Query 041629
Match_columns 362
No_of_seqs 257 out of 608
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 09:08:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02893 Cellulose synthase-li 100.0 2.5E-90 5.4E-95 725.7 31.9 271 84-355 457-729 (734)
2 PF03552 Cellulose_synt: Cellu 100.0 7.9E-91 1.7E-95 725.2 23.2 274 82-360 432-709 (720)
3 PLN02195 cellulose synthase A 100.0 1.8E-88 3.9E-93 722.0 30.8 270 84-360 684-958 (977)
4 PLN02400 cellulose synthase 100.0 1.3E-88 2.9E-93 728.3 29.9 272 83-360 792-1067(1085)
5 PLN02638 cellulose synthase A 100.0 1.7E-88 3.7E-93 727.1 30.0 272 83-360 787-1062(1079)
6 PLN02189 cellulose synthase 100.0 3.1E-88 6.7E-93 723.3 31.4 271 83-360 748-1023(1040)
7 PLN02436 cellulose synthase A 100.0 5.8E-88 1.3E-92 721.1 29.8 270 84-360 804-1077(1094)
8 PLN02190 cellulose synthase-li 100.0 1.1E-86 2.3E-91 695.8 29.1 267 83-355 469-755 (756)
9 PLN02915 cellulose synthase A 100.0 1.3E-85 2.9E-90 703.3 31.4 272 84-360 752-1027(1044)
10 PLN02248 cellulose synthase-li 100.0 4.1E-84 9E-89 693.2 30.5 272 83-360 846-1121(1135)
11 PRK11498 bcsA cellulose syntha 100.0 5.9E-38 1.3E-42 338.1 25.8 243 73-338 442-687 (852)
12 TIGR03030 CelA cellulose synth 100.0 1.6E-36 3.4E-41 324.9 27.8 242 74-339 332-575 (713)
13 PRK05454 glucosyltransferase M 98.8 7.8E-09 1.7E-13 111.2 9.4 92 73-170 329-422 (691)
14 TIGR03111 glyc2_xrt_Gpos1 puta 98.8 3.6E-08 7.8E-13 100.7 10.8 113 61-176 218-341 (439)
15 PRK14583 hmsR N-glycosyltransf 98.6 3E-07 6.6E-12 94.0 12.8 104 63-173 235-348 (444)
16 COG1215 Glycosyltransferases, 98.6 1.1E-07 2.4E-12 95.3 7.9 71 55-126 211-290 (439)
17 PRK11204 N-glycosyltransferase 98.5 3.1E-07 6.8E-12 92.4 9.0 101 63-170 214-324 (420)
18 cd04191 Glucan_BSP_ModH Glucan 98.2 7E-07 1.5E-11 85.2 2.3 50 72-122 203-253 (254)
19 PRK14716 bacteriophage N4 adso 97.9 6.8E-05 1.5E-09 78.4 11.6 77 72-150 261-355 (504)
20 PF13632 Glyco_trans_2_3: Glyc 97.7 7.5E-05 1.6E-09 66.6 5.9 58 62-120 76-143 (193)
21 cd04190 Chitin_synth_C C-termi 97.6 2.8E-05 6.1E-10 72.9 2.7 52 71-122 191-243 (244)
22 PRK11234 nfrB bacteriophage N4 97.6 0.00018 3.9E-09 78.3 8.7 56 70-125 256-334 (727)
23 cd06435 CESA_NdvC_like NdvC_li 97.3 0.00013 2.8E-09 66.8 2.7 64 63-128 163-235 (236)
24 cd06427 CESA_like_2 CESA_like_ 97.3 0.0002 4.2E-09 66.5 3.4 61 63-125 166-235 (241)
25 cd06437 CESA_CaSu_A2 Cellulose 97.2 0.00021 4.7E-09 65.5 3.1 56 63-119 167-231 (232)
26 cd06421 CESA_CelA_like CESA_Ce 97.2 0.00018 3.9E-09 65.3 1.9 63 61-124 163-234 (234)
27 PF13641 Glyco_tranf_2_3: Glyc 96.8 0.00062 1.3E-08 61.9 1.9 58 61-119 162-228 (228)
28 PF03142 Chitin_synth_2: Chiti 95.9 0.034 7.3E-07 58.6 9.2 43 78-121 333-375 (527)
29 cd04192 GT_2_like_e Subfamily 95.6 0.0054 1.2E-07 55.1 1.3 57 63-119 160-229 (229)
30 cd06434 GT2_HAS Hyaluronan syn 95.4 0.0066 1.4E-07 55.2 1.4 40 81-121 194-233 (235)
31 cd02520 Glucosylceramide_synth 93.9 0.042 9.2E-07 49.2 2.6 56 62-118 128-194 (196)
32 KOG2571 Chitin synthase/hyalur 93.5 0.28 6.1E-06 54.3 8.5 39 80-119 558-596 (862)
33 cd06439 CESA_like_1 CESA_like_ 93.4 0.046 1E-06 50.4 2.1 49 73-122 202-250 (251)
34 COG2943 MdoH Membrane glycosyl 93.1 0.17 3.6E-06 53.3 5.8 74 82-162 358-434 (736)
35 TIGR03472 HpnI hopanoid biosyn 92.6 0.083 1.8E-06 52.9 2.7 58 64-122 206-274 (373)
36 cd04190 Chitin_synth_C C-termi 90.7 0.22 4.7E-06 46.6 3.1 37 28-64 5-49 (244)
37 cd02525 Succinoglycan_BP_ExoA 89.9 0.33 7.2E-06 44.0 3.6 66 62-129 160-235 (249)
38 PF13506 Glyco_transf_21: Glyc 89.3 0.35 7.6E-06 43.5 3.2 54 64-118 107-175 (175)
39 PRK15489 nfrB bacteriophage N4 87.1 0.4 8.6E-06 52.5 2.5 52 73-124 267-341 (703)
40 COG1215 Glycosyltransferases, 83.4 2 4.3E-05 43.0 5.4 48 25-74 59-106 (439)
41 cd06421 CESA_CelA_like CESA_Ce 80.9 3 6.5E-05 37.5 5.1 36 29-64 10-45 (234)
42 TIGR03111 glyc2_xrt_Gpos1 puta 71.6 6.8 0.00015 40.2 5.3 43 29-72 58-100 (439)
43 cd04192 GT_2_like_e Subfamily 67.9 9.3 0.0002 33.9 4.8 39 33-71 9-47 (229)
44 TIGR03469 HonB hopene-associat 63.4 45 0.00097 33.4 9.2 58 61-118 212-280 (384)
45 cd06427 CESA_like_2 CESA_like_ 55.1 20 0.00043 32.9 4.7 41 29-70 10-50 (241)
46 cd06439 CESA_like_1 CESA_like_ 53.7 25 0.00055 32.0 5.2 38 34-71 42-79 (251)
47 cd04196 GT_2_like_d Subfamily 52.0 26 0.00056 30.6 4.8 41 29-72 7-47 (214)
48 PRK14583 hmsR N-glycosyltransf 50.5 24 0.00052 36.1 4.9 42 28-72 83-124 (444)
49 cd06438 EpsO_like EpsO protein 45.2 35 0.00075 29.8 4.4 35 29-64 6-40 (183)
50 PRK11204 N-glycosyltransferase 44.3 41 0.0009 33.7 5.4 42 28-72 62-103 (420)
51 cd06435 CESA_NdvC_like NdvC_li 44.0 31 0.00066 31.1 4.0 35 29-65 7-41 (236)
52 cd04191 Glucan_BSP_ModH Glucan 40.7 40 0.00086 32.1 4.4 35 29-64 8-46 (254)
53 PF06570 DUF1129: Protein of u 40.0 1.6E+02 0.0035 27.0 8.2 26 274-299 80-105 (206)
54 cd06437 CESA_CaSu_A2 Cellulose 37.9 70 0.0015 28.8 5.4 42 29-72 10-51 (232)
55 TIGR03472 HpnI hopanoid biosyn 33.1 82 0.0018 31.4 5.4 40 29-71 50-89 (373)
56 PF15050 SCIMP: SCIMP protein 32.9 50 0.0011 28.5 3.2 39 211-250 2-45 (133)
57 PHA00726 hypothetical protein 31.9 86 0.0019 25.4 4.2 39 318-356 15-62 (89)
58 cd04186 GT_2_like_c Subfamily 31.1 87 0.0019 25.8 4.6 38 33-72 9-46 (166)
59 PRK05454 glucosyltransferase M 29.6 1.3E+02 0.0029 33.1 6.7 37 27-64 131-171 (691)
60 PF07557 Shugoshin_C: Shugoshi 29.5 32 0.0007 21.7 1.2 19 17-36 3-21 (26)
61 COG2028 Uncharacterized conser 28.8 19 0.0004 31.1 -0.0 19 101-119 80-98 (145)
62 cd02522 GT_2_like_a GT_2_like_ 28.6 79 0.0017 27.9 4.1 40 29-71 8-47 (221)
63 COG4858 Uncharacterized membra 27.5 3.5E+02 0.0075 25.4 7.9 57 280-338 101-160 (226)
64 cd02525 Succinoglycan_BP_ExoA 27.3 1.3E+02 0.0027 26.9 5.2 37 29-66 9-45 (249)
65 TIGR03469 HonB hopene-associat 25.2 1.4E+02 0.003 29.9 5.5 37 34-71 53-89 (384)
66 cd06433 GT_2_WfgS_like WfgS an 25.0 1.5E+02 0.0031 25.2 5.0 38 29-69 7-44 (202)
67 PF06638 Strabismus: Strabismu 24.9 1.3E+02 0.0029 31.8 5.3 36 317-352 141-176 (505)
68 cd06423 CESA_like CESA_like is 24.5 1.5E+02 0.0033 23.9 4.8 40 29-71 6-45 (180)
69 PF02012 BNR: BNR/Asp-box repe 24.4 45 0.00097 17.3 0.9 8 56-63 1-8 (12)
70 cd02520 Glucosylceramide_synth 23.8 1.5E+02 0.0032 26.1 4.9 38 30-70 11-48 (196)
71 cd04184 GT2_RfbC_Mx_like Myxoc 22.7 1.7E+02 0.0037 25.3 5.0 34 29-64 10-43 (202)
72 KOG1314 DHHC-type Zn-finger pr 22.6 2.8E+02 0.006 28.4 6.8 59 277-337 17-77 (414)
73 cd06913 beta3GnTL1_like Beta 1 21.9 1.7E+02 0.0038 25.9 5.0 38 33-71 9-46 (219)
74 cd06434 GT2_HAS Hyaluronan syn 20.6 1.5E+02 0.0033 26.4 4.4 39 28-70 8-46 (235)
75 PF13641 Glyco_tranf_2_3: Glyc 20.2 41 0.00089 30.0 0.5 37 29-68 10-46 (228)
No 1
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.5e-90 Score=725.74 Aligned_cols=271 Identities=63% Similarity=1.180 Sum_probs=258.5
Q ss_pred cCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhhcchhHHHHHH
Q 041629 84 CRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFWPIWSIPIMVY 161 (362)
Q Consensus 84 ~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y~~~~l~~liy 161 (362)
||||||+|++| +++|.|+||+|+.++++||+|||+|++||+++|+||+++|.+||++ |||+|++.++||++++|+++|
T Consensus 457 ~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY 536 (734)
T PLN02893 457 CEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIY 536 (734)
T ss_pred hcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHH
Confidence 44588889887 6788999999999999999999999999999999999987789999 999999999999999999999
Q ss_pred HHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHhcc
Q 041629 162 AFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSLGI 241 (362)
Q Consensus 162 ll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l~~ 241 (362)
+++|++||++|++++|+++++++++|++++++.+.++++|++|+|+++++||||||+|+|.++++|+++++++++|++|+
T Consensus 537 ~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~ 616 (734)
T PLN02893 537 AFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGI 616 (734)
T ss_pred HHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCchHHHHHHHHHHHHHHH
Q 041629 242 SAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDDNEGLPLQMLLAGFIMLNCW 321 (362)
Q Consensus 242 ~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~~~~~~~~~~~~~~~~~wvv~~l~ 321 (362)
++.+|+||+|+.++|++++|++|+|+|+|+|++++|+++++++|++|+++|+.|++.+. .++++++|+++++|++++++
T Consensus 617 s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~-~~~~~~~~~~~~~~~v~~~~ 695 (734)
T PLN02893 617 STFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQR-NLEGLFLQMFLAGFAVVNCW 695 (734)
T ss_pred cCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHH
Confidence 99999999999888888899999999998899999999999999999999999998764 67888999999999999999
Q ss_pred HHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhh
Q 041629 322 PVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAA 355 (362)
Q Consensus 322 p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~ 355 (362)
|+++||++||||||||.+|++||++||+++|.+.
T Consensus 696 P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~ 729 (734)
T PLN02893 696 PIYEAMVLRTDDGKLPVKITLISIVLAWALYLAS 729 (734)
T ss_pred HHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888764
No 2
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=7.9e-91 Score=725.17 Aligned_cols=274 Identities=36% Similarity=0.662 Sum_probs=259.7
Q ss_pred cccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCccccc-ccCCCc-hhhhhhhhhhhcchhHHH
Q 041629 82 PFCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFG-IRTMGL-MGLAYAHYSFWPIWSIPI 158 (362)
Q Consensus 82 ~~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g-~~gL~l-QRL~Y~~~~~y~~~~l~~ 158 (362)
+|||||||+||+| +++|.|+||+|+.+.|.|++|||+|++|||+||+||+++| .++|++ |||+|++.++|+++|+|.
T Consensus 432 mH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipl 511 (720)
T PF03552_consen 432 MHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPL 511 (720)
T ss_pred EeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHH
Confidence 8999999999999 7899999999999999999999999999999999999987 589999 999999999999999999
Q ss_pred HHHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHH
Q 041629 159 MVYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKS 238 (362)
Q Consensus 159 liyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~ 238 (362)
+||+++|++||++|++++|+++++++++|+++++++++++++|++|+|.++++||||||||+|.++++|++|++++++|+
T Consensus 512 l~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~ 591 (720)
T PF03552_consen 512 LCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKV 591 (720)
T ss_pred HHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHH
Q 041629 239 LGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIM 317 (362)
Q Consensus 239 l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv 317 (362)
+|+++.+|+||+|+.++++++ + .|.|+|+| |++++|.++++++|++|+++|+.|.+. +..+|+++++++++++|++
T Consensus 592 lg~s~t~F~VTsK~~dde~~~-~-~ely~f~w-S~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVv 668 (720)
T PF03552_consen 592 LGGSETSFTVTSKVSDDEDDK-Y-AELYIFKW-SPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVV 668 (720)
T ss_pred HcCCccceeeccccccccccc-c-cccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHH
Confidence 999999999999998855433 3 47899998 789999999999999999999999875 4467899999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 318 LNCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 318 ~~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
+|+|||++||++||| |+|++|++||+++|+++|++|++|+-
T Consensus 669 v~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i~~ 709 (720)
T PF03552_consen 669 VHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRIDP 709 (720)
T ss_pred HHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheeccc
Confidence 999999999999976 59999999999999999999999973
No 3
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.8e-88 Score=721.95 Aligned_cols=270 Identities=26% Similarity=0.476 Sum_probs=252.8
Q ss_pred cCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccc--cCCCc-hhhhhhhhhhhcchhHHHH
Q 041629 84 CRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGI--RTMGL-MGLAYAHYSFWPIWSIPIM 159 (362)
Q Consensus 84 ~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~--~gL~l-QRL~Y~~~~~y~~~~l~~l 159 (362)
||||||+|++| +++|.|+||+|+.+++.||+|||+|++|||++|+||+++|. +||++ |||+|+++++||+++++++
T Consensus 684 ~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~l 763 (977)
T PLN02195 684 CRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLI 763 (977)
T ss_pred ccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45788888887 57899999999999999999999999999999999999763 78999 9999999999999999999
Q ss_pred HHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHh
Q 041629 160 VYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSL 239 (362)
Q Consensus 160 iyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l 239 (362)
+|+++|++||++|++++|+++++++++|+++++++++++++|++|+|+++++||||||||+|.++++|++|++++++|++
T Consensus 764 iY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvL 843 (977)
T PLN02195 764 AYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKML 843 (977)
T ss_pred HHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHHH
Q 041629 240 GISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIML 318 (362)
Q Consensus 240 ~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv~ 318 (362)
|+++.+|+||+|..+++. ..|+|+|+| |++++|.++++++|++|+++|+.+++. +..+++.+++++++++|+++
T Consensus 844 ggs~~~F~VTsK~~dd~~----~~~~Y~f~~-S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~ 918 (977)
T PLN02195 844 AGLDTNFTVTAKAADDTE----FGELYMVKW-TTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 918 (977)
T ss_pred cCCCccceeccccccccc----hhcceeccc-eehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHH
Confidence 999999999999876532 247889997 889999999999999999999999885 43578999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 319 NCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 319 ~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
|+|||++||++|| +|+|++|++||++++++++++|++|+.
T Consensus 919 ~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~~ 958 (977)
T PLN02195 919 HLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLVWVKINP 958 (977)
T ss_pred HHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHeeccc
Confidence 9999999999997 579999999999999999999999974
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.3e-88 Score=728.28 Aligned_cols=272 Identities=27% Similarity=0.479 Sum_probs=255.6
Q ss_pred ccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCccccc-ccCCCc-hhhhhhhhhhhcchhHHHH
Q 041629 83 FCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFG-IRTMGL-MGLAYAHYSFWPIWSIPIM 159 (362)
Q Consensus 83 ~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g-~~gL~l-QRL~Y~~~~~y~~~~l~~l 159 (362)
|||||||+|++| +++|.|+||+|+.++++||+|||+|++|||++|+||+++| .+||++ |||+|+++++||+++++++
T Consensus 792 H~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~l 871 (1085)
T PLN02400 792 HARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLL 871 (1085)
T ss_pred HccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999987 6799999999999999999999999999999999999986 489999 9999999999999999999
Q ss_pred HHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHh
Q 041629 160 VYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSL 239 (362)
Q Consensus 160 iyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l 239 (362)
+|+++|++||++|++++|.++++++++|+++++++++++++|++|+|+++++||||||||+|.++++|++|++++++|++
T Consensus 872 iY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvL 951 (1085)
T PLN02400 872 AYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVL 951 (1085)
T ss_pred HHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHHH
Q 041629 240 GISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIML 318 (362)
Q Consensus 240 ~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv~ 318 (362)
|+++.+|+||+|..+++. . .+|+|+|+| |++++|+++++++|++|+++|+.+++. +..+++.+++++++++|+++
T Consensus 952 gg~~~~F~VTsK~~d~~~--~-~~ely~f~~-s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv 1027 (1085)
T PLN02400 952 AGIDTNFTVTSKASDEDG--D-FAELYVFKW-TSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIA 1027 (1085)
T ss_pred cCCcccceecCCcccccc--c-ccceeeecc-cchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHH
Confidence 999999999999886533 2 368999997 789999999999999999999999885 44678999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 319 NCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 319 ~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
|+|||++|||+|+ +|+|++|++||+++|++++++|++|+.
T Consensus 1028 ~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~~v~~~~ 1067 (1085)
T PLN02400 1028 HLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLLWVRIDP 1067 (1085)
T ss_pred HHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHHheeccc
Confidence 9999999999886 789999999999999999999999985
No 5
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.7e-88 Score=727.10 Aligned_cols=272 Identities=27% Similarity=0.497 Sum_probs=255.4
Q ss_pred ccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCccccc-ccCCCc-hhhhhhhhhhhcchhHHHH
Q 041629 83 FCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFG-IRTMGL-MGLAYAHYSFWPIWSIPIM 159 (362)
Q Consensus 83 ~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g-~~gL~l-QRL~Y~~~~~y~~~~l~~l 159 (362)
|||||||+|++| +++|.|+||+|+.+++.||+|||+|++|||++|+||+++| .+||++ |||+|+++++||+++++++
T Consensus 787 H~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~l 866 (1079)
T PLN02638 787 HARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLL 866 (1079)
T ss_pred HcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356788899988 7789999999999999999999999999999999999986 379999 9999999999999999999
Q ss_pred HHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHh
Q 041629 160 VYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSL 239 (362)
Q Consensus 160 iyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l 239 (362)
+|+++|++||++|++++|+++++++++|+++++++++++++|++|+|+++++||||||||+|.++++|++|++++++|++
T Consensus 867 iY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~L 946 (1079)
T PLN02638 867 LYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVL 946 (1079)
T ss_pred HHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHHH
Q 041629 240 GISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIML 318 (362)
Q Consensus 240 ~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv~ 318 (362)
|+++.+|+||+|..+++.+ .+|+|+|+| |++++|.++++++|++|+++|+.+++. +..+++.+++++++++|+++
T Consensus 947 ggs~~~F~VTsK~~d~~~~---~~ely~f~w-S~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~ 1022 (1079)
T PLN02638 947 AGIDTNFTVTSKASDEDGD---FAELYMFKW-TTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIV 1022 (1079)
T ss_pred ccCcccceecccccccccc---ccceeEecc-eehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHH
Confidence 9999999999998865432 368999997 889999999999999999999999885 44578999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 319 NCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 319 ~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
|+|||++||++|| +|+|++|++||++++++++++|++|+.
T Consensus 1023 ~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~~ 1062 (1079)
T PLN02638 1023 HLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLLWVRIDP 1062 (1079)
T ss_pred HHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHheecc
Confidence 9999999999997 579999999999999999999999985
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=3.1e-88 Score=723.32 Aligned_cols=271 Identities=27% Similarity=0.517 Sum_probs=255.0
Q ss_pred ccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccc--cCCCc-hhhhhhhhhhhcchhHHH
Q 041629 83 FCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGI--RTMGL-MGLAYAHYSFWPIWSIPI 158 (362)
Q Consensus 83 ~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~--~gL~l-QRL~Y~~~~~y~~~~l~~ 158 (362)
|||||||+|++| +++|.|+||+|+.+++.||+|||+|++|||++|+||+++|. ++|++ |||+|+++++||++++|+
T Consensus 748 H~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~ 827 (1040)
T PLN02189 748 HCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPL 827 (1040)
T ss_pred HccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456799999987 78999999999999999999999999999999999999763 67999 999999999999999999
Q ss_pred HHHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHH
Q 041629 159 MVYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKS 238 (362)
Q Consensus 159 liyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~ 238 (362)
++|+++|++||++|++++|.++++++++|+++++++++++++|++|+|.++++||||||||+|.++++|++|++++++|+
T Consensus 828 liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKv 907 (1040)
T PLN02189 828 LAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKV 907 (1040)
T ss_pred HHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHH
Q 041629 239 LGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIM 317 (362)
Q Consensus 239 l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv 317 (362)
+|+++.+|+||+|..+++.. +|+|+|+| |++++|.++++++|++|+++|+.+++. +...++.+++++++++|++
T Consensus 908 lggs~~~F~VTsK~~~d~~~----~~ly~f~~-s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv 982 (1040)
T PLN02189 908 LAGIDTNFTVTSKATDDDEF----GELYAFKW-TTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVI 982 (1040)
T ss_pred hccCcccceecccccccccc----ccceeecc-eeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHH
Confidence 99999999999998765432 58999997 889999999999999999999999885 4357899999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 318 LNCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 318 ~~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
+|+|||++||++|| +|+|++|++||++++++++++|++|+.
T Consensus 983 ~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~~ 1023 (1040)
T PLN02189 983 VHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSLLWVRIDP 1023 (1040)
T ss_pred HHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHheecc
Confidence 99999999999997 579999999999999999999999974
No 7
>PLN02436 cellulose synthase A
Probab=100.00 E-value=5.8e-88 Score=721.07 Aligned_cols=270 Identities=27% Similarity=0.500 Sum_probs=251.8
Q ss_pred cCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccc-cCCCc-hhhhhhhhhhhcchhHHHHH
Q 041629 84 CRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGI-RTMGL-MGLAYAHYSFWPIWSIPIMV 160 (362)
Q Consensus 84 ~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~-~gL~l-QRL~Y~~~~~y~~~~l~~li 160 (362)
||||||+|++| +++|.|+||+|+.+++.||+|||+|++|||++|+||+++|. +||++ |||+|+++++||++++++++
T Consensus 804 ~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~li 883 (1094)
T PLN02436 804 CHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIV 883 (1094)
T ss_pred cCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55788899888 56899999999999999999999999999999999999763 68999 99999999999999999999
Q ss_pred HHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHhc
Q 041629 161 YAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSLG 240 (362)
Q Consensus 161 yll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l~ 240 (362)
|+++|++||++|++++|.++++++++|+++++++++++++|++|+|.++++||||||||+|.++++|++|++++++|++|
T Consensus 884 Y~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg 963 (1094)
T PLN02436 884 YCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLA 963 (1094)
T ss_pred HHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHHHH
Q 041629 241 ISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIMLN 319 (362)
Q Consensus 241 ~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv~~ 319 (362)
+++.+|+||+|+.+++. ..|+|+|+| |++++|+++++++|++|+++|+.+++. +..+++.+++++++++|+++|
T Consensus 964 gs~~~F~VTsK~~d~~~----~a~ly~f~~-S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~ 1038 (1094)
T PLN02436 964 GVNTNFTVTSKAADDGE----FSELYLFKW-TSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVH 1038 (1094)
T ss_pred cCcccceeccccccccc----ccceeeecc-eeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 99999999999876431 237889997 789999999999999999999999885 445789999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 320 CWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 320 l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
+|||++||| || ++|+|++|++||+++|++++++|++|+.
T Consensus 1039 lyPf~kgL~-gr-~~r~P~~v~v~s~lla~~~~l~~v~~~~ 1077 (1094)
T PLN02436 1039 LYPFLKGLL-GK-QDRMPTIILVWSILLASILTLLWVRVNP 1077 (1094)
T ss_pred HHHHHHHHh-cc-CCCCCeeehHHHHHHHHHHHHHHeeecc
Confidence 999999999 44 5589999999999999999999999984
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.1e-86 Score=695.83 Aligned_cols=267 Identities=23% Similarity=0.318 Sum_probs=246.0
Q ss_pred ccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCccccc-ccCCCc-hhhhhhhhhhhcchhHHHH
Q 041629 83 FCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFG-IRTMGL-MGLAYAHYSFWPIWSIPIM 159 (362)
Q Consensus 83 ~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g-~~gL~l-QRL~Y~~~~~y~~~~l~~l 159 (362)
|||||||+|+|| +++|.|+||+|+.++++||+|||+|++||+++|+||++++ .+||++ |||+|+++++ |++++|++
T Consensus 469 h~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l 547 (756)
T PLN02190 469 HSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPEL 547 (756)
T ss_pred HccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHH
Confidence 456888899987 7789999999999999999999999999999999999975 589999 9999999888 99999999
Q ss_pred HHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHh
Q 041629 160 VYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSL 239 (362)
Q Consensus 160 iyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l 239 (362)
+|+++|++||++|++++|+ .+++++++++++.+++++++|++|+|.++++||||||||+|.++++|++|++++++|++
T Consensus 548 ~Y~~lP~l~Ll~g~~i~P~--~~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~l 625 (756)
T PLN02190 548 IYCLLPAYCLLHNSALFPK--GVYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLL 625 (756)
T ss_pred HHHHHHHHHHHcCCccccC--ccHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHh
Confidence 9999999999999999997 47888999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeeccCCcc-------------chhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhcC----CCC
Q 041629 240 GISAFGFNVTSKVVD-------------DEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICG----SDD 302 (362)
Q Consensus 240 ~~~~~~F~VT~K~~~-------------~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~~----~~~ 302 (362)
|+++.+|+||+|+.+ +|++++|++|+|+|+| |++++|.++++++|++|++.|+++++.+ +..
T Consensus 626 g~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~-S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~ 704 (756)
T PLN02190 626 GISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFDG-SLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGG 704 (756)
T ss_pred ccccceEEEeeccccccccccccccccccccchhhhcceeEecc-eehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcc
Confidence 999999999999754 3445788999999997 8999999999999999999999887632 124
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhh
Q 041629 303 NEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAA 355 (362)
Q Consensus 303 ~~~~~~~~~~~~wvv~~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~ 355 (362)
++. ++|+++|+|+|+|+|||++||| ||||||||.|++++|++|+++|+++-
T Consensus 705 ~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 705 GSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 444 5999999999999999999998 99999999999999999999999863
No 9
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.3e-85 Score=703.26 Aligned_cols=272 Identities=26% Similarity=0.483 Sum_probs=251.5
Q ss_pred cCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCccccc-ccCCCc-hhhhhhhhhhhcchhHHHHH
Q 041629 84 CRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFG-IRTMGL-MGLAYAHYSFWPIWSIPIMV 160 (362)
Q Consensus 84 ~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g-~~gL~l-QRL~Y~~~~~y~~~~l~~li 160 (362)
||||||+|++| +++|.|+||+|+.++++||+|||+|++|||++|+||++++ .+||++ |||+|+++++||++++++++
T Consensus 752 ~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~li 831 (1044)
T PLN02915 752 CRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLA 831 (1044)
T ss_pred ccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899988 6889999999999999999999999999999999999975 379999 99999999999999999999
Q ss_pred HHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHhc
Q 041629 161 YAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSLG 240 (362)
Q Consensus 161 yll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l~ 240 (362)
|+++|++||++|++++|.++......+++++++.++++++|++|+|.++++|||+||||+|.++++|++|++++++|++|
T Consensus 832 Y~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg 911 (1044)
T PLN02915 832 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLG 911 (1044)
T ss_pred HHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999877766667778888999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhc-CCCCCCchHHHHHHHHHHHHH
Q 041629 241 ISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC-GSDDNEGLPLQMLLAGFIMLN 319 (362)
Q Consensus 241 ~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~-~~~~~~~~~~~~~~~~wvv~~ 319 (362)
+++.+|+||+|+.+++.++ + +|+|+|+| |++++|+++++++|++|+++|+++++. +...++.+++++++++|+++|
T Consensus 912 ~se~~F~VTsK~~d~~~d~-~-~ely~F~~-S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~ 988 (1044)
T PLN02915 912 GVDTNFTVTSKAADDEADE-F-GELYLFKW-TTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVH 988 (1044)
T ss_pred ccCCcceecCCccccchhh-h-ccceeecc-eehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 9999999999998654433 2 58999997 889999999999999999999999875 335788899999999999999
Q ss_pred HHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 320 CWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 320 l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
+|||++||++|+ +|+|++|++||+++|++++++|++|+.
T Consensus 989 lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~~~~ 1027 (1044)
T PLN02915 989 LYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVRIDP 1027 (1044)
T ss_pred HHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHheecc
Confidence 999999999997 569999999999999999999999974
No 10
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4.1e-84 Score=693.16 Aligned_cols=272 Identities=25% Similarity=0.431 Sum_probs=250.2
Q ss_pred ccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhhcchhHHHHH
Q 041629 83 FCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFWPIWSIPIMV 160 (362)
Q Consensus 83 ~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y~~~~l~~li 160 (362)
|||||||+|++| +++|.|+||+|+.++++||+|||+|++|||++|+||++++ +||++ |||+|+++++||++++++++
T Consensus 846 H~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lypf~Slp~li 924 (1135)
T PLN02248 846 HNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYPFTSIFLIV 924 (1135)
T ss_pred HhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777888775 6788999999999999999999999999999999999875 79999 99999999999999999999
Q ss_pred HHHHHHHHHhcCCccccCCChhHHHHHH-HHHHHHHHHHHHHHHHhCCccccccccchhhhhhHHHHHHHHHHHHHHHHh
Q 041629 161 YAFLPQLALASGISIFPKISEPGFLLYL-FLFLGAYGQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKSL 239 (362)
Q Consensus 161 yll~P~l~Ll~Gi~i~~~~s~~~f~~f~-~l~~~~~~~~lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a~~~~llk~l 239 (362)
|+++|++||++|++++|+. +++|++|+ .++++++.++++|++|+|.++++|||+||||+|.++++|++|++++++|++
T Consensus 925 Y~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvL 1003 (1135)
T PLN02248 925 YCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVI 1003 (1135)
T ss_pred HHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHh
Confidence 9999999999999999986 56677776 445788999999999999999999999999999999999999999999999
Q ss_pred ccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhcCC-CCCCchHHHHHHHHHHHH
Q 041629 240 GISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGS-DDNEGLPLQMLLAGFIML 318 (362)
Q Consensus 240 ~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~~~-~~~~~~~~~~~~~~wvv~ 318 (362)
++++.+|+||+|+.+++.+++| +|.|+|+| |++++|+++++++|++|+++|+.|++.+. ..++.+++++++++|+++
T Consensus 1004 ggs~~~F~VTsK~~~~d~~~~~-a~ly~f~w-S~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~ 1081 (1135)
T PLN02248 1004 AGIEISFTLTSKSAGDDEDDEF-ADLYIVKW-TSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLA 1081 (1135)
T ss_pred cCccccceeCCccccccccccc-chheecCc-chHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHH
Confidence 9999999999999987666677 69999997 88999999999999999999999998653 467789999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHHHhheeccc
Q 041629 319 NCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLYAAAFHISF 360 (362)
Q Consensus 319 ~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~~~~~~~~~ 360 (362)
|+|||++||++| |+|+|++|++||++++.+++++|++|+.
T Consensus 1082 ~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~~~~ 1121 (1135)
T PLN02248 1082 HLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVAISP 1121 (1135)
T ss_pred HHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheEecc
Confidence 999999999999 6679999999999999999999999984
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.9e-38 Score=338.15 Aligned_cols=243 Identities=15% Similarity=0.172 Sum_probs=179.7
Q ss_pred HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhh
Q 041629 73 AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFW 151 (362)
Q Consensus 73 ~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y 151 (362)
+||+.+.+.++.+||++.|.+ ++...|++||++.++++||.|||+|++|+++ ++||++. +||++ ||+||+++++|
T Consensus 442 tED~dlslRL~~~Gyrv~yl~-~~~a~glaPesl~~~~~QR~RWarG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~ 517 (852)
T PRK11498 442 TEDAHTSLRLHRRGYTSAYMR-IPQAAGLATESLSAHIGQRIRWARGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLH 517 (852)
T ss_pred CccHHHHHHHHHcCCEEEEEe-ccceeEECCCCHHHHHHHHHHHHHHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHH
Confidence 477778888999999999986 4566899999999999999999999999986 6899985 89999 99999999999
Q ss_pred cchhHHHHHHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHH-HHHHHHhCCccccccccchhhhhhHHHHHHHH
Q 041629 152 PIWSIPIMVYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQD-CLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFG 230 (362)
Q Consensus 152 ~~~~l~~liyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~-lle~~~~g~s~~~wwr~qr~w~i~~~~~~l~a 230 (362)
|+.++++++|+++|++|+++|+.++.+ +...+++|+ ++++... +.+....|.....||++ .+.++.++..+
T Consensus 518 ~l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~i~~y~-lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~ 589 (852)
T PRK11498 518 FLSGIPRLIFLTAPLAFLLLHAYIIYA---PALMIALFV-LPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIA 589 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChheeC---ChHHHHHHH-HHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHH
Confidence 999999999999999999999998865 222223333 2322222 23333344433344443 34555666644
Q ss_pred HHHHHHHHhccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhcCC-CCCCchHHH
Q 041629 231 TLEYLLKSLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGS-DDNEGLPLQ 309 (362)
Q Consensus 231 ~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~~~-~~~~~~~~~ 309 (362)
..++..++++++.+|+||+||++.+ ++.|+| .+..|+++++++|++|+++|++|+..+. .+.+....+
T Consensus 590 -~~~~~~ll~p~~~~F~VTpKg~~~~------~~~~~~----~~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~ 658 (852)
T PRK11498 590 -PPTTVALFNPHKGKFNVTAKGGLVE------EEYVDW----VISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVS 658 (852)
T ss_pred -HHHHHHHcCccCCCcccCCCCcccc------ccceeh----HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhh
Confidence 4555568999999999999987532 234444 4788999999999999999999987543 222345566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCch
Q 041629 310 MLLAGFIMLNCWPVYEAMVLRTDKGKMPT 338 (362)
Q Consensus 310 ~~~~~wvv~~l~p~~~al~~rk~k~~iP~ 338 (362)
++|+.++++.+...+.+.++++++++.|+
T Consensus 659 ~~W~~~nl~~l~~a~~~~~e~~~~r~~~r 687 (852)
T PRK11498 659 LVWVFYNLIILGGAVAVSVESKQVRRSHR 687 (852)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 66666666666666666676666555554
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.6e-36 Score=324.89 Aligned_cols=242 Identities=15% Similarity=0.176 Sum_probs=189.3
Q ss_pred HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhhc
Q 041629 74 AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFWP 152 (362)
Q Consensus 74 ~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y~ 152 (362)
||+.+...+|++||+++|.+ ++...|++|+|++++++||.||++|++|+++ .+||++. +||++ ||++|+++++||
T Consensus 332 ED~~l~~rL~~~G~~~~y~~-~~~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~-~~~pl~~--~gl~~~qrl~y~~~~~~~ 407 (713)
T TIGR03030 332 EDAETALKLHRRGWNSAYLD-RPLIAGLAPETLSGHIGQRIRWAQGMMQIFR-LDNPLLK--RGLSFPQRLCYLNAMLFW 407 (713)
T ss_pred cHHHHHHHHHHcCCeEEEec-cccccccCCCCHHHHHHHHHHHhcChHHHHh-hhCcccc--CCCCHHHHHHHHHHHHHH
Confidence 44555555899999999987 4667899999999999999999999999987 5699985 89999 999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCccccCCChhHHHHHHHHHHHHHHHHHHHHH-HhCCccccccccchhhhhhHHHHHHHHH
Q 041629 153 IWSIPIMVYAFLPQLALASGISIFPKISEPGFLLYLFLFLGAYGQDCLDFL-LEGGTFRKWWNDQRIWLIRGLSCHLFGT 231 (362)
Q Consensus 153 ~~~l~~liyll~P~l~Ll~Gi~i~~~~s~~~f~~f~~l~~~~~~~~lle~~-~~g~s~~~wwr~qr~w~i~~~~~~l~a~ 231 (362)
++++++++|+++|++|+++|++++++. ...+.. | ++++++.+.+++. ..|.....||++ .+..+.+ ++.+
T Consensus 408 ~~~~~~~~~~~~P~~~l~~~~~~~~~~-~~~~~~--~-~lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~ 478 (713)
T TIGR03030 408 FFPLPRVIFLTAPLAYLFFGLNIFVAS-ALEILA--Y-ALPHMLHSLLTNSYLFGRVRWPFWSE----VYETVLA-VYLL 478 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcceeCC-HHHHHH--H-HHHHHHHHHHHHHHHcCCeecchHHH----HHHHHHH-HHHH
Confidence 999999999999999999999999872 222222 2 2455556666644 445555677864 3334434 3567
Q ss_pred HHHHHHHhccCCcceeeccCCccchhhhhhccccccccCCchhHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCchHHHHH
Q 041629 232 LEYLLKSLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDDNEGLPLQML 311 (362)
Q Consensus 232 ~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~s~l~~P~~~ll~lnl~alv~gi~r~~~~~~~~~~~~~~~~ 311 (362)
.+++.+++++++.+|+||+||+..+.+ . .++++.|+++++++|++|+++|++|+..+..+.+.++.+++
T Consensus 479 ~~~~~~~~~~~~~~F~VT~Kg~~~~~~-~----------~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (713)
T TIGR03030 479 PPVLVTLLNPKKPKFNVTPKGELLDED-Y----------FSPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLG 547 (713)
T ss_pred HHHHHHHhCcCCCCceecCCCcccccc-c----------cchHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHH
Confidence 888888999999999999999753221 1 23699999999999999999999998754434455667777
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCchh
Q 041629 312 LAGFIMLNCWPVYEAMVLRTDKGKMPTK 339 (362)
Q Consensus 312 ~~~wvv~~l~p~~~al~~rk~k~~iP~~ 339 (362)
|+.++++.+...+.+..+|+++++-|+.
T Consensus 548 w~~~n~~~~~~~~~~~~~r~QrR~~~Rv 575 (713)
T TIGR03030 548 WNLLNLILLGAALAVVAERRQRRSSPRI 575 (713)
T ss_pred HHHHHHHHHHHHHHHHccCCCCCCcccE
Confidence 7777777777777777888888876654
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.85 E-value=7.8e-09 Score=111.18 Aligned_cols=92 Identities=11% Similarity=0.008 Sum_probs=72.4
Q ss_pred HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhh
Q 041629 73 AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFW 151 (362)
Q Consensus 73 ~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y 151 (362)
+|||.+.+.++++||++.|.+.....-+.+|+|+.++.+||.||++|++|.+. . +. .+||++ ||++|++..+.
T Consensus 329 seD~~~a~~l~~~GyrV~~~pd~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~-~---l~--~~gl~~~~R~~~l~g~~~ 402 (691)
T PRK05454 329 SHDFVEAALMRRAGWGVWLAPDLPGSYEELPPNLLDELKRDRRWCQGNLQHLR-L---LL--AKGLHPVSRLHFLTGIMS 402 (691)
T ss_pred cHHHHHHHHHHHCCCEEEEcCccccccccCCCCHHHHHHHHHHHHhchHHHHH-H---HH--hcCCCHHHHHHHHHHHHH
Confidence 57999999999999999996532334688999999999999999999999874 2 33 389999 99999987776
Q ss_pred cch-hHHHHHHHHHHHHHHh
Q 041629 152 PIW-SIPIMVYAFLPQLALA 170 (362)
Q Consensus 152 ~~~-~l~~liyll~P~l~Ll 170 (362)
++. +++.+..++.|++.+.
T Consensus 403 yl~~P~wll~l~l~~~~~~~ 422 (691)
T PRK05454 403 YLSAPLWLLFLLLGTALALQ 422 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 655 4555555566665544
No 14
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=98.77 E-value=3.6e-08 Score=100.75 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=86.4
Q ss_pred CCCcchHHHHHHHHhh---------hhhccccc-CCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCc
Q 041629 61 GGSALTFFAFMEAAKF---------AAHWLPFC-RKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCP 130 (362)
Q Consensus 61 g~s~l~~~al~e~~~f---------at~~~~~~-rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nP 130 (362)
+.++.+.+++.+.+.| .-...++. .|++..|+ |++.+.-.+|+++++..+||.||++|.+|++....++
T Consensus 218 a~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~-~~a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~ 296 (439)
T TIGR03111 218 AFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLC-ENAIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFES 296 (439)
T ss_pred HHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEEC-CCCEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhh
Confidence 3456888888875444 44444553 47887775 5566667789999999999999999999998754445
Q ss_pred ccccccCCCc-hhhhhhhhhhhcchhHHHHHHHHHHHHHHhcCCccc
Q 041629 131 ITFGIRTMGL-MGLAYAHYSFWPIWSIPIMVYAFLPQLALASGISIF 176 (362)
Q Consensus 131 l~~g~~gL~l-QRL~Y~~~~~y~~~~l~~liyll~P~l~Ll~Gi~i~ 176 (362)
... ++.++ ++.++......+...+|+.++.++|+++.++|.++.
T Consensus 297 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 297 ANK--SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred hhh--chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 442 56888 988877767777779999999999999999997555
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.63 E-value=3e-07 Score=93.97 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=74.1
Q ss_pred CcchHHHHHH---------HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccc
Q 041629 63 SALTFFAFME---------AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITF 133 (362)
Q Consensus 63 s~l~~~al~e---------~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~ 133 (362)
..++.+++.| +||..-+|.++.+||++.|. |++...+..|+|+.++.+||.||++|.+|+++. +-.
T Consensus 235 ~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~-p~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~-~~~--- 309 (444)
T PRK14583 235 AAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFE-PRGLCWILMPETLRGLWKQRLRWAQGGAEVFLK-NMF--- 309 (444)
T ss_pred eEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEe-eccEEeeeCCCCHHHHHHHHHHHhCcHHHHHHH-HHH---
Confidence 4567777766 67888889999999999995 456667999999999999999999999999874 211
Q ss_pred cccCCCc-hhhhhhhhhhhcchhHHHHHHHHHHHHHHhcCC
Q 041629 134 GIRTMGL-MGLAYAHYSFWPIWSIPIMVYAFLPQLALASGI 173 (362)
Q Consensus 134 g~~gL~l-QRL~Y~~~~~y~~~~l~~liyll~P~l~Ll~Gi 173 (362)
+-.++ +|..+.....|....+....+++.++++++..+
T Consensus 310 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (444)
T PRK14583 310 --KLWRWRNRRMWLLFLEYSLSITWAFTYLFSITLYLLGLV 348 (444)
T ss_pred --HHhCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22355 554444434455555556666666666655443
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.59 E-value=1.1e-07 Score=95.30 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=61.4
Q ss_pred EEecCCCCCcchHHHHHH---------HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhh
Q 041629 55 VYVSDDGGSALTFFAFME---------AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAF 125 (362)
Q Consensus 55 ~~~sddg~s~l~~~al~e---------~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~ 125 (362)
+..-.-..+.++.+++.| |||.+..|.+|.+||++.|.+ ++...+.+|||+.++.+||.||++|++|++.
T Consensus 211 ~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~-~~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~ 289 (439)
T COG1215 211 ISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVP-EAIVWTEAPETLKELWRQRLRWARGGLQVLL 289 (439)
T ss_pred eEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEee-cceEeeeCcccHHHHHHHHHHHHcccceeee
Confidence 334444478889999988 689999999999999999976 5667899999999999999999999999986
Q ss_pred h
Q 041629 126 S 126 (362)
Q Consensus 126 s 126 (362)
.
T Consensus 290 ~ 290 (439)
T COG1215 290 L 290 (439)
T ss_pred h
Confidence 3
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.52 E-value=3.1e-07 Score=92.44 Aligned_cols=101 Identities=17% Similarity=0.151 Sum_probs=68.2
Q ss_pred CcchHHHHHH---------HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccc
Q 041629 63 SALTFFAFME---------AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITF 133 (362)
Q Consensus 63 s~l~~~al~e---------~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~ 133 (362)
..++.+++.+ +||+.-.+.++.+||++.|. |++......|+|+.++.+||.||++|.+|.++ ++.+
T Consensus 214 ~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~-p~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~-~~~~--- 288 (420)
T PRK11204 214 TAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYE-PRALCWILMPETLKGLWKQRLRWAQGGAEVLL-KNFR--- 288 (420)
T ss_pred eeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEec-cccEEEeECcccHHHHHHHHHHHhcCHHHHHH-HHHH---
Confidence 4566777766 57777788899999999995 55666799999999999999999999999986 4322
Q ss_pred cccCCCc-hhhhhhhhhhhcchhHHHHHHHHHHHHHHh
Q 041629 134 GIRTMGL-MGLAYAHYSFWPIWSIPIMVYAFLPQLALA 170 (362)
Q Consensus 134 g~~gL~l-QRL~Y~~~~~y~~~~l~~liyll~P~l~Ll 170 (362)
+.++. +|..|.....|-...+....+++.++++++
T Consensus 289 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (420)
T PRK11204 289 --RLWRWKNRRMWPLFFEYILSILWAYTMLLILLLWLI 324 (420)
T ss_pred --HhcCccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445 544443322232333333344444444443
No 18
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=98.18 E-value=7e-07 Score=85.22 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=44.2
Q ss_pred HHHhhhhhcccccCCceeeecCcccc-ccccCCCChhhhhHHHHHHhhhhHH
Q 041629 72 EAAKFAAHWLPFCRKFNLMERNPRAY-FSSSSSTSTHACCSEIKRWAIGLLE 122 (362)
Q Consensus 72 e~~~fat~~~~~~rGw~s~y~~p~~~-f~GlaP~~l~~~l~QR~RWa~G~lQ 122 (362)
.+|||...+.++.+||+++|.+ ++. ..+.+|+|+.++++||.||++|++|
T Consensus 203 l~eD~~l~~~~~~~G~ri~~~~-~~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 203 LSHDFVEAALMRRAGWEVRLAP-DLEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ecHHHHHHHHHHHcCCEEEEcc-CCcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 4799999999999999999964 433 3588999999999999999999998
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=97.94 E-value=6.8e-05 Score=78.41 Aligned_cols=77 Identities=10% Similarity=-0.011 Sum_probs=55.2
Q ss_pred HHHhhhhhcccccCCceeeecCcc--------------ccccccCCCChhhhhHHHHHHhhhh-HHHhhhh--cCccccc
Q 041629 72 EAAKFAAHWLPFCRKFNLMERNPR--------------AYFSSSSSTSTHACCSEIKRWAIGL-LEVAFSR--YCPITFG 134 (362)
Q Consensus 72 e~~~fat~~~~~~rGw~s~y~~p~--------------~~f~GlaP~~l~~~l~QR~RWa~G~-lQIf~sk--~nPl~~g 134 (362)
.|||+.-++.++.+||++.|.+-. .+..+.+|+|++++.+||.||+.|- +|..... .+++.
T Consensus 261 LTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~-- 338 (504)
T PRK14716 261 LTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA-- 338 (504)
T ss_pred cchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--
Confidence 468888888899999999995532 1234789999999999999999994 7985321 11221
Q ss_pred ccCCCc-hhhhhhhhhh
Q 041629 135 IRTMGL-MGLAYAHYSF 150 (362)
Q Consensus 135 ~~gL~l-QRL~Y~~~~~ 150 (362)
.+.+.| ||..-+...+
T Consensus 339 ~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 339 TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 245667 7877766443
No 20
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=97.68 E-value=7.5e-05 Score=66.63 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=49.6
Q ss_pred CCcchHHHHHHH----------HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhh
Q 041629 62 GSALTFFAFMEA----------AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGL 120 (362)
Q Consensus 62 ~s~l~~~al~e~----------~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~ 120 (362)
+++++.+++.|. ||+.-++.+..+||++.|.+ .......+|+|+.++++||+||+.|.
T Consensus 76 ~~~~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~-~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 76 GMLFRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVP-DAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ceeeeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEec-ccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 578888999886 66777777889999999975 44557889999999999999999997
No 21
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=97.64 E-value=2.8e-05 Score=72.89 Aligned_cols=52 Identities=12% Similarity=-0.039 Sum_probs=44.2
Q ss_pred HHHHhhhhhcccccCCceeeec-CccccccccCCCChhhhhHHHHHHhhhhHH
Q 041629 71 MEAAKFAAHWLPFCRKFNLMER-NPRAYFSSSSSTSTHACCSEIKRWAIGLLE 122 (362)
Q Consensus 71 ~e~~~fat~~~~~~rGw~s~y~-~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQ 122 (362)
.-+||+.-.+.+..+||++.|. .|.+.....+|+++.++++||.||++|++.
T Consensus 191 ~~~ED~~l~~~l~~~G~~~~~~~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 191 DLGEDRILCTLLLKAGPKRKYLYVPGAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred hHhcccceeHHHhccCCccEEEEecccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 3468888888899999999983 455666799999999999999999999873
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.61 E-value=0.00018 Score=78.30 Aligned_cols=56 Identities=9% Similarity=0.026 Sum_probs=46.0
Q ss_pred HHHHHhhhhhcccccCCceeeecCcc----------------------ccccccCCCChhhhhHHHHHHhhh-hHHHhh
Q 041629 70 FMEAAKFAAHWLPFCRKFNLMERNPR----------------------AYFSSSSSTSTHACCSEIKRWAIG-LLEVAF 125 (362)
Q Consensus 70 l~e~~~fat~~~~~~rGw~s~y~~p~----------------------~~f~GlaP~~l~~~l~QR~RWa~G-~lQIf~ 125 (362)
-..|||+.-+|.++.+||++.|.+.+ .......|+++.+..+||.||.+| ++|.+.
T Consensus 256 ~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 256 QSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred CcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 34589999999999999999996611 123456699999999999999999 799864
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=97.32 E-value=0.00013 Score=66.84 Aligned_cols=64 Identities=11% Similarity=0.027 Sum_probs=50.4
Q ss_pred CcchHHHHHHHH---------hhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhc
Q 041629 63 SALTFFAFMEAA---------KFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRY 128 (362)
Q Consensus 63 s~l~~~al~e~~---------~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~ 128 (362)
..++.+++.+.+ |+.-...++.+||+..|.+ +..-....|+|+.++.+||.||++|.+|++. ||
T Consensus 163 ~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~-~~ 235 (236)
T cd06435 163 CLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVA-QSYGHGLIPDTFEAFKKQRFRWAYGAVQILK-KH 235 (236)
T ss_pred EEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcc-hhhccCcCcccHHHHHHHHHHHhcchhhhhh-cc
Confidence 456777777754 4444555888999999965 4444678999999999999999999999974 44
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=97.28 E-value=0.0002 Score=66.50 Aligned_cols=61 Identities=8% Similarity=0.018 Sum_probs=48.9
Q ss_pred CcchHHHHHHH---------HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhh
Q 041629 63 SALTFFAFMEA---------AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAF 125 (362)
Q Consensus 63 s~l~~~al~e~---------~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~ 125 (362)
.+++.+++.+. ||+.-...++.+||++.+.+. .. ....|+++.++..||.||++|.+|++.
T Consensus 166 ~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~-~~-~~~~~~~~~~~~~q~~Rw~~g~~~~~~ 235 (241)
T cd06427 166 NHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNS-TT-LEEANNALGNWIRQRSRWIKGYMQTWL 235 (241)
T ss_pred HHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEecc-cc-cccCcHhHHHHHHHHHHHhccHHHHHH
Confidence 45677777764 555555667889999999753 33 478999999999999999999999985
No 25
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=97.23 E-value=0.00021 Score=65.53 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=45.5
Q ss_pred CcchHHHHHHH---------HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhh
Q 041629 63 SALTFFAFMEA---------AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIG 119 (362)
Q Consensus 63 s~l~~~al~e~---------~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G 119 (362)
..++.+++.+. ||+.-.+.+..+||+..|.. .+......|+++.++..||+||++|
T Consensus 167 ~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~-~~~v~~~~~~~~~~~~~q~~rW~~g 231 (232)
T cd06437 167 GVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLD-DVVVPAELPASMSAYRSQQHRWSKG 231 (232)
T ss_pred hhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEec-cceeeeeCCcCHHHHHHHHHHhccC
Confidence 35677777774 55555566888999999964 6667899999999999999999998
No 26
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=97.17 E-value=0.00018 Score=65.31 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=50.1
Q ss_pred CCCcchHHHHHHHH---------hhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHh
Q 041629 61 GGSALTFFAFMEAA---------KFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVA 124 (362)
Q Consensus 61 g~s~l~~~al~e~~---------~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf 124 (362)
++..++.+++.+.+ |..-.+.+.++||++.|.+ .+...+.+|+++.++++||.||++|++|++
T Consensus 163 ~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~-~~~~~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 163 SGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVP-EPLAAGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred ceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEec-CccccccCCccHHHHHHHHHHHhcCCeeeC
Confidence 45677777777654 4444555888999999966 455678999999999999999999999863
No 27
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=96.78 E-value=0.00062 Score=61.87 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=41.2
Q ss_pred CCCcchHHHHHHH---------HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhh
Q 041629 61 GGSALTFFAFMEA---------AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIG 119 (362)
Q Consensus 61 g~s~l~~~al~e~---------~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G 119 (362)
++..++.+++.+. ||+.-......+||++.|. |.+......|.+++++.+||.||++|
T Consensus 162 ~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~-~~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 162 SGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYA-PDALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEE-EEEEEEE--SSSTHHHHHHHHHHH--
T ss_pred cEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEE-CCcEEEEeCCCCHHHHHHHHhccCcC
Confidence 3557778888776 4444455578899999995 56777899999999999999999998
No 28
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=95.95 E-value=0.034 Score=58.63 Aligned_cols=43 Identities=12% Similarity=0.092 Sum_probs=34.5
Q ss_pred hhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhH
Q 041629 78 AHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLL 121 (362)
Q Consensus 78 t~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~l 121 (362)
|..+-+-.|||..|+. .+...-.+|++++.++.||+||..|++
T Consensus 333 tLlLk~~~~~k~~y~~-~A~a~T~aP~t~~vflsQRRRWinSTi 375 (527)
T PF03142_consen 333 TLLLKQFPGYKTEYVP-SAVAYTDAPETFSVFLSQRRRWINSTI 375 (527)
T ss_pred HHHHhhCCCceEEEcc-cccccccCCccHHHHHHHhhhccchhH
Confidence 3333344589999965 555578899999999999999999998
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=95.56 E-value=0.0054 Score=55.14 Aligned_cols=57 Identities=26% Similarity=0.317 Sum_probs=43.0
Q ss_pred CcchHHHHHHHHhhhh-----------hcccccCCc-eeeec-CccccccccCCCChhhhhHHHHHHhhh
Q 041629 63 SALTFFAFMEAAKFAA-----------HWLPFCRKF-NLMER-NPRAYFSSSSSTSTHACCSEIKRWAIG 119 (362)
Q Consensus 63 s~l~~~al~e~~~fat-----------~~~~~~rGw-~s~y~-~p~~~f~GlaP~~l~~~l~QR~RWa~G 119 (362)
..++.+++.+.+.|.. ......+|| ++.+. +|......-.|+++.++.+||+||++|
T Consensus 160 ~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 160 MAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred EEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 3567777888776632 122567899 88775 455666788999999999999999998
No 30
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=95.43 E-value=0.0066 Score=55.24 Aligned_cols=40 Identities=5% Similarity=0.087 Sum_probs=32.4
Q ss_pred ccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhH
Q 041629 81 LPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLL 121 (362)
Q Consensus 81 ~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~l 121 (362)
....+||+..|... +...-.+|+++.++++||.||++|..
T Consensus 194 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 194 YVLSHGYKTVYQYT-SEAYTETPENYKKFLKQQLRWSRSNW 233 (235)
T ss_pred HHHHCCCeEEEecC-CeEEEEcchhHHHHHHHhhhhhhccc
Confidence 36688999999654 33345599999999999999999974
No 31
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=93.87 E-value=0.042 Score=49.17 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=41.9
Q ss_pred CCcchHHHHHHHHhhh-----------hhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhh
Q 041629 62 GSALTFFAFMEAAKFA-----------AHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAI 118 (362)
Q Consensus 62 ~s~l~~~al~e~~~fa-----------t~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~ 118 (362)
+.+++.+++.+.+.|. =...+..+||++.|.. .+......|+++.++++||.||++
T Consensus 128 ~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~-~~~~~~~~~~~~~~~~~q~~rw~~ 194 (196)
T cd02520 128 SMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSP-YVVMQPLGSTSLASFWRRQLRWSR 194 (196)
T ss_pred eeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcc-hheeccCCcccHHHHHHHHHHHhc
Confidence 4556667676655443 3335677899999864 455678899999999999999986
No 32
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=93.48 E-value=0.28 Score=54.30 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=33.4
Q ss_pred cccccCCceeeecCccccccccCCCChhhhhHHHHHHhhh
Q 041629 80 WLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIG 119 (362)
Q Consensus 80 ~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G 119 (362)
|.+-.|||+..|+. ++...--+||+..+++.||+||.-|
T Consensus 558 ~~llskgy~l~Y~a-~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 558 TLLLSKGYRLKYVA-ASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred HHHHhccceeeeec-cccccccCcHhHHHHHHHhhhhccc
Confidence 33556799999987 5666788999999999999999999
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=93.37 E-value=0.046 Score=50.36 Aligned_cols=49 Identities=12% Similarity=0.024 Sum_probs=40.2
Q ss_pred HHhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHH
Q 041629 73 AAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLE 122 (362)
Q Consensus 73 ~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQ 122 (362)
.||+.-.....-+||++.+.+ .+......|.+..++.+|+.||++|.+|
T Consensus 202 ~eD~~l~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 202 NDDFVLPLRIARQGYRVVYEP-DAVAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred hhHHHHHHHHHHcCCeEEecc-ccEEEEeCcccHHHHHHHHHHHHhcccc
Confidence 456555556677899999865 4556789999999999999999999987
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=93.12 E-value=0.17 Score=53.28 Aligned_cols=74 Identities=5% Similarity=-0.073 Sum_probs=51.3
Q ss_pred cccCCceeeecCc-cccccccCCCChhhhhHHHHHHhhhhHHHhhhhcCcccccccCCCc-hhhhhhhhhhhc-chhHHH
Q 041629 82 PFCRKFNLMERNP-RAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYCPITFGIRTMGL-MGLAYAHYSFWP-IWSIPI 158 (362)
Q Consensus 82 ~~~rGw~s~y~~p-~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~nPl~~g~~gL~l-QRL~Y~~~~~y~-~~~l~~ 158 (362)
+-..||.+-- .| -.-+---.|.|+.|.++.-.|||+|++|-+ +++. .+||.+ .|+.++...+.+ ..+++.
T Consensus 358 mRRaGW~v~i-a~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl~~-~~GlHwvsR~h~~tGVmsYlsaPlWf 430 (736)
T COG2943 358 MRRAGWGVWI-AYDLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RLFL-VKGLHWVSRAHFLTGVMSYLSAPLWF 430 (736)
T ss_pred HhhcCceEEE-eccCCCchhhCCchHHHHHhhhhHhhhcchhhc-----eeec-cCCccHHHHHHHHHHHHHHHhhHHHH
Confidence 4467887632 32 112234589999999999999999999964 3453 599999 999988877655 344444
Q ss_pred HHHH
Q 041629 159 MVYA 162 (362)
Q Consensus 159 liyl 162 (362)
++.+
T Consensus 431 l~ll 434 (736)
T COG2943 431 LFLL 434 (736)
T ss_pred HHHH
Confidence 4433
No 35
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=92.58 E-value=0.083 Score=52.88 Aligned_cols=58 Identities=12% Similarity=-0.000 Sum_probs=44.2
Q ss_pred cchHHHHHHH-----------HhhhhhcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHH
Q 041629 64 ALTFFAFMEA-----------AKFAAHWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLE 122 (362)
Q Consensus 64 ~l~~~al~e~-----------~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQ 122 (362)
.++.+++.+. ||++-......+||++.+.+ ........|+|+.++.+||.||++..-.
T Consensus 206 a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~-~~v~~~~~~~s~~~~~~q~~RW~r~~~~ 274 (373)
T TIGR03472 206 ALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAP-VVVDTDVHETSFATLLAHELRWSRTIRA 274 (373)
T ss_pred heeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecc-hhhhcCCCccCHHHHHHHHHHHHhhhhc
Confidence 4567777664 55555666888999999864 4444678899999999999999877653
No 36
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=90.66 E-value=0.22 Score=46.59 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHHHHHHhcCC--------CcceeEEecCCCCCc
Q 041629 28 PYKEPPLSVVNTALSVMAYDYP--------TEKLSVYVSDDGGSA 64 (362)
Q Consensus 28 ~~~e~~~~~~~~~~~~~a~~yp--------~~~~~~~~sddg~s~ 64 (362)
.++|++-+..+|+.|+++.||| .+++.+.+-|||++-
T Consensus 5 ~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d 49 (244)
T cd04190 5 MYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK 49 (244)
T ss_pred eecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc
Confidence 4799999999999999999999 799999999999886
No 37
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=89.91 E-value=0.33 Score=44.02 Aligned_cols=66 Identities=6% Similarity=-0.059 Sum_probs=46.7
Q ss_pred CCcchHHHHHHHHhhhh----------hcccccCCceeeecCccccccccCCCChhhhhHHHHHHhhhhHHHhhhhcC
Q 041629 62 GSALTFFAFMEAAKFAA----------HWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAIGLLEVAFSRYC 129 (362)
Q Consensus 62 ~s~l~~~al~e~~~fat----------~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~G~lQIf~sk~n 129 (362)
...++.+.+.+.+.|.+ ......+|+++.|.. .....--.|.+++++..|+.||+.|..|... ++.
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~-~~~~~~~~~~s~~~~~~~~~r~~~~~~~~~~-~~~ 235 (249)
T cd02525 160 HGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSP-DIRVYYYPRSTLKKLARQYFRYGKWRARTLR-KHR 235 (249)
T ss_pred cceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcC-CeEEEEcCCCCHHHHHHHHHHHhhhhHHHHH-hCc
Confidence 34555666665543433 223667899999854 4444566789999999999999999999875 443
No 38
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=89.31 E-value=0.35 Score=43.53 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=39.6
Q ss_pred cchHHHHHH-----------HHhhhhhcccccCCceeeecCccccccccCC----CChhhhhHHHHHHhh
Q 041629 64 ALTFFAFME-----------AAKFAAHWLPFCRKFNLMERNPRAYFSSSSS----TSTHACCSEIKRWAI 118 (362)
Q Consensus 64 ~l~~~al~e-----------~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP----~~l~~~l~QR~RWa~ 118 (362)
.++.+++.+ +|||+-.-.++.+||+++..+ .+......| +++.+++.++.||++
T Consensus 107 ~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~-~~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 107 AFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSP-YPVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred eeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcc-hheeecccCccccccHHHHHHHHHhhcC
Confidence 455666655 577777777999999998855 333334455 479999999999985
No 39
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=87.08 E-value=0.4 Score=52.46 Aligned_cols=52 Identities=6% Similarity=0.020 Sum_probs=42.5
Q ss_pred HHhhhhhcccccCCceeeecCc----------------------cccccccCCCChhhhhHHHHHHhhhhH-HHh
Q 041629 73 AAKFAAHWLPFCRKFNLMERNP----------------------RAYFSSSSSTSTHACCSEIKRWAIGLL-EVA 124 (362)
Q Consensus 73 ~~~fat~~~~~~rGw~s~y~~p----------------------~~~f~GlaP~~l~~~l~QR~RWa~G~l-QIf 124 (362)
|||..-+|.++.+||++.+..= ..+.....|.++.+.+.||.||-.|-. |-.
T Consensus 267 TED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 267 TEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred hHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 8888899999999999999110 134455789999999999999999977 764
No 40
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=83.43 E-value=2 Score=42.97 Aligned_cols=48 Identities=31% Similarity=0.425 Sum_probs=40.6
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHHHH
Q 041629 25 NPDPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFMEAA 74 (362)
Q Consensus 25 ~~~~~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e~~ 74 (362)
-.=.++|++.+..+|+.|+.+.|||. +.+++-|||++-=+.+-+.|..
T Consensus 59 iiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~~~ 106 (439)
T COG1215 59 IIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEELG 106 (439)
T ss_pred EEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHHHH
Confidence 44578999999999999999999999 8899999998876666666543
No 41
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=80.92 E-value=3 Score=37.47 Aligned_cols=36 Identities=47% Similarity=0.713 Sum_probs=32.1
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCc
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~ 64 (362)
++|++.....++-|+++.+||.+++.+.+.|||++-
T Consensus 10 ~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d 45 (234)
T cd06421 10 YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRP 45 (234)
T ss_pred CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCch
Confidence 567777889999999999999999999999999764
No 42
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=71.58 E-value=6.8 Score=40.19 Aligned_cols=43 Identities=19% Similarity=0.380 Sum_probs=35.2
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
++|. -...+|+.|+...|||.+++.+.+-|||++-=|.+-+.+
T Consensus 58 yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~ 100 (439)
T TIGR03111 58 YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCR 100 (439)
T ss_pred CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHH
Confidence 5566 567899999999999999999999999988766555444
No 43
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=67.93 E-value=9.3 Score=33.93 Aligned_cols=39 Identities=28% Similarity=0.315 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 33 PLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 33 ~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
+-.+..|+-|++..+||.+++.+.+.|||++--+.+.++
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~ 47 (229)
T cd04192 9 AENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE 47 (229)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH
Confidence 466889999999999999999999999998765555443
No 44
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=63.38 E-value=45 Score=33.45 Aligned_cols=58 Identities=14% Similarity=-0.155 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHHhhhh-----------hcccccCCceeeecCccccccccCCCChhhhhHHHHHHhh
Q 041629 61 GGSALTFFAFMEAAKFAA-----------HWLPFCRKFNLMERNPRAYFSSSSSTSTHACCSEIKRWAI 118 (362)
Q Consensus 61 g~s~l~~~al~e~~~fat-----------~~~~~~rGw~s~y~~p~~~f~GlaP~~l~~~l~QR~RWa~ 118 (362)
+...++.+++.+++.|.. ......+|+++.+.+.....+--.-++..+...|+.||+-
T Consensus 212 ~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 212 GCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAARTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred eEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCceEEEEecCCHHHHHHHHHHhHH
Confidence 345678888888766653 2335567999998765333222335688899999999943
No 45
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=55.07 E-value=20 Score=32.86 Aligned_cols=41 Identities=32% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAF 70 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al 70 (362)
++|+ .....|+.|+++.+||.+++.+-+-|||++--+.+-+
T Consensus 10 ~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~ 50 (241)
T cd06427 10 YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAA 50 (241)
T ss_pred CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHH
Confidence 5665 5678999999999999889999998998776554433
No 46
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=53.74 E-value=25 Score=32.00 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 34 LSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 34 ~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
-....++.|+++.+||.++..+.+.|||++.-+.+.+.
T Consensus 42 ~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~ 79 (251)
T cd06439 42 AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAR 79 (251)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHH
Confidence 55689999999999999999999999998875555444
No 47
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=52.04 E-value=26 Score=30.65 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=31.6
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
++|+ -....++.|++..+|| +..+.+.|||++-=+.+.+++
T Consensus 7 yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~ 47 (214)
T cd04196 7 YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKE 47 (214)
T ss_pred cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHH
Confidence 3444 4567999999999998 789999999988755555443
No 48
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=50.50 E-value=24 Score=36.13 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 28 PYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 28 ~~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
.++|+.. ..+|+.|+++.||| ++.+.+-|||++.=+.+.+.+
T Consensus 83 ~yNE~~~-i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~ 124 (444)
T PRK14583 83 CFNEGLN-ARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA 124 (444)
T ss_pred eCCCHHH-HHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH
Confidence 4567754 67999999999999 488999999987755555444
No 49
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=45.21 E-value=35 Score=29.76 Aligned_cols=35 Identities=31% Similarity=0.407 Sum_probs=29.2
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCc
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~ 64 (362)
++|+ -...+|+-|+.+.+||..++.+.+-|||++-
T Consensus 6 ~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D 40 (183)
T cd06438 6 HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTD 40 (183)
T ss_pred cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCc
Confidence 4555 4567899999999999888999999999775
No 50
>PRK11204 N-glycosyltransferase; Provisional
Probab=44.35 E-value=41 Score=33.72 Aligned_cols=42 Identities=29% Similarity=0.290 Sum_probs=32.3
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 28 PYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 28 ~~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
.++|+ ....+|+.|+++.+|| ++.+.+-|||++-=+.+.+.+
T Consensus 62 ~yne~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~ 103 (420)
T PRK11204 62 CYNEG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDR 103 (420)
T ss_pred cCCCH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHH
Confidence 36665 4578999999999999 678899999988655555443
No 51
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=43.96 E-value=31 Score=31.13 Aligned_cols=35 Identities=40% Similarity=0.567 Sum_probs=29.5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcc
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSAL 65 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l 65 (362)
++|++.+..+++.|+...+||. ..+.+-|||++-=
T Consensus 7 ~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~ 41 (236)
T cd06435 7 YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDE 41 (236)
T ss_pred CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCch
Confidence 6788888899999999999984 6788989997653
No 52
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=40.75 E-value=40 Score=32.08 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=27.1
Q ss_pred CCCChHHHHHHHHHHHH----hcCCCcceeEEecCCCCCc
Q 041629 29 YKEPPLSVVNTALSVMA----YDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a----~~yp~~~~~~~~sddg~s~ 64 (362)
++||+-+..+|+.++.. .||++ ++.+++-|||...
T Consensus 8 ~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~ 46 (254)
T cd04191 8 YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDP 46 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCCh
Confidence 68999999999988764 35533 5899999999653
No 53
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=40.03 E-value=1.6e+02 Score=27.03 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhcC
Q 041629 274 MFVTLAVAAIVNFFSFSFGFLQMICG 299 (362)
Q Consensus 274 l~~P~~~ll~lnl~alv~gi~r~~~~ 299 (362)
.......++.+.+.+++.|+..++..
T Consensus 80 ~~~ld~~L~~~~if~~~~gi~~~f~~ 105 (206)
T PF06570_consen 80 LMALDNSLLFFGIFSLLFGIMGFFSP 105 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45555666777788888888776643
No 54
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=37.86 E-value=70 Score=28.83 Aligned_cols=42 Identities=29% Similarity=0.342 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
++|.- ....++-|+++.|||.+++.+.+.|| ++-=|.+.+.+
T Consensus 10 yNe~~-~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~ 51 (232)
T cd06437 10 FNEKY-VVERLIEAACALDYPKDRLEIQVLDD-STDETVRLARE 51 (232)
T ss_pred CCcHH-HHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHH
Confidence 46644 56899999999999999989989888 66555555544
No 55
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=33.11 E-value=82 Score=31.40 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=28.0
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
++|.+ ...+++.|+++.|||. +.+-+.||+.+--+.+-++
T Consensus 50 ~nee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~ 89 (373)
T TIGR03472 50 HGDEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVR 89 (373)
T ss_pred CCCCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHH
Confidence 44555 4579999999999997 6666777776654444333
No 56
>PF15050 SCIMP: SCIMP protein
Probab=32.94 E-value=50 Score=28.46 Aligned_cols=39 Identities=18% Similarity=0.470 Sum_probs=21.9
Q ss_pred cccccchhhhhhHHHHHHHHH-----HHHHHHHhccCCcceeecc
Q 041629 211 KWWNDQRIWLIRGLSCHLFGT-----LEYLLKSLGISAFGFNVTS 250 (362)
Q Consensus 211 ~wwr~qr~w~i~~~~~~l~a~-----~~~llk~l~~~~~~F~VT~ 250 (362)
+|||+ -||+|.++..-+.++ +-.+.+.....+.+++++.
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiak 45 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAK 45 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceecc
Confidence 68997 689887664322111 1112233334667888875
No 57
>PHA00726 hypothetical protein
Probab=31.90 E-value=86 Score=25.38 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhhCCCCCchhh---------HHHHHHHHHHHHHhhe
Q 041629 318 LNCWPVYEAMVLRTDKGKMPTKV---------TIIAAFLAWTLYAAAF 356 (362)
Q Consensus 318 ~~l~p~~~al~~rk~k~~iP~~v---------~~~s~~la~~~~~~~~ 356 (362)
.-...+..++++||.|.+.-.+. ++.|.++|++.+|+++
T Consensus 15 fD~i~l~~sLLFRKpK~k~~~~~~~~r~iGyYlVissv~aL~vsH~~~ 62 (89)
T PHA00726 15 FDTIMLTTALLFRKPKPKKVKSTLNHRSIGYYLVISSVLALIVSHFVS 62 (89)
T ss_pred HHHHHHHHHHHhcCCCCchhhcCCCCcceeeeeHHHHHHHHHHHHHHH
Confidence 44566778899999986653221 4568888888888765
No 58
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=31.08 E-value=87 Score=25.76 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHHH
Q 041629 33 PLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFME 72 (362)
Q Consensus 33 ~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~e 72 (362)
+-...+|+.|+.+.++ .+..+.+.|||++.=+.+.+.+
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~~~~~~~~ 46 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTDGSVELLRE 46 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCchHHHHHHH
Confidence 5667999999999988 5678999999987655555543
No 59
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=29.60 E-value=1.3e+02 Score=33.12 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=27.0
Q ss_pred CCCCCChHHHH----HHHHHHHHhcCCCcceeEEecCCCCCc
Q 041629 27 DPYKEPPLSVV----NTALSVMAYDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 27 ~~~~e~~~~~~----~~~~~~~a~~yp~~~~~~~~sddg~s~ 64 (362)
=.++|++-.+. ++..|+.+.||+ +++.+|+-||+...
T Consensus 131 P~yNEd~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~ 171 (691)
T PRK05454 131 PIYNEDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDP 171 (691)
T ss_pred eCCCCChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCCh
Confidence 45678887554 445577778897 58999999998664
No 60
>PF07557 Shugoshin_C: Shugoshin C terminus; InterPro: IPR011515 This entry represents the C-terminal domain of Shugoshin (Sgo1) kinetochore-attachment proteins. Shugoshin has a conserved coiled-coil N-terminal domain and a highly conserved C-terminal basic region (IPR011516 from INTERPRO). Shugoshin is a crucial target of Bub1 kinase that plays a central role in chromosome cohesion during mitosis and meiosis divisions by preventing premature dissociation of cohesin complex from centromeres after prophase, when most of cohesin complex dissociates from chromosomes arms [, ]. Shugoshin is thought to act by protecting Rec8 and Rad21 at the centromeres from separase degradation during anaphase I (during meiosis) so that sister chromatids remain tethered []. Shugoshin also acts as a spindle checkpoint component required for sensing tension between sister chromatids during mitosis, its degradation when they separate preventing cell cycle arrest and chromosome loss in anaphase, a time when sister chromatids are no longer under tension. Human shugoshin is diffusible and mediates kinetochore-driven formation of kinetochore-microtubules during bipolar spindle assembly []. Further, the primary role of shugoshin is to ensure bipolar attachment of kinetochores, and its role in protecting cohesion has co-developed to facilitate this process [].; GO: 0045132 meiotic chromosome segregation, 0000775 chromosome, centromeric region, 0005634 nucleus
Probab=29.48 E-value=32 Score=21.70 Aligned_cols=19 Identities=42% Similarity=0.709 Sum_probs=14.8
Q ss_pred ccccccccCCCCCCCChHHH
Q 041629 17 EPIRRTALNPDPYKEPPLSV 36 (362)
Q Consensus 17 ~~~~~~~~~~~~~~e~~~~~ 36 (362)
-|-||+..++ -|+||.+-+
T Consensus 3 r~~Rr~~~~V-sYkEPsL~~ 21 (26)
T PF07557_consen 3 RPSRRARKKV-SYKEPSLNT 21 (26)
T ss_pred cccccccccc-cccccchhh
Confidence 4678888788 899998743
No 61
>COG2028 Uncharacterized conserved protein [Function unknown]
Probab=28.81 E-value=19 Score=31.07 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=18.1
Q ss_pred cCCCChhhhhHHHHHHhhh
Q 041629 101 SSSTSTHACCSEIKRWAIG 119 (362)
Q Consensus 101 laP~~l~~~l~QR~RWa~G 119 (362)
++||.|..|++.|+||.++
T Consensus 80 LT~eElkkY~ks~~rWg~r 98 (145)
T COG2028 80 LTPEELKKYMKSRKRWGSR 98 (145)
T ss_pred cCHHHHHHHHHHHHHhccc
Confidence 7899999999999999997
No 62
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=28.61 E-value=79 Score=27.88 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=30.0
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
++|+. ....++.|+++.+| .+..+.+.||+++--+.+.+.
T Consensus 8 ~n~~~-~l~~~l~sl~~q~~--~~~evivvdd~s~d~~~~~~~ 47 (221)
T cd02522 8 LNEAE-NLPRLLASLRRLNP--LPLEIIVVDGGSTDGTVAIAR 47 (221)
T ss_pred cCcHH-HHHHHHHHHHhccC--CCcEEEEEeCCCCccHHHHHh
Confidence 45655 67899999999988 567889999998765554443
No 63
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=27.49 E-value=3.5e+02 Score=25.36 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhhhhhhcCCC---CCCchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCch
Q 041629 280 VAAIVNFFSFSFGFLQMICGSD---DNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPT 338 (362)
Q Consensus 280 ~ll~lnl~alv~gi~r~~~~~~---~~~~~~~~~~~~~wvv~~l~p~~~al~~rk~k~~iP~ 338 (362)
.++.+.+++++-|+--+++.+. ..=.++...+..++.++.+|-+..-+.. ||++.|.
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~ 160 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPG 160 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCc
Confidence 4566677777777777664331 1112444556677888888877776654 6666664
No 64
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=27.32 E-value=1.3e+02 Score=26.93 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=30.1
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcch
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALT 66 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~ 66 (362)
++|+. ...+++-|..+.+||..+..+.+.|||++-=+
T Consensus 9 ~n~~~-~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~ 45 (249)
T cd02525 9 RNEEK-YIEELLESLLNQSYPKDLIEIIVVDGGSTDGT 45 (249)
T ss_pred CCchh-hHHHHHHHHHhccCCCCccEEEEEeCCCCccH
Confidence 45554 56999999999999988899999999977533
No 65
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=25.22 E-value=1.4e+02 Score=29.91 Aligned_cols=37 Identities=27% Similarity=0.224 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 34 LSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 34 ~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
-....++-|+++.|||. ++.+.+.|||++-=|.+-+.
T Consensus 53 ~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~ 89 (384)
T TIGR03469 53 DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIAR 89 (384)
T ss_pred hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHH
Confidence 34568999999999996 48999999998875554444
No 66
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=25.02 E-value=1.5e+02 Score=25.25 Aligned_cols=38 Identities=26% Similarity=0.354 Sum_probs=29.0
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFA 69 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~a 69 (362)
++|+ -...+++.|+++.+||. ..+.+.|||++-=+.+-
T Consensus 7 ~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~ 44 (202)
T cd06433 7 YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDI 44 (202)
T ss_pred cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHH
Confidence 3454 56789999999999976 78999999987644443
No 67
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=24.89 E-value=1.3e+02 Score=31.83 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCchhhHHHHHHHHHHHH
Q 041629 317 MLNCWPVYEAMVLRTDKGKMPTKVTIIAAFLAWTLY 352 (362)
Q Consensus 317 v~~l~p~~~al~~rk~k~~iP~~v~~~s~~la~~~~ 352 (362)
++.+..-.-|+|+|+.+..+|++-++.+.++++++.
T Consensus 141 LliLlig~WAlf~R~~~a~lPRif~fRa~ll~Lvfl 176 (505)
T PF06638_consen 141 LLILLIGTWALFFRRPRADLPRIFVFRALLLVLVFL 176 (505)
T ss_pred HHHHHHHHHHHhcCcccCCCchhHHHHHHHHHHHHH
Confidence 333444556788999999999999998887777554
No 68
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=24.54 E-value=1.5e+02 Score=23.94 Aligned_cols=40 Identities=38% Similarity=0.476 Sum_probs=30.1
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
++|+ -...+|+.|++...| .+..+.+.|||++--+.+-+.
T Consensus 6 ~n~~-~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t~~~~~ 45 (180)
T cd06423 6 YNEE-AVIERTIESLLALDY--PKLEVIVVDDGSTDDTLEILE 45 (180)
T ss_pred cChH-HHHHHHHHHHHhCCC--CceEEEEEeCCCccchHHHHH
Confidence 3455 678899999999988 567789999998865544433
No 69
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=24.43 E-value=45 Score=17.34 Aligned_cols=8 Identities=63% Similarity=1.120 Sum_probs=5.5
Q ss_pred EecCCCCC
Q 041629 56 YVSDDGGS 63 (362)
Q Consensus 56 ~~sddg~s 63 (362)
|.|+|||-
T Consensus 1 ~~S~D~G~ 8 (12)
T PF02012_consen 1 YYSTDGGK 8 (12)
T ss_dssp EEESSTTS
T ss_pred CEeCCCcc
Confidence 56778764
No 70
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=23.82 E-value=1.5e+02 Score=26.08 Aligned_cols=38 Identities=13% Similarity=0.193 Sum_probs=28.1
Q ss_pred CCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHH
Q 041629 30 KEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAF 70 (362)
Q Consensus 30 ~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al 70 (362)
+|.. ....++-|+++.+||. +.+.+.||+++-=+.+.+
T Consensus 11 n~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~ 48 (196)
T cd02520 11 GVDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVV 48 (196)
T ss_pred CCCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHH
Confidence 4443 3568899999999986 888899999876444433
No 71
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=22.73 E-value=1.7e+02 Score=25.29 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=26.8
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCc
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~ 64 (362)
++|..-.+.+|+.|+++.+||. ..+.+.|||++-
T Consensus 10 ~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d 43 (202)
T cd04184 10 YNTPEKYLREAIESVRAQTYPN--WELCIADDASTD 43 (202)
T ss_pred ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCC
Confidence 3455467899999999999874 678899999764
No 72
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]
Probab=22.63 E-value=2.8e+02 Score=28.37 Aligned_cols=59 Identities=14% Similarity=0.309 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhh--cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCc
Q 041629 277 TLAVAAIVNFFSFSFGFLQMI--CGSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMP 337 (362)
Q Consensus 277 P~~~ll~lnl~alv~gi~r~~--~~~~~~~~~~~~~~~~~wvv~~l~p~~~al~~rk~k~~iP 337 (362)
|.+.+.++++++...+..... ....+.++..-++.+..|..+.++.++.|++.. -|..|
T Consensus 17 pi~alsiit~i~~~~~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~g--PG~vp 77 (414)
T KOG1314|consen 17 PITALSIITIITSTTGYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTG--PGFVP 77 (414)
T ss_pred cHHHHHHHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcC--CCCCC
Confidence 545555555555554443222 122466778888999999999999999999864 34444
No 73
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=21.94 E-value=1.7e+02 Score=25.94 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHHH
Q 041629 33 PLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAFM 71 (362)
Q Consensus 33 ~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al~ 71 (362)
.-..-.|+-|+++.+|| .+..+-+-|||++-=|.+.++
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~ 46 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIE 46 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHH
Confidence 34677899999999998 468899999998765544333
No 74
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=20.62 E-value=1.5e+02 Score=26.36 Aligned_cols=39 Identities=21% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHH
Q 041629 28 PYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAF 70 (362)
Q Consensus 28 ~~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al 70 (362)
.++|++....+|+.|+.+.+ +..+.+.|||.+.=+.+.+
T Consensus 8 ~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l 46 (235)
T cd06434 8 VYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEPYLSIL 46 (235)
T ss_pred ecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHH
Confidence 36888889999999999988 5678999999876444444
No 75
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=20.17 E-value=41 Score=30.03 Aligned_cols=37 Identities=35% Similarity=0.421 Sum_probs=25.9
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFF 68 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~ 68 (362)
++|+. ....++.|+++.+| .++.+.+.||+++.=+.+
T Consensus 10 ~~~~~-~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~ 46 (228)
T PF13641_consen 10 YNEDD-VLRRCLESLLAQDY--PRLEVVVVDDGSDDETAE 46 (228)
T ss_dssp SS-HH-HHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCT
T ss_pred cCCHH-HHHHHHHHHHcCCC--CCeEEEEEECCCChHHHH
Confidence 34555 78889999999999 559999888886543333
Done!