Query 041629
Match_columns 362
No_of_seqs 257 out of 608
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 15:29:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041629.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041629hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v58a2 d.17.3.1 (A:2-61) Thio 22.4 11 0.00083 25.6 0.6 21 44-64 29-49 (60)
2 d1qg8a_ c.68.1.1 (A:) Spore co 18.5 37 0.0027 27.3 3.3 39 29-70 10-48 (255)
3 d1xhba2 c.68.1.17 (A:95-422) P 15.8 58 0.0043 27.3 4.1 39 29-67 31-69 (328)
4 d1zfoa_ g.39.1.4 (A:) LASP-1 { 8.4 30 0.0022 20.0 -0.4 8 48-55 13-20 (30)
5 d1k8qa_ c.69.1.6 (A:) Gastric 7.9 56 0.0041 26.8 1.1 28 33-61 10-37 (377)
6 d1yj5a1 c.108.1.9 (A:144-338) 7.6 16 0.0012 30.2 -2.7 66 41-106 122-192 (195)
7 d3c7bb2 d.58.36.2 (B:4-122) Di 6.9 2.4E+02 0.018 21.0 4.3 55 54-112 38-103 (119)
8 d2axtm1 f.23.35.1 (M:1-36) Pho 6.2 2E+02 0.015 17.0 2.7 14 156-169 9-22 (36)
9 d1qfma2 c.69.1.4 (A:431-710) P 6.2 59 0.0043 25.7 0.3 17 45-62 2-18 (280)
10 d1omza_ c.68.1.15 (A:) Alpha-1 4.8 1.6E+02 0.012 21.9 2.1 23 29-52 12-34 (265)
No 1
>d1v58a2 d.17.3.1 (A:2-61) Thiol:disulfide interchange protein DsbG, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.41 E-value=11 Score=25.60 Aligned_cols=21 Identities=24% Similarity=0.458 Sum_probs=17.5
Q ss_pred HHhcCCCcceeEEecCCCCCc
Q 041629 44 MAYDYPTEKLSVYVSDDGGSA 64 (362)
Q Consensus 44 ~a~~yp~~~~~~~~sddg~s~ 64 (362)
-|.+|-.+++.+|++.||...
T Consensus 29 ya~~~~~~~valYlTpDGkh~ 49 (60)
T d1v58a2 29 YLGKYQDMGVTIYLTPDGKHA 49 (60)
T ss_dssp EEEEETTEEEEEEECTTSSCE
T ss_pred HHHHhCCCceEEEEcCCCCEE
Confidence 367889999999999999543
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=18.52 E-value=37 Score=27.34 Aligned_cols=39 Identities=15% Similarity=0.387 Sum_probs=29.8
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchHHHH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTFFAF 70 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~~al 70 (362)
++|+. +..+|+-|++..+||. ..+.+-|||++-=|.+-+
T Consensus 10 yN~~~-~l~~~l~Si~~Qt~~~--~eiivvdd~S~d~t~~~l 48 (255)
T d1qg8a_ 10 YNKSD-YVAKSISSILSQTFSD--FELFIMDDNSNEETLNVI 48 (255)
T ss_dssp SSCTT-THHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHH
T ss_pred CCCHH-HHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHH
Confidence 35543 6789999999999994 789999999887555443
No 3
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.78 E-value=58 Score=27.31 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=30.5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcceeEEecCCCCCcchH
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTF 67 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~~~~~~sddg~s~l~~ 67 (362)
++|..-....|+-|++...||.....+-+-|||++--+.
T Consensus 31 yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~ 69 (328)
T d1xhba2 31 HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFL 69 (328)
T ss_dssp SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGG
T ss_pred cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhH
Confidence 456554556899999999999888889999999876554
No 4
>d1zfoa_ g.39.1.4 (A:) LASP-1 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=8.44 E-value=30 Score=20.04 Aligned_cols=8 Identities=63% Similarity=1.140 Sum_probs=5.7
Q ss_pred CCCcceeE
Q 041629 48 YPTEKLSV 55 (362)
Q Consensus 48 yp~~~~~~ 55 (362)
||.||+.|
T Consensus 13 Yp~Ekl~C 20 (30)
T d1zfoa_ 13 YPTEKVNC 20 (30)
T ss_dssp CGGGCCCS
T ss_pred ccHHHhhh
Confidence 77777765
No 5
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=7.88 E-value=56 Score=26.83 Aligned_cols=28 Identities=32% Similarity=0.649 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHhcCCCcceeEEecCCC
Q 041629 33 PLSVVNTALSVMAYDYPTEKLSVYVSDDG 61 (362)
Q Consensus 33 ~~~~~~~~~~~~a~~yp~~~~~~~~sddg 61 (362)
|.+.+|+--.+=-+.||.|+..| .++||
T Consensus 10 ~~~~~~~~~~~~~~~y~~e~h~v-~t~DG 37 (377)
T d1k8qa_ 10 PEVTMNISQMITYWGYPAEEYEV-VTEDG 37 (377)
T ss_dssp GGGGCCHHHHHHHTTCCCEEEEE-ECTTS
T ss_pred CCcCCCHHHHHHHcCCCceEEEE-EcCCC
Confidence 55667764444457899999766 47777
No 6
>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.58 E-value=16 Score=30.19 Aligned_cols=66 Identities=15% Similarity=0.136 Sum_probs=43.6
Q ss_pred HHHHHhcCC----C-cceeEEecCCCCCcchHHHHHHHHhhhhhcccccCCceeeecCccccccccCCCCh
Q 041629 41 LSVMAYDYP----T-EKLSVYVSDDGGSALTFFAFMEAAKFAAHWLPFCRKFNLMERNPRAYFSSSSSTST 106 (362)
Q Consensus 41 ~~~~a~~yp----~-~~~~~~~sddg~s~l~~~al~e~~~fat~~~~~~rGw~s~y~~p~~~f~GlaP~~l 106 (362)
+..++.+|. . -.-++|+.|.+|-...+.+-....||...-+.|++.=++.|.+||-+|.|..+.++
T Consensus 122 ~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~~pee~Fl~~~~~~~ 192 (195)
T d1yj5a1 122 WDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARF 192 (195)
T ss_dssp HHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEECHHHHTTCCCCCCB
T ss_pred HHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCcccCHHHHhcCCCcccC
Confidence 456677774 3 34688999987655444333334566666666676677889999888988755543
No 7
>d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=6.87 E-value=2.4e+02 Score=21.00 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=39.9
Q ss_pred eEEecCCC----------CCcchHHHHHHHHhhhhhcccccCCceee-ecCccccccccCCCChhhhhHH
Q 041629 54 SVYVSDDG----------GSALTFFAFMEAAKFAAHWLPFCRKFNLM-ERNPRAYFSSSSSTSTHACCSE 112 (362)
Q Consensus 54 ~~~~sddg----------~s~l~~~al~e~~~fat~~~~~~rGw~s~-y~~p~~~f~GlaP~~l~~~l~Q 112 (362)
-+++|+.| ...++-+.+++.+|-|+. +|.||--. -|+ -..|.+...+++...+..
T Consensus 38 l~hv~esg~~~~tVR~g~prl~S~~~iR~iadIAdK---Y~~G~lrfTtR~-NIEf~~~~~e~v~~l~~e 103 (119)
T d3c7bb2 38 IKRVAESGDVIYVVRFGTPRLLSIYTVRELCDIADK---YSDGYLRWTSRN-NVEFFVTDESKIDDLINE 103 (119)
T ss_dssp EEEEETTSCEEEEEEECCCSEEEHHHHHHHHHHHHH---HSTTEEEECTTS-CEEEEESCGGGHHHHHHH
T ss_pred EEEEcCCCCEEEEEecCCcccccHHHHHHHHHHHHH---hCcceEEeecCC-CceeecCCHHHHHHHHHH
Confidence 35677776 345788889988888886 59997542 334 577889999998887765
No 8
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.24 E-value=2e+02 Score=16.97 Aligned_cols=14 Identities=21% Similarity=0.598 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHH
Q 041629 156 IPIMVYAFLPQLAL 169 (362)
Q Consensus 156 l~~liyll~P~l~L 169 (362)
+....|++.|..+|
T Consensus 9 iAt~LFilvPt~FL 22 (36)
T d2axtm1 9 IATALFVLVPSVFL 22 (36)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555555444
No 9
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=6.17 E-value=59 Score=25.67 Aligned_cols=17 Identities=47% Similarity=0.663 Sum_probs=13.8
Q ss_pred HhcCCCcceeEEecCCCC
Q 041629 45 AYDYPTEKLSVYVSDDGG 62 (362)
Q Consensus 45 a~~yp~~~~~~~~sddg~ 62 (362)
|.||..|+++ |.|.||-
T Consensus 2 ~~~y~~e~v~-~~s~DG~ 18 (280)
T d1qfma2 2 ASDYQTVQIF-YPSKDGT 18 (280)
T ss_dssp GGGEEEEEEE-EECTTSC
T ss_pred cccCEEEEEE-EECCCCC
Confidence 5689888865 9999994
No 10
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.79 E-value=1.6e+02 Score=21.92 Aligned_cols=23 Identities=9% Similarity=-0.074 Sum_probs=17.6
Q ss_pred CCCChHHHHHHHHHHHHhcCCCcc
Q 041629 29 YKEPPLSVVNTALSVMAYDYPTEK 52 (362)
Q Consensus 29 ~~e~~~~~~~~~~~~~a~~yp~~~ 52 (362)
++|| -....++-|+++.+||.|.
T Consensus 12 yn~~-~~l~~~l~sl~~q~~~~~~ 34 (265)
T d1omza_ 12 YNRT-DLLLRLLNHYQAVPSLHKV 34 (265)
T ss_dssp SSCH-HHHHHHHHHHTTSTTEEEE
T ss_pred CCCH-HHHHHHHHHHHcCCCcCeE
Confidence 4554 4458899999999999864
Done!