++
T Consensus 165 ~~~~~~ 170 (377)
T PRK11102 165 FIPETL 170 (377)
T ss_pred hCCccC
Confidence 677753
No 21
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.81 E-value=2.1e-19 Score=142.98 Aligned_cols=168 Identities=18% Similarity=0.165 Sum_probs=142.3
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+.............|.+.+++|.+..+.++..+..... ..++.++.|+++||+|||+.+..+..+..++.+......
T Consensus 12 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 90 (485)
T TIGR00711 12 FMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLA-NAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNL 90 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHH-HHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCH
Confidence 34445556777889999999999999888888887777 899999999999999999999999888888877766554
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAV 161 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (204)
..+...+++.+.+.+...+....++.|.+|+++|+++.++......++..++|.+.+.+.+..+|++.|++...+.++..
T Consensus 91 ~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 91 ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHH
Confidence 56677788888888888888889999999999999999999999999999999999999999999999998877776666
Q ss_pred HHHHhhccCCC
Q 041627 162 VFVILFVPETQ 172 (204)
Q Consensus 162 ~~~~~~~~e~~ 172 (204)
+...+..||++
T Consensus 171 ~~~~~~~~~~~ 181 (485)
T TIGR00711 171 VVAFFILPRDK 181 (485)
T ss_pred HHHHHHcCCcc
Confidence 66666667653
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.81 E-value=5.1e-19 Score=137.84 Aligned_cols=167 Identities=18% Similarity=0.142 Sum_probs=136.4
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
.+....+......|.+.+++|.++.+.++..+....+ ..+++++.|+++||+|||+++..+..+..++.+...... .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 104 (406)
T PRK11551 26 LEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILG-LLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFP 104 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHH
Confidence 3444556677888999999999999988888888777 899999999999999999999998877777666555444 5
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (204)
.+.+.+++.+.+.+...+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|+..+++.+.+.++..+
T Consensus 105 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 105 SLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 56667777777777777788899999999999999999999999999999999888887888899888887766665555
Q ss_pred HHHhhccCCC
Q 041627 163 FVILFVPETQ 172 (204)
Q Consensus 163 ~~~~~~~e~~ 172 (204)
....++||++
T Consensus 185 ~~~~~l~~~~ 194 (406)
T PRK11551 185 LLMRWLPESR 194 (406)
T ss_pred HHHHhCCCCh
Confidence 5556678764
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.80 E-value=1.1e-18 Score=136.82 Aligned_cols=149 Identities=19% Similarity=0.150 Sum_probs=127.1
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
......+...+..|.+.+++|.++.+.+...+....+ ..+++++.|+++||+|||+.+..+..+..++........ .
T Consensus 29 ~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~-~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 107 (426)
T PRK12307 29 FDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIG-RPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVI 107 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3445556677788888899999999988877777766 899999999999999999999999998888887766654 5
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILA 154 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (204)
.+.+.+++.+.+.+...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+|++.+++..
T Consensus 108 ~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 108 MLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 677778888888888888888999999999999999999999999999999998888888889999887643
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.80 E-value=3.6e-18 Score=133.18 Aligned_cols=166 Identities=16% Similarity=0.114 Sum_probs=134.3
Q ss_pred hhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHH
Q 041627 7 FTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISV 84 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 84 (204)
..+...+.+.+|.+.+++|.++.+.++..+....+ ..++.++.|+++||+|||+.+..+.....++........ +.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l 104 (406)
T PRK15402 26 YIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAG-GMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQF 104 (406)
T ss_pred HhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 34455666778888899999999988888877777 899999999999999999999988888777777665554 455
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
...+++.+...+...+....++.|.+|+++|.+..++......++..++|.+.+.+.+..+|++.+++.+++.++..+..
T Consensus 105 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 105 TLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 56667777666666677788899999999999999998888888889999999988888899999988887777666655
Q ss_pred HhhccCCCC
Q 041627 165 ILFVPETQG 173 (204)
Q Consensus 165 ~~~~~e~~~ 173 (204)
.+..||+++
T Consensus 185 ~~~~~~~~~ 193 (406)
T PRK15402 185 WRAMPETAG 193 (406)
T ss_pred HHhCCCCCc
Confidence 566777643
No 25
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.80 E-value=2.7e-18 Score=137.29 Aligned_cols=174 Identities=22% Similarity=0.312 Sum_probs=121.1
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhh-----------hHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHH
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLAL-----------LPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISL 74 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 74 (204)
+...+|+...|.|.+.++.|+++.+.+. ..........+++.++.++++||+|||+.++.+..+..++.
T Consensus 300 ~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~ 379 (502)
T TIGR00887 300 LDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLF 379 (502)
T ss_pred HHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHH
Confidence 3445667788899999998887543111 11223333356788999999999999999888777666655
Q ss_pred HHHHHHH-----HHH-HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh----
Q 041627 75 VLLSWAF-----ISV-IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV---- 144 (204)
Q Consensus 75 ~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---- 144 (204)
.+..... ... .........+..+..+..+.+.+|.+|++.|+++.|+.+..+++++++++.+.+.+.+..
T Consensus 380 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 459 (502)
T TIGR00887 380 FVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK 459 (502)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc
Confidence 5444321 111 111122223345566778888999999999999999999999999999999999887743
Q ss_pred ------CcchhhhHHHHHHHHHHHHHHhhccCCCCcCHHHHH
Q 041627 145 ------GTGSTFLILAGIAVLAVVFVILFVPETQGLTFLEVE 180 (204)
Q Consensus 145 ------~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~ 180 (204)
++...+++++++.+++.+. .+++|||++++.||.+
T Consensus 460 ~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 460 GYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELS 500 (502)
T ss_pred cccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhh
Confidence 3345677777776666544 4677999988876653
No 26
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.79 E-value=7.7e-18 Score=138.48 Aligned_cols=161 Identities=17% Similarity=0.100 Sum_probs=130.6
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLA 88 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 88 (204)
..+...+|.+.+++|.+..+.+++.+....+ .+++++++|+++||+|||+.++++.++..++.++..+.. ..+++.+
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG-~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R 262 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLG-MMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCR 262 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4566778888889999999888888887777 899999999999999999999998888887777766654 6677788
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-------------CcchhhhHHHH
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV-------------GTGSTFLILAG 155 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 155 (204)
++.+++.++..+....+++|.+|++.|++.+++...+..+|.++++.+...+...+ +||+.+++.++
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~l 342 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAF 342 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999888776665443 46666665554
Q ss_pred HHHHHHHHHHhhccCCCC
Q 041627 156 IAVLAVVFVILFVPETQG 173 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~~~ 173 (204)
.. +..++..+++||+++
T Consensus 343 p~-ll~ll~~~~lPESPr 359 (742)
T TIGR01299 343 PC-VFAIGALTFMPESPR 359 (742)
T ss_pred HH-HHHHHHHHHcCCCHH
Confidence 44 444555677899843
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.79 E-value=4e-18 Score=130.53 Aligned_cols=159 Identities=13% Similarity=0.041 Sum_probs=130.4
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+....+........|.+..+.+.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++........
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~-~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLP-YVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL 87 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH-HHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44455666777888999999999999988888888777 899999999999999999999988877666655544332
Q ss_pred -----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 82 -----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
+.+...+.+.+.+.+...+...+++.|++|+++|+++.++......+|..+++.+.+.+.+..+|++.+++.+..
T Consensus 88 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 167 (365)
T TIGR00900 88 GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVG 167 (365)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 455666777777777777888899999999999999999999999999999999999999999999988877665
Q ss_pred HHHHHHH
Q 041627 157 AVLAVVF 163 (204)
Q Consensus 157 ~~i~~~~ 163 (204)
.++..+.
T Consensus 168 ~~~~~~~ 174 (365)
T TIGR00900 168 FAISALL 174 (365)
T ss_pred HHHHHHH
Confidence 5555433
No 28
>PRK10504 putative transporter; Provisional
Probab=99.79 E-value=4e-18 Score=135.32 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=138.0
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
.+++....+.+.++.|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+++..+..+..++.+......
T Consensus 19 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 97 (471)
T PRK10504 19 FFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLT-VAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGT 97 (471)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 345556667888899999999999999888877776666 789999999999999999999888777777666555443
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
..+...+.+.+.+.+...+....++.|.+|+++|+++.++......++..++|.+.+.+.+..+|++.|++......+.
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 5566677888888877788888999999999999999999999999999999999999999999999998877666666
Q ss_pred HHHHHhhccCC
Q 041627 161 VVFVILFVPET 171 (204)
Q Consensus 161 ~~~~~~~~~e~ 171 (204)
.+......|+.
T Consensus 178 ~~~~~~~~~~~ 188 (471)
T PRK10504 178 AIATLMLMPNY 188 (471)
T ss_pred HHHHHHhCCCc
Confidence 55555555554
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.79 E-value=4.5e-18 Score=135.12 Aligned_cols=165 Identities=12% Similarity=0.105 Sum_probs=123.4
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+......+...++.|.+.+++|++..+.++..+....+ ..+++++.|+++||+|||+++..+.++..++.+......
T Consensus 46 ~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~-~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~ 124 (476)
T PLN00028 46 FTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSG-SIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA 124 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH
Confidence 44455566778888999999999999988776666555 789999999999999999999888887777776665554
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH---------hhCcchhhhH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD---------LVGTGSTFLI 152 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~ 152 (204)
..+.+.+++.+.+.+... ....+++|++|+++|+++.|+.+...++|+.+++.+.+.+.. ..|||+.|++
T Consensus 125 ~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i 203 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFV 203 (476)
T ss_pred HHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHH
Confidence 444455666666555433 344578999999999999999988888888777766654432 1479999998
Q ss_pred HHHHHHHHHHHHHhhccC
Q 041627 153 LAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 153 ~~~~~~i~~~~~~~~~~e 170 (204)
.+++.++..+...++.++
T Consensus 204 ~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 204 PGLLHIIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHHHHHHHHcCc
Confidence 888777665555544433
No 30
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.8e-18 Score=130.48 Aligned_cols=161 Identities=16% Similarity=0.111 Sum_probs=144.3
Q ss_pred hHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHH
Q 041627 12 TVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLAL 89 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (204)
.+..-.|.+.++.++|.++.+.+.+..... ..++.++.|.++||.+.|..+..++++.++..+.+.++. ..+.++..
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~-YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~ 125 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSIT-YGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWV 125 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 355667899999999999999999999888 999999999999999999999999999999999998876 55666677
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHH--HHHHHhhCcchhhhHHHHHHHHHHHHHHhh
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNF--LTVADLVGTGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
+.+.+.+.-.|.+...++.++|+++||+..++.+...++|+.+.|.+. +.+..+.+|+..|++.+++.++..++.++.
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 788888888899999999999999999999999999999999999998 888888899999999999988888888887
Q ss_pred ccCCCC
Q 041627 168 VPETQG 173 (204)
Q Consensus 168 ~~e~~~ 173 (204)
.+++++
T Consensus 206 ~rd~Pq 211 (448)
T COG2271 206 LRDRPQ 211 (448)
T ss_pred hCCCcc
Confidence 777654
No 31
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.78 E-value=1.1e-17 Score=128.46 Aligned_cols=168 Identities=20% Similarity=0.199 Sum_probs=126.5
Q ss_pred hhhhhhhhhhHHhhhHH-HHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPT-IVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
++..+...+...++.|. +.+++|.++.+.++..+....+ ..+++++.|+++||+|||+.+..+..+..++.+......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~ 88 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLA-GAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV 88 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHH-HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 45566677888999995 7788999999988888888777 899999999999999999999999888888877765543
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh----------hCcch
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL----------VGTGS 148 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~ 148 (204)
..+...+++.+...+ ..+....+++|++|+++|+++.++.....++|..+++.+.+.+... .+|++
T Consensus 89 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~ 167 (366)
T TIGR00886 89 QSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGW 167 (366)
T ss_pred hhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 445556666666543 4455678899999999999999999988888888777777665542 37888
Q ss_pred hhhH-HHHHHHHHHHHHHhhccCCC
Q 041627 149 TFLI-LAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 149 ~~~~-~~~~~~i~~~~~~~~~~e~~ 172 (204)
.++. .+.+..+..++.....+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 168 AFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCC
Confidence 8843 34444444444444455543
No 32
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=4.7e-20 Score=140.21 Aligned_cols=168 Identities=14% Similarity=0.108 Sum_probs=147.1
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HH
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--IS 83 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~ 83 (204)
+.+.-|.+-.-.+...+.+|.+++..+++.+..... ..+.+++.|+++||++||+++.++..++.++.+...++. +.
T Consensus 45 ny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~-~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq 123 (493)
T KOG1330|consen 45 NYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVV-FMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQ 123 (493)
T ss_pred HHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHH-HHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHH
Confidence 444445566666777777999999988888888777 899999999999999999999999999999999888776 78
Q ss_pred HHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAVLAVV 162 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~ 162 (204)
+.+.+.+.+.+...+.++.+++++|.+|.++|++.+++.+....+|+.+|-.....+.+..+ ||+.|+..+++.++..+
T Consensus 124 ~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~ 203 (493)
T KOG1330|consen 124 VLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGL 203 (493)
T ss_pred HHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999988888877777766 99999999999999888
Q ss_pred HHHhhccCCCCc
Q 041627 163 FVILFVPETQGL 174 (204)
Q Consensus 163 ~~~~~~~e~~~~ 174 (204)
+..++.+|.+++
T Consensus 204 L~~~f~~eP~rg 215 (493)
T KOG1330|consen 204 LVFLFVREPERG 215 (493)
T ss_pred HHHhhccCcccc
Confidence 888888887544
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.78 E-value=2.2e-18 Score=132.46 Aligned_cols=160 Identities=16% Similarity=0.179 Sum_probs=130.0
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
.+....+.|.+.+++|.++.+.++..+....+ ..+++++.|+++||+|||+++..+..+..++........ +.+...
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIG-LAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999988888887 899999999999999999999999888888887776655 455566
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
+.+.+.+.+...+.......|++| ++|+++.++......+|..+++++.+.+.+..+|++.+++.+++.++..+...++
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666555666677788887 5799999999999888888878777777778899999998888777766665555
Q ss_pred ccCC
Q 041627 168 VPET 171 (204)
Q Consensus 168 ~~e~ 171 (204)
.+|+
T Consensus 177 ~~~~ 180 (377)
T TIGR00890 177 IGYP 180 (377)
T ss_pred eecC
Confidence 5543
No 34
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.78 E-value=1.1e-17 Score=129.92 Aligned_cols=165 Identities=12% Similarity=0.094 Sum_probs=130.9
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.......+..|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+.....++.+...... ..+.
T Consensus 22 ~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 100 (394)
T PRK11652 22 MAQTIYVPAIADMARDLNVREGAVQAVMAAYLLT-YGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLI 100 (394)
T ss_pred HHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3344555678889999999999988888887777 899999999999999999999988888777776665544 4555
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
..+++.+.+.+...+....+..|.+++++|+++.+.......++..++|.+.+.+.+..+|++.+++.+....+..+...
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMA 180 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH
Confidence 66666666655555666677889999999999999999888889999999999888888999999887776665555555
Q ss_pred hhccCCCC
Q 041627 166 LFVPETQG 173 (204)
Q Consensus 166 ~~~~e~~~ 173 (204)
++.||+++
T Consensus 181 ~~~~~~~~ 188 (394)
T PRK11652 181 RWMPETRP 188 (394)
T ss_pred HhCCccCc
Confidence 66787643
No 35
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.78 E-value=2.6e-17 Score=128.24 Aligned_cols=166 Identities=22% Similarity=0.214 Sum_probs=129.1
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhh-----hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQL-----ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS 78 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 78 (204)
++...+.+...+++|.+.+++|.+..+. +...+..... ..+++++.|+++||+|||+.+..+.....++.....
T Consensus 24 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 102 (408)
T PRK09874 24 FLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLF-SAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMG 102 (408)
T ss_pred HHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHH
Confidence 4455566778889999999999886542 4455555555 789999999999999999999988887777766655
Q ss_pred HHH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 79 WAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
... +.+.+.+++.+... +..+....++.|..|+++|+++.++......++..+++.+.+.+.+..+|+..+++.+.+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (408)
T PRK09874 103 LAQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASV 181 (408)
T ss_pred HHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 543 45555566666543 345666678889999999999999999999999999999999998889999999888877
Q ss_pred HHHHHHHHHhhccCC
Q 041627 157 AVLAVVFVILFVPET 171 (204)
Q Consensus 157 ~~i~~~~~~~~~~e~ 171 (204)
.++..+...++.||+
T Consensus 182 ~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 182 LFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHhccC
Confidence 776666666666665
No 36
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.77 E-value=2.1e-17 Score=128.73 Aligned_cols=166 Identities=14% Similarity=0.030 Sum_probs=133.6
Q ss_pred hhhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 4 FQQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
+....+.+...+++|.++ ++.|.+..+.+...+..... ..+..++.|+++||+|||+.+..+..+..++.+.+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~-~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFI-QQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH-HHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 455667777788888765 56899999988888887777 678899999999999999999999888888877776554
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
+.+...+.+.+...+...+...+++.|.+|+++|+++.++......+|..++|.+.+.+. ..+|++.|++.+...++.
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 455566666666665566677788999999999999999999999999999999999888 779999988877766665
Q ss_pred HHHHHhhccCC
Q 041627 161 VVFVILFVPET 171 (204)
Q Consensus 161 ~~~~~~~~~e~ 171 (204)
.+...+..||.
T Consensus 178 ~i~~~~~~~~~ 188 (400)
T PRK11646 178 AAFNAWLLPAY 188 (400)
T ss_pred HHHHHHhCCcc
Confidence 55545556664
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.77 E-value=5.6e-18 Score=134.68 Aligned_cols=157 Identities=17% Similarity=0.117 Sum_probs=123.0
Q ss_pred HhhhHHHHHHc--------CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-----
Q 041627 14 MYYSPTIVQMA--------GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA----- 80 (204)
Q Consensus 14 ~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----- 80 (204)
....|.+.+++ +.++.+.++..+....+ ..+++++.|+++||+|||++++.+..+..++.+.....
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig-~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~ 110 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIG-CIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFT 110 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 33445555555 77888888888888777 89999999999999999999999988887776655432
Q ss_pred -------H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH--------Hh
Q 041627 81 -------F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA--------DL 143 (204)
Q Consensus 81 -------~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~ 143 (204)
. ..+++.+++.+.+.++..+....+++|++|+++|+++.++......+|..+++.+...+. +.
T Consensus 111 ~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 111 SIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred cccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 1 345678889999999999999999999999999999999999888888888776654433 34
Q ss_pred hCcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 144 VGTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 144 ~~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.+||+.|++.+...++.. +..+++||++
T Consensus 191 ~gWr~~f~~~~~~~~~~~-~~~~~l~~s~ 218 (479)
T PRK10077 191 DGWRYMFASEAIPALLFL-MLLYFVPETP 218 (479)
T ss_pred CChHHHHHHHHHHHHHHH-HHHHcCCCCc
Confidence 689999987766665554 4456688875
No 38
>PRK11043 putative transporter; Provisional
Probab=99.77 E-value=2.7e-17 Score=128.08 Aligned_cols=162 Identities=15% Similarity=0.094 Sum_probs=126.0
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.+.+.+.+..|.+.+++|.++.+.++..+..... ..+++++.|+++||+|||+.+..+..+..++........ +.+.
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAG-FALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLL 98 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 3444555566667888999999989888888777 799999999999999999999988887777766665544 4555
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
..+++.+.+.+...+....++.|.+|+++|++..+.......++..++|.+.+.+.+..+|+..+++.+.+.++..+...
T Consensus 99 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 99 VLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 55666666555555556678899999999999999888888889999999999999999999988887777666544433
Q ss_pred hhccCC
Q 041627 166 LFVPET 171 (204)
Q Consensus 166 ~~~~e~ 171 (204)
+.+|+
T Consensus 179 -~~~~~ 183 (401)
T PRK11043 179 -RLKPS 183 (401)
T ss_pred -HcCCC
Confidence 34443
No 39
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.77 E-value=2.6e-17 Score=131.34 Aligned_cols=168 Identities=13% Similarity=0.078 Sum_probs=123.1
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchh-hhhh-----HHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQ-LALL-----PSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~-----~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 77 (204)
+.....+..+.+..|.+.++++.+.+. .+.. .++...+ ..+++++.|+++||+|||+++..+.+++.++.+.+
T Consensus 26 ~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~ 104 (490)
T PRK10642 26 AMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLI-RPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI 104 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344455566667778877777543322 1221 2333334 78999999999999999999999999999998888
Q ss_pred HHHH--H--------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH------
Q 041627 78 SWAF--I--------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA------ 141 (204)
Q Consensus 78 ~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------ 141 (204)
.+.+ . .+...+++.|.+.++..+....+++|++|+++|++..++......+|..+++.+...+.
T Consensus 105 a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~ 184 (490)
T PRK10642 105 GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA 184 (490)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 7765 1 26778889999999999999999999999999999999988877777777776554332
Q ss_pred --HhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 142 --DLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 142 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
..+|||+.|++...+.++. ++....+||+++
T Consensus 185 ~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~ 217 (490)
T PRK10642 185 NFLDWGWRIPFFIALPLGIIG-LYLRHALEETPA 217 (490)
T ss_pred HhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChh
Confidence 2578999998865444433 334456788743
No 40
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.77 E-value=5.7e-17 Score=129.73 Aligned_cols=160 Identities=19% Similarity=0.116 Sum_probs=118.3
Q ss_pred hHHhhhHHHHHHc-----CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----
Q 041627 12 TVMYYSPTIVQMA-----GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----- 81 (204)
Q Consensus 12 ~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----- 81 (204)
.+....|.+..+. ..++.+.++..+....+ ..+++++.|+++||+|||+.+..+.++..++.+......
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig-~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~ 112 (502)
T TIGR00887 34 CISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIG-TLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPK 112 (502)
T ss_pred HHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 3444455554432 23344445555555555 899999999999999999999988888887776655432
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH----------------
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD---------------- 142 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------- 142 (204)
..+...+++.+.+.++..+....+++|.+|+++|+++.++......+|..+++.+...+..
T Consensus 113 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (502)
T TIGR00887 113 SVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCT 192 (502)
T ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 4567788888998888889999999999999999999999999999998888887665432
Q ss_pred -------hhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 143 -------LVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 143 -------~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
..+||..+.+.++..++. .+..+++||+++
T Consensus 193 ~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr 229 (502)
T TIGR00887 193 GSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPR 229 (502)
T ss_pred ccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHH
Confidence 236888886655544443 445567899854
No 41
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.77 E-value=1.7e-17 Score=136.53 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccccchhhcccccCCc
Q 041627 36 SLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ 113 (204)
Q Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 113 (204)
+....+..+++.++.|+++||+|||+++..+.++.+++.+++.+.. ..++...++.+++..+..+..+.+++|++|++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 3344444799999999999999999999998888888877766554 34444455556666666778889999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCCcC
Q 041627 114 YRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQGLT 175 (204)
Q Consensus 114 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~ 175 (204)
.|++++|+.+..+++|++++|.+.+.+.+. +...++++.+++.+++.++ ..++|||+++.
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll-~~~LPET~~~~ 740 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLL-ALKLPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH-HHhCCCCcccc
Confidence 999999999999999999999999877664 3445677666666665444 44569997653
No 42
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.76 E-value=1.7e-17 Score=131.50 Aligned_cols=149 Identities=13% Similarity=0.052 Sum_probs=125.7
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHHHHHHHHHhcccc
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIGLALYITFFAPGM 98 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 98 (204)
+++++..+.+...+..... ..+++++.|+++||+|||+.+..+.++..+..+...... ..+++.+++.+.+.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYG-QIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHH-HHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 5788888888888888888 899999999999999999999998888777766654331 45677788889888888
Q ss_pred cccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 99 GPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV-GTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 99 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.+....+++|++|+++|+++.++......+|..+++.+.+.+.+.. +|+..|++.+++.++..+..+...+|++
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999988884 9999999888877766555555555543
No 43
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.76 E-value=3.3e-17 Score=128.79 Aligned_cols=167 Identities=17% Similarity=0.089 Sum_probs=120.9
Q ss_pred hhhhhhhhhHHhhhHHHHHHcC---CCchhhhh---hHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAG---FQSNQLAL---LPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 77 (204)
+.+......+....|.+.++++ .++.+.+. ..+....+ ..++++++|+++||+|||+.+..+..++.++.+..
T Consensus 32 ~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 32 LVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLM-RPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 3445566667777788888874 34443222 22333333 56999999999999999999999999998888877
Q ss_pred HHHH----------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH------
Q 041627 78 SWAF----------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA------ 141 (204)
Q Consensus 78 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------ 141 (204)
.+.+ ..+.+.|++.+.+.++..+....+++|.+|+++|++..++.......|..+++.+...+.
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 190 (432)
T PRK10406 111 ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA 190 (432)
T ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 5543 247778899999988899999999999999999999999887777777776666544333
Q ss_pred --HhhCcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 142 --DLVGTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 142 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
+.+|||..|++.++..++. .......||++
T Consensus 191 ~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~ 222 (432)
T PRK10406 191 ELREWGWRIPFALGAVLAVVA-LWLRRQLDETS 222 (432)
T ss_pred HHhccchHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 2578999998766655444 33334456654
No 44
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.76 E-value=6.7e-17 Score=127.85 Aligned_cols=169 Identities=40% Similarity=0.732 Sum_probs=129.3
Q ss_pred hhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH------
Q 041627 7 FTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA------ 80 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------ 80 (204)
..+.+....+.|.+.++.|++..+.+........+ ..++.++.|+++||+|||+.+..+..+..++.+.+...
T Consensus 297 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (481)
T TIGR00879 297 FTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAV-NFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVT 375 (481)
T ss_pred HhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 34455667888999999999987655555555445 79999999999999999999888877766665555421
Q ss_pred ------H-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHH
Q 041627 81 ------F-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLIL 153 (204)
Q Consensus 81 ------~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 153 (204)
. .......++......+..+....+..|.+|+++|+++.++.+...++++++++.+.+.+.+..+|+..|++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~ 455 (481)
T TIGR00879 376 GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFF 455 (481)
T ss_pred CcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhH
Confidence 1 122223333344455556777788899999999999999999999999999999999999988999899888
Q ss_pred HHHHHHHHHHHHhhccCCCCcCH
Q 041627 154 AGIAVLAVVFVILFVPETQGLTF 176 (204)
Q Consensus 154 ~~~~~i~~~~~~~~~~e~~~~~~ 176 (204)
+++.++..+...++.||+++++.
T Consensus 456 ~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 456 GGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHHHheecccCCCCCh
Confidence 88888877777777788876543
No 45
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=6.6e-17 Score=129.62 Aligned_cols=184 Identities=41% Similarity=0.745 Sum_probs=148.3
Q ss_pred hhhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
+.|+|++|++...+|.+.+.++.|.+... ...+........++..+..++.||+|||+.++.+...+.++.+++....
T Consensus 303 ~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 303 QLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred HHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHH
Confidence 57899999999999999999999988664 3444444555788889999999999999999999999988888766442
Q ss_pred ---------------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 82 ---------------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 82 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
..+....+....+..+..++.|.+.+|.+|.+.|+++.++....+++.+.+....+.......+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~ 460 (513)
T KOG0254|consen 381 VFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGI 460 (513)
T ss_pred HHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 23344556667778888899999999999999999999999999999988877777666666554
Q ss_pred chhhhHHHHHHHHHHH-HHHhhccCCCCcCHHHHHHHHhchh
Q 041627 147 GSTFLILAGIAVLAVV-FVILFVPETQGLTFLEVEQRWKERA 187 (204)
Q Consensus 147 ~~~~~~~~~~~~i~~~-~~~~~~~e~~~~~~~~~~~~~~~~~ 187 (204)
...|..+..++.+... ..++++|||++++.++.++.+....
T Consensus 461 ~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~ 502 (513)
T KOG0254|consen 461 GGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGI 502 (513)
T ss_pred cchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCC
Confidence 4567777777777666 6778899999999999888766543
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.76 E-value=1.9e-17 Score=132.16 Aligned_cols=166 Identities=16% Similarity=0.105 Sum_probs=133.3
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+......+......|.+.+++|.++.+.++..+....+ ..++.++.|+++||+|||+.+..+..+..++.+......
T Consensus 30 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 108 (496)
T PRK03893 30 LLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFIS-RWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGY 108 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 33445556677788999999999999988888888777 899999999999999999999988888887777766654
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAV 161 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (204)
..+...+++.+.+.++..+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+|++.|++.... .+..
T Consensus 109 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~-~~~~ 187 (496)
T PRK03893 109 WTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP-IIFA 187 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH-HHHH
Confidence 556667777788777778888899999999999999999999999999999999999999989999888764333 2222
Q ss_pred HHHHhhccCC
Q 041627 162 VFVILFVPET 171 (204)
Q Consensus 162 ~~~~~~~~e~ 171 (204)
+......||+
T Consensus 188 ~~~~~~~p~~ 197 (496)
T PRK03893 188 LWLRKNLPEA 197 (496)
T ss_pred HHHHHhCCCc
Confidence 3333445654
No 47
>PRK03699 putative transporter; Provisional
Probab=99.75 E-value=3.6e-17 Score=127.17 Aligned_cols=153 Identities=9% Similarity=0.033 Sum_probs=125.2
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHH
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIG 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~ 86 (204)
....+...+|.+.+++|+++.+.+...+....+ ..++.++.|++.||+|||+.+..+..+..++........ ..+..
T Consensus 22 ~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~-~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 100 (394)
T PRK03699 22 LVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAG-ILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSI 100 (394)
T ss_pred HHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHH
Confidence 345677888999999999999988888877776 899999999999999999999988888877777666544 55566
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhhHHHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD-LVGTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~ 162 (204)
.+.+.+.+.+...+....++.|.+|+++|+++.+..+....+++.++|.+.+.+.. ..+|++.|...+.+.++..+
T Consensus 101 ~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 101 AMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 67777777776777778899999999999999998888888888999988887765 46899999887776655543
No 48
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.75 E-value=3.3e-17 Score=126.23 Aligned_cols=170 Identities=16% Similarity=0.080 Sum_probs=125.2
Q ss_pred hhhhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHH-hhHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALS-SLAGVIISLVLLSWA 80 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~~~~~~~~~~~~ 80 (204)
.+....+.....+.+|.+. +++|.++.+.++..+..... ..+.+++.|.++||+|||+.++. +.....++.......
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIV-GIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 4556667777788888776 56899999989888877776 78889999999999999887654 444444444444443
Q ss_pred H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhh--hhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 81 F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGIC--GGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
. +.+...+.+.+.......+....+..|..|++.|+.+ .+.......+|..+++.+.+.+.+..+|++.|++.+.+
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~ 164 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALA 164 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHH
Confidence 3 3344455555555555566667778888887777654 57777778899999999999998889999999988877
Q ss_pred HHHHHHHHHhhccCCCC
Q 041627 157 AVLAVVFVILFVPETQG 173 (204)
Q Consensus 157 ~~i~~~~~~~~~~e~~~ 173 (204)
.++..+...+++||.++
T Consensus 165 ~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 165 FVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHhCCCccc
Confidence 77666666666787543
No 49
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.75 E-value=1e-17 Score=132.85 Aligned_cols=159 Identities=14% Similarity=0.101 Sum_probs=126.2
Q ss_pred hHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-----H--HHH
Q 041627 12 TVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-----F--ISV 84 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----~--~~~ 84 (204)
.+....|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+++..+.++..+..+..... . ..+
T Consensus 47 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 47 NFKAAQNDMISTYGLSTTELGMIGLGFSIT-YGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred ChhhhhHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 344558899999999999999988888777 89999999999999999999988887777766655542 1 566
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh---CcchhhhHHHHHHHHHH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV---GTGSTFLILAGIAVLAV 161 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~ 161 (204)
...+++.+.+.+...+....+++|++|+++|+++.|+......+|..+++.+...+.+.. +|+..|.+.+.+.++..
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~ 205 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIG 205 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Confidence 777888888877778888899999999999999999999999999999888876665543 47777776666665555
Q ss_pred HHHHhhccCC
Q 041627 162 VFVILFVPET 171 (204)
Q Consensus 162 ~~~~~~~~e~ 171 (204)
+..+++.+++
T Consensus 206 i~~~~~~~~~ 215 (467)
T PRK09556 206 FIGLRYGSDS 215 (467)
T ss_pred HHHHHhCCCC
Confidence 5555555544
No 50
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.75 E-value=1.6e-16 Score=126.76 Aligned_cols=167 Identities=11% Similarity=0.069 Sum_probs=112.2
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH-HHHHH--
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL-LSWAF-- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~-~~~~~-- 81 (204)
....++.+..|+|.++++ +|.+..+..........+ ..++.++.|+++||+|||+.+..+.+...+.... .....
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIG-MLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 445678888999999864 688877655444444444 7889999999999999999887776543333222 11111
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAV 158 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (204)
..+...+++.+.+.+...+....+..|.+|++.|+++.|+.+.....++.++|.+.+++.+..+ |+.+++...+..+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 2222333333443333445556778899999999999998777777888899999998887655 5556555555555
Q ss_pred HHHHHHHhhccCCCCc
Q 041627 159 LAVVFVILFVPETQGL 174 (204)
Q Consensus 159 i~~~~~~~~~~e~~~~ 174 (204)
++.+ ..+++||++++
T Consensus 421 i~~~-~~~~~pes~~~ 435 (490)
T PRK10642 421 IGLI-TGVTMKETANR 435 (490)
T ss_pred HHHH-HHHHhccccCC
Confidence 5544 34556998654
No 51
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.75 E-value=7.5e-17 Score=127.49 Aligned_cols=158 Identities=13% Similarity=0.104 Sum_probs=120.4
Q ss_pred HHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH------HHHHH
Q 041627 13 VMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF------ISVIG 86 (204)
Q Consensus 13 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------~~~~~ 86 (204)
+...+|.+.++ |.++.+.++..+..... ..+++++.|+++||+|||+++..+..+.++..+.+.+.. ..+..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~-~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 125 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIA-YGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV 125 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHH-HHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 45667877777 99999988888887777 899999999999999999999999888887777665431 34455
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHH-HHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNF-LTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
.+.+.+.+.+...+.....+.|++|+++|+++.++.+....+|+.+.+++. ..+....+|++.|++.+.+.++..++..
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 566777777666666667888999999999999999888888865444433 3333345899999887777766656666
Q ss_pred hhccCCC
Q 041627 166 LFVPETQ 172 (204)
Q Consensus 166 ~~~~e~~ 172 (204)
+++||++
T Consensus 206 ~~~~~~~ 212 (452)
T PRK11273 206 AMMRDTP 212 (452)
T ss_pred HHccCCH
Confidence 6677764
No 52
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.75 E-value=2e-17 Score=130.21 Aligned_cols=158 Identities=13% Similarity=0.089 Sum_probs=122.9
Q ss_pred HHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH------HHHHH
Q 041627 13 VMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF------ISVIG 86 (204)
Q Consensus 13 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------~~~~~ 86 (204)
+....|.+. +.|.++.+.++..+..... ..+++++.|+++||+|||+.+..+..+..++.+...... ..+..
T Consensus 46 ~~~~~p~~~-~~g~s~~~~g~~~~~~~~~-~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 123 (438)
T TIGR00712 46 FALAMPYLV-EQGFSKGELGFALSAISIA-YGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFV 123 (438)
T ss_pred HHhhhHHHH-HcCCCHhHhHHHHHHHHHH-HHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHH
Confidence 345566655 4699999988888888777 899999999999999999998888877777766654321 33445
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhhHHHHHHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD-LVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
.+.+.+.+.+...+.....+.|++|+++|+++.++.+....+++.+++.+.+...+ ..+|+..|++.+++.++..+...
T Consensus 124 ~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 124 LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 56666766666667777888999999999999999999999999998888765444 46899999988888777666666
Q ss_pred hhccCCC
Q 041627 166 LFVPETQ 172 (204)
Q Consensus 166 ~~~~e~~ 172 (204)
++.||++
T Consensus 204 ~~~~~~~ 210 (438)
T TIGR00712 204 AMMRDTP 210 (438)
T ss_pred HhccCCH
Confidence 6677753
No 53
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.75 E-value=4.7e-17 Score=126.46 Aligned_cols=148 Identities=17% Similarity=0.046 Sum_probs=126.4
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
.+...+.+|.+.+++|.+..+.++..+....+ ..+++++.|+++||+|||+++..+..+.+++.+...+.+ ..+...
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~-~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVT-MGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 35677889999999999999999988888888 799999999999999999999999999999999888766 666777
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CcchhhhHHHHHHHH
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV-GTGSTFLILAGIAVL 159 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i 159 (204)
+++.+.+.+...+....++.|.+| ++|+++.+........|..+++.+.+.+.+.. +|+..+...+...++
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 888888888777777888899987 78999999999988899999999998887775 788877665544433
No 54
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.74 E-value=9.8e-17 Score=127.38 Aligned_cols=157 Identities=15% Similarity=0.020 Sum_probs=130.3
Q ss_pred hhhhhhhhhHHhhhHHHHHH---cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQM---AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSW 79 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~ 79 (204)
+.+..++|++..++|.|+++ +|++..+.+...+..... ..++.+++|+++|| +|||+++..+..+..++.+.+..
T Consensus 20 ~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~-~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~ 98 (475)
T TIGR00924 20 LWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSAL-VYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM 98 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH-HHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh
Confidence 45567889999999999876 799999988888888777 89999999999999 89999999999988888777665
Q ss_pred HH--HHHHHHHHHHHHhcccccccchhhcccccCCcc---hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHH
Q 041627 80 AF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQY---RGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILA 154 (204)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (204)
.. ..+...+.+.+.+.+...+....+++|.+|+++ |+++.++.+...++|+.++|.+.+.+.+..+|+..|...+
T Consensus 99 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~ 178 (475)
T TIGR00924 99 SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAA 178 (475)
T ss_pred cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 43 344445566677777777888899999998764 8889999999999999999999999999899999988866
Q ss_pred HHHHHHH
Q 041627 155 GIAVLAV 161 (204)
Q Consensus 155 ~~~~i~~ 161 (204)
...+++.
T Consensus 179 ~~~~~~~ 185 (475)
T TIGR00924 179 VGMVIGL 185 (475)
T ss_pred HHHHHHH
Confidence 5554443
No 55
>TIGR00898 2A0119 cation transport protein.
Probab=99.74 E-value=2.2e-17 Score=132.19 Aligned_cols=153 Identities=24% Similarity=0.240 Sum_probs=125.3
Q ss_pred hhhHHHHHHcCCC---chhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHH
Q 041627 15 YYSPTIVQMAGFQ---SNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLAL 89 (204)
Q Consensus 15 ~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (204)
.+.|.+.++++++ +.+.++..+....+ ..++.++.|+++||+|||+++..+.++..++.+...+.. ..+.+.++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g-~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVG-VLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHH-HHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 5667788889998 77777777887777 899999999999999999999998888888777766654 66777888
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhcc
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVP 169 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 169 (204)
+.+.+.++..+....++.|.+|+++|+++.++......+|.++++.+...+.+ |++.+++.++..++..+. .+++|
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~-~~~~~ 264 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLL-SWFVP 264 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHH-HHhcC
Confidence 88888888889999999999999999999999988888888888877655443 888888877776665444 46788
Q ss_pred CCC
Q 041627 170 ETQ 172 (204)
Q Consensus 170 e~~ 172 (204)
|++
T Consensus 265 esp 267 (505)
T TIGR00898 265 ESP 267 (505)
T ss_pred CCh
Confidence 874
No 56
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.74 E-value=1.3e-16 Score=121.43 Aligned_cols=160 Identities=21% Similarity=0.230 Sum_probs=135.6
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
.+....+.+......|.+.++.|.++.+.+...+..... ..++.++.|+++||+|||+.+..+..+..++........
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 86 (352)
T cd06174 8 FFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLG-YALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASS 86 (352)
T ss_pred HHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhcc
Confidence 345566677888899999999999999988887777777 899999999999999999999998888888877766554
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
......+.+.+.+.+...+....+..|.+|+++|++..++......+|..+++.+.+.+.+..+|+..+++.+...++.
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLL 166 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 5566667777777777888889999999999999999999999999999999999999999888988888777666655
Q ss_pred HHH
Q 041627 161 VVF 163 (204)
Q Consensus 161 ~~~ 163 (204)
.+.
T Consensus 167 ~~~ 169 (352)
T cd06174 167 ALL 169 (352)
T ss_pred HHH
Confidence 443
No 57
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.74 E-value=1.4e-16 Score=126.79 Aligned_cols=151 Identities=16% Similarity=0.036 Sum_probs=124.5
Q ss_pred hhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
+.+..++|++..+++.|++ ++|.++.+.++..+.+... .....+++|+++|| +|||+++..+.++..++.+.+....
T Consensus 24 ~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~-~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~ 102 (489)
T PRK10207 24 LWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAAL-VYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL 102 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456778888888888876 4899998877777777666 67778899999999 9999999999999999888777654
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCc--chhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ--YRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAG 155 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (204)
..+.+.+.+.+.+.+...+...+++.|.+|++ +|++++++.+...++|..++|.+.+++.+..||++.|++..+
T Consensus 103 ~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 103 LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 22334566677777778888889999999887 457789999999999999999999999999999999887544
No 58
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.73 E-value=7.1e-17 Score=127.68 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=122.6
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHH-H
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIG-L 87 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 87 (204)
+.+..+.|.+.+++|.+.++.++..+..... ..++.++.|+++||+|||+.++.+..+..+..+.+.+.. ..+.. .
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~-~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 114 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAV-LYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTA 114 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHH-HHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4456678999999999999988888887766 688899999999999999999988888877777665554 33332 2
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
+++.+.+.+...+....++.|++| ++|+++.++.+....++..++|.+.+.+.+..||++.|++.+++.++..+...+.
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 355555555444555677788886 7899999999999999999999999999999999999999888776655444333
Q ss_pred cc
Q 041627 168 VP 169 (204)
Q Consensus 168 ~~ 169 (204)
.+
T Consensus 194 ~~ 195 (455)
T TIGR00892 194 RP 195 (455)
T ss_pred CC
Confidence 33
No 59
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.73 E-value=3.3e-16 Score=123.62 Aligned_cols=157 Identities=13% Similarity=-0.017 Sum_probs=120.7
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-cchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
....++|++..++|.++++ +|+++.+.+...+..... ..++.+++|+++||+ |||+.+.++.++..++.+.+....
T Consensus 20 ~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~-~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~ 98 (493)
T PRK15462 20 WEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSL-VYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI 98 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3456788999999999865 799999877777776655 788999999999999 999999999888887766554321
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCc--chhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ--YRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIA 157 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (204)
........+...+.+...+...++++|.+|++ +|.+++++.+...++|+.++|.+.+.+.+..||+..|...++..
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm 178 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM 178 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH
Confidence 11222222223334444566678999999976 69999999999999999999999999999999999998766554
Q ss_pred HHHHH
Q 041627 158 VLAVV 162 (204)
Q Consensus 158 ~i~~~ 162 (204)
+++.+
T Consensus 179 ~l~li 183 (493)
T PRK15462 179 IAGLV 183 (493)
T ss_pred HHHHH
Confidence 44433
No 60
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.73 E-value=1.3e-16 Score=126.17 Aligned_cols=159 Identities=18% Similarity=0.129 Sum_probs=124.3
Q ss_pred hHHhhhHHHHHHcCCC--------chhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 12 TVMYYSPTIVQMAGFQ--------SNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
.+....|.+..+.+.+ ..+.++..+....+ ..+++++.|+++||+|||+.+..+..+..++........
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 124 (481)
T TIGR00879 46 VIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVG-GFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFA 124 (481)
T ss_pred hhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHH-HHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3445556666666655 77778888887777 899999999999999999999998888887777664433
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHH---HHHHHhhCcchhhhHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNF---LTVADLVGTGSTFLILAG 155 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~ 155 (204)
+.+++.+++.+.+.+...+....++.|++|+++|+++.++.+....+|..+++.+. ....+..+|++.|++.+.
T Consensus 125 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 125 LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 35777788888888888888889999999999999999999999999999999988 444456789998888554
Q ss_pred HHHHHHHHHHhhccCCC
Q 041627 156 IAVLAVVFVILFVPETQ 172 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~~ 172 (204)
..++. +...+++||++
T Consensus 205 ~~~~~-~~~~~~l~~~~ 220 (481)
T TIGR00879 205 PAGLL-FLGLFFLPESP 220 (481)
T ss_pred HHHHH-HHHHhcCCCCh
Confidence 44433 44455677764
No 61
>PRK15075 citrate-proton symporter; Provisional
Probab=99.72 E-value=1.8e-16 Score=124.77 Aligned_cols=152 Identities=19% Similarity=0.125 Sum_probs=116.5
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhH-HHHHHHH----HHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLP-SLVVAGT----NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 77 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~----~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 77 (204)
.+.++.....+....|.+.++++.++.+.+.+. +...... ..+++++.|+++||+|||+.++.+..+..++...+
T Consensus 24 ~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~ 103 (434)
T PRK15075 24 NFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI 103 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Confidence 455666777888999999999998877654433 2222221 24688999999999999999999999888888877
Q ss_pred HHHH--H--------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH-------
Q 041627 78 SWAF--I--------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV------- 140 (204)
Q Consensus 78 ~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------- 140 (204)
.+.+ . .+.+.+++.+.+.+...+....+++|++|+++|+++.++.....+++..+++.+.+.+
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~ 183 (434)
T PRK15075 104 AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA 183 (434)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 6654 2 2466778888887777777789999999999999999998888887777777666554
Q ss_pred -HHhhCcchhhhHHH
Q 041627 141 -ADLVGTGSTFLILA 154 (204)
Q Consensus 141 -~~~~~~~~~~~~~~ 154 (204)
.+.+|||+.|++..
T Consensus 184 ~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 184 QMAEWGWRIPFLIGC 198 (434)
T ss_pred HHhccchHHHHHHHH
Confidence 24678998887643
No 62
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.9e-16 Score=124.31 Aligned_cols=149 Identities=16% Similarity=0.155 Sum_probs=135.1
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHHHHHHHHHhcccc
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIGLALYITFFAPGM 98 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 98 (204)
++++++++.+++.+....+ .+++.+..|+++||+|-|+++..+.++.++..++..... +.+++.|++.|.+.+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G-~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWG-YILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred eecCCHHHHHHHHHHHHHH-HHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 5788889999999999999 899999999999999999999999999998888877665 56688899999999999
Q ss_pred cccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hCcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 99 GPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL-VGTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 99 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.+....+.+++.|+++|++..++......+|.++..++.|.+.+. .||+..|++.+++.++..++.+++..|++
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999998 99999999999999988777666665553
No 63
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.72 E-value=2.6e-16 Score=122.27 Aligned_cols=158 Identities=14% Similarity=0.119 Sum_probs=122.4
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISVIGLALY 90 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (204)
.......+.+.++.+.++.+.++..+..... ..+..++.|+++||+|||++++.+..+..++.+.+..... ....+++
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~-~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~-~~~~r~l 97 (393)
T PRK11195 20 NALLFAAIALLKELHYPDWSQPLLQMFFVLA-YIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH-PLLAYGL 97 (393)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH-HHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3445556667788998888878877777777 8999999999999999999999998888776665544332 2566777
Q ss_pred HHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccC
Q 041627 91 ITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 91 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 170 (204)
.+.+.+...|...+++.|++|+++|+++.++......++..++|.+.+.+.+.. |+..+.+.+...++. .+..+.+||
T Consensus 98 ~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~ 175 (393)
T PRK11195 98 VGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPR 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 888888888999999999999999999999999999999999999999887753 555555444333333 334456676
Q ss_pred CC
Q 041627 171 TQ 172 (204)
Q Consensus 171 ~~ 172 (204)
++
T Consensus 176 ~~ 177 (393)
T PRK11195 176 LG 177 (393)
T ss_pred Cc
Confidence 53
No 64
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.72 E-value=3.7e-16 Score=121.59 Aligned_cols=154 Identities=17% Similarity=0.063 Sum_probs=122.5
Q ss_pred hhhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 4 FQQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
+....+.....+.+|.+. +++|.++.+.++..+..... ..+++++.|+++||+|||+++..+.++..++........
T Consensus 25 ~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~-~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 103 (399)
T PRK05122 25 FISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLA-TLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGL 103 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH-HHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhh
Confidence 344455566777888764 56899999989888888877 899999999999999999999998887766554433221
Q ss_pred ---------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhH
Q 041627 82 ---------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLI 152 (204)
Q Consensus 82 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 152 (204)
..+...+++.+.+.+...+....+..|..|+++|+++.++......+|..+++.+.+.+.+..+|+..+++
T Consensus 104 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 183 (399)
T PRK05122 104 LAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLL 183 (399)
T ss_pred hhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 34566777888877777777788889999999999999998888888989999999999898999877766
Q ss_pred HHHHHH
Q 041627 153 LAGIAV 158 (204)
Q Consensus 153 ~~~~~~ 158 (204)
......
T Consensus 184 ~~~~~~ 189 (399)
T PRK05122 184 IMLLAL 189 (399)
T ss_pred HHHHHH
Confidence 554443
No 65
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.72 E-value=2e-16 Score=123.31 Aligned_cols=164 Identities=10% Similarity=-0.056 Sum_probs=117.7
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH---H--
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW---A-- 80 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~-- 80 (204)
...+.+....+.|.+.+++|.++.+.++..+..... ..++.++.|+++||+|||+.+..+..+..++...... .
T Consensus 25 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
T TIGR00897 25 FMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIA-AAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA 103 (402)
T ss_pred HHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 344445566788888899999999989988888777 8999999999999999999999988887776554321 1
Q ss_pred H-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHH-HHHHHHHHHHHHhhCcchhhhHHHHHHH
Q 041627 81 F-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISN-LIVAQNFLTVADLVGTGSTFLILAGIAV 158 (204)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (204)
. ..+...+.+.+.+.....+.......|.+|+++|+++.|+......+|. .+++.+.+.+.+..||+..++.......
T Consensus 104 ~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 183 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVL 183 (402)
T ss_pred cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 1 3344556655555444445555677889999999999999999988886 5788888888777886555554443333
Q ss_pred HHHHHHHhhccC
Q 041627 159 LAVVFVILFVPE 170 (204)
Q Consensus 159 i~~~~~~~~~~e 170 (204)
+..++..+..++
T Consensus 184 ~~~~~~~~~~~~ 195 (402)
T TIGR00897 184 TGGVIALFSNKD 195 (402)
T ss_pred HHHHHHHhccCC
Confidence 333333343443
No 66
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.71 E-value=2.6e-16 Score=124.95 Aligned_cols=161 Identities=16% Similarity=0.198 Sum_probs=110.9
Q ss_pred hhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 4 FQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
++....+++...|+|.|+++ +|++..+.+........+ ..++.++.|+++||+|||+.+.....+..+.........
T Consensus 268 ~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~-~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~ 346 (467)
T PRK09556 268 IFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIG-ALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHA 346 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 34445556778899988865 899998877766666666 899999999999999999876654433333222211111
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHH-HHHHHHHHHHHHHH------------hhC
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWI-SNLIVAQNFLTVAD------------LVG 145 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~------------~~~ 145 (204)
.......+..+....+..........|.+|++.||++.|+.+..+++ |+.++|.+.|.+.+ ..+
T Consensus 347 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~ 426 (467)
T PRK09556 347 TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG 426 (467)
T ss_pred CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC
Confidence 22223333334333222222335667999999999999999999987 66999999999999 567
Q ss_pred cchhhhHHHHHHHHHHHHHH
Q 041627 146 TGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~~~ 165 (204)
|+..|++..+..+++.+...
T Consensus 427 ~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 427 WAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 88888887666666654433
No 67
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.71 E-value=4e-16 Score=121.78 Aligned_cols=154 Identities=12% Similarity=0.009 Sum_probs=124.7
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----HH
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IS 83 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~ 83 (204)
......+..|.+.+++|.++.+.++..+....+ ..+++++.|++.||+|||+.+..+..+..++........ ..
T Consensus 18 ~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g-~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~ 96 (410)
T TIGR00885 18 ANDITNPMVPQFQQAFTLTAFQAALVQSAFYGG-YFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTL 96 (410)
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 334556888999999999999988888888777 899999999999999999999999998888877654321 44
Q ss_pred HHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH---------------------
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD--------------------- 142 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------- 142 (204)
+...+++.+.+.+...+....++.+..|+++|++..++.+....+|..+++.+.+.+..
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 176 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSA 176 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHH
Confidence 56667777777777778888889999999999999999999999999999998876642
Q ss_pred -----hhCcchhhhHHHHHHHHHHHH
Q 041627 143 -----LVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 143 -----~~~~~~~~~~~~~~~~i~~~~ 163 (204)
..+|+.+|++.+.+.++..+.
T Consensus 177 ~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 177 IKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235888888877766655433
No 68
>PRK12382 putative transporter; Provisional
Probab=99.71 E-value=5e-16 Score=120.63 Aligned_cols=149 Identities=12% Similarity=0.047 Sum_probs=116.1
Q ss_pred hhhhhhhHHhhhHHH-HHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH-----
Q 041627 6 QFTGINTVMYYSPTI-VQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW----- 79 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----- 79 (204)
.+.+.....+.+|.+ .+++|.+..+.+...+..... ..+++++.|+++||+|||+.+..+.+...++.+....
T Consensus 27 ~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~-~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 105 (392)
T PRK12382 27 TYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLA-TVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILP 105 (392)
T ss_pred HHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHH-HHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccc
Confidence 344455666777765 467999999999999988888 8999999999999999999998887766654432211
Q ss_pred -----HHHHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHH
Q 041627 80 -----AFISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILA 154 (204)
Q Consensus 80 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (204)
....+.+.+.+.+.+.+...+....+..|..|+++|+++.++.......+..++|.+.+.+.+..+|+..+.+..
T Consensus 106 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 185 (392)
T PRK12382 106 VSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTM 185 (392)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 114556667777777766666677788999999999999999998888899999999998888889886655443
Q ss_pred H
Q 041627 155 G 155 (204)
Q Consensus 155 ~ 155 (204)
.
T Consensus 186 ~ 186 (392)
T PRK12382 186 V 186 (392)
T ss_pred H
Confidence 3
No 69
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.70 E-value=1.1e-15 Score=119.67 Aligned_cols=167 Identities=17% Similarity=0.118 Sum_probs=125.1
Q ss_pred hhhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-
Q 041627 3 AFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA- 80 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~- 80 (204)
++..+...+.+.+..+.+.+ ++|+++++.+++.++.... ..+..++.|++.||+|.|+++..+.++..+..+...+.
T Consensus 43 f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~-~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~ 121 (462)
T PRK15034 43 LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVS-GALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAV 121 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666667777777766 7999999999988888888 78889999999999999999999998888888777764
Q ss_pred ----H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH-----HhhC----
Q 041627 81 ----F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA-----DLVG---- 145 (204)
Q Consensus 81 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~---- 145 (204)
+ ..+.+.+++.+.. ++..+.....+++++|+++||++.|+....+++|..+++.+.+.+. ..+|
T Consensus 122 ~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~ 200 (462)
T PRK15034 122 QNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGV 200 (462)
T ss_pred cccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 2 5666777777775 5566778889999999999999999998777778777666665433 2222
Q ss_pred ---------cchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 146 ---------TGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 146 ---------~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
|+...++...+.++..++.++..++.
T Consensus 201 ~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 201 PQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44555566666656655555555543
No 70
>PRK09952 shikimate transporter; Provisional
Probab=99.70 E-value=9.2e-16 Score=120.84 Aligned_cols=165 Identities=13% Similarity=0.031 Sum_probs=117.2
Q ss_pred hhhhhhhHHhhhHHHH-HHc--CCCchhhhhhHHH----HHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH
Q 041627 6 QFTGINTVMYYSPTIV-QMA--GFQSNQLALLPSL----VVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS 78 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~~--g~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 78 (204)
++.....+....|.+. +++ +.++.+ +...+. .......+++++.|+++||+|||+.+..+..++.++.+.+.
T Consensus 34 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~ 112 (438)
T PRK09952 34 DWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIG 112 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHh
Confidence 3344444555555443 344 566553 544321 22233678889999999999999999999999988888776
Q ss_pred HHH--H--------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH------
Q 041627 79 WAF--I--------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD------ 142 (204)
Q Consensus 79 ~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------ 142 (204)
+.+ . .+...+++.+.+.++..+....+++|++|+++|++..+.......+|..+++.+...+..
T Consensus 113 ~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~ 192 (438)
T PRK09952 113 LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQ 192 (438)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 654 1 366778889999988888888999999999999999998888888888887766655442
Q ss_pred --hhCcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 143 --LVGTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 143 --~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.++||..|++.+...++. +......||++
T Consensus 193 ~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 193 FLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred hhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 478999988766554332 23333456654
No 71
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.69 E-value=1.5e-15 Score=117.69 Aligned_cols=156 Identities=9% Similarity=0.013 Sum_probs=129.5
Q ss_pred HHhhhHHHHHHcCCCchh-hhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHH
Q 041627 13 VMYYSPTIVQMAGFQSNQ-LALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLAL 89 (204)
Q Consensus 13 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (204)
.....|.+.+++|+++++ .+.+.+..... ..+..++.|+++||+|.|+++..+.+...+...+..+.. ..+.+.++
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ys-Yal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYS-HLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEV 123 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHH-HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788899999999 89999999988 999999999999999999999999999999888888764 77888899
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHH--HHHHHHHHHHHHhh
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLIL--AGIAVLAVVFVILF 167 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~ 167 (204)
+.|.+.+... ....++..++|+++|+++.|+.+....+|.++++++.+. ...+||+....+. ........++..++
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988888 888999999999999999999999999999999999998 5678887654332 12222223344556
Q ss_pred ccCC
Q 041627 168 VPET 171 (204)
Q Consensus 168 ~~e~ 171 (204)
+|..
T Consensus 202 LP~~ 205 (511)
T TIGR00806 202 LKRP 205 (511)
T ss_pred CCCC
Confidence 7744
No 72
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.68 E-value=4e-15 Score=118.91 Aligned_cols=156 Identities=15% Similarity=0.015 Sum_probs=119.5
Q ss_pred hhhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
+++..++|.+..+++.++ +++|+++.+.+...+..... .....+++|+++|| +|||+.+..+..+..++...+....
T Consensus 31 ~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~-~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~ 109 (500)
T PRK09584 31 LWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSAL-VYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 456677888999999887 56899988866666555444 34556789999999 5999999999888888777666543
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcc--hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQY--RGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
..+...+.+.+.+.+...+....++.|++|+++ |..+.++.+...++|+.++|.+.+++.+..||++.|.+.++.
T Consensus 110 ~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~ 189 (500)
T PRK09584 110 HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVG 189 (500)
T ss_pred ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 233344555666666677777789999998654 456788889999999999999999999999999999886654
Q ss_pred HHHH
Q 041627 157 AVLA 160 (204)
Q Consensus 157 ~~i~ 160 (204)
..++
T Consensus 190 ~~i~ 193 (500)
T PRK09584 190 MLIT 193 (500)
T ss_pred HHHH
Confidence 4443
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.68 E-value=9.8e-16 Score=119.94 Aligned_cols=166 Identities=17% Similarity=0.160 Sum_probs=126.1
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH----
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA---- 80 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---- 80 (204)
....+........|.+.++.+.++.+.+...+..... ..+++++.|+++||+|||+.+..+..+..++.......
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~-~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 28 ISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGA-MFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 3445556677888999999888988888888888777 79999999999999999999888776666555443321
Q ss_pred -H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHH
Q 041627 81 -F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIA 157 (204)
Q Consensus 81 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (204)
. +.+...+++.+.+.+...+....++.|..|+++|+++.++......+|..+++.+.+.+.+..+|++.+++.+...
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1 3444555565665555556667888999999999999999999999999999999999988889988887766655
Q ss_pred HHHHHHHHhhccCCC
Q 041627 158 VLAVVFVILFVPETQ 172 (204)
Q Consensus 158 ~i~~~~~~~~~~e~~ 172 (204)
++..+ ..+.+||++
T Consensus 187 ~~~~~-~~~~l~~~~ 200 (417)
T PRK10489 187 FITLL-PLLRLPALP 200 (417)
T ss_pred HHHHH-HHHhCCCCC
Confidence 55433 344566653
No 74
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=8.7e-16 Score=122.72 Aligned_cols=147 Identities=16% Similarity=0.153 Sum_probs=108.9
Q ss_pred hHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHH
Q 041627 12 TVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIG 86 (204)
Q Consensus 12 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~ 86 (204)
....++|.+.+ +.|++..+.+...+....+ ..++.++.|+++||+|||+.+..+..+..+..+...... .....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~-~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFG-AAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 35578899985 7899999888888777776 799999999999999999988776655554433322211 12222
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
..+..+....+..+..+.++.|.+|+++|++++++.+....+|+.++|.+.+.+.+.+|++..+...+....+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 2233333344445666788899999999999999999999999999999999999999987776555544433
No 75
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.67 E-value=5.3e-15 Score=115.02 Aligned_cols=169 Identities=14% Similarity=0.111 Sum_probs=123.2
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HH
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IS 83 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~ 83 (204)
+...+++....|.|.+.+++|.+..+.+...+....+ ..++.++.|++.||+|||+.+..+..+..++........ ..
T Consensus 216 ~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~-~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 294 (393)
T PRK09705 216 LINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLG-QAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQL 294 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchH
Confidence 3445667888999999999999988878777777666 899999999999999999988877666655554433222 11
Q ss_pred HHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAVLAV 161 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ 161 (204)
......+.+...+...+.......+..+ +++|++..++.+..+.+++.++|.+.+++.+..| +...+.+.....++..
T Consensus 295 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 295 PVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 1112233344455555655555566664 6789999999999999999999999999999987 5556666666666665
Q ss_pred HHHHhhccCCCCc
Q 041627 162 VFVILFVPETQGL 174 (204)
Q Consensus 162 ~~~~~~~~e~~~~ 174 (204)
+....+.||++++
T Consensus 375 ~~~~~~~~~~~~~ 387 (393)
T PRK09705 375 IITLRFAPARFPQ 387 (393)
T ss_pred HHHHHhccccccc
Confidence 6666778888654
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.67 E-value=2.1e-15 Score=118.14 Aligned_cols=162 Identities=12% Similarity=0.099 Sum_probs=120.1
Q ss_pred hhHHhhhHHHHHHcCCCc--------hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 11 NTVMYYSPTIVQMAGFQS--------NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
.....+.|.+.++.|.++ ...+...+..... ..++.++.|+++||+|||+++..+.++..+.........
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~-~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~ 303 (418)
T TIGR00889 225 QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFS-EIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP 303 (418)
T ss_pred HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc
Confidence 344566677777777654 3335555555555 788999999999999999999988887777655444321
Q ss_pred -----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHH-HHHHHHHHHHHHHHHHHHHhh------Ccchh
Q 041627 82 -----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSA-TVNWISNLIVAQNFLTVADLV------GTGST 149 (204)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~------~~~~~ 149 (204)
..+.+..++.+...+...+....++.|.+|+++|+++.|+.+ ....+|+.++|.+.|.+.+.. ||+..
T Consensus 304 ~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~ 383 (418)
T TIGR00889 304 EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM 383 (418)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH
Confidence 122333445555555555666788999999999999999997 567789999999999998874 57888
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCC
Q 041627 150 FLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 150 ~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
|...+++.+++.++..++.||+++
T Consensus 384 f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 384 WLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccc
Confidence 888888877777777788887743
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.66 E-value=1.7e-15 Score=118.62 Aligned_cols=167 Identities=15% Similarity=0.125 Sum_probs=124.1
Q ss_pred hhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 11 NTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
+....+.|.+.++ +|.++.+.+...+....+ ..++.++.+++.||.++++.+..+..+..++.+.....+ ......
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g-~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLG-AALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLC 318 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHH-HHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 4566788888888 899888878777776666 799999999999998877777776666655554444333 222333
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
.++.+.+.+...+...+++.|..|++.|+++.|+......+|+.+++.+.+.+.+..|.+..++..+.+.++..++....
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 319 LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 33444444444455667889999999999999999999999999999999999999998778877777766666666667
Q ss_pred ccCCCCcCHHH
Q 041627 168 VPETQGLTFLE 178 (204)
Q Consensus 168 ~~e~~~~~~~~ 178 (204)
+||.++++.+|
T Consensus 399 ~~~~~~~~~~~ 409 (417)
T PRK10489 399 LGELRRFRQTP 409 (417)
T ss_pred ccccccccccc
Confidence 78876655443
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.66 E-value=3.8e-15 Score=114.26 Aligned_cols=160 Identities=16% Similarity=0.141 Sum_probs=116.4
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-----cchHhH-HHhhHHHHHHHHHHHHHH--
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-----GRKKLA-LSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~~-~~~~~~~~~~~~~~~~~~-- 81 (204)
+....+-.|.+.++.|++.++.+..... ... .. ..+++|+++||+ ||||.+ +.+.+...+....+.+..
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~-~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLP-YS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHH-HH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 3455677899999999999998877433 333 23 389999999998 898875 455555555544444331
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--------cchhh
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG--------TGSTF 150 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~ 150 (204)
+.+....++.+.+.....+...+++.|++|+++|+++.++......+|..+++.+.+.+.+..+ |+..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 2333334444555555567778899999999999999999999999999999999988888888 99999
Q ss_pred hHHHHHHHHHHHHHHhhccCCC
Q 041627 151 LILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 151 ~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
++.++..++..+...+..||++
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCC
Confidence 8877766665544444557753
No 79
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=3.4e-15 Score=120.12 Aligned_cols=145 Identities=23% Similarity=0.259 Sum_probs=121.8
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhccccccc
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPV 101 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 101 (204)
+..+........++...+ ..+|++++|+++||+|||++++.+..+..++.+..+++. ..+.+.+++.|++..+...+
T Consensus 113 ~c~~~~~~~~~~s~~~~G-~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLG-VLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred eeCcHhHHHHHHHHHHHH-HHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHH
Confidence 444555545555666666 899999999999999999999999999999988877776 78888999999999999999
Q ss_pred chhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 102 PWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 102 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
.+.+..|+.++++|+.+..+ ......++.+++...+++.. +||+.+++...+..+..++ ++..||+++
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChH
Confidence 99999999999999999999 88888888888998888877 8999998888777766544 555568754
No 80
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.66 E-value=5.3e-15 Score=115.02 Aligned_cols=168 Identities=12% Similarity=0.080 Sum_probs=115.1
Q ss_pred hhhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHH-HhhHHHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAF 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~~~ 81 (204)
+....+.....+.+|.+. +++|.++.+.+...+.........+.+++++ +||+|||+.++ .+.+...+.........
T Consensus 25 ~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 103 (393)
T PRK15011 25 FLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNR 103 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 444455566777788765 5689999998888776656545666666676 99999998754 44444444444444433
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchh--hhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRG--ICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIA 157 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (204)
+.+.+...+.+.......+....+..|..|++.|. ...++.+....+|..++|.+.+.+.+..||+..|+..+...
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~ 183 (393)
T PRK15011 104 NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAF 183 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHH
Confidence 33333444444444455566667777777666553 33467778888999999999999999999999998888777
Q ss_pred HHHHHHHHhhccCCC
Q 041627 158 VLAVVFVILFVPETQ 172 (204)
Q Consensus 158 ~i~~~~~~~~~~e~~ 172 (204)
++..+...+++||.+
T Consensus 184 ~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 184 IVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHhhcCccC
Confidence 776666666678764
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.66 E-value=4.4e-15 Score=113.86 Aligned_cols=148 Identities=16% Similarity=0.099 Sum_probs=115.7
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.++....+.+|.+.+++|.++.+.++..+....+ ..++.++.|+++||+|||+.+..+.....++.... ... ..+.
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLC-FAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 3445678899999999999999989888888887 89999999999999999999998887766665554 222 4455
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--cchhhhHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG--TGSTFLILAGIAV 158 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 158 (204)
..+++.+.+.+...+....++.|.+| ++|+++.++......+|..+++.+.+.+.+..+ |+..+...+...+
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 56666666666656666677888886 689999999999999999999998888776653 7777766554433
No 82
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.66 E-value=1.8e-15 Score=118.00 Aligned_cols=157 Identities=17% Similarity=0.210 Sum_probs=114.3
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
......+....|.|.+.++.|.++.+.+........+ ..++.++.|+++||+|||+.+..+.....++........ .
T Consensus 231 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (406)
T PRK11551 231 FTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIG-GALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFA 309 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 3344566777889999999999988877777776666 899999999999999999988776555554444333322 3
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc-chhhhHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT-GSTFLILAGIAVLAV 161 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 161 (204)
......++.+....+..+....+..|.+|+++|+++.|+.+....+++.++|.+.+.+.+..++ ...++......+++.
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 3333444455555556677788999999999999999999999999999999999998886553 333444333333433
Q ss_pred H
Q 041627 162 V 162 (204)
Q Consensus 162 ~ 162 (204)
+
T Consensus 390 ~ 390 (406)
T PRK11551 390 L 390 (406)
T ss_pred H
Confidence 3
No 83
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=1.2e-15 Score=101.21 Aligned_cols=129 Identities=22% Similarity=0.251 Sum_probs=104.6
Q ss_pred HHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhh
Q 041627 43 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGG 120 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 120 (204)
..++.++.|++.||+|||+.+..+.....++.+...... +.......+.+...+...+....+..|.+|+++|++..+
T Consensus 11 ~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (141)
T TIGR00880 11 QLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALG 90 (141)
T ss_pred HHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHH
Confidence 688999999999999999999888777777666555433 445555666666666677788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 121 MSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
+.+....++..+++.+.+.+.+..+|+..+++......+..+...+..||+
T Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 91 LMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999998888898888887777776666665555653
No 84
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.65 E-value=5.1e-15 Score=113.77 Aligned_cols=149 Identities=14% Similarity=0.080 Sum_probs=114.0
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIG 86 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~ 86 (204)
.....+.+.+.++.|.++.+.+...+..... ..+++++.|+++||+|||+.+..+..+..++........ .....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T TIGR00890 222 LLLIGLYKPYGQSLGLSDGFLVLAVSISSIF-NGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLA 300 (377)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHH
Confidence 3445566677788888887767666666665 899999999999999999998887777776665554432 11222
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
...+.+...+...+....+..|.+|+++|+++.|+.+....+|+.++|.+.+.+.+..||+..+.+.+++.+++
T Consensus 301 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 301 TVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 33444555555566677889999999999999999999999999999999999999999988887766655544
No 85
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.65 E-value=5.4e-15 Score=114.50 Aligned_cols=139 Identities=14% Similarity=0.043 Sum_probs=115.7
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
....+.....+++|.+.+++|.++.+.++..+....+ ..+++++.|+++||+|||+.+..+..+..++........ +
T Consensus 17 ~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~-~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~ 95 (381)
T PRK03633 17 LLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTG-NLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFW 95 (381)
T ss_pred HHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3445566778999999999999999999988888877 899999999999999999999998888888777666554 5
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
.+.+.+++.+.+.+...+.......+..|+++|+++.+.......+|..+++.+.+.+.+..
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 96 SWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 56667777777776666666666778889999999999999999999999999988776553
No 86
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.65 E-value=4.4e-15 Score=112.27 Aligned_cols=165 Identities=18% Similarity=0.132 Sum_probs=134.7
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
...++.++.+....+.+.+++|+|+.|.+++..+.... +.+..++.|.+.||+|.|+....+.++..+.++...+..
T Consensus 24 ~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~-GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~ 102 (417)
T COG2223 24 DVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILV-GALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY 102 (417)
T ss_pred HHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHH-hHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC
Confidence 34455556666677777788999999999888888888 899999999999999999999999999888888877765
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC---cchhhhHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG---TGSTFLILAG 155 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~ 155 (204)
+.++.+.++.+. .++..++...++++++|++++|++.|+.. .+|+|..+...+.+.+....+ |+....+...
T Consensus 103 ~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~ 180 (417)
T COG2223 103 PSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVV 180 (417)
T ss_pred CchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 245555555444 45566777799999999999999999999 899999999999999999888 8888888777
Q ss_pred HHHHHHHHHHhhccCC
Q 041627 156 IAVLAVVFVILFVPET 171 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~ 171 (204)
..++..+..++...|.
T Consensus 181 ~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 181 ALAIAAVLAWLGMNDV 196 (417)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 7777777766666554
No 87
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.64 E-value=1.3e-14 Score=112.25 Aligned_cols=166 Identities=18% Similarity=0.114 Sum_probs=118.4
Q ss_pred hhhhhhhhHHhhhHHHHHHcC--CCchhhhhhHHHHHHHH----HHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH
Q 041627 5 QQFTGINTVMYYSPTIVQMAG--FQSNQLALLPSLVVAGT----NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS 78 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~----~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 78 (204)
.++...+.+....+.+.++.. .++++.+...+...... ..+++++.|+++||+|||+++..+..+..++.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 455666777777787777754 33444444444332221 346889999999999999999999888888777766
Q ss_pred HHH--H--------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH-------
Q 041627 79 WAF--I--------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA------- 141 (204)
Q Consensus 79 ~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------- 141 (204)
... . .+...+++.+.+.+...+....++.|.+|+++|++..+.......+|..+++.+...+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 84 LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 543 1 35566777777777778888899999999999999999999988889888888766543
Q ss_pred -HhhCcchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 142 -DLVGTGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 142 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
+..+|+..+.+...+.++.. ......||+
T Consensus 164 ~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~ 193 (394)
T TIGR00883 164 LLEWGWRIPFLVSAVLVLIGL-YLRRNLEET 193 (394)
T ss_pred hhccchHHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 34678888876655544432 333345554
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.64 E-value=1e-14 Score=113.79 Aligned_cols=166 Identities=19% Similarity=0.301 Sum_probs=125.7
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-----cchH-hHHHhhHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-----GRKK-LALSSLAGVIISLVL 76 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~-~~~~~~~~~~~~~~~ 76 (204)
++.|...+.....-+|.++++.|++.++.+.+...... .+..+++|+++||+ |||| .+..+..+.+++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~---~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA---YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH---HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 35566677788888999999999999998887444432 58899999999999 7876 566666767666665
Q ss_pred HHHHH-----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hCcchhh
Q 041627 77 LSWAF-----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL-VGTGSTF 150 (204)
Q Consensus 77 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~ 150 (204)
+.+.. +.+....++.+.+.....+...+++.|+.|+++|+++.++......+|..+++.+...+.+. .||+..|
T Consensus 85 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f 164 (402)
T PRK11902 85 MAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTY 164 (402)
T ss_pred HHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHH
Confidence 55442 33344444455556666677889999999999999999999999899999999998888875 5899999
Q ss_pred hHHHHHHHHHHHHHHhhccCCC
Q 041627 151 LILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 151 ~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
++.+...++..+ ..++.||++
T Consensus 165 ~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 165 LLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHH-HHHhcCCCc
Confidence 887777665543 345567653
No 89
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.64 E-value=6.9e-15 Score=115.29 Aligned_cols=166 Identities=13% Similarity=0.038 Sum_probs=107.5
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH--
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-- 79 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-- 79 (204)
.++.+.+.+...++.|.++++ +|+++.+.+...+..... ..+++++.|+++||+|||+.+.++..+..+.......
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~-~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLF-ALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 455666667788888888877 899999999988888877 8999999999999999999987765554433322111
Q ss_pred -HH---HHHHHHHHHHHHhcccccccchhhcccccC--CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHH
Q 041627 80 -AF---ISVIGLALYITFFAPGMGPVPWTVNSEVYR--EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLIL 153 (204)
Q Consensus 80 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 153 (204)
.. ..........+...+...........++.+ .++|++.+|.......+|..+++.+.+.+.+ .+|+..|+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~ 176 (420)
T PRK09528 98 FAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLG 176 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHH
Confidence 11 011111111122222222111122222222 3456778888888889999999999988765 4888888877
Q ss_pred HHHHHHHHHHHHhhccC
Q 041627 154 AGIAVLAVVFVILFVPE 170 (204)
Q Consensus 154 ~~~~~i~~~~~~~~~~e 170 (204)
+...++..+..++..+|
T Consensus 177 ~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 177 SGSALILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHHHHHHhccccc
Confidence 76666655444444444
No 90
>PRK15075 citrate-proton symporter; Provisional
Probab=99.64 E-value=1.9e-14 Score=113.25 Aligned_cols=141 Identities=15% Similarity=0.160 Sum_probs=95.6
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH-HHHH-H-
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL-LSWA-F- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~-~~~~-~- 81 (204)
+..+++....|.|.+.++ .|++..+.+......... ..++.++.|+++||+|||+.+..+.....+.... .... .
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVS-NFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 455667888999999887 799888755544444444 7899999999999999999877654443322211 1111 1
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHH-HHHHHHHHHHHHHHhhCcc
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWI-SNLIVAQNFLTVADLVGTG 147 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 147 (204)
........+.+.+.+...+..+.+..|.+|++.|+++.++.+..+.. ++.++|.+.+.+.+..|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 11112122223333344455567889999999999999997665554 5788999999999988864
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=1.8e-15 Score=112.86 Aligned_cols=111 Identities=21% Similarity=0.174 Sum_probs=90.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-H-HHHHHHHHHHHhcccccccchhhcc
Q 041627 30 QLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-I-SVIGLALYITFFAPGMGPVPWTVNS 107 (204)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (204)
..+.+-+.+... +++.++.+|.++||+|||++++++++...+...+.+.+. . .+++.|++.|.+. +..++..++++
T Consensus 69 yaGflGSsF~il-Q~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~v~rAiis 146 (451)
T KOG2615|consen 69 YAGFLGSSFSIL-QFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLSVIRAIIS 146 (451)
T ss_pred hhhhHhhHHHHH-HHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchHHHHHHHH
Confidence 334455555555 999999999999999999999999998888777776665 3 3333366655554 45566779999
Q ss_pred cccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 108 EVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 108 e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
|+.++++|+.+++.......+|.++||.+++++..
T Consensus 147 dV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 147 DVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 99999999999999999999999999999999877
No 92
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.63 E-value=6.7e-15 Score=115.85 Aligned_cols=164 Identities=14% Similarity=0.200 Sum_probs=108.4
Q ss_pred hhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc--cchHhH-HHhhHHHHHHHHH---HHH
Q 041627 7 FTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF--GRKKLA-LSSLAGVIISLVL---LSW 79 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~~-~~~~~~~~~~~~~---~~~ 79 (204)
....+.+..|.|.+++ +.|++..+.+...+....+ ..++.++.|+++||+ ++|+.. ........+.... ...
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~-~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELG-GFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF 334 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH-HHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc
Confidence 3444567778999985 5799988877766666666 899999999999998 333322 2211111111111 111
Q ss_pred HH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHH
Q 041627 80 AF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAV 158 (204)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (204)
.. .......+..+.+..+..........|.+|+++|+++.|+.+....+|+.++|.+.+.+.+..||+..|...+++.+
T Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~ 414 (434)
T PRK11663 335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAG 414 (434)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHH
Confidence 11 11112222223222222223345678999999999999999999999999999999999999999988888888777
Q ss_pred HHHHHHHhhccCC
Q 041627 159 LAVVFVILFVPET 171 (204)
Q Consensus 159 i~~~~~~~~~~e~ 171 (204)
+..+..++..+++
T Consensus 415 ~~~~~~~~~~~~~ 427 (434)
T PRK11663 415 ISALLLLPFLNAQ 427 (434)
T ss_pred HHHHHHHHHHhhh
Confidence 7766555544444
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.63 E-value=2.3e-14 Score=115.13 Aligned_cols=159 Identities=12% Similarity=0.117 Sum_probs=121.4
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-------H
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-------F 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-------~ 81 (204)
..|.+..+.|.+.+++|++..+.+++.+... . .....++.|++.||+|||+++.++.++..++.+..... .
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTVGI-A-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 3478888999999999999999888776533 3 34567788999999999999999999999998887775 1
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
+.+.+.+.+.+.+.+...+.....+.+++| ++||++.|+......+|+.+.+.+...+.. .+|+..+++.+.+..+.
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 455566667777666666667778889997 789999999999999999865555554443 35667777777777776
Q ss_pred HHHHHhhccCC
Q 041627 161 VVFVILFVPET 171 (204)
Q Consensus 161 ~~~~~~~~~e~ 171 (204)
.++...++++.
T Consensus 198 ~ll~~~~vr~p 208 (591)
T PTZ00207 198 GILAIVFMRLP 208 (591)
T ss_pred HHHHHhheeCC
Confidence 66655555443
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.63 E-value=8.7e-15 Score=109.10 Aligned_cols=136 Identities=21% Similarity=0.236 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccccchhhcccccCCcch
Q 041627 38 VVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYR 115 (204)
Q Consensus 38 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 115 (204)
......++|.++.+++.||+|||+.+....++++++.+...... ....+..+....+..+.+.+.++|..|++|+..|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 33444899999999999999999999999999998888776654 3444445555666777788899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCCcC
Q 041627 116 GICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQGLT 175 (204)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~ 175 (204)
+++.|.....+++|+++.|.+. +........+..+++.+++++.+...++--||+++.
T Consensus 469 atgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 9999999999999999999988 444455556777888888888777666666888764
No 95
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.63 E-value=5.2e-15 Score=117.10 Aligned_cols=154 Identities=14% Similarity=0.042 Sum_probs=111.1
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc--cchHhHHHhh--HHHHHHHHHHHHHH--
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF--GRKKLALSSL--AGVIISLVLLSWAF-- 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~~~~~~--~~~~~~~~~~~~~~-- 81 (204)
.+.+....++|.+.++.|++..+.+...+....+ ..++.++.|+++||. ++|+...... ....++.+......
T Consensus 255 ~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~ 333 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFV-DIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY 333 (455)
T ss_pred HHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 3445566788889889999998878877776666 788999999999973 3443333322 22222222222222
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAVLA 160 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 160 (204)
+.+....++.+...+...+....++.|.+|+++|+++.|+.+....+++.++|.+.+.+.+..+ |+..|++.+++.+++
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHH
Confidence 3444556666666666667778889999999999999999999999999999999999888774 888888777666555
Q ss_pred HH
Q 041627 161 VV 162 (204)
Q Consensus 161 ~~ 162 (204)
.+
T Consensus 414 ~~ 415 (455)
T TIGR00892 414 GL 415 (455)
T ss_pred HH
Confidence 43
No 96
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.62 E-value=3e-14 Score=112.75 Aligned_cols=165 Identities=16% Similarity=0.202 Sum_probs=105.6
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc--cchHhHH-HhhHHHHHHHHHHHHHH
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF--GRKKLAL-SSLAGVIISLVLLSWAF 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~~~-~~~~~~~~~~~~~~~~~ 81 (204)
.....+....|.|.++++ .|++..+.+......... ..++.++.|+++||+ |||+... ....+..+.........
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~-~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~ 343 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP 343 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 344456778899999987 688887766666555555 788999999999999 5554322 22222222222221111
Q ss_pred ----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHH-HHHHHHHHHHhhCcchhhhHHHHH
Q 041627 82 ----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLI-VAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
..........+....+.......+..|.+|++.||++.|+.+....+++.+ +|.+.+.+.+..||+..|++..+.
T Consensus 344 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~ 423 (452)
T PRK11273 344 AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 423 (452)
T ss_pred ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHH
Confidence 111122222222222222223356779999999999999999988888765 789999999999999898887777
Q ss_pred HHHHHHHHHh-hccCC
Q 041627 157 AVLAVVFVIL-FVPET 171 (204)
Q Consensus 157 ~~i~~~~~~~-~~~e~ 171 (204)
++++.+.... ..+|+
T Consensus 424 ~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 424 SILAVILLIVVMIGEK 439 (452)
T ss_pred HHHHHHHHHHHhcccc
Confidence 7766554443 33444
No 97
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.62 E-value=2.4e-14 Score=110.97 Aligned_cols=151 Identities=15% Similarity=0.104 Sum_probs=111.7
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHH-HHHHHH-HHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAG-VIISLV-LLSWA 80 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~-~~~~~~-~~~~~ 80 (204)
++..+.++....+++|.+.+++|.+..+.+...+..... ..+++++.|.++||+|||......... ..+... .....
T Consensus 13 ~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~ 91 (382)
T TIGR00902 13 FFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIA-RFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGA 91 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666677788999999999999999999988888887 899999999999999985433222111 111111 11122
Q ss_pred H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 81 F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
. +.+...+.+.+.+.....+....+..|. +++|++++|.....+.+|..++|.+.+.+.+.+||+..|......
T Consensus 92 ~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 92 HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 2 4455556656666666667776776553 577899999999999999999999999999999999988776544
No 98
>PRK10133 L-fucose transporter; Provisional
Probab=99.62 E-value=2.3e-14 Score=112.83 Aligned_cols=136 Identities=13% Similarity=-0.022 Sum_probs=110.6
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH---HH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS---WA 80 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~ 80 (204)
+.............|.+.+++|.++.+.++..+....+ ..+++++.|+++||+|||+++..+..+..++.+++. ..
T Consensus 36 ~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g-~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a 114 (438)
T PRK10133 36 FLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFG-YFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI 114 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33344456677888999889999999988888888777 899999999999999999999999999888887653 22
Q ss_pred H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 81 F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
+ ..+...+++.+.+.+...+....++.|..|+++|....+..+....+|..+++.+.+.+
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 55667778888888888888888888887777777778899999889999988887654
No 99
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.61 E-value=1.9e-18 Score=136.37 Aligned_cols=177 Identities=37% Similarity=0.705 Sum_probs=134.0
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH--HH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS--WA 80 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~--~~ 80 (204)
.+++..+++....|.|.+.++.+.++. ...+........++.++..++.||+|||+.++.+...+.++...+. ..
T Consensus 262 ~~~~~~g~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~ 338 (451)
T PF00083_consen 262 FFQQFSGINFIFYYSPSIFENAGISNS---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFF 338 (451)
T ss_pred ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345567777888899999988888777 2233333344677888888999999999999888887777766654 11
Q ss_pred H---H-------HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 041627 81 F---I-------SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTF 150 (204)
Q Consensus 81 ~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 150 (204)
. . ...........+..+..+..+.+.+|.+|++.|+++.++....+++++.+++.+.+.+.+..+....+
T Consensus 339 ~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 418 (451)
T PF00083_consen 339 LGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVF 418 (451)
T ss_pred cccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1 1 11122222234444667888899999999999999999999999999999999988887777744677
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCcCHHHHHHH
Q 041627 151 LILAGIAVLAVVFVILFVPETQGLTFLEVEQR 182 (204)
Q Consensus 151 ~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~ 182 (204)
.+.++++.+..++.++++|||++++.+|.++.
T Consensus 419 ~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 419 LIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred hhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 77788888887888889999999999988764
No 100
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.61 E-value=2.7e-14 Score=112.09 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=100.5
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---HHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 87 (204)
+.+..+.|.+.++.|.++.+.+...+....+ ..++.++.|++.||+|||+.+..+..+..+......... ......
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (426)
T PRK12307 248 WPIFGLLPTYLAGEGFDTGVVSNLMTAAAFG-TVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGA 326 (426)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHH
Confidence 3466788999999999888877766666555 899999999999999999988877766555444333222 111111
Q ss_pred -HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcch
Q 041627 88 -ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGS 148 (204)
Q Consensus 88 -~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 148 (204)
.+..+....+..+..+.++.|.+|+++|+++.|+......+++.++|.+.+.+.+..++..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~ 388 (426)
T PRK12307 327 CLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGA 388 (426)
T ss_pred HHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHH
Confidence 1111222233445566788999999999999999999999999999999999988887543
No 101
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.61 E-value=8.5e-16 Score=117.15 Aligned_cols=178 Identities=22% Similarity=0.358 Sum_probs=137.3
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhh--------hHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLAL--------LPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV 75 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 75 (204)
|..-.+.|....+...++++.|+.+..... ...+......++|..+...++|++|||+..+.+..++.+..+
T Consensus 314 FllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~ 393 (538)
T KOG0252|consen 314 FLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFF 393 (538)
T ss_pred HhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHH
Confidence 334456788888999999988876654332 122223332455777888999999999999999999888877
Q ss_pred HHHHHH-------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-----h
Q 041627 76 LLSWAF-------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD-----L 143 (204)
Q Consensus 76 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~ 143 (204)
.+.... ...+...+...+...+.......+.+|.+|++.|+++.|+....+..|++++...+..+.+ .
T Consensus 394 ~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 394 VIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred HHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcc
Confidence 765432 2234444555667778888889999999999999999999999999999999999999888 6
Q ss_pred hCcchhhhHHHHHHHHHHHHHHhhccCCCCcCHHHHHHH
Q 041627 144 VGTGSTFLILAGIAVLAVVFVILFVPETQGLTFLEVEQR 182 (204)
Q Consensus 144 ~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~ 182 (204)
.+.+..+++.+.++.+.. +..+++|||++++.|+.+++
T Consensus 474 ~g~~~v~~i~~~~~~~gi-~~T~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 474 IGVRNVFIILAGCMLLGI-LFTLLIPETKGKSLEEISNE 511 (538)
T ss_pred ccchHHHHHHHHHHHHhH-heeEEeecccccCHHHhcCh
Confidence 788889999888887775 44566799999998887544
No 102
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.61 E-value=3.1e-14 Score=108.30 Aligned_cols=159 Identities=28% Similarity=0.347 Sum_probs=132.5
Q ss_pred hhhhhhhhhHHhhhHHHHHHc-CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchH-hHHHhhHHHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMA-GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~ 81 (204)
+......+....+.|.+.++. |.++.+.+......... ..++.++.+++.||+|||+ .+..+..+..++........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLG-GILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 445566778888999998875 88888877777666666 8999999999999999999 88888888777777666544
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
........+.+.+.+...+....+..|..|+++|++..++.+...+++..+++.+.+.+.+..+|+..+.+.+++.++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 455556677777778888889999999999999999999999999999999999999999888999888888877776
Q ss_pred HHHH
Q 041627 160 AVVF 163 (204)
Q Consensus 160 ~~~~ 163 (204)
..+.
T Consensus 344 ~~i~ 347 (352)
T cd06174 344 AALL 347 (352)
T ss_pred HHHH
Confidence 6544
No 103
>PRK09952 shikimate transporter; Provisional
Probab=99.61 E-value=7.3e-14 Score=110.13 Aligned_cols=165 Identities=12% Similarity=0.085 Sum_probs=108.3
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA--F 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~ 81 (204)
+...+.|....|.|.+.++ +|.++............. ..++.++.|+++||+|||+.+..+.++..++....... .
T Consensus 261 ~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~-~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
T PRK09952 261 CELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGL-SCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445667778889988754 788776533333333333 67888999999999999998887766554443322221 1
Q ss_pred ---HHH-HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHH-HHHHHHHHHHHHHHHhh--CcchhhhHHH
Q 041627 82 ---ISV-IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNW-ISNLIVAQNFLTVADLV--GTGSTFLILA 154 (204)
Q Consensus 82 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~--~~~~~~~~~~ 154 (204)
... ....++.+...+...+..+.+.+|.+|++.|+++.++.+..+. +++.++|.+.+.+.+.. +|...+....
T Consensus 340 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~ 419 (438)
T PRK09952 340 QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLL 419 (438)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 112 2222333344444456677899999999999999999776654 78899999999988755 3666666555
Q ss_pred HHHHHHHHHHHhhccCC
Q 041627 155 GIAVLAVVFVILFVPET 171 (204)
Q Consensus 155 ~~~~i~~~~~~~~~~e~ 171 (204)
+..+++.+.. +.++|+
T Consensus 420 ~~~~i~~v~~-~~~~~~ 435 (438)
T PRK09952 420 AGCLISAMTA-LLMKDN 435 (438)
T ss_pred HHHHHHHHHH-HHcccc
Confidence 5555554443 445664
No 104
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.61 E-value=3.5e-14 Score=110.52 Aligned_cols=160 Identities=23% Similarity=0.120 Sum_probs=114.8
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.++.....+.|.+.++.|.+. .+...+....+ ..++.++.|++.||+|||+.+..+..+..++........ ....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK05122 230 IGFGTIATFITLYYAARGWDG--AALALTLFGVA-FVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMAL 306 (399)
T ss_pred HHHHHHHHHHHHHHHHccccc--chHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 344556678888887777643 24444444444 688999999999999999988877776666655544433 3333
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
....+.+.+.+...+.......|..|+++|+++.++.+....++..+++.+.+.+.+..||+..++..+.+.+++.+...
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555566778899999999999999999999999999999999999998888887777766655444
Q ss_pred hhccCC
Q 041627 166 LFVPET 171 (204)
Q Consensus 166 ~~~~e~ 171 (204)
+ .+++
T Consensus 387 ~-~~~~ 391 (399)
T PRK05122 387 L-LYRR 391 (399)
T ss_pred H-hccc
Confidence 3 3443
No 105
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.61 E-value=2.1e-14 Score=111.79 Aligned_cols=165 Identities=14% Similarity=0.136 Sum_probs=113.1
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH--
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-- 79 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-- 79 (204)
.++.+.+...+.+++|.+.++ +|.++.+.+...+..... ..+++++.|+++||+|||+.++.+.....+.......
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~-~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 89 (396)
T TIGR00882 11 FFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLF-SILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYV 89 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777888899888765 899999989888888777 8999999999999999999988766555443332211
Q ss_pred -HH-------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhh
Q 041627 80 -AF-------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFL 151 (204)
Q Consensus 80 -~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 151 (204)
.. ....+.++..+.......+....+..|..+ +++...|.....+++|..+++.+.+.+. ..+|+..|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~-~~~~~~~f~ 166 (396)
T TIGR00882 90 FGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILF-SIDPQIVFW 166 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhh-ccCchHHHH
Confidence 11 112222344444445555555555555433 3445677788888899999999988765 458999998
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 041627 152 ILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~e~ 171 (204)
+.+.+.++..+..+...||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 167 LGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 87777766655444444443
No 106
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.60 E-value=3.6e-14 Score=109.98 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=115.6
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchH----hHHHhhHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKK----LALSSLAGVIISLVLLS 78 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~----~~~~~~~~~~~~~~~~~ 78 (204)
++..+.+...+.+++|.+.++.|.+..+.+...+..... ..+++++.|+++||+|||. .+.+..... .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~-~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVA-RFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHH-HHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHHH
Confidence 345556677788899999999999999999998888777 8999999999999999943 222221111 11111
Q ss_pred HH-H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHH
Q 041627 79 WA-F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAG 155 (204)
Q Consensus 79 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (204)
.. . +.+...+.+.+.+.+...+...++..++ .++|+++.+.....+.+|..++|.+.+.+.+.+||+..|+..+.
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 11 1 4455566666766666677666666665 45678889999999999999999999999999999998887665
Q ss_pred HHHHHHHHHHhhccCC
Q 041627 156 IAVLAVVFVILFVPET 171 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~ 171 (204)
...+.. +..+..||.
T Consensus 167 ~~~~~~-~~~~~~~~~ 181 (382)
T PRK11128 167 GVASML-LGQLLRPTI 181 (382)
T ss_pred HHHHHH-HHHHccCCC
Confidence 444333 333344554
No 107
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.60 E-value=8.6e-15 Score=119.74 Aligned_cols=160 Identities=16% Similarity=0.079 Sum_probs=128.9
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--------
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-------- 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-------- 81 (204)
.......+|++.++++++..+.+++.+....+ ..++.++.+++.||.|||+.+.++.+++.++.++.+...
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~-~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIG-NLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHH-HHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 34555666788888999999989988888887 899999999999999999999999999988888765431
Q ss_pred ---------------------------------------------HHHHHHHHHHHHhcccccccchhhcccccCCcchh
Q 041627 82 ---------------------------------------------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRG 116 (204)
Q Consensus 82 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 116 (204)
..+++.+++.|.+.+...+....++.|++|+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 23456788888888888899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhh----------------------CcchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 117 ICGGMSATVNWISNLIVAQNFLTVADLV----------------------GTGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
+..++......+|..+++.+.+.+.+.+ +|+..|++.+++.++..+. +++.|++
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~ 283 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKA 283 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCccc
Confidence 9999999999999999999998877543 1555677766666655443 3455654
No 108
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=9.6e-14 Score=107.98 Aligned_cols=159 Identities=9% Similarity=0.107 Sum_probs=108.3
Q ss_pred hhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 9 GINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 9 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
..+.+..+.|.+.+ ++|.++.+.+...+..... ..++.++.|+++||+|||+.+..+.....+......... ....
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~-~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGL-EIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILL 309 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 33445567888775 4788888877766655444 688999999999999999987766554444333222222 2223
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
....+.+...+...+....+..|.+|+ +|+++.++.+...++|+.+++.+.+.+.+..+|+..+++...+.++..+. .
T Consensus 310 ~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~-~ 387 (393)
T PRK15011 310 GLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC-L 387 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-H
Confidence 333333333333334455677898885 58999999999899999999999999999889988887766666555443 4
Q ss_pred hhccC
Q 041627 166 LFVPE 170 (204)
Q Consensus 166 ~~~~e 170 (204)
++.||
T Consensus 388 ~~~~~ 392 (393)
T PRK15011 388 LRIKD 392 (393)
T ss_pred HhhcC
Confidence 44554
No 109
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.58 E-value=7e-14 Score=111.62 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=123.2
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-----cchHh-HHHhhHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-----GRKKL-ALSSLAGVIISLVLL 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~-~~~~~~~~~~~~~~~ 77 (204)
+.+..........+|.+.++.|.+.++.+.. +..... .++.+++|+++||+ |||+. +..+.+...++...+
T Consensus 22 ~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~ 98 (491)
T PRK11010 22 FASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAM 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 3455566677778899999999998887765 333232 36899999999999 99986 445555555555555
Q ss_pred HHHH-----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhh
Q 041627 78 SWAF-----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD-LVGTGSTFL 151 (204)
Q Consensus 78 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~ 151 (204)
.+.. ..+...+.+.+.+.....+...++..|++|+++|+++.++......+|..+++.+...+.+ ..||+..|+
T Consensus 99 a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~ 178 (491)
T PRK11010 99 GFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYW 178 (491)
T ss_pred HHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHH
Confidence 4431 3445456666666666667788999999999999999999999999999999999988888 469999999
Q ss_pred HHHHHHHHHHHHHHhhccCCC
Q 041627 152 ILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~e~~ 172 (204)
+.+...++..+.. ++.||++
T Consensus 179 i~a~l~ll~~l~~-~~~~e~~ 198 (491)
T PRK11010 179 LMAALLIPCIIAT-LLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHH-HhcCCCc
Confidence 8887766664433 3467764
No 110
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=6.6e-14 Score=109.77 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=111.5
Q ss_pred HhhhHHHHHHc----CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 14 MYYSPTIVQMA----GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 14 ~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
..+.|.+..+. +.+..+.+...+..... ..++.++.|++.||+|||+.+..+..+..+......+.. +.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 321 (420)
T PRK09528 243 DQQFPNFFASFFATPEQGTRVFGYLNSFQVFL-EALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSIL 321 (420)
T ss_pred HHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 33456555442 44555556666666655 789999999999999999998887777776666555443 333444
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhH-HHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGM-SATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVIL 166 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 166 (204)
..+.+.......+....++.|.+|++.|++..+. .+....+|+.+++.+.+.+.+..||+..|...+.+.++..++..+
T Consensus 322 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 322 KLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 4444444433344455788899999999988766 566778999999999999999999999998888777766655555
Q ss_pred hccCC
Q 041627 167 FVPET 171 (204)
Q Consensus 167 ~~~e~ 171 (204)
..++.
T Consensus 402 ~~~~~ 406 (420)
T PRK09528 402 TLSGD 406 (420)
T ss_pred HhcCC
Confidence 55543
No 111
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=7.2e-14 Score=112.19 Aligned_cols=139 Identities=22% Similarity=0.182 Sum_probs=115.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccccchhhcccc
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEV 109 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 109 (204)
+++.+....+ ..+++++.|+++|++|||+.++.+.+...++.++...+. ..+...|++.+.+.++...+.+.|.+|+
T Consensus 92 s~~~s~~~lg-a~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi 170 (513)
T KOG0254|consen 92 GLLTSILNLG-ALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEI 170 (513)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence 6777777777 899999999999999999999999999999999988876 7788889999999999999999999999
Q ss_pred cCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh--hCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 110 YREQYRGICGGMSATVNWISNLIVAQNFLTVADL--VGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 110 ~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
.|++.||...+.......+|..++ .+.+...+. .+||..+.+..+.+++..+. .++.||+++
T Consensus 171 ap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 171 APAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 999999999998888888666665 555555544 37987777767666666555 778898854
No 112
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.57 E-value=2.3e-13 Score=107.14 Aligned_cols=155 Identities=16% Similarity=0.080 Sum_probs=96.3
Q ss_pred hhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH-HH---
Q 041627 7 FTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-AF--- 81 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~--- 81 (204)
...++.+..|+|.++++ +|.+..+.+...+..... ..++.++.|+++||+|||+.+.....+..+....... ..
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~-~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFV-FMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVS 334 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45567788999998865 788887766666666666 6788889999999999999877655543333222111 11
Q ss_pred -HHH-HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHH-HHHHHHHHHHHHHHhhC-cchhhhHHHHHH
Q 041627 82 -ISV-IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWI-SNLIVAQNFLTVADLVG-TGSTFLILAGIA 157 (204)
Q Consensus 82 -~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 157 (204)
... .....+.....+...+..+.+.+|.+|++.|+++.|+.+..++. .+...|.+.+. .+..| |...++..+...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~ 413 (432)
T PRK10406 335 SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMA 413 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHH
Confidence 111 11111111222222345667889999999999999999987765 24446666664 45556 433444444444
Q ss_pred HHHHHH
Q 041627 158 VLAVVF 163 (204)
Q Consensus 158 ~i~~~~ 163 (204)
++..+.
T Consensus 414 ~i~~~~ 419 (432)
T PRK10406 414 VVAFLV 419 (432)
T ss_pred HHHHHH
Confidence 444333
No 113
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.57 E-value=2e-13 Score=106.52 Aligned_cols=159 Identities=15% Similarity=0.159 Sum_probs=111.0
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHH-HhhHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWA-- 80 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~~-- 80 (204)
+++..+.++...|.|.+.++.|++..+.+......... ..++.+..|+++||+|||+.+. .+.....+........
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~-~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFT-NIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678888999999999999988866666666555 8999999999999999988753 2222222222222111
Q ss_pred -----HHHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHH
Q 041627 81 -----FISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAG 155 (204)
Q Consensus 81 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (204)
........+..+.+.....+. .....|..| ++|+++.|+.+....+++.++|.+.+.+.+..|+...+++.++
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~ 388 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAA 388 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 122233344444444443333 345567654 6899999999999999999999999999999998888888777
Q ss_pred HHHHHHHHHH
Q 041627 156 IAVLAVVFVI 165 (204)
Q Consensus 156 ~~~i~~~~~~ 165 (204)
+.++..+...
T Consensus 389 ~~~i~~~~~~ 398 (402)
T TIGR00897 389 LYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHH
Confidence 7666654433
No 114
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.57 E-value=2.4e-13 Score=105.28 Aligned_cols=151 Identities=12% Similarity=0.107 Sum_probs=112.0
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISVIGLAL 89 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (204)
......++|.+.++.|.++.+.+.+.+..... ..++.++.|++.||+|||+.+..+.....++...... .........
T Consensus 216 ~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 293 (381)
T PRK03633 216 LGSLYGLMPLYLNHQGMSDASIGFWMALLVSA-GILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS-QAAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence 34456678999998999988877777766655 7999999999999999999887776666555443321 111222233
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHH
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (204)
+.+.......+.......|..|+++++...+..+...++|+.++|.+.+.+.+..++++.|.+.+.+.++..+
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 3344444456777788889999888887888888888899999999999999999998888877776665543
No 115
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.57 E-value=8.5e-14 Score=108.94 Aligned_cols=140 Identities=19% Similarity=0.120 Sum_probs=104.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcccccccchhhc
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----ISVIGLALYITFFAPGMGPVPWTVN 106 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (204)
+...++...+ +++|+++.++++||+|||..+.+..++..++...+..+. ..+...+++.|...+......+.|+
T Consensus 63 S~~vs~f~iG-~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 63 SLIVSIFFIG-GMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3445566666 899999999999999999999998888888777766654 5677788888888888888999999
Q ss_pred ccccCCcchhhhhhHHHHHHHHHHHHHHHHH-HHHHHh-hCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 107 SEVYREQYRGICGGMSATVNWISNLIVAQNF-LTVADL-VGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 107 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
.|+.|.+.||....+......+|..++..+. +.+... ..|.+.+....++.++ ..+...++||+++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~-~l~~l~~~PESPk 209 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL-QLALLPFLPESPK 209 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH-HHHHHhcCCCCcc
Confidence 9999999999888888887777777775554 223322 2365555444444433 3556678899865
No 116
>PRK12382 putative transporter; Provisional
Probab=99.57 E-value=1.6e-13 Score=106.56 Aligned_cols=157 Identities=20% Similarity=0.105 Sum_probs=115.9
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
.+......+.|.+.++.|.++. +......... ..++.++.|++.||+|||+.+..+..+..++........ ....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWAMA--GFTLTAFGGA-FVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVAL 306 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCchh--HHHHHHHHHH-HHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHH
Confidence 4455667788888888776543 3333433333 688999999999999999998887777666655544433 2333
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
....+.+.+.+...+.......|.+|+++|+++.|+.+....+++.++|.+.+.+.+..||+..+.+.+.+.++..+...
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 33444455555555666677889999999999999999999999999999999999999999999888877776665544
Q ss_pred hh
Q 041627 166 LF 167 (204)
Q Consensus 166 ~~ 167 (204)
+.
T Consensus 387 ~~ 388 (392)
T PRK12382 387 LS 388 (392)
T ss_pred hh
Confidence 43
No 117
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.56 E-value=2.8e-13 Score=118.18 Aligned_cols=126 Identities=10% Similarity=0.069 Sum_probs=96.8
Q ss_pred hHHHHHHcCCCchh--hhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH---H--HHHHHHHH
Q 041627 17 SPTIVQMAGFQSNQ--LALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA---F--ISVIGLAL 89 (204)
Q Consensus 17 ~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~ 89 (204)
.+.+..+++.+... .++..++.... ..++++++|+++||+|||++++.+..+.++..+..... . +.+++.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 111 (1146)
T PRK08633 33 QNTLIKAYDGSEQVILTAIVNALFLLP-FLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTF 111 (1146)
T ss_pred HHHHHHHcCcccHHHHHHHHHHHHHHH-HHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34444455554332 34555555555 78999999999999999999988776655544443322 1 56667778
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
+.+.+.+...+...+++.|++|+++|++++|+......+|..+++.+.+.+...
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888899999999999999999999999999999999999988776
No 118
>PRK03699 putative transporter; Provisional
Probab=99.56 E-value=9.9e-14 Score=107.94 Aligned_cols=158 Identities=13% Similarity=0.111 Sum_probs=115.9
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+...+.+.+..|.|.+.++ +|++..+.+...+....+ ..++.++.|+++||++||+.+.....+..+.........
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~-~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~ 294 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMA-YMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDP 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHH-HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCc
Confidence 3444566788899999964 799988878777777666 799999999999999999988776665555444433322
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAV 161 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (204)
.......+..+.+.+...+....+..|..| +++++..+.......+|+.++|.+.+.+.+..|++..++...++..++.
T Consensus 295 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (394)
T PRK03699 295 SHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF 373 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH
Confidence 233333444555555555666666777665 4467788888888899999999999999999999888888777766665
Q ss_pred HHH
Q 041627 162 VFV 164 (204)
Q Consensus 162 ~~~ 164 (204)
+.+
T Consensus 374 ~~~ 376 (394)
T PRK03699 374 VMC 376 (394)
T ss_pred HHH
Confidence 443
No 119
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=3.1e-14 Score=107.83 Aligned_cols=163 Identities=19% Similarity=0.201 Sum_probs=123.9
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc--cchHhHHHhhHH-HHHHHHHHHHH
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF--GRKKLALSSLAG-VIISLVLLSWA 80 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~~~~~~~~-~~~~~~~~~~~ 80 (204)
..+..=+++..|.|.|+.+ .|++..+.++..+.+-.+ +++|++++|+++||+ |||....+.+.+ ..++.......
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~a-gl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~ 341 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVA-GLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA 341 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHH-hhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC
Confidence 3444557889999999876 799999989999999999 899999999999996 777765544333 33333333333
Q ss_pred H----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHH-HHHHHHHHHHHHHHhhCcchhhhHHHH
Q 041627 81 F----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWI-SNLIVAQNFLTVADLVGTGSTFLILAG 155 (204)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (204)
+ .......+..|+...+..-..-....|..|++.-|++.|+...++.+ |...+....+++.+.+||...|.+..+
T Consensus 342 ~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~ 421 (448)
T COG2271 342 PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSI 421 (448)
T ss_pred CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHH
Confidence 3 33444455556666666666667889999999999999999999999 888888888888888999999988887
Q ss_pred HHHHHHHHHHhhc
Q 041627 156 IAVLAVVFVILFV 168 (204)
Q Consensus 156 ~~~i~~~~~~~~~ 168 (204)
..+++.+......
T Consensus 422 ~a~l~~lll~~~~ 434 (448)
T COG2271 422 AALLAILLLLPVW 434 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 7777766554443
No 120
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.55 E-value=1.1e-13 Score=109.20 Aligned_cols=167 Identities=14% Similarity=0.165 Sum_probs=109.5
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHH---HHHHHHHH
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVII---SLVLLSWA 80 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~---~~~~~~~~ 80 (204)
+.....+++..|.|.+.++ .|.++.+.++........ +.++.++.|+++||+++++....+.....+ +.......
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~-~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMN 340 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHH-HHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhc
Confidence 3445557788899999987 688888767666666555 899999999999999654322222222111 11111111
Q ss_pred H----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHH-HHHHHHHHHHHHhhCcchhhhHHHH
Q 041627 81 F----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISN-LIVAQNFLTVADLVGTGSTFLILAG 155 (204)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (204)
. .......+..+....+..........|.+|+++|+++.|+.+....+++ .++|.+.+.+.+..||...+++..+
T Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~ 420 (438)
T TIGR00712 341 PAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 420 (438)
T ss_pred CCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHH
Confidence 0 1111112222222222112223457799999999999999998888875 6799999999999999888888887
Q ss_pred HHHHHHHHHHhhccCCC
Q 041627 156 IAVLAVVFVILFVPETQ 172 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~~ 172 (204)
+.+++.+...+..||.|
T Consensus 421 ~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 421 GSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 77777777777777754
No 121
>TIGR00898 2A0119 cation transport protein.
Probab=99.54 E-value=8.3e-14 Score=111.64 Aligned_cols=134 Identities=22% Similarity=0.302 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHHHHHHHHHhcccccccchhhcccccCCcch
Q 041627 40 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYR 115 (204)
Q Consensus 40 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 115 (204)
....+++.++.+++.||+|||+.+..+.++.+++.+...... ........+.+.+.....+..+.+.+|.+|++.|
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 444 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVR 444 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHH
Confidence 344788999999999999999999888887777766555443 2223333344444455566778999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCCcCH
Q 041627 116 GICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQGLTF 176 (204)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~ 176 (204)
+++.|+.+....+|++++|.+.+ + ...++..++.+.++..+++.+. .+++||+++++.
T Consensus 445 ~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~~~l 502 (505)
T TIGR00898 445 NLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGIL-TLFLPETKGVPL 502 (505)
T ss_pred hhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHH-HHcCcCCCCCCC
Confidence 99999999999999999999988 3 4445556777777666666444 456799877554
No 122
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=5.6e-13 Score=102.73 Aligned_cols=151 Identities=12% Similarity=0.116 Sum_probs=107.7
Q ss_pred hhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 11 NTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
.....+.|.+. +++|.++.+.+......... ..++.++.|++.||+|||+.+..+.....+......... +.....
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGL-EIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLML 294 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667776 45788888877665554444 678889999999999999988776655444433333222 333333
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHH
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 163 (204)
..+.+.+.+...+....+..|..|+ +|+++.++.+...++|..++|.+.+.+.+..||+..++..+++.+++.+.
T Consensus 295 ~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 295 QLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 4444554444556666788898876 46699999999999999999999999999999988888877776666544
No 123
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.53 E-value=1.9e-14 Score=108.05 Aligned_cols=149 Identities=17% Similarity=0.126 Sum_probs=131.9
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhccccccc
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPV 101 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 101 (204)
.+..+.+.+++....... +.+..++.|.+.||+|+|-.++++...+....+++++.. ...++.|.+.+.+.......
T Consensus 101 ~~~e~~~iG~LFaskA~~-qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALV-QLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred ccccccchhHHHHHHHHH-HHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 455667778888888887 999999999999999999999999999999998888766 67788899999999999999
Q ss_pred chhhcccccCCcc-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 102 PWTVNSEVYREQY-RGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 102 ~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
..+++++.+|+++ |++++|....+..+|-.++|+.++.+.+..|.+.+|.+.++++++...+.++.++.++.
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 9999999999766 79999999999999999999999999999999999999999998887777666655543
No 124
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.53 E-value=2.5e-13 Score=104.91 Aligned_cols=160 Identities=19% Similarity=0.298 Sum_probs=109.7
Q ss_pred hhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHH-hhHHHHHH----HHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALS-SLAGVIIS----LVLL 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~~~~~----~~~~ 77 (204)
+......+....+.|.+.++ .|.++.+.+......... ..++.++.|+++||+|||+.... ......++ ....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 225 FLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIV-GFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 34445566777888888765 788887767766666555 79999999999999999962111 11111111 1111
Q ss_pred -HH--H-HHHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhH
Q 041627 78 -SW--A-FISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLI 152 (204)
Q Consensus 78 -~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 152 (204)
.. . ...........+....+..+....+..|.+|+++|+++.++.+....+++.++|.+.+.+.+..+ |+..+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~ 383 (399)
T TIGR00893 304 FATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383 (399)
T ss_pred HHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHH
Confidence 11 1 12222222333333444677888999999999999999999999999999999999999999888 8878877
Q ss_pred HHHHHHHHHHHH
Q 041627 153 LAGIAVLAVVFV 164 (204)
Q Consensus 153 ~~~~~~i~~~~~ 164 (204)
.+.+.+++.+..
T Consensus 384 ~~~~~~~~~~~~ 395 (399)
T TIGR00893 384 VAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHH
Confidence 776666655443
No 125
>PRK03545 putative arabinose transporter; Provisional
Probab=99.52 E-value=1.1e-12 Score=102.04 Aligned_cols=157 Identities=20% Similarity=0.118 Sum_probs=109.9
Q ss_pred hhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHH-HHHH--HHH
Q 041627 9 GINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL-SWAF--ISV 84 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~-~~~~--~~~ 84 (204)
..+....+.|.+.++ .|.+..+.+......... +.+++++.|+++||+|||+... +..+..++.... .... ...
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~-~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 297 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGA-GIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHL 297 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHH-HHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHH
Confidence 334445666666665 688888877776666655 8999999999999999887543 333333332222 2211 333
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
.....+.+.......+.....+.|..| ++|+++.|+......+|..+++.+.|.+.+..|++..++..+.+.+++.+..
T Consensus 298 ~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 298 SVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 334444455544444555567777766 6889999999999999999999999999999999999988888877776665
Q ss_pred Hhhc
Q 041627 165 ILFV 168 (204)
Q Consensus 165 ~~~~ 168 (204)
....
T Consensus 377 ~~~~ 380 (390)
T PRK03545 377 ILIF 380 (390)
T ss_pred HHHc
Confidence 5544
No 126
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.52 E-value=7.4e-13 Score=104.78 Aligned_cols=168 Identities=21% Similarity=0.263 Sum_probs=131.8
Q ss_pred hhhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccch--HhHHHhhHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRK--KLALSSLAGVIISLVLLSW 79 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~ 79 (204)
.+.-..+++++......|.+ ++|++..+......+.... +++|++++|++.||+|.| +++..+.+...+..+...+
T Consensus 290 ~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~-a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 290 YFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIV-AIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 34455677888888888877 6999999866555555555 899999999999999999 7777776666433333222
Q ss_pred ---------HH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cch
Q 041627 80 ---------AF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGS 148 (204)
Q Consensus 80 ---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 148 (204)
.. +.+.+...+.+.+.++.++..-++.+|+.|+++.+..+|+....+...++++|.+.+.+.+..| .|.
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 11 6777788888999999999999999999999999999999999999999999999999999887 677
Q ss_pred hhhHHHHHHHHHHHHHHhhccCCC
Q 041627 149 TFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 149 ~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.+....++.+++.++. ..+++.+
T Consensus 449 g~~~l~~lf~~gl~ll-~~v~~~~ 471 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILL-FFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHHH-hhccchh
Confidence 7777666666665443 4455443
No 127
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.52 E-value=6.5e-13 Score=115.84 Aligned_cols=136 Identities=12% Similarity=0.034 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHH--HHHHHHHHHHH-H--HHHHHHHHHHHHhcccccccchhhcccc
Q 041627 35 PSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAG--VIISLVLLSWA-F--ISVIGLALYITFFAPGMGPVPWTVNSEV 109 (204)
Q Consensus 35 ~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~--~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 109 (204)
......+..++.+++.|+++||+|||+++...... ........... . +.+++.+++.+.+.+...+...+++.|+
T Consensus 57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~ 136 (1140)
T PRK06814 57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDH 136 (1140)
T ss_pred HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhh
Confidence 33333444789999999999999999975332211 11111111111 2 6677788888988888899999999999
Q ss_pred cCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 110 YREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 110 ~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
+|+++|++++|+......+|..++|.+.+.+....+|+..|+. ..+..+..++..+++|++
T Consensus 137 ~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 137 LNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVAL-LMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred cCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH-HHHHHHHHHHHHhhCCCC
Confidence 9999999999999999999999999999999999999877733 333333334445556655
No 128
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.52 E-value=4.2e-13 Score=103.77 Aligned_cols=148 Identities=15% Similarity=0.053 Sum_probs=103.4
Q ss_pred hhhhhhhhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHH-H-HHHH-
Q 041627 5 QQFTGINTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV-L-LSWA- 80 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~-~-~~~~- 80 (204)
......+....+.|.+. ++.|.++.+.+......... ..++.++.|+++||+|||+.+.....+..+... . ....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T TIGR00883 230 ATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLIL-FFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD 308 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445566778889888 45788888767666665555 899999999999999999987655444333221 1 1111
Q ss_pred -H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHH-HHHHHHHHHHHHHHHHHHHhhC-cchhhhHH
Q 041627 81 -F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSA-TVNWISNLIVAQNFLTVADLVG-TGSTFLIL 153 (204)
Q Consensus 81 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (204)
. ..........+...+...+....+..|.+|+++|+++.++.. ....+++.++|.+.+.+.+..| |+..++..
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 1 223333444455555666778899999999999999999854 4456788899999999999888 65554443
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.51 E-value=6.7e-13 Score=103.54 Aligned_cols=156 Identities=14% Similarity=0.097 Sum_probs=111.9
Q ss_pred hHHhhhHHHHHHcCCCchhh----hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 12 TVMYYSPTIVQMAGFQSNQL----ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
....+.|.+.++.+.+..+. +........+ ..++.+..|+++||+|||+.+..+.....+..+...... +...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~-~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVA-ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 44556677777654443332 2222233333 677888899999999999998887776665554444333 3344
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
+...+.+.+.+...+.......+..|+++|++.+++......+|..++|.+.+.+.+..+|+..|++.+++.++..+...
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 44555566666666667777888899999999999999999999999999999999999999999988887777766554
Q ss_pred hhc
Q 041627 166 LFV 168 (204)
Q Consensus 166 ~~~ 168 (204)
+..
T Consensus 396 ~~~ 398 (408)
T PRK09874 396 NSL 398 (408)
T ss_pred HHH
Confidence 443
No 130
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.50 E-value=1.5e-12 Score=101.21 Aligned_cols=167 Identities=16% Similarity=0.123 Sum_probs=114.4
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhH--HHHHHHHHHHHHHHh-hhhhccccchHhHHHhhHHH-HHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLP--SLVVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGV-IISLVLLS 78 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~grr~~~~~~~~~~-~~~~~~~~ 78 (204)
++.|...+....+++|.++++.|.+.++.+.+. ...... ..+.+++. ++..||+||||.+++...+. ..+.....
T Consensus 10 y~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~-~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~ 88 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVV-KFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLA 88 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHH
Confidence 466777778888999999999999999988863 334444 77777777 55899999999865554332 21222222
Q ss_pred H---HH---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhH
Q 041627 79 W---AF---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLI 152 (204)
Q Consensus 79 ~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 152 (204)
. .. ............+.....+....+..|..++++++...+.......+|..+++...+.+.+..+|+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~ 168 (390)
T TIGR02718 89 LVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLL 168 (390)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 1 11 22222233333344444455666778888888888877777777788889999888889999999999998
Q ss_pred HHHHHHHHHHHHHhhccC
Q 041627 153 LAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 153 ~~~~~~i~~~~~~~~~~e 170 (204)
.+.+.++..+...+..||
T Consensus 169 ~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 169 VACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 888777665554444344
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.50 E-value=6.5e-13 Score=103.24 Aligned_cols=138 Identities=15% Similarity=0.119 Sum_probs=102.5
Q ss_pred hHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---HHHHHH
Q 041627 12 TVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---ISVIGL 87 (204)
Q Consensus 12 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 87 (204)
....+.|.+.+ +.|.+..+.+...+....+ ..++.++.|++.||+|||+.+..+.....+......... ......
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~-~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIG-AIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLG 334 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 44456677765 5799988878777776666 899999999999999999988777655433222221111 222333
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTF 150 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~ 150 (204)
..+.+....+..+..+.++.|.+|+++|+++.|+.+....+++.++|.+.+.+.+..| |...+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 335 LFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTAL 398 (405)
T ss_pred HHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 3444555556667777889999999999999999999999999999999999999988 65443
No 132
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.50 E-value=3.8e-13 Score=105.27 Aligned_cols=152 Identities=15% Similarity=0.086 Sum_probs=100.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHHc--CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhH-HHhhHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMA--GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLA-LSSLAGVIISLVLLSW 79 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-~~~~~~~~~~~~~~~~ 79 (204)
+++...+++.+..|+|.++++. |.++.+.+......... ..++.++.|+++||++||+.. ........+.......
T Consensus 251 ~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~-~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 329 (412)
T TIGR02332 251 YFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFC-TIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASA 329 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHH-HHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHh
Confidence 3455667788899999999985 55666656655555555 899999999999999977753 3333333322211111
Q ss_pred HH-HHH-HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHH
Q 041627 80 AF-ISV-IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAG 155 (204)
Q Consensus 80 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ 155 (204)
.. ... .....+...+.....+..+....|.+|+++|++++|+.+...++|+.++|.+.+.+.+..| |...+++.++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 330 TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 11 111 1111111111112223345566788999999999999999999999999999999988875 7777665444
No 133
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.50 E-value=9.7e-13 Score=103.76 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=115.1
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc----cccchHhHHHh-hHHHHHHHHHHHHHH-
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLID----HFGRKKLALSS-LAGVIISLVLLSWAF- 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~~~~~-~~~~~~~~~~~~~~~- 81 (204)
.++.....+++.|.+++|.+....+....+.... ..+.+++.|+++| |+|||+.++.. .....++...+.+..
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~-~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLS-GLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 3455667788889999999998888877777776 8999999999999 59999998775 444444444443321
Q ss_pred -H----------------HH-HHHHHHHHHhcccccccchhhcccccCCcch--hhhhhHHHHHHHHHHHHHHHHHHHH-
Q 041627 82 -I----------------SV-IGLALYITFFAPGMGPVPWTVNSEVYREQYR--GICGGMSATVNWISNLIVAQNFLTV- 140 (204)
Q Consensus 82 -~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~- 140 (204)
. .. +....+.........+...++++|.+|+++| +.+.++.....++|+.+++.+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~ 176 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSG 176 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 11 1111222334444556677999999998866 5788888888899999988888754
Q ss_pred -HHhh-------------CcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 141 -ADLV-------------GTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 141 -~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.+.+ +.+..|++.+++.+++.++..+..||.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 177 LYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 2211 3456777777777777777777788864
No 134
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.50 E-value=1.9e-13 Score=109.60 Aligned_cols=149 Identities=18% Similarity=0.101 Sum_probs=107.0
Q ss_pred HhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHH
Q 041627 14 MYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYI 91 (204)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 91 (204)
..-++.+.++.|-++.. .++.+..... ..+++++.|.++|.+|||..++.+.++.+++.++.+... ..++....+.
T Consensus 64 a~~l~~I~~diG~~~~~-~w~~~~~~l~-~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 64 ASILPYINADIGGSDNW-SWFSTAWTLA-SAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHHhcCCCccc-hHHHHHHHHH-HHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 34457777888877654 6666655555 899999999999999999999999999999998877665 4444445555
Q ss_pred HHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 92 TFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 92 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
+.+. +........++|..|.+.|..+.++...........++.+...+....+|||.|++..+...+.++...
T Consensus 142 Gvga-G~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 142 GVGA-GVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHhh-HHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 5543 333445566899999999987776665544344445566665555566899999998887777655433
No 135
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.49 E-value=6.4e-13 Score=104.61 Aligned_cols=163 Identities=17% Similarity=0.115 Sum_probs=111.2
Q ss_pred hhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHh-HHHhhHHHHHHHHHHHHHH-
Q 041627 9 GINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKL-ALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~-~~~~~~~~~~~~~~~~~~~- 81 (204)
....+..|++.+.+ ++|.++.+.+...++.... .++..++.|+++|| +||||. ++.+.....++.+.+...+
T Consensus 14 ~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~-~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~ 92 (437)
T TIGR00792 14 IFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARIL-DAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD 92 (437)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH-HHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC
Confidence 34455556665555 5899999988888888777 89999999999998 677554 5566666666555554322
Q ss_pred -------HHHHHHHHHHHHhcccccccchhhccccc-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-------hhCc
Q 041627 82 -------ISVIGLALYITFFAPGMGPVPWTVNSEVY-REQYRGICGGMSATVNWISNLIVAQNFLTVAD-------LVGT 146 (204)
Q Consensus 82 -------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~ 146 (204)
........+.+.+.........++..|.. ++++|++..++......+|+.+++.+.+.+.. ..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~ 172 (437)
T TIGR00792 93 FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGW 172 (437)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccH
Confidence 12223333344444444555567788887 56889999999888888888777766555443 3468
Q ss_pred chhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 147 GSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 147 ~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
+..+.+.+++..+..+...+..||++
T Consensus 173 ~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 173 FMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 77787777777766666666667754
No 136
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.9e-13 Score=106.24 Aligned_cols=150 Identities=21% Similarity=0.189 Sum_probs=124.8
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccc
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGP 100 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 100 (204)
+.+....+.+...+++..+ .+++.++++.+.||++-.+.+....+...+..+...... ..+++.+++.|.+.++.+|
T Consensus 75 dl~~~~~~l~~~~t~F~v~-Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVG-YIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred ccchhhhhhhhHHHHHHHH-HHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence 4456666778888888777 899999999999999977666665555555444433322 7888999999999999999
Q ss_pred cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH------HhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 101 VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA------DLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 101 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
....+++.++.+++|++.+|+......+|+++++.+...+. ...||++.|++-+++.++..+++++++|+.+.
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999999999999999999999999999987753 34689999999999999988888889998765
No 137
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.47 E-value=2.2e-16 Score=124.73 Aligned_cols=140 Identities=23% Similarity=0.222 Sum_probs=109.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcccccccchhhc
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----ISVIGLALYITFFAPGMGPVPWTVN 106 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (204)
++..+....+ ..+|+++.|+++||+|||+.+..+..+..++.++..+.+ ..+...+++.|.+.++..+....++
T Consensus 49 ~~~~~~~~~g-~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~ 127 (451)
T PF00083_consen 49 SLLTSSFFIG-AIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYI 127 (451)
T ss_pred HHHHHHHHhh-hcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4555666666 899999999999999999999999999888888776654 5667778888999999999999999
Q ss_pred ccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh---hCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 107 SEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL---VGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 107 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
.|..|+++|++..++......+|..++..+.....+. .+||..+....++.++. .+..+++||+++
T Consensus 128 ~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~ 196 (451)
T PF00083_consen 128 SEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPR 196 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 9999999999999998888877777766655433222 34887777766665544 344567899854
No 138
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.47 E-value=2.2e-12 Score=99.43 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=100.4
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccch---HhHHH-hhHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRK---KLALS-SLAGVIISLVLLS 78 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---~~~~~-~~~~~~~~~~~~~ 78 (204)
.++....++++..|+|+++++.|++.. .+........ .+.+..++++||.+|| +.... ...+..+......
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~----~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~ 275 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAIL----AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALA 275 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHH----HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 566777888999999999998887754 3443333333 3344457888887654 33222 2222222222222
Q ss_pred HHH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 79 WAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
... ........+.+.+.....+..+.+.+|.+|++.|+++.|+.+..+++++..+|.+.+.+.. +....|.++++.
T Consensus 276 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~ 353 (368)
T TIGR00903 276 FELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAIL 353 (368)
T ss_pred HccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 211 2222233334444555556677899999999999999999999999999999999887763 555667777777
Q ss_pred HHHHHHHH
Q 041627 157 AVLAVVFV 164 (204)
Q Consensus 157 ~~i~~~~~ 164 (204)
.+++.+..
T Consensus 354 ~~i~~~~~ 361 (368)
T TIGR00903 354 ITIAFAIA 361 (368)
T ss_pred HHHHHHHH
Confidence 76665554
No 139
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.47 E-value=2.3e-12 Score=102.96 Aligned_cols=160 Identities=11% Similarity=0.055 Sum_probs=109.1
Q ss_pred hhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH---HHH---HH
Q 041627 11 NTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS---WAF---IS 83 (204)
Q Consensus 11 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~---~~ 83 (204)
+....+.+.+. ++.|++..+.+...........+++.+++|+++||+|||+.+..+..+..+....+. ... ..
T Consensus 239 ~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~ 318 (491)
T PRK11010 239 AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYS 318 (491)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 33445566665 568999999887765555444899999999999999999877665554444332221 111 11
Q ss_pred HHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 163 (204)
+....++...+.+...+...++..+..|++.+++..++.+....+|+.+++.+.|.+.+..||+..|.+..++.+.+.+.
T Consensus 319 l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~ 398 (491)
T PRK11010 319 MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLL 398 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 11122222222222334457888899999999999999999999999999999999999999988887777777666544
Q ss_pred HHhhccCC
Q 041627 164 VILFVPET 171 (204)
Q Consensus 164 ~~~~~~e~ 171 (204)
..+ ++++
T Consensus 399 ~~~-~~~~ 405 (491)
T PRK11010 399 LLV-CRQT 405 (491)
T ss_pred HHH-HHhc
Confidence 433 3443
No 140
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.46 E-value=4e-13 Score=107.02 Aligned_cols=152 Identities=12% Similarity=0.062 Sum_probs=91.5
Q ss_pred hhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchH-------hHHHhhHHHHHHHHHHHHHH
Q 041627 10 INTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKK-------LALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~~~~~~ 81 (204)
.+.+..+.|.++.+ +|++..+.+.+.+..... ..++.++.|+++||++||+ .......+..+.........
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~-~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~ 346 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLM-NLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN 346 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc
Confidence 34556778888654 699988877766666666 8999999999999998762 22222222222222221111
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
........+.+.+.....+..+.+..|.. +++|+++.|+.+..+.+|+.+++.+.+ ..+..+|+..|++.+++.++
T Consensus 347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 347 SLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHH
Confidence 11222222233333333344556666765 478999999998877777777776653 11233577788887777666
Q ss_pred HHHHH
Q 041627 160 AVVFV 164 (204)
Q Consensus 160 ~~~~~ 164 (204)
+.+..
T Consensus 425 ~~~~~ 429 (476)
T PLN00028 425 CTLPV 429 (476)
T ss_pred HHHHH
Confidence 65443
No 141
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.46 E-value=1.8e-12 Score=98.47 Aligned_cols=166 Identities=17% Similarity=0.227 Sum_probs=129.0
Q ss_pred hhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-
Q 041627 4 FQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~- 81 (204)
+...-|.++.......+.. ++|+++.+........... +++|+++.|++.||+|.|+++..+.++..+.++...+..
T Consensus 262 ~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vv-A~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~ 340 (438)
T COG2270 262 FFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVV-AALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG 340 (438)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc
Confidence 3445577788888888887 7999999966555555555 899999999999999999998888877776655544433
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc-chhhhHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT-GSTFLILAGIAVL 159 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i 159 (204)
...+...++.+.+.++.++.+-+|..+..|+++-++.+|+++..+...++++|.+.+.+.+.+|. |..+.....+..+
T Consensus 341 ~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~i 420 (438)
T COG2270 341 ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLI 420 (438)
T ss_pred cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 56666778888999999999999999999999999999999999999999999999999888773 4444444444444
Q ss_pred HHHHHHhhccCC
Q 041627 160 AVVFVILFVPET 171 (204)
Q Consensus 160 ~~~~~~~~~~e~ 171 (204)
.. ..+...|+.
T Consensus 421 Gl-~~L~~v~~~ 431 (438)
T COG2270 421 GL-LLLLRVKVP 431 (438)
T ss_pred hH-hhEEeecCC
Confidence 43 334445544
No 142
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2.8e-12 Score=102.14 Aligned_cols=158 Identities=16% Similarity=0.194 Sum_probs=128.8
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHH-HH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISV-IG 86 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 86 (204)
.+.+..+.+.+.++++.+..+.++..++.... ..+.+++.+.+.||+|.|++.+.+.++..++.+...++. +.+ +.
T Consensus 62 ~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~-~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 62 INSFGLLFEELMDYFGSSSSQIAWIGSLLLGV-YLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred hheehhhHHHHHHHhCCCccHHHHHHHHHHHH-HHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 35556778889999999999888888888888 799999999999999999999999999999998888876 333 33
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHh
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVIL 166 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 166 (204)
..++.|.+.+..+....+.+...| +++|+.+.|+......+|.++-|.+...+.+..|||+.+++.+.+.+-.++....
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~ 219 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGAL 219 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555656666555 6889999999999999999999999999999999999999988888766665555
Q ss_pred hcc
Q 041627 167 FVP 169 (204)
Q Consensus 167 ~~~ 169 (204)
..|
T Consensus 220 ~rp 222 (509)
T KOG2504|consen 220 LRP 222 (509)
T ss_pred cCC
Confidence 555
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.44 E-value=4e-12 Score=101.70 Aligned_cols=154 Identities=14% Similarity=0.059 Sum_probs=117.6
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH------
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF------ 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------ 81 (204)
.|......-.+.+..+..-|+...+........- .++.++++|.++||++||++++.+-.+..+....+....
T Consensus 24 lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP-~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~ 102 (524)
T PF05977_consen 24 LGDWMQTVALAWLVTQLTGSPLMVALVQAASTLP-ILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLS 102 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 3444444555666666666766666655555444 788999999999999999999998877765554443322
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
+.++...++.+.+.....|...+.+.|+.|+++...+.++.....++...+||.++|.+....|....|.+.+...++.
T Consensus 103 ~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~ 182 (524)
T PF05977_consen 103 PWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS 182 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666777787877888999999999999999999999999999999999999999999888777887766655554
Q ss_pred HH
Q 041627 161 VV 162 (204)
Q Consensus 161 ~~ 162 (204)
..
T Consensus 183 i~ 184 (524)
T PF05977_consen 183 IL 184 (524)
T ss_pred HH
Confidence 33
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.44 E-value=7.4e-12 Score=97.08 Aligned_cols=154 Identities=13% Similarity=-0.035 Sum_probs=121.2
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
....+...+..+.|.+.++.|.++.+.+......... ..++.++.+++.||+|+|+.+..+.+...+....+.+.+ +
T Consensus 216 l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~-~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T TIGR00902 216 LIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLA-EIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFP 294 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHH-HHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHH
Confidence 3445566777888999999999999988887765555 889999999999999999999988888888777666554 4
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHH-HHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSAT-VNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAV 161 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (204)
.+.....+.+...+...+....++.+. |+++|+++.++.+. ...+|..+++.+.|.+.+..|+ ..|+..+.+.+++.
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 455556666766666667777888888 99999999998764 5568899999999999999885 56666666665553
No 145
>PRK10504 putative transporter; Provisional
Probab=99.44 E-value=3e-12 Score=101.85 Aligned_cols=140 Identities=12% Similarity=0.127 Sum_probs=101.7
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--- 81 (204)
...+......+.|.+.+. .|.++.+.+......... ..++.++.+++.||+|||+.+..+..+..+....+....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
T PRK10504 273 GRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLG-SMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG 351 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc
Confidence 334445556678888875 788888766665544444 677889999999999999998888776666655544321
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
........+.+.+.+...+....+..+..|++.|+++.++.+....+|..+++.+.+.+.+..++
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11222333444444455566668888899999999999999999999999999999988777654
No 146
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.42 E-value=1e-11 Score=97.44 Aligned_cols=164 Identities=13% Similarity=0.140 Sum_probs=110.0
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH-HH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-AF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~ 81 (204)
+++.+.++.++..++|.+.++ .++... .........+...+..+++|+++||+|+|+++.++.+...++...... .+
T Consensus 261 y~~tFG~fvg~s~~lp~~~~~-~~~~~~-~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp 338 (462)
T PRK15034 261 YLATFGSFIGFSAGFAMLAKT-QFPDVN-ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP 338 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcChHH-HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 466777777888899999876 333332 222222333447889999999999999999998888766666543221 11
Q ss_pred -------HHHHHHHHHHHHhcccccccchhhcccccCC---------------------cchhhhhhHHHHHHHHHHHHH
Q 041627 82 -------ISVIGLALYITFFAPGMGPVPWTVNSEVYRE---------------------QYRGICGGMSATVNWISNLIV 133 (204)
Q Consensus 82 -------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~r~~~~~~~~~~~~~g~~~~ 133 (204)
.......+....+.+.-....+-++.+.+|+ ++-|.+.|+....+.+|+++.
T Consensus 339 ~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~ 418 (462)
T PRK15034 339 GTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFI 418 (462)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchh
Confidence 2222222222333344445566677777774 156678889999999999999
Q ss_pred HHHHHHHHHhhC-cchhhhHHHHHHHHHHHHHHhhc
Q 041627 134 AQNFLTVADLVG-TGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 134 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
|.+.+...+..| +...++.+.+..+++.++.+.+.
T Consensus 419 p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 419 PQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988887766 66678888888888877666543
No 147
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.42 E-value=9.8e-13 Score=100.70 Aligned_cols=171 Identities=19% Similarity=0.142 Sum_probs=114.6
Q ss_pred hhhhhhhhhHHhhhHHHHHHc-CC------CchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMA-GF------QSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL 76 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 76 (204)
|......+.+....|.+-.-+ |. .++.....+.....++.++|+++.|++.||+|||+++...+++++++.++
T Consensus 51 ftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~ 130 (538)
T KOG0252|consen 51 FTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSAL 130 (538)
T ss_pred cccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHH
Confidence 333444455555556554432 22 22333445556666668999999999999999999999999999998886
Q ss_pred HHHHH---------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH----h
Q 041627 77 LSWAF---------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD----L 143 (204)
Q Consensus 77 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----~ 143 (204)
..... .++...|++.|++.++-+|...+..+|....+.||.-.+........|...+..+.-.+.. .
T Consensus 131 ~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~ 210 (538)
T KOG0252|consen 131 SGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKI 210 (538)
T ss_pred hccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhcc
Confidence 55432 6778889999999999999999999999999999988876655555544444333322221 1
Q ss_pred h-----------CcchhhhHHHHHHHHHHHHHHhhccCCCCcC
Q 041627 144 V-----------GTGSTFLILAGIAVLAVVFVILFVPETQGLT 175 (204)
Q Consensus 144 ~-----------~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~ 175 (204)
. =||..+.+ +.++.+...+..+.+|||++.+
T Consensus 211 ~~~~~~~~~ld~vWRl~~gl-g~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 211 FNGPSTYPHLDGVWRIIFGL-GAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred CCCCCCchHHHHHHHHHHHH-HHHHHHHHHHhhhcCCcchhHH
Confidence 1 15544443 4444444445555678886543
No 148
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.42 E-value=9.9e-12 Score=96.60 Aligned_cols=155 Identities=15% Similarity=0.016 Sum_probs=106.0
Q ss_pred hhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH-HH----
Q 041627 7 FTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-AF---- 81 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~---- 81 (204)
..+......+.+.+.++.|+++++.+............++.++.|++.||+|+|+.+..+..+..+....... ..
T Consensus 221 ~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 300 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLA 300 (390)
T ss_pred HHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccC
Confidence 3444556667788888999999998887776655446788999999999999999887766554332222211 11
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCC-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYRE-QYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIA 157 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (204)
........+.+...+...+.......+..++ +.|++.+++.+...++|..++|.+.+.+.+..|++..|...+.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~ 380 (390)
T TIGR02718 301 PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLA 380 (390)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 1111111222222333334445555566655 889999999999999999999999999999999887777766555
Q ss_pred HHHH
Q 041627 158 VLAV 161 (204)
Q Consensus 158 ~i~~ 161 (204)
+++.
T Consensus 381 l~a~ 384 (390)
T TIGR02718 381 VLAI 384 (390)
T ss_pred HHHH
Confidence 5543
No 149
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.42 E-value=4.1e-12 Score=96.42 Aligned_cols=162 Identities=19% Similarity=0.320 Sum_probs=126.9
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
++..+.++-++..++|.++++ +|.++.+.+......... +.+..+.+|+++||+|.+|++......++++..+.....
T Consensus 227 Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~-g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 227 YFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLI-GALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHH-HHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccc
Confidence 456777888899999999875 899999878777777777 899999999999999999999988888888777665542
Q ss_pred ---------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhh
Q 041627 82 ---------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFL 151 (204)
Q Consensus 82 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~ 151 (204)
.......+..+.+.+.-....+.++..++|+ +-|.+.|+....+.+|++.-|...+...+..| +...|+
T Consensus 306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~ 384 (417)
T COG2223 306 TGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFM 384 (417)
T ss_pred cccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHH
Confidence 2233334444455555556667788888865 56779999999999999999999999999988 777888
Q ss_pred HHHHHHHHHHHHHHh
Q 041627 152 ILAGIAVLAVVFVIL 166 (204)
Q Consensus 152 ~~~~~~~i~~~~~~~ 166 (204)
++....+++.+..+.
T Consensus 385 ~~~~~~~~a~v~~~~ 399 (417)
T COG2223 385 LLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887777665443
No 150
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.41 E-value=6.2e-12 Score=99.01 Aligned_cols=136 Identities=12% Similarity=0.135 Sum_probs=93.0
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---HHHHHH
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 87 (204)
+....+.+.+.+....++.+.+....... ...+++.++.++++||+|||+.+..+..+.+++........ ......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T TIGR00792 239 NIKNGVQVYYFTYVLGDPELFSYMGSIAI-VAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVL 317 (437)
T ss_pred HHHcchhheeEeeecCChHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence 33333444444432223444454544444 44789999999999999999998888777766655544322 223333
Q ss_pred HHHHHHhcccccccchhhcccccC-------CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcc
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYR-------EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTG 147 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 147 (204)
..+.+.+.+...+..+++.+|..| ++.+|+..|+.+....++..+++.+.+.+.+..|+.
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344455555556777788888765 566899999999999999999999999998877763
No 151
>TIGR00895 2A0115 benzoate transport.
Probab=99.39 E-value=7e-12 Score=97.14 Aligned_cols=135 Identities=19% Similarity=0.239 Sum_probs=99.7
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--I 82 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~ 82 (204)
......+....+.|.+.++.|.++.+.+...+....+ ..++.++.|+++||+|||+.................... .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (398)
T TIGR00895 261 MLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFG-GVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPT 339 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 3444556777888988888999988877776666666 899999999999999999554433333332222222122 3
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
......++.+.+.+...+....+..|.+|+++|+++.|+......+++.++|.+.+.+
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 340 LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3444455666666667777889999999999999999999999999999999988764
No 152
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.38 E-value=2.8e-12 Score=99.35 Aligned_cols=161 Identities=15% Similarity=0.002 Sum_probs=129.3
Q ss_pred hhhhhhhhhHHhhhHHHHHH-cC----CCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQM-AG----FQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLL 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~ 77 (204)
+.+-.++|++...+..|+.. .+ +++++...+.+.+... --...+++||++|| +|+|+.+.++.++..++.+++
T Consensus 31 ~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~sl-VY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L 109 (498)
T COG3104 31 LWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSL-VYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVL 109 (498)
T ss_pred HHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHH-HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 34556788888888877754 55 8888877777777777 57799999999999 599999999999999998888
Q ss_pred HHHH----HHHHHHHHHHHHhcccccccchhhcccccCCcc--hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhh
Q 041627 78 SWAF----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQY--RGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFL 151 (204)
Q Consensus 78 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 151 (204)
.... ..+.+...+...+.+..-+....++.|.+|+++ |-.++++.+...++|++++|.+.+++.+..||+..|.
T Consensus 110 ~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~ 189 (498)
T COG3104 110 AISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFG 189 (498)
T ss_pred hccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHH
Confidence 7762 345555555667777777888899999998543 6668888889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHH
Q 041627 152 ILAGIAVLAVVFVI 165 (204)
Q Consensus 152 ~~~~~~~i~~~~~~ 165 (204)
..++-+.++.+..+
T Consensus 190 ~aavGm~~gl~~f~ 203 (498)
T COG3104 190 LAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777777655433
No 153
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.36 E-value=1.8e-11 Score=93.76 Aligned_cols=130 Identities=13% Similarity=0.021 Sum_probs=102.5
Q ss_pred hhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---HHHHHHHHH
Q 041627 15 YYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---ISVIGLALY 90 (204)
Q Consensus 15 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 90 (204)
.+.|.+.++ +|.++.+.+........+ ..++.++.+++.||+|||+.+..+..+..++........ +......++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLG-ALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Confidence 778888876 788888877777666665 789999999999999999988877666655555444332 233344555
Q ss_pred HHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 91 ITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 91 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
.+.+.+...+....+..|..|+++|+++.++.+....+++.+++.+.+.+.+..|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5666666677788899999999999999999999999999999999999887653
No 154
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=1.5e-10 Score=88.57 Aligned_cols=161 Identities=18% Similarity=0.201 Sum_probs=116.8
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
.++.+.+.+...+|...++++ .|++.+..++..-.+..+ ..+|..++|+++|| +.|+.+.....+..+....+.+..
T Consensus 220 t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~-~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~ 297 (394)
T COG2814 220 TFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIA-GFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG 297 (394)
T ss_pred HHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHH-HHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc
Confidence 355667777777777766665 788998888888777777 79999999999999 888888877777666666655544
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAV 158 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (204)
........+.+..............++ .-++.+..+.++.....++|..+|..+++.+.+++|+....+..+...+
T Consensus 298 ~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~ 376 (394)
T COG2814 298 ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLL 376 (394)
T ss_pred chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Confidence 222222222233332222333344555 3368899999999999999999999999999999999888888777777
Q ss_pred HHHHHHHh
Q 041627 159 LAVVFVIL 166 (204)
Q Consensus 159 i~~~~~~~ 166 (204)
++.++...
T Consensus 377 ~a~~~~~~ 384 (394)
T COG2814 377 LALLLALL 384 (394)
T ss_pred HHHHHHHH
Confidence 77655443
No 155
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.35 E-value=1.3e-11 Score=95.04 Aligned_cols=144 Identities=19% Similarity=0.252 Sum_probs=97.4
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc-chHhHH-Hhh-HHHHHHHHHHHH--
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG-RKKLAL-SSL-AGVIISLVLLSW-- 79 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~~~-~~~-~~~~~~~~~~~~-- 79 (204)
.....+.+..+.|.+.++ .|.++.+.+...+..... ..++.++.|+++||.. ||+... ... .....+......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (379)
T TIGR00881 228 VYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELG-GLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP 306 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-cchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc
Confidence 344456677788888765 788888877777666665 7999999999999864 333222 111 111111111111
Q ss_pred H-H-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 041627 80 A-F-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTF 150 (204)
Q Consensus 80 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 150 (204)
. . .......+..+....+..+....+..|..|+++|+++.|+.+....+++.++|.+.+.+.+..||+..|
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 307 AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 0 1 222233334444444445556678899999999999999999999999999999999999999987653
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.34 E-value=4.1e-11 Score=92.00 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=100.5
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-cchHhHHHhhHHHHHHHHHHHHHH-HH
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAF-IS 83 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~-~~ 83 (204)
....++....|+|.+.++.|.+..+.+...+....+ .++++++.|++.||+ +||+.+..+..+..++........ ..
T Consensus 209 ~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~-~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILISHGASAATAGSLLALMQLA-QAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHG 287 (355)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 344566777899999999999988878777777666 899999999999999 566666666666665555444432 11
Q ss_pred HHHHHHHHHHhcccccccchhhcccc-cCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEV-YREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
......+.+.+.+...+.......+. .+++++++..++.+....+++.++|.+.+.+.+..|
T Consensus 288 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 288 LWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22233445555555556655555544 446677889999999889999999999999998877
No 157
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=4.5e-11 Score=95.74 Aligned_cols=151 Identities=15% Similarity=0.072 Sum_probs=119.0
Q ss_pred hHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHH
Q 041627 12 TVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLA 88 (204)
Q Consensus 12 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 88 (204)
.+...+|.+.++ +|.+....+.+.+....+ .++|+++.+++.+|+++++.+..+.+..+++.+.+.+.. +......
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvG-ai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVG-AILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 344567888765 788888889988888877 899999999999999999988888887777777666654 3344444
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHH
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 163 (204)
++.|.+.....+...+...+..|++.||++.++..+....+..+|..+.|.+.+.+|.+..+.+.++..++..++
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 555665555566667888999999999999999999999999999999999999999877777665554444443
No 158
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.6e-10 Score=90.31 Aligned_cols=137 Identities=13% Similarity=0.013 Sum_probs=92.3
Q ss_pred hhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-------H
Q 041627 11 NTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-------I 82 (204)
Q Consensus 11 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-------~ 82 (204)
.....+.|.+.+ ++|.++.+.+........+ ..++.++.++++||+++|+.+..+.....++........ .
T Consensus 232 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~-~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 310 (406)
T PRK15402 232 LAWIALSPVILISGEQLSSYEYGLLQVPVFGA-LIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYL 310 (406)
T ss_pred HHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH
Confidence 344455677764 4788888767665555444 788999999999999999988887766665555443321 2
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGST 149 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (204)
.......+.+.+.+...+........ .++++|++..+..+....++..+++.+.+.+.+..++...
T Consensus 311 ~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 376 (406)
T PRK15402 311 WLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLF 376 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Confidence 22333334444444334443333333 3458999999999999999999999999988777775443
No 159
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.30 E-value=2.5e-10 Score=88.54 Aligned_cols=154 Identities=13% Similarity=0.102 Sum_probs=96.6
Q ss_pred hhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH-HH--HHHHH
Q 041627 11 NTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW-AF--ISVIG 86 (204)
Q Consensus 11 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~--~~~~~ 86 (204)
+....+.+.+.+ ..|.++.+.+...+..... ..++.++.|++.||+|+|+.+..+..+..++.+.... .. .....
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~-~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 294 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLG-MVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLI 294 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 333445555554 5899988877777777666 8999999999999999999888777766665544432 22 22222
Q ss_pred HHHHHHHhccccccc-chhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hCcchhhhHHHHHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPV-PWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL-VGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~ 164 (204)
.....+.+..+..+. ......+..|++.++.+ ..+....+|..++|.+.+.+.+. .+|+..+...+.+..+.....
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 295 FAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 222222222222222 22334454555555544 34566789999999999999885 578777777666655554433
Q ss_pred Hhh
Q 041627 165 ILF 167 (204)
Q Consensus 165 ~~~ 167 (204)
..+
T Consensus 373 ~~~ 375 (382)
T PRK10091 373 LLY 375 (382)
T ss_pred HHH
Confidence 333
No 160
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.30 E-value=6.2e-11 Score=85.80 Aligned_cols=133 Identities=20% Similarity=0.162 Sum_probs=96.5
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH------
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF------ 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------ 81 (204)
...|.+..|.|.+.+++|+++++...+......+ ..+ .++.|.+.||+|.+.++.++.+...++...+....
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G-~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIG-SYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHH-hhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 3568999999999999999999977776666666 454 58899999999999999999998888877665443
Q ss_pred --HHHHHHHHHHHHhc-ccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 82 --ISVIGLALYITFFA-PGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 82 --~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
.+.+......+..+ ....+.......+.|| ++||++.|+.-....+++.+-..+...+.+.
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 22222222222222 2223444455668887 5799999999999989888877776555444
No 161
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.30 E-value=2.7e-11 Score=96.30 Aligned_cols=159 Identities=18% Similarity=0.187 Sum_probs=100.8
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhH--------HHhhHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLA--------LSSLAGVIIS 73 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~--------~~~~~~~~~~ 73 (204)
.++.+.+.+.+..|+|.++++ +|.+..+.+...+....+ ..++.++.|+++||+++|+.. ..+.......
T Consensus 270 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~-~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (465)
T TIGR00894 270 IFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF-AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPG 348 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 455666778888999999865 799988877776766666 899999999999998755321 1111111111
Q ss_pred HHHHHHH--H---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--C-
Q 041627 74 LVLLSWA--F---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV--G- 145 (204)
Q Consensus 74 ~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~- 145 (204)
....... . ........+.+.+.++..+.......|..|+ .+|.+.++.+..+.+++.++|.+.+.+.+.. +
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~ 427 (465)
T TIGR00894 349 IFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNV 427 (465)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchH
Confidence 1111111 1 1122222222333333334444555676665 8999999999999999999999998877643 2
Q ss_pred cchhhhHHHHHHHHHHHH
Q 041627 146 TGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~ 163 (204)
|...|.+.++..+++.++
T Consensus 428 ~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 428 WLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666777776666666544
No 162
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.30 E-value=7.7e-11 Score=88.88 Aligned_cols=145 Identities=12% Similarity=0.142 Sum_probs=106.7
Q ss_pred hhhhhhhhHHhhhHHHHHH---cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 5 QQFTGINTVMYYSPTIVQM---AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
+......++..|.+.|+++ +|+++.+.+...+..... ..+|.++.+++.||+|+|+.+.++..+.+++..+.....
T Consensus 151 ~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~-~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~ 229 (310)
T TIGR01272 151 VYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGG-AMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH 229 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3333456788899999975 488988878877777666 899999999999999999988777766666554333322
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLI 152 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 152 (204)
........+.+.+.+..+|...+...+..|++ .+++.++. ..+.+|+.+.|.+.|.+.|..|.+.++++
T Consensus 230 ~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 230 GYVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 22223444567777778888888888877754 44566664 56778999999999999998887777663
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=1e-10 Score=91.09 Aligned_cols=153 Identities=12% Similarity=0.084 Sum_probs=105.1
Q ss_pred hHHhhhHHHHHHc----CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHH
Q 041627 12 TVMYYSPTIVQMA----GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVI 85 (204)
Q Consensus 12 ~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 85 (204)
....+.|.+.++. +.+....+...+..... ..++.+..|++.||+|||+.+.++..+.++......... +...
T Consensus 233 ~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~-~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~ 311 (396)
T TIGR00882 233 VFDQQFANFFTSFFATPQQGTRVFGYVTTMGELL-NALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVV 311 (396)
T ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHH
Confidence 3444566676654 33444556555555545 688889999999999999998887777666555433332 3333
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhH-HHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGM-SATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
....+.+............+..+..|++.|++..+. .+....+|+.+++.+.+.+.+..|++..|.+.+++.++..++.
T Consensus 312 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 312 ILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344444444322223344566777888888887776 5677889999999999999999999888888887777665544
Q ss_pred H
Q 041627 165 I 165 (204)
Q Consensus 165 ~ 165 (204)
.
T Consensus 392 ~ 392 (396)
T TIGR00882 392 V 392 (396)
T ss_pred H
Confidence 3
No 164
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.29 E-value=2.4e-10 Score=89.28 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=91.8
Q ss_pred HHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHH---HHH---HHHHHHH---
Q 041627 18 PTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS---WAF---ISVIGLA--- 88 (204)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~--- 88 (204)
|.+.++.|+++++.+............++.++.|++.||+|||+.+..+..+..+...... ... +......
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4455668999988787766655544789999999999999999987766655544433321 211 2122211
Q ss_pred -HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHH
Q 041627 89 -LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 89 -~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 163 (204)
+..+.......+....++.+.+|.+++ +.......++...++.+.+.+.+..||+..|...+.+.++..++
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 122333333445556677777776554 44555556777767778999999999988888777766666444
No 165
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.3e-11 Score=98.38 Aligned_cols=159 Identities=19% Similarity=0.238 Sum_probs=129.0
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccch--HhHHHhhHHHHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRK--KLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~ 81 (204)
.....+++....++|.+.++.|+++.+.+.+.++.... ..++.++.|+++|+...+ ....++.+...++...+....
T Consensus 308 ~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~-~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~ 386 (509)
T KOG2504|consen 308 LFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVS-DIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT 386 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHh-hhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667888889999999999999999989988888888 999999999999998843 344445555555554444443
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAV 158 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (204)
..+.....+.+.+.+.........+.|+.+.++-..++|+...+..++..++|++.+.+.+..+ |...|+..+...+
T Consensus 387 ~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~ 466 (509)
T KOG2504|consen 387 TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFL 466 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHH
Confidence 5666677777887777778877899999999999999999999999999999999999988888 8788888777777
Q ss_pred HHHHH
Q 041627 159 LAVVF 163 (204)
Q Consensus 159 i~~~~ 163 (204)
++...
T Consensus 467 ~s~~~ 471 (509)
T KOG2504|consen 467 LSAVL 471 (509)
T ss_pred HHHHH
Confidence 76544
No 166
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.28 E-value=3e-10 Score=88.15 Aligned_cols=149 Identities=14% Similarity=0.008 Sum_probs=105.2
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHH
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIG 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~ 86 (204)
.......+.|.+.++.|.++.+.+...+..... ..+..++.+++.||+|+|+.+..+.....+......... +....
T Consensus 220 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T PRK11128 220 SHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVA-EVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIV 298 (382)
T ss_pred HhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 344566777888888999988888877766554 788999999999999999998888777776655554443 33444
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHH-HHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATV-NWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
..++.+...+...+....+..+. +++++++..+..... ..+|..++|.+.|.+.+..|+ ..++..+.+.+++
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 44555555444455566677776 566678888887643 456668999999999998886 4555555444433
No 167
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.28 E-value=2.6e-11 Score=95.43 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=110.7
Q ss_pred hhHHhhhHHHH-HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc----cccchHhHH-HhhHHHHHHHHHHHHH-H--
Q 041627 11 NTVMYYSPTIV-QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLID----HFGRKKLAL-SSLAGVIISLVLLSWA-F-- 81 (204)
Q Consensus 11 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~~~-~~~~~~~~~~~~~~~~-~-- 81 (204)
+....|++.+. +..|+++...+....+.... .++..++.|.++| |+||||..+ .+.....++...+... +
T Consensus 18 ~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~-dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 18 SLLSSYLLYFYTDVLGLSPALAGLILLVGRIW-DAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-hhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch
Confidence 33444555554 45799999988877777666 8999999999999 799877655 5666666666655533 2
Q ss_pred -------HHHHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-------Cc
Q 041627 82 -------ISVIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLV-------GT 146 (204)
Q Consensus 82 -------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~ 146 (204)
....+...+...+.........++.+|+.+ +++|.+..+.......+|..+...+.+.+.+.. +|
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~ 176 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGY 176 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHH
Confidence 122333344455555556666789999997 578999999999988888877777777666543 35
Q ss_pred chhhhHHHHHHHHHHHHHHhhccC
Q 041627 147 GSTFLILAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 147 ~~~~~~~~~~~~i~~~~~~~~~~e 170 (204)
+....+.+++..+..++..+..+|
T Consensus 177 ~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 177 RWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHHHhhhhhheeee
Confidence 566666666666666666666777
No 168
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=2.6e-10 Score=86.41 Aligned_cols=153 Identities=12% Similarity=0.023 Sum_probs=120.3
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----HHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----ISV 84 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~~ 84 (204)
........|.+.+.++.+..+.+........+ ..+.++..+++.+|+|+|+.++.++.++++++.+..-.. ..+
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~g-Yf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGG-YFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHH-HHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 34455677888888999999977777777776 899999999999999999999999999999988875433 334
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-------------------hC
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL-------------------VG 145 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------------~~ 145 (204)
+...+..+.+.+...+....+++.+.|++.-..-+.+...++.+|++++|.+.+.+... -.
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~ 187 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASS 187 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHh
Confidence 44445556666666788889999999998888899999999999999999999887662 12
Q ss_pred cchhhhHHHHHHHHHHHH
Q 041627 146 TGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~ 163 (204)
++.++...+....+..+.
T Consensus 188 v~~pYl~~~~~lvll~v~ 205 (422)
T COG0738 188 VQFPYLILAGLLVLLAVL 205 (422)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 566777666665555443
No 169
>PRK09669 putative symporter YagG; Provisional
Probab=99.27 E-value=5.3e-11 Score=94.15 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=101.7
Q ss_pred hhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHhH-HHhhHHHHHHHHHHHHHH---
Q 041627 11 NTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKLA-LSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 11 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~~-~~~~~~~~~~~~~~~~~~--- 81 (204)
..+..|++.+.+ .+|++....+....+.-.. ..+..++.|+++|| +||||.. +.+.+...+........+
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~-dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~ 104 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVL-DAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFG 104 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCC
Confidence 444566665555 5899999988888887777 89999999999998 7775554 455555555544333221
Q ss_pred -----HHHHHHHHHHHHhcccccccchhhccccc-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-------Ccch
Q 041627 82 -----ISVIGLALYITFFAPGMGPVPWTVNSEVY-REQYRGICGGMSATVNWISNLIVAQNFLTVADLV-------GTGS 148 (204)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~ 148 (204)
....+...+...+.........++.+|+. ++++|.+..+.......+|+.+++.+...+.... +|+.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 105 ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 22222233333333344555568888987 5688998888888888888877776554444332 4555
Q ss_pred hhhHHHHHHHHHHHHHHhhccCC
Q 041627 149 TFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 149 ~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
.+.+.+++..+..+.+++..+|.
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEe
Confidence 55555655555544455555554
No 170
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.27 E-value=1.6e-10 Score=101.07 Aligned_cols=161 Identities=17% Similarity=0.151 Sum_probs=108.4
Q ss_pred hhhhHHhhhHHHHHH-cCCCch-hhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHH
Q 041627 9 GINTVMYYSPTIVQM-AGFQSN-QLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISV 84 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 84 (204)
..+....+.|.+.++ +|.+.. ..+++.+....+ .+++.++.|+++||+++|+.+.++.++.+++.+.+.... ...
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig-~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIG-IGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASV 325 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHH
Confidence 334556667777654 788888 767766666655 799999999999999999888777776666655554433 334
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hCcchhhhHHHHHHHHHHHH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL-VGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 163 (204)
.+..++.+.+.+...+...+++.+..|++.||+++|+.+....+++.+++.+.+.+... .++...+++.+.+.++..+.
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1146)
T PRK08633 326 LVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLY 405 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 44455556666666667778899999999999999999999998887777666554331 23333444444443333333
Q ss_pred HHhhccC
Q 041627 164 VILFVPE 170 (204)
Q Consensus 164 ~~~~~~e 170 (204)
.....|+
T Consensus 406 ~~~~~~~ 412 (1146)
T PRK08633 406 TLLLLPD 412 (1146)
T ss_pred HHHHhHH
Confidence 3333443
No 171
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.26 E-value=1.5e-10 Score=92.87 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=104.6
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--- 81 (204)
.....++...+.|.++++ +|.++.+.+......... ..++.++.|++.||+|||+.+..+..+..++...+....
T Consensus 271 ~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~-~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~ 349 (495)
T PRK14995 271 AMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVA-SGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFST 349 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 344556677788888876 799998877776666555 799999999999999999988877777666655443321
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
+.......+.+.+.+...+.......+..|+++++.+.++.+....+|+.+++.+.+.+.+.
T Consensus 350 ~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 350 QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334455556666666666677778889999999999999999999999999999887653
No 172
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.26 E-value=1.1e-10 Score=91.68 Aligned_cols=162 Identities=12% Similarity=0.002 Sum_probs=98.4
Q ss_pred hhhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccc-hHhHHHhhHHHHHHHHHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVIISLVLLSW 79 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~ 79 (204)
+.|..+..+....++++.++++ .|.+..+.+++.+....+ ..+++++.|.++||+|| |+.+..+..+..+......+
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~-~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIA-AILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3456666766776777777755 899999999998988888 89999999999999965 66777666666555555444
Q ss_pred HH--HHHHHHHHHHHHhcccccccch----hhcc----cccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 041627 80 AF--ISVIGLALYITFFAPGMGPVPW----TVNS----EVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGST 149 (204)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~----e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (204)
.. +.+...+.+.+.......+... .+.. |......|.+..| .+|..++|.+.+.+....+| .+
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~-~~ 161 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN-IQ 161 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh-HH
Confidence 32 3334444444444333322222 2222 2223233444444 35677777777766222223 35
Q ss_pred hhHHHHHHHHHHHHHHhhccCCC
Q 041627 150 FLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 150 ~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
+++.++..++..+ ..+.+||++
T Consensus 162 f~~~~~~~~~~~~-~~~~~~e~~ 183 (418)
T TIGR00889 162 LYITAGSSALLGV-FALTLPDIP 183 (418)
T ss_pred HHHHHHHHHHHHH-HHhcCCCCC
Confidence 6665555555543 345677764
No 173
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.26 E-value=1.1e-10 Score=93.19 Aligned_cols=138 Identities=12% Similarity=0.002 Sum_probs=102.8
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH--H
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA--F 81 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~ 81 (204)
.....++....+.|.+.++ .|.++.+.+........+ ..++.++.|++.||+|||+.+..+..+..++...+... .
T Consensus 266 ~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (485)
T TIGR00711 266 LLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLA-PMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP 344 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC
Confidence 3444556777888999876 789988877766665555 89999999999999999999888877777666655421 1
Q ss_pred ----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 82 ----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
........+.+.+.+...+.......|..|+++|+++.++.+....+|+.+++.+.+.+.+.
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344445544444444556667788999999999999999999999999999887764
No 174
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.24 E-value=4.2e-10 Score=87.54 Aligned_cols=138 Identities=13% Similarity=0.104 Sum_probs=83.9
Q ss_pred hhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 11 NTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
..+..+.|.+.+ ++|.++.+.+......... ..++.++.+++.||+|||+.+..+..+..++........ ......
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGV-SMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFG 298 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566654 5788888877666666555 789999999999999999998888777666665554433 211111
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHH
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILA 154 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (204)
..+...+.+... ......+..|.++|+ +.......++..+++.+.+.+.+..|+.......+
T Consensus 299 ~~l~~~g~~~~~--~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~ 360 (392)
T PRK10473 299 ITLICAGFSVGF--GVAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIG 360 (392)
T ss_pred HHHHHHHHHHHh--HHHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 111111111111 123334555655554 44445556777788888888888888654333333
No 175
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.24 E-value=2.5e-10 Score=85.75 Aligned_cols=152 Identities=20% Similarity=0.086 Sum_probs=116.8
Q ss_pred HHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhc
Q 041627 18 PTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFA 95 (204)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 95 (204)
|......|.+..+..++......+ ..+++..+|.++|++|||+.+.......++..++-...+ ..+..++.+.+.+.
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~g-mllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~ 180 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLG-MLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGV 180 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhh-hhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccC
Confidence 344444677777777777777777 799999999999999999998888777777766665555 56677777777777
Q ss_pred ccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 96 PGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 96 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
++ .|...++-.|..|..+|+.-+=+. ....+|.++...+....+..+|||+........ +.......+++||+++
T Consensus 181 gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~p-l~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTP-LMFAARFLVWVYESPR 255 (528)
T ss_pred CC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhH-HHHHHHHHhhcccCcc
Confidence 77 777778889999999998766665 777788888888888888899998877666644 4333455677899854
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.23 E-value=9.9e-11 Score=89.86 Aligned_cols=122 Identities=8% Similarity=-0.004 Sum_probs=90.8
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-----
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA----- 80 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----- 80 (204)
...+.+....+.|.+.++.|+++++.+............++.+++|++.||+|||+.+..+.++..+........
T Consensus 221 ~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 345556777888999888999998877777766655478999999999999999998887777666655443332
Q ss_pred ------H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHH
Q 041627 81 ------F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNW 127 (204)
Q Consensus 81 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 127 (204)
. +......++.+.+.+...+...++..|.+|+++||+.+|+.+...+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1 2233334444566666778888999999999999999998877543
No 177
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.22 E-value=5.7e-10 Score=87.16 Aligned_cols=131 Identities=13% Similarity=-0.004 Sum_probs=89.1
Q ss_pred HHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc-cccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHH
Q 041627 13 VMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLID-HFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLAL 89 (204)
Q Consensus 13 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (204)
...+.|.+.++.+.++.+.+......... ...+....+++.| |++.|+.+..+..+..++...+.... ........
T Consensus 227 ~~~~~p~~~~~~~~~~~~~g~l~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 305 (400)
T PRK11646 227 VMLMLPIMVNDIAGSPSAVKWMYAIEACL-SLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLIC 305 (400)
T ss_pred HHHhhhhhHHhhcCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34577888888766777767666555544 4444444455554 56666666666666665555444333 22222233
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
+.+.+.....+...+++.|..|+++|+++.|+.+....+|..++|.+.+.+.+..
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 3444444455667788999999999999999999999999999999999998875
No 178
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.22 E-value=1.1e-09 Score=84.62 Aligned_cols=132 Identities=18% Similarity=0.246 Sum_probs=91.2
Q ss_pred hhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----
Q 041627 7 FTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---- 81 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---- 81 (204)
....+....+.|.+.+ ++|.++.+.+......... ..++.++.|++.||+|||+.+..+..+..++...+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (385)
T TIGR00710 219 FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIA-MIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL 297 (385)
T ss_pred HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3345566677787776 5899988877777666555 799999999999999999988877666665554443321
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
........+.+.+.+...+....+..|..| ++|+++.++.+.....++.+.+.+.+..
T Consensus 298 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 298 GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112222334445455556666777788876 6789999999888777666666666533
No 179
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=4.3e-10 Score=89.70 Aligned_cols=136 Identities=13% Similarity=0.006 Sum_probs=88.6
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH----H---H
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA----F---I 82 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~---~ 82 (204)
.+....+.+.+.+....++...+......... .+++.++.++++||+|+|+.+..+..+.+++.+..... . +
T Consensus 247 ~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~-~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 247 SNIINGFAIYYFTYVIGDADLFPYYLSYAGAA-NLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHHhhheeeEEEEECCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 33444444444444333444444444433334 78899999999999999999887777655554443321 1 2
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccC-------CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYR-------EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
...+...+.+...+...+..+++++|..+ ++..|..++.......++..+++.+.+.+.+..|+
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 23333344455555666777888998855 34455678888888999999999999998887665
No 180
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=3e-10 Score=90.57 Aligned_cols=163 Identities=15% Similarity=0.121 Sum_probs=101.3
Q ss_pred hhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc----cccchHh-HHHhhHHHHHHHHHHHHHH
Q 041627 8 TGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLID----HFGRKKL-ALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~-~~~~~~~~~~~~~~~~~~~ 81 (204)
.....+..|++.|.++ .|++....+.+..+.-.. .++..++.|+++| |+||||. ++.+.....++...+...+
T Consensus 20 ~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~-dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p 98 (473)
T PRK10429 20 FAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIW-DAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH 98 (473)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC
Confidence 3445566777777766 699999988888777666 8999999999999 5698554 5556666555544443211
Q ss_pred --------HHHHHHHHHHHHhcccccccchhhccccc-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-------
Q 041627 82 --------ISVIGLALYITFFAPGMGPVPWTVNSEVY-REQYRGICGGMSATVNWISNLIVAQNFLTVADLVG------- 145 (204)
Q Consensus 82 --------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------- 145 (204)
....+...+...+.........++..|+. ++++|.+..+......++++.+.+.+...+.+..|
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g 178 (473)
T PRK10429 99 LFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFG 178 (473)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 12222233334444445556668889988 58999998988777777776666555443333322
Q ss_pred cchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 146 TGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
|+....+.+++..+..+.+.+..+|.
T Consensus 179 ~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 179 FQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceec
Confidence 33333344444444444444445654
No 181
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.21 E-value=5.1e-10 Score=83.76 Aligned_cols=159 Identities=19% Similarity=0.126 Sum_probs=120.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-cchHhHHHhhHHHHHHHHHHHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
+-.|...+|....|+|.+..|.|+|..+.+.+.+..... +.+.++....+++|. ++|+.......++.++.+.+.+.+
T Consensus 217 mGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~-~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLA-QLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHH-HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 345677889999999999999999999999999999888 899999999999964 567766666777777776666655
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGIAV 158 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (204)
.....-.++.+.+.++..+.....+.+-.+ +++-+.-.++.+..+.+-..++|.+.|++.|..| |...........+
T Consensus 296 ~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 296 GQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred hhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 222222467778888888888787776665 4445566778888888888999999999999987 5555554444444
Q ss_pred HHHH
Q 041627 159 LAVV 162 (204)
Q Consensus 159 i~~~ 162 (204)
+..+
T Consensus 376 ~m~i 379 (395)
T COG2807 376 LMLI 379 (395)
T ss_pred HHHH
Confidence 4433
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=7.3e-11 Score=85.70 Aligned_cols=136 Identities=15% Similarity=0.081 Sum_probs=96.3
Q ss_pred hhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHH-HHHHHHHHHHHH
Q 041627 9 GINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISL-VLLSWAFISVIG 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (204)
.++-+...-|.+.+ ++|+++...+...+....+ +++.+++.|.++||+||+...+.+..+..+.. ..+.+..+....
T Consensus 279 a~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~I-sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~ 357 (459)
T KOG4686|consen 279 AWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGI-SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYT 357 (459)
T ss_pred HHHHHhhhhHHHHHHhhCCChhhccchhhhhhhh-hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHH
Confidence 33344444555555 4899999988888888777 89999999999999999987766554444333 333333322222
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
...+.+..........|..++.+.|+++-|+++|..+...++|-.+.|.+.+.+.+.-|
T Consensus 358 ~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 358 SMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 33333333333333456777778899999999999999999999999999999888765
No 183
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.19 E-value=2.5e-09 Score=83.41 Aligned_cols=151 Identities=19% Similarity=0.188 Sum_probs=98.4
Q ss_pred hhhhhhHHhhh-HHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHH-HHHHHHHH--H
Q 041627 7 FTGINTVMYYS-PTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS-LVLLSWAF--I 82 (204)
Q Consensus 7 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~-~~~~~~~~--~ 82 (204)
+.+.+....+. |.+.++.|++..+.+........+ ..++.++.+++.||.+| +.+.....+..+. ........ +
T Consensus 229 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~-~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~~~~ 306 (394)
T PRK10213 229 FAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIA-SFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGSDKI 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHH-HHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34444545554 777788899988877777776666 79999999999999644 4433333332322 22222222 3
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
......++.+.+.....+....++.+..| +++++..+.......++..+++.+.+.+.+..|++..+...+.+..+.
T Consensus 307 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 307 VATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 33334445555555555666667777777 445667777777888999999999999999888776666655444333
No 184
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=4e-10 Score=88.77 Aligned_cols=132 Identities=20% Similarity=0.199 Sum_probs=106.9
Q ss_pred HHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHH
Q 041627 43 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMS 122 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 122 (204)
..+.++..|.++||+|||..+........+..+...+..++..+..- ..+......+...+++++....++|...+|+.
T Consensus 75 ~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~~~~-l~g~~~~~~s~~~a~vadis~~~~R~~~~gll 153 (463)
T KOG2816|consen 75 TLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFLLLG-LSGGFSAIFSVGFAYVADISSEEERSSSIGLL 153 (463)
T ss_pred HHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhhhcc-cccchhhhhhhhhhheeeccchhHHHHHHHHH
Confidence 68899999999999999999999888888777766666544333111 12222334466779999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCCcC
Q 041627 123 ATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQGLT 175 (204)
Q Consensus 123 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~ 175 (204)
......+..++|...+.+....+....+.+..+...+..+....++||+..++
T Consensus 154 ~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 154 SGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 99999999999999999999999888899888888888888888999986544
No 185
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=6e-10 Score=88.26 Aligned_cols=140 Identities=11% Similarity=-0.011 Sum_probs=94.7
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--- 81 (204)
.+.+........|.+.++ +|.++.. +.+.........+++.++.+++.||+|+|+.+..+..+..++.+.+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~ 318 (448)
T PRK09848 240 VLISTFAVSASSLFYVRYVLNDTGLF-TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWS 318 (448)
T ss_pred HHHHHHHHhhhheeeEeeecCChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchh
Confidence 344444555556666654 5554443 43333333333678899999999999999999988877776665554422
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCc-------chhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ-------YRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
+.......+.+.+.+...+...+..+|..|.+ ++|...|+.+....+|..+++.+.+.+.+..|+
T Consensus 319 ~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 319 LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22333344455555566667777888887643 468889999999999999999999988877665
No 186
>PRK11043 putative transporter; Provisional
Probab=99.18 E-value=1.5e-09 Score=84.70 Aligned_cols=133 Identities=12% Similarity=0.075 Sum_probs=88.9
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-----H--
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-----F-- 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----~-- 81 (204)
..+....+.|.+.++.|+++.+.+......... ..++.++.+++.||+|+|+..........++....... .
T Consensus 218 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~-~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (401)
T PRK11043 218 AFFAWLTGSPFILEQMGYSPADIGLSYVPQTIA-FLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSL 296 (401)
T ss_pred HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcH
Confidence 445566778889888999988877655444444 78899999999999999987655544443333322111 1
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
..........+...+...+.......|..| ++|+++.|+.+.....++..++.+.+.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 297 VPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 222222333444445555666566667666 5799999999998888888888888877653
No 187
>PRK11462 putative transporter; Provisional
Probab=99.17 E-value=2.1e-09 Score=85.42 Aligned_cols=161 Identities=13% Similarity=0.080 Sum_probs=102.9
Q ss_pred hhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHhHH-HhhHHHHHHHHHHHHHH--
Q 041627 10 INTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKLAL-SSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~~~-~~~~~~~~~~~~~~~~~-- 81 (204)
+..+..|+..+.++ .|+++...+....+.-.. .++..++.|.++|| +||||..+ .+.+...++.+.+...+
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~-Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~ 103 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARAL-DAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDL 103 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH-HHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCC
Confidence 34555666666555 799999878777766666 89999999999996 68877655 45455555554443222
Q ss_pred ------HHHHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-------cc
Q 041627 82 ------ISVIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-------TG 147 (204)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~ 147 (204)
....+...+...+.........++.+|+.+ +++|.+..++....+.+|+.+++.+...+....| |.
T Consensus 104 s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 104 SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 122222233334444444556678888876 7899999999999988888777776554444433 44
Q ss_pred hhhhHHHHHHHHHHHHHHhhccCC
Q 041627 148 STFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 148 ~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
....+.+++..++..+++...+|.
T Consensus 184 ~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcceec
Confidence 444455555445544444445554
No 188
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.17 E-value=2.7e-09 Score=80.22 Aligned_cols=159 Identities=17% Similarity=0.047 Sum_probs=109.5
Q ss_pred hhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 041627 15 YYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIGLALYITF 93 (204)
Q Consensus 15 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 93 (204)
+|.=.+.+++|+++.+++.+....... +.+...+.|.++||+|||+..+..+++..++++...... ..+++.+++.|.
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~S-s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFAS-SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 444445578999999988887777766 789999999999999999998888888888776544333 666777777777
Q ss_pred hcccccccchhh-ccc----ccCCcchhhhhhHHH-HHHHHHHHHHHHHHHHHHHhhCc--chhhhHHHHHHHHHHHHHH
Q 041627 94 FAPGMGPVPWTV-NSE----VYREQYRGICGGMSA-TVNWISNLIVAQNFLTVADLVGT--GSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 94 ~~~~~~~~~~~~-~~e----~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 165 (204)
......+..-++ +.| -+|++..+...+... ..+.+.++.++.+...+.+..+. ..+|.....+..++.++..
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 766666554333 233 345555555555555 33445566666666667776654 5677777777667766666
Q ss_pred hhccCCCCc
Q 041627 166 LFVPETQGL 174 (204)
Q Consensus 166 ~~~~e~~~~ 174 (204)
...+|+.+.
T Consensus 214 ~~W~ENyg~ 222 (354)
T PF05631_consen 214 KTWPENYGD 222 (354)
T ss_pred hcccccCCC
Confidence 666787544
No 189
>PRK10054 putative transporter; Provisional
Probab=99.16 E-value=6.6e-10 Score=86.66 Aligned_cols=144 Identities=14% Similarity=0.028 Sum_probs=95.9
Q ss_pred hhhHHHHHH---cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH--H-HHHHHHH
Q 041627 15 YYSPTIVQM---AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA--F-ISVIGLA 88 (204)
Q Consensus 15 ~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 88 (204)
.+.+.+... .+.+....+......... .....+..|++.||.++|+.+..+..+..+........ . +......
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (395)
T PRK10054 227 SCISQYVMVVADSDFAEKVVAVVLPVNAAM-VVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSA 305 (395)
T ss_pred hhHHHHHHHhcccchHHHHHHHHHHhhhhh-eeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 345555433 344444444444444333 45667888999999999998888877666665554432 1 2233344
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHH
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (204)
...+.+.....+....++.+..|++.|++..+..+ ...+|..++|.+.+.+.+..|....+++.+....+.
T Consensus 306 ~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 376 (395)
T PRK10054 306 AVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAA 376 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHH
Confidence 44455554545666778899999999999988654 566899999999999999998766666654444433
No 190
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=1.2e-09 Score=86.41 Aligned_cols=147 Identities=14% Similarity=0.082 Sum_probs=104.7
Q ss_pred hhhhhhHHhhhHHHH-H-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HH
Q 041627 7 FTGINTVMYYSPTIV-Q-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IS 83 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~ 83 (204)
..+.++...|.+.+. + ..|.++.+.+......... ..++.++.+++.||+|||+++..+..+..+......... ..
T Consensus 271 ~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~-~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK10133 271 VGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVC-FFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV 349 (438)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH
Confidence 344455556777774 4 4799999888877777776 899999999999999999988777666555444333322 22
Q ss_pred HHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhhHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG-TGSTFLILAGI 156 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 156 (204)
......+.+++.+...|.......|..|++ .+++.++... ...++.++|.+.+.+.+..| .+..|++....
T Consensus 350 ~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 350 GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 233455667778888888888888887754 5667777754 45678889999999888887 56666543333
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.16 E-value=8.4e-10 Score=96.66 Aligned_cols=148 Identities=11% Similarity=-0.068 Sum_probs=105.0
Q ss_pred hhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH------
Q 041627 8 TGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA------ 80 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------ 80 (204)
...+.+..++|.+.++ +|.+..+.+.+.+....+ .+++.++.|+++||.++++.+..+.++..++.+.+.+.
T Consensus 239 ~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g-~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (1140)
T PRK06814 239 LVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVG-VAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPA 317 (1140)
T ss_pred HHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHH-HHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccc
Confidence 3345666788988876 788888888877777777 79999999999998877766555444444433322221
Q ss_pred --------------H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh-
Q 041627 81 --------------F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL- 143 (204)
Q Consensus 81 --------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 143 (204)
. +.+.+..++.+.+.+...+...+++.+..|++.||+++|+.+....++..+++.+.+.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~ 397 (1140)
T PRK06814 318 EPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG 397 (1140)
T ss_pred ccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 33344455556666666667789999999999999999999999999999999998887643
Q ss_pred hCcchhhhHHHHH
Q 041627 144 VGTGSTFLILAGI 156 (204)
Q Consensus 144 ~~~~~~~~~~~~~ 156 (204)
.+....+++.+..
T Consensus 398 ~~~~~~~~~~~~~ 410 (1140)
T PRK06814 398 FSIPWIILFIALA 410 (1140)
T ss_pred cCHHHHHHHHHHH
Confidence 3444444443433
No 192
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.14 E-value=3.6e-09 Score=81.79 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=77.5
Q ss_pred hhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH---H-
Q 041627 7 FTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA---F- 81 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---~- 81 (204)
+.+.+.+..+.|.+.. +.|.++.+.+......... ..++.++.|++.||+|||+.+..+.....+........ .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
T PRK11102 207 FAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVF-LFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDL 285 (377)
T ss_pred HHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445555666676655 4799988878777766655 89999999999999999998887766544333222111 1
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHH-HHHHHHHHH
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNW-ISNLIVAQN 136 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~ 136 (204)
+.................+....+..|..| ++|+++.++.+.... ++..+++.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 286 GFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 111112222222222333344456677766 789999988776543 344444443
No 193
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.13 E-value=1.5e-09 Score=86.43 Aligned_cols=164 Identities=16% Similarity=0.039 Sum_probs=106.8
Q ss_pred hhhhhhhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc-----chHhHHHhhHHHH-HHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG-----RKKLALSSLAGVI-ISLVL 76 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----rr~~~~~~~~~~~-~~~~~ 76 (204)
+.+... +.....++.+++ ++|.++++.+.+.+..... ..+ .+++|.++||++ ||+.++++.++.. +....
T Consensus 36 ~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lp-w~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~ 112 (468)
T TIGR00788 36 FVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLG-WAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL 112 (468)
T ss_pred HHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHH-HHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence 444455 444444455555 5899999987777777666 454 555999999997 6666666655542 22222
Q ss_pred HHHHH---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhh---hhHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 041627 77 LSWAF---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGIC---GGMSATVNWISNLIVAQNFLTVADLVGTGSTF 150 (204)
Q Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 150 (204)
+.... .......++..++........-.+..|..+ +++... .+.......+|..+++.+.+.+.+..+|+..|
T Consensus 113 l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f 191 (468)
T TIGR00788 113 LPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILF 191 (468)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHH
Confidence 22111 122224455555566666778899999988 444433 33444444579999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhccCCC
Q 041627 151 LILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 151 ~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
++.+.+.++. .....+.+|.+
T Consensus 192 ~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 192 LITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHH-HHHHHhccccc
Confidence 8888777766 44456677764
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.11 E-value=1.1e-08 Score=79.75 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=100.3
Q ss_pred hhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHH
Q 041627 11 NTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGL 87 (204)
Q Consensus 11 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 87 (204)
.......|.+.++ +|.++.+.+........+ ..++++..+++.||.++|+.+..+... .+......... +.....
T Consensus 222 ~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g-~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK11195 222 ATLRFLVLAWAPVALGITLNQPAYLQAVVAIG-IAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPL 299 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH-HHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHH
Confidence 3344455555554 788888888877777666 799999999999999998877766433 33322222222 223333
Q ss_pred HHHHHHhcccccccchhhcccccCCcc-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQY-RGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
.++.+.+.+...+...+...|..|++. +|++.++.+...+++..++..+.+. .+..|-+..+.+.+...++...+.
T Consensus 300 ~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 300 LILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSL-LVKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHH
Confidence 444555555555556677778766654 7999999999999999998888874 467777666666554444444433
No 195
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=5.3e-10 Score=85.31 Aligned_cols=128 Identities=21% Similarity=0.290 Sum_probs=96.9
Q ss_pred hhhhhhhHHhhhHHH-HHHcCCC-chhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 6 QFTGINTVMYYSPTI-VQMAGFQ-SNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
.....+....+.|.+ .+++|.+ ..+.+...+..... ..++.++.|++.||+++|+..........+.........
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
T PF07690_consen 218 FFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIV-GIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS 296 (352)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH
T ss_pred HHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334566788889988 6678888 67766666766666 788899999999999998877766665555554443221
Q ss_pred ---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHH
Q 041627 82 ---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVA 134 (204)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 134 (204)
........+.+.+.+...+....+..|..|+++|+++.|+.+...++++.++|
T Consensus 297 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 297 SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33334455566666667788889999999999999999999999999998886
No 196
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.09 E-value=7.4e-09 Score=80.69 Aligned_cols=141 Identities=13% Similarity=0.079 Sum_probs=104.0
Q ss_pred hhhhhhHHhhhHHHHHHcC-CCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-H--H
Q 041627 7 FTGINTVMYYSPTIVQMAG-FQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-F--I 82 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~--~ 82 (204)
.........|.+.+.++.| .+....+...+..... .++.-...+++..|+|.|+++.++.+..++=...+... + +
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~a-Ei~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~ 298 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVA-EIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWP 298 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 3445567788888999988 5666656555554444 88999999999999999999999888877666555554 1 2
Q ss_pred HHHHHH----HHHHHhcccccccchhhcccccCCcchhhhhhHHHHH-HHHHHHHHHHHHHHHHHhhCcch
Q 041627 83 SVIGLA----LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATV-NWISNLIVAQNFLTVADLVGTGS 148 (204)
Q Consensus 83 ~~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 148 (204)
...... .+.+...+........++.+..|++.|+++.++.... ..+|+.++..+.|++.+.+|.+.
T Consensus 299 ~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 299 FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 222221 2344444455566779999999999999999988875 57899999999999999887543
No 197
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.09 E-value=2.6e-09 Score=83.16 Aligned_cols=132 Identities=19% Similarity=0.208 Sum_probs=92.8
Q ss_pred hhhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc-chHhHHHhhHHHHHHHHHHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG-RKKLALSSLAGVIISLVLLSWA 80 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~~~~ 80 (204)
.+|.++..+....++.|.++++.|++..+++.+.+..... .+++.+++|.++||.+ +|+.+.+..++..+........
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~-~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLA-RIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577888888999999999999999999999999988888 8999999999999986 4666655555554444333333
Q ss_pred H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHH
Q 041627 81 F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQN 136 (204)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 136 (204)
. +.+.....+...+.....|...++.-+... +++.-+|-....+.+|-.++...
T Consensus 89 ~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 89 SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 2 333333444444444455666666666554 34557787777777777766554
No 198
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=9.4e-09 Score=81.40 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHHHHHHHHHhcccccccchhhcccccC----
Q 041627 40 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIGLALYITFFAPGMGPVPWTVNSEVYR---- 111 (204)
Q Consensus 40 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p---- 111 (204)
....+++.+++++++||+|+|+.+..+.....+......... ........+.+.+.+...+..+++++|..+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 333678889999999999999998877665554333222221 333444455666666777888889988876
Q ss_pred ---CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 112 ---EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 112 ---~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
++..|...+.......+|..+++.+.+.+.+..|+
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 23345677888888899999999999998887765
No 199
>PRK11462 putative transporter; Provisional
Probab=99.02 E-value=3.2e-08 Score=78.77 Aligned_cols=114 Identities=13% Similarity=0.103 Sum_probs=68.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----HHHHHHHHHHHHhcccccccchhhcc
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----ISVIGLALYITFFAPGMGPVPWTVNS 107 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (204)
+......... .+++.+++++++||+|+|+.+..+..+..+......+.. .......++.+.+.+...+..+.+.+
T Consensus 266 ~~~l~~~~i~-~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 266 VAFLTTYCVG-NLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444344 788999999999999999887654443333222222211 12222223334444444455566777
Q ss_pred cccC-------CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 108 EVYR-------EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 108 e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
|..+ .+..|..++.......+|..+++.+.+.+.+..|+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7665 23334445666688889999999999888876554
No 200
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.01 E-value=3.6e-08 Score=77.74 Aligned_cols=142 Identities=16% Similarity=0.167 Sum_probs=107.4
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-- 81 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-- 81 (204)
+++..+........+.+.++.-.++...+......... ..++.++.++++||+|+|+.+..+..+.+++.+...+..
T Consensus 235 ~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~-~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~ 313 (428)
T PF13347_consen 235 FLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVA-SIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG 313 (428)
T ss_pred HHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHH-HHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhh
Confidence 34455555666667777776433334445555555444 899999999999999999999999988888777765543
Q ss_pred --HHHHHHHHHHHHhcccccccchhhcccccCC-------cchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 82 --ISVIGLALYITFFAPGMGPVPWTVNSEVYRE-------QYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
+...+...+.+.+.+......+++.+|..+. ++.|...|+......++..+++.+.+.+.+..|+
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 5566666777788888888889999998873 4468888899999999999999999988877664
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=9.7e-09 Score=80.52 Aligned_cols=140 Identities=11% Similarity=-0.004 Sum_probs=96.2
Q ss_pred hhhHHhhhHHHHHHcC--CCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHH
Q 041627 10 INTVMYYSPTIVQMAG--FQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIG 86 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~ 86 (204)
......+++.+.++.+ .+....+...+..... ..+|.++++++.||+++|+.+.+......+..+...... .....
T Consensus 248 e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~-~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~ 326 (410)
T TIGR00885 248 QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVI-FFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLY 326 (410)
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 3356677888887653 3333334344555444 789999999999999999988887777776666555543 23344
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh------CcchhhhH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV------GTGSTFLI 152 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~ 152 (204)
...+.+++....+|..+....+..+++.+..+.++... .+|+.+.|.+.|.+.|.. +.+..|++
T Consensus 327 ~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 327 CLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 55566677777778888999999887765434444443 389999999999999965 34455554
No 202
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=1.5e-09 Score=85.87 Aligned_cols=165 Identities=21% Similarity=0.257 Sum_probs=109.8
Q ss_pred hhhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccch--------Hh-HHHhhHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRK--------KL-ALSSLAGVI 71 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--------~~-~~~~~~~~~ 71 (204)
..++.+.+++.+..|+|.|+++ +|++..+.+++.++.... ..+..+++|.++||.-+| |. -.++....+
T Consensus 266 ~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~-~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~a 344 (466)
T KOG2532|consen 266 SAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLA-MAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPA 344 (466)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHH
Confidence 3577888999999999999997 899999978777777666 899999999999998663 11 122333333
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH---hhC
Q 041627 72 ISLVLLSWAF---ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD---LVG 145 (204)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~ 145 (204)
++.+.+.+.. ....+..+....+..+..............+++-+..+|+.+....+.++++|.+.+.+.. ...
T Consensus 345 i~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~e 424 (466)
T KOG2532|consen 345 VFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREE 424 (466)
T ss_pred HHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHH
Confidence 3333333332 2122222222222233332222222222146778999999999999999999999998883 236
Q ss_pred cchhhhHHHHHHHHHHHHHHhh
Q 041627 146 TGSTFLILAGIAVLAVVFVILF 167 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~~~~~ 167 (204)
|+..|++.+++.++..++..++
T Consensus 425 W~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 425 WRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHhchheeEe
Confidence 9999999888888776543333
No 203
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.1e-08 Score=76.88 Aligned_cols=140 Identities=19% Similarity=0.144 Sum_probs=98.6
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--- 81 (204)
.+.+.+.......+|.+. .|.++............. .+++.++...+.+|+|+|+++.++.++.+++.....+..
T Consensus 248 ~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~-~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~ 326 (467)
T COG2211 248 LFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAG-LLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGS 326 (467)
T ss_pred HHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 334444444444444433 344444433333444333 566799999999999999999999999999888877765
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccC-------CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYR-------EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (204)
...++..++.+.+.+...+..|++++|..+ .+.-|...+....+.-+|..++..+.++.....|+
T Consensus 327 ~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 327 VVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred hHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444466677777888899999998765 34446677788888889999999999988887664
No 204
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.98 E-value=3.4e-08 Score=74.21 Aligned_cols=152 Identities=16% Similarity=0.082 Sum_probs=122.5
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHHHH
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIGLA 88 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (204)
+.++.+.++.+.+++|.+.+..+.+.+..... ....+++..+++.|+|.++.+..+.++..++..+=.... ..++...
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~-fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt 106 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLA-FGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGT 106 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45677889999999999999988877777666 788999999999999999999998888888877654433 4455555
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CcchhhhHHHHHHHHHHHH
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV-GTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~ 163 (204)
.+.+.+....+...+..+-|.||++ -+..+|++.....+++.+++.+...+.++. +|+....+.+.+.++..+.
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 6666666666778889999999855 577999999999999999999888777776 6999888777777766543
No 205
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.95 E-value=8.9e-08 Score=78.80 Aligned_cols=156 Identities=15% Similarity=0.083 Sum_probs=113.6
Q ss_pred hhhhHHhhhHHHHH-HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHHHH-----
Q 041627 9 GINTVMYYSPTIVQ-MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAF----- 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~----- 81 (204)
++|++...+..|+. .+|++++............ .-+..+++|+++|+ +||++.+.++.++..++..++....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l-~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYL-CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 35666666666654 4788888877777777666 68899999999995 7999999988888877776665432
Q ss_pred -----HHHHHHHHHHHHhcccccccchhhcccccCCc---chhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-------Cc
Q 041627 82 -----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ---YRGICGGMSATVNWISNLIVAQNFLTVADLV-------GT 146 (204)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~ 146 (204)
...+....+..++.++.-+...+...|.++++ .|-..+.+.+...++|+++++.+.+++.+.. +|
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~ 160 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY 160 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch
Confidence 11333444555666666777778888888754 3667888999999999999999999887543 47
Q ss_pred chhhhHHHHHHHHHHHHHH
Q 041627 147 GSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 147 ~~~~~~~~~~~~i~~~~~~ 165 (204)
...|.+.++..+++.++..
T Consensus 161 ~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 161 PLAFGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777777766655433
No 206
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.94 E-value=1.5e-09 Score=83.90 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=94.2
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHH--HH-HHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVII--SL-VLLS 78 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~--~~-~~~~ 78 (204)
.|..+..+....++.|.++++ .|++.++.|.+.++.... ..+.+++.|.++||+|.||-++.......+ +. +...
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~-~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v 94 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLF-ALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYV 94 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-HHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHH-HHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667778888888876 899999999999998777 899999999999999976655443332222 11 1111
Q ss_pred HHH---HHHHHHHHHHHHhcccc-c---ccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhh
Q 041627 79 WAF---ISVIGLALYITFFAPGM-G---PVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFL 151 (204)
Q Consensus 79 ~~~---~~~~~~~~~~~~~~~~~-~---~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 151 (204)
+.+ .......++.+...+.. . ++.-++..+. .++.+.-+|-....+.+|..++..+.|.+.+..+ +..++
T Consensus 95 ~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p-~~~fw 171 (412)
T PF01306_consen 95 FGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAIASLLAGILFNINP-NIIFW 171 (412)
T ss_dssp HHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCc-cHHHH
Confidence 221 11112222222222221 1 2233333333 2445567888889999999999999998886433 45666
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 041627 152 ILAGIAVLAVVFVILFVP 169 (204)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~ 169 (204)
+.....++..++.....|
T Consensus 172 i~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 172 IASAAAIILLLLLLLLKP 189 (412)
T ss_dssp HHHHHHHHHHHHHHSS--
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 655444444333333333
No 207
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.93 E-value=6.1e-09 Score=80.52 Aligned_cols=156 Identities=15% Similarity=0.082 Sum_probs=113.4
Q ss_pred hhHHHHHHcCC----CchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHH
Q 041627 16 YSPTIVQMAGF----QSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLAL 89 (204)
Q Consensus 16 ~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (204)
..|.|.+.+.- ++...+.+.+.-... .++...+..++.+|+|.|+.++++..++.+=....++.+ +.+.....
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~-E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~kl 320 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFL-EALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKL 320 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHH
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHH-HHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 34555554433 334456666666555 889999999999999999999998888777666666555 55555555
Q ss_pred HHHHhcccccccchhhcccccCCcchhhhhhHH-HHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhc
Q 041627 90 YITFFAPGMGPVPWTVNSEVYREQYRGICGGMS-ATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
+-+.-.........-|+++.+|++..++.+.+. .....++..+.+...|.+.|..|.+..|++.+.+.+...++..+.+
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 555555455556678999999999999988885 4667888899999999999999998899888888777777777777
Q ss_pred cCCC
Q 041627 169 PETQ 172 (204)
Q Consensus 169 ~e~~ 172 (204)
++.+
T Consensus 401 ~~~~ 404 (412)
T PF01306_consen 401 KKDK 404 (412)
T ss_dssp --SS
T ss_pred cCCC
Confidence 6543
No 208
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.92 E-value=8.7e-09 Score=79.26 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=81.9
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH----
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA---- 80 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---- 80 (204)
.....+.+..+.|.+.++ +|.++.+.+......... ..++.++.|+++||+|||+.+..+......+.......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T TIGR00886 237 TFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLL-GSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP 315 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH-HHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc
Confidence 334456677888888865 688888877666666555 78999999999999999987776665554444433321
Q ss_pred -H-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHH
Q 041627 81 -F-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWIS 129 (204)
Q Consensus 81 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 129 (204)
. ..............+...+..+...+|..| ++||++.|+.+..+++|
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 316 LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 1 112222233333344445566778888887 68999999988876654
No 209
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.92 E-value=7.7e-08 Score=77.75 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=101.0
Q ss_pred HHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---H--HHHHHHHHHHHhcccccccchhhcccccCCcchh
Q 041627 42 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---I--SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRG 116 (204)
Q Consensus 42 ~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 116 (204)
...+.....+...|+.|||.....+..+..++.+...+.. . .......+...+........+.+.+|.+|+..|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 3677888889999999999999999998888888877665 2 2444444545555555556689999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCCcCHHHHH
Q 041627 117 ICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFVPETQGLTFLEVE 180 (204)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~ 180 (204)
.+.+.......++++++|.+...... ......+..++....+...+...++||++++...+..
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTL 504 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhH
Confidence 99999999999999999888754433 2222232233555555555666789999887665433
No 210
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.92 E-value=1.4e-08 Score=79.62 Aligned_cols=153 Identities=14% Similarity=0.065 Sum_probs=111.3
Q ss_pred HHHHH--cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccc-hHhHHHhhHHHHHHHHHHHHHH-------HHHHHHH
Q 041627 19 TIVQM--AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVIISLVLLSWAF-------ISVIGLA 88 (204)
Q Consensus 19 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 88 (204)
.|.++ .+-+.+..|+..+....+ .+++++..|+...|.++ |+.++.+.++++++.++..... +.++..|
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg-~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R 137 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLG-HAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVAR 137 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHH-HHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 45555 566777778888887777 89999999999999986 7778889999999888874332 4445555
Q ss_pred HHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--C-----------cchhhhHHHH
Q 041627 89 LYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV--G-----------TGSTFLILAG 155 (204)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~ 155 (204)
++.|+ +.+.....-.|+++..-.++|.++++.......+|.++||.+...+.... | +..+-|+..+
T Consensus 138 ~l~Gv-g~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i 216 (488)
T KOG2325|consen 138 ILTGV-GVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAI 216 (488)
T ss_pred HHcCc-CcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHH
Confidence 55444 33445667799999888899999999888877888888887765543221 1 2345677777
Q ss_pred HHHHHHHHHHhhccCCCC
Q 041627 156 IAVLAVVFVILFVPETQG 173 (204)
Q Consensus 156 ~~~i~~~~~~~~~~e~~~ 173 (204)
..++..++..++.+|...
T Consensus 217 ~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 217 LWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHHHhheeeccc
Confidence 777777777777777643
No 211
>PRK09848 glucuronide transporter; Provisional
Probab=98.91 E-value=6.5e-08 Score=76.72 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=70.1
Q ss_pred hhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc----cchHhH-HHhhHHHHHHHHHHHHHH-
Q 041627 9 GINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF----GRKKLA-LSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----grr~~~-~~~~~~~~~~~~~~~~~~- 81 (204)
+......|++.|+++ .|++..+.+......... .++..++.|+++||. |||+.+ ..+.+...+........+
T Consensus 23 ~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~-~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 101 (448)
T PRK09848 23 AFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVF-DAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPT 101 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcC
Confidence 334455666666665 699999988888888777 899999999999996 777755 444443333333321111
Q ss_pred --------HHHHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHH
Q 041627 82 --------ISVIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWI 128 (204)
Q Consensus 82 --------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~ 128 (204)
........+.+.+.+...+...++..|..+ +++|.+..+.......+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 102 DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 112222233333334444444555666654 46788776665544343
No 212
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.88 E-value=2.1e-07 Score=73.94 Aligned_cols=171 Identities=13% Similarity=0.082 Sum_probs=118.3
Q ss_pred hhhhhhhhhhHHhhhHHHHHH--cCCCch------hh---hhhHHHHHHHHHHHHHHHhhhhhccccc-hHhHHHhhHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM--AGFQSN------QL---ALLPSLVVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGV 70 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~--~g~~~~------~~---~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~ 70 (204)
.++.+.+++.+..|.+.+..+ ++.++. +. +.+..........+.+++..++.+|+|+ |+....+.++.
T Consensus 267 qffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~ 346 (477)
T TIGR01301 267 TCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIIL 346 (477)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 456777788888888877664 443321 11 3344444444456777788899999985 67667777776
Q ss_pred HHHHHHHHHHH-----------------------HHHHHHHHHHHHhcccccccchhhcccccCC--cchhhhhhHHHHH
Q 041627 71 IISLVLLSWAF-----------------------ISVIGLALYITFFAPGMGPVPWTVNSEVYRE--QYRGICGGMSATV 125 (204)
Q Consensus 71 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~r~~~~~~~~~~ 125 (204)
.++.....+.. ...+......|+.-....++.++++++..|+ +..|..+|+.|.+
T Consensus 347 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~ 426 (477)
T TIGR01301 347 AICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLA 426 (477)
T ss_pred HHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHH
Confidence 66666554322 2344455566666677778899999999985 4559999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhC--cchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 126 NWISNLIVAQNFLTVADLVG--TGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 126 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
..+.+++.....+.+.+..| ....+.+.++..+++.+...+.+|+++.
T Consensus 427 I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 427 IVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999998888777666666 3345666666677777888888887653
No 213
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.88 E-value=1e-08 Score=60.68 Aligned_cols=65 Identities=18% Similarity=0.330 Sum_probs=57.7
Q ss_pred hhhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhH
Q 041627 3 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLA 68 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 68 (204)
+|..+.+...+.+|.|.+.++.|++..+.+.+.++.... ..++.+++|.++||++|++..+....
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~-~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLI-RFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 566788888999999999999999999999988888888 89999999999999999988766544
No 214
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.85 E-value=1.9e-08 Score=80.13 Aligned_cols=122 Identities=8% Similarity=-0.079 Sum_probs=93.0
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH----------H--HHHHHHHHH
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA----------F--ISVIGLALY 90 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~ 90 (204)
..|+++.+.+......... .+++....+++.+|++.|+.+.++.++..++....... . ........+
T Consensus 282 ~lG~s~~~~G~~~~~~~v~-~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLG-SLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred cCCCCcchhhhHHHHHHHH-HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4788999988887777655 89999999999999999999988888777765432210 0 111222233
Q ss_pred HHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 91 ITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 91 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
.....+........++.+..|++.+|+.+++.....++|..+++.+.+.+.+..|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3334344445557899999999999999999999999999999999998888877
No 215
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.8e-08 Score=80.15 Aligned_cols=149 Identities=20% Similarity=0.098 Sum_probs=84.6
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHhHHHhhHHHHHHH-HH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKLALSSLAGVIISL-VL 76 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~~~~~~~~~~~~~-~~ 76 (204)
.++.....+++.+|+|.++++ .|++..+... +++...++++++.+++|+++|| ..+|........+..+.. ..
T Consensus 282 ~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~-ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~ 360 (495)
T KOG2533|consen 282 YFFLKLVNYGFSYWLPLYLKSNGGYSELQANL-LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAIS 360 (495)
T ss_pred HHHHhhccccHHHHHHHHHHcCCCcChHHhcc-ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455666678999999999998 5688877554 4555555589999999999999 556655555444433333 22
Q ss_pred HHHHH-HHHHHHHHHHH-HhcccccccchhhcccccCCcch-hhhhhHHHHHHHHHHHHHHHHHHH-HHHhhCcchhhhH
Q 041627 77 LSWAF-ISVIGLALYIT-FFAPGMGPVPWTVNSEVYREQYR-GICGGMSATVNWISNLIVAQNFLT-VADLVGTGSTFLI 152 (204)
Q Consensus 77 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~p~~~r-~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 152 (204)
+.... .......++.+ .......+......++....+.| .+..+........++.++|.+... ....++|...|..
T Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 361 LLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 22222 11111112222 22223334555666666655544 344445555555556665555432 2333566666643
No 216
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1e-07 Score=72.59 Aligned_cols=148 Identities=17% Similarity=0.173 Sum_probs=109.6
Q ss_pred hhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHH
Q 041627 8 TGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVI 85 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (204)
..--....|++.+..+ .|.++.+.+...+....+ ..+|.+++.++..|+...+.+....++..+.++...... ...+
T Consensus 250 G~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~-~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~ 328 (422)
T COG0738 250 GAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVG-FMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL 328 (422)
T ss_pred hHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 3345678899999998 777888867766766666 899999999999999999988877766665555555544 4445
Q ss_pred HHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHH
Q 041627 86 GLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAV 158 (204)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (204)
....+.+.+.+..+|..++...+..| ++- ...|.......+|+.+.|++.|++.|..|....+.....+|.
T Consensus 329 ~~l~~ig~F~simfPTIfslal~~l~-~~t-s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ 399 (422)
T COG0738 329 YALFLIGLFNSIMFPTIFSLALKNLG-EHT-SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCY 399 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccC-ccc-cccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 55667788888899999999999998 332 344555555668899999999999999987666553333333
No 217
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.81 E-value=5.5e-08 Score=74.41 Aligned_cols=129 Identities=13% Similarity=-0.019 Sum_probs=93.2
Q ss_pred HHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc-----chHhHHH-hhHHHHHHHHHHHHHH------------
Q 041627 20 IVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG-----RKKLALS-SLAGVIISLVLLSWAF------------ 81 (204)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----rr~~~~~-~~~~~~~~~~~~~~~~------------ 81 (204)
+..|++......+......... .+..+..|+.+|+.+ ||..+++ +......+..+..+..
T Consensus 6 MIvEL~vpA~lv~~lval~~~~--ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLV--APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHH--HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3456777777666666666555 678999999999998 7776655 4444444444433321
Q ss_pred ------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 041627 82 ------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTF 150 (204)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 150 (204)
......+.+.+.+.+...+...++++|..|+++|+++.++....-.+|.+++..+.+.+.+.+......
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 122334455566666667778899999999999999999999999999999999999988877643333
No 218
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.77 E-value=2.6e-07 Score=72.48 Aligned_cols=163 Identities=18% Similarity=0.154 Sum_probs=109.9
Q ss_pred hhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHhH-HHhhHHHHHHHHHHHHHH-
Q 041627 9 GINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKLA-LSSLAGVIISLVLLSWAF- 81 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~~-~~~~~~~~~~~~~~~~~~- 81 (204)
.......|+..+.++ .|++....+.+..+.=.. .++..++.|.++|| +||+|.. +.+.+..++...++...+
T Consensus 27 ~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~Rii-DAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~ 105 (467)
T COG2211 27 AFGIVVLYLLFFYTDVFGLSAALAGTIFLVARII-DAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD 105 (467)
T ss_pred HHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHH-HHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC
Confidence 345566777777666 899999888777777666 89999999999996 6776664 455566666655554433
Q ss_pred -------HHHHHHHHHHHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-------Cc
Q 041627 82 -------ISVIGLALYITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLV-------GT 146 (204)
Q Consensus 82 -------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~ 146 (204)
....+...+.+.+-....-...++.+|+.+ +++|.+..+.-..+..+|+.+...+.+.+.... ||
T Consensus 106 ~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~ 185 (467)
T COG2211 106 FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGY 185 (467)
T ss_pred cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhH
Confidence 222333334444444445555577778764 788999999999999999888888877776654 34
Q ss_pred chhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 147 GSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 147 ~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
+....+.+++..+..+.+++-.+|+.
T Consensus 186 ~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 186 QGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 44455555555556556666666653
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.73 E-value=5.9e-07 Score=70.01 Aligned_cols=132 Identities=15% Similarity=0.099 Sum_probs=81.3
Q ss_pred hhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHH-HHH---H-H
Q 041627 9 GINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL-SWA---F-I 82 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~-~~~---~-~ 82 (204)
+...+..+.+.+.++ +|.++.+.+........+ ..++.++.+++.||.+++................. ... . +
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPA-AFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVW 300 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 334444556666666 788888766665554444 67788888888888874332221211111111111 111 0 2
Q ss_pred HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
.......+.+.+.+...+....+..|..| ++++++.++.+....+|+.+++.+.+.+..
T Consensus 301 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 301 TLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 23333444455555566777778888887 578999999999989999999988876544
No 220
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.68 E-value=1.1e-06 Score=59.29 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=100.4
Q ss_pred hhhhhhhhhhhHHhhhHHHHHHcCCCc-----hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH
Q 041627 2 QAFQQFTGINTVMYYSPTIVQMAGFQS-----NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL 76 (204)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 76 (204)
.+++.++++........++.++.+.++ +..+............+.+++.+.+.+++|.|+.+.++.+...+-...
T Consensus 4 ~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~ 83 (156)
T PF05978_consen 4 GFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS 83 (156)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 466778888888777777776654431 222554444445547889999999999999999999988877765544
Q ss_pred HHHHH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 77 LSWAF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 77 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
..... +.+.....+.|.+.+..+...-.++.+...++.|++..++.......+.++|+...-
T Consensus 84 ~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 84 FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 43332 556666677788888888777789999999999999999888887777666665543
No 221
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.67 E-value=8.8e-07 Score=70.63 Aligned_cols=136 Identities=17% Similarity=0.111 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhhhhhccccchHhHHHhh-HHHHHHHHHHHHHH---H-HHHHHHHHHHHhcccccccchhhcccccCC
Q 041627 38 VVAGTNAVGTIVGIYLIDHFGRKKLALSSL-AGVIISLVLLSWAF---I-SVIGLALYITFFAPGMGPVPWTVNSEVYRE 112 (204)
Q Consensus 38 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 112 (204)
......++..++.|.++|+-|+||.++... .+..++...+.+.. + ...++..+...+.........+++.|+.++
T Consensus 78 is~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~ 157 (477)
T PF11700_consen 78 ISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARP 157 (477)
T ss_pred HHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCC
Confidence 334447889999999999998877766544 44444555444433 2 222233333334444456677899999998
Q ss_pred cch--------------------------hhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------CcchhhhHHHHHHH
Q 041627 113 QYR--------------------------GICGGMSATVNWISNLIVAQNFLTVADLV--------GTGSTFLILAGIAV 158 (204)
Q Consensus 113 ~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 158 (204)
+.+ ++..+.....+.+|+.+.-.+.-.+.... +.|..+.+.++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~ 237 (477)
T PF11700_consen 158 EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWL 237 (477)
T ss_pred ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHH
Confidence 888 89999999999999887666554333222 23556666677766
Q ss_pred HHHHHHHhhccCCCC
Q 041627 159 LAVVFVILFVPETQG 173 (204)
Q Consensus 159 i~~~~~~~~~~e~~~ 173 (204)
+..+..++++||.++
T Consensus 238 vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 238 VFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHhCCCCCC
Confidence 776777777888754
No 222
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.65 E-value=7.7e-07 Score=70.31 Aligned_cols=154 Identities=19% Similarity=0.140 Sum_probs=103.3
Q ss_pred hhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccc-----cchHhHHHhhHHHHHHHHHHHHHH------HH
Q 041627 15 YYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHF-----GRKKLALSSLAGVIISLVLLSWAF------IS 83 (204)
Q Consensus 15 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~------~~ 83 (204)
...|.+.+++|.++.+.+.+.+....- -...++.|.++|-+ .||+-++++.++..++...+...+ ..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lP--w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLP--WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCc--hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 344556677999999876655554333 45789999999986 355555666666654444444322 22
Q ss_pred HHHHHHHHHHhcccccccchhhcccccC--CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHH
Q 041627 84 VIGLALYITFFAPGMGPVPWTVNSEVYR--EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAV 161 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (204)
.....++...+........-+...|... ++.|+...+.......+|++++..+.|.+.+..+++..|.+.+.+..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 2223333334444444566677777763 23378888888888899999999999999999998888888887877776
Q ss_pred HHHHhhccC
Q 041627 162 VFVILFVPE 170 (204)
Q Consensus 162 ~~~~~~~~e 170 (204)
+...+..+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 666666666
No 223
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.60 E-value=2.4e-06 Score=69.39 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=84.5
Q ss_pred hhhhhhHHhhhHHHHHH-cCCCch---hhhhhHHHHHHHHHHHHHHHhhhhhccccchHh-HHHhhHHHHHHHHHHHHHH
Q 041627 7 FTGINTVMYYSPTIVQM-AGFQSN---QLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKL-ALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~-~~~~~~~~~~~~~~~~~~~ 81 (204)
.+-++....+.|+.... ++-+.. ..++.......+ ...++++.|.+..+++|-|. ++.+...+.+++-.+....
T Consensus 323 G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg-~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~ 401 (599)
T PF06609_consen 323 GMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFG-SCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR 401 (599)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHH-HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc
Confidence 33456666666766554 444332 223333444444 67888999999998887554 4455555554434443332
Q ss_pred ----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 82 ----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
........+.+.+.+...........-..|+++-+++.++......+|+.++..++..+
T Consensus 402 ~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 402 PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 23344455556655555556666667778999999999999999999998888776543
No 224
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.59 E-value=7.6e-06 Score=64.37 Aligned_cols=153 Identities=13% Similarity=0.031 Sum_probs=82.0
Q ss_pred hhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH----
Q 041627 5 QQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW---- 79 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---- 79 (204)
......+.+..+.|.+.++ .|.++.+.++.......+ ..++..+.+.+.+|..+++.......+..++......
T Consensus 229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~ 307 (413)
T PRK15403 229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGA-VIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL 307 (413)
T ss_pred HHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556667778988876 588888877665444444 6777777777654444433322222222222222111
Q ss_pred HH--H-HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHH
Q 041627 80 AF--I-SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGI 156 (204)
Q Consensus 80 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (204)
.. + .......+.+.+.+...+...... ..-....+|++.++.+.....+...++...+++.+. +-..++.....+
T Consensus 308 ~~~~~~~~~~~~~l~~~G~~~~~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 308 WPHVWLWSVLGTSLYAFGIGLIFPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 11 1 122233333333333334433212 111233478899999988888888888888876555 445566555544
Q ss_pred HHHH
Q 041627 157 AVLA 160 (204)
Q Consensus 157 ~~i~ 160 (204)
..+.
T Consensus 386 ~~~~ 389 (413)
T PRK15403 386 AGVI 389 (413)
T ss_pred HHHH
Confidence 4433
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.53 E-value=1.7e-07 Score=73.81 Aligned_cols=153 Identities=13% Similarity=0.085 Sum_probs=118.0
Q ss_pred hhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHH
Q 041627 9 GINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIG 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~ 86 (204)
+...+.+++=..+++.+..+...+ ..++....+.++.-++.+++.+|+|+-+++..++....+=...+.... |..+.
T Consensus 386 g~~lv~tFLfWHled~~~~~~LfG-v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP 464 (618)
T KOG3762|consen 386 GVGLVFTFLFWHLEDLGGIKTLFG-VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP 464 (618)
T ss_pred HHHHHHHHHHHHHhhcCCcceeee-ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee
Confidence 334455566556778876666555 556666666888999999999999999999888877776655555554 66666
Q ss_pred HHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHH-HHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHH
Q 041627 87 LALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVN-WISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (204)
+-++.+......+....+|++...|++.|+++.++..... .+|--+|..++|.+...++-+..|..+++.+++.++
T Consensus 465 ieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 7788888888888888899999999999999999877654 566778888888888888888888887777665544
No 226
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.47 E-value=2e-06 Score=66.67 Aligned_cols=119 Identities=12% Similarity=-0.025 Sum_probs=83.0
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--------H--HHHHHHHHHHH
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--------I--SVIGLALYITF 93 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~ 93 (204)
+| +... ..+.++.....+++..+.+-|+.||+|-|...+++....+++..+-..+. + .....-.+.+.
T Consensus 75 Yg-s~~~-~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 75 YG-SSSA-ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred hc-chHH-HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH
Confidence 45 4433 44555555555899999999999999999999999999988887754443 1 11112222222
Q ss_pred hcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 94 FAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 94 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
..-.......-...-+||+++|+.+..+..+.+.+|..++-.+.+.+..+.
T Consensus 153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 233333444456677899999999999999998899888888777766544
No 227
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.46 E-value=1.3e-05 Score=59.41 Aligned_cols=141 Identities=22% Similarity=0.251 Sum_probs=92.8
Q ss_pred hhHHhhhHHHHHHcCCCc--hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH----HHHH
Q 041627 11 NTVMYYSPTIVQMAGFQS--NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA----FISV 84 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~~~~ 84 (204)
.......+.+..+.+.+. ...+...+..... ..++.++.|.++||+|||+.+..+......+....... ....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLG-YAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALL 97 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHH-HHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 344556677777776665 3456666666666 67788999999999999987777665433332222221 1344
Q ss_pred HHHHHHHHHhcccccccchhhcccccCC-cchhhhhhHHHH-HHHHHHHHHHHHHHHHHHh--hCcchhhhH
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYRE-QYRGICGGMSAT-VNWISNLIVAQNFLTVADL--VGTGSTFLI 152 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~~ 152 (204)
...+...+...+...+....+..|..|+ ++|+...+.... ...++..+++.+.+.+... .+|+..+..
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 4445545666666677888999999988 678888888877 4666777777665555443 457664443
No 228
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.45 E-value=8.6e-06 Score=65.26 Aligned_cols=105 Identities=14% Similarity=0.038 Sum_probs=78.7
Q ss_pred HHhhHHHHHHHHHHHH-----------HHHHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHH
Q 041627 64 LSSLAGVIISLVLLSW-----------AFISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLI 132 (204)
Q Consensus 64 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 132 (204)
.++.++..++...... ..++++....+.+.+.....|....+..|..|++.||+.+|+......+|..+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666555543 11566777778888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHHhhc
Q 041627 133 VAQNFLTVADLVGTGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
++.+.....+..+|...+...+...++..++.++..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 433 GGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 888887666666776666666666665555444433
No 229
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.34 E-value=3.8e-06 Score=67.47 Aligned_cols=98 Identities=10% Similarity=0.008 Sum_probs=73.5
Q ss_pred HHHHHHHhhhhhccccchHh-------HHHhhHHHHHHHHHHH-----HH-------HHHHHHHHHHHHHhcccccccch
Q 041627 43 NAVGTIVGIYLIDHFGRKKL-------ALSSLAGVIISLVLLS-----WA-------FISVIGLALYITFFAPGMGPVPW 103 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~-------~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~ 103 (204)
.++..++.+++.||++||+. +.++.++..++.+.+. .. .+++....++.+.+.....+...
T Consensus 322 iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~ 401 (489)
T PRK10207 322 VVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGL 401 (489)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHH
Confidence 45777888999999999863 5566666555543221 11 14455566777788888888888
Q ss_pred hhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 104 TVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 104 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
.++.+..|++.++.++|+......+|+.++..+....
T Consensus 402 ~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 402 AMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998889988888777543
No 230
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.31 E-value=7.9e-06 Score=63.42 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=83.7
Q ss_pred HHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchH-hHHHhhHHHHHHHHHHHHHH------HHHHHHHHHHHH
Q 041627 21 VQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAF------ISVIGLALYITF 93 (204)
Q Consensus 21 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 93 (204)
+...|++....|......... +++++.+.|.+.||.+.-+ ++++......++........ +.+.......+.
T Consensus 293 l~~sgY~~~~aG~ig~l~iv~-Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 293 LCPSGYEGVFAGYIGALMIVA-GMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred cccccCCccccchhHHHHHHH-HHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 334567765545554444444 8999999999999987544 33333333333322222111 445566677788
Q ss_pred hcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 94 FAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 94 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
+..+..|+..-+..|..-|..-++..|+.+..+.+-+++-...-+...+..+
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 8888999999999998655556678999999888888877777777776665
No 231
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.30 E-value=5.9e-06 Score=66.61 Aligned_cols=94 Identities=7% Similarity=-0.108 Sum_probs=70.5
Q ss_pred HHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-----------HHHHHHHHHHHHhcccccccchhhcccccCCc
Q 041627 45 VGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ 113 (204)
Q Consensus 45 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 113 (204)
+.....+++.||.+.++.+.++.++..++...+.... ++......+.+.+.....|....++.+..|++
T Consensus 335 ~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~ 414 (500)
T PRK09584 335 ILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR 414 (500)
T ss_pred HHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH
Confidence 3344456677777766777888888887776654432 35666677788888888899999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 114 YRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 114 ~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
.||+.+|.......+++.+++.+..
T Consensus 415 ~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 415 LMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887766677776666654
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=98.20 E-value=3.5e-05 Score=62.91 Aligned_cols=162 Identities=13% Similarity=0.091 Sum_probs=102.4
Q ss_pred hhhhhHHhhhHHHHHHc-CCCc-hhhhh-hHHHHHHHHHHHHHHHhhhhhccccchH--------h-HHHhhHHHHHHHH
Q 041627 8 TGINTVMYYSPTIVQMA-GFQS-NQLAL-LPSLVVAGTNAVGTIVGIYLIDHFGRKK--------L-ALSSLAGVIISLV 75 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~-g~~~-~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~grr~--------~-~~~~~~~~~~~~~ 75 (204)
..-..+..-+-++.+.+ |.+. ++... +.+..... +.+|.+..|+++....||+ . +.+..+ +.++.+
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~-~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~l 444 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVG-SAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITML 444 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHH-HHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHH
Confidence 33345555667778888 6623 32122 44444444 8999999998873322222 2 222222 333333
Q ss_pred HHHHHH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHH-HHHHHHHHHhh--------
Q 041627 76 LLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIV-AQNFLTVADLV-------- 144 (204)
Q Consensus 76 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-------- 144 (204)
++.... ..+.+..++.+++.+..+++.....+|+|. ++-|+-+.+......+|+.+- ..++|.+.|.-
T Consensus 445 ll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~ 523 (591)
T PTZ00207 445 TLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDV 523 (591)
T ss_pred HHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCe
Confidence 333322 456677788888888899999999999999 888877777777777777654 55666666532
Q ss_pred -----CcchhhhHHHHHHHHHHHHHHhhccCCC
Q 041627 145 -----GTGSTFLILAGIAVLAVVFVILFVPETQ 172 (204)
Q Consensus 145 -----~~~~~~~~~~~~~~i~~~~~~~~~~e~~ 172 (204)
.++.+|++.++++.++.+......-+++
T Consensus 524 C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 524 CTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred eCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 2567888888888888776555444553
No 233
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.08 E-value=4.8e-07 Score=73.13 Aligned_cols=164 Identities=17% Similarity=0.062 Sum_probs=1.6
Q ss_pred hhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----
Q 041627 6 QFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---- 81 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---- 81 (204)
|.+....+..-++++-++++++..+.+.+.+..-.. ..+..++..++.+|-.|-+.+-.+.++++++.++++.-.
T Consensus 15 q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~-~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~ 93 (539)
T PF03137_consen 15 QMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIG-SLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcC
Confidence 333333444555677778999999989888888777 789999999999997776667777777777766653211
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhcccccccchhhcccccCCc
Q 041627 82 ------------------------------------------------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ 113 (204)
Q Consensus 82 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 113 (204)
..+++.-++.|++....++...+|+=|..+++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 11222234445555566788889999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHh---------------------hC-cchhhhHHHHHHHHHHHHHHhhccCC
Q 041627 114 YRGICGGMSATVNWISNLIVAQNFLTVADL---------------------VG-TGSTFLILAGIAVLAVVFVILFVPET 171 (204)
Q Consensus 114 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~~~~~i~~~~~~~~~~e~ 171 (204)
+-+...|+......+|-.+|-.+++...+. .| ||..|++.+.+.++..+.. +..|+.
T Consensus 174 ~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl-~~FPk~ 252 (539)
T PF03137_consen 174 NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL-FFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HcCCcc
Confidence 998889988888777777665555544321 13 6666666666665554433 334443
No 234
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.04 E-value=0.00024 Score=56.63 Aligned_cols=114 Identities=7% Similarity=0.081 Sum_probs=78.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH---------------------------
Q 041627 29 NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--------------------------- 81 (204)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--------------------------- 81 (204)
+...++-+.......++..++.+++++|++|++.+-...........++.+..
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 44555555554443445588899999999999987765555544444333220
Q ss_pred ------HHHHHHHHHHHHhcccccc-cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 82 ------ISVIGLALYITFFAPGMGP-VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
|............+....+ ..|.+++|++..++-.+-+++...++++|.++++.+..++.+
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233333444444555 778999999999999999999999999999999998877663
No 235
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.97 E-value=0.00012 Score=43.90 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=60.9
Q ss_pred hhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH
Q 041627 8 TGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 81 (204)
Q Consensus 8 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 81 (204)
.+=+.+++.+|.+.++.++|.++.+++.+.-..+ ..+|++...++.++.++++.+..+.+...+..+.+....
T Consensus 6 igRFayTplLP~M~~~~~ls~~~ag~lasaNy~G-YL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADGGLSLSQAGWLASANYLG-YLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457889999999999999999977776666666 999999999999998888888888888888877776654
No 236
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.96 E-value=6.8e-05 Score=58.60 Aligned_cols=135 Identities=14% Similarity=0.113 Sum_probs=76.1
Q ss_pred hHHhhhHHHHHH----cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccch----HhHHHhhHHHHHH-------HHH
Q 041627 12 TVMYYSPTIVQM----AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRK----KLALSSLAGVIIS-------LVL 76 (204)
Q Consensus 12 ~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr----~~~~~~~~~~~~~-------~~~ 76 (204)
++..|.|.+... .|.+..+ +++.......++.+|.+++|.++||+-|+ ....+.......+ ..+
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~-~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~ 340 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNA-TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL 340 (493)
T ss_pred ccchhhhhHHHHHHHHhCCcccc-chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH
Confidence 445555655443 3545444 66666666666899999999999994321 1111111111111 111
Q ss_pred HHHHH---HHHHHHHHHHHHh-cccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHH-HHHHHHHhh-Ccc
Q 041627 77 LSWAF---ISVIGLALYITFF-APGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQ-NFLTVADLV-GTG 147 (204)
Q Consensus 77 ~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~ 147 (204)
..... .......++.+.. .....+....+..|+.|+++|.+++++......+.+-.+++ +.|.+.+.. +|+
T Consensus 341 ~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 341 FPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 11111 1122222222222 22334555677889999999999999998887776655444 888887764 444
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.93 E-value=2e-05 Score=59.60 Aligned_cols=90 Identities=11% Similarity=0.043 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh----------------hC
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL----------------VG 145 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~ 145 (204)
...++..++.+.+.+...+....+++++.|++++++..++...++.+|..++|.+.+.+... ..
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAK 90 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHH
Confidence 34555566667777777888999999999999999999999999999999999999977632 35
Q ss_pred cchhhhHHHHHHHHHHHH-HHhhccCC
Q 041627 146 TGSTFLILAGIAVLAVVF-VILFVPET 171 (204)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~-~~~~~~e~ 171 (204)
|+.+++..+.+..+..+. .....||.
T Consensus 91 ~~~~yl~ia~~~~~~~i~~~~~~~p~~ 117 (310)
T TIGR01272 91 VHTPYLLLAGALAVLAIIFAFLPLPEL 117 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 777887666554444333 23334554
No 238
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.86 E-value=0.00089 Score=52.22 Aligned_cols=156 Identities=12% Similarity=0.080 Sum_probs=92.2
Q ss_pred hhhHHHHHH--cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHH
Q 041627 15 YYSPTIVQM--AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALY 90 (204)
Q Consensus 15 ~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 90 (204)
+|+..|+.+ .|+++++...-+.-...=......++...+.|.+|-|++++...+...+...++.+.. ..+-+.-++
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 344445543 6888877554333222222567788889999999999999888777666666555544 333333334
Q ss_pred HHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--cchhhhHHHHHHHHHHHHHHhhc
Q 041627 91 ITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG--TGSTFLILAGIAVLAVVFVILFV 168 (204)
Q Consensus 91 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 168 (204)
.|..... -...++|+--..|+++=-++.+.......+|.+++..++..+...-+ +....++......++. +..+++
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fL 181 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFL 181 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHc
Confidence 3333322 33445666666677776778888888887887877777765554333 2223333333333333 334456
Q ss_pred cCCC
Q 041627 169 PETQ 172 (204)
Q Consensus 169 ~e~~ 172 (204)
|..+
T Consensus 182 P~~~ 185 (412)
T PF01770_consen 182 PMPK 185 (412)
T ss_pred CCCC
Confidence 6543
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.81 E-value=2.8e-05 Score=61.80 Aligned_cols=66 Identities=8% Similarity=0.052 Sum_probs=56.2
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGV 70 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 70 (204)
+....+...+.+.++.+.+++|+++.+.+.+..+...+ .+++.+++|+++||+.+||.++++..+.
T Consensus 21 ~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v-~~L~~P~~g~~Adr~r~~r~lllgsl~~ 86 (618)
T KOG3762|consen 21 LFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLV-EFLAAPLWGFLADRYRKRRPLLLGSLLL 86 (618)
T ss_pred eeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHH-HHHhHHHHHHHHHHHHhcCchhHHHHHH
Confidence 34456677889999999999999999999999999999 8999999999999998877766654433
No 240
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.78 E-value=0.0046 Score=48.02 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=87.7
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc-cccchHhHHHhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHhccc
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLID-HFGRKKLALSSLAGVIISLVLLSWAF-----ISVIGLALYITFFAPG 97 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 97 (204)
+|++..+...+......+ ..+|....|++.. |.++|+.-.+++....++...+..+. +.+....++.+++.+.
T Consensus 239 fgmsv~eTT~Lta~~~~G-~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGG-TLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred cCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 788988855555555444 7888888888877 67888877778877777766655443 3444445555666665
Q ss_pred ccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 98 MGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 98 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
+....-+..-+..++++.|..+|.....+.+...++..+.+.+.|.
T Consensus 318 f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555667788888899999999999999988888888888877764
No 241
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.67 E-value=4.3e-05 Score=59.53 Aligned_cols=128 Identities=10% Similarity=0.008 Sum_probs=89.8
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc----ccchHhHHHh-hHHHHHHHHHHHHHH---
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH----FGRKKLALSS-LAGVIISLVLLSWAF--- 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~~~~~-~~~~~~~~~~~~~~~--- 81 (204)
+-.-..|.|.|.++.|.+....+......... +.+-+++.|..+|| +||||.++.. .....++.+++.+..
T Consensus 48 wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~-G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 48 WALELSYLTPYLQSLGVPHKWSSIIWLCGPLS-GLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred HHHHhccccHHHHHcCCCcccccccccccccc-cceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhh
Confidence 34456788889999999988877776666666 68899999999996 7888876654 444555555554432
Q ss_pred ----------------HHHHHHHHHHHHhcccccccchhhcccccCCcchhh-hhhHHHHHHHHHHHHHHHHHH
Q 041627 82 ----------------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGI-CGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 82 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~~~~g~~~~~~~~~ 138 (204)
...++..-+.-.........+-+++.|+..++++.+ +.++...+..+|+.++-.+.+
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 112222233344555677788899999998777777 888888887788777555444
No 242
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.66 E-value=0.00053 Score=56.95 Aligned_cols=157 Identities=16% Similarity=0.072 Sum_probs=110.8
Q ss_pred hhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-------------
Q 041627 15 YYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF------------- 81 (204)
Q Consensus 15 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------- 81 (204)
.-..++=+.+++++++.+.+.+..-.+ ..+...+..+...|..|-+.+-++.++++++.++..+-.
T Consensus 118 s~IttiErRF~i~Ss~sG~I~s~~dig-~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 118 SVITTIERRFKISSSQSGLIASSYDIG-NLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhcCCCCCcceeEeeecccc-hhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 334444456899998878877777777 788899999999998888888888888888877765421
Q ss_pred ----------------------------------------H-HHHHHHHHHHHhcccccccchhhcccccCCcchhhhhh
Q 041627 82 ----------------------------------------I-SVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGG 120 (204)
Q Consensus 82 ----------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 120 (204)
+ .+++.-++.|++....++...+|+=|...+++-....|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 12222344455566667888899999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh------------------hC-cchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 121 MSATVNWISNLIVAQNFLTVADL------------------VG-TGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
+......+|-++|-.+++.+... .| ||..|++.+.+.++..+. +++.|++..
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p-~f~fPk~lp 347 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP-LFFFPKELP 347 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH-HHhCcccCc
Confidence 98888888877776666665432 12 566677777777666554 445566543
No 243
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.57 E-value=1.8e-05 Score=58.23 Aligned_cols=121 Identities=13% Similarity=0.121 Sum_probs=85.2
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHHH-----HHHHHHHHHHHHHhcc
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWA-----FISVIGLALYITFFAP 96 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 96 (204)
+.+.+.++..++.+.+.+- ..+-++++|++.|| +|-|...++-+....++-++.+.- .+.+...+++.++++-
T Consensus 73 d~ni~~akftLlYsvYSwP-NvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 73 DSNIEYAKFTLLYSVYSWP-NVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred ccccceeeeeeeeeeccCC-CEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 3455555666677777777 88899999999996 566654444343334444333221 1667777777777776
Q ss_pred cccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 97 GMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 97 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
.....-..|..-++..++-+.++|+.....++|+.+--.+.+++.+..
T Consensus 152 SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 152 SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 666777889999999999999999999999999876555555555443
No 244
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.51 E-value=0.00017 Score=55.53 Aligned_cols=130 Identities=14% Similarity=0.032 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhhhhhccccchH--hHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhccccccc---chhhccc
Q 041627 36 SLVVAGTNAVGTIVGIYLIDHFGRKK--LALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPV---PWTVNSE 108 (204)
Q Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~grr~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~e 108 (204)
-....+...+++.+.|.++||++.-+ ....+.++...++....+.. ..+++..+..+.......+. ...++.|
T Consensus 312 fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd 391 (464)
T KOG3764|consen 312 FLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVD 391 (464)
T ss_pred ecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcc
Confidence 33444458899999999999999433 33333444443333344433 23333333333332222222 2233333
Q ss_pred ccCCc---chhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHHH
Q 041627 109 VYREQ---YRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 109 ~~p~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 165 (204)
.-..+ .-|..+++......++..++|.+.+.+.+..|++|...+.++..++..-++.
T Consensus 392 ~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 392 PRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred hhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 33333 4578888999999999999999999999999998888888887777655443
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.50 E-value=0.0039 Score=49.84 Aligned_cols=121 Identities=17% Similarity=0.183 Sum_probs=95.5
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhh-hhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccc
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIGLALYITFFAPGMGP 100 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 100 (204)
.+++++.+.+.+.+..... +.++.++.. .+...+|-|+....++..-.+.....++.. .+.+..............+
T Consensus 271 ~f~w~~~~~s~~~~~~~~~-~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~p 349 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSIL-GIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFP 349 (463)
T ss_pred ecCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhH
Confidence 3688999888887777777 677777776 777888989888888888888777777766 3444444555556666777
Q ss_pred cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 101 VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 101 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
...+..+...++++||++.++......+.+.++|.+.+.+...+
T Consensus 350 a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 350 AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 77889999999999999999999999999999999988776543
No 246
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.44 E-value=0.014 Score=45.57 Aligned_cols=137 Identities=15% Similarity=0.015 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccchHhHHHh-hHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcccccccchhhccc
Q 041627 35 PSLVVAGTNAVGTIVGIYLIDHFGRKKLALSS-LAGVIISLVLLSWAF-----ISVIGLALYITFFAPGMGPVPWTVNSE 108 (204)
Q Consensus 35 ~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e 108 (204)
.++.... ..+-+++.|.++|+.|+||..... ..+..+..+.+.+.+ +.......+...+.........+++.+
T Consensus 64 ~aia~ll-ia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~ 142 (438)
T COG2270 64 SAIAGLL-IALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPR 142 (438)
T ss_pred HHHHHHH-HHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhh
Confidence 3444444 677888999999999977765544 444444444454443 333444445555555666677899999
Q ss_pred ccCCcchhhhhhHHHHHHHHHHHHHHHHHH--HHH----------------HhhCcchhhhHHHHHHHHHHHHHHhhccC
Q 041627 109 VYREQYRGICGGMSATVNWISNLIVAQNFL--TVA----------------DLVGTGSTFLILAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 109 ~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 170 (204)
..++++-++..+.....+.+|+.+.-...- ... +...-|..+.+.++..++..+-.++..|+
T Consensus 143 ~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~ 222 (438)
T COG2270 143 LTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHD 222 (438)
T ss_pred hcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccc
Confidence 999988888888888888887765333321 111 11123556666666666666555555555
Q ss_pred CC
Q 041627 171 TQ 172 (204)
Q Consensus 171 ~~ 172 (204)
..
T Consensus 223 ~~ 224 (438)
T COG2270 223 AE 224 (438)
T ss_pred cc
Confidence 43
No 247
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.37 E-value=0.00054 Score=54.39 Aligned_cols=119 Identities=8% Similarity=0.048 Sum_probs=72.5
Q ss_pred CCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH-----------H-HHHHHHHHHHHH
Q 041627 26 FQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-----------F-ISVIGLALYITF 93 (204)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~ 93 (204)
+++...+.+. ....+...+|..+....--+..-|+++....++.++..+.-... . +..+.-..+...
T Consensus 252 fs~~f~~~~~-~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 252 FSPSFYGTLS-IVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred cCHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 5666655555 44444467777777666666677777666555544433321100 0 000001111111
Q ss_pred hcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 94 FAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 94 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
......-....+.+|+.|+..-|+.+++.....++|..++..+...+.+.++
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111222234778999999999999999999999999999999988887665
No 248
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.35 E-value=0.0083 Score=50.17 Aligned_cols=69 Identities=16% Similarity=0.249 Sum_probs=53.0
Q ss_pred hhhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc--chHhHHHhhHHHH
Q 041627 3 AFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVI 71 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~ 71 (204)
..++...+.++.+|+|.|+++ +|.+......+.........++|.+++|++..|+. .|....+.++...
T Consensus 401 ~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 401 SVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred HHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 345677788999999999985 89999998888877777778999999999999874 4444444333333
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0018 Score=49.79 Aligned_cols=121 Identities=15% Similarity=0.053 Sum_probs=80.4
Q ss_pred HHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc--chHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhccc
Q 041627 22 QMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPG 97 (204)
Q Consensus 22 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 97 (204)
..+|+++.+.+.+.+..... ..+.+....+..||.. -+..+.....++.-..+...... ..+.....+..+....
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~-m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLL-MLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred CccCCChhhheeeeehhhHH-HHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 45899999988887777666 5666777777777765 44444444443333333333222 2223333333444444
Q ss_pred ccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 98 MGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 98 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
..+....+.....|.++||+..|+....+.++-.++|.+.|.+..+
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 4455667888899999999999999999999999999999876544
No 250
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.33 E-value=0.0075 Score=47.75 Aligned_cols=126 Identities=16% Similarity=0.128 Sum_probs=85.7
Q ss_pred hhhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--------
Q 041627 10 INTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-------- 81 (204)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-------- 81 (204)
.-++...+..|+++.|+++...+..=+..... ++.+.+...++.+|+|..+.=.++......+........
T Consensus 274 VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~-Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~ 352 (432)
T PF06963_consen 274 VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVF-GLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFS 352 (432)
T ss_pred HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 44556677888888999999988777777666 899999999999999998876666665544433322211
Q ss_pred ----HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHH
Q 041627 82 ----ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQN 136 (204)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 136 (204)
..++....+...+.=++--...-++.|..|+++||...|+-....++...+.-.+
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 1112222222222223334455778899999999999999999888776654433
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.31 E-value=0.0013 Score=51.19 Aligned_cols=104 Identities=18% Similarity=-0.006 Sum_probs=75.7
Q ss_pred HhHHHhhHHHHHHHHHHHHHH-----------HHHHHHHHHHHHhcccccccchhhcccccCCc---chhhhhhHHHHHH
Q 041627 61 KLALSSLAGVIISLVLLSWAF-----------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQ---YRGICGGMSATVN 126 (204)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~ 126 (204)
++++++.++..++.+++..+. ..+.+...+...+.++.-+...++..|.++++ +|.+.+...+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 345566666666666644432 13444455567777788888889999999865 4667788889999
Q ss_pred HHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 127 WISNLIVAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 127 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
++|+.++....+++.+..+|...|.+.++..+++.+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999988887777765543
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.20 E-value=0.029 Score=46.23 Aligned_cols=156 Identities=15% Similarity=0.090 Sum_probs=102.9
Q ss_pred hhhhhHHhhhH-HHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHHHHHHH----
Q 041627 8 TGINTVMYYSP-TIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAF---- 81 (204)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~---- 81 (204)
.+++++..-+- .+...++.+........+..... .....+.+++++|. +||-+++.++..+..++..+.....
T Consensus 51 ~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~-~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~ 129 (571)
T KOG1237|consen 51 LAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGT-QFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPA 129 (571)
T ss_pred HhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34444433333 33445777776656666666655 78889999999996 5898988888887777755543322
Q ss_pred -----------------------HHHHHHHHHHHHhcccccccchhhcccccCC----cchh--hhhhHHHHHHHHHHHH
Q 041627 82 -----------------------ISVIGLALYITFFAPGMGPVPWTVNSEVYRE----QYRG--ICGGMSATVNWISNLI 132 (204)
Q Consensus 82 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~----~~r~--~~~~~~~~~~~~g~~~ 132 (204)
..+.....+...+.++.-+....+-+|-+++ +.+. .-+...+...+.|..+
T Consensus 130 l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~ 209 (571)
T KOG1237|consen 130 LLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALL 209 (571)
T ss_pred cCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHH
Confidence 0111122223335556567777888888872 2222 4566777777888888
Q ss_pred HHHHHHHHHHhhCcchhhhHHHHHHHHHHHHH
Q 041627 133 VAQNFLTVADLVGTGSTFLILAGIAVLAVVFV 164 (204)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 164 (204)
+..+..+..+..+|...|.+..+...++.++.
T Consensus 210 a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 210 AQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 88888888888999988888877777665443
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.20 E-value=0.011 Score=47.65 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=70.2
Q ss_pred HHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHH--H-------------------------------HHHHHHHH
Q 041627 43 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA--F-------------------------------ISVIGLAL 89 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~-------------------------------~~~~~~~~ 89 (204)
.++...+..+++||++|++++-+..........+.++. + |...+...
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 56777888999999999998776555554444433322 1 11222223
Q ss_pred HHHHhcccccc-cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 90 YITFFAPGMGP-VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 90 ~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
..-..+....+ ..|.+++|+++.++-.+-+++....+++|.++++.....+.+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334 468999999999999999999999999999999998887766
No 254
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.13 E-value=0.017 Score=46.64 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=66.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccc--hH-----hHHHhhHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGR--KK-----LALSSLAGVIISLVLLSWAF-----------ISVIGLALYITF 93 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~gr--r~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 93 (204)
++..+.-... -++.+++.+++=.|.+| |. =+.+++++..++...+.... ++++...++...
T Consensus 311 ~~~qslNp~~-ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 311 AMFQSINAFA-VMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHhHhHHH-HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 3334433333 34455555555444422 21 14556666666655543211 556666777788
Q ss_pred hcccccccchhhcccccCCcchhhhhhHHHHHH-HHHHHHHHHHHHH
Q 041627 94 FAPGMGPVPWTVNSEVYREQYRGICGGMSATVN-WISNLIVAQNFLT 139 (204)
Q Consensus 94 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~~~~~ 139 (204)
+.....|+..+.++++.|++.|++.+|+..... .++..+++.+...
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999886633 4555555555443
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.10 E-value=0.01 Score=47.26 Aligned_cols=114 Identities=14% Similarity=0.152 Sum_probs=76.3
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcc---ccchHhHHHhhHHHHHHHHHHHHHH-------------------
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDH---FGRKKLALSSLAGVIISLVLLSWAF------------------- 81 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~grr~~~~~~~~~~~~~~~~~~~~~------------------- 81 (204)
.+.++.....+.++....+...+....+.+.+| +||++.+.++..+..+..++.....
T Consensus 273 ~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~ 352 (461)
T KOG3098|consen 273 LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPS 352 (461)
T ss_pred ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccc
Confidence 344444444444555555567777888888865 6889988888877776666554321
Q ss_pred -HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 82 -ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
....++.++.|..-....+..+.++.+.. +++|..+.++.-....+.+.++-...+
T Consensus 353 ~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 353 YYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 23444556666666666777888888888 677888888888877777766555444
No 256
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.08 E-value=0.0023 Score=53.38 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=53.4
Q ss_pred hhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccc--hHhHHHhhHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGR--KKLALSSLAGVIISL 74 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr--r~~~~~~~~~~~~~~ 74 (204)
+.....++++..|+|.++++ +|+++.+.+.+.........+++.+++|+++||+++ |+.+..+.++..+..
T Consensus 340 ~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 340 VIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 45566778899999999885 899999888777766654468999999999999984 455555555555443
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.99 E-value=0.061 Score=42.73 Aligned_cols=154 Identities=11% Similarity=-0.033 Sum_probs=79.1
Q ss_pred HhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH----HHHHH--------
Q 041627 14 MYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL----LSWAF-------- 81 (204)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~----~~~~~-------- 81 (204)
-+..|.++.+..-+.-...-.......+..++.++..|...||..|.+....+.+..-++... .....
T Consensus 22 ~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~ 101 (432)
T PF06963_consen 22 EFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQ 101 (432)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 344455555542222111222333333446778888899999999999866655443322221 11110
Q ss_pred --HHH---HH----HHHHHHHhccccc-ccchhhccccc--CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 041627 82 --ISV---IG----LALYITFFAPGMG-PVPWTVNSEVY--REQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGST 149 (204)
Q Consensus 82 --~~~---~~----~~~~~~~~~~~~~-~~~~~~~~e~~--p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (204)
... +. ...+...+..+.. .+---++..+. +++.+.+..+...-.=....+++|.+.|.+.+..+....
T Consensus 102 ~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~ 181 (432)
T PF06963_consen 102 SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIA 181 (432)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHH
Confidence 001 11 1111111111111 11111222222 344455556666666666789999999999888887777
Q ss_pred hhHHHHHHHHHHHHHHhh
Q 041627 150 FLILAGIAVLAVVFVILF 167 (204)
Q Consensus 150 ~~~~~~~~~i~~~~~~~~ 167 (204)
..+.++..+++...-+++
T Consensus 182 ~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 182 AIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777777766544443
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.89 E-value=0.019 Score=45.73 Aligned_cols=134 Identities=7% Similarity=-0.057 Sum_probs=94.6
Q ss_pred hhhhhhhhHHhhhHHHHHHcCCC-----chhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHH
Q 041627 5 QQFTGINTVMYYSPTIVQMAGFQ-----SNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW 79 (204)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 79 (204)
+.+.++..-....+...+..+.. ....+............+.+++.+.+.|++|.|..+.++.............
T Consensus 20 ~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~ 99 (461)
T KOG3098|consen 20 FLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF 99 (461)
T ss_pred HHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh
Confidence 34445555445555555442221 2233555444444447899999999999999999999988887776665555
Q ss_pred HH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 80 AF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
.. +.......+.|++.+..+.---.|++|..+++.+.+..++.......+.++|+....
T Consensus 100 ~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 100 PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 44 556666677777777667777799999999999999999999988888777766543
No 259
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.87 E-value=0.00099 Score=49.00 Aligned_cols=152 Identities=13% Similarity=0.018 Sum_probs=79.4
Q ss_pred HHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcc
Q 041627 19 TIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAP 96 (204)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 96 (204)
.+.+.+|+...+++.+......- ..+...+.|-++||-|||+.-+.-++..+++++- -.++ ..+++.+.+.|+...
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgS-smLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGS-SMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeehhcCccCCccceeeecccch-HHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHH
Confidence 34456788888878776665555 6788888899999999999866655555544431 1121 334444555544443
Q ss_pred cccccchh-hcccccCCcchhh-------hhhHHH-HHHHHHHHHHHHHHHHHHHhhC--cchhhhHHHHHHHHHHHHHH
Q 041627 97 GMGPVPWT-VNSEVYREQYRGI-------CGGMSA-TVNWISNLIVAQNFLTVADLVG--TGSTFLILAGIAVLAVVFVI 165 (204)
Q Consensus 97 ~~~~~~~~-~~~e~~p~~~r~~-------~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 165 (204)
...+..-. ++.|.- ++|+. .++=.. ..+.+.+++++.....+.+.++ .-.+|-..+.+..++..+..
T Consensus 140 LLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred HHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 33333222 344433 22321 112111 2334455556666666666654 33345443333334433333
Q ss_pred hhccCCCCc
Q 041627 166 LFVPETQGL 174 (204)
Q Consensus 166 ~~~~e~~~~ 174 (204)
--..|+.++
T Consensus 218 ~~W~ENygd 226 (454)
T KOG4332|consen 218 SSWSENYGD 226 (454)
T ss_pred hhhhhccCC
Confidence 334565444
No 260
>PRK03612 spermidine synthase; Provisional
Probab=96.73 E-value=0.13 Score=42.07 Aligned_cols=135 Identities=17% Similarity=0.190 Sum_probs=67.8
Q ss_pred HcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHH---HHHHHHH-H------HHHHHHHHHHH
Q 041627 23 MAGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS---LVLLSWA-F------ISVIGLALYIT 92 (204)
Q Consensus 23 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~---~~~~~~~-~------~~~~~~~~~~~ 92 (204)
-+|-+....+..++++..+ ..+|+.+++++.++.-|+.... -..+..++ ..+.... . .......+..+
T Consensus 44 ~~G~s~~~~~~ii~~fl~g-lalGs~l~~~~~~~~~~~~~~~-e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFA-MGVGALLSKYLLRDAAAGFVAV-ELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HhCchHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577777767777777777 6888888887764332222211 11111111 1011000 0 11111222233
Q ss_pred HhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhhHHHHHHHHH
Q 041627 93 FFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD-LVGTGSTFLILAGIAVLA 160 (204)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 160 (204)
+..+...|...-+..+.. .++-+...|-.+....+|+++|..+.+++.- .+|.....++.+.+.++.
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~ 189 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 333443444333333221 1223567888888899999999998877554 566544444444444333
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.70 E-value=0.00041 Score=56.49 Aligned_cols=141 Identities=16% Similarity=0.194 Sum_probs=0.0
Q ss_pred hhhhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhcccc--chHhHHHhhHHHHHHHHH---H
Q 041627 4 FQQFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISLVL---L 77 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~---~ 77 (204)
..+.....++.+|+|.|+++ ++.++.+.+.+.........++|.+++|++..|+. .|..+....+...+..+. .
T Consensus 315 ~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~ 394 (539)
T PF03137_consen 315 VFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPL 394 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566678889999999985 89999988888877777778999999999999874 344443333333322222 1
Q ss_pred HHHH------------H-----------------------------------------HHHHHHHHHHHhcccccccchh
Q 041627 78 SWAF------------I-----------------------------------------SVIGLALYITFFAPGMGPVPWT 104 (204)
Q Consensus 78 ~~~~------------~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 104 (204)
.+.. . .+++..++..+...........
T Consensus 395 ~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~ 474 (539)
T PF03137_consen 395 FFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTL 474 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhe
Confidence 1100 0 0001111111111122222334
Q ss_pred hcccccCCcchhhhhhHHHHHHHH-HHHHHHHHHHHHHHhh
Q 041627 105 VNSEVYREQYRGICGGMSATVNWI-SNLIVAQNFLTVADLV 144 (204)
Q Consensus 105 ~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 144 (204)
..-...|+++|+.+.|+.....++ |.+-+|.++|.+.|..
T Consensus 475 i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 475 ITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -----------------------------------------
T ss_pred eeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 445778899999999988877665 4566888888887754
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.46 E-value=0.021 Score=44.65 Aligned_cols=124 Identities=15% Similarity=0.224 Sum_probs=64.7
Q ss_pred HHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhh
Q 041627 42 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGG 120 (204)
Q Consensus 42 ~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 120 (204)
.+.+..+...+..+|+.-+.=......+..++.+..++.. ...-++.........+.+-+...-.+..+|+. +.+
T Consensus 71 P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~~----~l~ 146 (402)
T PF02487_consen 71 PSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHFYGKS----SLS 146 (402)
T ss_pred HHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHhcCcc----ccc
Confidence 3567778889999987633323344445555555555543 22222333333334444444433344456543 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCc--chhhhHHHHHHHHHHHHHHhhccC
Q 041627 121 MSATVNWISNLIVAQNFLTVADLVGT--GSTFLILAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~e 170 (204)
-...+...++.+|+...-.+.. .++ +..+.....++++..+..++.+|+
T Consensus 147 ~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 147 AWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4444445567777776655554 554 446666666665544444444543
No 263
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.08 E-value=0.21 Score=40.29 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=27.7
Q ss_pred hhhHHHHHH--cCCCchhhhhhH--HHHHHHHHHHHHHH-hhhhhccccchHhHHHhh
Q 041627 15 YYSPTIVQM--AGFQSNQLALLP--SLVVAGTNAVGTIV-GIYLIDHFGRKKLALSSL 67 (204)
Q Consensus 15 ~~~~~~~~~--~g~~~~~~~~~~--~~~~~~~~~~~~~~-~g~l~dr~grr~~~~~~~ 67 (204)
--.|.++++ .+.+-++.+... +..... -.+-+++ =...+.|+||||..++-.
T Consensus 21 gsiPflL~~~~~~~sy~q~~~fSla~~PfSl-KlLWaPiVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 21 GSIPFLLQSMAKKVSYSQQAIFSLASYPFSL-KLLWAPIVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred ccchhhhccccCCCChhHheeeeeeechhHH-HHhhhhhhhhhcccccCCcchhhhHH
Confidence 346777777 566655544322 222222 2332222 244455899999876643
No 264
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.04 E-value=0.24 Score=38.68 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=34.3
Q ss_pred hHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc-----cccchHhHHHh
Q 041627 12 TVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLID-----HFGRKKLALSS 66 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~grr~~~~~~ 66 (204)
+...-.|.+++.-|.|-++.+....... -.--.+++.++.| |+||||..++-
T Consensus 48 GL~~~iP~lL~ak~vSyt~~a~fS~ay~---P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 48 GLIGAIPLLLQAKGVSYTSQAIFSFAYW---PFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hHhhhhHHHhcCCCcchhhhhhhhhhhh---HHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 3344778888877777666454322222 1335778888889 99999986653
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.58 E-value=1.9 Score=34.84 Aligned_cols=113 Identities=13% Similarity=0.073 Sum_probs=73.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH----------------------------
Q 041627 30 QLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---------------------------- 81 (204)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---------------------------- 81 (204)
....+=+....=.+++..++..++.+++.|++++-+.........+++++..
T Consensus 62 ~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ 141 (509)
T COG3202 62 SISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWF 141 (509)
T ss_pred hhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceee
Confidence 3334333333323677888889999999999987766655555444443321
Q ss_pred ------HHHHHHHHHHHHhcccccc-cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 82 ------ISVIGLALYITFFAPGMGP-VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
|.........-..+....+ ..|....|++..++-.+-+++.+..++++..+++.+..++..
T Consensus 142 ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 142 ILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred eEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1222222333333333333 567888999999998899999999999999988888776654
No 266
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.33 E-value=0.74 Score=37.13 Aligned_cols=82 Identities=10% Similarity=-0.017 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHH------HHHhhCcchhhhHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLT------VADLVGTGSTFLILAG 155 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~ 155 (204)
++++...++..++.....|+...++....|++..+..+++.......+..++..+.+. ..+.......|+..+.
T Consensus 395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~ 474 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGV 474 (498)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHH
Confidence 5667777888888888999999999999999999999998888777777777776662 2223333445666555
Q ss_pred HHHHHHHH
Q 041627 156 IAVLAVVF 163 (204)
Q Consensus 156 ~~~i~~~~ 163 (204)
...+..+.
T Consensus 475 v~i~~~~~ 482 (498)
T COG3104 475 VAIVIGIL 482 (498)
T ss_pred HHHHHHHH
Confidence 55544443
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.75 E-value=0.54 Score=37.07 Aligned_cols=60 Identities=15% Similarity=0.038 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVA 141 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 141 (204)
+..+.+.+..|..++..+...+..+.|-.|+++|-.++|.....-.+|..+++.+.-.+.
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 555566777788888888888888888889999999999999988888777777665443
No 268
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=93.09 E-value=0.46 Score=38.40 Aligned_cols=125 Identities=9% Similarity=-0.020 Sum_probs=65.6
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCc-hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhH--HHHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQS-NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLA--GVIISLVLLSWA 80 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~--~~~~~~~~~~~~ 80 (204)
....++++-+..|.-.+-++..-++ ...|..-.+.... +++.++..|++-.++.|-.-+.++.. +.....+++...
T Consensus 272 a~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tll-ga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t 350 (511)
T TIGR00806 272 VFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLL-GAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS 350 (511)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHH-HHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc
Confidence 3455677777777777766654432 2334444555555 78999999999777744333333332 223333333333
Q ss_pred H--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHH
Q 041627 81 F--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWIS 129 (204)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 129 (204)
. +.-.+..++....-....++...-+++....+.-|..+|+......+-
T Consensus 351 ~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~L 401 (511)
T TIGR00806 351 HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATAL 401 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHH
Confidence 2 222222233333233333444455555565665677777766644333
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.24 E-value=5.1 Score=32.20 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcccccccchhhcccccCCcc
Q 041627 85 IGLALYITFFAPGMGPVPWTVNSEVYREQY 114 (204)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 114 (204)
+....+.+.+.+...+....+.+ .+|++.
T Consensus 110 ~~~v~~~g~~~~~~q~s~~gla~-~fp~~~ 138 (437)
T TIGR00939 110 MASVVIINSGMALLQGSLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHhhhhhhcccchhhcc-cCCHHH
Confidence 33344445555555556666666 566543
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.63 E-value=5.7 Score=31.47 Aligned_cols=19 Identities=11% Similarity=-0.314 Sum_probs=11.2
Q ss_pred hhhhHHhhhHHHHHHcCCC
Q 041627 9 GINTVMYYSPTIVQMAGFQ 27 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~ 27 (204)
.++.+.+-.+++.+++-.+
T Consensus 33 pWN~fiTa~~y~~~~~~~~ 51 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRFPGY 51 (406)
T ss_pred chHhhhccHHHHHhhcCCC
Confidence 3556666667776665333
No 271
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=87.60 E-value=0.42 Score=38.60 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=47.3
Q ss_pred ccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 100 PVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 100 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
....++-+|+..++++++..++.......+..++|..........|.++...+.....++
T Consensus 407 ~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 407 TALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred chHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999888888888877655554444433
No 272
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=87.26 E-value=2.4 Score=28.57 Aligned_cols=81 Identities=10% Similarity=0.144 Sum_probs=46.0
Q ss_pred hhhccccchHhHHHhhHHH-HHHHHHHHHHH--------HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHH
Q 041627 52 YLIDHFGRKKLALSSLAGV-IISLVLLSWAF--------ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMS 122 (204)
Q Consensus 52 ~l~dr~grr~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 122 (204)
..+||.-||-.+..+.-.. .++.+...... ...+.+..-..+++.+..++.|..++-...+++.|...|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 3568887776655543222 22222211111 11222233334444555667788888888888899999988
Q ss_pred HHHHHHHHHH
Q 041627 123 ATVNWISNLI 132 (204)
Q Consensus 123 ~~~~~~g~~~ 132 (204)
..-.+++-+.
T Consensus 136 e~~~N~~r~~ 145 (153)
T PF11947_consen 136 EFKRNWGRMW 145 (153)
T ss_pred HHHHhHHHHH
Confidence 8877766544
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=87.21 E-value=10 Score=30.20 Aligned_cols=63 Identities=11% Similarity=0.055 Sum_probs=39.9
Q ss_pred hhhhhhhhhHHhhhHHHHHHc---CCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhh
Q 041627 4 FQQFTGINTVMYYSPTIVQMA---GFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSL 67 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 67 (204)
....+|++-+..|...+-++. +-.....|..-...... +.++.+..|++..++.+-.-+.++.
T Consensus 257 a~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tll-gA~~al~~g~v~~~w~~~~~l~l~~ 322 (412)
T PF01770_consen 257 AFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLL-GAIAALLAGYVKVNWDRWGELALGV 322 (412)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHH-HHHHHHHHhHhhcchHHHHHHHHHH
Confidence 345667777777777777766 22333335555555555 7889999999977777655444433
No 274
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=81.71 E-value=19 Score=28.30 Aligned_cols=122 Identities=10% Similarity=-0.013 Sum_probs=62.7
Q ss_pred hhhhhhhhhHHhhhHHHHHHcCCCc--hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhH--HHHHHHHHHHH
Q 041627 4 FQQFTGINTVMYYSPTIVQMAGFQS--NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLA--GVIISLVLLSW 79 (204)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~--~~~~~~~~~~~ 79 (204)
....+|++-+..|.-.+-++..-++ ...|..-...... ++++.+..|++.-++.|..-++++.. ..+...+.+..
T Consensus 244 Al~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlL-Ga~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~ 322 (433)
T KOG3810|consen 244 ALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLL-GAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ 322 (433)
T ss_pred HHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHH-HHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc
Confidence 3455677777777776666653111 1223333444445 78999999999888877754444333 23333333333
Q ss_pred HH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHH
Q 041627 80 AF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVN 126 (204)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 126 (204)
.. +...+...+....-....+++..-+++....+.-|..+|+.....
T Consensus 323 t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 323 TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHH
Confidence 22 222222222222222233444455556666666666777665543
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=80.01 E-value=3.2 Score=33.44 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhH
Q 041627 34 LPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLA 68 (204)
Q Consensus 34 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 68 (204)
+-.+.......+-+...-++.||+|-|+.++.+..
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~ 370 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVN 370 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhH
Confidence 33444444467788888999999995555444433
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=76.47 E-value=2.2 Score=32.61 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=63.3
Q ss_pred HHHHHHHhhhhhccc--cchHhHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhh
Q 041627 43 NAVGTIVGIYLIDHF--GRKKLALSSLAGVIISLVLLSWAF-ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICG 119 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~--grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 119 (204)
+.+-.+......||+ |.|-.+ ...+.+.+.++.++.. ...-+........+.+.+-+.+...+..+|+..-+
T Consensus 75 sL~iKl~~Pff~~rfpf~~Ri~~--~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i~--- 149 (409)
T KOG3880|consen 75 SLAIKLTAPFFIHRFPFGFRIAL--VVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSIVIA--- 149 (409)
T ss_pred HHHHHHhchhhhhhcccchHHHH--HHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCceec---
Confidence 445667777888875 555432 2333333433334433 33333444444555666666666666556554321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh--CcchhhhHHHHHHHHHHHHHHhhccC
Q 041627 120 GMSATVNWISNLIVAQNFLTVADLV--GTGSTFLILAGIAVLAVVFVILFVPE 170 (204)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~e 170 (204)
++ ..+...++.+|..-...+.+.. ..+.+.++...++++.....++.+++
T Consensus 150 ~W-SSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 150 GW-SSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred cc-cCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 11 2222234555665555555433 35667777777776665555555543
No 277
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=76.38 E-value=37 Score=27.09 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 119 GGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 119 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
.+.....-.....+.|.+.|.+....+.+..-..+++...+
T Consensus 177 natir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 177 NATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 35555555556778888888887776665544444554444
No 278
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.15 E-value=3.8 Score=30.63 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=34.9
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhh---------hhccccchHh
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIY---------LIDHFGRKKL 62 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~---------l~dr~grr~~ 62 (204)
....+|+-.++++.|.++...+.++-..... .++..++.|. -.||+|||+.
T Consensus 34 ScWFTYlllfltqiglsp~~~AmlML~GQVt-da~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 34 SCWFTYLLLFLTQIGLSPSSRAMLMLIGQVT-DAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHhhHHH-HHHhcccccccccccccHHHhhhhcceee
Confidence 3455677778889999998766444444333 6777777653 3589999975
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.08 E-value=12 Score=23.52 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=17.6
Q ss_pred HHHHHHHhhhhhccc-cchHhHHHhhH
Q 041627 43 NAVGTIVGIYLIDHF-GRKKLALSSLA 68 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~-grr~~~~~~~~ 68 (204)
+.+.....||+.||+ |.++..++...
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 456666778999996 77776554433
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=73.43 E-value=49 Score=27.08 Aligned_cols=69 Identities=12% Similarity=-0.120 Sum_probs=44.6
Q ss_pred HHHhcccccccchhhcccccC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 91 ITFFAPGMGPVPWTVNSEVYR-EQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 91 ~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
.+.............+.|.+| +++|..-+|-.....++..++.....+.+.+..||.....+.-.+.++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344444444455566777776 456777777777776666666666668889999997665554444433
No 281
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=73.42 E-value=20 Score=28.65 Aligned_cols=46 Identities=11% Similarity=-0.002 Sum_probs=37.9
Q ss_pred ccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 100 PVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 100 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
....+..+++.|+..-|+-+.+.+...++|+-.-..+...+.|.+.
T Consensus 388 v~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 388 VSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3445777899999999999999999999999887777777776544
No 282
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=73.34 E-value=20 Score=22.52 Aligned_cols=26 Identities=19% Similarity=0.161 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhhccccchHhHHHhhH
Q 041627 43 NAVGTIVGIYLIDHFGRKKLALSSLA 68 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~~~~~~~ 68 (204)
..++..+.+.+.|..|.+..+.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (141)
T TIGR00880 100 PLLGPPLGGVLAQFLGWRAPFLFLAI 125 (141)
T ss_pred HHHhHHhHHHHhcccchHHHHHHHHH
Confidence 67777777888887776665544433
No 283
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=72.78 E-value=21 Score=27.97 Aligned_cols=10 Identities=30% Similarity=0.388 Sum_probs=4.1
Q ss_pred HHHhhhhhcc
Q 041627 47 TIVGIYLIDH 56 (204)
Q Consensus 47 ~~~~g~l~dr 56 (204)
....|++..|
T Consensus 12 ii~~G~~~~~ 21 (385)
T PF03547_consen 12 IILLGYLLGR 21 (385)
T ss_pred HHHHHHHHHH
Confidence 3333444443
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.90 E-value=51 Score=26.63 Aligned_cols=56 Identities=14% Similarity=0.098 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNF 137 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 137 (204)
+...+..++.+...+-..+.+..+..+..++++|..+-.+....-.+|-..|..+.
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566667777777778888888888889998777777776666666555543
No 285
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=66.57 E-value=13 Score=29.15 Aligned_cols=98 Identities=8% Similarity=0.021 Sum_probs=56.3
Q ss_pred HHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhH
Q 041627 44 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF--ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGM 121 (204)
Q Consensus 44 ~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 121 (204)
.+.-++.=.+.|-..-|++++.-.+..........+.. +.+-++-++.|... ..--..++|+-+..+++++-++.|.
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~y 134 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTGY 134 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHHH
Confidence 33444445577888888877665444444333333322 22222222222111 1123456788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 041627 122 SATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 122 ~~~~~~~g~~~~~~~~~~~~~ 142 (204)
.....-.|-..+..+...+..
T Consensus 135 ~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 135 CRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hHHHHHHHhHHHhHHHHHHhh
Confidence 988877777776666655544
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.56 E-value=30 Score=21.84 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=28.1
Q ss_pred CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 111 REQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 111 p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
.++.++.+.++-...-.+++++.+...|++.+.+-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35667788888888888888888888999988764
No 287
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=64.82 E-value=66 Score=25.20 Aligned_cols=67 Identities=10% Similarity=-0.046 Sum_probs=41.3
Q ss_pred HHHHHHhhhhhccccchHhHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccccchhhccccc
Q 041627 44 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-ISVIGLALYITFFAPGMGPVPWTVNSEVY 110 (204)
Q Consensus 44 ~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 110 (204)
+..+++.+.+..++|-|.++.++..........-..-. ..++....+.|.+.+..+..--+|+++.-
T Consensus 72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 72 IDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 55677777999999999988776555443322221111 44555566666666666655556666553
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=62.01 E-value=84 Score=26.14 Aligned_cols=45 Identities=11% Similarity=-0.011 Sum_probs=34.6
Q ss_pred cccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 99 GPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 99 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
.....+.-+.+.+|..-|+.+.+.+...++|+-.-..+.-++.|.
T Consensus 423 FVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 423 FVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 344456777888999999999999999999988766665555553
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=57.61 E-value=99 Score=24.83 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=55.1
Q ss_pred hhhHHHH-HHHHHHHHHHHhhhhhccccchHhHHHhh-HHHHHHHHHHHHH--------H-HHHHHHHHHHHHhcccccc
Q 041627 32 ALLPSLV-VAGTNAVGTIVGIYLIDHFGRKKLALSSL-AGVIISLVLLSWA--------F-ISVIGLALYITFFAPGMGP 100 (204)
Q Consensus 32 ~~~~~~~-~~~~~~~~~~~~g~l~dr~grr~~~~~~~-~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~ 100 (204)
..+.... ......+|.+...++-++= ||....... =...+..+.+... . ++.+....+.+...+-..+
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3333333 4454777766666665553 444322221 1222222221110 0 5566666677777777778
Q ss_pred cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 101 VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 101 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
....+..+..|++++-.+-.+... ...+++..+.+.+
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~-fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVF-FLVGGLALGSLLS 399 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHH-HHHHHHHHhhHHH
Confidence 888899999888887644444444 4344444444433
No 290
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=56.51 E-value=44 Score=21.07 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=33.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH
Q 041627 29 NQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL 76 (204)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 76 (204)
+..+-....+..+ .+..++++++..|+..+-+-=.++..++.++..+
T Consensus 54 ~~fGRvYAAYGGv-fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 54 AAFGRVYAAYGGV-FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred ccchhHHHHhhhh-HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 3345566666666 7999999999999987776656666666555443
No 291
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=56.36 E-value=24 Score=22.18 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=22.9
Q ss_pred HHHhhCcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 041627 140 VADLVGTGSTFLILAGIAVLAVVFVILFVPETQG 173 (204)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~ 173 (204)
-.+..+|..++++...++++...+.+.+.|++.-
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 3456678888877666666665566667788754
No 292
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=55.21 E-value=59 Score=22.74 Aligned_cols=43 Identities=5% Similarity=-0.204 Sum_probs=24.0
Q ss_pred cchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041627 101 VPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADL 143 (204)
Q Consensus 101 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 143 (204)
...+.+.+..|+++|.++.-+......+--.+.-....++.+.
T Consensus 16 ~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~ 58 (183)
T PF03741_consen 16 FVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI 58 (183)
T ss_pred HHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3345556668887777666554444444444444445555554
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=55.08 E-value=1.2e+02 Score=25.07 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=37.2
Q ss_pred cccchhhcccccCC-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhhHHHHHHHH
Q 041627 99 GPVPWTVNSEVYRE-QYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFLILAGIAVL 159 (204)
Q Consensus 99 ~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (204)
.......+.|.+|. +++..-+|-.....++...+...+.+.+.+..||.....+.-.+.++
T Consensus 300 E~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 300 EVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 34444666777764 44455556555555555555567778888899998765554444433
No 294
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=54.71 E-value=20 Score=26.58 Aligned_cols=26 Identities=12% Similarity=-0.093 Sum_probs=12.8
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 113 QYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 113 ~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
-.|.-+.|+.....+..+.+.+...+
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 33444555555555555555555443
No 295
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=53.29 E-value=9.1 Score=25.00 Aligned_cols=7 Identities=0% Similarity=0.092 Sum_probs=2.8
Q ss_pred hhhhHHH
Q 041627 148 STFLILA 154 (204)
Q Consensus 148 ~~~~~~~ 154 (204)
|+++++.
T Consensus 2 W~l~~ii 8 (130)
T PF12273_consen 2 WVLFAII 8 (130)
T ss_pred eeeHHHH
Confidence 3444333
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=53.22 E-value=12 Score=27.79 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=23.3
Q ss_pred chhhhhhHHHHHHHHHHHHHHHH--HH-HHHH--hhCcchhhhHHHHHHHHHHHH
Q 041627 114 YRGICGGMSATVNWISNLIVAQN--FL-TVAD--LVGTGSTFLILAGIAVLAVVF 163 (204)
Q Consensus 114 ~r~~~~~~~~~~~~~g~~~~~~~--~~-~~~~--~~~~~~~~~~~~~~~~i~~~~ 163 (204)
+|+.-........++|.++.... .+ -..+ ...|+..+.+.+.+..+-+++
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIl 57 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLIL 57 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555556666554333 22 1111 123666666655555444433
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=52.79 E-value=46 Score=25.89 Aligned_cols=56 Identities=9% Similarity=-0.008 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNF 137 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 137 (204)
+..+++.+.-|..++..+...+--+.+-.++++|-.+++.....-.+|-.+++.+.
T Consensus 343 ~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 343 WIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 44555566667777777776666666667889999999988877777766666554
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=51.48 E-value=1e+02 Score=23.13 Aligned_cols=44 Identities=20% Similarity=0.182 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhcccccccchhhcccc--cCCcchhhhhhHHHHHH
Q 041627 83 SVIGLALYITFFAPGMGPVPWTVNSEV--YREQYRGICGGMSATVN 126 (204)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~e~--~p~~~r~~~~~~~~~~~ 126 (204)
.+.+..++.|.+.=+.+++.-....|. ..|++-|.-.|+.-..+
T Consensus 206 ~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfG 251 (267)
T PF07672_consen 206 FFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFG 251 (267)
T ss_pred HHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHH
Confidence 344455566666656666654444443 23444444444444433
No 299
>PRK11469 hypothetical protein; Provisional
Probab=49.49 E-value=58 Score=22.91 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=15.3
Q ss_pred HHHHHHhhhhhccccchHhHHHhhHHHHHHH
Q 041627 44 AVGTIVGIYLIDHFGRKKLALSSLAGVIISL 74 (204)
Q Consensus 44 ~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 74 (204)
..|..++.++.+++|||.-++-+.++..++.
T Consensus 149 ~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 149 TLGMMVGRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555666655555555444443
No 300
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=46.42 E-value=1.2e+02 Score=22.57 Aligned_cols=50 Identities=6% Similarity=-0.073 Sum_probs=28.2
Q ss_pred ccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 041627 96 PGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVG 145 (204)
Q Consensus 96 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (204)
++-+....+.+.+.+|+++|-++.=+......+--.+.-....++.+.+.
T Consensus 31 ~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l~~ 80 (254)
T COG0861 31 GIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTLTQ 80 (254)
T ss_pred HhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34455566777888898888776654444433444443444444444433
No 301
>PRK02237 hypothetical protein; Provisional
Probab=45.75 E-value=77 Score=20.07 Aligned_cols=45 Identities=7% Similarity=0.152 Sum_probs=31.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHHHH
Q 041627 31 LALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL 76 (204)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 76 (204)
.+-....+..+ .++.++++++..|+..+-+-=.++..++.++..+
T Consensus 58 ~GRvYAAYGGv-yI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 58 FGRVYAAYGGV-YVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhHHHHhhhH-HHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 45566666666 7899999999999987666555666655555443
No 302
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=45.75 E-value=1.8e+02 Score=25.44 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=19.2
Q ss_pred HHHHHHhhhhhccc----cchHhHHHhhHHHHHHHHHHHH
Q 041627 44 AVGTIVGIYLIDHF----GRKKLALSSLAGVIISLVLLSW 79 (204)
Q Consensus 44 ~~~~~~~g~l~dr~----grr~~~~~~~~~~~~~~~~~~~ 79 (204)
+..+.+.+-++|.= ||.+-+.++.+.+.++.+....
T Consensus 37 l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~l 76 (704)
T TIGR01666 37 LILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVEL 76 (704)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677753 4555555655555555554433
No 303
>PF12832 MFS_1_like: MFS_1 like family
Probab=42.55 E-value=69 Score=18.64 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=27.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhCcchhhh
Q 041627 117 ICGGMSATVNWISNLIVAQNFLTVADLVGTGSTFL 151 (204)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 151 (204)
.-.|+......+...+++++.+.+.|..+.+....
T Consensus 35 ~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 35 SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 35677777778888999999999999988655543
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=42.12 E-value=8.4 Score=29.28 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=0.0
Q ss_pred HHhcccccccchhhcccccCCcc
Q 041627 92 TFFAPGMGPVPWTVNSEVYREQY 114 (204)
Q Consensus 92 ~~~~~~~~~~~~~~~~e~~p~~~ 114 (204)
+.+.+...+..+.+.+. +|++.
T Consensus 8 ~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 8 GFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp -----------------------
T ss_pred HhhhHHHhccHHHHHhc-CCHHH
Confidence 34444445555566664 56544
No 305
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=41.62 E-value=64 Score=18.03 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=16.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhccccchHhHH
Q 041627 32 ALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLAL 64 (204)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 64 (204)
.............+|..++.++.++++++.-.+
T Consensus 26 ~~~ig~~~~~~~~~G~~~G~~~~~~~~~~~~~i 58 (67)
T PF02659_consen 26 ALIIGIFQFIMPLLGLLLGRRLGRFIGSYAEWI 58 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455555555555555554333
No 306
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=40.97 E-value=68 Score=21.33 Aligned_cols=22 Identities=9% Similarity=0.179 Sum_probs=16.3
Q ss_pred hcccccCCcchhhhhhHHHHHH
Q 041627 105 VNSEVYREQYRGICGGMSATVN 126 (204)
Q Consensus 105 ~~~e~~p~~~r~~~~~~~~~~~ 126 (204)
-+.|++|+..|....+......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~ 80 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTS 80 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHH
Confidence 3679999999987776655533
No 307
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=40.67 E-value=1.6e+02 Score=25.62 Aligned_cols=36 Identities=25% Similarity=0.142 Sum_probs=20.1
Q ss_pred HHHHHhhhhhccc----cchHhHHHhhHHHHHHHHHHHHH
Q 041627 45 VGTIVGIYLIDHF----GRKKLALSSLAGVIISLVLLSWA 80 (204)
Q Consensus 45 ~~~~~~g~l~dr~----grr~~~~~~~~~~~~~~~~~~~~ 80 (204)
....+.+-++|.= ||.+-++++..++.++.+.....
T Consensus 38 ~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 38 CLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred HHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455677754 44555666666666665554433
No 308
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=40.54 E-value=1.2e+02 Score=22.74 Aligned_cols=8 Identities=13% Similarity=0.119 Sum_probs=3.0
Q ss_pred HHHHhhhh
Q 041627 46 GTIVGIYL 53 (204)
Q Consensus 46 ~~~~~g~l 53 (204)
.+++.+.+
T Consensus 12 ~s~~~~l~ 19 (284)
T PF12805_consen 12 ASLLVGLL 19 (284)
T ss_pred HHHHHHHH
Confidence 33333333
No 309
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=39.34 E-value=1.4e+02 Score=21.28 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=25.4
Q ss_pred ccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCcch-hhhHHHHHHH
Q 041627 107 SEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLVGTGS-TFLILAGIAV 158 (204)
Q Consensus 107 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (204)
.+-.++++|-+..--......+...+....+..+.+.+|... .|-+.+++.+
T Consensus 28 t~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL 80 (203)
T PF01914_consen 28 TKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIIL 80 (203)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 344445554434333333333344445555666777777543 4445444433
No 310
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=39.12 E-value=31 Score=21.18 Aligned_cols=18 Identities=33% Similarity=0.438 Sum_probs=10.6
Q ss_pred HHHHHHHhhhhhccccch
Q 041627 43 NAVGTIVGIYLIDHFGRK 60 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr 60 (204)
..+.+++.|.+.||..||
T Consensus 88 ~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 88 FLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 455667777777777665
No 311
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=39.10 E-value=2e+02 Score=22.96 Aligned_cols=61 Identities=20% Similarity=0.207 Sum_probs=37.5
Q ss_pred hhhhhhhHHhhhHHHHHH-cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHHHhh
Q 041627 6 QFTGINTVMYYSPTIVQM-AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLALSSL 67 (204)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 67 (204)
+....++-..-.|.+..+ .|.++++...+.+..... +.+++++-.+-.-++|.|..+..+.
T Consensus 4 h~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~-sgi~tllq~~~~~~~G~~~P~~~g~ 65 (406)
T TIGR03173 4 HVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFA-CGIATLIQTLGIGPFGIRLPVVQGV 65 (406)
T ss_pred chHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH-HHHHHHHHhccccccCCccceeecC
Confidence 333444445556666655 599988777777777666 6777777643333567666555443
No 312
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=37.99 E-value=1.4e+02 Score=20.97 Aligned_cols=17 Identities=6% Similarity=0.067 Sum_probs=14.8
Q ss_pred HHHHHHHhhhhhccccc
Q 041627 43 NAVGTIVGIYLIDHFGR 59 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~gr 59 (204)
..++..+.|++.||..+
T Consensus 95 fi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 95 FIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 67888999999999875
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.93 E-value=1e+02 Score=19.25 Aligned_cols=27 Identities=26% Similarity=0.241 Sum_probs=13.8
Q ss_pred HHHHHhhhhhccccchHhHHHhhHHHH
Q 041627 45 VGTIVGIYLIDHFGRKKLALSSLAGVI 71 (204)
Q Consensus 45 ~~~~~~g~l~dr~grr~~~~~~~~~~~ 71 (204)
+|.+++-||-.+++-++.+.+.+++..
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 344444444446787765554444333
No 314
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=37.20 E-value=1.1e+02 Score=19.44 Aligned_cols=17 Identities=29% Similarity=0.194 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhhCc
Q 041627 130 NLIVAQNFLTVADLVGT 146 (204)
Q Consensus 130 ~~~~~~~~~~~~~~~~~ 146 (204)
..+-|.....+.+..|.
T Consensus 46 ~~ifP~~~~~vA~~lGi 62 (115)
T PF10066_consen 46 LSIFPNILDWVAKLLGI 62 (115)
T ss_pred HHhhhhHHHHHHHHHCC
Confidence 34455555666666663
No 315
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=36.52 E-value=52 Score=19.45 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=9.1
Q ss_pred HHHHHhhhhhccccchHhH
Q 041627 45 VGTIVGIYLIDHFGRKKLA 63 (204)
Q Consensus 45 ~~~~~~g~l~dr~grr~~~ 63 (204)
+-+.++=.+..|.|+|+.-
T Consensus 15 ~IA~~GD~iG~kvGKkrls 33 (79)
T PF11283_consen 15 LIAYLGDRIGSKVGKKRLS 33 (79)
T ss_pred HHHHHHHHHHHHHhHHHhh
Confidence 3334444444455666653
No 316
>COG2119 Predicted membrane protein [Function unknown]
Probab=33.49 E-value=1.7e+02 Score=20.61 Aligned_cols=35 Identities=9% Similarity=0.123 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhhhhccccchHhHHHhhHHHHHHH
Q 041627 40 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISL 74 (204)
Q Consensus 40 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 74 (204)
...+.++.+.+.++++|+..|.+-..+.++..+..
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 33467888889999999999988777666555443
No 317
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=32.93 E-value=72 Score=25.49 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=23.6
Q ss_pred hhHHhhhHHHHHHcCCCchhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 041627 11 NTVMYYSPTIVQMAGFQSNQLALLPSLVVAGTNAVGTIVGIYLID 55 (204)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 55 (204)
..-..|-|.+-+++|+++.+ ..-.+....+ -..+++++|++++
T Consensus 138 GTAaA~g~~f~e~~G~~~a~-~lgla~AT~G-Lv~g~liGgpi~~ 180 (398)
T TIGR00210 138 GTGAAWSPVFYDNYGFRNAT-EIAIACATFG-LVFGGIIGGPVAK 180 (398)
T ss_pred cHHHHHHHHHHHHcCchhHH-HHHHHHHHHH-HHHHHHHHHHHHH
Confidence 44556777766668887765 3333333333 3445555555443
No 318
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=30.18 E-value=1.2e+02 Score=17.70 Aligned_cols=27 Identities=22% Similarity=0.143 Sum_probs=16.3
Q ss_pred hccccchHhHHHhhHHHHHHHHHHHHH
Q 041627 54 IDHFGRKKLALSSLAGVIISLVLLSWA 80 (204)
Q Consensus 54 ~dr~grr~~~~~~~~~~~~~~~~~~~~ 80 (204)
-|+-.|++-+.+.+.+-..+.++....
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~ 37 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVV 37 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355567777777666666655554443
No 319
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=30.17 E-value=17 Score=27.30 Aligned_cols=11 Identities=18% Similarity=0.667 Sum_probs=0.0
Q ss_pred HHHHhhccCCC
Q 041627 162 VFVILFVPETQ 172 (204)
Q Consensus 162 ~~~~~~~~e~~ 172 (204)
++.+.++.+++
T Consensus 179 iLIWlY~H~~~ 189 (381)
T PF05297_consen 179 ILIWLYVHDQR 189 (381)
T ss_dssp -----------
T ss_pred HHHHHHhcCCC
Confidence 34455666664
No 320
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.26 E-value=1.2e+02 Score=18.66 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHhhCc
Q 041627 128 ISNLIVAQNFLTVADLVGT 146 (204)
Q Consensus 128 ~g~~~~~~~~~~~~~~~~~ 146 (204)
++++ .+.+.|+..+.++|
T Consensus 34 i~ai-Vg~i~Gf~~Qqls~ 51 (101)
T KOG4112|consen 34 IGAI-VGFIYGFAQQQLSV 51 (101)
T ss_pred HHHH-HHHHHHHHHHHHHH
Confidence 4444 35666767777776
No 321
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=26.87 E-value=1.1e+02 Score=24.26 Aligned_cols=45 Identities=18% Similarity=0.307 Sum_probs=20.4
Q ss_pred hHHhhhHHHHHHcCCCchhhhhhHHHHHHH---HHHHHHHHhhhhhccc
Q 041627 12 TVMYYSPTIVQMAGFQSNQLALLPSLVVAG---TNAVGTIVGIYLIDHF 57 (204)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~ 57 (204)
.-..+-|.+-+.+|++..+ ..-.+....+ +..+|.++.-++.+|.
T Consensus 139 TAaa~g~~fe~~~G~~~a~-~vg~a~AT~Glv~G~liGgpi~~~lirk~ 186 (368)
T PF03616_consen 139 TAAAFGPTFEELYGWEGAT-SVGMAAATFGLVVGGLIGGPIANWLIRKG 186 (368)
T ss_pred HHHHHHHHHHHhcChhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3344555555555886554 2222222222 1344444444544443
No 322
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=26.57 E-value=3.6e+02 Score=22.12 Aligned_cols=15 Identities=33% Similarity=0.233 Sum_probs=7.9
Q ss_pred hhhhccccchHhHHH
Q 041627 51 IYLIDHFGRKKLALS 65 (204)
Q Consensus 51 g~l~dr~grr~~~~~ 65 (204)
..+..|+++|+...+
T Consensus 105 ~~l~k~l~~~~~~~I 119 (465)
T PF03606_consen 105 NLLIKPLKGKKNPLI 119 (465)
T ss_pred HHHHHHhcCCcchhH
Confidence 455566665544333
No 323
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=26.17 E-value=3.3e+02 Score=21.53 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=65.6
Q ss_pred hhHHHHHHcCCCchhhhhhHHHH----HHHHHHHHHHHhhhhhcccc--chHhHHHhhHHHHHHHHHHHHHH--------
Q 041627 16 YSPTIVQMAGFQSNQLALLPSLV----VAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISLVLLSWAF-------- 81 (204)
Q Consensus 16 ~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~-------- 81 (204)
|+..=.++.|++++..+-..... +....+...+++-+++|+.| ++..+..+.....++.+.+....
T Consensus 145 W~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~ 224 (354)
T PF05631_consen 145 WMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTS 224 (354)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcc
Confidence 44444455677765544433322 22334556666667777664 56667776666666555443210
Q ss_pred -------------------HHHHHHHHHHHHhcccccccchhhcccccC---CcchhhhhhHHHHHHHHHHHHHHHHHHH
Q 041627 82 -------------------ISVIGLALYITFFAPGMGPVPWTVNSEVYR---EQYRGICGGMSATVNWISNLIVAQNFLT 139 (204)
Q Consensus 82 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p---~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 139 (204)
..++.+......+.+.. +..+-.+.| ++.+..-.|+.........++|..++..
T Consensus 225 ~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~sm----y~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 225 SSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSM----YLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred cccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHH----HHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 11223333333333333 333333333 3334556788888888888888888866
Q ss_pred HHH
Q 041627 140 VAD 142 (204)
Q Consensus 140 ~~~ 142 (204)
+..
T Consensus 301 l~s 303 (354)
T PF05631_consen 301 LLS 303 (354)
T ss_pred HHh
Confidence 554
No 324
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=26.16 E-value=1.9e+02 Score=24.53 Aligned_cols=57 Identities=5% Similarity=-0.174 Sum_probs=39.5
Q ss_pred HHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041627 88 ALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVADLV 144 (204)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (204)
.++.+..-........-+.-+-+|++.|..+.++......+|..+...+........
T Consensus 465 yvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 465 YVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred HHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344444433333333344555679999999999999999999999888887655544
No 325
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=25.45 E-value=2.2e+02 Score=19.17 Aligned_cols=21 Identities=14% Similarity=0.033 Sum_probs=15.4
Q ss_pred hcccccCCcchhhhhhHHHHH
Q 041627 105 VNSEVYREQYRGICGGMSATV 125 (204)
Q Consensus 105 ~~~e~~p~~~r~~~~~~~~~~ 125 (204)
-+.|++|+..|..........
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t 77 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTT 77 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHH
Confidence 467999999998666655543
No 326
>PRK10263 DNA translocase FtsK; Provisional
Probab=25.05 E-value=4.4e+02 Score=25.17 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=7.7
Q ss_pred HHHHHHHhhhhhcccc
Q 041627 43 NAVGTIVGIYLIDHFG 58 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~g 58 (204)
+.+|..+...+..-+|
T Consensus 65 GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 65 GMPGAWLADTLFFIFG 80 (1355)
T ss_pred chHHHHHHHHHHHHHh
Confidence 4445555544444444
No 327
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=25.03 E-value=2.6e+02 Score=19.97 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=4.8
Q ss_pred cchHhHHHhhHHH
Q 041627 58 GRKKLALSSLAGV 70 (204)
Q Consensus 58 grr~~~~~~~~~~ 70 (204)
|++. ++-+.++.
T Consensus 188 g~~a-~igGliLI 199 (206)
T TIGR02840 188 GKFS-FLSGILLI 199 (206)
T ss_pred cchH-HHHHHHHH
Confidence 4443 33333333
No 328
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=24.26 E-value=1.9e+02 Score=18.94 Aligned_cols=6 Identities=17% Similarity=0.125 Sum_probs=2.1
Q ss_pred hhhhHH
Q 041627 9 GINTVM 14 (204)
Q Consensus 9 ~~~~~~ 14 (204)
|-..+.
T Consensus 40 GsfllG 45 (129)
T PRK14231 40 GCFLLA 45 (129)
T ss_pred HHHHHH
Confidence 333333
No 329
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.12 E-value=2.3e+02 Score=19.04 Aligned_cols=19 Identities=11% Similarity=0.211 Sum_probs=15.2
Q ss_pred HHHHHHHhhhhhccccchH
Q 041627 43 NAVGTIVGIYLIDHFGRKK 61 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~ 61 (204)
..+.+.+.|++.+|..+++
T Consensus 66 f~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 66 FPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHhccccc
Confidence 5777888899999987764
No 330
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=24.02 E-value=5e+02 Score=22.86 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhccc
Q 041627 33 LLPSLVVAGTNAVGTIVGIYLIDHF 57 (204)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~g~l~dr~ 57 (204)
.+.+....+.+.++.++.-.+.||.
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455566666788899999999996
No 331
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=23.83 E-value=22 Score=27.02 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=3.3
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHH
Q 041627 82 ISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQN 136 (204)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 136 (204)
+..++..++.++.++-..+....+..+..++++|..+-.+....-..|-..|..+
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------------HHHH---------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566666666677888888999988888777666666555555544443
No 332
>PF06939 DUF1286: Protein of unknown function (DUF1286); InterPro: IPR009705 This entry is represented by Sulfolobus virus STSV1, Orf8. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical archaeal proteins of around 120 residues in length. All members of this family seem to be Sulfolobus species specific. The function of this family is unknown.
Probab=23.36 E-value=1.7e+02 Score=18.67 Aligned_cols=18 Identities=33% Similarity=0.630 Sum_probs=13.8
Q ss_pred HHHHHHHhhhhhccccch
Q 041627 43 NAVGTIVGIYLIDHFGRK 60 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr 60 (204)
+.+-+.++-.+.||+|.|
T Consensus 32 s~iiSvl~N~lID~lGH~ 49 (114)
T PF06939_consen 32 SGIISVLGNTLIDRLGHK 49 (114)
T ss_pred HHHHHHHHHHHHHhcccH
Confidence 556777788899999863
No 333
>PF08080 zf-RNPHF: RNPHF zinc finger; InterPro: IPR012996 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc-binding domain (CHHC motif) in RNP H and F. The domain is often associated with IPR000504 from INTERPRO. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1WEZ_A 2KG1_A.
Probab=23.24 E-value=27 Score=16.91 Aligned_cols=8 Identities=50% Similarity=0.841 Sum_probs=0.0
Q ss_pred hccccchH
Q 041627 54 IDHFGRKK 61 (204)
Q Consensus 54 ~dr~grr~ 61 (204)
+||+||-.
T Consensus 3 sd~FGRd~ 10 (36)
T PF08080_consen 3 SDRFGRDL 10 (36)
T ss_dssp --------
T ss_pred cchhcchh
Confidence 46666643
No 334
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=22.64 E-value=3e+02 Score=22.19 Aligned_cols=31 Identities=0% Similarity=-0.297 Sum_probs=14.1
Q ss_pred cccccCCcchhhhhhHHHHHHHHHHHHHHHH
Q 041627 106 NSEVYREQYRGICGGMSATVNWISNLIVAQN 136 (204)
Q Consensus 106 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 136 (204)
+.+..+-++---+..+....+..|.+..+..
T Consensus 300 l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 330 (403)
T TIGR00836 300 LKKKLKIDDPLDAFAVHGVGGIWGLIATGLF 330 (403)
T ss_pred HHHHcCCCCCcccchhhhhhHHHHHHHHHHh
Confidence 3344443333335555555554454444433
No 335
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.42 E-value=65 Score=23.58 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=16.6
Q ss_pred ccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHH
Q 041627 100 PVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQ 135 (204)
Q Consensus 100 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 135 (204)
+.+..-+.+.+| +......++....+.+.+..+-+
T Consensus 190 aAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y 224 (241)
T PF11299_consen 190 AAASGALAAAYP-EMADQILAFAAASNLLTSVTGLY 224 (241)
T ss_pred HHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556665 34444555554444444444333
No 336
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=22.27 E-value=4.2e+02 Score=21.34 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=54.4
Q ss_pred cCCCchhhhhhHHHHHHHHHHHHHHHhhhhhccccchHhHH----HhhHHHHHHHHHH-HHHH------HHHHHHHHHHH
Q 041627 24 AGFQSNQLALLPSLVVAGTNAVGTIVGIYLIDHFGRKKLAL----SSLAGVIISLVLL-SWAF------ISVIGLALYIT 92 (204)
Q Consensus 24 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~----~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 92 (204)
.|-..-+.+.+++.+... ..+|+...-++.|.--.-+-.. .+++.-.-..... .+.. +.+......+|
T Consensus 38 lG~~Ilq~S~Iia~yl~a-mGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG 116 (508)
T COG4262 38 LGGGILQTSLIIAGYLAA-MGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIG 116 (508)
T ss_pred cCCceeehHHHHHHHHHH-hchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 355555656666766666 6778888877776532222111 1111111111111 1211 34444555666
Q ss_pred HhcccccccchhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041627 93 FFAPGMGPVPWTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTV 140 (204)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 140 (204)
...+.-.|....+...-. ++-....+.....-.+|+..++...+++
T Consensus 117 ~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHH
Confidence 666666666666555411 1111122233333556666666666553
No 337
>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.
Probab=22.20 E-value=3.1e+02 Score=19.85 Aligned_cols=40 Identities=10% Similarity=-0.098 Sum_probs=22.7
Q ss_pred hhhcccccCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041627 103 WTVNSEVYREQYRGICGGMSATVNWISNLIVAQNFLTVAD 142 (204)
Q Consensus 103 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (204)
.+.+.+-.|+++|.++.-+......+.-.+.-....++.+
T Consensus 15 ia~~~~~LP~~~r~~al~~Gi~gAivlR~i~i~~~~~Ll~ 54 (215)
T TIGR03716 15 LAVMVKHLPEKQRKKALFYGLIGAYVFRFIALFLASFLIK 54 (215)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556788887777665555444444444444444544
No 338
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=22.17 E-value=3.7e+02 Score=20.72 Aligned_cols=92 Identities=8% Similarity=-0.067 Sum_probs=49.7
Q ss_pred HHHHHHHhhhhhccccchHh-----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhcccccCCcchhh
Q 041627 43 NAVGTIVGIYLIDHFGRKKL-----ALSSLAGVIISLVLLSWAFISVIGLALYITFFAPGMGPVPWTVNSEVYREQYRGI 117 (204)
Q Consensus 43 ~~~~~~~~g~l~dr~grr~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 117 (204)
-.+..-+++.++||-|.-.+ ++.+....... ..... -....++.+...+...+....+.+.....++--+
T Consensus 20 PLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~----~~~t~-spw~gl~~a~l~g~l~~ll~a~~ti~l~~nqiis 94 (304)
T COG1079 20 PLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALF----AYGTG-SPWLGLLAAALVGALFGLLHAFLTIKLRANQIIS 94 (304)
T ss_pred HHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHH----HHccc-cHHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Confidence 45556677888999887654 33332222211 11111 1111222233333444455667777777777777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q 041627 118 CGGMSATVNWISNLIVAQNFLT 139 (204)
Q Consensus 118 ~~~~~~~~~~~g~~~~~~~~~~ 139 (204)
+.++......+..+++....+.
T Consensus 95 G~alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 95 GLALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 7777777666666666666554
No 339
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=21.45 E-value=2.1e+02 Score=17.62 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhhhhcc-ccchHhHHHhhHHHHHHHHH
Q 041627 41 GTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVL 76 (204)
Q Consensus 41 ~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~ 76 (204)
..+.+.-+..|...|| +|.|..+....+...+..++
T Consensus 25 l~~~~~l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl~ 61 (99)
T PF08551_consen 25 LFSLLTLFYGGRYLEPIWGSREFLKFILVVNVITNLL 61 (99)
T ss_pred HHHHHHHHHhhHHHHHhcChHHHHHHHHHHHHHhHHH
Confidence 3356666677877776 79888776655555544433
No 340
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=20.97 E-value=3.6e+02 Score=23.39 Aligned_cols=31 Identities=16% Similarity=0.016 Sum_probs=24.2
Q ss_pred cccCCcchhhhhhHHHHHHHHHHHHHHHHHH
Q 041627 108 EVYREQYRGICGGMSATVNWISNLIVAQNFL 138 (204)
Q Consensus 108 e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 138 (204)
+-.|++.|..+.++......+|..+...+..
T Consensus 592 ~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 592 SQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899988888888888888887776664
No 341
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=20.94 E-value=1.7e+02 Score=16.22 Aligned_cols=18 Identities=6% Similarity=0.145 Sum_probs=10.6
Q ss_pred CcchhhhHHHHHHHHHHH
Q 041627 145 GTGSTFLILAGIAVLAVV 162 (204)
Q Consensus 145 ~~~~~~~~~~~~~~i~~~ 162 (204)
+|+...++.+.+.++++.
T Consensus 4 g~r~~~~~ggfVg~iG~a 21 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAA 21 (58)
T ss_pred cccchhhHHHHHHHHHHH
Confidence 566666666666555543
No 342
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.26 E-value=1.5e+02 Score=15.47 Aligned_cols=12 Identities=17% Similarity=0.058 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHH
Q 041627 128 ISNLIVAQNFLT 139 (204)
Q Consensus 128 ~g~~~~~~~~~~ 139 (204)
+|++++..+.+.
T Consensus 6 iGa~vGg~l~~~ 17 (48)
T PF04226_consen 6 IGAFVGGWLFGL 17 (48)
T ss_pred HHHHHHHHHHHH
Confidence 344555554443
Done!