Query 041631
Match_columns 358
No_of_seqs 148 out of 1508
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:32:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.1 2.3E-08 8E-13 89.6 25.1 238 68-331 15-284 (315)
2 2woz_A Kelch repeat and BTB do 99.1 4.1E-08 1.4E-12 88.1 26.3 213 95-330 50-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.1 7.5E-08 2.6E-12 85.8 26.4 237 68-332 26-280 (306)
4 1zgk_A Kelch-like ECH-associat 99.1 9.6E-08 3.3E-12 85.3 25.9 214 95-333 64-296 (308)
5 2xn4_A Kelch-like protein 2; s 99.0 9.5E-08 3.3E-12 85.0 24.3 211 96-331 56-283 (302)
6 2vpj_A Kelch-like protein 12; 99.0 1.7E-07 5.8E-12 83.2 24.5 213 95-332 56-286 (301)
7 2e31_A FBS1, F-box only protei 99.0 8.9E-11 3.1E-15 102.8 1.2 45 1-45 54-99 (297)
8 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 6.8E-11 2.3E-15 76.4 0.3 39 1-39 12-50 (53)
9 3ii7_A Kelch-like protein 7; p 98.9 2.6E-07 8.8E-12 82.3 21.4 214 112-351 25-255 (306)
10 2vpj_A Kelch-like protein 12; 98.9 9.3E-07 3.2E-11 78.4 24.3 215 112-351 32-261 (301)
11 2xn4_A Kelch-like protein 2; s 98.9 1.1E-06 3.7E-11 78.1 23.5 215 112-351 31-259 (302)
12 1zgk_A Kelch-like ECH-associat 98.9 6.1E-07 2.1E-11 80.0 22.0 217 112-351 40-270 (308)
13 2uvk_A YJHT; unknown function, 98.8 4E-07 1.4E-11 82.9 19.0 219 96-333 14-303 (357)
14 4asc_A Kelch repeat and BTB do 98.7 3.6E-06 1.2E-10 75.2 23.0 149 173-332 68-229 (315)
15 2woz_A Kelch repeat and BTB do 98.6 8.8E-06 3E-10 72.7 21.8 167 174-351 80-261 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.6 4.7E-05 1.6E-09 71.1 26.8 44 1-44 22-65 (445)
17 3v7d_B Cell division control p 98.6 0.00018 6.1E-09 67.3 30.8 40 1-40 18-58 (464)
18 2uvk_A YJHT; unknown function, 98.5 2E-05 6.9E-10 71.5 20.9 152 172-331 168-349 (357)
19 2zwa_A Leucine carboxyl methyl 98.4 2.5E-05 8.5E-10 77.7 21.6 214 100-332 396-643 (695)
20 1p22_A F-BOX/WD-repeat protein 98.4 2E-05 7E-10 73.4 19.1 43 1-43 14-60 (435)
21 3l2o_B F-box only protein 4; s 97.9 2.1E-06 7.3E-11 74.4 1.2 45 1-45 8-52 (312)
22 1k3i_A Galactose oxidase precu 97.7 0.00036 1.2E-08 68.8 12.8 217 99-332 251-505 (656)
23 2zwa_A Leucine carboxyl methyl 97.6 0.0015 5.1E-08 64.9 16.2 173 171-352 411-616 (695)
24 1k3i_A Galactose oxidase precu 97.5 0.00067 2.3E-08 66.9 12.5 191 114-330 169-384 (656)
25 2ast_B S-phase kinase-associat 97.1 8.2E-05 2.8E-09 66.8 -0.1 37 1-37 12-48 (336)
26 2p1m_B Transport inhibitor res 96.4 0.00052 1.8E-08 66.6 -0.3 31 1-31 9-40 (594)
27 3ogk_B Coronatine-insensitive 96.0 0.0011 3.6E-08 64.3 -0.1 31 1-31 16-47 (592)
28 3hfq_A Uncharacterized protein 92.1 4.4 0.00015 35.3 14.8 78 254-332 245-327 (347)
29 3scy_A Hypothetical bacterial 92.1 5.8 0.0002 34.8 15.9 118 208-331 219-346 (361)
30 2z2n_A Virginiamycin B lyase; 91.6 5.5 0.00019 33.5 19.4 187 99-328 107-299 (299)
31 3hfq_A Uncharacterized protein 90.0 9 0.00031 33.2 14.9 105 224-330 17-124 (347)
32 3mbr_X Glutamine cyclotransfer 90.0 7.9 0.00027 32.5 15.0 110 207-329 27-138 (243)
33 3dsm_A Uncharacterized protein 89.9 9.3 0.00032 33.3 18.7 114 209-329 93-217 (328)
34 3ei3_B DNA damage-binding prot 89.5 11 0.00036 33.3 20.6 192 103-327 88-285 (383)
35 3nol_A Glutamine cyclotransfer 87.0 13 0.00045 31.5 14.2 109 208-329 50-160 (262)
36 3jrp_A Fusion protein of prote 87.0 14 0.00049 31.9 15.6 66 258-326 171-242 (379)
37 3nok_A Glutaminyl cyclase; bet 85.6 14 0.00047 31.5 12.1 106 208-329 62-169 (268)
38 1l0q_A Surface layer protein; 85.5 18 0.00062 31.7 20.1 190 104-330 88-281 (391)
39 1q7f_A NHL, brain tumor CG1071 85.1 16 0.00053 30.6 20.6 112 210-333 131-247 (286)
40 2iwa_A Glutamine cyclotransfer 84.7 17 0.0006 30.8 14.1 107 211-329 32-140 (266)
41 3sjl_D Methylamine dehydrogena 84.7 14 0.00048 33.4 12.5 116 209-329 236-368 (386)
42 2dg1_A DRP35, lactonase; beta 84.5 9.1 0.00031 33.0 11.2 113 209-330 54-177 (333)
43 3hrp_A Uncharacterized protein 84.3 13 0.00045 33.6 12.5 109 209-330 140-255 (409)
44 3g4e_A Regucalcin; six bladed 84.2 18 0.00063 30.7 13.6 110 206-329 18-143 (297)
45 2z2n_A Virginiamycin B lyase; 83.2 17 0.00059 30.2 12.2 110 210-333 151-263 (299)
46 3e5z_A Putative gluconolactona 82.5 21 0.00072 30.1 21.2 194 103-333 42-255 (296)
47 3tc9_A Hypothetical hydrolase; 82.4 29 0.001 31.6 14.2 111 210-330 149-263 (430)
48 1ri6_A Putative isomerase YBHE 82.2 20 0.0007 30.4 12.5 111 210-330 48-167 (343)
49 2p4o_A Hypothetical protein; p 82.1 23 0.00079 30.3 13.2 106 209-326 41-149 (306)
50 4gga_A P55CDC, cell division c 81.9 28 0.00096 31.1 20.4 203 95-332 109-318 (420)
51 3nol_A Glutamine cyclotransfer 81.8 23 0.00079 30.0 14.1 137 171-330 64-207 (262)
52 4hw6_A Hypothetical protein, I 81.4 27 0.00091 31.9 13.3 113 203-327 140-262 (433)
53 3nok_A Glutaminyl cyclase; bet 81.3 24 0.00083 30.0 14.5 109 207-330 102-216 (268)
54 2aq5_A Coronin-1A; WD40 repeat 80.4 31 0.001 30.5 21.4 115 210-331 187-308 (402)
55 2qc5_A Streptogramin B lactona 80.4 23 0.00078 29.5 11.9 112 206-331 24-140 (300)
56 4aez_A CDC20, WD repeat-contai 80.1 31 0.0011 30.5 22.9 191 101-330 103-299 (401)
57 2ghs_A AGR_C_1268P; regucalcin 79.5 28 0.00096 30.0 12.4 105 211-330 61-174 (326)
58 3mbr_X Glutamine cyclotransfer 78.8 28 0.00095 29.1 14.0 138 171-330 42-185 (243)
59 1rwi_B Serine/threonine-protei 78.6 23 0.00077 29.1 11.2 107 210-330 77-186 (270)
60 3q7m_A Lipoprotein YFGL, BAMB; 78.2 35 0.0012 29.9 13.9 109 206-328 49-166 (376)
61 3bws_A Protein LP49; two-domai 77.8 25 0.00086 31.3 12.0 112 210-329 133-248 (433)
62 1l0q_A Surface layer protein; 77.5 36 0.0012 29.7 23.5 189 104-331 4-196 (391)
63 3fvz_A Peptidyl-glycine alpha- 76.5 34 0.0012 29.4 12.1 162 101-280 154-322 (329)
64 1k8k_C P40, ARP2/3 complex 41 76.1 35 0.0012 29.3 12.2 96 226-326 31-129 (372)
65 3m0c_C LDL receptor, low-densi 75.8 67 0.0023 32.0 22.4 158 171-347 492-657 (791)
66 2mad_H Methylamine dehydrogena 75.6 43 0.0015 29.7 14.1 58 273-330 298-356 (373)
67 3o4h_A Acylamino-acid-releasin 74.9 56 0.0019 30.7 17.5 187 102-330 123-320 (582)
68 4e54_B DNA damage-binding prot 74.9 44 0.0015 30.0 12.8 194 103-328 134-331 (435)
69 3dwl_C Actin-related protein 2 74.7 39 0.0013 29.3 12.1 96 226-327 123-239 (377)
70 1rwi_B Serine/threonine-protei 74.5 34 0.0012 28.0 18.9 186 100-327 76-267 (270)
71 3dsm_A Uncharacterized protein 73.5 44 0.0015 28.8 21.2 192 100-328 52-257 (328)
72 1ri6_A Putative isomerase YBHE 73.4 41 0.0014 28.4 17.4 106 226-332 201-318 (343)
73 3jrp_A Fusion protein of prote 72.6 45 0.0015 28.6 12.0 65 259-326 69-136 (379)
74 2hqs_A Protein TOLB; TOLB, PAL 71.8 56 0.0019 29.3 19.2 185 112-331 160-351 (415)
75 3dr2_A Exported gluconolactona 71.8 16 0.00055 31.2 8.5 110 210-331 55-185 (305)
76 3v9f_A Two-component system se 71.8 80 0.0027 31.0 19.6 140 179-332 473-619 (781)
77 3e5z_A Putative gluconolactona 71.6 44 0.0015 28.0 18.7 103 210-329 182-291 (296)
78 3jro_A Fusion protein of prote 71.6 80 0.0027 31.0 18.0 65 259-326 170-240 (753)
79 2fp8_A Strictosidine synthase; 71.0 45 0.0015 28.5 11.4 116 206-330 23-180 (322)
80 3u4y_A Uncharacterized protein 70.8 48 0.0016 28.0 20.4 115 208-331 184-311 (331)
81 1pjx_A Dfpase, DIISOPROPYLFLUO 68.5 45 0.0015 27.9 10.7 113 209-330 27-167 (314)
82 3v65_B Low-density lipoprotein 67.8 67 0.0023 28.6 21.5 209 99-346 125-342 (386)
83 4e54_B DNA damage-binding prot 67.5 69 0.0024 28.6 16.6 56 270-329 377-435 (435)
84 3no2_A Uncharacterized protein 66.8 48 0.0016 27.9 10.4 112 206-327 83-198 (276)
85 3u4y_A Uncharacterized protein 66.0 60 0.002 27.4 22.3 180 112-327 21-210 (331)
86 3fm0_A Protein CIAO1; WDR39,SG 66.0 65 0.0022 27.8 15.8 62 258-322 161-223 (345)
87 3fm0_A Protein CIAO1; WDR39,SG 65.4 66 0.0023 27.7 11.4 65 258-325 72-137 (345)
88 3mmy_A MRNA export factor; mRN 65.3 64 0.0022 27.4 11.3 71 259-332 54-125 (368)
89 3v7d_B Cell division control p 65.0 78 0.0027 28.3 15.5 94 226-330 333-427 (464)
90 3lrv_A PRE-mRNA-splicing facto 64.5 66 0.0022 27.6 11.2 94 226-327 150-247 (343)
91 1q7f_A NHL, brain tumor CG1071 62.7 65 0.0022 26.6 22.6 103 210-324 174-280 (286)
92 1n7d_A LDL receptor, low-densi 61.6 84 0.0029 30.7 12.2 110 210-331 507-621 (699)
93 2hqs_A Protein TOLB; TOLB, PAL 61.2 91 0.0031 27.8 21.8 188 112-333 204-396 (415)
94 4gga_A P55CDC, cell division c 60.9 90 0.0031 27.7 12.9 89 237-330 94-184 (420)
95 3q7m_A Lipoprotein YFGL, BAMB; 60.5 85 0.0029 27.3 20.1 190 97-328 99-300 (376)
96 3vgz_A Uncharacterized protein 60.3 78 0.0027 26.8 26.4 205 101-330 100-309 (353)
97 3v65_B Low-density lipoprotein 60.2 93 0.0032 27.6 20.2 110 209-331 169-284 (386)
98 3jro_A Fusion protein of prote 59.5 88 0.003 30.7 12.1 95 226-325 32-133 (753)
99 1k8k_C P40, ARP2/3 complex 41 59.5 83 0.0028 26.8 20.0 70 258-330 153-239 (372)
100 3sov_A LRP-6, low-density lipo 59.2 47 0.0016 28.7 9.1 108 210-330 46-160 (318)
101 3mmy_A MRNA export factor; mRN 59.1 82 0.0028 26.7 19.9 59 270-329 237-309 (368)
102 1nir_A Nitrite reductase; hemo 57.4 1.3E+02 0.0043 28.2 13.5 110 210-330 148-263 (543)
103 1yfq_A Cell cycle arrest prote 55.8 92 0.0031 26.2 19.7 99 226-330 171-288 (342)
104 1nir_A Nitrite reductase; hemo 55.7 1.3E+02 0.0046 28.1 21.7 195 100-330 147-361 (543)
105 3lrv_A PRE-mRNA-splicing facto 55.3 99 0.0034 26.4 11.8 68 258-328 138-205 (343)
106 3v64_C Agrin; beta propeller, 55.0 1.1E+02 0.0037 26.7 21.7 210 98-346 81-299 (349)
107 3g4e_A Regucalcin; six bladed 54.8 94 0.0032 26.0 23.9 195 99-333 22-239 (297)
108 1npe_A Nidogen, entactin; glyc 54.7 88 0.003 25.6 21.8 194 98-330 44-244 (267)
109 3bws_A Protein LP49; two-domai 54.7 1.1E+02 0.0038 26.9 22.9 196 99-330 178-396 (433)
110 4gqb_B Methylosome protein 50; 54.6 1.1E+02 0.0036 26.6 16.8 98 226-330 193-295 (344)
111 2qc5_A Streptogramin B lactona 54.5 89 0.003 25.6 19.4 193 96-331 25-224 (300)
112 1kb0_A Quinohemoprotein alcoho 54.5 1.1E+02 0.0038 29.7 11.7 112 206-328 73-203 (677)
113 4a11_B DNA excision repair pro 54.0 1.1E+02 0.0037 26.4 16.9 69 258-330 256-329 (408)
114 1jmx_B Amine dehydrogenase; ox 53.6 93 0.0032 26.2 10.2 69 258-329 10-79 (349)
115 3p5b_L Low density lipoprotein 53.3 1.2E+02 0.0042 27.0 21.7 127 210-346 213-344 (400)
116 3gre_A Serine/threonine-protei 53.2 1.2E+02 0.0039 26.9 11.1 100 226-330 193-298 (437)
117 1yiq_A Quinohemoprotein alcoho 52.8 1.5E+02 0.0052 28.7 12.4 112 206-328 66-196 (689)
118 1kv9_A Type II quinohemoprotei 51.8 1.6E+02 0.0055 28.4 12.3 112 206-328 62-191 (668)
119 3scy_A Hypothetical bacterial 51.5 1.2E+02 0.0039 26.1 14.8 73 258-331 221-300 (361)
120 4ggc_A P55CDC, cell division c 51.3 1E+02 0.0035 25.5 13.6 60 270-330 44-104 (318)
121 1npe_A Nidogen, entactin; glyc 51.3 1E+02 0.0034 25.3 16.8 110 210-330 90-204 (267)
122 3hrp_A Uncharacterized protein 50.3 1.4E+02 0.0048 26.7 14.8 112 210-332 230-362 (409)
123 3dwl_C Actin-related protein 2 49.9 35 0.0012 29.6 6.7 96 226-326 34-133 (377)
124 1jmx_B Amine dehydrogenase; ox 49.2 1.2E+02 0.004 25.5 12.1 110 209-326 9-136 (349)
125 1yr2_A Prolyl oligopeptidase; 48.8 2E+02 0.0068 28.0 15.3 113 210-330 327-447 (741)
126 4g56_B MGC81050 protein; prote 47.9 1.4E+02 0.0047 25.8 14.0 67 259-330 239-307 (357)
127 1gxr_A ESG1, transducin-like e 47.6 1.2E+02 0.0041 25.2 23.8 199 99-331 60-262 (337)
128 1pby_B Quinohemoprotein amine 47.3 1.2E+02 0.0042 25.2 11.0 96 225-329 219-315 (337)
129 3sov_A LRP-6, low-density lipo 46.7 1.4E+02 0.0048 25.6 21.2 125 210-346 133-262 (318)
130 2fp8_A Strictosidine synthase; 46.4 1.3E+02 0.0046 25.4 13.9 54 225-280 260-313 (322)
131 2ojh_A Uncharacterized protein 45.5 1.2E+02 0.0041 24.5 19.6 200 99-331 50-265 (297)
132 3v9f_A Two-component system se 45.1 2.3E+02 0.0079 27.7 20.9 110 210-331 417-531 (781)
133 3f3f_A Nucleoporin SEH1; struc 43.6 1.4E+02 0.0048 24.7 14.6 65 259-326 71-145 (351)
134 3v64_C Agrin; beta propeller, 41.4 1.8E+02 0.006 25.3 21.6 111 209-331 126-241 (349)
135 2dk7_A Transcription elongatio 41.2 23 0.00079 23.3 2.9 19 306-326 23-41 (73)
136 2hz6_A Endoplasmic reticulum t 41.0 10 0.00035 33.8 1.7 26 206-236 5-30 (369)
137 2z3z_A Dipeptidyl aminopeptida 41.0 2.4E+02 0.0084 26.8 19.2 118 210-331 268-398 (706)
138 3dm0_A Maltose-binding peripla 40.9 2.1E+02 0.0073 27.3 11.4 94 226-329 542-637 (694)
139 4aez_A CDC20, WD repeat-contai 40.9 1.8E+02 0.0062 25.3 22.6 99 225-329 284-385 (401)
140 3vgz_A Uncharacterized protein 40.1 1.7E+02 0.0057 24.6 21.9 110 210-330 151-268 (353)
141 3dr2_A Exported gluconolactona 39.6 1.7E+02 0.0057 24.5 19.7 102 225-334 169-277 (305)
142 2oiz_A Aromatic amine dehydrog 39.2 1.9E+02 0.0065 25.1 10.9 57 273-332 286-342 (361)
143 3ow8_A WD repeat-containing pr 38.7 1.8E+02 0.0061 24.6 10.0 59 270-329 57-116 (321)
144 2iwa_A Glutamine cyclotransfer 38.6 1.8E+02 0.006 24.5 15.1 139 171-330 43-187 (266)
145 2pm9_A Protein WEB1, protein t 38.5 1.9E+02 0.0066 24.9 13.9 65 258-327 274-340 (416)
146 3k26_A Polycomb protein EED; W 37.4 1.8E+02 0.0063 24.3 18.3 63 259-324 299-366 (366)
147 2ad6_A Methanol dehydrogenase 36.7 2.7E+02 0.0094 26.1 13.1 113 206-328 58-189 (571)
148 3hxj_A Pyrrolo-quinoline quino 34.1 2E+02 0.0069 23.9 10.6 29 210-243 147-175 (330)
149 4aow_A Guanine nucleotide-bind 34.1 2E+02 0.0069 23.8 18.7 92 226-326 238-339 (340)
150 2hes_X YDR267CP; beta-propelle 33.6 2E+02 0.007 24.2 9.1 69 258-329 118-189 (330)
151 1r5m_A SIR4-interacting protei 33.4 2.3E+02 0.0079 24.3 19.2 188 99-324 215-425 (425)
152 2pm7_B Protein transport prote 32.4 1.6E+02 0.0054 24.4 8.0 64 259-325 67-133 (297)
153 2bkl_A Prolyl endopeptidase; m 32.2 3.4E+02 0.012 25.9 20.5 140 179-331 256-404 (695)
154 2vdu_B TRNA (guanine-N(7)-)-me 32.0 2.7E+02 0.0093 24.7 19.9 201 93-330 7-277 (450)
155 1qks_A Cytochrome CD1 nitrite 31.9 3.3E+02 0.011 25.6 21.1 196 101-330 166-379 (567)
156 2dg1_A DRP35, lactonase; beta 31.6 2.3E+02 0.0078 23.7 20.3 206 99-333 53-272 (333)
157 3vl1_A 26S proteasome regulato 31.4 2.6E+02 0.0087 24.2 13.0 97 226-330 120-218 (420)
158 1qks_A Cytochrome CD1 nitrite 31.4 3.4E+02 0.011 25.6 13.2 99 225-330 177-281 (567)
159 4a0p_A LRP6, LRP-6, low-densit 30.7 3.6E+02 0.012 25.7 20.2 208 98-346 45-261 (628)
160 4gqb_B Methylosome protein 50; 30.4 2.6E+02 0.0089 24.0 11.1 60 270-330 102-164 (344)
161 3mkq_A Coatomer beta'-subunit; 30.1 3.8E+02 0.013 25.8 18.7 97 226-329 120-222 (814)
162 2be1_A Serine/threonine-protei 30.0 1.8E+02 0.006 25.5 7.9 28 302-331 110-137 (339)
163 1got_B GT-beta; complex (GTP-b 29.4 2.6E+02 0.0088 23.6 14.9 96 226-329 78-178 (340)
164 4ggc_A P55CDC, cell division c 29.3 2.3E+02 0.008 23.1 20.5 72 258-332 161-238 (318)
165 1jof_A Carboxy-CIS,CIS-muconat 29.2 2.7E+02 0.0093 23.8 12.9 115 209-330 154-298 (365)
166 3vl1_A 26S proteasome regulato 28.8 2.8E+02 0.0097 23.9 22.2 70 258-332 258-332 (420)
167 1ddw_A GLGF-domain protein hom 28.8 1.1E+02 0.0037 22.3 5.3 38 113-161 13-51 (120)
168 1nr0_A Actin interacting prote 28.8 2E+02 0.0067 27.1 8.7 64 258-324 459-522 (611)
169 3i2n_A WD repeat-containing pr 28.5 2.6E+02 0.0088 23.3 12.8 105 209-326 178-293 (357)
170 1evh_A WH1 domain, protein (ME 28.5 91 0.0031 22.4 4.8 40 113-161 13-52 (112)
171 2ovr_B FBW7, F-BOX/WD repeat p 28.4 3.1E+02 0.01 24.2 22.2 111 206-330 284-397 (445)
172 3bg1_A Protein SEC13 homolog; 27.5 2.3E+02 0.0078 23.7 8.2 69 258-329 24-95 (316)
173 3dw8_B Serine/threonine-protei 26.8 3.2E+02 0.011 23.8 11.3 101 226-331 250-380 (447)
174 1yfq_A Cell cycle arrest prote 26.6 2.7E+02 0.0094 23.0 11.3 72 258-332 22-97 (342)
175 2qe8_A Uncharacterized protein 26.6 3E+02 0.01 23.4 9.6 75 206-280 71-154 (343)
176 3m0c_C LDL receptor, low-densi 26.6 4.8E+02 0.016 25.8 22.6 111 210-332 482-597 (791)
177 3i2n_A WD repeat-containing pr 26.5 2.8E+02 0.0096 23.1 20.2 66 258-325 270-354 (357)
178 3c75_H MADH, methylamine dehyd 26.3 3.6E+02 0.012 24.3 13.1 73 258-330 330-408 (426)
179 4a2l_A BT_4663, two-component 25.6 4.7E+02 0.016 25.4 20.9 111 210-331 273-393 (795)
180 2xzh_A Clathrin heavy chain 1; 25.4 1.9E+02 0.0065 25.6 7.0 41 294-336 259-303 (365)
181 4aow_A Guanine nucleotide-bind 25.0 2.9E+02 0.01 22.8 14.0 95 226-329 196-291 (340)
182 3ow8_A WD repeat-containing pr 24.9 3.1E+02 0.011 23.0 13.8 96 226-330 187-285 (321)
183 2xe4_A Oligopeptidase B; hydro 24.9 4.9E+02 0.017 25.3 11.0 118 210-331 330-465 (751)
184 2lyd_A Decapping protein 1; DC 24.7 63 0.0022 24.1 3.4 29 305-335 30-58 (134)
185 2w18_A PALB2, fancn, partner a 24.5 2.9E+02 0.01 24.3 8.2 64 259-327 53-147 (356)
186 1erj_A Transcriptional repress 24.0 3.5E+02 0.012 23.4 21.9 101 226-329 230-346 (393)
187 1ijq_A LDL receptor, low-densi 23.4 3.4E+02 0.011 22.9 21.6 110 209-331 87-202 (316)
188 3no2_A Uncharacterized protein 23.3 3.2E+02 0.011 22.6 14.4 114 207-333 44-164 (276)
189 1e0n_A Hypothetical protein; Y 23.1 68 0.0023 16.4 2.3 14 314-327 9-22 (27)
190 2xdw_A Prolyl endopeptidase; a 23.1 5E+02 0.017 24.8 16.0 117 207-330 293-422 (710)
191 3bg1_A Protein SEC13 homolog; 22.9 3.3E+02 0.011 22.6 9.5 64 259-325 71-137 (316)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 22.4 3.2E+02 0.011 22.3 21.1 192 111-332 46-265 (314)
193 1pgu_A Actin interacting prote 21.8 4.6E+02 0.016 23.9 13.2 135 210-358 218-359 (615)
194 3f3f_A Nucleoporin SEH1; struc 21.8 3.3E+02 0.011 22.2 19.2 33 298-331 312-345 (351)
195 1egx_A VAsp, vasodilator-stimu 21.7 1.4E+02 0.0048 21.5 4.7 41 113-161 13-53 (115)
196 3c5m_A Oligogalacturonate lyas 21.1 3.2E+02 0.011 23.2 8.1 102 225-332 216-337 (396)
197 4a2l_A BT_4663, two-component 20.9 5.8E+02 0.02 24.8 21.6 208 97-331 221-443 (795)
198 3kvp_A Uncharacterized protein 20.7 84 0.0029 20.3 2.8 17 315-331 40-56 (72)
199 4ery_A WD repeat-containing pr 20.6 3.5E+02 0.012 22.1 21.3 96 226-330 130-229 (312)
200 3p5b_L Low density lipoprotein 20.6 4.4E+02 0.015 23.2 20.6 112 209-332 169-285 (400)
201 3gre_A Serine/threonine-protei 20.5 4.2E+02 0.014 23.0 9.3 67 258-329 181-250 (437)
202 3s94_A LRP-6, low-density lipo 20.3 5.6E+02 0.019 24.3 21.4 194 98-330 357-557 (619)
203 2hes_X YDR267CP; beta-propelle 20.3 3.8E+02 0.013 22.4 10.5 59 270-330 220-286 (330)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.15 E-value=2.3e-08 Score=89.62 Aligned_cols=238 Identities=10% Similarity=0.002 Sum_probs=139.7
Q ss_pred ceeeccCCCccccccCcCCCCCCCCccEEeeeecceEEEeecC--------C----eeEEEecCccceecCCCCCCCCCC
Q 041631 68 DLSCMFPDETLADLSVQDLDHQQPATGVLGGPYDGIYCIFGLR--------D----RITLWNVATRDSRTLPNYGPTCPP 135 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~~GLl~l~~~~--------~----~~~V~NP~T~~~~~LP~~~~~~~~ 135 (358)
...|++..+.|.. ..++.|.+.........+|.|.+..+. . .++++||.|++|..+|+.+..
T Consensus 15 ~~~yd~~~~~W~~---~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--- 88 (315)
T 4asc_A 15 AVAYDPAANECYC---ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP--- 88 (315)
T ss_dssp EEEEETTTTEEEE---EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC---
T ss_pred eEEECCCCCeEec---CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc---
Confidence 4555555555522 222222222234444556666555431 1 148899999999999876632
Q ss_pred CCCcccceEEEeeeCCCCCEEEEEEEEEec-CCCcccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEE
Q 041631 136 NTKVYKTSVGFGLDPNRNDYKLIMIYTYWD-ERTTELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCH 214 (358)
Q Consensus 136 ~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~-~~~~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~ly 214 (358)
+....+.. ++ + +++.+..... ........++ +|+..+++|+..+. +|..... ..++.++|.+|
T Consensus 89 ---r~~~~~~~-~~----~-~lyv~GG~~~~~~~~~~~~~~---~~d~~~~~W~~~~~---~p~~r~~-~~~~~~~~~iy 152 (315)
T 4asc_A 89 ---RCLFGLGE-AL----N-SIYVVGGREIKDGERCLDSVM---CYDRLSFKWGESDP---LPYVVYG-HTVLSHMDLVY 152 (315)
T ss_dssp ---EESCEEEE-ET----T-EEEEECCEESSTTCCBCCCEE---EEETTTTEEEECCC---CSSCCBS-CEEEEETTEEE
T ss_pred ---hhceeEEE-EC----C-EEEEEeCCcCCCCCcccceEE---EECCCCCcEeECCC---CCCcccc-eeEEEECCEEE
Confidence 11122111 11 2 4444433221 1123355678 99999999999874 3321112 23778999999
Q ss_pred EEEeecC--CCceEEEEEECCCceEEEec-CCCCcccccccceeEECCeEEEEEecCCC-cEEEEEEECC--CeeeEEEE
Q 041631 215 WLWELED--SKHKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLYHDSLSLLFLNTTN-NHYEIWVLKE--RIWSKHLS 288 (358)
Q Consensus 215 wl~~~~~--~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~~g~L~~~~~~~~~-~~l~IW~l~~--~~W~~~~~ 288 (358)
.+..... .....+..||+.+.+|+.++ +|.... ....+..+|+|.++...... ..-.+|+++- ..|+.+..
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS---LFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB---SCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh---ceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 8875421 22457999999999999874 343221 12566779999998854332 2347788776 89998754
Q ss_pred EccCCccceEEEeeCCcEEEEecCC-------------CCEEEEEeCCCCcEEEee
Q 041631 289 VTLLGVEEPLGVWNNGGFFVQSDSR-------------PRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 289 i~~~~~~~p~~~~~~g~i~~~~~~~-------------~~~l~~yd~~t~~~~~v~ 331 (358)
++......-.+ .-+++|++..+.. ...+..||+++++|+++.
T Consensus 230 ~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 230 FPQERSSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp CSSCCBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCCcccceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 32211222222 2366777765410 135889999999999993
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.14 E-value=4.1e-08 Score=88.14 Aligned_cols=213 Identities=10% Similarity=0.066 Sum_probs=129.6
Q ss_pred EEeeeecceEEEeecC-----C-------eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEE
Q 041631 95 VLGGPYDGIYCIFGLR-----D-------RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYT 162 (358)
Q Consensus 95 ~~~~s~~GLl~l~~~~-----~-------~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 162 (358)
......+|.|.+..+. . ..+++||.|++|..+|+.+.. +....+.. ++ + +++.+..
T Consensus 50 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~------r~~~~~~~-~~----~-~iyv~GG 117 (318)
T 2woz_A 50 SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA------RCLFGLGE-VD----D-KIYVVAG 117 (318)
T ss_dssp EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC------BCSCEEEE-ET----T-EEEEEEE
T ss_pred eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc------ccccceEE-EC----C-EEEEEcC
Confidence 4445556766555441 0 157899999999999876632 11122111 11 2 4444443
Q ss_pred EecCCCcccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecC--CCceEEEEEECCCceEEEe
Q 041631 163 YWDERTTELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELED--SKHKIIISFDMANEVFQEV 240 (358)
Q Consensus 163 ~~~~~~~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~il~fD~~~e~~~~i 240 (358)
...........++ +|+..+++|+..+. +|...... .++.++|.+|.+..... .....+..||+.+.+|+.+
T Consensus 118 ~~~~~~~~~~~~~---~yd~~~~~W~~~~~---~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 190 (318)
T 2woz_A 118 KDLQTEASLDSVL---CYDPVAAKWSEVKN---LPIKVYGH-NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL 190 (318)
T ss_dssp EBTTTCCEEEEEE---EEETTTTEEEEECC---CSSCEESC-EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEE
T ss_pred ccCCCCcccceEE---EEeCCCCCEeECCC---CCCccccc-EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC
Confidence 3211122345677 99999999999874 22211222 26779999998775321 1235699999999999988
Q ss_pred cC-CCCcccccccceeEECCeEEEEEecCCC-cEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecCC---
Q 041631 241 QC-PDIASSAYMETLDLYHDSLSLLFLNTTN-NHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSR--- 313 (358)
Q Consensus 241 ~~-P~~~~~~~~~~L~~~~g~L~~~~~~~~~-~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~--- 313 (358)
+- |.... ....+..+|+|.++...... ..-.+|+++- ..|+++..++......-.. .-+++|++..+..
T Consensus 191 ~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~ 266 (318)
T 2woz_A 191 APMKTPRS---MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-SLAGSLYAIGGFAMIQ 266 (318)
T ss_dssp CCCSSCCB---SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-EETTEEEEECCBCCBC
T ss_pred CCCCCCcc---cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-EECCEEEEECCeeccC
Confidence 43 33221 12456779999998843222 2346777765 8899875443211222222 3467777775410
Q ss_pred ----------CCEEEEEeCCCCcEEEe
Q 041631 314 ----------PRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 314 ----------~~~l~~yd~~t~~~~~v 330 (358)
...+..||+++++|+++
T Consensus 267 ~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 267 LESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCceeccceeeeEEEEeCCCCEehhh
Confidence 24689999999999999
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.11 E-value=7.5e-08 Score=85.83 Aligned_cols=237 Identities=14% Similarity=0.035 Sum_probs=139.9
Q ss_pred ceeeccCCCccccccCcCCCCCCCCccEEeeeecceEEEeecC-----CeeEEEecCccceecCCCCCCCCCCCCCcccc
Q 041631 68 DLSCMFPDETLADLSVQDLDHQQPATGVLGGPYDGIYCIFGLR-----DRITLWNVATRDSRTLPNYGPTCPPNTKVYKT 142 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~~GLl~l~~~~-----~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~ 142 (358)
...|.+..+.|..- ..++.+. ........+|.|.+..+. +.+.++||.|++|..+|+.+.. +...
T Consensus 26 ~~~~d~~~~~W~~~--~~~p~~r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~------r~~~ 95 (306)
T 3ii7_A 26 CRYFNPKDYSWTDI--RCPFEKR--RDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP------RDSL 95 (306)
T ss_dssp EEEEETTTTEEEEC--CCCSCCC--BSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC------CBSC
T ss_pred EEEecCCCCCEecC--CCCCccc--ceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc------ccce
Confidence 55666555555211 2222232 224445567777666542 2358999999999999876532 1111
Q ss_pred eEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCC
Q 041631 143 SVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS 222 (358)
Q Consensus 143 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~ 222 (358)
.+. .++ + +++.+..... .......++ +|+..+++|+..+. +|... ....++.++|.+|.+......
T Consensus 96 ~~~-~~~----~-~iyv~GG~~~-~~~~~~~~~---~~d~~~~~W~~~~~---~p~~r-~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 96 AAC-AAE----G-KIYTSGGSEV-GNSALYLFE---CYDTRTESWHTKPS---MLTQR-CSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp EEE-EET----T-EEEEECCBBT-TBSCCCCEE---EEETTTTEEEEECC---CSSCC-BSCEEEEETTEEEEECCEESC
T ss_pred eEE-EEC----C-EEEEECCCCC-CCcEeeeEE---EEeCCCCceEeCCC---CcCCc-ceeEEEEECCEEEEECCCCCC
Confidence 111 111 1 3444432211 112345678 99999999999864 22211 122377889999987754321
Q ss_pred -C----ceEEEEEECCCceEEEec-CCCCcccccccceeEECCeEEEEEecCCC-cEEEEEEECC--CeeeEEEEEccCC
Q 041631 223 -K----HKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLYHDSLSLLFLNTTN-NHYEIWVLKE--RIWSKHLSVTLLG 293 (358)
Q Consensus 223 -~----~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~~g~L~~~~~~~~~-~~l~IW~l~~--~~W~~~~~i~~~~ 293 (358)
. ...+..||+.+++|+.++ +|.... ...++.++|+|.++...... ..-.+|+++- ..|+++..++. +
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~ 237 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIEARK---NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW-K 237 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSSCCB---SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC-C
T ss_pred CCcccccceEEEeCCCCCeEEECCCccchhh---cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC-C
Confidence 1 457999999999999985 333221 22566779999888643221 1235666665 89998754332 2
Q ss_pred ccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEEEeee
Q 041631 294 VEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 294 ~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~~v~~ 332 (358)
-...-.+.-++.|++..+. ....+..||+++++|+.+..
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 1222222237778877641 23579999999999999864
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.08 E-value=9.6e-08 Score=85.31 Aligned_cols=214 Identities=11% Similarity=0.098 Sum_probs=130.1
Q ss_pred EEeeeecceEEEeecC----------CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEe
Q 041631 95 VLGGPYDGIYCIFGLR----------DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYW 164 (358)
Q Consensus 95 ~~~~s~~GLl~l~~~~----------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~ 164 (358)
......+|.|.+..+. +.++++||.|++|..+|+.+.. +....+.. ++ + +++.+....
T Consensus 64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~------r~~~~~~~-~~----~-~iyv~GG~~ 131 (308)
T 1zgk_A 64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP------RNRIGVGV-ID----G-HIYAVGGSH 131 (308)
T ss_dssp CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC------CBTCEEEE-ET----T-EEEEECCEE
T ss_pred ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC------ccccEEEE-EC----C-EEEEEcCCC
Confidence 3344557777666443 1359999999999999876532 11122111 12 1 344443222
Q ss_pred cCCCcccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecC-CCceEEEEEECCCceEEEecC-
Q 041631 165 DERTTELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELED-SKHKIIISFDMANEVFQEVQC- 242 (358)
Q Consensus 165 ~~~~~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i~~- 242 (358)
.. .....++ +|+..+++|+..+. +|..... ..++.++|.+|.+..... .....+..||+.+++|+.++-
T Consensus 132 ~~--~~~~~~~---~yd~~~~~W~~~~~---~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 202 (308)
T 1zgk_A 132 GC--IHHNSVE---RYEPERDEWHLVAP---MLTRRIG-VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM 202 (308)
T ss_dssp TT--EECCCEE---EEETTTTEEEECCC---CSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC
T ss_pred CC--cccccEE---EECCCCCeEeECCC---CCccccc-eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC
Confidence 11 2245678 99999999999874 2221112 236778999998764332 124579999999999998743
Q ss_pred CCCcccccccceeEECCeEEEEEecCC-CcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCC
Q 041631 243 PDIASSAYMETLDLYHDSLSLLFLNTT-NNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPR 315 (358)
Q Consensus 243 P~~~~~~~~~~L~~~~g~L~~~~~~~~-~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~ 315 (358)
|.... ....+..+|+|.++..... ...-.+|+++- ..|+++..++. +-...-.+.-+++|++..+. ...
T Consensus 203 p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~ 278 (308)
T 1zgk_A 203 NTIRS---GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH-RRSALGITVHQGRIYVLGGYDGHTFLD 278 (308)
T ss_dssp SSCCB---SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSCBCC
T ss_pred CCccc---cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC-CccceEEEEECCEEEEEcCcCCCcccc
Confidence 33221 1245667999988874322 22345666664 89998764322 21112222236778887541 135
Q ss_pred EEEEEeCCCCcEEEeeec
Q 041631 316 RLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 316 ~l~~yd~~t~~~~~v~~~ 333 (358)
.+..||+++++|+++...
T Consensus 279 ~v~~yd~~~~~W~~~~~~ 296 (308)
T 1zgk_A 279 SVECYDPDTDTWSEVTRM 296 (308)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEcCCCCEEeecCCC
Confidence 799999999999999643
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.05 E-value=9.5e-08 Score=84.96 Aligned_cols=211 Identities=11% Similarity=0.125 Sum_probs=129.2
Q ss_pred EeeeecceEEEeecC------CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCc
Q 041631 96 LGGPYDGIYCIFGLR------DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTT 169 (358)
Q Consensus 96 ~~~s~~GLl~l~~~~------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~ 169 (358)
.....+|.|.+..+. +...++||.|++|..+|+.+.. +....+.. ++ + +++.+..... ..
T Consensus 56 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~------r~~~~~~~-~~----~-~iyv~GG~~~--~~ 121 (302)
T 2xn4_A 56 GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR------RSTLGAAV-LN----G-LLYAVGGFDG--ST 121 (302)
T ss_dssp EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC------CBSCEEEE-ET----T-EEEEEEEECS--SC
T ss_pred eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc------ccceEEEE-EC----C-EEEEEcCCCC--Cc
Confidence 344557777666432 2359999999999999976532 11122111 11 2 3444433322 12
Q ss_pred ccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCC---ceEEEEEECCCceEEEecC-CCC
Q 041631 170 ELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSK---HKIIISFDMANEVFQEVQC-PDI 245 (358)
Q Consensus 170 ~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~---~~~il~fD~~~e~~~~i~~-P~~ 245 (358)
....++ +|+..+++|+..+. +|..... ..++.++|.+|.+....... ...+..||+.+++|+.+.- |..
T Consensus 122 ~~~~~~---~~d~~~~~W~~~~~---~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 194 (302)
T 2xn4_A 122 GLSSVE---AYNIKSNEWFHVAP---MNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194 (302)
T ss_dssp EEEEEE---EEETTTTEEEEECC---CSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC
T ss_pred cCceEE---EEeCCCCeEeecCC---CCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc
Confidence 345678 99999999999874 2221112 22678899999876433211 3469999999999998843 332
Q ss_pred cccccccceeEECCeEEEEEecCCC-cEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEE
Q 041631 246 ASSAYMETLDLYHDSLSLLFLNTTN-NHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLL 318 (358)
Q Consensus 246 ~~~~~~~~L~~~~g~L~~~~~~~~~-~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~ 318 (358)
.. ...++..+|+|.++...... ..-.+|+++- ..|+++..+.......-.+ .-++.|++..+. ....+.
T Consensus 195 r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~ 270 (302)
T 2xn4_A 195 RS---GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVE 270 (302)
T ss_dssp CB---SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEE
T ss_pred cc---cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEE
Confidence 21 12566779999988743221 1235666665 8999876443221222222 237778887542 124599
Q ss_pred EEeCCCCcEEEee
Q 041631 319 LYDPNTQEMRDLG 331 (358)
Q Consensus 319 ~yd~~t~~~~~v~ 331 (358)
.||+++++|+.+.
T Consensus 271 ~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 271 YYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTTTEEEECS
T ss_pred EEcCCCCeEEECC
Confidence 9999999999985
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.01 E-value=1.7e-07 Score=83.24 Aligned_cols=213 Identities=10% Similarity=0.059 Sum_probs=128.6
Q ss_pred EEeeeecceEEEeecC------CeeEEEecCccc---eecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEec
Q 041631 95 VLGGPYDGIYCIFGLR------DRITLWNVATRD---SRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWD 165 (358)
Q Consensus 95 ~~~~s~~GLl~l~~~~------~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~ 165 (358)
......+|.|.+..+. +.++++||.|++ |..+++.+.. +....+.. ++ + +++.+.....
T Consensus 56 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~------r~~~~~~~-~~----~-~lyv~GG~~~ 123 (301)
T 2vpj_A 56 VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR------RGLAGATT-LG----D-MIYVSGGFDG 123 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC------CBSCEEEE-ET----T-EEEEECCBCS
T ss_pred ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC------ccceeEEE-EC----C-EEEEEcccCC
Confidence 3445567776665432 235999999999 9999876532 11122111 11 2 3444432211
Q ss_pred CCCcccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecC-CCceEEEEEECCCceEEEecC-C
Q 041631 166 ERTTELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELED-SKHKIIISFDMANEVFQEVQC-P 243 (358)
Q Consensus 166 ~~~~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i~~-P 243 (358)
......++ +|+..+++|+..+. +|... ....++.++|.+|.+..... .....+..||+.+.+|+.+.- |
T Consensus 124 --~~~~~~~~---~~d~~~~~W~~~~~---~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 194 (301)
T 2vpj_A 124 --SRRHTSME---RYDPNIDQWSMLGD---MQTAR-EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA 194 (301)
T ss_dssp --SCBCCEEE---EEETTTTEEEEEEE---CSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred --CcccceEE---EEcCCCCeEEECCC---CCCCc-ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC
Confidence 12245678 99999999999864 22211 12236778999998764332 123579999999999998843 3
Q ss_pred CCcccccccceeEECCeEEEEEecCCCc-EEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecCC----CCE
Q 041631 244 DIASSAYMETLDLYHDSLSLLFLNTTNN-HYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSR----PRR 316 (358)
Q Consensus 244 ~~~~~~~~~~L~~~~g~L~~~~~~~~~~-~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~----~~~ 316 (358)
.... ...++..+|+|.++....... .-.+|+++- ..|+++..+.......-.+ .-+++|++..+.. ...
T Consensus 195 ~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 195 TKRS---GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp SCCB---SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEE
T ss_pred cccc---cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE-EECCEEEEEcCcCCCccccc
Confidence 3222 125667799998887432221 334566654 8999875443211222222 2367788775411 146
Q ss_pred EEEEeCCCCcEEEeee
Q 041631 317 LLLYDPNTQEMRDLGL 332 (358)
Q Consensus 317 l~~yd~~t~~~~~v~~ 332 (358)
+..||+++++|+.+..
T Consensus 271 v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 271 IECYDPIIDSWEVVTS 286 (301)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCeEEEcCC
Confidence 8999999999999854
No 7
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.97 E-value=8.9e-11 Score=102.81 Aligned_cols=45 Identities=16% Similarity=0.367 Sum_probs=43.2
Q ss_pred CchhHHHHHHhcCCccccc-eeeeccccchhhcCChHhHHHHhhcC
Q 041631 1 MYGDAMVEILSTLSVKNLL-RFKCVCKSWYSLIENPIFISKHLKNV 45 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 45 (358)
||+|++.+||+|||+++|+ ||++|||+|+++++++.|.++++.+.
T Consensus 54 LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 54 LPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp SCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 8999999999999999999 99999999999999999999998874
No 8
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.97 E-value=6.8e-11 Score=76.37 Aligned_cols=39 Identities=28% Similarity=0.610 Sum_probs=36.5
Q ss_pred CchhHHHHHHhcCCccccceeeeccccchhhcCChHhHH
Q 041631 1 MYGDAMVEILSTLSVKNLLRFKCVCKSWYSLIENPIFIS 39 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~ 39 (358)
||+|++.+||++||+++++++++|||+|+.++.++.|.+
T Consensus 12 LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 12 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp SCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 799999999999999999999999999999999998754
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.90 E-value=2.6e-07 Score=82.32 Aligned_cols=214 Identities=10% Similarity=0.019 Sum_probs=127.5
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceecc
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDLV 191 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~~ 191 (358)
...++||.|++|..+++.+.. +....+.. ++ + +++.+.... ......++ +|+..+++|+..+
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~------r~~~~~~~-~~----~-~lyv~GG~~---~~~~~~~~---~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEK------RRDAACVF-WD----N-VVYILGGSQ---LFPIKRMD---CYNVVKDSWYSKL 86 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCC------CBSCEEEE-ET----T-EEEEECCBS---SSBCCEEE---EEETTTTEEEEEE
T ss_pred eEEEecCCCCCEecCCCCCcc------cceeEEEE-EC----C-EEEEEeCCC---CCCcceEE---EEeCCCCeEEECC
Confidence 469999999999999876632 11122111 11 2 244333221 12345677 9999999999886
Q ss_pred cccCeeeeecCCcceEEeCCeEEEEEeec-C-CCceEEEEEECCCceEEEecC-CCCcccccccceeEECCeEEEEEecC
Q 041631 192 CFKTIHYCIPHSHGCTYLDGLCHWLWELE-D-SKHKIIISFDMANEVFQEVQC-PDIASSAYMETLDLYHDSLSLLFLNT 268 (358)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~-~~~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~L~~~~g~L~~~~~~~ 268 (358)
. +|..... ..++.++|.+|.+.... . .....+..||+.+.+|+.++- |.... ....+..+|+|+++....
T Consensus 87 ~---~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 87 G---PPTPRDS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC---SHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp C---CSSCCBS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB---SCEEEEETTEEEEECCEE
T ss_pred C---CCccccc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc---eeEEEEECCEEEEECCCC
Confidence 4 2221112 23678899999876543 1 123579999999999998843 43321 124567799998887421
Q ss_pred C-Cc----EEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEEEeeecCce-
Q 041631 269 T-NN----HYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMRDLGLRSFW- 336 (358)
Q Consensus 269 ~-~~----~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~~v~~~~~~- 336 (358)
. .. .-.+|+++- ..|+++..+.. +....-.+.-+++|++..+. ....+..||+++++|+++......
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELCPMIE-ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCCCcccccceEEEeCCCCCeEEECCCccc-hhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 1 11 345666655 89998764322 22222223337778877541 124689999999999999643322
Q ss_pred --eEEEEeeecceeCCC
Q 041631 337 --FSVYNFKESLIPVKG 351 (358)
Q Consensus 337 --~~~~~y~~slv~~~~ 351 (358)
.....+...++-+.+
T Consensus 239 ~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 239 VTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp SCCEEEEETTEEEEEEC
T ss_pred cceeEEEECCEEEEEeC
Confidence 333344444444433
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.89 E-value=9.3e-07 Score=78.41 Aligned_cols=215 Identities=12% Similarity=0.086 Sum_probs=127.9
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCC---ce
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNS---WR 188 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~---W~ 188 (358)
.++++||.|++|..+|..+.. +....+. ..+ + +++.+.... .......++ +|+..+++ |+
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~------r~~~~~~-~~~----~-~l~v~GG~~--~~~~~~~~~---~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRK------RRYVASV-SLH----D-RIYVIGGYD--GRSRLSSVE---CLDYTADEDGVWY 94 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSC------CBSCEEE-EET----T-EEEEECCBC--SSCBCCCEE---EEETTCCTTCCCE
T ss_pred EEEEEcCCCCeEEeCCCCChh------hccccEE-EEC----C-EEEEEcCCC--CCccCceEE---EEECCCCCCCeeE
Confidence 359999999999999865531 1111111 111 2 344443221 112344677 99999999 99
Q ss_pred ecccccCeeeeecCCcceEEeCCeEEEEEeecCC-CceEEEEEECCCceEEEec-CCCCcccccccceeEECCeEEEEEe
Q 041631 189 DLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS-KHKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLYHDSLSLLFL 266 (358)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~~g~L~~~~~ 266 (358)
..+. +|... ....++.++|.+|.+...... ....+..||+.+.+|+.++ +|.... ....+..+|+|+++..
T Consensus 95 ~~~~---~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 95 SVAP---MNVRR-GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE---GAGLVVASGVIYCLGG 167 (301)
T ss_dssp EECC---CSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB---SCEEEEETTEEEEECC
T ss_pred ECCC---CCCCc-cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc---cceEEEECCEEEEECC
Confidence 9864 22211 122377789999987643321 2457999999999999874 343221 1245667999988874
Q ss_pred cCC-CcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEEEeeecCce---
Q 041631 267 NTT-NNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMRDLGLRSFW--- 336 (358)
Q Consensus 267 ~~~-~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~~v~~~~~~--- 336 (358)
... ...-.+|+++- ..|++...++. +....-.+.-++.|++..+. ....+..||+++++|+++......
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCc-ccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 322 12335666665 89998754322 22222233347788887642 135699999999999999643322
Q ss_pred eEEEEeeecceeCCC
Q 041631 337 FSVYNFKESLIPVKG 351 (358)
Q Consensus 337 ~~~~~y~~slv~~~~ 351 (358)
.....+...++-+.+
T Consensus 247 ~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 247 VGATVLRGRLYAIAG 261 (301)
T ss_dssp CEEEEETTEEEEECC
T ss_pred eeEEEECCEEEEEcC
Confidence 334444444444443
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.85 E-value=1.1e-06 Score=78.06 Aligned_cols=215 Identities=9% Similarity=0.093 Sum_probs=127.6
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceecc
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDLV 191 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~~ 191 (358)
...+.||.+++|..+++.+... ....+. .++ + +++.+..... ......++ +|+..+++|+..+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r------~~~~~~-~~~----~-~lyv~GG~~~--~~~~~~~~---~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRR------CRAGMV-YMA----G-LVFAVGGFNG--SLRVRTVD---SYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCC------BSCEEE-EET----T-EEEEESCBCS--SSBCCCEE---EEETTTTEEEEEC
T ss_pred cEEEEcCcCCcEeEcccCCccc------ccceEE-EEC----C-EEEEEeCcCC--CccccceE---EECCCCCceeeCC
Confidence 3589999999999998665321 111111 111 2 3333322111 12234677 9999999999987
Q ss_pred cccCeeeeecCCcceEEeCCeEEEEEeecCC-CceEEEEEECCCceEEEecC-CCCcccccccceeEECCeEEEEEecCC
Q 041631 192 CFKTIHYCIPHSHGCTYLDGLCHWLWELEDS-KHKIIISFDMANEVFQEVQC-PDIASSAYMETLDLYHDSLSLLFLNTT 269 (358)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~L~~~~g~L~~~~~~~~ 269 (358)
. +|..... ..++.++|.+|.+...... ....+..||+.+.+|+.++- |... .....+.++|+|.++.....
T Consensus 94 ~---~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 94 N---MRDRRST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp C---CSSCCBS-CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEET
T ss_pred C---CCccccc-eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEEECCEEEEEeCCCC
Confidence 4 2221112 2377889999988754332 23578999999999998843 3322 11245667999988874321
Q ss_pred Cc---EEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEEEeeecCce---e
Q 041631 270 NN---HYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMRDLGLRSFW---F 337 (358)
Q Consensus 270 ~~---~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~~v~~~~~~---~ 337 (358)
.. .-.+|+++- ..|++...++. +-...-.+.-++.|++..+. ....+..||+++++|+.+...... .
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMST-RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCccccEEEEEeCCCCcEEECCCCcc-ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC
Confidence 11 234666655 89998754322 22222222346788887541 124699999999999998743322 3
Q ss_pred EEEEeeecceeCCC
Q 041631 338 SVYNFKESLIPVKG 351 (358)
Q Consensus 338 ~~~~y~~slv~~~~ 351 (358)
....+...++-+.+
T Consensus 246 ~~~~~~~~i~v~GG 259 (302)
T 2xn4_A 246 GVCAVNGLLYVVGG 259 (302)
T ss_dssp EEEEETTEEEEECC
T ss_pred eEEEECCEEEEECC
Confidence 34444444444443
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.85 E-value=6.1e-07 Score=80.02 Aligned_cols=217 Identities=9% Similarity=0.011 Sum_probs=126.0
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEec--CCCcccceeeEEEEEecCCCCcee
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWD--ERTTELHEFSLCTIYNLRTNSWRD 189 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~--~~~~~~~~~e~~~vyss~~~~W~~ 189 (358)
.+.++||.|++|..++..+... ....+. ..+ + +++.+..... ........++ +|+..+++|+.
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r------~~~~~~-~~~----~-~lyv~GG~~~~~~~~~~~~~~~---~~d~~~~~W~~ 104 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPR------SGLAGC-VVG----G-LLYAVGGRNNSPDGNTDSSALD---CYNPMTNQWSP 104 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC------BSCEEE-EET----T-EEEEECCEEEETTEEEECCCEE---EEETTTTEEEE
T ss_pred eEEEEcCCCCeEeECCCCCccc------ccceEE-EEC----C-EEEEECCCcCCCCCCeecceEE---EECCCCCeEeE
Confidence 3599999999999998665321 111111 111 2 2333322110 1111234577 99999999999
Q ss_pred cccccCeeeeecCCcceEEeCCeEEEEEeecCC-CceEEEEEECCCceEEEec-CCCCcccccccceeEECCeEEEEEec
Q 041631 190 LVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS-KHKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLYHDSLSLLFLN 267 (358)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~~g~L~~~~~~ 267 (358)
.+. ++... ....++.++|.+|.+...... ....+..||+.+.+|+.++ +|.... ....+..+|+|.++...
T Consensus 105 ~~~---~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 105 CAP---MSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI---GVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp CCC---CSSCC-BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB---SCEEEEETTEEEEECCB
T ss_pred CCC---CCcCc-cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc---ceEEEEECCEEEEEeCC
Confidence 874 22211 122367789999987643221 1346899999999999884 343322 12456679999988743
Q ss_pred CCC-cEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEEEeeecCce---e
Q 041631 268 TTN-NHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMRDLGLRSFW---F 337 (358)
Q Consensus 268 ~~~-~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~~v~~~~~~---~ 337 (358)
... ..-.+|+++- ..|++.-.++. +-...-.+.-++.|++..+. ....+..||+++++|+++...... .
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNT-IRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCC-ccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 221 1334666654 89998754322 21112222237778887641 135699999999999998643322 3
Q ss_pred EEEEeeecceeCCC
Q 041631 338 SVYNFKESLIPVKG 351 (358)
Q Consensus 338 ~~~~y~~slv~~~~ 351 (358)
....+...++-+.+
T Consensus 257 ~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 257 GITVHQGRIYVLGG 270 (308)
T ss_dssp EEEEETTEEEEECC
T ss_pred EEEEECCEEEEEcC
Confidence 34444444444443
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.79 E-value=4e-07 Score=82.91 Aligned_cols=219 Identities=14% Similarity=0.101 Sum_probs=124.2
Q ss_pred EeeeecceEEEeecC--CeeEEEecC--ccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEE-e--cCCC
Q 041631 96 LGGPYDGIYCIFGLR--DRITLWNVA--TRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTY-W--DERT 168 (358)
Q Consensus 96 ~~~s~~GLl~l~~~~--~~~~V~NP~--T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~--~~~~ 168 (358)
..+..+|.|.+..+. +.+++.||. +++|..+|+.+.. + +....+. .++ + +|..+... . ....
T Consensus 14 ~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~-~----R~~~~~~-~~~----~-~lyv~GG~~~~~~~~~ 82 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG-P----RDQATSA-FID----G-NLYVFGGIGKNSEGLT 82 (357)
T ss_dssp EEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC-C----CBSCEEE-EET----T-EEEEECCEEECTTSCE
T ss_pred EEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC-c----CccceEE-EEC----C-EEEEEcCCCCCCCccc
Confidence 334447777665532 346999998 4999999876511 1 1111111 112 1 34444322 1 0011
Q ss_pred cccceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCC--------------------------
Q 041631 169 TELHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS-------------------------- 222 (358)
Q Consensus 169 ~~~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-------------------------- 222 (358)
.....++ +|+..+++|+.....+ |... ....++.++|.+|.+......
T Consensus 83 ~~~~~v~---~yd~~~~~W~~~~~~~--p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 83 QVFNDVH---KYNPKTNSWVKLMSHA--PMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp EECCCEE---EEETTTTEEEECSCCC--SSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeeccEE---EEeCCCCcEEECCCCC--Cccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 2245678 9999999999987522 2211 122256799999987743210
Q ss_pred ---------CceEEEEEECCCceEEEe-cCCCCcccccccceeEECCeEEEEEecC--CCcEEEEEEEC---C-CeeeEE
Q 041631 223 ---------KHKIIISFDMANEVFQEV-QCPDIASSAYMETLDLYHDSLSLLFLNT--TNNHYEIWVLK---E-RIWSKH 286 (358)
Q Consensus 223 ---------~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~L~~~~g~L~~~~~~~--~~~~l~IW~l~---~-~~W~~~ 286 (358)
....+..||+.+.+|+.+ ++|..... ...++..+|+|.++.... ....-++|.++ + ..|+++
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~--~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA--GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB--SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCCCCcc--cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 125899999999999987 34433222 125667799998886321 11234566664 2 899987
Q ss_pred EEEccC-CccceEEEeeCCcEEEEecC-CC--------------------CEEEEEeCCCCcEEEeeec
Q 041631 287 LSVTLL-GVEEPLGVWNNGGFFVQSDS-RP--------------------RRLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 287 ~~i~~~-~~~~p~~~~~~g~i~~~~~~-~~--------------------~~l~~yd~~t~~~~~v~~~ 333 (358)
..+... ......++.-+++|++..+. .. ..+..||+++++|+++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 235 APVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp CCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC
T ss_pred CCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC
Confidence 554221 12222233347778887541 00 2578999999999999654
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.73 E-value=3.6e-06 Score=75.21 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=97.0
Q ss_pred eeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeec----CCCceEEEEEECCCceEEEec-CCCCcc
Q 041631 173 EFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELE----DSKHKIIISFDMANEVFQEVQ-CPDIAS 247 (358)
Q Consensus 173 ~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~~~~il~fD~~~e~~~~i~-~P~~~~ 247 (358)
.++ +|+..+++|+..+. +|..... ..++.++|.+|.+.... ......+..||+.+.+|+.++ +|....
T Consensus 68 ~~~---~~d~~~~~W~~~~~---~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 140 (315)
T 4asc_A 68 YFL---QFDHLDSEWLGMPP---LPSPRCL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY 140 (315)
T ss_dssp EEE---EEETTTTEEEECCC---BSSCEES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred ceE---EecCCCCeEEECCC---CCcchhc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc
Confidence 367 99999999998864 2321122 23778899999887532 223457999999999999874 343321
Q ss_pred cccccceeEECCeEEEEEec--CCCcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecCC----CCEEEE
Q 041631 248 SAYMETLDLYHDSLSLLFLN--TTNNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSR----PRRLLL 319 (358)
Q Consensus 248 ~~~~~~L~~~~g~L~~~~~~--~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~----~~~l~~ 319 (358)
....+..+|+|.++... .....-.+|+++- ..|+++-.++. +-...-++.-+++|++..+.. ...+..
T Consensus 141 ---~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 216 (315)
T 4asc_A 141 ---GHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT-ARSLFGATVHDGRIIVAAGVTDTGLTSSAEV 216 (315)
T ss_dssp ---SCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEEEEECSSSEEEEEEE
T ss_pred ---ceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC-chhceEEEEECCEEEEEeccCCCCccceEEE
Confidence 22566789999888753 1222346777765 89998654322 222222333477788875411 236899
Q ss_pred EeCCCCcEEEeee
Q 041631 320 YDPNTQEMRDLGL 332 (358)
Q Consensus 320 yd~~t~~~~~v~~ 332 (358)
||+++++|+++..
T Consensus 217 yd~~~~~W~~~~~ 229 (315)
T 4asc_A 217 YSITDNKWAPFEA 229 (315)
T ss_dssp EETTTTEEEEECC
T ss_pred EECCCCeEEECCC
Confidence 9999999999964
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.61 E-value=8.8e-06 Score=72.74 Aligned_cols=167 Identities=11% Similarity=0.087 Sum_probs=103.9
Q ss_pred eeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeec---CCCceEEEEEECCCceEEEec-CCCCcccc
Q 041631 174 FSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELE---DSKHKIIISFDMANEVFQEVQ-CPDIASSA 249 (358)
Q Consensus 174 ~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~~il~fD~~~e~~~~i~-~P~~~~~~ 249 (358)
++ +|+..+++|+..+. +|... ....++.++|.+|.+.... ......+..||+.+.+|+.+. +|.....
T Consensus 80 ~~---~~d~~~~~W~~~~~---~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~- 151 (318)
T 2woz_A 80 FF---QLDNVSSEWVGLPP---LPSAR-CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG- 151 (318)
T ss_dssp EE---EEETTTTEEEECSC---BSSCB-CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-
T ss_pred EE---EEeCCCCcEEECCC---CCccc-cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-
Confidence 67 99999999998864 23211 1223778899999887653 122457999999999999884 3443221
Q ss_pred cccceeEECCeEEEEEecC--CCcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecC----CCCEEEEEe
Q 041631 250 YMETLDLYHDSLSLLFLNT--TNNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS----RPRRLLLYD 321 (358)
Q Consensus 250 ~~~~L~~~~g~L~~~~~~~--~~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~----~~~~l~~yd 321 (358)
...+..+|+|.++.... ....-.+|+++- ..|++.-.+.. +-...-.+.-+++|++..+. ....+..||
T Consensus 152 --~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 228 (318)
T 2woz_A 152 --HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT-PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFD 228 (318)
T ss_dssp --CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEE
T ss_pred --cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC-CcccceEEEECCEEEEEcCcCCCCccceEEEEE
Confidence 24566799998877421 112335677765 89998754322 21112222246778887541 024588999
Q ss_pred CCCCcEEEeeecCce---eEEEEeeecceeCCC
Q 041631 322 PNTQEMRDLGLRSFW---FSVYNFKESLIPVKG 351 (358)
Q Consensus 322 ~~t~~~~~v~~~~~~---~~~~~y~~slv~~~~ 351 (358)
+++++|+++...... .....+...++-+.+
T Consensus 229 ~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 261 (318)
T 2woz_A 229 LKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261 (318)
T ss_dssp TTTCCEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCCeEEECCCCCCcccceEEEEECCEEEEECC
Confidence 999999998643322 334444445554443
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.58 E-value=4.7e-05 Score=71.10 Aligned_cols=44 Identities=25% Similarity=0.425 Sum_probs=40.9
Q ss_pred CchhHHHHHHhcCCccccceeeeccccchhhcCChHhHHHHhhc
Q 041631 1 MYGDAMVEILSTLSVKNLLRFKCVCKSWYSLIENPIFISKHLKN 44 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~ 44 (358)
||+|++.+||++|++++|+|+++|||+|+.++.++.+.+.....
T Consensus 22 lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 22 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp SCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 79999999999999999999999999999999999988876654
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.58 E-value=0.00018 Score=67.33 Aligned_cols=40 Identities=15% Similarity=0.321 Sum_probs=36.4
Q ss_pred CchhHHHHHHhcCCccccceeeeccccchhhcCC-hHhHHH
Q 041631 1 MYGDAMVEILSTLSVKNLLRFKCVCKSWYSLIEN-PIFISK 40 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~-~~F~~~ 40 (358)
||+|++.+||++||+++|+|+++|||+|+.++.+ +...+.
T Consensus 18 lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 18 LPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp SCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 8999999999999999999999999999999998 655444
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.48 E-value=2e-05 Score=71.51 Aligned_cols=152 Identities=9% Similarity=0.027 Sum_probs=88.0
Q ss_pred ceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCC--CceEEEEEEC--CCceEEEecC-CCCc
Q 041631 172 HEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS--KHKIIISFDM--ANEVFQEVQC-PDIA 246 (358)
Q Consensus 172 ~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~~il~fD~--~~e~~~~i~~-P~~~ 246 (358)
..++ +|+..+++|+.... +|........++.++|.+|.+...... ....+..||+ .+.+|+.+.. |...
T Consensus 168 ~~v~---~yd~~~~~W~~~~~---~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~ 241 (357)
T 2uvk_A 168 KFLL---SFDPSTQQWSYAGE---SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD 241 (357)
T ss_dssp CEEE---EEETTTTEEEEEEE---CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT
T ss_pred ccEE---EEeCCCCcEEECCC---CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc
Confidence 4678 99999999999864 221111112378889999987643211 1235777876 8899998743 3221
Q ss_pred ccccccceeEECCeEEEEEecCC------------------CcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcE
Q 041631 247 SSAYMETLDLYHDSLSLLFLNTT------------------NNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGF 306 (358)
Q Consensus 247 ~~~~~~~L~~~~g~L~~~~~~~~------------------~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i 306 (358)
. .....++..+|+|.++..... ...-.+|+++- ..|+++-.++. +-....++.-+++|
T Consensus 242 ~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i 319 (357)
T 2uvk_A 242 G-VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ-GRAYGVSLPWNNSL 319 (357)
T ss_dssp C-CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS-CCBSSEEEEETTEE
T ss_pred c-cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC-CcccceeEEeCCEE
Confidence 1 111246777999988874211 11235566554 89999865532 22222233347778
Q ss_pred EEEecC--C---CCEEEEEeCCCCcEEEee
Q 041631 307 FVQSDS--R---PRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 307 ~~~~~~--~---~~~l~~yd~~t~~~~~v~ 331 (358)
++..+. . -..+..++++++++.+..
T Consensus 320 ~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 320 LIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 887651 1 135888999999988764
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.43 E-value=2.5e-05 Score=77.66 Aligned_cols=214 Identities=12% Similarity=0.158 Sum_probs=122.7
Q ss_pred ecceEEEeecC-----CeeEEEecCccceecCC-CCCCC-CCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccc
Q 041631 100 YDGIYCIFGLR-----DRITLWNVATRDSRTLP-NYGPT-CPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELH 172 (358)
Q Consensus 100 ~~GLl~l~~~~-----~~~~V~NP~T~~~~~LP-~~~~~-~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 172 (358)
.+|.|.+..+. +..+++||.|++|..++ +.+.. .+. ......++.+.. ++ +++.+...... .....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~----~~-~lyv~GG~~~~-~~~~~ 468 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISR----NN-QLLLIGGRKAP-HQGLS 468 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETT----TT-EEEEECCBSST-TCBCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEcc----CC-EEEEEcCCCCC-CCccc
Confidence 46666655542 23599999999999998 42200 010 001111222100 12 34444322111 11245
Q ss_pred eeeEEEEEecCCCCceecccccCeeeeecCCcceEEe-CCeEEEEEeecCCCceEEEEEECCCceEEEecC----CCCcc
Q 041631 173 EFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL-DGLCHWLWELEDSKHKIIISFDMANEVFQEVQC----PDIAS 247 (358)
Q Consensus 173 ~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~----P~~~~ 247 (358)
.++ +|+..+++|+..+. +|...... .++.+ +|.+|.+....... .+..||+.+.+|+.+.. |....
T Consensus 469 dv~---~yd~~t~~W~~~~~---~p~~R~~h-~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 469 DNW---IFDMKTREWSMIKS---LSHTRFRH-SACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp CCE---EEETTTTEEEECCC---CSBCCBSC-EEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred cEE---EEeCCCCcEEECCC---CCCCcccc-eEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCccc
Confidence 678 99999999999864 33211222 25554 99999876543222 69999999999998864 32221
Q ss_pred cccccceeEEC---CeEEEEEecCC-----CcEEEEEEECCCe------eeEEEEEccCC-ccceEEEeeCCcEEEEecC
Q 041631 248 SAYMETLDLYH---DSLSLLFLNTT-----NNHYEIWVLKERI------WSKHLSVTLLG-VEEPLGVWNNGGFFVQSDS 312 (358)
Q Consensus 248 ~~~~~~L~~~~---g~L~~~~~~~~-----~~~l~IW~l~~~~------W~~~~~i~~~~-~~~p~~~~~~g~i~~~~~~ 312 (358)
....+.++ |+|+++..... ...+.++-++... |.++....+.+ ...-..+.+++.|++..+.
T Consensus 540 ---~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 540 ---VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp ---BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred ---ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 11334444 88888874311 2345555555566 88877643332 2333444444888887651
Q ss_pred -------CCCEEEEEeCCCCcEEEeee
Q 041631 313 -------RPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 313 -------~~~~l~~yd~~t~~~~~v~~ 332 (358)
....+..||+++++|+.+..
T Consensus 617 ~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 617 SPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp CSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred cCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 13569999999999997654
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.40 E-value=2e-05 Score=73.41 Aligned_cols=43 Identities=28% Similarity=0.496 Sum_probs=38.7
Q ss_pred Cchh----HHHHHHhcCCccccceeeeccccchhhcCChHhHHHHhh
Q 041631 1 MYGD----AMVEILSTLSVKNLLRFKCVCKSWYSLIENPIFISKHLK 43 (358)
Q Consensus 1 LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~ 43 (358)
||+| ++..||++|++++|+|+++|||+|+.++.++.+.+....
T Consensus 14 lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 14 LPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp TGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred CCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 7999 999999999999999999999999999998887665544
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.92 E-value=2.1e-06 Score=74.36 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=42.5
Q ss_pred CchhHHHHHHhcCCccccceeeeccccchhhcCChHhHHHHhhcC
Q 041631 1 MYGDAMVEILSTLSVKNLLRFKCVCKSWYSLIENPIFISKHLKNV 45 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~ 45 (358)
||+|++..||+.|++++|+|+.+|||+||.+.+++...+.++.+.
T Consensus 8 LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 8 LPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp SCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred CCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 799999999999999999999999999999999999988887773
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.67 E-value=0.00036 Score=68.82 Aligned_cols=217 Identities=10% Similarity=0.042 Sum_probs=119.3
Q ss_pred eecceEEEeecCC--eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 99 PYDGIYCIFGLRD--RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 99 s~~GLl~l~~~~~--~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
..+|.|.+..+.. ...++||.|++|..+++.+.. +......+ + + .+ |++.+.... ........+|
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~------R~~~s~~~-~-~-dg--~iyv~GG~~-~~~~~~~~~e- 317 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA------RGYQSSAT-M-S-DG--RVFTIGGSW-SGGVFEKNGE- 317 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC------CSSCEEEE-C-T-TS--CEEEECCCC-CSSSCCCCEE-
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc------ccccceEE-e-c-CC--eEEEEeCcc-cCCcccccce-
Confidence 4578777776532 469999999999999866521 11122111 1 1 11 344443211 1112345688
Q ss_pred EEEEecCCCCceecccc--cCeeeeecCCcceEEeCCeEEEEEeecC-----CCceEEEEEECCCceEEEecCCCCc---
Q 041631 177 CTIYNLRTNSWRDLVCF--KTIHYCIPHSHGCTYLDGLCHWLWELED-----SKHKIIISFDMANEVFQEVQCPDIA--- 246 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~--~~~~~~~~~~~~~v~~~G~lywl~~~~~-----~~~~~il~fD~~~e~~~~i~~P~~~--- 246 (358)
+|+..+++|...+.. .+++.. .....+..+|.+|.+....+ .....+..||+.+++|.....+...
T Consensus 318 --~yd~~t~~W~~~~~~~~~p~~~~--~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 318 --VYSPSSKTWTSLPNAKVNPMLTA--DKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp --EEETTTTEEEEETTSCSGGGCCC--CTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred --EeCCCCCcceeCCCccccccccc--cccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 999999999987531 122221 11124456777776653321 1235789999999998643111111
Q ss_pred ---cccccccee--EECCeEEEEEecCC-------CcEEEEEEECC--CeeeEEE--EEccCCccceEEEeeCCcEEEEe
Q 041631 247 ---SSAYMETLD--LYHDSLSLLFLNTT-------NNHYEIWVLKE--RIWSKHL--SVTLLGVEEPLGVWNNGGFFVQS 310 (358)
Q Consensus 247 ---~~~~~~~L~--~~~g~L~~~~~~~~-------~~~l~IW~l~~--~~W~~~~--~i~~~~~~~p~~~~~~g~i~~~~ 310 (358)
.......++ ..+|++.++..... .....|++.+. ..|.+.. .+.......-..+..+|+|++..
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~G 473 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITG 473 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEEC
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEEC
Confidence 000110111 23788888764211 11224555554 7898765 33211222333444578888876
Q ss_pred cCC----------CCEEEEEeCCCCcEEEeee
Q 041631 311 DSR----------PRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 311 ~~~----------~~~l~~yd~~t~~~~~v~~ 332 (358)
+.. ...+..||+++++|+.+..
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~ 505 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP 505 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC
T ss_pred CcccCcCcCCCCcccceEEEcCCCCceeecCC
Confidence 511 1458999999999999764
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.61 E-value=0.0015 Score=64.85 Aligned_cols=173 Identities=8% Similarity=0.011 Sum_probs=106.5
Q ss_pred cceeeEEEEEecCCCCceecc-cc--cCeeeeecCCcceEEe--CCeEEEEEeecCC--CceEEEEEECCCceEEEec-C
Q 041631 171 LHEFSLCTIYNLRTNSWRDLV-CF--KTIHYCIPHSHGCTYL--DGLCHWLWELEDS--KHKIIISFDMANEVFQEVQ-C 242 (358)
Q Consensus 171 ~~~~e~~~vyss~~~~W~~~~-~~--~~~~~~~~~~~~~v~~--~G~lywl~~~~~~--~~~~il~fD~~~e~~~~i~-~ 242 (358)
...++ +|+..+++|.... .. ..+|..... ..++.+ +|.+|.+...... ....+..||+.+.+|+.+. +
T Consensus 411 ~~~v~---~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 411 VNEIL---QLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp CCCEE---EEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC
T ss_pred cCcEE---EEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC
Confidence 44577 9999999999886 21 123331122 226777 9999987654321 2356899999999999884 3
Q ss_pred CCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC--C-ccce-EEEeeC-CcEEEEecC--
Q 041631 243 PDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL--G-VEEP-LGVWNN-GGFFVQSDS-- 312 (358)
Q Consensus 243 P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~--~-~~~p-~~~~~~-g~i~~~~~~-- 312 (358)
|.... ....+.+ +|+|+++....... .+|+++- ..|+........ + ...- +.+..+ +.|++..+.
T Consensus 487 p~~R~---~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 487 SHTRF---RHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp SBCCB---SCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT
T ss_pred CCCcc---cceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC
Confidence 43221 1245554 89999887543333 7777766 899987653211 2 2222 222323 678887652
Q ss_pred ----CCCEEEEEeCCCCc------EEEeeec-Cce---eEEEEee-ecceeCCCC
Q 041631 313 ----RPRRLLLYDPNTQE------MRDLGLR-SFW---FSVYNFK-ESLIPVKGV 352 (358)
Q Consensus 313 ----~~~~l~~yd~~t~~------~~~v~~~-~~~---~~~~~y~-~slv~~~~~ 352 (358)
....+..||+++++ |+++... ..+ .....+. ..++-+++.
T Consensus 562 ~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 562 DQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp TSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred CCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 12469999999999 8888652 122 4455666 555555543
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.53 E-value=0.00067 Score=66.89 Aligned_cols=191 Identities=8% Similarity=0.024 Sum_probs=105.4
Q ss_pred EEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCC----CcccceeeEEEEEecCCCCcee
Q 041631 114 TLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDER----TTELHEFSLCTIYNLRTNSWRD 189 (358)
Q Consensus 114 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~----~~~~~~~e~~~vyss~~~~W~~ 189 (358)
...+|.+++|..+++.|.. ....++ .+.. =|++.+....... ......++ +|+..+++|+.
T Consensus 169 ~~~dp~~~~W~~~~~~P~~--------~~~~av--~~~~--g~l~v~GG~~~~~~~~~~~~~~~~~---~yd~~t~~w~~ 233 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPIV--------PAAAAI--EPTS--GRVLMWSSYRNDAFGGSPGGITLTS---SWDPSTGIVSD 233 (656)
T ss_dssp CCCCTTSCEEEEEEECSSC--------CSEEEE--ETTT--TEEEEEEECCCTTTCSCCCSEEEEE---EECTTTCCBCC
T ss_pred ccCCCCCCeeeeeccCCCC--------ceeEEE--EecC--CEEEEEecccccccccCCCCeEEEE---EEeCCCCcEEe
Confidence 3458889999987766521 112222 2211 1444443322110 01123567 99999999998
Q ss_pred cccccCeeee--ecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEEec-CCCCcccccccceeEE-CCeEEEEE
Q 041631 190 LVCFKTIHYC--IPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLY-HDSLSLLF 265 (358)
Q Consensus 190 ~~~~~~~~~~--~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~-~g~L~~~~ 265 (358)
... ++.. .+....++..+|.+|.+..... ..+..||+.+.+|..+. +|... .....+.+ +|+++++.
T Consensus 234 ~~~---~~~~~~~~~~~~~~~~~g~lyv~GG~~~---~~v~~yd~~t~~W~~~~~~~~~R---~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 234 RTV---TVTKHDMFCPGISMDGNGQIVVTGGNDA---KKTSLYDSSSDSWIPGPDMQVAR---GYQSSATMSDGRVFTIG 304 (656)
T ss_dssp CEE---EECSCCCSSCEEEECTTSCEEEECSSST---TCEEEEEGGGTEEEECCCCSSCC---SSCEEEECTTSCEEEEC
T ss_pred Ccc---cCCCCCCccccccCCCCCCEEEeCCCCC---CceEEecCcCCceeECCCCCccc---cccceEEecCCeEEEEe
Confidence 764 2211 1111113456899997764332 26999999999999874 23221 12246677 99998887
Q ss_pred ec-CC---CcEEEEEEECCCeeeEEEEE--ccCCc----------cceEEE-eeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 266 LN-TT---NNHYEIWVLKERIWSKHLSV--TLLGV----------EEPLGV-WNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 266 ~~-~~---~~~l~IW~l~~~~W~~~~~i--~~~~~----------~~p~~~-~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
.. .. ...+++|-.+...|+..-.. .+... ...+.+ +.+|.++.... ...+..||++++++.
T Consensus 305 G~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~--~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGP--STAMNWYYTSGSGDV 382 (656)
T ss_dssp CCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCS--SSEEEEEECSTTCEE
T ss_pred CcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecC--ccceeeeecCCccee
Confidence 52 11 24556665555889886321 11110 011111 12344443333 467999999999876
Q ss_pred Ee
Q 041631 329 DL 330 (358)
Q Consensus 329 ~v 330 (358)
..
T Consensus 383 ~~ 384 (656)
T 1k3i_A 383 KS 384 (656)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.07 E-value=8.2e-05 Score=66.78 Aligned_cols=37 Identities=30% Similarity=0.657 Sum_probs=34.5
Q ss_pred CchhHHHHHHhcCCccccceeeeccccchhhcCChHh
Q 041631 1 MYGDAMVEILSTLSVKNLLRFKCVCKSWYSLIENPIF 37 (358)
Q Consensus 1 LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F 37 (358)
||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 12 LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 12 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp SCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 7999999999999999999999999999999877654
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.36 E-value=0.00052 Score=66.57 Aligned_cols=31 Identities=26% Similarity=0.549 Sum_probs=29.4
Q ss_pred CchhHHHHHHhcCC-ccccceeeeccccchhh
Q 041631 1 MYGDAMVEILSTLS-VKNLLRFKCVCKSWYSL 31 (358)
Q Consensus 1 LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 31 (358)
||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 9 LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 9 FPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 79999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.00 E-value=0.0011 Score=64.33 Aligned_cols=31 Identities=16% Similarity=0.510 Sum_probs=29.8
Q ss_pred CchhHHHHHHhcC-Cccccceeeeccccchhh
Q 041631 1 MYGDAMVEILSTL-SVKNLLRFKCVCKSWYSL 31 (358)
Q Consensus 1 LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~l 31 (358)
||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 16 LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 16 TVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 7999999999999 899999999999999987
No 28
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.12 E-value=4.4 Score=35.28 Aligned_cols=78 Identities=10% Similarity=0.108 Sum_probs=48.2
Q ss_pred eeEE-CCeEEEEEecCCCcEEEEEEECC-CeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEE--eCCCCcEE
Q 041631 254 LDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLY--DPNTQEMR 328 (358)
Q Consensus 254 L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~y--d~~t~~~~ 328 (358)
+... +|+..++... ....+.||.++. +.+.....+... ....-+++..+|+.++......+.+..| |.++++++
T Consensus 245 i~~spdG~~l~v~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNR-GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEECTTSCEEEEEEE-TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 4444 6764433332 257899999986 566666665432 2234566667887554433224667777 88899999
Q ss_pred Eeee
Q 041631 329 DLGL 332 (358)
Q Consensus 329 ~v~~ 332 (358)
.+..
T Consensus 324 ~~~~ 327 (347)
T 3hfq_A 324 LLQK 327 (347)
T ss_dssp EEEE
T ss_pred eccc
Confidence 8864
No 29
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.09 E-value=5.8 Score=34.78 Aligned_cols=118 Identities=15% Similarity=0.121 Sum_probs=66.3
Q ss_pred EeCCe-EEEEEeecCCCceEEEEEECCCceEEEec-C---CCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC-
Q 041631 208 YLDGL-CHWLWELEDSKHKIIISFDMANEVFQEVQ-C---PDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE- 280 (358)
Q Consensus 208 ~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~-~---P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~- 280 (358)
.-+|. +|...... ..|..||+.+.++..+. + |..... ...+... +|+..++........+.||.++.
T Consensus 219 spdg~~l~v~~~~~----~~v~v~~~~~g~~~~~~~~~~~~~~~~~--~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 219 NSDGKFAYLINEIG----GTVIAFRYADGMLDEIQTVAADTVNAQG--SGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp CTTSSEEEEEETTT----CEEEEEEEETTEEEEEEEEESCSSCCCC--EEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred cCCCCEEEEEcCCC----CeEEEEEecCCceEEeEEEecCCCCCCC--cccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 34675 55433222 36888888877665432 1 221111 1134433 77755554442157899999973
Q ss_pred -CeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEE--EeCCCCcEEEee
Q 041631 281 -RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLL--YDPNTQEMRDLG 331 (358)
Q Consensus 281 -~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~--yd~~t~~~~~v~ 331 (358)
+.+.....+.......-+.+..+|+.++......+.+.. +|.++++++.+.
T Consensus 293 ~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 293 NGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 677666666542122345666778755543311455555 788899988875
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.56 E-value=5.5 Score=33.47 Aligned_cols=187 Identities=7% Similarity=-0.030 Sum_probs=91.8
Q ss_pred eecceEEEeec-CCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGL-RDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
..+|.+.+... ...++++|| +++......+.. .....++.+|+... +. +... . ...+.
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~--------~~~~~~i~~~~~g~---l~-v~~~-~-----~~~i~-- 165 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK--------GSYPSFITLGSDNA---LW-FTEN-Q-----NNAIG-- 165 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST--------TCCEEEEEECTTSC---EE-EEET-T-----TTEEE--
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC--------CCCCceEEEcCCCC---EE-EEeC-C-----CCEEE--
Confidence 34676666553 335688999 766654432210 01234566665432 21 1111 0 22344
Q ss_pred EEEecCCCCceecccccCeeeeecCCcceEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCccccccccee
Q 041631 178 TIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLD 255 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~ 255 (358)
+|+. ++........... ..+.++.+ +|.+|+..... ..|..||. +.++..+..|..... ...+.
T Consensus 166 -~~~~-~g~~~~~~~~~~~-----~~~~~i~~~~~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~~~~~~~--~~~i~ 231 (299)
T 2z2n_A 166 -RITE-SGDITEFKIPTPA-----SGPVGITKGNDDALWFVEIIG----NKIGRITT-SGEITEFKIPTPNAR--PHAIT 231 (299)
T ss_dssp -EECT-TCCEEEEECSSTT-----CCEEEEEECTTSSEEEEETTT----TEEEEECT-TCCEEEEECSSTTCC--EEEEE
T ss_pred -EEcC-CCcEEEeeCCCCC-----CcceeEEECCCCCEEEEccCC----ceEEEECC-CCcEEEEECCCCCCC--ceeEE
Confidence 6666 5555443210000 11123433 57876544322 37999999 777776656532211 11344
Q ss_pred EE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCcc--ceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 256 LY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVE--EPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 256 ~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~--~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
.. +|+|.+.... ...+.+|-.+ +.. ..+.+. .... .-+.+ ++|.+++... .+.+..||+++++++
T Consensus 232 ~~~~g~l~v~~~~--~~~i~~~d~~-g~~-~~~~~~-~~~~~~~~i~~-~~g~l~v~~~--~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 232 AGAGIDLWFTEWG--ANKIGRLTSN-NII-EEYPIQ-IKSAEPHGICF-DGETIWFAME--CDKIGKLTLIKDNME 299 (299)
T ss_dssp ECSTTCEEEEETT--TTEEEEEETT-TEE-EEEECS-SSSCCEEEEEE-CSSCEEEEET--TTEEEEEEEC-----
T ss_pred ECCCCCEEEeccC--CceEEEECCC-Cce-EEEeCC-CCCCccceEEe-cCCCEEEEec--CCcEEEEEcCcccCC
Confidence 43 6776655422 4566666543 221 111121 1122 23445 7889999876 689999999988754
No 31
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.96 E-value=9 Score=33.22 Aligned_cols=105 Identities=9% Similarity=-0.019 Sum_probs=60.5
Q ss_pred ceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEe
Q 041631 224 HKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVW 301 (358)
Q Consensus 224 ~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~ 301 (358)
.-.+..+|..+.++..+........ ...++.. +|+|+++........+.+|.++.+.+.....+... .-..-+++.
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~--p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQN--PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSC--CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCC--cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 3467888888888876543221111 1134444 78855555433357899999977777666554321 112235666
Q ss_pred eCCcEEEEecCCCCEEEEEeCC-CCcEEEe
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPN-TQEMRDL 330 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~-t~~~~~v 330 (358)
.+|+.++.....++.+..||++ +++.+.+
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 7777554433225789999984 4455444
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.96 E-value=7.9 Score=32.52 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=69.2
Q ss_pred EEeCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeE
Q 041631 207 TYLDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSK 285 (358)
Q Consensus 207 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~ 285 (358)
.+.+|.+|--+... ....|..+|+.+.+- ..+++|..... ..+...+++|.++... .. .+|+.+-..-.+
T Consensus 27 ~~~~~~LyestG~~--g~S~v~~vD~~tgkv~~~~~l~~~~fg---eGi~~~~~~ly~ltw~--~~--~v~v~D~~tl~~ 97 (243)
T 3mbr_X 27 FYLRGHLYESTGET--GRSSVRKVDLETGRILQRAEVPPPYFG---AGIVAWRDRLIQLTWR--NH--EGFVYDLATLTP 97 (243)
T ss_dssp EEETTEEEEEECCT--TSCEEEEEETTTCCEEEEEECCTTCCE---EEEEEETTEEEEEESS--SS--EEEEEETTTTEE
T ss_pred EEECCEEEEECCCC--CCceEEEEECCCCCEEEEEeCCCCcce---eEEEEeCCEEEEEEee--CC--EEEEEECCcCcE
Confidence 34567777543322 235899999998765 56777765422 2466678999888743 33 445555444445
Q ss_pred EEEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 286 HLSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 286 ~~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+.+|.... .+.++.. ++.+++..+ .++|..+|++|.+..+
T Consensus 98 ~~ti~~~~--~Gwglt~dg~~L~vSdg--s~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 98 RARFRYPG--EGWALTSDDSHLYMSDG--TAVIRKLDPDTLQQVG 138 (243)
T ss_dssp EEEEECSS--CCCEEEECSSCEEEECS--SSEEEEECTTTCCEEE
T ss_pred EEEEeCCC--CceEEeeCCCEEEEECC--CCeEEEEeCCCCeEEE
Confidence 66665432 2344444 456777766 7899999999977654
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=89.89 E-value=9.3 Score=33.25 Aligned_cols=114 Identities=12% Similarity=0.045 Sum_probs=67.7
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccc-cccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSA-YMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~-~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
-+|.+|...... ..|.++|+.+.+.. .++.+...... ....++..+|+|.+.... ....+.++-++.....+.
T Consensus 93 ~~g~lyv~~~~~----~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 93 SDEKAYVTQIWD----YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-YQNRILKIDTETDKVVDE 167 (328)
T ss_dssp ETTEEEEEEBSC----SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-TCCEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCC----CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-CCCEEEEEECCCCeEEEE
Confidence 588888765322 37999999998764 56665421110 111455567888776531 245666666555443333
Q ss_pred EEEccCCccceEEEeeCCcEEEEecCC---------CCEEEEEeCCCCcEEE
Q 041631 287 LSVTLLGVEEPLGVWNNGGFFVQSDSR---------PRRLLLYDPNTQEMRD 329 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~~~g~i~~~~~~~---------~~~l~~yd~~t~~~~~ 329 (358)
+.......-+.+..+|++++..... ...++.+|++++++.+
T Consensus 168 --i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 168 --LTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp --EECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred --EEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 3322111234555678888876521 1589999999998875
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.47 E-value=11 Score=33.29 Aligned_cols=192 Identities=6% Similarity=0.005 Sum_probs=93.6
Q ss_pred eEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEec
Q 041631 103 IYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNL 182 (358)
Q Consensus 103 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss 182 (358)
+++.......+.|||..+++....-.... . ......+.+.|..+.+-+.+ .. ...+. +++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----h--~~~v~~~~~~~~~~~~l~s~--~~-------d~~i~---iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG-----P--GDAITGMKFNQFNTNQLFVS--SI-------RGATT---LRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS-----T--TCBEEEEEEETTEEEEEEEE--ET-------TTEEE---EEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC-----c--CCceeEEEeCCCCCCEEEEE--eC-------CCEEE---EEEC
Confidence 33333333346899998876554432210 1 12344555665333332222 11 23455 8887
Q ss_pred CCCCceecccccCeeeeecCCcc-eEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCe
Q 041631 183 RTNSWRDLVCFKTIHYCIPHSHG-CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDS 260 (358)
Q Consensus 183 ~~~~W~~~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~ 260 (358)
.++..+.......... ...+ ...-+|.....+..+ ..|..+|++.+....+....... ..+... +|.
T Consensus 149 ~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~h~~~v----~~~~~~~~~~ 217 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDY---WYCCVDVSVSRQMLATGDST----GRLLLLGLDGHEIFKEKLHKAKV----THAEFNPRCD 217 (383)
T ss_dssp TSCEEEEEECCCCSSC---CEEEEEEETTTTEEEEEETT----SEEEEEETTSCEEEEEECSSSCE----EEEEECSSCT
T ss_pred CCCceEEEeccCCCCC---CeEEEEECCCCCEEEEECCC----CCEEEEECCCCEEEEeccCCCcE----EEEEECCCCC
Confidence 7644433322000000 0011 222345543333333 37888999776666554322110 123333 455
Q ss_pred -EEEEEecCCCcEEEEEEECC--CeeeEEEEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 261 -LSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 261 -L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
+.+.... +..+.||-+.. ..-.....+.......-+.+.. ++..++.... ++.+..||+++++.
T Consensus 218 ~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~-d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 218 WLMATSSV--DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ-RNEIRVYSSYDWSK 285 (383)
T ss_dssp TEEEEEET--TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES-SSEEEEEETTBTTS
T ss_pred CEEEEEeC--CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC-CCcEEEEECCCCcc
Confidence 5554443 57999999886 1122333333222223445555 6766665442 67999999987654
No 35
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=87.02 E-value=13 Score=31.52 Aligned_cols=109 Identities=18% Similarity=0.127 Sum_probs=66.3
Q ss_pred EeCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 208 YLDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
+.+|.+|--+... ....|..+|+.+.+- ..+++|.... ...+...+++|.++... .. .+|+.+-..-.++
T Consensus 50 ~~~~~LyestG~~--g~S~v~~vD~~Tgkv~~~~~l~~~~F---geGit~~g~~ly~ltw~--~~--~v~v~D~~t~~~~ 120 (262)
T 3nol_A 50 YRNGYFYESTGLN--GRSSIRKVDIESGKTLQQIELGKRYF---GEGISDWKDKIVGLTWK--NG--LGFVWNIRNLRQV 120 (262)
T ss_dssp EETTEEEEEEEET--TEEEEEEECTTTCCEEEEEECCTTCC---EEEEEEETTEEEEEESS--SS--EEEEEETTTCCEE
T ss_pred EECCEEEEECCCC--CCceEEEEECCCCcEEEEEecCCccc---eeEEEEeCCEEEEEEee--CC--EEEEEECccCcEE
Confidence 4478887654432 235799999998765 5667765331 12466678898887643 33 3455554344455
Q ss_pred EEEccCCccceEEEeeC-CcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 287 LSVTLLGVEEPLGVWNN-GGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~~~-g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.+|.... ...++..+ +.+++..+ .+.+..+|++|.+...
T Consensus 121 ~ti~~~~--eG~glt~dg~~L~~SdG--s~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 121 RSFNYDG--EGWGLTHNDQYLIMSDG--TPVLRFLDPESLTPVR 160 (262)
T ss_dssp EEEECSS--CCCCEEECSSCEEECCS--SSEEEEECTTTCSEEE
T ss_pred EEEECCC--CceEEecCCCEEEEECC--CCeEEEEcCCCCeEEE
Confidence 6665432 22344344 45666554 6889999999866554
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=87.02 E-value=14 Score=31.94 Aligned_cols=66 Identities=6% Similarity=0.108 Sum_probs=41.6
Q ss_pred CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEEeeC---CcEEEEecCCCCEEEEEeCCCCc
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWNN---GGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~~---g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
++.+.+.... +..+.||-+.. ..|.....+... ....-+.+..+ +.+++.... ++.+..||+++++
T Consensus 171 ~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESSTT
T ss_pred CCCEEEEEeC--CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-CCEEEEEeCCCCC
Confidence 4666555544 56899999986 667777666533 22223444455 666665442 6789999988763
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=85.60 E-value=14 Score=31.53 Aligned_cols=106 Identities=11% Similarity=0.039 Sum_probs=63.3
Q ss_pred EeCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 208 YLDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
+.+|.||--+...+ .|..+|+.+.+. ..+ +|.... ...+...+++|+++... .. .+|+.+-..-.++
T Consensus 62 ~~~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~-l~~~~F---geGit~~g~~Ly~ltw~--~~--~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 62 FHQGHFFESTGHQG----TLRQLSLESAQPVWME-RLGNIF---AEGLASDGERLYQLTWT--EG--LLFTWSGMPPQRE 129 (268)
T ss_dssp EETTEEEEEETTTT----EEEECCSSCSSCSEEE-ECTTCC---EEEEEECSSCEEEEESS--SC--EEEEEETTTTEEE
T ss_pred EECCEEEEEcCCCC----EEEEEECCCCcEEeEE-CCCCcc---eeEEEEeCCEEEEEEcc--CC--EEEEEECCcCcEE
Confidence 34567775443332 499999998765 445 655321 11356668888887643 33 4555554444455
Q ss_pred EEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 287 LSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.+|...+ ...++.. ++.+++..+ .+.+..+|++|.+..+
T Consensus 130 ~ti~~~~--eGwGLt~Dg~~L~vSdG--s~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 130 RTTRYSG--EGWGLCYWNGKLVRSDG--GTMLTFHEPDGFALVG 169 (268)
T ss_dssp EEEECSS--CCCCEEEETTEEEEECS--SSEEEEECTTTCCEEE
T ss_pred EEEeCCC--ceeEEecCCCEEEEECC--CCEEEEEcCCCCeEEE
Confidence 5665422 1233333 455666665 7899999999977665
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=85.52 E-value=18 Score=31.70 Aligned_cols=190 Identities=11% Similarity=0.083 Sum_probs=93.9
Q ss_pred EEEeecC-CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEec
Q 041631 104 YCIFGLR-DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNL 182 (358)
Q Consensus 104 l~l~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss 182 (358)
|.+.... ..+.++|+.+++....-... ....++.+++.. .+-++.. . ....+. +|+.
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~----------~~~~~~~~s~dg-~~l~~~~----~----~~~~v~---~~d~ 145 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTVKTG----------KSPLGLALSPDG-KKLYVTN----N----GDKTVS---VINT 145 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTS-SEEEEEE----T----TTTEEE---EEET
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeCC----------CCcceEEECCCC-CEEEEEe----C----CCCEEE---EEEC
Confidence 4344433 35699999998765433221 122455566643 3322221 1 133455 8888
Q ss_pred CCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEE-ecCCCCcccccccceeEE-CCe
Q 041631 183 RTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQE-VQCPDIASSAYMETLDLY-HDS 260 (358)
Q Consensus 183 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~L~~~-~g~ 260 (358)
.++.....-.....+... ...-+|..-+++.... ..|..+|+.+.+... +...... ..+... +|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~-----~~~~dg~~l~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~g~ 212 (391)
T 1l0q_A 146 VTKAVINTVSVGRSPKGI-----AVTPDGTKVYVANFDS---MSISVIDTVTNSVIDTVKVEAAP-----SGIAVNPEGT 212 (391)
T ss_dssp TTTEEEEEEECCSSEEEE-----EECTTSSEEEEEETTT---TEEEEEETTTTEEEEEEECSSEE-----EEEEECTTSS
T ss_pred CCCcEEEEEecCCCcceE-----EECCCCCEEEEEeCCC---CEEEEEECCCCeEEEEEecCCCc-----cceEECCCCC
Confidence 776443221100111100 2223464333333222 368999998876543 3322111 123333 555
Q ss_pred EEEEEec-CCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 261 LSLLFLN-TTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 261 L~~~~~~-~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
..++... .....+.+|-++... ....+.......-+.+..+|+.++.....++.+..||+++++....
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNK--ITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTE--EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEEecCcCCCcEEEEECCCCe--EEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 4444432 236789999887632 2333332211123445567765544332268999999999887664
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=85.15 E-value=16 Score=30.61 Aligned_cols=112 Identities=12% Similarity=0.144 Sum_probs=65.5
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLS 288 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~ 288 (358)
+|.+|...... ..|..||...+....+..+..... ...++.. +|++.+.... ...+.+|-.+.. ....
T Consensus 131 ~g~l~v~~~~~----~~i~~~~~~g~~~~~~~~~~~~~~--p~~i~~~~~g~l~v~~~~--~~~i~~~~~~g~---~~~~ 199 (286)
T 1q7f_A 131 KGRIIVVECKV----MRVIIFDQNGNVLHKFGCSKHLEF--PNGVVVNDKQEIFISDNR--AHCVKVFNYEGQ---YLRQ 199 (286)
T ss_dssp TSCEEEEETTT----TEEEEECTTSCEEEEEECTTTCSS--EEEEEECSSSEEEEEEGG--GTEEEEEETTCC---EEEE
T ss_pred CCCEEEEECCC----CEEEEEcCCCCEEEEeCCCCccCC--cEEEEECCCCCEEEEECC--CCEEEEEcCCCC---EEEE
Confidence 68877543322 379999988777666654322111 1134444 6887665433 567888765432 1223
Q ss_pred EccC-Cccce--EEEeeCCcEEEEecCCCC-EEEEEeCCCCcEEEeeec
Q 041631 289 VTLL-GVEEP--LGVWNNGGFFVQSDSRPR-RLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 289 i~~~-~~~~p--~~~~~~g~i~~~~~~~~~-~l~~yd~~t~~~~~v~~~ 333 (358)
+... .+..| +++..+|.+++.... .+ .+..||.+++.++.+...
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~-~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNH-NNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECS-SSCEEEEECTTSCEEEEEEES
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCC-CCEEEEEECCCCCEEEEEccc
Confidence 3322 12344 444567888888752 33 899999988777777543
No 40
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=84.74 E-value=17 Score=30.83 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=63.9
Q ss_pred CeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEEEEE
Q 041631 211 GLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKHLSV 289 (358)
Q Consensus 211 G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i 289 (358)
|.+|-.+... ....|..+|+.+.+- ..+++|..... ..+...+++|++.... ... +++.+-..-..+.+|
T Consensus 32 g~Lyvstg~~--~~s~v~~iD~~tg~v~~~i~l~~~~fg---eGi~~~g~~lyv~t~~--~~~--v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 32 DTLFESTGLY--GRSSVRQVALQTGKVENIHKMDDSYFG---EGLTLLNEKLYQVVWL--KNI--GFIYDRRTLSNIKNF 102 (266)
T ss_dssp TEEEEEECST--TTCEEEEEETTTCCEEEEEECCTTCCE---EEEEEETTEEEEEETT--CSE--EEEEETTTTEEEEEE
T ss_pred CeEEEECCCC--CCCEEEEEECCCCCEEEEEecCCCcce---EEEEEeCCEEEEEEec--CCE--EEEEECCCCcEEEEE
Confidence 6777544321 125899999988765 55666653221 1345557788777643 344 455554344455566
Q ss_pred ccCCccceEEEeeC-CcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 290 TLLGVEEPLGVWNN-GGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 290 ~~~~~~~p~~~~~~-g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
... .....++..+ +.+++... .+.+..+|++|.+..+
T Consensus 103 ~~g-~~~g~glt~Dg~~l~vs~g--s~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 103 THQ-MKDGWGLATDGKILYGSDG--TSILYEIDPHTFKLIK 140 (266)
T ss_dssp ECC-SSSCCEEEECSSSEEEECS--SSEEEEECTTTCCEEE
T ss_pred ECC-CCCeEEEEECCCEEEEECC--CCeEEEEECCCCcEEE
Confidence 432 1123445444 56777665 7899999999977554
No 41
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.68 E-value=14 Score=33.37 Aligned_cols=116 Identities=11% Similarity=0.045 Sum_probs=67.2
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEe---cC-CC-C--ccccc-cc-ceeEE--CCeEEEEEecC-----CCcE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEV---QC-PD-I--ASSAY-ME-TLDLY--HDSLSLLFLNT-----TNNH 272 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i---~~-P~-~--~~~~~-~~-~L~~~--~g~L~~~~~~~-----~~~~ 272 (358)
.+|.++|.+..+ .+.++|+.++.-..+ .+ .. . ..... .. .++.. +++|++..... ....
T Consensus 236 ~dG~~~~vs~~g-----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTYTG-----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBTTS-----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeCCC-----EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 478888877643 599999987753322 11 00 0 00001 11 23333 56777765321 1245
Q ss_pred EEEEEECCCeeeEEEEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcEEE
Q 041631 273 YEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 273 l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
=+||+++-..+..+.+|....-..-+.+..+++ .++......+.+.+||.+|++..+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 789999987777777775432112356666765 444432226789999999887665
No 42
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=84.49 E-value=9.1 Score=32.96 Aligned_cols=113 Identities=11% Similarity=0.058 Sum_probs=60.3
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCC--CcEEEEEEECCCeeeE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTT--NNHYEIWVLKERIWSK 285 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~--~~~l~IW~l~~~~W~~ 285 (358)
-+|.+||..... ..|..+|..+.++..+..+... ....+... +|+|.+...... ...+.+|-.+...-..
T Consensus 54 ~~g~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDVFE----GNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TTSCEEEEETTT----CEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCCEEEEECCC----CEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 368888765543 3799999998887765321111 01134444 677776654311 1344444333222111
Q ss_pred EEEEc-cCCccce--EEEeeCCcEEEEecC-----CCCEEEEEeCCCCcEEEe
Q 041631 286 HLSVT-LLGVEEP--LGVWNNGGFFVQSDS-----RPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 286 ~~~i~-~~~~~~p--~~~~~~g~i~~~~~~-----~~~~l~~yd~~t~~~~~v 330 (358)
. +. ......| +.+..+|.+++.... ....|+.||+++++++.+
T Consensus 127 ~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 I--IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp E--ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred E--EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1 11 1111223 444567888887541 025799999988777765
No 43
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.28 E-value=13 Score=33.61 Aligned_cols=109 Identities=6% Similarity=-0.067 Sum_probs=61.8
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC-CeeeE-
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIWSK- 285 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~~- 285 (358)
-+|.+||..... ..|..+|+.+.+...+..... .. .++.. +|...++....... .||+++. ..|..
T Consensus 140 ~~g~lyv~d~~~----~~I~~id~~~g~~~~~~~~~~----~~-~ia~~~~g~~l~~~d~~~~~--~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 140 GNNTVLAYQRDD----PRVRLISVDDNKVTTVHPGFK----GG-KPAVTKDKQRVYSIGWEGTH--TVYVYMKASGWAPT 208 (409)
T ss_dssp STTEEEEEETTT----TEEEEEETTTTEEEEEEETCC----BC-BCEECTTSSEEEEEBSSTTC--EEEEEEGGGTTCEE
T ss_pred CCCCEEEEecCC----CcEEEEECCCCEEEEeeccCC----CC-ceeEecCCCcEEEEecCCCc--eEEEEEcCCCceeE
Confidence 468999876543 379999999887766533211 11 23333 45443333321222 6677665 44442
Q ss_pred -EEEEccCCc--cceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 286 -HLSVTLLGV--EEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 286 -~~~i~~~~~--~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
...+..... ..-+++.. +|.|++... .+.++.||++++..+.+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTCCEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCCCEEEE
Confidence 211212112 22355555 688888655 67899999998876665
No 44
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.21 E-value=18 Score=30.66 Aligned_cols=110 Identities=12% Similarity=0.028 Sum_probs=63.1
Q ss_pred eEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCe
Q 041631 206 CTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERI 282 (358)
Q Consensus 206 ~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~ 282 (358)
+++. +|.+||...... .|..+|..+.+...+..|.... .++.. +|+|.+.. ...+.+|-.+.+.
T Consensus 18 p~w~~~~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~~~~-----~i~~~~dG~l~v~~----~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAK----KVCRWDSFTKQVQRVTMDAPVS-----SVALRQSGGYVATI----GTKFCALNWKEQS 84 (297)
T ss_dssp EEEETTTTEEEEEETTTT----EEEEEETTTCCEEEEECSSCEE-----EEEEBTTSSEEEEE----TTEEEEEETTTTE
T ss_pred CeEECCCCEEEEEECCCC----EEEEEECCCCcEEEEeCCCceE-----EEEECCCCCEEEEE----CCeEEEEECCCCc
Confidence 4444 478999876543 7999999988777766654321 34444 67754433 2455555554455
Q ss_pred eeEEEEEccC-Cccce--EEEeeCCcEEEEecC----------CCCEEEEEeCCCCcEEE
Q 041631 283 WSKHLSVTLL-GVEEP--LGVWNNGGFFVQSDS----------RPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 283 W~~~~~i~~~-~~~~p--~~~~~~g~i~~~~~~----------~~~~l~~yd~~t~~~~~ 329 (358)
+......... +..+| +.+..+|.+++.... ....++.+|.+. +.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~ 143 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKK 143 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEE
Confidence 5544433211 22233 444567888886521 124788888864 4444
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=83.19 E-value=17 Score=30.24 Aligned_cols=110 Identities=9% Similarity=0.035 Sum_probs=61.2
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLS 288 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~ 288 (358)
+|.+|+..... ..|..+|. +.++..+..|..... ...+... +|.|.+.... ...+.+|-. ++.... ..
T Consensus 151 ~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~~~~~~~--~~~i~~~~~g~l~v~~~~--~~~i~~~~~-~g~~~~-~~ 219 (299)
T 2z2n_A 151 DNALWFTENQN----NAIGRITE-SGDITEFKIPTPASG--PVGITKGNDDALWFVEII--GNKIGRITT-SGEITE-FK 219 (299)
T ss_dssp TSCEEEEETTT----TEEEEECT-TCCEEEEECSSTTCC--EEEEEECTTSSEEEEETT--TTEEEEECT-TCCEEE-EE
T ss_pred CCCEEEEeCCC----CEEEEEcC-CCcEEEeeCCCCCCc--ceeEEECCCCCEEEEccC--CceEEEECC-CCcEEE-EE
Confidence 57787644322 37999999 777776655533211 1134443 5777655432 445555554 333322 11
Q ss_pred EccCCccce--EEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeeec
Q 041631 289 VTLLGVEEP--LGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 289 i~~~~~~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~~ 333 (358)
+ +.....| +.+..+|.+++.... .+.+..||+ +++++.+...
T Consensus 220 ~-~~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 220 I-PTPNARPHAITAGAGIDLWFTEWG-ANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp C-SSTTCCEEEEEECSTTCEEEEETT-TTEEEEEET-TTEEEEEECS
T ss_pred C-CCCCCCceeEEECCCCCEEEeccC-CceEEEECC-CCceEEEeCC
Confidence 1 1123334 444457888887631 578999999 4677666543
No 46
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.54 E-value=21 Score=30.06 Aligned_cols=194 Identities=12% Similarity=0.116 Sum_probs=100.9
Q ss_pred eEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEec
Q 041631 103 IYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNL 182 (358)
Q Consensus 103 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss 182 (358)
|+........++++||.++ ...+..+. ....++.+++... ++.. .. . ...+. +|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~----------~~~~~l~~~~dg~---l~v~-~~-~-----~~~i~---~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS----------HHQNGHCLNKQGH---LIAC-SH-G-----LRRLE---RQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC----------SSEEEEEECTTCC---EEEE-ET-T-----TTEEE---EECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC----------CCcceeeECCCCc---EEEE-ec-C-----CCeEE---EEcC
Confidence 3443334445699999988 55544322 1234666676432 2211 11 1 23455 7887
Q ss_pred CCCCceeccc-ccCeeeeecCCcc--eEEeCCeEEEEEeec-------------CCCceEEEEEECCCceEEEecCCCCc
Q 041631 183 RTNSWRDLVC-FKTIHYCIPHSHG--CTYLDGLCHWLWELE-------------DSKHKIIISFDMANEVFQEVQCPDIA 246 (358)
Q Consensus 183 ~~~~W~~~~~-~~~~~~~~~~~~~--~v~~~G~lywl~~~~-------------~~~~~~il~fD~~~e~~~~i~~P~~~ 246 (358)
.++..+.... ....+. .... .+--+|.+|+..... ......|..+|.. .+...+.-....
T Consensus 98 ~~g~~~~~~~~~~~~~~---~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKL---NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp TTCCEEEEECEETTEEC---CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred CCCcEEEEeeccCCCCC---CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 7776654432 011111 1112 333468877642210 0012479999987 555544221110
Q ss_pred ccccccceeEE-CCeEEEEEecCCCcEEEEEEECC-Cee-eEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeC
Q 041631 247 SSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIW-SKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDP 322 (358)
Q Consensus 247 ~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W-~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~ 322 (358)
...++.. +|++. +... ....+.+|-+++ +.. .....+... ....-+++..+|.+++.. .+.|..||+
T Consensus 174 ----~~gi~~s~dg~~l-v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~ 244 (296)
T 3e5z_A 174 ----PNGLAFLPSGNLL-VSDT-GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA---GDGVHVLTP 244 (296)
T ss_dssp ----EEEEEECTTSCEE-EEET-TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE---TTEEEEECT
T ss_pred ----CccEEECCCCCEE-EEeC-CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc---CCeEEEECC
Confidence 0134443 66665 4432 357888888874 555 333333111 122235566788888876 378999999
Q ss_pred CCCcEEEeeec
Q 041631 323 NTQEMRDLGLR 333 (358)
Q Consensus 323 ~t~~~~~v~~~ 333 (358)
+++.++.+...
T Consensus 245 ~g~~~~~~~~~ 255 (296)
T 3e5z_A 245 DGDELGRVLTP 255 (296)
T ss_dssp TSCEEEEEECS
T ss_pred CCCEEEEEECC
Confidence 98777776543
No 47
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=82.39 E-value=29 Score=31.61 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=63.3
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCe-EEEEEecCC-CcEEEEEEECCCeeeEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDS-LSLLFLNTT-NNHYEIWVLKERIWSKH 286 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~-L~~~~~~~~-~~~l~IW~l~~~~W~~~ 286 (358)
+|.||+.... ..|..||+.+.+...+..+.. ....+... +|+ |.+...... .....+|...++.|...
T Consensus 149 ~g~Lyv~d~~-----~~I~~id~~~~~v~~~~~~~~----~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 149 HNHLYLVGEQ-----HPTRLIDFEKEYVSTVYSGLS----KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp EEEEEEEEBT-----EEEEEEETTTTEEEEEECCCS----CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred CCeEEEEeCC-----CcEEEEECCCCEEEEEecCCC----CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 3789976553 479999999988776532111 11134443 566 655554322 23345555555555533
Q ss_pred EEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 287 LSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
..+.......-+++.. +|.|++.... .++++.||+++++...+
T Consensus 220 ~~l~~~~~p~giavdp~~g~lyv~d~~-~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 220 TELTKGQNCNGAETHPINGELYFNSWN-AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp EEEEECSSCCCEEECTTTCCEEEEETT-TTEEEEEETTTTEEEEE
T ss_pred eeeccCCCceEEEEeCCCCEEEEEECC-CCEEEEEECCCCcEEEE
Confidence 3332111112244555 6888887642 57899999998877444
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.23 E-value=20 Score=30.43 Aligned_cols=111 Identities=9% Similarity=0.027 Sum_probs=58.8
Q ss_pred CCe-EEEEEeecCCCceEEEEEECC--CceEEEe-cCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC-Cee
Q 041631 210 DGL-CHWLWELEDSKHKIIISFDMA--NEVFQEV-QCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIW 283 (358)
Q Consensus 210 ~G~-lywl~~~~~~~~~~il~fD~~--~e~~~~i-~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W 283 (358)
+|. +|...... ..|..||+. +.++..+ .++.... ...+... +|+..++... ....+.+|-+++ ...
T Consensus 48 dg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~ 119 (343)
T 1ri6_A 48 DKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGS---LTHISTDHQGQFVFVGSY-NAGNVSVTRLEDGLPV 119 (343)
T ss_dssp TSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSC---CSEEEECTTSSEEEEEET-TTTEEEEEEEETTEEE
T ss_pred CCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCCC---CcEEEEcCCCCEEEEEec-CCCeEEEEECCCCccc
Confidence 565 55443322 267777776 6565543 2221111 1133333 5664444433 357899999854 233
Q ss_pred eEEEEEccCCccceEEEeeCCc-EEEEe-cCCCCEEEEEeCCC-CcEEEe
Q 041631 284 SKHLSVTLLGVEEPLGVWNNGG-FFVQS-DSRPRRLLLYDPNT-QEMRDL 330 (358)
Q Consensus 284 ~~~~~i~~~~~~~p~~~~~~g~-i~~~~-~~~~~~l~~yd~~t-~~~~~v 330 (358)
.....+........+.+..+|+ +++.. . ++.+..||+++ ++++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 120 GVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp EEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEE
T ss_pred cccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEecCCCceeee
Confidence 3344443322233355556665 44444 3 67899999987 776643
No 49
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=82.14 E-value=23 Score=30.25 Aligned_cols=106 Identities=10% Similarity=-0.007 Sum_probs=58.4
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC--CeeeE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE--RIWSK 285 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~ 285 (358)
-+|.+||..... ..|..+|..++.-..+..+... ..++.. +|+|.+.... .....|+.++. +....
T Consensus 41 ~~g~lyv~d~~~----~~I~~~d~~g~~~~~~~~~~~p-----~gia~~~dG~l~vad~~--~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 41 PDGTIFVTNHEV----GEIVSITPDGNQQIHATVEGKV-----SGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp TTSCEEEEETTT----TEEEEECTTCCEEEEEECSSEE-----EEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEE
T ss_pred CCCCEEEEeCCC----CeEEEECCCCceEEEEeCCCCc-----eeEEEcCCCcEEEEecc--CCcceEEEEcCCCCeEEE
Confidence 368999876443 3799999988655555544311 134444 6887665533 22345666543 55444
Q ss_pred EEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCc
Q 041631 286 HLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 286 ~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
...+.......-++.+.++.+++.... .+.++.+|+.+++
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~-~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSY-RGAIWLIDVVQPS 149 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETT-TTEEEEEETTTTE
T ss_pred EEeCCCccccCcccccCCCcEEEEECC-CCeEEEEeCCCCc
Confidence 433321111111223456666665422 5789999988653
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=81.89 E-value=28 Score=31.11 Aligned_cols=203 Identities=9% Similarity=0.047 Sum_probs=94.1
Q ss_pred EEee-eecceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccce
Q 041631 95 VLGG-PYDGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHE 173 (358)
Q Consensus 95 ~~~~-s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 173 (358)
.+++ |.+++|...- .+.++|||..|++...+-.... . ......+.+.|. +.|-+++ .. ...
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~-----~--~~~V~sv~fspd-g~~lasg--s~-------Dg~ 170 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ-----P--GEYISSVAWIKE-GNYLAVG--TS-------SAE 170 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS-----T--TCCEEEEEECTT-SSEEEEE--ET-------TSC
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC-----C--CCcEEEEEECCC-CCEEEEE--EC-------CCe
Confidence 3444 4567665544 3356999999998765533221 1 122344555663 3444332 11 334
Q ss_pred eeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 174 FSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 174 ~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
+. +++..++.-...-.... ..-.++..+|.+-..+... ..+..+|..........+....... ..
T Consensus 171 v~---iWd~~~~~~~~~~~~h~------~~v~~~s~~~~~l~sgs~d----~~i~~~d~~~~~~~~~~~~~h~~~~--~~ 235 (420)
T 4gga_A 171 VQ---LWDVQQQKRLRNMTSHS------ARVGSLSWNSYILSSGSRS----GHIHHHDVRVAEHHVATLSGHSQEV--CG 235 (420)
T ss_dssp EE---EEETTTTEEEEEECCCS------SCEEEEEEETTEEEEEETT----SEEEEEETTSSSCEEEEEECCSSCE--EE
T ss_pred EE---EEEcCCCcEEEEEeCCC------CceEEEeeCCCEEEEEeCC----CceeEeeecccceeeEEecccccce--ee
Confidence 56 88887653211110000 0001344455443222222 3567777665433221111111000 02
Q ss_pred eeEE-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEEee-CCcEEEE-ecCCCCEEEEEeCCCCcE
Q 041631 254 LDLY-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWN-NGGFFVQ-SDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 254 L~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~-~g~i~~~-~~~~~~~l~~yd~~t~~~ 327 (358)
+... +|+..+.... +..+.||-... ..+......... .....+.+.. ++.++.. .+..++.+..||+++++.
T Consensus 236 ~~~~~~g~~l~s~~~--D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~ 313 (420)
T 4gga_A 236 LRWAPDGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 313 (420)
T ss_dssp EEECTTSSEEEEEET--TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE
T ss_pred eeecCCCCeeeeeec--cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc
Confidence 2222 5555554443 57889998876 223222222211 1111222222 3445544 333367899999998876
Q ss_pred EEeee
Q 041631 328 RDLGL 332 (358)
Q Consensus 328 ~~v~~ 332 (358)
.....
T Consensus 314 ~~~~~ 318 (420)
T 4gga_A 314 LSAVD 318 (420)
T ss_dssp EEEEE
T ss_pred ceeec
Confidence 66543
No 51
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=81.75 E-value=23 Score=30.01 Aligned_cols=137 Identities=11% Similarity=0.107 Sum_probs=78.3
Q ss_pred cceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCce-EEEecCCCCcccc
Q 041631 171 LHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEV-FQEVQCPDIASSA 249 (358)
Q Consensus 171 ~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~ 249 (358)
...+. +++..++.=...-..+.-++ .......++.+|-++...+ .+.+||..+.+ ...++.+.+.
T Consensus 64 ~S~v~---~vD~~Tgkv~~~~~l~~~~F----geGit~~g~~ly~ltw~~~----~v~v~D~~t~~~~~ti~~~~eG--- 129 (262)
T 3nol_A 64 RSSIR---KVDIESGKTLQQIELGKRYF----GEGISDWKDKIVGLTWKNG----LGFVWNIRNLRQVRSFNYDGEG--- 129 (262)
T ss_dssp EEEEE---EECTTTCCEEEEEECCTTCC----EEEEEEETTEEEEEESSSS----EEEEEETTTCCEEEEEECSSCC---
T ss_pred CceEE---EEECCCCcEEEEEecCCccc----eeEEEEeCCEEEEEEeeCC----EEEEEECccCcEEEEEECCCCc---
Confidence 34566 88888864322211111110 0113445678988876553 89999998754 4667775421
Q ss_pred cccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC----Cccce--EEEeeCCcEEEEecCCCCEEEEEeCC
Q 041631 250 YMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL----GVEEP--LGVWNNGGFFVQSDSRPRRLLLYDPN 323 (358)
Q Consensus 250 ~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~----~~~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~ 323 (358)
..|..-+++|.+.. +.. .||+++-..-....+|... ++..+ +. +.+|+|+..... .+.+...|++
T Consensus 130 --~glt~dg~~L~~Sd---Gs~--~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe-~~~G~lyan~w~-~~~I~vIDp~ 200 (262)
T 3nol_A 130 --WGLTHNDQYLIMSD---GTP--VLRFLDPESLTPVRTITVTAHGEELPELNELE-WVDGEIFANVWQ-TNKIVRIDPE 200 (262)
T ss_dssp --CCEEECSSCEEECC---SSS--EEEEECTTTCSEEEEEECEETTEECCCEEEEE-EETTEEEEEETT-SSEEEEECTT
T ss_pred --eEEecCCCEEEEEC---CCC--eEEEEcCCCCeEEEEEEeccCCccccccceeE-EECCEEEEEEcc-CCeEEEEECC
Confidence 13444455555532 122 4788877333344555432 22222 22 347888877643 6799999999
Q ss_pred CCcEEEe
Q 041631 324 TQEMRDL 330 (358)
Q Consensus 324 t~~~~~v 330 (358)
|+++...
T Consensus 201 tG~V~~~ 207 (262)
T 3nol_A 201 TGKVTGI 207 (262)
T ss_dssp TCBEEEE
T ss_pred CCcEEEE
Confidence 9998775
No 52
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=81.37 E-value=27 Score=31.93 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=63.1
Q ss_pred CcceEEeC-----CeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCC-cEEEE
Q 041631 203 SHGCTYLD-----GLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTN-NHYEI 275 (358)
Q Consensus 203 ~~~~v~~~-----G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~-~~l~I 275 (358)
.+.++.++ |.|||.... ..|..+|+.+.+...+..+.. ....++.. +|.|.+....... ..-.+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-----~~I~~id~~~g~v~~~~~~~~----~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-----DAFRHVDFVNQYVDIKTTNIG----QCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-----SCEEEEETTTTEEEEECCCCS----CEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred CCceEEEccccCCCEEEEEeCC-----CCEEEEECCCCEEEEeecCCC----CccEEEECCCCCEEEEcCCCCcccceEE
Confidence 34466666 899986543 369999998888876643211 11134444 6776665532111 22233
Q ss_pred EEECCCeeeEEEEEccCCccce--EEEee-CCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 276 WVLKERIWSKHLSVTLLGVEEP--LGVWN-NGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 276 W~l~~~~W~~~~~i~~~~~~~p--~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
+...+..|.....+. .+..| +++.. +|.|++.... .+.++.||++++++
T Consensus 211 ~~~~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~-~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 211 LFTRASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYH-HAMISSYDPATGTL 262 (433)
T ss_dssp EECGGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTT-CSEEEEECTTTCCE
T ss_pred EEECCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECC-CCEEEEEECCCCeE
Confidence 333333343222222 22233 44555 6788877542 56899999987776
No 53
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=81.35 E-value=24 Score=29.98 Aligned_cols=109 Identities=12% Similarity=-0.032 Sum_probs=66.7
Q ss_pred EEeCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeE
Q 041631 207 TYLDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSK 285 (358)
Q Consensus 207 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~ 285 (358)
...++.+|-++... ..+.+||..+.+- ..++.+.+ +..|..-+++|.+.. +.. .|++++-..=..
T Consensus 102 t~~g~~Ly~ltw~~----~~v~V~D~~Tl~~~~ti~~~~e-----GwGLt~Dg~~L~vSd---Gs~--~l~~iDp~T~~v 167 (268)
T 3nok_A 102 ASDGERLYQLTWTE----GLLFTWSGMPPQRERTTRYSGE-----GWGLCYWNGKLVRSD---GGT--MLTFHEPDGFAL 167 (268)
T ss_dssp EECSSCEEEEESSS----CEEEEEETTTTEEEEEEECSSC-----CCCEEEETTEEEEEC---SSS--EEEEECTTTCCE
T ss_pred EEeCCEEEEEEccC----CEEEEEECCcCcEEEEEeCCCc-----eeEEecCCCEEEEEC---CCC--EEEEEcCCCCeE
Confidence 34456888876655 3899999988654 56776532 124555566666643 123 577777633334
Q ss_pred EEEEccC----CccceEEE-eeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 286 HLSVTLL----GVEEPLGV-WNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 286 ~~~i~~~----~~~~p~~~-~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
..+|... ++..+..+ +.+|+|+..... .+.+...|++|+++...
T Consensus 168 ~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~-s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 168 VGAVQVKLRGQPVELINELECANGVIYANIWH-SSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EEEEECEETTEECCCEEEEEEETTEEEEEETT-CSEEEEECTTTCBEEEE
T ss_pred EEEEEeCCCCcccccccccEEeCCEEEEEECC-CCeEEEEeCCCCcEEEE
Confidence 4444432 22222211 347888877643 67999999999998764
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.38 E-value=31 Score=30.54 Aligned_cols=115 Identities=5% Similarity=-0.071 Sum_probs=61.5
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEE-e-cCCCCcccccccceeEE-CCeEEEEEec-CCCcEEEEEEECC-Ceee
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQE-V-QCPDIASSAYMETLDLY-HDSLSLLFLN-TTNNHYEIWVLKE-RIWS 284 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~~~~L~~~-~g~L~~~~~~-~~~~~l~IW~l~~-~~W~ 284 (358)
+|.....+..+ ..|..+|+++.+... + ....... ...+... +|++.+.... .....+.||-+.. ..=.
T Consensus 187 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 187 DGALICTSCRD----KRVRVIEPRKGTVVAEKDRPHEGTR---PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp TSSCEEEEETT----SEEEEEETTTTEEEEEEECSSCSSS---CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred CCCEEEEEecC----CcEEEEeCCCCceeeeeccCCCCCc---ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc
Confidence 55544333333 378999998876533 3 2222110 0123333 6776555521 2468999999886 2212
Q ss_pred EEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCc--EEEee
Q 041631 285 KHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQE--MRDLG 331 (358)
Q Consensus 285 ~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~--~~~v~ 331 (358)
....+....-..-+.+..++..++.....++.+.+||+++++ +..+.
T Consensus 260 ~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 260 SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 222222222222345556776665433226789999999887 66554
No 55
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=80.37 E-value=23 Score=29.51 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=61.3
Q ss_pred eEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCe
Q 041631 206 CTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERI 282 (358)
Q Consensus 206 ~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~ 282 (358)
++.. +|.+|+..... ..|..||.. .++..+.+|..... ...+... +|.+.+.... ...+..+-.+ +.
T Consensus 24 ~i~~d~~g~l~v~~~~~----~~v~~~~~~-~~~~~~~~~~~~~~--~~~i~~~~~g~l~v~~~~--~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKA----NKISSLDQS-GRIKEFEVPTPDAK--VMCLIVSSLGDIWFTENG--ANKIGKLSKK-GG 93 (300)
T ss_dssp EEEECTTSCEEEEETTT----TEEEEECTT-SCEEEEECSSTTCC--EEEEEECTTSCEEEEETT--TTEEEEECTT-SC
T ss_pred eeeECCCCCEEEEcCCC----CeEEEECCC-CceEEEECCCCCCc--ceeEEECCCCCEEEEecC--CCeEEEECCC-CC
Confidence 4444 58887654333 379999998 77777766643211 1134443 5777665432 3444443333 43
Q ss_pred eeEEEEEccCCccceE--EEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 283 WSKHLSVTLLGVEEPL--GVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 283 W~~~~~i~~~~~~~p~--~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
+. ...+. .....|. .+..+|.+++.... .+.++.||++ ++++.+.
T Consensus 94 ~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 94 FT-EYPLP-QPDSGPYGITEGLNGDIWFTQLN-GDRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp EE-EEECS-STTCCEEEEEECSTTCEEEEETT-TTEEEEECTT-SCEEEEE
T ss_pred eE-EecCC-CCCCCCccceECCCCCEEEEccC-CCeEEEECCC-CCEEEcc
Confidence 32 12221 1123343 33457888887642 4689999998 6666554
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=80.11 E-value=31 Score=30.52 Aligned_cols=191 Identities=9% Similarity=0.051 Sum_probs=93.4
Q ss_pred cceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEE
Q 041631 101 DGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIY 180 (358)
Q Consensus 101 ~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vy 180 (358)
++.++.......+.|||..+++...+-.... ......+.+.|. +.+-+++ .. ...+. +|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~--------~~~v~~v~~s~~-~~~l~~~--~~-------dg~i~---iw 161 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE--------STYVASVKWSHD-GSFLSVG--LG-------NGLVD---IY 161 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT--------TCCEEEEEECTT-SSEEEEE--ET-------TSCEE---EE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC--------CCCEEEEEECCC-CCEEEEE--CC-------CCeEE---EE
Confidence 3444434444457999999988765543321 123345566663 3433322 11 23455 88
Q ss_pred ecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCce--EEEecCCCCcccccccceeEE-
Q 041631 181 NLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEV--FQEVQCPDIASSAYMETLDLY- 257 (358)
Q Consensus 181 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~L~~~- 257 (358)
+..++.-...-.... ..-..+..+|.....+... ..|..+|+++.. ...+...... -..+...
T Consensus 162 d~~~~~~~~~~~~~~------~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~~ 227 (401)
T 4aez_A 162 DVESQTKLRTMAGHQ------ARVGCLSWNRHVLSSGSRS----GAIHHHDVRIANHQIGTLQGHSSE----VCGLAWRS 227 (401)
T ss_dssp ETTTCCEEEEECCCS------SCEEEEEEETTEEEEEETT----SEEEEEETTSSSCEEEEEECCSSC----EEEEEECT
T ss_pred ECcCCeEEEEecCCC------CceEEEEECCCEEEEEcCC----CCEEEEecccCcceeeEEcCCCCC----eeEEEEcC
Confidence 887654222111000 0001344466544444333 378889987432 2222221110 0023322
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCC-cEEEEec-CCCCEEEEEeCCCCcEEEe
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNG-GFFVQSD-SRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g-~i~~~~~-~~~~~l~~yd~~t~~~~~v 330 (358)
+|...+.... +..+.||-+... .....+... ....-+.+..++ .++.... ..++.+..||+++++....
T Consensus 228 ~~~~l~s~~~--d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 228 DGLQLASGGN--DNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp TSSEEEEEET--TSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeC--CCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE
Confidence 5665555543 578999988762 122233221 222234444443 5555432 1367899999988776554
No 57
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=79.51 E-value=28 Score=30.04 Aligned_cols=105 Identities=11% Similarity=0.118 Sum_probs=59.0
Q ss_pred CeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEE
Q 041631 211 GLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSV 289 (358)
Q Consensus 211 G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i 289 (358)
|.+||...... .|..+|..+.+...+..|.... .+... +|++.+.. . ..+.+|-.+.+........
T Consensus 61 ~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~~v~-----~i~~~~dg~l~v~~-~---~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 61 GTAWWFNILER----ELHELHLASGRKTVHALPFMGS-----ALAKISDSKQLIAS-D---DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp TEEEEEEGGGT----EEEEEETTTTEEEEEECSSCEE-----EEEEEETTEEEEEE-T---TEEEEEETTTCCEEEEECS
T ss_pred CEEEEEECCCC----EEEEEECCCCcEEEEECCCcce-----EEEEeCCCeEEEEE-C---CCEEEEECCCCcEEEEeeC
Confidence 78999876543 7999999998887776653211 34433 78876654 2 2344444333544433221
Q ss_pred cc-CCccc--eEEEeeCCcEEEEecC-----CCCEEEEEeCCCCcEEEe
Q 041631 290 TL-LGVEE--PLGVWNNGGFFVQSDS-----RPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 290 ~~-~~~~~--p~~~~~~g~i~~~~~~-----~~~~l~~yd~~t~~~~~v 330 (358)
.. ..... -+.+..+|.+++.... ....|+.|| +++++.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 11 11122 2444557888876531 125789998 4666654
No 58
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=78.77 E-value=28 Score=29.13 Aligned_cols=138 Identities=13% Similarity=0.045 Sum_probs=79.7
Q ss_pred cceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccc
Q 041631 171 LHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSA 249 (358)
Q Consensus 171 ~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~ 249 (358)
...+. +++..++.=......+..++ .......++.+|-++...+ .+.+||..+-+- ..++.|..
T Consensus 42 ~S~v~---~vD~~tgkv~~~~~l~~~~f----geGi~~~~~~ly~ltw~~~----~v~v~D~~tl~~~~ti~~~~~---- 106 (243)
T 3mbr_X 42 RSSVR---KVDLETGRILQRAEVPPPYF----GAGIVAWRDRLIQLTWRNH----EGFVYDLATLTPRARFRYPGE---- 106 (243)
T ss_dssp SCEEE---EEETTTCCEEEEEECCTTCC----EEEEEEETTEEEEEESSSS----EEEEEETTTTEEEEEEECSSC----
T ss_pred CceEE---EEECCCCCEEEEEeCCCCcc----eeEEEEeCCEEEEEEeeCC----EEEEEECCcCcEEEEEeCCCC----
Confidence 34566 88888864332221111111 1113456789998876553 899999988654 56776642
Q ss_pred cccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC----CccceEEE-eeCCcEEEEecCCCCEEEEEeCCC
Q 041631 250 YMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL----GVEEPLGV-WNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 250 ~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~----~~~~p~~~-~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
+..|..-+++|.+.. +.. .|++++-..=....+|... ++.....+ +.+|+|+..... .+.+...|++|
T Consensus 107 -Gwglt~dg~~L~vSd---gs~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~-s~~I~vIDp~t 179 (243)
T 3mbr_X 107 -GWALTSDDSHLYMSD---GTA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWL-TSRIARIDPAS 179 (243)
T ss_dssp -CCEEEECSSCEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT-TTEEEEECTTT
T ss_pred -ceEEeeCCCEEEEEC---CCC--eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECC-CCeEEEEECCC
Confidence 114554466666643 233 3777776333344444432 22222221 248888877643 67999999999
Q ss_pred CcEEEe
Q 041631 325 QEMRDL 330 (358)
Q Consensus 325 ~~~~~v 330 (358)
+++...
T Consensus 180 G~V~~~ 185 (243)
T 3mbr_X 180 GKVVAW 185 (243)
T ss_dssp CBEEEE
T ss_pred CCEEEE
Confidence 998765
No 59
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=78.59 E-value=23 Score=29.13 Aligned_cols=107 Identities=13% Similarity=0.171 Sum_probs=59.4
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLS 288 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~ 288 (358)
+|.+|+... . ..|..||..+.....+..+... ....+... +|+|.+.... ...+.+| +.+.......
T Consensus 77 ~g~l~v~~~-~----~~i~~~d~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~~--~~~i~~~--~~~~~~~~~~ 144 (270)
T 1rwi_B 77 AGTVYVTDF-N----NRVVTLAAGSNNQTVLPFDGLN---YPEGLAVDTQGAVYVADRG--NNRVVKL--AAGSKTQTVL 144 (270)
T ss_dssp TCCEEEEET-T----TEEEEECTTCSCCEECCCCSCS---SEEEEEECTTCCEEEEEGG--GTEEEEE--CTTCCSCEEC
T ss_pred CCCEEEEcC-C----CEEEEEeCCCceEeeeecCCcC---CCcceEECCCCCEEEEECC--CCEEEEE--ECCCceeEee
Confidence 578776554 3 3799999988776655332211 11134444 6776665533 3455555 3322211111
Q ss_pred EccCCccce--EEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 289 VTLLGVEEP--LGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 289 i~~~~~~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
.......| +++..+|.+++.... .+.+..||++++.....
T Consensus 145 -~~~~~~~p~~i~~~~~g~l~v~~~~-~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 145 -PFTGLNDPDGVAVDNSGNVYVTDTD-NNRVVKLEAESNNQVVL 186 (270)
T ss_dssp -CCCSCCSCCCEEECTTCCEEEEEGG-GTEEEEECTTTCCEEEC
T ss_pred -ccccCCCceeEEEeCCCCEEEEECC-CCEEEEEecCCCceEee
Confidence 11122223 555567888877642 46899999998776554
No 60
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=78.16 E-value=35 Score=29.90 Aligned_cols=109 Identities=6% Similarity=0.040 Sum_probs=59.6
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCceEEE-ecCCCCcc------cccccceeEECCeEEEEEecCCCcEEEEEEE
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQE-VQCPDIAS------SAYMETLDLYHDSLSLLFLNTTNNHYEIWVL 278 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~------~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l 278 (358)
++..+|.+|..... ..|.+||..+.+..+ ..++.... ..........+|.+.+... ...+..+-.
T Consensus 49 p~v~~~~v~~~~~~-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~ 120 (376)
T 3q7m_A 49 PALADNVVYAADRA-----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNT 120 (376)
T ss_dssp CEEETTEEEEECTT-----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEET
T ss_pred cEEECCEEEEEcCC-----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEEC
Confidence 78889999965433 279999997654332 33432210 0000133445777766542 234444444
Q ss_pred CC--CeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 279 KE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 279 ~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
+. ..|... +.......|+. .++.+++... ++.++.||.++++..
T Consensus 121 ~tG~~~W~~~--~~~~~~~~p~~--~~~~v~v~~~--~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 121 SDGTVAWQTK--VAGEALSRPVV--SDGLVLIHTS--NGQLQALNEADGAVK 166 (376)
T ss_dssp TTCCEEEEEE--CSSCCCSCCEE--ETTEEEEECT--TSEEEEEETTTCCEE
T ss_pred CCCCEEEEEe--CCCceEcCCEE--ECCEEEEEcC--CCeEEEEECCCCcEE
Confidence 33 456442 21111233433 3677777766 678999999888754
No 61
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=77.84 E-value=25 Score=31.30 Aligned_cols=112 Identities=13% Similarity=0.023 Sum_probs=59.9
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccc-c-ceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYM-E-TLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~-~-~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
+|.++.....+ ..|..+|+.+.+......+........ . .+... +|++.+.... ...+.+|-++...-.
T Consensus 133 ~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--d~~v~~~d~~~~~~~-- 204 (433)
T 3bws_A 133 NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ--ANAVHVFDLKTLAYK-- 204 (433)
T ss_dssp SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG--GTEEEEEETTTCCEE--
T ss_pred CCeEEEEeCCC----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC--CCEEEEEECCCceEE--
Confidence 55665443322 258899999877654322111111111 0 23322 6776665543 578999998763222
Q ss_pred EEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 287 LSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 287 ~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
..+... ....-+.+..++..++.....++.+..||+++++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 222221 1222345556666554433226789999998887654
No 62
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=77.45 E-value=36 Score=29.71 Aligned_cols=189 Identities=14% Similarity=0.065 Sum_probs=92.6
Q ss_pred EEEeecC-CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEec
Q 041631 104 YCIFGLR-DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNL 182 (358)
Q Consensus 104 l~l~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss 182 (358)
+++.... ..+.+||..+++....-... .....+.++|.. .+-++. . . . ...+. +++.
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~----------~~~~~~~~s~dg-~~l~~~-~-~-~-----d~~i~---v~d~ 61 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVG----------SNPMGAVISPDG-TKVYVA-N-A-H-----SNDVS---IIDT 61 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTS-SEEEEE-E-G-G-----GTEEE---EEET
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecC----------CCcceEEECCCC-CEEEEE-C-C-C-----CCeEE---EEEC
Confidence 3344333 34599999988765432211 112445555543 222221 1 0 1 33456 8888
Q ss_pred CCCCceecccccCeeeeecCCcceEEeCCe-EEEEEeecCCCceEEEEEECCCceEEE-ecCCCCcccccccceeEE-CC
Q 041631 183 RTNSWRDLVCFKTIHYCIPHSHGCTYLDGL-CHWLWELEDSKHKIIISFDMANEVFQE-VQCPDIASSAYMETLDLY-HD 259 (358)
Q Consensus 183 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~L~~~-~g 259 (358)
.++.-...-.....+..+ ...-+|. +|...... ..|..+|+.+.+... +...... ..+... +|
T Consensus 62 ~~~~~~~~~~~~~~v~~~-----~~spdg~~l~~~~~~~----~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~s~dg 127 (391)
T 1l0q_A 62 ATNNVIATVPAGSSPQGV-----AVSPDGKQVYVTNMAS----STLSVIDTTSNTVAGTVKTGKSP-----LGLALSPDG 127 (391)
T ss_dssp TTTEEEEEEECSSSEEEE-----EECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEECSSSE-----EEEEECTTS
T ss_pred CCCeEEEEEECCCCccce-----EECCCCCEEEEEECCC----CEEEEEECCCCeEEEEEeCCCCc-----ceEEECCCC
Confidence 776433221101111100 2222465 44333222 379999998876543 3332211 133333 56
Q ss_pred eEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 260 SLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 260 ~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
+..++... ....+.+|-+..+........ ..-...+.+..+|..++.....++.+..||+++++.....
T Consensus 128 ~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 196 (391)
T 1l0q_A 128 KKLYVTNN-GDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV 196 (391)
T ss_dssp SEEEEEET-TTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEeC-CCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 54433332 357899998876443333222 1111344455566555433322678999999998766543
No 63
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=76.52 E-value=34 Score=29.42 Aligned_cols=162 Identities=10% Similarity=0.039 Sum_probs=74.4
Q ss_pred cceEEEeec--CCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEE
Q 041631 101 DGIYCIFGL--RDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCT 178 (358)
Q Consensus 101 ~GLl~l~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~ 178 (358)
+|.+.+.+. ..++.++++..+....+..................++.+|+..+..-|.. . ....+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d-----~----~~~~I~--- 221 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD-----R----ENGRIQ--- 221 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE-----T----TTTEEE---
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE-----C----CCCEEE---
Confidence 777777764 34558888654444444321110000001123346777787644422221 1 144566
Q ss_pred EEecCCCCceecccc---cCeeeeecCCcc-eEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccce
Q 041631 179 IYNLRTNSWRDLVCF---KTIHYCIPHSHG-CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETL 254 (358)
Q Consensus 179 vyss~~~~W~~~~~~---~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L 254 (358)
+|+..++.....-.. ..-+..+...+. .+..+|.+|... .....|..+|..+.+....-.+..........+
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~i 297 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD----QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDI 297 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC----SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc----CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEE
Confidence 888876654332110 011111100011 333344433211 112478999988776654322211111111145
Q ss_pred eEE-CCeEEEEEecCCCcEEEEEEECC
Q 041631 255 DLY-HDSLSLLFLNTTNNHYEIWVLKE 280 (358)
Q Consensus 255 ~~~-~g~L~~~~~~~~~~~l~IW~l~~ 280 (358)
+.. +|.|.+.... ..++.+|.++.
T Consensus 298 a~~~dG~lyvad~~--~~~I~~~~~~~ 322 (329)
T 3fvz_A 298 VASEDGTVYIGDAH--TNTVWKFTLTE 322 (329)
T ss_dssp EECTTSEEEEEESS--SCCEEEEEEEE
T ss_pred EECCCCCEEEEECC--CCEEEEEeCCc
Confidence 544 6777665543 56888887764
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.06 E-value=35 Score=29.34 Aligned_cols=96 Identities=11% Similarity=0.183 Sum_probs=53.2
Q ss_pred EEEEEECCCceEEEec-CCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEee
Q 041631 226 IIISFDMANEVFQEVQ-CPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWN 302 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~ 302 (358)
.|..+|+.+.++..+. ++..... -..+... +|++.+.... +..+.||-++...+.....+... ....-+.+..
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQ--VTGVDWAPDSNRIVTCGT--DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSC--EEEEEEETTTTEEEEEET--TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred EEEEEeCCCCcEEeeeeecCCCCc--ccEEEEeCCCCEEEEEcC--CCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 6888888887543321 1111110 0133333 5666555543 57899999988776665553322 1222344445
Q ss_pred CCcEEEEecCCCCEEEEEeCCCCc
Q 041631 303 NGGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 303 ~g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
++..++.... ++.+..||+++++
T Consensus 107 ~~~~l~~~~~-d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 107 NEKKFAVGSG-SRVISICYFEQEN 129 (372)
T ss_dssp TSSEEEEEET-TSSEEEEEEETTT
T ss_pred CCCEEEEEeC-CCEEEEEEecCCC
Confidence 6655555432 5678888887766
No 65
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=75.83 E-value=67 Score=32.00 Aligned_cols=158 Identities=9% Similarity=-0.033 Sum_probs=80.9
Q ss_pred cceeeEEEEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcc
Q 041631 171 LHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIAS 247 (358)
Q Consensus 171 ~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 247 (358)
...++ ++++.+..-+.+.. .. ...+.++.+ +|.|||...... ..|..+++....-..+-. ....
T Consensus 492 ~~~I~---v~~ldG~~~~~l~~-~~-----l~~P~gIaVDp~~g~LYwtD~g~~---~~I~~~~~dG~~~~~lv~-~~l~ 558 (791)
T 3m0c_C 492 LGTVS---VADTKGVKRKTLFR-EN-----GSKPRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNGVDIYSLVT-ENIQ 558 (791)
T ss_dssp TTEEE---EEETTSSSEEEEEE-CT-----TCCEEEEEEETTTTEEEEEECSSS---CEEEEEETTSCCEEEEEC-SSCS
T ss_pred CCeEE---EEeCCCCeEEEEEe-CC-----CCCcceEEEecCCCCEEEecCCCC---CeEEEEecCCCceEEEEe-CCCC
Confidence 33556 77776544333321 01 112334554 589999875432 479999998766554421 1111
Q ss_pred cccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCC
Q 041631 248 SAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 248 ~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t 324 (358)
....|+.- +|+|+++... ...|..--++. .-.++..-....+..|+++.- ++.||.... ..+.|...|..+
T Consensus 559 --~P~GLavD~~~~~LYwaD~~--~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~~~lYwtD~-~~~~I~~~dk~t 632 (791)
T 3m0c_C 559 --WPNGITLDLLSGRLYWVDSK--LHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANRLT 632 (791)
T ss_dssp --CEEEEEEETTTTEEEEEETT--TTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEETTEEEEEET-TTTEEEEEETTT
T ss_pred --CceEEEEecCCCeEEEEeCC--CCcEEEEecCC-CceEEEecCCCccCCCCEEEEeCCEEEEEEC-CCCEEEEEeCCC
Confidence 11145544 7888887633 34444333333 222211111124556777664 455666544 267899999766
Q ss_pred CcEEEeeecCc--eeEEEEeeecce
Q 041631 325 QEMRDLGLRSF--WFSVYNFKESLI 347 (358)
Q Consensus 325 ~~~~~v~~~~~--~~~~~~y~~slv 347 (358)
++-..+-..+. ++.+.+|-+..-
T Consensus 633 G~~~~~l~~~l~~P~~i~v~h~~~Q 657 (791)
T 3m0c_C 633 GSDVNLLAENLLSPEDMVLFHNLTQ 657 (791)
T ss_dssp CCCCEEEECSCSCCCCEEEESGGGS
T ss_pred CcceEEeecCCCCceeEeeeccccC
Confidence 64443333332 255666665543
No 66
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=75.63 E-value=43 Score=29.72 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=40.0
Q ss_pred EEEEEECCCeeeEEEEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 273 YEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 273 l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
=.||+.+-.....+.+|........+.+..+|+ +++......+.|.+||.+|++..+.
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 368888887777777775433334566667777 5555432267999999999887765
No 67
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=74.94 E-value=56 Score=30.65 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=95.0
Q ss_pred ceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEe
Q 041631 102 GIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYN 181 (358)
Q Consensus 102 GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vys 181 (358)
++++.....+...|+|..|++.++|...+. ..+.++|. +.+-+. ....... ...+. +++
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~------------~~~~~spD-G~~la~-~~~~~~~----~~~i~---~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG------------FGFVSDIR-GDLIAG-LGFFGGG----RVSLF---TSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS------------CEEEEEEE-TTEEEE-EEEEETT----EEEEE---EEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC------------ceEEECCC-CCEEEE-EEEcCCC----CeEEE---EEc
Confidence 355555544455799999998777754321 23344443 233222 2222111 23355 888
Q ss_pred cCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCccccccccee------
Q 041631 182 LRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLD------ 255 (358)
Q Consensus 182 s~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~------ 255 (358)
..++.++............ ...-||...+.... .....|..+|+.+.+...+....... . .+.
T Consensus 182 ~~~g~~~~l~~~~~~~~~~-----~~SpDG~~l~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 250 (582)
T 3o4h_A 182 LSSGGLRVFDSGEGSFSSA-----SISPGMKVTAGLET--AREARLVTVDPRDGSVEDLELPSKDF--S--SYRPTAITW 250 (582)
T ss_dssp TTTCCCEEECCSSCEEEEE-----EECTTSCEEEEEEC--SSCEEEEEECTTTCCEEECCCSCSHH--H--HHCCSEEEE
T ss_pred CCCCCceEeecCCCccccc-----eECCCCCEEEEccC--CCeeEEEEEcCCCCcEEEccCCCcCh--h--hhhhccccc
Confidence 8888887665311111100 22336764432222 12357999999988777322211110 0 112
Q ss_pred --EE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecC--CCCEEEEEeCCCCcEEEe
Q 041631 256 --LY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDS--RPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 256 --~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~--~~~~l~~yd~~t~~~~~v 330 (358)
.. +|++.+.... ..+..||.+ + ...+ .+......+.+. +|.+++.... ....++.+|.++ +.+++
T Consensus 251 ~~~spdg~~~~~~~~--~g~~~l~~~-g-~~~~----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 251 LGYLPDGRLAVVARR--EGRSAVFID-G-ERVE----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEECTTSCEEEEEEE--TTEEEEEET-T-EEEC----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred eeEcCCCcEEEEEEc--CCcEEEEEE-C-Ceec----cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 23 6766655544 568999998 3 2211 111112234555 7777765431 124688888876 55444
No 68
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.91 E-value=44 Score=29.96 Aligned_cols=194 Identities=11% Similarity=0.062 Sum_probs=84.1
Q ss_pred eEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEec
Q 041631 103 IYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNL 182 (358)
Q Consensus 103 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss 182 (358)
+|.....+..+.|||..+++...+-... ++. .....+.|.|..+.+-+.+ . . .-.+. +++.
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~-----gH~--~~V~~l~f~p~~~~~l~s~-s---~-----D~~v~---iwd~ 194 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGI-----GAG--GSITGLKFNPLNTNQFYAS-S---M-----EGTTR---LQDF 194 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCC-----SSS--CCCCEEEECSSCTTEEEEE-C---S-----SSCEE---EEET
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEcc-----CCC--CCEEEEEEeCCCCCEEEEE-e---C-----CCEEE---Eeec
Confidence 4443344445699999887643322111 011 2234455666555543321 1 1 22355 7877
Q ss_pred CCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCe-
Q 041631 183 RTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDS- 260 (358)
Q Consensus 183 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~- 260 (358)
+++.-+.......... ....-...-+|.+...+... ..|..+|++++....+..-.. .-..+... +|.
T Consensus 195 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~d----g~i~~wd~~~~~~~~~~~h~~----~v~~v~~~p~~~~ 264 (435)
T 4e54_B 195 KGNILRVFASSDTINI--WFCSLDVSASSRMVVTGDNV----GNVILLNMDGKELWNLRMHKK----KVTHVALNPCCDW 264 (435)
T ss_dssp TSCEEEEEECCSSCSC--CCCCEEEETTTTEEEEECSS----SBEEEEESSSCBCCCSBCCSS----CEEEEEECTTCSS
T ss_pred cCCceeEEeccCCCCc--cEEEEEECCCCCEEEEEeCC----CcEeeeccCcceeEEEecccc----eEEeeeecCCCce
Confidence 6654333221000000 00000222345544333332 257788887654332221110 00022222 343
Q ss_pred EEEEEecCCCcEEEEEEECCCeeeEEEE--EccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 261 LSLLFLNTTNNHYEIWVLKERIWSKHLS--VTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 261 L~~~~~~~~~~~l~IW~l~~~~W~~~~~--i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
+.+.... +..+.||-+....-..... .....-..-+++..+|..++.... ++.+..||.++.+..
T Consensus 265 ~~~s~s~--d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~-D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 265 FLATASV--DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ-KSEIRVYSASQWDCP 331 (435)
T ss_dssp EEEEEET--TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES-SSCEEEEESSSSSSE
T ss_pred EEEEecC--cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC-CCEEEEEECCCCccc
Confidence 3333333 5788999876511100000 000000112233456666665432 678999998876543
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=74.70 E-value=39 Score=29.28 Aligned_cols=96 Identities=13% Similarity=0.118 Sum_probs=45.1
Q ss_pred EEEEEECCCce----EEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC---------Ceee-------
Q 041631 226 IIISFDMANEV----FQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE---------RIWS------- 284 (358)
Q Consensus 226 ~il~fD~~~e~----~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~---------~~W~------- 284 (358)
.|..+|+.+.+ ...+..|.... -..+... +|++.+.... +..+.||-+.. ..|.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLRST---ILSLDWHPNNVLLAAGCA--DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCCSC---EEEEEECTTSSEEEEEES--SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred eEEEEEECCcccceeeeEeecccCCC---eEEEEEcCCCCEEEEEeC--CCEEEEEEEEecccCCCccccccccccchhh
Confidence 47777877764 33333321110 0123333 5665555544 57899999853 2222
Q ss_pred EEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 285 KHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 285 ~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
....+....-..-+.+..++.+++.... ++.+..||+++++.
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYAGH-DSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEEET-TTEEC-CEECSTTS
T ss_pred hhhcccCCceEEEEEECCCCCEEEEEeC-CCcEEEEECCCCCC
Confidence 1222211111123444456665554331 67899999888764
No 70
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=74.54 E-value=34 Score=27.99 Aligned_cols=186 Identities=10% Similarity=0.095 Sum_probs=93.3
Q ss_pred ecceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEE
Q 041631 100 YDGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTI 179 (358)
Q Consensus 100 ~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~v 179 (358)
.+|-+.+......++++||.++....++.... ....++.+|+.. . +. +... . ...+. +
T Consensus 76 ~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g-~--l~-v~~~-~-----~~~i~---~ 133 (270)
T 1rwi_B 76 GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQG-A--VY-VADR-G-----NNRVV---K 133 (270)
T ss_dssp TTCCEEEEETTTEEEEECTTCSCCEECCCCSC---------SSEEEEEECTTC-C--EE-EEEG-G-----GTEEE---E
T ss_pred CCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---------CCCcceEECCCC-C--EE-EEEC-C-----CCEEE---E
Confidence 35666555544456889998877665543221 123566677643 2 22 2211 1 22344 6
Q ss_pred EecCCCCceecccccCeeeeecCCcceEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE
Q 041631 180 YNLRTNSWRDLVCFKTIHYCIPHSHGCTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY 257 (358)
Q Consensus 180 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~ 257 (358)
|+.++........ ..+ ..+.++.+ +|.+|+..... ..|..||..+........... .....+...
T Consensus 134 ~~~~~~~~~~~~~-~~~-----~~p~~i~~~~~g~l~v~~~~~----~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~d 200 (270)
T 1rwi_B 134 LAAGSKTQTVLPF-TGL-----NDPDGVAVDNSGNVYVTDTDN----NRVVKLEAESNNQVVLPFTDI---TAPWGIAVD 200 (270)
T ss_dssp ECTTCCSCEECCC-CSC-----CSCCCEEECTTCCEEEEEGGG----TEEEEECTTTCCEEECCCSSC---CSEEEEEEC
T ss_pred EECCCceeEeecc-ccC-----CCceeEEEeCCCCEEEEECCC----CEEEEEecCCCceEeecccCC---CCceEEEEC
Confidence 6554443322211 010 11223333 58877655433 379999998876554322111 111134444
Q ss_pred -CCeEEEEEecCCCcEEEEEEECC-CeeeEEEEEccCCccceE--EEeeCCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 258 -HDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLLGVEEPL--GVWNNGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 258 -~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~p~--~~~~~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
+|.|.+.... ...+.+|-.+. .... +....+..|. ++..+|.+++.... .+.+..|++..++.
T Consensus 201 ~~g~l~v~~~~--~~~v~~~~~~~~~~~~----~~~~~~~~p~~i~~~~~g~l~v~~~~-~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 201 EAGTVYVTEHN--TNQVVKLLAGSTTSTV----LPFTGLNTPLAVAVDSDRTVYVADRG-NDRVVKLTSLEHHH 267 (270)
T ss_dssp TTCCEEEEETT--TSCEEEECTTCSCCEE----CCCCSCSCEEEEEECTTCCEEEEEGG-GTEEEEECCCGGGS
T ss_pred CCCCEEEEECC--CCcEEEEcCCCCccee----eccCCCCCceeEEECCCCCEEEEECC-CCEEEEEcCCCccc
Confidence 5666665532 44566665443 1111 1111233444 44457888887542 57899999876553
No 71
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=73.48 E-value=44 Score=28.79 Aligned_cols=192 Identities=9% Similarity=-0.029 Sum_probs=93.5
Q ss_pred ecceEEEeec-CCeeEEEecCccce-ecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 100 YDGIYCIFGL-RDRITLWNVATRDS-RTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 100 ~~GLl~l~~~-~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
.++.+.+... .+.+.|+|+.|++. ..+|... ...++.+++. . ++..... . ...+.
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~-----------~p~~i~~~~~--g-~lyv~~~--~-----~~~v~-- 108 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT-----------SPRYIHFLSD--E-KAYVTQI--W-----DYRIF-- 108 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS-----------SEEEEEEEET--T-EEEEEEB--S-----CSEEE--
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC-----------CCcEEEEeCC--C-eEEEEEC--C-----CCeEE--
Confidence 4555544443 34569999999877 4464221 1233444433 2 3332221 1 23455
Q ss_pred EEEecCCCCcee-cccccCeeeeecCCcc-eEEeCCeEEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccccccce
Q 041631 178 TIYNLRTNSWRD-LVCFKTIHYCIPHSHG-CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETL 254 (358)
Q Consensus 178 ~vyss~~~~W~~-~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L 254 (358)
+++..++.-.. .+. ..... ....+. .+.-+|.+|....... ..|.++|+.+.+.. .++..... ..+
T Consensus 109 -~iD~~t~~~~~~i~~-g~~~~-~~~~p~~i~~~~~~lyv~~~~~~---~~v~viD~~t~~~~~~i~~g~~p-----~~i 177 (328)
T 3dsm_A 109 -IINPKTYEITGYIEC-PDMDM-ESGSTEQMVQYGKYVYVNCWSYQ---NRILKIDTETDKVVDELTIGIQP-----TSL 177 (328)
T ss_dssp -EEETTTTEEEEEEEC-TTCCT-TTCBCCCEEEETTEEEEEECTTC---CEEEEEETTTTEEEEEEECSSCB-----CCC
T ss_pred -EEECCCCeEEEEEEc-CCccc-cCCCcceEEEECCEEEEEcCCCC---CEEEEEECCCCeEEEEEEcCCCc-----cce
Confidence 78877754221 111 01000 000122 2335677875543112 47999999987653 45443211 133
Q ss_pred eEE-CCeEEEEEecCC--------CcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCC
Q 041631 255 DLY-HDSLSLLFLNTT--------NNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQ 325 (358)
Q Consensus 255 ~~~-~g~L~~~~~~~~--------~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~ 325 (358)
... +|++.+.+.... ...+.++-.+...-.+...+.......-+++..+++.++... . .++.+|++++
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~--~-~v~~~d~~t~ 254 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN--N-DIWRMPVEAD 254 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--S-SEEEEETTCS
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--c-EEEEEECCCC
Confidence 433 688777664310 134444443334433332221111122355555566555555 3 8999999988
Q ss_pred cEE
Q 041631 326 EMR 328 (358)
Q Consensus 326 ~~~ 328 (358)
++.
T Consensus 255 ~~~ 257 (328)
T 3dsm_A 255 RVP 257 (328)
T ss_dssp SCC
T ss_pred cee
Confidence 864
No 72
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=73.36 E-value=41 Score=28.42 Aligned_cols=106 Identities=10% Similarity=0.153 Sum_probs=58.9
Q ss_pred EEEEEECCC--ceE---EEec-CCCCccccccc-ceeEE-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccCCcc
Q 041631 226 IIISFDMAN--EVF---QEVQ-CPDIASSAYME-TLDLY-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLLGVE 295 (358)
Q Consensus 226 ~il~fD~~~--e~~---~~i~-~P~~~~~~~~~-~L~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~ 295 (358)
.|..+|+.. .++ ..+. +|......... .+... +|+..++... ....+.+|.++. +.+.....+......
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~~~~~~~~~~~~~~~ 279 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGSVLSKEGFQPTETQP 279 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSCCEEEEEEEECSSSC
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCCceEEeeeecCCCcc
Confidence 688888843 333 2232 34331111111 23333 5654443332 367999999985 567666666543223
Q ss_pred ceEEEeeCCcEEEEecCCCCEEEEE--eCCCCcEEEeee
Q 041631 296 EPLGVWNNGGFFVQSDSRPRRLLLY--DPNTQEMRDLGL 332 (358)
Q Consensus 296 ~p~~~~~~g~i~~~~~~~~~~l~~y--d~~t~~~~~v~~ 332 (358)
.-+.+..+|+.++.....++.+..| |.++++++.+..
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 3466666777555543225677777 777888887753
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.61 E-value=45 Score=28.62 Aligned_cols=65 Identities=9% Similarity=0.136 Sum_probs=42.1
Q ss_pred CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeC--CcEEEEecCCCCEEEEEeCCCCc
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNN--GGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~--g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
|.+.+.... +..+.||-++.+.|.....+... .-..-+.+..+ +.+++.... ++.+..||++++.
T Consensus 69 ~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-DGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-TSEEEEEECCTTS
T ss_pred CCEEEEecc--CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-CCcEEEEecCCCC
Confidence 566555544 57899999998888777766533 22223444444 655555432 6789999998773
No 74
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=71.84 E-value=56 Score=29.28 Aligned_cols=185 Identities=11% Similarity=0.079 Sum_probs=88.1
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceecc
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDLV 191 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~~ 191 (358)
.+.++|..++..+.|.... .....+.+.|..+ + ++..... . ....+. +++..++..+...
T Consensus 160 ~i~i~d~~g~~~~~l~~~~----------~~v~~~~~Spdg~-~-la~~s~~-~----~~~~i~---~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 160 ELRVSDYDGYNQFVVHRSP----------QPLMSPAWSPDGS-K-LAYVTFE-S----GRSALV---IQTLANGAVRQVA 219 (415)
T ss_dssp EEEEEETTSCSCEEEEEES----------SCEEEEEECTTSS-E-EEEEECT-T----SSCEEE---EEETTTCCEEEEE
T ss_pred eEEEEcCCCCCCEEEeCCC----------CcceeeEEcCCCC-E-EEEEEec-C----CCcEEE---EEECCCCcEEEee
Confidence 4599998776655554221 1233455566432 2 3322211 1 134556 8898887665443
Q ss_pred cccCeeeeecCCcceEEeCCe-EEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCC
Q 041631 192 CFKTIHYCIPHSHGCTYLDGL-CHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTT 269 (358)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~ 269 (358)
......... ...-||. +.+.....+ ...|..+|+.+.+...+...... ...+.-. +|+..++....
T Consensus 220 ~~~~~~~~~-----~~spdg~~la~~~~~~g--~~~i~~~d~~~~~~~~l~~~~~~----~~~~~~spdg~~l~~~s~~- 287 (415)
T 2hqs_A 220 SFPRHNGAP-----AFSPDGSKLAFALSKTG--SLNLYVMDLASGQIRQVTDGRSN----NTEPTWFPDSQNLAFTSDQ- 287 (415)
T ss_dssp CCSSCEEEE-----EECTTSSEEEEEECTTS--SCEEEEEETTTCCEEECCCCSSC----EEEEEECTTSSEEEEEECT-
T ss_pred cCCCcccCE-----EEcCCCCEEEEEEecCC--CceEEEEECCCCCEEeCcCCCCc----ccceEECCCCCEEEEEECC-
Confidence 211111100 1222565 444443221 24689999988877654321111 0022223 66644444331
Q ss_pred CcEEEEEEECC--CeeeEEEEEccC-CccceEEEeeCCcEEEEecC--CCCEEEEEeCCCCcEEEee
Q 041631 270 NNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDS--RPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 270 ~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~--~~~~l~~yd~~t~~~~~v~ 331 (358)
.....||.++- +. ...+... ....-+.+..+|+.++.... ....++.||+++++.+.+.
T Consensus 288 ~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 288 AGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp TSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 23445665543 32 1122111 11112344456665444331 1247999999999887654
No 75
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=71.78 E-value=16 Score=31.17 Aligned_cols=110 Identities=5% Similarity=-0.031 Sum_probs=58.8
Q ss_pred CCe-EEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGL-CHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|. +||.....+ .|..+|.. .+.+.+..|.... ..+... +|+|.+.... ...+.+|-.+ +......
T Consensus 55 ~g~~l~~~d~~~~----~i~~~~~~-g~~~~~~~~~~~~----~gl~~d~dG~l~v~~~~--~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 55 AQRTLVWSDLVGR----RVLGWRED-GTVDVLLDATAFT----NGNAVDAQQRLVHCEHG--RRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp GGTEEEEEETTTT----EEEEEETT-SCEEEEEESCSCE----EEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEE
T ss_pred CCCEEEEEECCCC----EEEEEeCC-CCEEEEeCCCCcc----ceeeECCCCCEEEEECC--CCEEEEECCC-CCEEEEE
Confidence 454 888765443 78899985 4455554443211 123333 6776654422 3455555443 3332221
Q ss_pred E-EccCCcc--ceEEEeeCCcEEEEec----------------CCCCEEEEEeCCCCcEEEee
Q 041631 288 S-VTLLGVE--EPLGVWNNGGFFVQSD----------------SRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 288 ~-i~~~~~~--~p~~~~~~g~i~~~~~----------------~~~~~l~~yd~~t~~~~~v~ 331 (358)
. ....... .-+.+..+|.+++... .....|+.||+++++++.+.
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 1 1111111 2355566888888421 00257999999888887764
No 76
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=71.75 E-value=80 Score=31.05 Aligned_cols=140 Identities=6% Similarity=-0.001 Sum_probs=71.3
Q ss_pred EEecCCCCceecccccCeeeeecCCcceEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeE
Q 041631 179 IYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDL 256 (358)
Q Consensus 179 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~ 256 (358)
.|+..++.|+.......... ....-.++.. +|.+ |++..+. .+..||..++++..+..+.......-..+.+
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~d~~g~l-Wigt~~~----Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 546 (781)
T 3v9f_A 473 VIDLASKKVIHHYDTSNSQL-LENFVRSIAQDSEGRF-WIGTFGG----GVGIYTPDMQLVRKFNQYEGFCSNTINQIYR 546 (781)
T ss_dssp EEESSSSSCCEEECTTTSSC-SCSCEEEEEECTTCCE-EEEESSS----CEEEECTTCCEEEEECTTTTCSCSCEEEEEE
T ss_pred EEeCCCCeEEecccCccccc-ccceeEEEEEcCCCCE-EEEEcCC----CEEEEeCCCCeEEEccCCCCCCCCeeEEEEE
Confidence 78888887765542110000 0011113333 4555 5665432 5899999999998876543321111113333
Q ss_pred E-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccCC--ccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 257 Y-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLLG--VEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 257 ~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~--~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
- +|.|-+.+. ..+ |..++. ..+.....-+..+ ...-+...++|.|.+.+. ..+..||+++++++.+.
T Consensus 547 d~~g~lWi~T~----~Gl-v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~---~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 547 SSKGQMWLATG----EGL-VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN---TGISCYITSKKCFYTYD 618 (781)
T ss_dssp CTTSCEEEEET----TEE-EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS---SCEEEEETTTTEEEEEC
T ss_pred CCCCCEEEEEC----CCc-eEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC---CceEEEECCCCceEEec
Confidence 3 566655442 122 133332 3332211111111 112233345788988875 56999999999988764
Q ss_pred e
Q 041631 332 L 332 (358)
Q Consensus 332 ~ 332 (358)
.
T Consensus 619 ~ 619 (781)
T 3v9f_A 619 H 619 (781)
T ss_dssp G
T ss_pred c
Confidence 3
No 77
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.62 E-value=44 Score=27.97 Aligned_cols=103 Identities=6% Similarity=-0.032 Sum_probs=54.1
Q ss_pred CCeEEEEEeecCCCceEEEEEECC-CceE----EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCee
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMA-NEVF----QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIW 283 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~-~e~~----~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W 283 (358)
+|.++ .+.... ..|..||+. +.++ ..+.. .......+... +|+|.+.. ...+.+|-.+ +.-
T Consensus 182 dg~~l-v~~~~~---~~i~~~~~~~~g~~~~~~~~~~~----~~~~p~~i~~d~~G~l~v~~----~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 182 SGNLL-VSDTGD---NATHRYCLNARGETEYQGVHFTV----EPGKTDGLRVDAGGLIWASA----GDGVHVLTPD-GDE 248 (296)
T ss_dssp TSCEE-EEETTT---TEEEEEEECSSSCEEEEEEEECC----SSSCCCSEEEBTTSCEEEEE----TTEEEEECTT-SCE
T ss_pred CCCEE-EEeCCC---CeEEEEEECCCCcCcCCCeEeeC----CCCCCCeEEECCCCCEEEEc----CCeEEEECCC-CCE
Confidence 67766 433322 378999986 4444 22211 11111145544 78877655 3466666544 332
Q ss_pred eEEEEEccCCccceEEEe-eCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 284 SKHLSVTLLGVEEPLGVW-NNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 284 ~~~~~i~~~~~~~p~~~~-~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
....... .. ...+.+. .++..++... .+.++.++++++++++
T Consensus 249 ~~~~~~~-~~-~~~~~f~~~d~~~L~v~t--~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 249 LGRVLTP-QT-TSNLCFGGPEGRTLYMTV--STEFWSIETNVRGLEH 291 (296)
T ss_dssp EEEEECS-SC-CCEEEEESTTSCEEEEEE--TTEEEEEECSCCBCCC
T ss_pred EEEEECC-CC-ceeEEEECCCCCEEEEEc--CCeEEEEEcccccccc
Confidence 2222221 12 2234443 4555444444 4799999999998875
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=71.60 E-value=80 Score=30.96 Aligned_cols=65 Identities=6% Similarity=0.107 Sum_probs=40.4
Q ss_pred CeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEEeeC---CcEEEEecCCCCEEEEEeCCCCc
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWNN---GGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~~---g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
|.+.+.... +..+.||-+.. ..+.....+... .-..-+.+..+ +.+++..+. ++.+..||+++++
T Consensus 170 ~~~l~sgs~--dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~-Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 170 SRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNEQ 240 (753)
T ss_dssp GCCEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES-SSCEEEEEESSSS
T ss_pred CCEEEEEEC--CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec-CCEEEEecCCCCC
Confidence 555555544 57899999987 566666665432 11223444455 666665442 6789999988763
No 79
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=71.02 E-value=45 Score=28.49 Aligned_cols=116 Identities=15% Similarity=0.121 Sum_probs=63.4
Q ss_pred eEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcc----------------cccccceeEE--CCeEEEEE
Q 041631 206 CTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIAS----------------SAYMETLDLY--HDSLSLLF 265 (358)
Q Consensus 206 ~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~----------------~~~~~~L~~~--~g~L~~~~ 265 (358)
++.+ +|.++|..... ..|..||..+.++..+..+.... ......+... +|+|.+..
T Consensus 23 ~i~~d~~g~~l~v~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 23 SFTFDSTNKGFYTSVQD----GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CEECCTTCSSEEEECTT----SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEcCC----CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 4444 57877776543 37999999988777664432110 0011134444 57777765
Q ss_pred ecCCCcEEEEEEECC--CeeeEEEEE-ccCCccce--EEEee-CCcEEEEecC----------------CCCEEEEEeCC
Q 041631 266 LNTTNNHYEIWVLKE--RIWSKHLSV-TLLGVEEP--LGVWN-NGGFFVQSDS----------------RPRRLLLYDPN 323 (358)
Q Consensus 266 ~~~~~~~l~IW~l~~--~~W~~~~~i-~~~~~~~p--~~~~~-~g~i~~~~~~----------------~~~~l~~yd~~ 323 (358)
.. .. |++++. +........ ...++..| +.+.. +|.|++.... ..+.++.||++
T Consensus 99 ~~---~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 99 CY---YH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp TT---TE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred CC---CC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 32 22 455543 222221111 11122234 55556 7889987541 02579999999
Q ss_pred CCcEEEe
Q 041631 324 TQEMRDL 330 (358)
Q Consensus 324 t~~~~~v 330 (358)
+++++.+
T Consensus 174 ~~~~~~~ 180 (322)
T 2fp8_A 174 TKETTLL 180 (322)
T ss_dssp TTEEEEE
T ss_pred CCEEEEe
Confidence 8887665
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=70.75 E-value=48 Score=28.04 Aligned_cols=115 Identities=11% Similarity=0.034 Sum_probs=62.9
Q ss_pred EeCCeEEEEEeecCCCceEEEEEECCCce----EEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCe
Q 041631 208 YLDGLCHWLWELEDSKHKIIISFDMANEV----FQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERI 282 (358)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~ 282 (358)
.-+|...|.+.... ..|..+|+.+.+ ...++..... ..+... +|+..++... ....+.+|-++.+.
T Consensus 184 spdg~~l~v~~~~~---~~v~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~spdg~~l~v~~~-~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 184 TPDGNFAFVANLIG---NSIGILETQNPENITLLNAVGTNNLP-----GTIVVSRDGSTVYVLTE-STVDVFNFNQLSGT 254 (331)
T ss_dssp CTTSSEEEEEETTT---TEEEEEECSSTTSCEEEEEEECSSCC-----CCEEECTTSSEEEEECS-SEEEEEEEETTTTE
T ss_pred CCCCCEEEEEeCCC---CeEEEEECCCCcccceeeeccCCCCC-----ceEEECCCCCEEEEEEc-CCCEEEEEECCCCc
Confidence 34676333433222 378999998765 3334332111 134444 6774444432 34567777777655
Q ss_pred eeEEEEEccC----C--c--cceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 283 WSKHLSVTLL----G--V--EEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 283 W~~~~~i~~~----~--~--~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
......+... + . ...+.+..+|+.++......+.+.+||++++....+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 255 LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVA 311 (331)
T ss_dssp EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECT
T ss_pred eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccccee
Confidence 5444443311 1 1 1235667777655544322568999999998877763
No 81
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=68.48 E-value=45 Score=27.95 Aligned_cols=113 Identities=6% Similarity=0.024 Sum_probs=59.6
Q ss_pred eCCeEEEE-------EeecCCCceEEEEEECCCceEEEecCCCCccc-ccccceeEE-C-CeEEEEEecCCCcEEEEEEE
Q 041631 209 LDGLCHWL-------WELEDSKHKIIISFDMANEVFQEVQCPDIASS-AYMETLDLY-H-DSLSLLFLNTTNNHYEIWVL 278 (358)
Q Consensus 209 ~~G~lywl-------~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~-~~~~~L~~~-~-g~L~~~~~~~~~~~l~IW~l 278 (358)
-+|.+|+. .... ..|..+|+.+.++..+..|..... .....+... + |+|.+.... ..+.+|-.
T Consensus 27 ~~g~l~~~~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~---~~l~~~d~ 99 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPA----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---LGLLVVQT 99 (314)
T ss_dssp TTSCEEEEETTCEETTEEC----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---TEEEEEET
T ss_pred CCCCEEEEEeccccCCCCC----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---CCEEEEeC
Confidence 36888877 2222 379999998888877655321101 011134443 5 777766532 34555544
Q ss_pred CCCeeeEE-EEEcc-CCcc--ceEEEeeCCcEEEEecCC--------------CCEEEEEeCCCCcEEEe
Q 041631 279 KERIWSKH-LSVTL-LGVE--EPLGVWNNGGFFVQSDSR--------------PRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 279 ~~~~W~~~-~~i~~-~~~~--~p~~~~~~g~i~~~~~~~--------------~~~l~~yd~~t~~~~~v 330 (358)
+ +..... ..... .+.. .-+.+..+|.+++..... ...++.||++ ++++.+
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 4 332211 11000 1112 234555678888876521 1479999987 666554
No 82
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=67.81 E-value=67 Score=28.58 Aligned_cols=209 Identities=10% Similarity=0.022 Sum_probs=100.7
Q ss_pred eecceEEEeecCC-eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGLRD-RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~~~-~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
..+|.|.+.+... +++..++.++....+-..... ...++.+|+..+..-+. . . ....++
T Consensus 125 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~lY~~----d-~----~~~~I~-- 184 (386)
T 3v65_B 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWT----D-S----GTSRIE-- 184 (386)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS---------CCCCEEEETTTTEEEEE----E-T----TTTEEE--
T ss_pred cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCeEEEE----c-C----CCCeEE--
Confidence 3456666665433 447777776654443222211 12356667654432211 1 1 133455
Q ss_pred EEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccce
Q 041631 178 TIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETL 254 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L 254 (358)
+++..+..-+.... ..+ ..+.++.+ +|.|||..... ...|..+|+....-..+-. ..... ...|
T Consensus 185 -~~~~dg~~~~~l~~-~~l-----~~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~~-~~~~~--PnGl 251 (386)
T 3v65_B 185 -VANLDGAHRKVLLW-QSL-----EKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRIIAD-THLFW--PNGL 251 (386)
T ss_dssp -ECBTTSCSCEEEEC-SSC-----SCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEEC-SSCSC--EEEE
T ss_pred -EEeCCCCceEEeec-CCC-----CCCcEEEEEcCCCeEEEeccCC---CCEEEEEeCCCCCcEEEEE-CCCCC--eeeE
Confidence 67665443222211 111 12234433 58999986543 1479999988764443321 11111 1135
Q ss_pred eEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEe-eCCcEEEEecCCCCEEEEEeC-CCCcEEEe
Q 041631 255 DLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVW-NNGGFFVQSDSRPRRLLLYDP-NTQEMRDL 330 (358)
Q Consensus 255 ~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~-~~g~i~~~~~~~~~~l~~yd~-~t~~~~~v 330 (358)
+.. +++|+++... ...+...-++.. - ...+-...+..|.++. .++.++..... .+.+..+|. ..+..+.+
T Consensus 252 avd~~~~~lY~aD~~--~~~I~~~d~dG~-~--~~~~~~~~~~~P~giav~~~~ly~td~~-~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 252 TIDYAGRRMYWVDAK--HHVIERANLDGS-H--RKAVISQGLPHPFAITVFEDSLYWTDWH-TKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEGGGTEEEEEETT--TTEEEEECTTSC-S--CEEEECSSCSSEEEEEEETTEEEEEETT-TTEEEEEETTTCCSCEEE
T ss_pred EEeCCCCEEEEEECC--CCEEEEEeCCCC-e--eEEEEECCCCCceEEEEECCEEEEeeCC-CCeEEEEECCCCcceEEE
Confidence 543 6788776643 344443333331 1 1112112345565554 45666666542 678999994 44455555
Q ss_pred eecCc-eeEEEEeeecc
Q 041631 331 GLRSF-WFSVYNFKESL 346 (358)
Q Consensus 331 ~~~~~-~~~~~~y~~sl 346 (358)
..... +..+..|-+..
T Consensus 326 ~~~~~~p~gi~v~~~~~ 342 (386)
T 3v65_B 326 RNKLHFPMDIHTLHPQR 342 (386)
T ss_dssp ECSCSCCCCEEEESGGG
T ss_pred ccCCCCCceEEEEchhc
Confidence 43211 24455565544
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=67.49 E-value=69 Score=28.64 Aligned_cols=56 Identities=7% Similarity=0.038 Sum_probs=30.5
Q ss_pred CcEEEEEEECCCeeeEEEEEc-cC--CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 270 NNHYEIWVLKERIWSKHLSVT-LL--GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 270 ~~~l~IW~l~~~~W~~~~~i~-~~--~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
...+.||-...+. ....+. .. .+.....+..+|.++.... ++.+.+||+++++.++
T Consensus 377 ~~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~--d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAM--GYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEEC--SSEEEECCCC------
T ss_pred CCEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEc--CCcEEEEECCcCeeeC
Confidence 3568888766532 222222 11 2333334566888877766 7799999999887654
No 84
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=66.80 E-value=48 Score=27.86 Aligned_cols=112 Identities=11% Similarity=0.125 Sum_probs=58.0
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccc--cccceeEE-CCeEEEEEecCCCcEEEEEEECC-C
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSA--YMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-R 281 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~--~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~ 281 (358)
.+..||.++....... ..|+.||...+....+.+....... ....+... +|.+.+.... ...+..|-.+. .
T Consensus 83 ~~~~dG~~lv~~~~~~---~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~--~~~v~~~d~~G~~ 157 (276)
T 3no2_A 83 RILPDGNALVAWCGHP---STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA--TSEVREIAPNGQL 157 (276)
T ss_dssp EECTTSCEEEEEESTT---EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT--TTEEEEECTTSCE
T ss_pred EECCCCCEEEEecCCC---CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC--CCEEEEECCCCCE
Confidence 4556787765443312 4789999877655555543321111 11122222 5665554432 45666666553 3
Q ss_pred eeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 282 IWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 282 ~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
.|.... ...+.. .....+|.+++.... .++++.+|++|+++
T Consensus 158 ~w~~~~--~~~~~~--~~~~~~g~~~v~~~~-~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 158 LNSVKL--SGTPFS--SAFLDNGDCLVACGD-AHCFVQLNLESNRI 198 (276)
T ss_dssp EEEEEC--SSCCCE--EEECTTSCEEEECBT-TSEEEEECTTTCCE
T ss_pred EEEEEC--CCCccc--eeEcCCCCEEEEeCC-CCeEEEEeCcCCcE
Confidence 444322 111111 222356777776542 45899999996554
No 85
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=66.02 E-value=60 Score=27.39 Aligned_cols=180 Identities=9% Similarity=-0.022 Sum_probs=88.0
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCc-eec
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSW-RDL 190 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W-~~~ 190 (358)
.+.++|+.|++....-..+. ... ++.++|..+ +-++ .. . . ...+. +++..++.- ...
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~---------~~~-~~~~s~dg~-~l~~-~~-~-~-----~~~i~---~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGY---------DFV-DTAITSDCS-NVVV-TS-D-F-----CQTLV---QIETQLEPPKVVA 78 (331)
T ss_dssp EEEEEETTTCCEEEEEECCC---------CEE-EEEECSSSC-EEEE-EE-S-T-----TCEEE---EEECSSSSCEEEE
T ss_pred eEEEEeCcccceeeeEEccC---------Ccc-eEEEcCCCC-EEEE-Ee-C-C-----CCeEE---EEECCCCceeEEe
Confidence 45999999987754322221 112 566666543 3222 21 1 1 22455 888877654 111
Q ss_pred ccccCeeeeecCCc-ceEEeCCe-EEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccccccceeEE-CCe-EEEEE
Q 041631 191 VCFKTIHYCIPHSH-GCTYLDGL-CHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETLDLY-HDS-LSLLF 265 (358)
Q Consensus 191 ~~~~~~~~~~~~~~-~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~-~g~-L~~~~ 265 (358)
......+ .. -.+.-+|. +| ..... .....|..+|+.+.+.. .++..... ..+... +|+ |.+..
T Consensus 79 ~~~~~~~-----~~~~~~s~dg~~l~-~~~~~-~~~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 79 IQEGQSS-----MADVDITPDDQFAV-TVTGL-NHPFNMQSYSFLKNKFISTIPIPYDA-----VGIAISPNGNGLILID 146 (331)
T ss_dssp EEECSSC-----CCCEEECTTSSEEE-ECCCS-SSSCEEEEEETTTTEEEEEEECCTTE-----EEEEECTTSSCEEEEE
T ss_pred cccCCCC-----ccceEECCCCCEEE-EecCC-CCcccEEEEECCCCCeEEEEECCCCc-----cceEECCCCCEEEEEe
Confidence 1000001 11 02333565 44 32222 11227999999887653 33332211 134433 665 44443
Q ss_pred ecCCCcEEEEEEECC-CeeeEE--EEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcE
Q 041631 266 LNTTNNHYEIWVLKE-RIWSKH--LSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 266 ~~~~~~~l~IW~l~~-~~W~~~--~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
.. ....+.+|.++. +.-... ..+.......-+.+..+|+ +++... ..+.+..||+++++.
T Consensus 147 ~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 147 RS-SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL-IGNSIGILETQNPEN 210 (331)
T ss_dssp ET-TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET-TTTEEEEEECSSTTS
T ss_pred cC-CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC-CCCeEEEEECCCCcc
Confidence 33 233399999987 322211 1121111223345556776 555443 267899999998885
No 86
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=65.99 E-value=65 Score=27.76 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=38.0
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeC
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDP 322 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~ 322 (358)
+|.+.+.... +..+.||.++...|.....+... ....-+.+..+|..++.... ++.+..||.
T Consensus 161 ~~~~l~s~s~--d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~-D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASY--DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD-DRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEEE
T ss_pred CCCEEEEEeC--CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC-CCeEEEecc
Confidence 5555554443 57899999988888776666532 22223455556666655432 567777774
No 87
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=65.44 E-value=66 Score=27.69 Aligned_cols=65 Identities=5% Similarity=0.055 Sum_probs=38.7
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCC
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQ 325 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~ 325 (358)
+|++.+.... +..+.||.+....+.....+... .-..-+.+..++.+++.... ++.+..||++++
T Consensus 72 ~g~~l~s~s~--D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~-D~~v~iwd~~~~ 137 (345)
T 3fm0_A 72 CGNYLASASF--DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEVDEE 137 (345)
T ss_dssp TSSEEEEEET--TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEEECTT
T ss_pred CCCEEEEEEC--CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC-CCeEEEEECCCC
Confidence 5665555543 57899999887666555555432 11223444456666665432 667888888765
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=65.25 E-value=64 Score=27.42 Aligned_cols=71 Identities=7% Similarity=0.081 Sum_probs=42.4
Q ss_pred CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeee
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~ 332 (358)
|.+.+.... +..+.||-++.........+... .-..-+.+..++..++.... ++.+..||+++++...+..
T Consensus 54 g~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 54 GNFLIAGSW--ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-DKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp SEEEEEEET--TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECC--CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-CCcEEEEEcCCCCceeecc
Confidence 466555544 57899999986233332333221 11223444556766655432 6789999999998777544
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=64.98 E-value=78 Score=28.34 Aligned_cols=94 Identities=11% Similarity=0.139 Sum_probs=56.0
Q ss_pred EEEEEECCCceEE-EecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCC
Q 041631 226 IIISFDMANEVFQ-EVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNG 304 (358)
Q Consensus 226 ~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g 304 (358)
.|..+|+.+.+.. .+...... ......++...+.... +..+.||-+.+.. +............+.+..++
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~l~s~s~--dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHTAL-----VGLLRLSDKFLVSAAA--DGSIRGWDANDYS--RKFSYHHTNLSAITTFYVSD 403 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSC-----EEEEEECSSEEEEEET--TSEEEEEETTTCC--EEEEEECTTCCCEEEEEECS
T ss_pred cEEEEECCCCcEEEEEeCCCCc-----EEEEEEcCCEEEEEeC--CCcEEEEECCCCc--eeeeecCCCCccEEEEEeCC
Confidence 5777888766542 33221111 1122234554444443 5789999988722 22222222334456666788
Q ss_pred cEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 305 GFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 305 ~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
.+++... ++.+..||+++++....
T Consensus 404 ~~l~~~~--dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 404 NILVSGS--ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp SEEEEEE--TTEEEEEETTTCCEEES
T ss_pred CEEEEec--CCeEEEEECCCCcEEeh
Confidence 8888877 78999999999887764
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=64.46 E-value=66 Score=27.57 Aligned_cols=94 Identities=11% Similarity=0.036 Sum_probs=52.6
Q ss_pred EEEEEECCCceEEEec-CCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEcc--CCccceEEEe
Q 041631 226 IIISFDMANEVFQEVQ-CPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTL--LGVEEPLGVW 301 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~--~~~~~p~~~~ 301 (358)
.|..+|+++.+...+. ...... -..+... +|.+.+.... +..+.||-+....-. ...+.. ..-..-+.+.
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~---i~~~~~~pdg~~lasg~~--dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVE---YSSGVLHKDSLLLALYSP--DGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCC---CCEEEECTTSCEEEEECT--TSCEEEEESSCTTSC-CEECCCCTTSCEEEEEEC
T ss_pred cEEEEECCCCcEEEEEecCCCCc---eEEEEECCCCCEEEEEcC--CCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEe
Confidence 5888898887664332 221111 0123333 6666655543 679999998872211 012222 1112234455
Q ss_pred eCCcEEEEecCCCCEEEEEeCCCCcE
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
.+|..++... ++.+..||+++.+.
T Consensus 224 ~~g~~l~s~~--~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 224 DNGYWMVVEC--DQTVVCFDLRKDVG 247 (343)
T ss_dssp TTSSEEEEEE--SSBEEEEETTSSTT
T ss_pred CCCCEEEEEe--CCeEEEEEcCCCCc
Confidence 6777777766 55899999887653
No 91
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=62.68 E-value=65 Score=26.61 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=58.6
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCc-EEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNN-HYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~-~l~IW~l~~~~W~~~~ 287 (358)
+|.+|...... ..|..||...+....+..+.... ....+... +|.|.+.... .. .+.+|-.+ +.-....
T Consensus 174 ~g~l~v~~~~~----~~i~~~~~~g~~~~~~~~~g~~~--~p~~i~~d~~G~l~v~~~~--~~~~i~~~~~~-g~~~~~~ 244 (286)
T 1q7f_A 174 KQEIFISDNRA----HCVKVFNYEGQYLRQIGGEGITN--YPIGVGINSNGEILIADNH--NNFNLTIFTQD-GQLISAL 244 (286)
T ss_dssp SSEEEEEEGGG----TEEEEEETTCCEEEEESCTTTSC--SEEEEEECTTCCEEEEECS--SSCEEEEECTT-SCEEEEE
T ss_pred CCCEEEEECCC----CEEEEEcCCCCEEEEEccCCccC--CCcEEEECCCCCEEEEeCC--CCEEEEEECCC-CCEEEEE
Confidence 47877544333 37999999887766665432111 11134444 6787776543 33 78888643 2222222
Q ss_pred EEccCCccce--EEEeeCCcEEEEecCCCCEEEEEeCCC
Q 041631 288 SVTLLGVEEP--LGVWNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 288 ~i~~~~~~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
... .....| +++..+|.+++... ++.+..|+...
T Consensus 245 ~~~-~~~~~~~~i~~~~~g~l~vs~~--~~~v~v~~~~~ 280 (286)
T 1q7f_A 245 ESK-VKHAQCFDVALMDDGSVVLASK--DYRLYIYRYVQ 280 (286)
T ss_dssp EES-SCCSCEEEEEEETTTEEEEEET--TTEEEEEECSC
T ss_pred ccc-CCCCcceeEEECCCCcEEEECC--CCeEEEEEccc
Confidence 211 122223 55566888888865 77899998754
No 92
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=61.56 E-value=84 Score=30.70 Aligned_cols=110 Identities=8% Similarity=-0.043 Sum_probs=55.5
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.|||...... ..|.++|+.......+.. .... ....|+.. +++|++.... ...|.+.-++.. - ..
T Consensus 507 ~g~ly~td~~~~---~~I~~~~~dG~~~~~l~~-~~l~--~PnGlavd~~~~~LY~aD~~--~~~I~~~d~dG~-~--~~ 575 (699)
T 1n7d_A 507 HGFMYWTDWGTP---AKIKKGGLNGVDIYSLVT-ENIQ--WPNGITLDLLSGRLYWVDSK--LHSISSIDVNGG-N--RK 575 (699)
T ss_dssp SSCCEECCCSSS---CCEEBCCSSSCCCCEESC-SSCS--SCCCEEECTTTCCEEEEETT--TTEEEEECSSSS-C--CE
T ss_pred CCcEEEcccCCC---CeEEEEeCCCCCeeEEEe-CCCC--CccEEEEeccCCEEEEEecC--CCeEEEEccCCC-c--eE
Confidence 589999764321 368888876544333211 1111 11134443 5777776533 344444444331 1 11
Q ss_pred EE-cc-CCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 288 SV-TL-LGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 288 ~i-~~-~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
.+ .. ..+..|.++.- ++.||+... ..+.|..+|..+++..++-
T Consensus 576 ~~~~~~~~~~~P~glavd~~~lywtd~-~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 576 TILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EECCCSSSCSSCCCCEEETTEEEEECS-TTTCEEEEETTTEEEEECC
T ss_pred EEEecCCcCCCceEeEEECCEEEEEeC-CCCeEEEEEccCCCceEEe
Confidence 12 11 13445655543 345555543 2678999998877765543
No 93
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=61.23 E-value=91 Score=27.83 Aligned_cols=188 Identities=11% Similarity=0.080 Sum_probs=92.3
Q ss_pred eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceecc
Q 041631 112 RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDLV 191 (358)
Q Consensus 112 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~~ 191 (358)
.++++|..|++.+.+...+ .....+.+.|.. .+ ++..... + ....+. +++..++..+...
T Consensus 204 ~i~~~d~~tg~~~~l~~~~----------~~~~~~~~spdg-~~-la~~~~~--~---g~~~i~---~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFP----------RHNGAPAFSPDG-SK-LAFALSK--T---GSLNLY---VMDLASGQIRQVT 263 (415)
T ss_dssp EEEEEETTTCCEEEEECCS----------SCEEEEEECTTS-SE-EEEEECT--T---SSCEEE---EEETTTCCEEECC
T ss_pred EEEEEECCCCcEEEeecCC----------CcccCEEEcCCC-CE-EEEEEec--C---CCceEE---EEECCCCCEEeCc
Confidence 4599999999877654322 123345556643 32 2222111 1 133445 7788777655443
Q ss_pred cccCeeeeecCCcceEEeCCe-EEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEe-cC
Q 041631 192 CFKTIHYCIPHSHGCTYLDGL-CHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFL-NT 268 (358)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~-~~ 268 (358)
......... ...-||. +++..... ....|..+|+.+.+...+...... ...+... +|+..++.. ..
T Consensus 264 ~~~~~~~~~-----~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~~~~----~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 264 DGRSNNTEP-----TWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWEGSQ----NQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp CCSSCEEEE-----EECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCSSSE----EEEEEECTTSSEEEEEEECS
T ss_pred CCCCcccce-----EECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecCCCc----ccCeEECCCCCEEEEEECcC
Confidence 211111100 1122565 44433222 124688889988765544322111 0022222 666544443 32
Q ss_pred CCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCC--EEEEEeCCCCcEEEeeec
Q 041631 269 TNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPR--RLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 269 ~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~--~l~~yd~~t~~~~~v~~~ 333 (358)
+...+.+|-++.+... .+........+.+..+|+.++......+ .|+.+|++++..+.+...
T Consensus 333 g~~~i~~~d~~~~~~~---~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQ---VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp SCEEEEEEETTTCCEE---ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCS
T ss_pred CceEEEEEECCCCCEE---EecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCC
Confidence 3456777777654332 2221122223444567764444321122 799999999888887543
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=60.85 E-value=90 Score=27.66 Aligned_cols=89 Identities=16% Similarity=0.235 Sum_probs=50.7
Q ss_pred EEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCCcEEEEecCCC
Q 041631 237 FQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRP 314 (358)
Q Consensus 237 ~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~ 314 (358)
++.+..|.-..+.+...|.-. ++.|++ .. +.++.||-.+.+.-.+...+... ....-+++..+|..++.... +
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAv-gl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~-D 168 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAV-AL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-S 168 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEE-EE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-T
T ss_pred ceEEECCCCcccccceeEEECCCCEEEE-Ee---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-C
Confidence 344566665544332122222 444433 32 47999998877655554443322 22234555667777666442 6
Q ss_pred CEEEEEeCCCCcEEEe
Q 041631 315 RRLLLYDPNTQEMRDL 330 (358)
Q Consensus 315 ~~l~~yd~~t~~~~~v 330 (358)
+.+..||+++++....
T Consensus 169 g~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRN 184 (420)
T ss_dssp SCEEEEETTTTEEEEE
T ss_pred CeEEEEEcCCCcEEEE
Confidence 7899999998876554
No 95
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=60.48 E-value=85 Score=27.27 Aligned_cols=190 Identities=9% Similarity=0.035 Sum_probs=89.5
Q ss_pred eeeecceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 97 GGPYDGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 97 ~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
....+|.|.+......++.+|+.|++.+.--..... . ..... + + ++ +|+. ... .-.+.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~----~-~~~p~--~--~---~~-~v~v-~~~-------~g~l~- 156 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE----A-LSRPV--V--S---DG-LVLI-HTS-------NGQLQ- 156 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC----C-CSCCE--E--E---TT-EEEE-ECT-------TSEEE-
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc----e-EcCCE--E--E---CC-EEEE-EcC-------CCeEE-
Confidence 445678887776665679999999875421111100 0 00011 1 1 12 2222 110 22344
Q ss_pred EEEEecCCC--CceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEE-ecC--CCCcccc--
Q 041631 177 CTIYNLRTN--SWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQE-VQC--PDIASSA-- 249 (358)
Q Consensus 177 ~~vyss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~--P~~~~~~-- 249 (358)
.|+..++ .|+.....+.... .....++..+|.+|.-.. . ..+.++|..+.+..+ .+. |......
T Consensus 157 --~~d~~tG~~~W~~~~~~~~~~~--~~~~~~~~~~~~v~~g~~-~----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 157 --ALNEADGAVKWTVNLDMPSLSL--RGESAPTTAFGAAVVGGD-N----GRVSAVLMEQGQMIWQQRISQATGSTEIDR 227 (376)
T ss_dssp --EEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECCT-T----TEEEEEETTTCCEEEEEECCC---------
T ss_pred --EEECCCCcEEEEEeCCCCceee--cCCCCcEEECCEEEEEcC-C----CEEEEEECCCCcEEEEEecccCCCCccccc
Confidence 6777666 4876543111111 111225666888875322 2 379999997664432 222 2211000
Q ss_pred ---cccceeEECCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCC
Q 041631 250 ---YMETLDLYHDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 250 ---~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
........+|.+++... ...+..+-.+. ..|... ......|. ..++.+++... ++.++.+|.++
T Consensus 228 ~~~~~~~p~~~~~~v~~~~~---~g~l~~~d~~tG~~~w~~~----~~~~~~~~--~~~~~l~~~~~--~g~l~~~d~~t 296 (376)
T 3q7m_A 228 LSDVDTTPVVVNGVVFALAY---NGNLTALDLRSGQIMWKRE----LGSVNDFI--VDGNRIYLVDQ--NDRVMALTIDG 296 (376)
T ss_dssp --CCCCCCEEETTEEEEECT---TSCEEEEETTTCCEEEEEC----CCCEEEEE--EETTEEEEEET--TCCEEEEETTT
T ss_pred ccccCCCcEEECCEEEEEec---CcEEEEEECCCCcEEeecc----CCCCCCce--EECCEEEEEcC--CCeEEEEECCC
Confidence 00122333565555431 23333333333 345432 11111122 24677888877 67899999998
Q ss_pred CcEE
Q 041631 325 QEMR 328 (358)
Q Consensus 325 ~~~~ 328 (358)
++..
T Consensus 297 G~~~ 300 (376)
T 3q7m_A 297 GVTL 300 (376)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 8754
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=60.27 E-value=78 Score=26.79 Aligned_cols=205 Identities=7% Similarity=-0.056 Sum_probs=96.9
Q ss_pred cceEEEeecC-CeeEEEecCcccee-cCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEE
Q 041631 101 DGIYCIFGLR-DRITLWNVATRDSR-TLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCT 178 (358)
Q Consensus 101 ~GLl~l~~~~-~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~ 178 (358)
+..+.+.... ..+.++|+.|++.. .++......+. ........++.++|..+ +-++.- ... ...+.
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~-~l~~~~--~~~-----~~~i~--- 167 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE-EVRPLQPRELVADDATN-TVYISG--IGK-----ESVIW--- 167 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS-SCCCCEEEEEEEETTTT-EEEEEE--ESS-----SCEEE---
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc-ccCCCCCceEEECCCCC-EEEEEe--cCC-----CceEE---
Confidence 3445444443 35699999998763 34332111100 01112235567777544 322221 111 23355
Q ss_pred EEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccccccceeEE
Q 041631 179 IYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETLDLY 257 (358)
Q Consensus 179 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~ 257 (358)
+|+..++.=...-.... .....-.+.-+|...+.+... ..|..+|+.+.+.. .+..+..........+...
T Consensus 168 ~~d~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTG----KMSTGLALDSEGKRLYTTNAD----GELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp EEETTTTEEEEEECCCC----TTCCCCEEETTTTEEEEECTT----SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred EEcCCCCceEEEecCCC----CccceEEECCCCCEEEEEcCC----CeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 78776643211100000 000111334466543344332 36889999887654 4444322111111123433
Q ss_pred -CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 258 -HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 258 -~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+|+..++... ....+.+|-++..+-.. .+.... ..-+.+..+|+ +++... .++.+..||.++++....
T Consensus 240 ~dg~~l~~~~~-~~~~v~~~d~~~~~~~~--~~~~~~-~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 240 TARQRAFITDS-KAAEVLVVDTRNGNILA--KVAAPE-SLAVLFNPARNEAYVTHR-QAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp TTTTEEEEEES-SSSEEEEEETTTCCEEE--EEECSS-CCCEEEETTTTEEEEEET-TTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeC-CCCEEEEEECCCCcEEE--EEEcCC-CceEEECCCCCEEEEEEC-CCCeEEEEECCCCeEEEE
Confidence 5553333332 35788888776533333 332221 12355566776 555442 267899999998887654
No 97
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=60.20 E-value=93 Score=27.61 Aligned_cols=110 Identities=6% Similarity=-0.078 Sum_probs=58.0
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECC-CeeeE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKE-RIWSK 285 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~ 285 (358)
.+|.+||..... ..|.++|+....-..+.. .... ....|+.- +|.|++.... . .-.|++.+. +.-.+
T Consensus 169 ~~g~lY~~d~~~----~~I~~~~~dg~~~~~l~~-~~l~--~P~giavdp~~g~ly~td~~--~-~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 169 VHDKLYWTDSGT----SRIEVANLDGAHRKVLLW-QSLE--KPRAIALHPMEGTIYWTDWG--N-TPRIEASSMDGSGRR 238 (386)
T ss_dssp TTTEEEEEETTT----TEEEECBTTSCSCEEEEC-SSCS--CEEEEEEETTTTEEEEEECS--S-SCEEEEEETTSCSCE
T ss_pred CCCeEEEEcCCC----CeEEEEeCCCCceEEeec-CCCC--CCcEEEEEcCCCeEEEeccC--C-CCEEEEEeCCCCCcE
Confidence 368999986644 378999987654433311 1111 11134444 5666665432 2 133444443 22111
Q ss_pred EEEEccCCccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 286 HLSVTLLGVEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 286 ~~~i~~~~~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
. +....+..|.++. .++.||+.... .+.+..+|+++...+.+.
T Consensus 239 ~--~~~~~~~~PnGlavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 239 I--IADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVI 284 (386)
T ss_dssp E--EECSSCSCEEEEEEEGGGTEEEEEETT-TTEEEEECTTSCSCEEEE
T ss_pred E--EEECCCCCeeeEEEeCCCCEEEEEECC-CCEEEEEeCCCCeeEEEE
Confidence 1 1112344565443 35677777542 568999998876655553
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=59.47 E-value=88 Score=30.66 Aligned_cols=95 Identities=11% Similarity=0.145 Sum_probs=54.2
Q ss_pred EEEEEECCCceEEEecC-CCCcccccccceeEE-C--CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEE
Q 041631 226 IIISFDMANEVFQEVQC-PDIASSAYMETLDLY-H--DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGV 300 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~~-P~~~~~~~~~~L~~~-~--g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~ 300 (358)
.|..+|+.+++...+.. ....... ..+... + |.+.+.... +..+.||-++.+.|.....+... .-..-+.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V--~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPV--WRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCE--EEEEECCTTSCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred cEEEEecCCCCCccceeccCCcCce--EEEEecCCCCCCEEEEEeC--CCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 57777776555543321 1111100 023322 2 565555544 57899999998878777766533 22223444
Q ss_pred eeC--CcEEEEecCCCCEEEEEeCCCC
Q 041631 301 WNN--GGFFVQSDSRPRRLLLYDPNTQ 325 (358)
Q Consensus 301 ~~~--g~i~~~~~~~~~~l~~yd~~t~ 325 (358)
..+ +.+++.... ++.+..||++++
T Consensus 108 sp~~~~~~l~sgs~-dg~I~vwdl~~~ 133 (753)
T 3jro_A 108 APHEYGPLLLVASS-DGKVSVVEFKEN 133 (753)
T ss_dssp CCGGGCSEEEEEET-TSEEEEEECCSS
T ss_pred CCCCCCCEEEEEeC-CCcEEEEEeecC
Confidence 444 656555432 678999999877
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=59.45 E-value=83 Score=26.83 Aligned_cols=70 Identities=11% Similarity=0.017 Sum_probs=37.8
Q ss_pred CCeEEEEEecCCCcEEEEEEECC---------Cee-------eEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKE---------RIW-------SKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLY 320 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~---------~~W-------~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~y 320 (358)
+|++.+.... ...+.+|-+.. ..| .....+... ....-+.+..++..++.... ++.+..|
T Consensus 153 ~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~ 229 (372)
T 1k8k_C 153 NSVLLAAGSC--DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH-DSTVCLA 229 (372)
T ss_dssp TSSEEEEEET--TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred CCCEEEEEcC--CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC-CCEEEEE
Confidence 5665555443 57899998642 112 222222211 11223444456655555432 6789999
Q ss_pred eCCCCcEEEe
Q 041631 321 DPNTQEMRDL 330 (358)
Q Consensus 321 d~~t~~~~~v 330 (358)
|+++++....
T Consensus 230 d~~~~~~~~~ 239 (372)
T 1k8k_C 230 DADKKMAVAT 239 (372)
T ss_dssp EGGGTTEEEE
T ss_pred ECCCCceeEE
Confidence 9987765443
No 100
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=59.18 E-value=47 Score=28.72 Aligned_cols=108 Identities=13% Similarity=0.021 Sum_probs=50.9
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceE--EEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVF--QEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSK 285 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~--~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~ 285 (358)
+|.+||..... ..|..+++.+... ..+.. ... ....|+.- +|.|++.... ...+.+..++. ...+
T Consensus 46 ~~~lyw~D~~~----~~I~r~~~~g~~~~~~~~~~--~l~--~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG-~~~~ 114 (318)
T 3sov_A 46 HGLIYWSDVSE----EAIKRTEFNKTESVQNVVVS--GLL--SPDGLACDWLGEKLYWTDSE--TNRIEVSNLDG-SLRK 114 (318)
T ss_dssp GTEEEEEETTT----TEEEEEETTSSSCCCEEEEE--CCS--CCCEEEEETTTTEEEEEETT--TTEEEEEETTS-CSCE
T ss_pred CCEEEEEECCC----CcEEEEEccCCCceEEEEcC--CCC--CccEEEEEcCCCeEEEEECC--CCEEEEEECCC-CcEE
Confidence 58999986554 3799999876521 11110 000 01134433 5666665432 45565555553 1111
Q ss_pred EEEEccCCccceEEE--e-eCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 286 HLSVTLLGVEEPLGV--W-NNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 286 ~~~i~~~~~~~p~~~--~-~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
. +....+..|.++ . .+|.+++.......++..+|++....+.+
T Consensus 115 ~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 115 V--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp E--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred E--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 1 111123334333 2 24555555432235666776665444443
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=59.11 E-value=82 Score=26.67 Aligned_cols=59 Identities=8% Similarity=0.108 Sum_probs=32.6
Q ss_pred CcEEEEEEECC-CeeeEEEEEccCC-------------ccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 270 NNHYEIWVLKE-RIWSKHLSVTLLG-------------VEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 270 ~~~l~IW~l~~-~~W~~~~~i~~~~-------------~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
...+.||.++. ..-.....+.... -..-+.+..++.+++.... ++.+..||+++++...
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS-DGRFSFWDKDARTKLK 309 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET-TSCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc-CCeEEEEECCCCcEEE
Confidence 67999999987 2111112221110 0122344456655555432 6789999999876544
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=57.35 E-value=1.3e+02 Score=28.24 Aligned_cols=110 Identities=9% Similarity=0.028 Sum_probs=63.4
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.+|...... ..|..+|..+.+. ..++..... . .+... +|+..++... ...+.+|-+....-..+.
T Consensus 148 ~~~~~vs~~~d----~~V~v~D~~t~~~~~~i~~g~~~---~--~v~~spdg~~l~v~~~--d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 148 PNLFSVTLRDA----GQIALVDGDSKKIVKVIDTGYAV---H--ISRMSASGRYLLVIGR--DARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp GGEEEEEEGGG----TEEEEEETTTCCEEEEEECSTTE---E--EEEECTTSCEEEEEET--TSEEEEEETTSSSCEEEE
T ss_pred CCEEEEEEcCC----CeEEEEECCCceEEEEEecCccc---c--eEEECCCCCEEEEECC--CCeEEEEECcCCCCcEEE
Confidence 57666554443 3788899988654 445432221 1 23333 6776666654 389999999321122334
Q ss_pred EEccCCccceEEEee----CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 288 SVTLLGVEEPLGVWN----NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 288 ~i~~~~~~~p~~~~~----~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
++......+-+++.. +|+.++......+.+.+||.+|.+..+.
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccccee
Confidence 444322234566667 7766655431157899999988776553
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=55.75 E-value=92 Score=26.18 Aligned_cols=99 Identities=8% Similarity=-0.063 Sum_probs=51.8
Q ss_pred EEEEEECCC-c--eEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCC--e--eeEEEEEccC-C--
Q 041631 226 IIISFDMAN-E--VFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKER--I--WSKHLSVTLL-G-- 293 (358)
Q Consensus 226 ~il~fD~~~-e--~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~--~--W~~~~~i~~~-~-- 293 (358)
.|..+|+.+ . .......+..... ..+... +|++.++... ...+.||.++.. . ......+... .
T Consensus 171 ~i~i~d~~~~~~~~~~~~~~~~~~~i---~~i~~~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIEESGLKYQI---RDVALLPKEQEGYACSSI--DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSSCE---EEEEECSGGGCEEEEEET--TSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred eEEEEECCccccccceeeecCCCCce---eEEEECCCCCCEEEEEec--CCcEEEEEEcCCCcccccccceeeecccccc
Confidence 688899887 2 2332322221110 123333 4565555544 678999998752 1 2233333221 1
Q ss_pred -------ccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 294 -------VEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 294 -------~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
...-+.+..++.+++.... ++.+..||+++++....
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGS-DGIISCWNLQTRKKIKN 288 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEET-TSCEEEEETTTTEEEEE
T ss_pred cccccceeEEEEEEcCCCCEEEEecC-CceEEEEcCccHhHhhh
Confidence 1123344456665554432 67899999998775443
No 104
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=55.74 E-value=1.3e+02 Score=28.06 Aligned_cols=195 Identities=8% Similarity=-0.016 Sum_probs=99.2
Q ss_pred ecceEEEeecCC-eeEEEecCccceec-CCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 100 YDGIYCIFGLRD-RITLWNVATRDSRT-LPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 100 ~~GLl~l~~~~~-~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
-+|.++.....+ .+.|+|+.|++... ++.. . ...++.++|.. .|-.+.- . .-.+.
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g-------~----~~~~v~~spdg-~~l~v~~--~-------d~~V~-- 203 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-------Y----AVHISRMSASG-RYLLVIG--R-------DARID-- 203 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECS-------T----TEEEEEECTTS-CEEEEEE--T-------TSEEE--
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecC-------c----ccceEEECCCC-CEEEEEC--C-------CCeEE--
Confidence 367766665443 45999999987542 3211 1 13455666643 3333321 1 23455
Q ss_pred EEEec--CCCCceecccccCeeeeecCCcceE--Ee----CCe-EEEEEeecCCCceEEEEEECCCceE-EEecCCCCcc
Q 041631 178 TIYNL--RTNSWRDLVCFKTIHYCIPHSHGCT--YL----DGL-CHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIAS 247 (358)
Q Consensus 178 ~vyss--~~~~W~~~~~~~~~~~~~~~~~~~v--~~----~G~-lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~ 247 (358)
+|+. .++. .... ++.. ..+.++ .- +|. +|-..... ..|..+|..+.+. ..++.+....
T Consensus 204 -v~D~~~~t~~--~~~~---i~~g--~~p~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 204 -MIDLWAKEPT--KVAE---IKIG--IEARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTV 271 (543)
T ss_dssp -EEETTSSSCE--EEEE---EECC--SEEEEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECS
T ss_pred -EEECcCCCCc--EEEE---EecC--CCcceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCccc
Confidence 8887 4432 1111 1110 111122 22 675 44433333 3688999887654 4455532110
Q ss_pred c----ccc---cceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEE
Q 041631 248 S----AYM---ETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLL 319 (358)
Q Consensus 248 ~----~~~---~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~ 319 (358)
. ... ..+... +|...++... ...++.+|-+.+..-.++..+........+++..+|+.++......+.+.+
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~-~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVK-ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEET-TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEEC-CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 0 011 123333 3444444443 356788887776221223344432334456677788766554322678999
Q ss_pred EeCCCCcEEEe
Q 041631 320 YDPNTQEMRDL 330 (358)
Q Consensus 320 yd~~t~~~~~v 330 (358)
+|.+++++...
T Consensus 351 ~D~~tg~l~~~ 361 (543)
T 1nir_A 351 IDSKDRRLSAL 361 (543)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCeEEEe
Confidence 99999988764
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=55.31 E-value=99 Score=26.40 Aligned_cols=68 Identities=6% Similarity=-0.109 Sum_probs=39.5
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
+|.+.+.... +..+.||-++.+.-..........-..-+.+..+|.++..... ++.+..||+++++..
T Consensus 138 ~~~~l~s~s~--dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~-dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 138 NTEYFIWADN--RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP-DGILDVYNLSSPDQA 205 (343)
T ss_dssp -CCEEEEEET--TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-TSCEEEEESSCTTSC
T ss_pred CCCEEEEEeC--CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-CCEEEEEECCCCCCC
Confidence 4555554443 5789999998732222211111112234556667877776332 678999999988754
No 106
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=55.01 E-value=1.1e+02 Score=26.73 Aligned_cols=210 Identities=10% Similarity=0.026 Sum_probs=104.5
Q ss_pred eeecceEEEeecCC-eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 98 GPYDGIYCIFGLRD-RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 98 ~s~~GLl~l~~~~~-~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
+..+|.|.+.+... +++..++.++....+..... ....++.+|+..+..-+. . . ....++
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~ly~~----d-~----~~~~I~- 141 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDKLYWT----D-S----GTSRIE- 141 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTEEEEE----E-T----TTTEEE-
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCC---------CCccEEEEecCCCeEEEE----c-C----CCCeEE-
Confidence 34567777666443 45778887765444432221 122466677655432211 1 1 133556
Q ss_pred EEEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
+++..+..-+.... ..+ ..+.++.+ +|.+||..... ...|..+|+....-..+- ...... ...
T Consensus 142 --~~~~dG~~~~~l~~-~~l-----~~P~~iavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~-~~~~~~--PnG 207 (349)
T 3v64_C 142 --VANLDGAHRKVLLW-QSL-----EKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRIIA-DTHLFW--PNG 207 (349)
T ss_dssp --EEETTSCSCEEEEC-TTC-----SCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEESC-CSSCSC--EEE
T ss_pred --EEcCCCCceEEEEe-CCC-----CCcceEEEecCcCeEEEeccCC---CCEEEEEeCCCCCcEEEE-ECCCCC--cce
Confidence 77766543222211 111 11223333 58999987544 147999998876544431 111111 114
Q ss_pred eeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEe-eCCcEEEEecCCCCEEEEEeC-CCCcEEE
Q 041631 254 LDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVW-NNGGFFVQSDSRPRRLLLYDP-NTQEMRD 329 (358)
Q Consensus 254 L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~-~~g~i~~~~~~~~~~l~~yd~-~t~~~~~ 329 (358)
|+.. +|+|++.... ...+...-++.. - ...+-...+..|.++. .++.++..... .+.+..+|. ..+..+.
T Consensus 208 la~d~~~~~lY~aD~~--~~~I~~~~~dG~-~--~~~~~~~~~~~P~giav~~~~ly~td~~-~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAK--HHVIERANLDGS-H--RKAVISQGLPHPFAITVFEDSLYWTDWH-TKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTSC-S--CEEEECSSCSSEEEEEEETTEEEEEETT-TTEEEEEETTTCCSCEE
T ss_pred EEEeCCCCEEEEEECC--CCEEEEEeCCCC-c--eEEEEeCCCCCceEEEEECCEEEEecCC-CCeEEEEEccCCCccEE
Confidence 5543 6777776543 455555444431 1 1111112344565544 45667776543 678999994 4444455
Q ss_pred eeecCc-eeEEEEeeecc
Q 041631 330 LGLRSF-WFSVYNFKESL 346 (358)
Q Consensus 330 v~~~~~-~~~~~~y~~sl 346 (358)
+..... +..+..|-++.
T Consensus 282 i~~~~~~p~gi~v~~~~~ 299 (349)
T 3v64_C 282 IRNKLHFPMDIHTLHPQR 299 (349)
T ss_dssp EECSCSCCCCEEEECGGG
T ss_pred eccCCCCCceEEEEcccc
Confidence 542211 24455555543
No 107
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=54.75 E-value=94 Score=26.02 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=97.9
Q ss_pred eecceEEEeecC-CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGLR-DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
..+|-|.+.+.. .+++.+||.|++...+..+. ...++.+++..+ + ++.. ...+.
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~-l-~v~~----------~~~l~-- 76 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG-Y-VATI----------GTKFC-- 76 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-----------CEEEEEEBTTSS-E-EEEE----------TTEEE--
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----------ceEEEEECCCCC-E-EEEE----------CCeEE--
Confidence 334555555443 35699999998765543221 123456666443 2 2221 12455
Q ss_pred EEEecCCCCceecccc-cCeeeeecCCcceE--EeCCeEEEEEeecC-------CCceEEEEEECCCceEEEe---cCCC
Q 041631 178 TIYNLRTNSWRDLVCF-KTIHYCIPHSHGCT--YLDGLCHWLWELED-------SKHKIIISFDMANEVFQEV---QCPD 244 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~-~~~~~~~~~~~~~v--~~~G~lywl~~~~~-------~~~~~il~fD~~~e~~~~i---~~P~ 244 (358)
+|+..++..+..... ...+. ...+.+ --+|.+|+-..... .....|..+|.....-... ..|.
T Consensus 77 -~~d~~~g~~~~~~~~~~~~~~---~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn 152 (297)
T 3g4e_A 77 -ALNWKEQSAVVLATVDNDKKN---NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISN 152 (297)
T ss_dssp -EEETTTTEEEEEEECCTTCSS---EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEE
T ss_pred -EEECCCCcEEEEEecCCCCCC---CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccccc
Confidence 788888776654321 11111 011123 33688765443321 1234788888764322211 1111
Q ss_pred CcccccccceeEE-CCe-EEEEEecCCCcEEEEEEEC-C-CeeeEEEEE-ccC-Cccce--EEEeeCCcEEEEecCCCCE
Q 041631 245 IASSAYMETLDLY-HDS-LSLLFLNTTNNHYEIWVLK-E-RIWSKHLSV-TLL-GVEEP--LGVWNNGGFFVQSDSRPRR 316 (358)
Q Consensus 245 ~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~l~IW~l~-~-~~W~~~~~i-~~~-~~~~p--~~~~~~g~i~~~~~~~~~~ 316 (358)
.++.. +|+ |++.... ...+.+|.++ + +.......+ ... ....| +++..+|.|++.... .+.
T Consensus 153 --------gi~~spdg~~lyv~~~~--~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-~~~ 221 (297)
T 3g4e_A 153 --------GLDWSLDHKIFYYIDSL--SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-GGR 221 (297)
T ss_dssp --------EEEECTTSCEEEEEEGG--GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-TTE
T ss_pred --------ceEEcCCCCEEEEecCC--CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-CCE
Confidence 23333 554 4444332 4567777765 2 443322222 111 11234 444567888888652 467
Q ss_pred EEEEeCCCCcE-EEeeec
Q 041631 317 LLLYDPNTQEM-RDLGLR 333 (358)
Q Consensus 317 l~~yd~~t~~~-~~v~~~ 333 (358)
|..||++++++ ..+...
T Consensus 222 v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEECTTTCCEEEEEECS
T ss_pred EEEEcCCCceEEEEEECC
Confidence 99999996665 445444
No 108
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=54.74 E-value=88 Score=25.64 Aligned_cols=194 Identities=11% Similarity=0.049 Sum_probs=93.9
Q ss_pred eeecceEEEeecCC-eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 98 GPYDGIYCIFGLRD-RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 98 ~s~~GLl~l~~~~~-~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
+..+|.|.+.+... ++.++++.++....+-... .....++.+|+..+..-+. . .. ...+.
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---------~~~p~~ia~d~~~~~lyv~---d--~~----~~~I~- 104 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---------LGSPEGIALDHLGRTIFWT---D--SQ----LDRIE- 104 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---------CCCEEEEEEETTTTEEEEE---E--TT----TTEEE-
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC---------CCCccEEEEEecCCeEEEE---E--CC----CCEEE-
Confidence 33456666665433 4588888766433322111 0133567777754432111 1 11 33455
Q ss_pred EEEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
+++..+..-+.... .. ...+.++.+ +|.+||...... ...|.++++.......+... ... ....
T Consensus 105 --~~~~~g~~~~~~~~-~~-----~~~P~~i~vd~~~g~lyv~~~~~~--~~~I~~~~~dg~~~~~~~~~-~~~--~P~g 171 (267)
T 1npe_A 105 --VAKMDGTQRRVLFD-TG-----LVNPRGIVTDPVRGNLYWTDWNRD--NPKIETSHMDGTNRRILAQD-NLG--LPNG 171 (267)
T ss_dssp --EEETTSCSCEEEEC-SS-----CSSEEEEEEETTTTEEEEEECCSS--SCEEEEEETTSCCCEEEECT-TCS--CEEE
T ss_pred --EEEcCCCCEEEEEE-CC-----CCCccEEEEeeCCCEEEEEECCCC--CcEEEEEecCCCCcEEEEEC-CCC--CCcE
Confidence 77776533222211 11 012234433 589999765321 14788888876554443211 111 1113
Q ss_pred eeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEe-eCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 254 LDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVW-NNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 254 L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~-~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
++.. ++.|++.... ...+.+.-++.. - ....+. ....|.++. +++.+++.... .+.+..+|+++++..+.
T Consensus 172 ia~d~~~~~lyv~d~~--~~~I~~~~~~g~-~-~~~~~~--~~~~P~gi~~d~~~lyva~~~-~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAG--THRAECLNPAQP-G-RRKVLE--GLQYPFAVTSYGKNLYYTDWK-TNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTEE-E-EEEEEE--CCCSEEEEEEETTEEEEEETT-TTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEEECC--CCEEEEEecCCC-c-eEEEec--CCCCceEEEEeCCEEEEEECC-CCeEEEEeCCCCCceEE
Confidence 4443 4567665543 344444443321 1 111111 233455554 35667766542 57999999998775543
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=54.73 E-value=1.1e+02 Score=26.86 Aligned_cols=196 Identities=13% Similarity=0.142 Sum_probs=95.3
Q ss_pred eecceEEEeecCC-eeEEEecCcccee-cCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 99 PYDGIYCIFGLRD-RITLWNVATRDSR-TLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 99 s~~GLl~l~~~~~-~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
+.+|-+++....+ .+.++|+.+++.. .++... ....++.++|..+ +-++. . . . ...+.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~l~~~-~-~-~-----~~~i~- 237 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKILLYDPIRD-LVYCS-N-W-I-----SEDIS- 237 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEEEEETTTT-EEEEE-E-T-T-----TTEEE-
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEEEEcCCCC-EEEEE-e-c-C-----CCcEE-
Confidence 4466665555443 4599999886543 232111 1234456666433 22221 1 0 1 23455
Q ss_pred EEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCC----CceEEEEEECCCceEEEe-cCCCCcccccc
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDS----KHKIIISFDMANEVFQEV-QCPDIASSAYM 251 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----~~~~il~fD~~~e~~~~i-~~P~~~~~~~~ 251 (358)
+|+.+++.....-.....+..+ ...-+|...+.+..... ....|..+|+.+.+.... ..+...
T Consensus 238 --~~d~~~~~~~~~~~~~~~~~~~-----~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----- 305 (433)
T 3bws_A 238 --VIDRKTKLEIRKTDKIGLPRGL-----LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK----- 305 (433)
T ss_dssp --EEETTTTEEEEECCCCSEEEEE-----EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE-----
T ss_pred --EEECCCCcEEEEecCCCCceEE-----EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc-----
Confidence 8888776443221111111100 22235654444443211 124788999988765432 212111
Q ss_pred cceeEE-CCe-EEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCC--------------CC
Q 041631 252 ETLDLY-HDS-LSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSR--------------PR 315 (358)
Q Consensus 252 ~~L~~~-~g~-L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~--------------~~ 315 (358)
..+... +|+ +.+... ....+.+|-++... ....+....-..-+++..+|..++..... ++
T Consensus 306 ~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 306 RHIVSGNTENKIYVSDM--CCSKIEVYDLKEKK--VQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EEEEECSSTTEEEEEET--TTTEEEEEETTTTE--EEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred ceEEECCCCCEEEEEec--CCCEEEEEECCCCc--EEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 123322 454 444433 36789999987632 22333322222245555677655544311 24
Q ss_pred EEEEEeCCCCcEEEe
Q 041631 316 RLLLYDPNTQEMRDL 330 (358)
Q Consensus 316 ~l~~yd~~t~~~~~v 330 (358)
.+..||+++++....
T Consensus 382 ~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 382 KVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 899999998876654
No 110
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=54.64 E-value=1.1e+02 Score=26.56 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=49.0
Q ss_pred EEEEEECCCceE-EEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEe
Q 041631 226 IIISFDMANEVF-QEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVW 301 (358)
Q Consensus 226 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~ 301 (358)
.|..+|+++.+. ..+..+...... ..+... ++.+.+.... +..+.||-+..+. .+..+... .-..-+++.
T Consensus 193 ~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~l~sg~~--dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~fs 266 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCSAPGYLP--TSLAWHPQQSEVFVFGDE--NGTVSLVDTKSTS--CVLSSAVHSQCVTGLVFS 266 (344)
T ss_dssp CEEEEETTSSSCEEECC----CCCE--EEEEECSSCTTEEEEEET--TSEEEEEESCC----CCEEEECCSSCEEEEEEC
T ss_pred ccccccccccceeeeeecceeeccc--eeeeecCCCCcceEEecc--CCcEEEEECCCCc--EEEEEcCCCCCEEEEEEc
Confidence 578889887653 333322211110 022222 4455544443 5789999877521 12222221 111234444
Q ss_pred eCC-cEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 302 NNG-GFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 302 ~~g-~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
.++ .++.... .++.+.+||.+++++.++
T Consensus 267 p~g~~~lasgs-~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 267 PHSVPFLASLS-EDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp SSSSCCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred cCCCeEEEEEe-CCCeEEEEECCCCcEEEE
Confidence 555 4444332 167899999999887654
No 111
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=54.52 E-value=89 Score=25.64 Aligned_cols=193 Identities=11% Similarity=0.058 Sum_probs=94.6
Q ss_pred EeeeecceEEEeec-CCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCccccee
Q 041631 96 LGGPYDGIYCIFGL-RDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEF 174 (358)
Q Consensus 96 ~~~s~~GLl~l~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 174 (358)
+....+|-+.+... ...+.++||. ++...++.+.. .....++..|+.. ..-+ ... . ...+
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~--------~~~~~~i~~~~~g-~l~v---~~~-~-----~~~v 85 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP--------DAKVMCLIVSSLG-DIWF---TEN-G-----ANKI 85 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTS-CEEE---EET-T-----TTEE
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC--------CCcceeEEECCCC-CEEE---Eec-C-----CCeE
Confidence 33344676666654 3456888988 66655443211 0123455556433 2111 111 0 2234
Q ss_pred eEEEEEecCCCCceecccccCeeeeecCCcceEEe--CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCccccccc
Q 041631 175 SLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL--DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYME 252 (358)
Q Consensus 175 e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 252 (358)
. +|+.. +..+....+.. ...+.++.+ +|.+|+..... ..|..+|.. .+...+.+|..... ..
T Consensus 86 ~---~~d~~-g~~~~~~~~~~-----~~~~~~i~~~~~g~l~v~~~~~----~~i~~~~~~-g~~~~~~~~~~~~~--~~ 149 (300)
T 2qc5_A 86 G---KLSKK-GGFTEYPLPQP-----DSGPYGITEGLNGDIWFTQLNG----DRIGKLTAD-GTIYEYDLPNKGSY--PA 149 (300)
T ss_dssp E---EECTT-SCEEEEECSST-----TCCEEEEEECSTTCEEEEETTT----TEEEEECTT-SCEEEEECSSTTCC--EE
T ss_pred E---EECCC-CCeEEecCCCC-----CCCCccceECCCCCEEEEccCC----CeEEEECCC-CCEEEccCCCCCCC--ce
Confidence 4 66665 55543321100 011223333 57877544322 379999998 66666655532211 11
Q ss_pred ceeEE-CCeEEEEEecCCCcEEEEEEECC-CeeeEEEEEccCCccceEE--EeeCCcEEEEecCCCCEEEEEeCCCCcEE
Q 041631 253 TLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLLGVEEPLG--VWNNGGFFVQSDSRPRRLLLYDPNTQEMR 328 (358)
Q Consensus 253 ~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~p~~--~~~~g~i~~~~~~~~~~l~~yd~~t~~~~ 328 (358)
.+... +|+|.+.... ... |++++. +.... ... +.....|.. +..+|.+++.... .+.+..||+ ++++.
T Consensus 150 ~i~~d~~g~l~v~~~~--~~~--i~~~~~~g~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 150 FITLGSDNALWFTENQ--NNS--IGRITNTGKLEE-YPL-PTNAAAPVGITSGNDGALWFVEIM-GNKIGRITT-TGEIS 221 (300)
T ss_dssp EEEECTTSSEEEEETT--TTE--EEEECTTCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT-TCCEE
T ss_pred eEEECCCCCEEEEecC--CCe--EEEECCCCcEEE-eeC-CCCCCCcceEEECCCCCEEEEccC-CCEEEEEcC-CCcEE
Confidence 34443 6776655432 334 444443 43332 111 122333443 4457888887652 457999999 56666
Q ss_pred Eee
Q 041631 329 DLG 331 (358)
Q Consensus 329 ~v~ 331 (358)
.+.
T Consensus 222 ~~~ 224 (300)
T 2qc5_A 222 EYD 224 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 112
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=54.46 E-value=1.1e+02 Score=29.67 Aligned_cols=112 Identities=12% Similarity=0.104 Sum_probs=59.8
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCce--EEEecCCCCccc-------ccccceeEECCeEEEEEecCCCcEEEEE
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANEV--FQEVQCPDIASS-------AYMETLDLYHDSLSLLFLNTTNNHYEIW 276 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~-------~~~~~L~~~~g~L~~~~~~~~~~~l~IW 276 (358)
++..+|.+|.....+ .|.++|..+.+ |+. ..+..... .....+...+|++++... ...+..+
T Consensus 73 P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~al 143 (677)
T 1kb0_A 73 PVVVDGIMYVSASWS-----VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLIAL 143 (677)
T ss_dssp CEEETTEEEEECGGG-----CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEEEE
T ss_pred CEEECCEEEEECCCC-----eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEEEE
Confidence 678999999766543 59999987764 443 33221110 001134445676665432 2344444
Q ss_pred EECC--CeeeEEEEEcc---CC-ccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEE
Q 041631 277 VLKE--RIWSKHLSVTL---LG-VEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMR 328 (358)
Q Consensus 277 ~l~~--~~W~~~~~i~~---~~-~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~ 328 (358)
-.+. ..|......+. .. ...|+. .++.+++.... ..+.|+.||.+|++..
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 4433 45665321010 11 123443 25666665431 1368999999998865
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=53.97 E-value=1.1e+02 Score=26.43 Aligned_cols=69 Identities=12% Similarity=0.057 Sum_probs=36.0
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEE--EccC---CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLS--VTLL---GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~--i~~~---~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+|+..+.... +..+.+|-+....-..... .... ..........++.+++... ++.+..||+++++....
T Consensus 256 ~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~ 329 (408)
T 4a11_B 256 DGLHLLTVGT--DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY--GSTIAVYTVYSGEQITM 329 (408)
T ss_dssp TSSEEEEEET--TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE--TTEEEEEETTTCCEEEE
T ss_pred CCCEEEEecC--CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec--CCEEEEEECcCCcceee
Confidence 5655554443 5689999988721111110 0000 1111111223456666666 67899999887765443
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=53.58 E-value=93 Score=26.19 Aligned_cols=69 Identities=7% Similarity=-0.117 Sum_probs=39.8
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcEEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
++++.+.... ..++.+|-++.+...+........-..-+.+..+|+ +++... ..+.+..||+++++...
T Consensus 10 ~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNY--PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEET--TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCC--CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEE
Confidence 5566555544 578888887765433333222100123345556776 444432 26789999999887654
No 115
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=53.28 E-value=1.2e+02 Score=26.95 Aligned_cols=127 Identities=9% Similarity=-0.072 Sum_probs=65.0
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.|||...... ..|..+|+....-..+-. ..... ...|+.. +++|+++... ...+..--++. .-.+..
T Consensus 213 ~g~ly~td~~~~---~~I~~~~~dG~~~~~~~~-~~l~~--P~glavd~~~~~lY~aD~~--~~~I~~~d~dG-~~~~~~ 283 (400)
T 3p5b_L 213 HGFMYWTDWGTP---AKIKKGGLNGVDIYSLVT-ENIQW--PNGITLDLLSGRLYWVDSK--LHSISSIDVNG-GNRKTI 283 (400)
T ss_dssp TTEEEEEECSSS---CCEEEEETTSCSCEEEEC-SSCSC--EEEEEEETTTTEEEEEETT--TTEEEEEETTS-CCCEEE
T ss_pred cCeEEEEeCCCC---CEEEEEeCCCCccEEEEE-CCCCc--eEEEEEEeCCCEEEEEECC--CCEEEEEeCCC-CccEEE
Confidence 689999865322 368999987754443311 11111 1145544 6777776533 34444444443 111111
Q ss_pred EEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCc-EEEeeecCc-eeEEEEeeecc
Q 041631 288 SVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQE-MRDLGLRSF-WFSVYNFKESL 346 (358)
Q Consensus 288 ~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~-~~~v~~~~~-~~~~~~y~~sl 346 (358)
.-....+..|.++.- ++.||..... .+.|..+|..+++ .+.+...-. +..+..|-+..
T Consensus 284 ~~~~~~l~~P~gl~v~~~~lywtd~~-~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 284 LEDEKRLAHPFSLAVFEDKVFWTDII-NEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 344 (400)
T ss_dssp EECSSTTSSEEEEEEETTEEEEEESS-SCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGG
T ss_pred EeCCCCCCCCEEEEEeCCEEEEecCC-CCeEEEEEcCCCCceEEEecCCCCCceEEEEeecc
Confidence 111124556777653 4556665432 5689999965554 444432211 25566666554
No 116
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=53.24 E-value=1.2e+02 Score=26.88 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=52.3
Q ss_pred EEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEE----
Q 041631 226 IIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLG---- 299 (358)
Q Consensus 226 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~---- 299 (358)
.|..+|+.+.+. ..+..|...... ..+... +|++.+.... +..+.||-+..+.-.....+....-..-+.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v--~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAV--SSICIDEECCVLILGTT--RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCE--EEEEECTTSCEEEEEET--TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCce--EEEEECCCCCEEEEEcC--CCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 789999987654 444443211110 123333 5666555544 578999998863322222111111001111
Q ss_pred EeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 300 VWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 300 ~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+..++.+++.... ++.+..||+++++....
T Consensus 269 ~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 269 YGKNSVIVVGGSS-KTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp TCTTEEEEEEEST-TEEEEEEETTTTEEEEE
T ss_pred cCCCccEEEEEcC-CCcEEEEEcCCCcEEEE
Confidence 1134555555442 56799999998876554
No 117
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=52.83 E-value=1.5e+02 Score=28.74 Aligned_cols=112 Identities=14% Similarity=0.167 Sum_probs=60.3
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCc--eEEEecCCCCccc-------ccccceeEECCeEEEEEecCCCcEEEEE
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANE--VFQEVQCPDIASS-------AYMETLDLYHDSLSLLFLNTTNNHYEIW 276 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~~-------~~~~~L~~~~g~L~~~~~~~~~~~l~IW 276 (358)
++..+|.+|.....+ .|.++|..+. .|+. ..+..... .....+...+|++++... ...+..+
T Consensus 66 P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~Al 136 (689)
T 1yiq_A 66 PIVVDGVMYTTGPFS-----VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLEAI 136 (689)
T ss_dssp CEEETTEEEEECGGG-----CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEEE
T ss_pred CEEECCEEEEEcCCC-----eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEEEE
Confidence 678899999765543 5999998765 4553 22221110 001123445676655432 2444444
Q ss_pred EECC--CeeeEEEEEccC---C-ccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEE
Q 041631 277 VLKE--RIWSKHLSVTLL---G-VEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMR 328 (358)
Q Consensus 277 ~l~~--~~W~~~~~i~~~---~-~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~ 328 (358)
-.+. ..|......+.. . ...|+. .++.+++.... ..+.|+.||.+|++..
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 137 DAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 4433 567654321211 1 134544 26666665431 1468999999998854
No 118
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=51.82 E-value=1.6e+02 Score=28.43 Aligned_cols=112 Identities=15% Similarity=0.174 Sum_probs=58.9
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCc--eEEEecCCCCccc--c-----cccceeEECCeEEEEEecCCCcEEEEE
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANE--VFQEVQCPDIASS--A-----YMETLDLYHDSLSLLFLNTTNNHYEIW 276 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~~--~-----~~~~L~~~~g~L~~~~~~~~~~~l~IW 276 (358)
++..+|.+|.....+ .|.++|..+. .|+. ..+..... . ....+...+|++++... ...+..+
T Consensus 62 P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~al 132 (668)
T 1kv9_A 62 PLFHDGVIYTSMSWS-----RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLIAL 132 (668)
T ss_dssp CEEETTEEEEEEGGG-----EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEEEE
T ss_pred CEEECCEEEEECCCC-----eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcC---CCEEEEE
Confidence 678999999766543 6999998765 4553 22221110 0 00123445676655432 2344333
Q ss_pred EECC--CeeeEEEEEcc--CC-ccceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEE
Q 041631 277 VLKE--RIWSKHLSVTL--LG-VEEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMR 328 (358)
Q Consensus 277 ~l~~--~~W~~~~~i~~--~~-~~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~ 328 (358)
-.+. ..|.....-.. .. ...|+. .++.+++.... ..+.++.||.+|++..
T Consensus 133 D~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 133 DAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp ETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 3333 56665321000 01 123443 25666665431 1368999999988864
No 119
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=51.50 E-value=1.2e+02 Score=26.07 Aligned_cols=73 Identities=7% Similarity=0.174 Sum_probs=43.7
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC--Cccc--eEEEeeCCcEEEEecCC-CCEEEEEeC--CCCcEEEe
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL--GVEE--PLGVWNNGGFFVQSDSR-PRRLLLYDP--NTQEMRDL 330 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~--~~~~--p~~~~~~g~i~~~~~~~-~~~l~~yd~--~t~~~~~v 330 (358)
+|+..++... ....+.+|.++.+.......+... .... -+.+..+|+.++..... .+.+..|++ ++++++.+
T Consensus 221 dg~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 221 DGKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp TSSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEe
Confidence 6765444432 357899999987666666655432 1222 34555688755543322 357888776 46776665
Q ss_pred e
Q 041631 331 G 331 (358)
Q Consensus 331 ~ 331 (358)
.
T Consensus 300 ~ 300 (361)
T 3scy_A 300 G 300 (361)
T ss_dssp E
T ss_pred e
Confidence 4
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=51.35 E-value=1e+02 Score=25.45 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=37.7
Q ss_pred CcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 270 NNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 270 ~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+.++.||-++.+.-.+....... ....-+.+..+++.++.... ++.+..||.++++....
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~-Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-SAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-TSEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC-CCcEEEeecCCceeEEE
Confidence 46899998876544444333211 12234555567777666442 67899999999876554
No 121
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=51.32 E-value=1e+02 Score=25.28 Aligned_cols=110 Identities=11% Similarity=-0.036 Sum_probs=57.7
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.+||..... ..|..+|+.......+. +.... ....++.. +|.|++.........+....++. .-.+.
T Consensus 90 ~~~lyv~d~~~----~~I~~~~~~g~~~~~~~-~~~~~--~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~- 160 (267)
T 1npe_A 90 GRTIFWTDSQL----DRIEVAKMDGTQRRVLF-DTGLV--NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRI- 160 (267)
T ss_dssp TTEEEEEETTT----TEEEEEETTSCSCEEEE-CSSCS--SEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEE-
T ss_pred CCeEEEEECCC----CEEEEEEcCCCCEEEEE-ECCCC--CccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEE-
Confidence 57899876543 37999998765433331 21111 11134443 57777765321134554444443 21111
Q ss_pred EEccCCccceEE--EeeC-CcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 288 SVTLLGVEEPLG--VWNN-GGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 288 ~i~~~~~~~p~~--~~~~-g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+....+..|.+ +..+ +.+++.... .+.+..+|++++..+.+
T Consensus 161 -~~~~~~~~P~gia~d~~~~~lyv~d~~-~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 161 -LAQDNLGLPNGLTFDAFSSQLCWVDAG-THRAECLNPAQPGRRKV 204 (267)
T ss_dssp -EECTTCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTEEEEEEE
T ss_pred -EEECCCCCCcEEEEcCCCCEEEEEECC-CCEEEEEecCCCceEEE
Confidence 11123334544 4444 566666542 57899999987665554
No 122
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.30 E-value=1.4e+02 Score=26.66 Aligned_cols=112 Identities=11% Similarity=0.008 Sum_probs=61.2
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEec---CCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeee
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQ---CPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWS 284 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~---~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~ 284 (358)
+|.+|+ +... ..|..+|+.+.....+. ........+...++.. +|.|++.... ...+..|..+ +.-.
T Consensus 230 ~g~lyv-~d~~----~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--~~~I~~~~~~-g~~~ 301 (409)
T 3hrp_A 230 EEWLYF-VDSN----KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--LSSVYKITPD-GECE 301 (409)
T ss_dssp SSEEEE-ECTT----CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT--TTEEEEECTT-CCEE
T ss_pred CCeEEE-EECC----CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC--CCEEEEEecC-CCEE
Confidence 688998 4332 37999999887765551 1111111100034444 5777765532 3444444333 2211
Q ss_pred EEEEEccC-------------CccceEE--EeeCCcEEEEec-CCCCEEEEEeCCCCcEEEeee
Q 041631 285 KHLSVTLL-------------GVEEPLG--VWNNGGFFVQSD-SRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 285 ~~~~i~~~-------------~~~~p~~--~~~~g~i~~~~~-~~~~~l~~yd~~t~~~~~v~~ 332 (358)
.. +... .+..|.+ +..+|.|++... . .+++..+|+.++++..+.-
T Consensus 302 ~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 302 WF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-GYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-TCEEEEEETTTTEEEEEEE
T ss_pred EE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-CCEEEEEECCCCEEEEEeC
Confidence 11 1110 1344644 446788888754 3 7899999988888877654
No 123
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=49.85 E-value=35 Score=29.64 Aligned_cols=96 Identities=8% Similarity=0.097 Sum_probs=45.3
Q ss_pred EEEEEECCCceEEEecC-CCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCe-eeEEEEEccC-CccceEEEe
Q 041631 226 IIISFDMANEVFQEVQC-PDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERI-WSKHLSVTLL-GVEEPLGVW 301 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~~-P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~-W~~~~~i~~~-~~~~p~~~~ 301 (358)
.|..+|+.+..+..+.. ...... -..+... +|++.+.... +..+.||-++... |.....+... .-..-+.+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKI--VTCVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWS 109 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSC--EEEEEECTTTCCEEEEET--TSSEEEC------CCCCEEECCCCSSCEEEEECC
T ss_pred EEEEEEccCCceEEEEEEecCCce--EEEEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceeeeeEecccCCceEEEEEC
Confidence 57777887776554422 211110 0123333 5665555543 5789999998843 6666654322 112233444
Q ss_pred eCCcEEEEecCCCCEEEEEeCCCCc
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
.++..++.... ++.+..||+++++
T Consensus 110 ~~~~~l~~~~~-d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 110 PNEDKFAVGSG-ARVISVCYFEQEN 133 (377)
T ss_dssp TTSSCCEEEES-SSCEEECCC----
T ss_pred CCCCEEEEEec-CCeEEEEEECCcc
Confidence 45655544331 6789999988876
No 124
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=49.24 E-value=1.2e+02 Score=25.51 Aligned_cols=110 Identities=11% Similarity=0.046 Sum_probs=56.2
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
.+|.+|...... ..|..+|+.+.+. ..+..+..... ..+... +|+..++... ....+.+|-++.+.-...
T Consensus 9 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 9 AGHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPDKFGP---GTAMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp TTCEEEEEEETT----TEEEEEETTTTEEEEEEECSSCCSS---CEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCC----CeEEEEECCCCcEEEEEecCCCCCC---ceeEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEEE
Confidence 345555444333 3799999988765 34565541111 133333 5654444432 356788887765433222
Q ss_pred EEEccCC-----ccceEEEeeCCcEEEEecCC-----------CCEEEEEeCCCCc
Q 041631 287 LSVTLLG-----VEEPLGVWNNGGFFVQSDSR-----------PRRLLLYDPNTQE 326 (358)
Q Consensus 287 ~~i~~~~-----~~~p~~~~~~g~i~~~~~~~-----------~~~l~~yd~~t~~ 326 (358)
..+...+ ....+.+..+|+.++..... .+.+..||+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2221100 02235555666544443210 2689999998744
No 125
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=48.77 E-value=2e+02 Score=27.96 Aligned_cols=113 Identities=15% Similarity=0.232 Sum_probs=61.4
Q ss_pred CCeEEEEEeecCCCceEEEEEECCC--ceEEEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECC-CeeeEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMAN--EVFQEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKE-RIWSKH 286 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~--e~~~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~ 286 (358)
++.+|+..... .....|...|+.+ +.|+.+- |...... ..+...++.|.+.... .....||+++- +. ..
T Consensus 327 g~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l--~~~~~~~~~lv~~~~~--dg~~~l~~~~~~g~--~~ 398 (741)
T 1yr2_A 327 GDQLWFVSGDG-APLKKIVRVDLSGSTPRFDTVV-PESKDNL--ESVGIAGNRLFASYIH--DAKSQVLAFDLDGK--PA 398 (741)
T ss_dssp TTEEEEEECTT-CTTCEEEEEECSSSSCEEEEEE-CCCSSEE--EEEEEEBTEEEEEEEE--TTEEEEEEEETTSC--EE
T ss_pred CCEEEEEECCC-CCCCEEEEEeCCCCccccEEEe-cCCCCeE--EEEEEECCEEEEEEEE--CCEEEEEEEeCCCC--ce
Confidence 34577665432 2235799999988 5777653 3321111 1233347887776655 45677888763 32 23
Q ss_pred EEEccCCcc--ceEEEeeCC-cEEEEec--CCCCEEEEEeCCCCcEEEe
Q 041631 287 LSVTLLGVE--EPLGVWNNG-GFFVQSD--SRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 287 ~~i~~~~~~--~p~~~~~~g-~i~~~~~--~~~~~l~~yd~~t~~~~~v 330 (358)
..+...... .-+....++ .+++... .....++.||+++++.+.+
T Consensus 399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 334321111 122222344 4665533 1245799999999887665
No 126
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=47.86 E-value=1.4e+02 Score=25.85 Aligned_cols=67 Identities=9% Similarity=-0.038 Sum_probs=35.6
Q ss_pred CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCC-cEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNG-GFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g-~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+.+.+.... ...+.||-+.... ....+... .-..-+++..++ .++.... .++.+.+||+++++..+.
T Consensus 239 ~~~la~g~~--d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs-~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 239 DDTFACGDE--TGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASIS-EDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp TTEEEEEES--SSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEE-TTSCEEEECTTSCEEEEE
T ss_pred cceEEEeec--ccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEe-CCCEEEEEECCCCcEeEE
Confidence 455444433 5789999887621 12222211 111224444444 4554432 167899999998876554
No 127
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=47.62 E-value=1.2e+02 Score=25.18 Aligned_cols=199 Identities=12% Similarity=0.081 Sum_probs=93.2
Q ss_pred eecceEEEeecCCeeEEEecCccceecCCC-CCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGLRDRITLWNVATRDSRTLPN-YGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~-~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
+.+|-+++......+.|||..+++....-. ... .........+.+.|.. .+-++. .. ...+.
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~-~~l~~~--~~-------d~~i~-- 122 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC-----LNRDNYIRSCKLLPDG-CTLIVG--GE-------ASTLS-- 122 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC-----SCTTSBEEEEEECTTS-SEEEEE--ES-------SSEEE--
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeecccc-----cCCCCcEEEEEEcCCC-CEEEEE--cC-------CCcEE--
Confidence 345544444444445899988765321111 000 0011234455666633 332222 11 23456
Q ss_pred EEEecCCCCceecccccCeeeeecCCcc-eEEeCCeEEEEEeecCCCceEEEEEECCCceEE-EecCCCCccccccccee
Q 041631 178 TIYNLRTNSWRDLVCFKTIHYCIPHSHG-CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETLD 255 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~ 255 (358)
+|+.+++....... +......... ...-+|.....+...+ .|..+|+.+.+.. .+...... -..+.
T Consensus 123 -~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg----~v~~~d~~~~~~~~~~~~~~~~----i~~~~ 190 (337)
T 1gxr_A 123 -IWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDG----NIAVWDLHNQTLVRQFQGHTDG----ASCID 190 (337)
T ss_dssp -EEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSSC----EEEEE
T ss_pred -EEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCCCceeeeeecccCc----eEEEE
Confidence 89888876443321 0000000000 1122455444443332 5888999887543 33321111 01233
Q ss_pred EE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 256 LY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 256 ~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
.. +|...+.... ...+.+|-++...- ...+....-..-+.+..++..++.... ++.+..||+++++...+.
T Consensus 191 ~~~~~~~l~~~~~--dg~i~~~d~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 191 ISNDGTKLWTGGL--DNTVRSWDLREGRQ--LQQHDFTSQIFSLGYCPTGEWLAVGME-SSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp ECTTSSEEEEEET--TSEEEEEETTTTEE--EEEEECSSCEEEEEECTTSSEEEEEET-TSCEEEEETTSSCEEEEC
T ss_pred ECCCCCEEEEEec--CCcEEEEECCCCce--EeeecCCCceEEEEECCCCCEEEEEcC-CCcEEEEECCCCCeEEEc
Confidence 33 5655555543 57899998876322 222222211223444456665555432 678999999988766543
No 128
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=47.31 E-value=1.2e+02 Score=25.18 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=0.0
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeC
Q 041631 225 KIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNN 303 (358)
Q Consensus 225 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~ 303 (358)
..|..+|+.+.+...+..+....... .+... +|+..++. ...+.+|-++. ......+.......-+.+..+
T Consensus 219 ~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~----~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~s~d 290 (337)
T 1pby_B 219 TGLLTMDLETGEMAMREVRIMDVFYF--STAVNPAKTRAFGA----YNVLESFDLEK--NASIKRVPLPHSYYSVNVSTD 290 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEE--EEEECTTSSEEEEE----ESEEEEEETTT--TEEEEEEECSSCCCEEEECTT
T ss_pred cceEEEeCCCCCceEeecCCCCCcee--eEEECCCCCEEEEe----CCeEEEEECCC--CcCcceecCCCceeeEEECCC
Q ss_pred CcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 304 GGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 304 g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
|+.++.... ++.+..||+++++...
T Consensus 291 g~~l~~~~~-~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 291 GSTVWLGGA-LGDLAAYDAETLEKKG 315 (337)
T ss_dssp SCEEEEESB-SSEEEEEETTTCCEEE
T ss_pred CCEEEEEcC-CCcEEEEECcCCcEEE
No 129
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=46.74 E-value=1.4e+02 Score=25.64 Aligned_cols=125 Identities=14% Similarity=-0.014 Sum_probs=65.4
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.+||...... ..|..+|+....-+.+-. ..... ...|+.. +++|++.... ...+...-++.. -. .
T Consensus 133 ~g~ly~td~~~~---~~I~r~~~dG~~~~~~~~-~~l~~--Pnglavd~~~~~lY~aD~~--~~~I~~~d~dG~-~~--~ 201 (318)
T 3sov_A 133 SGFMYWTDWGEV---PKIERAGMDGSSRFIIIN-SEIYW--PNGLTLDYEEQKLYWADAK--LNFIHKSNLDGT-NR--Q 201 (318)
T ss_dssp GTEEEEEECSSS---CEEEEEETTSCSCEEEEC-SSCSC--EEEEEEETTTTEEEEEETT--TTEEEEEETTSC-SC--E
T ss_pred CCEEEEEecCCC---CEEEEEEcCCCCeEEEEE-CCCCC--ccEEEEeccCCEEEEEECC--CCEEEEEcCCCC-ce--E
Confidence 589999764322 479999987654333311 11111 1145544 6777776533 455555555431 11 1
Q ss_pred EEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcE-EEeeecC-ceeEEEEeeecc
Q 041631 288 SVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEM-RDLGLRS-FWFSVYNFKESL 346 (358)
Q Consensus 288 ~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~-~~v~~~~-~~~~~~~y~~sl 346 (358)
.+....+..|.++.- ++.+|.... ..+.+..+|..+++. +.+.... .+..+..|-++.
T Consensus 202 ~~~~~~~~~P~glav~~~~lywtd~-~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~ 262 (318)
T 3sov_A 202 AVVKGSLPHPFALTLFEDILYWTDW-STHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQR 262 (318)
T ss_dssp EEECSCCSCEEEEEEETTEEEEEET-TTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGG
T ss_pred EEecCCCCCceEEEEeCCEEEEEec-CCCeEEEEECCCCCceEEEeCCCCCCcEEEEecccc
Confidence 111123556766653 455665543 267899999966554 4443321 224455665544
No 130
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=46.42 E-value=1.3e+02 Score=25.35 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=32.9
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECC
Q 041631 225 KIIISFDMANEVFQEVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKE 280 (358)
Q Consensus 225 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~ 280 (358)
..|..||...+....+..|..........+..-+|+|.+.... ...+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~--~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF--HGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS--CSEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC--CCceEEEeccc
Confidence 4799999988888888887643211111344457888775533 45666665543
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=45.50 E-value=1.2e+02 Score=24.48 Aligned_cols=200 Identities=13% Similarity=0.019 Sum_probs=91.6
Q ss_pred eecceEEEeecCCeeEEEecCc-cceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGLRDRITLWNVAT-RDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
+-+|-.++......++++|..+ ++...+...... .....+.+.|.. .+- +... ... .....+.
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg-~~l-~~~~-~~~---~~~~~l~-- 113 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPDG-ALY-AISD-KVE---FGKSAIY-- 113 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--------CBCSCCEECTTS-SEE-EEEE-CTT---TSSCEEE--
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc--------ccccceEECCCC-CEE-EEEE-eCC---CCcceEE--
Confidence 3455444444444569999999 877666533210 111223344432 222 2221 111 0123333
Q ss_pred EEEecCCCCceecccccCeeeeecCCcceEEeCCe-EEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeE
Q 041631 178 TIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGL-CHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDL 256 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~ 256 (358)
+++..++.-+....... .... ...-+|. +++...... ...|..+|+.+.....+....... ..+..
T Consensus 114 -~~~~~~~~~~~~~~~~~-~~~~-----~~spdg~~l~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~ 180 (297)
T 2ojh_A 114 -LLPSTGGTPRLMTKNLP-SYWH-----GWSPDGKSFTYCGIRDQ--VFDIYSMDIDSGVETRLTHGEGRN----DGPDY 180 (297)
T ss_dssp -EEETTCCCCEECCSSSS-EEEE-----EECTTSSEEEEEEEETT--EEEEEEEETTTCCEEECCCSSSCE----EEEEE
T ss_pred -EEECCCCceEEeecCCC-ccce-----EECCCCCEEEEEECCCC--ceEEEEEECCCCcceEcccCCCcc----ccceE
Confidence 55555555444332111 1100 1222454 443333322 246777777776665543221110 12232
Q ss_pred E-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEEeeCCcEEE-EecC---------CCCEEEEEeC
Q 041631 257 Y-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWNNGGFFV-QSDS---------RPRRLLLYDP 322 (358)
Q Consensus 257 ~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~~g~i~~-~~~~---------~~~~l~~yd~ 322 (358)
. +|+..++... ....+.||.++. ... ..+... .....+.+..+|+.++ .... ....++.||+
T Consensus 181 s~dg~~l~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 181 SPDGRWIYFNSS-RTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp CTTSSEEEEEEC-TTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CCCCCEEEEEec-CCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 2 6665444432 245789999873 222 222211 1112344445665444 3321 0146999999
Q ss_pred CCCcEEEee
Q 041631 323 NTQEMRDLG 331 (358)
Q Consensus 323 ~t~~~~~v~ 331 (358)
++++.+.+.
T Consensus 257 ~~~~~~~~~ 265 (297)
T 2ojh_A 257 DGGNVETLF 265 (297)
T ss_dssp TSCSCEEEE
T ss_pred CCCCceeee
Confidence 998877664
No 132
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.09 E-value=2.3e+02 Score=27.67 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=62.8
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLS 288 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~ 288 (358)
+|.+ |++... ..+..||..+.+++.+..+ ......-..+.+. +|.|.+.+. ..+..+-.+...|.....
T Consensus 417 ~g~l-Wigt~~----~Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 417 EGNL-WFGTYL----GNISYYNTRLKKFQIIELE-KNELLDVRVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp TSCE-EEEETT----EEEEEECSSSCEEEECCST-TTCCCCEEEEEECTTSEEEEEET----TEEEEEESSSSSCCEEEC
T ss_pred CCCE-EEEecc----CCEEEEcCCCCcEEEeccC-CCCCCeEEEEEECCCCCEEEEEC----CceEEEeCCCCeEEeccc
Confidence 4555 455432 3799999999999887543 1111111134444 567665442 334443333356655443
Q ss_pred EccC----CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 289 VTLL----GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 289 i~~~----~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
.... ....-+....+|.|.+.+. .+.|+.||+++++++.+.
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWigt~--~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWIGTF--GGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEEEES--SSCEEEECTTCCEEEEEC
T ss_pred CcccccccceeEEEEEcCCCCEEEEEc--CCCEEEEeCCCCeEEEcc
Confidence 2211 1112233445788999886 567999999999888764
No 133
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=43.61 E-value=1.4e+02 Score=24.73 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=40.7
Q ss_pred CeEEEEEecCCCcEEEEEEECC-------CeeeEEEEEccC-CccceEEEeeC--CcEEEEecCCCCEEEEEeCCCCc
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKE-------RIWSKHLSVTLL-GVEEPLGVWNN--GGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~-------~~W~~~~~i~~~-~~~~p~~~~~~--g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
|.+.+.... +..+.||-++. ..|.....+... ....-+.+..+ +.+++.... ++.+..||+++++
T Consensus 71 ~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASASY--DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-DGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEET--TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-TCEEEEEECSSTT
T ss_pred CCEEEEEcC--CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-CCcEEEecCCChH
Confidence 666555544 57899999976 456666666433 22223444455 665555432 6789999988765
No 134
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=41.36 E-value=1.8e+02 Score=25.28 Aligned_cols=111 Identities=5% Similarity=-0.075 Sum_probs=58.5
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
.+|.+||..... ..|.++|+....-..+.. .... ....++.- +|.|++.... ....+...-++. .-.
T Consensus 126 ~~g~ly~~d~~~----~~I~~~~~dG~~~~~l~~-~~l~--~P~~iavdp~~g~ly~td~~-~~~~I~r~~~dG-~~~-- 194 (349)
T 3v64_C 126 VHDKLYWTDSGT----SRIEVANLDGAHRKVLLW-QSLE--KPRAIALHPMEGTIYWTDWG-NTPRIEASSMDG-SGR-- 194 (349)
T ss_dssp TTTEEEEEETTT----TEEEEEETTSCSCEEEEC-TTCS--CEEEEEEETTTTEEEEEECS-SSCEEEEEETTS-CSC--
T ss_pred CCCeEEEEcCCC----CeEEEEcCCCCceEEEEe-CCCC--CcceEEEecCcCeEEEeccC-CCCEEEEEeCCC-CCc--
Confidence 368999987644 379999998765443321 1111 11134444 5666665432 113333333332 111
Q ss_pred EEEccCCccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 287 LSVTLLGVEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
..+....+..|.++. .++.||+.... .+.+..+|+++...+.+.
T Consensus 195 ~~~~~~~~~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG~~~~~~~ 241 (349)
T 3v64_C 195 RIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVI 241 (349)
T ss_dssp EESCCSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEE
T ss_pred EEEEECCCCCcceEEEeCCCCEEEEEECC-CCEEEEEeCCCCceEEEE
Confidence 111112345565543 35677776542 568999998876655543
No 135
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.25 E-value=23 Score=23.34 Aligned_cols=19 Identities=26% Similarity=0.546 Sum_probs=14.3
Q ss_pred EEEEecCCCCEEEEEeCCCCc
Q 041631 306 FFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 306 i~~~~~~~~~~l~~yd~~t~~ 326 (358)
....+. ++++|+||..|++
T Consensus 23 ~~v~T~--dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTG--DERVFFYNPTTRL 41 (73)
T ss_dssp EEEEES--SSCEEEEETTTTE
T ss_pred EEEECC--CCCEEEecCcccc
Confidence 334455 7899999999876
No 136
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=41.03 E-value=10 Score=33.77 Aligned_cols=26 Identities=8% Similarity=-0.181 Sum_probs=16.2
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCce
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANEV 236 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~ 236 (358)
++..+|.+|.-...+ .|.++|..+.+
T Consensus 5 P~v~~~~v~~gs~dg-----~v~a~d~~tG~ 30 (369)
T 2hz6_A 5 VTLPETLLFVSTLDG-----SLHAVSKRTGS 30 (369)
T ss_dssp ---CTTEEEEEETTS-----EEEEEETTTCC
T ss_pred CeeeCCEEEEEcCCC-----EEEEEECCCCC
Confidence 566778888654332 69999987654
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=40.95 E-value=2.4e+02 Score=26.80 Aligned_cols=118 Identities=11% Similarity=0.050 Sum_probs=60.0
Q ss_pred CCe-EEEEEeecCCCceEEEEEECCCc-eEEEecCCCCcccc-cccceeE-E--CCeEEEEEecCCCcEEEEEEECC-Ce
Q 041631 210 DGL-CHWLWELEDSKHKIIISFDMANE-VFQEVQCPDIASSA-YMETLDL-Y--HDSLSLLFLNTTNNHYEIWVLKE-RI 282 (358)
Q Consensus 210 ~G~-lywl~~~~~~~~~~il~fD~~~e-~~~~i~~P~~~~~~-~~~~L~~-~--~g~L~~~~~~~~~~~l~IW~l~~-~~ 282 (358)
||. ++............|..+|+.+. ....+......... ....+.. - +|++.+.... .....||.++. +.
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~--~g~~~l~~~~~~~~ 345 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR--DGWNHLYLYDTTGR 345 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT--TSSCEEEEEETTSC
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc--CCccEEEEEECCCC
Confidence 665 55444333233457899999887 66554321111000 0001222 2 6775444432 45788999873 21
Q ss_pred eeEEEEEccC--CccceEEEeeCCc-EEEEecCC---CCEEEEEeCCCCcEEEee
Q 041631 283 WSKHLSVTLL--GVEEPLGVWNNGG-FFVQSDSR---PRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 283 W~~~~~i~~~--~~~~p~~~~~~g~-i~~~~~~~---~~~l~~yd~~t~~~~~v~ 331 (358)
+...+... .+...+.+..+|+ |++..... ...|+.+|+++++.+.+.
T Consensus 346 --~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 346 --LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp --EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC
T ss_pred --EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc
Confidence 22223221 2222345555664 55554321 137999999888877664
No 138
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=40.89 E-value=2.1e+02 Score=27.33 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=55.4
Q ss_pred EEEEEECCCceEEE-ecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeC
Q 041631 226 IIISFDMANEVFQE-VQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNN 303 (358)
Q Consensus 226 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~ 303 (358)
.|..+|+.+.+... +...... -..+... +|++.+.... +..+.||-+..+. +...+.......-+++..+
T Consensus 542 ~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~sg~~--Dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAGHTGY----VSTVAVSPDGSLCASGGK--DGVVLLWDLAEGK--KLYSLEANSVIHALCFSPN 613 (694)
T ss_dssp CEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET--TSBCEEEETTTTE--EEECCBCSSCEEEEEECSS
T ss_pred eEEEEECCCCcEEEEEcCCCCC----EEEEEEeCCCCEEEEEeC--CCeEEEEECCCCc--eEEEecCCCcEEEEEEcCC
Confidence 57788887765533 2211110 0123333 6776665544 6789999987632 2222222222334555667
Q ss_pred CcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 304 GGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 304 g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+.++.... ++.+..||+++++...
T Consensus 614 ~~~l~~~~--~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 614 RYWLCAAT--EHGIKIWDLESKSIVE 637 (694)
T ss_dssp SSEEEEEE--TTEEEEEETTTTEEEE
T ss_pred CcEEEEEc--CCCEEEEECCCCCChh
Confidence 87777776 6789999999887654
No 139
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=40.85 E-value=1.8e+02 Score=25.31 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=56.4
Q ss_pred eEEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEe
Q 041631 225 KIIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVW 301 (358)
Q Consensus 225 ~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~ 301 (358)
..|..+|+.+.+. ..+..+... ..+... +|+..++........+.||-+......+...+... .-..-+.+.
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQV-----TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSCE-----EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCcE-----EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 3688888877654 333322211 123333 56666655433468999999998666666655432 222234555
Q ss_pred eCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.+|..++.... ++.+..||+++++...
T Consensus 359 ~dg~~l~s~~~-dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 359 PDGRILSTAAS-DENLKFWRVYDGDHVK 385 (401)
T ss_dssp TTSSEEEEECT-TSEEEEEECCC-----
T ss_pred CCCCEEEEEeC-CCcEEEEECCCCcccc
Confidence 67776665442 6789999998876544
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=40.08 E-value=1.7e+02 Score=24.62 Aligned_cols=110 Identities=10% Similarity=-0.081 Sum_probs=57.3
Q ss_pred CCe-EEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 210 DGL-CHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 210 ~G~-lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
+|. +|....... ..|..+|+.+.+.. .++..... ...+... +|+..++... ...+.+|-++... ..
T Consensus 151 dg~~l~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~--~~~i~~~d~~~~~--~~ 219 (353)
T 3vgz_A 151 ATNTVYISGIGKE---SVIWVVDGGNIKLKTAIQNTGKM----STGLALDSEGKRLYTTNA--DGELITIDTADNK--IL 219 (353)
T ss_dssp TTTEEEEEEESSS---CEEEEEETTTTEEEEEECCCCTT----CCCCEEETTTTEEEEECT--TSEEEEEETTTTE--EE
T ss_pred CCCEEEEEecCCC---ceEEEEcCCCCceEEEecCCCCc----cceEEECCCCCEEEEEcC--CCeEEEEECCCCe--EE
Confidence 665 554432222 37999999887654 34422211 1133333 5554444433 4677777666522 22
Q ss_pred EEEcc--C-Cc--cceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 287 LSVTL--L-GV--EEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 287 ~~i~~--~-~~--~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
..+.. . +- ..-+.+..+|+.++......+.+..||+++++....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 220 SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 23322 1 11 122556667764444332257899999998886553
No 141
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=39.63 E-value=1.7e+02 Score=24.49 Aligned_cols=102 Identities=9% Similarity=0.114 Sum_probs=55.4
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccceeEE-CCe-EEEEEecC---CCcEEEEEEECCCeeeEEEEEccC--Cccce
Q 041631 225 KIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDS-LSLLFLNT---TNNHYEIWVLKERIWSKHLSVTLL--GVEEP 297 (358)
Q Consensus 225 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~-L~~~~~~~---~~~~l~IW~l~~~~W~~~~~i~~~--~~~~p 297 (358)
..|..+|..+.++..+. .... ...+... +|+ |++..... ....+.+|-++.........+... ....-
T Consensus 169 ~~v~~~d~~~g~~~~~~---~~~~--p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA---DLDH--PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp EEEEEECSSSCCCEEEE---EESS--EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CeEEEEcCCCCcEEEEe---cCCC--CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 57999999887776553 1111 1134434 565 44433221 024566666655332222222111 11223
Q ss_pred EEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeeecC
Q 041631 298 LGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGLRS 334 (358)
Q Consensus 298 ~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~~~ 334 (358)
+.+..+|.|++... +.|..||++++.+.++....
T Consensus 244 i~~d~~G~lwv~~~---~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 244 FCVDRGGWLWSSSG---TGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp EEECTTSCEEECCS---SEEEEECTTSCEEEEEECSS
T ss_pred EEECCCCCEEEecC---CcEEEECCCCCEEEEEECCC
Confidence 55566788777654 57999999888887776543
No 142
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=39.18 E-value=1.9e+02 Score=25.06 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=37.2
Q ss_pred EEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeee
Q 041631 273 YEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 273 l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~ 332 (358)
-.||+.+-.....+.++.... ..-+.+..+|+.++... .+.+.+||.++++++.+..
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n--~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD--GGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC--SSCEEEEECSSSSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC--CCeEEEEECCCCcceeeEE
Confidence 355555553445566665444 44566677888777665 4889999999995566644
No 143
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=38.65 E-value=1.8e+02 Score=24.58 Aligned_cols=59 Identities=8% Similarity=0.088 Sum_probs=34.1
Q ss_pred CcEEEEEEECCCeeeEEEEEccCC-ccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 270 NNHYEIWVLKERIWSKHLSVTLLG-VEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 270 ~~~l~IW~l~~~~W~~~~~i~~~~-~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+..+.||.+.+........+.... -..-+.+..++.++..... ++.+..||+++++...
T Consensus 57 D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~-D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 57 DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL-DAHIRLWDLENGKQIK 116 (321)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET-TSEEEEEETTTTEEEE
T ss_pred CCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCCEEE
Confidence 578999998775444444443221 1122334445655555432 6788999988776544
No 144
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=38.55 E-value=1.8e+02 Score=24.47 Aligned_cols=139 Identities=9% Similarity=0.018 Sum_probs=75.5
Q ss_pred cceeeEEEEEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCce-EEEecCCCCcccc
Q 041631 171 LHEFSLCTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEV-FQEVQCPDIASSA 249 (358)
Q Consensus 171 ~~~~e~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~ 249 (358)
...+. +++..++.=...-..+..+. .......++.+|.++...+ .+.++|..+.+ ...++.+ ...
T Consensus 43 ~s~v~---~iD~~tg~v~~~i~l~~~~f----geGi~~~g~~lyv~t~~~~----~v~viD~~t~~v~~~i~~g-~~~-- 108 (266)
T 2iwa_A 43 RSSVR---QVALQTGKVENIHKMDDSYF----GEGLTLLNEKLYQVVWLKN----IGFIYDRRTLSNIKNFTHQ-MKD-- 108 (266)
T ss_dssp TCEEE---EEETTTCCEEEEEECCTTCC----EEEEEEETTEEEEEETTCS----EEEEEETTTTEEEEEEECC-SSS--
T ss_pred CCEEE---EEECCCCCEEEEEecCCCcc----eEEEEEeCCEEEEEEecCC----EEEEEECCCCcEEEEEECC-CCC--
Confidence 34566 88888865222111011111 0112344568998876543 79999998754 4556655 111
Q ss_pred cccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC----CccceEEE-eeCCcEEEEecCCCCEEEEEeCCC
Q 041631 250 YMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL----GVEEPLGV-WNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 250 ~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~----~~~~p~~~-~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
+..|..-+++|.+ . + +.. .|++++-..-....+|... ++..|..+ +.+|+++..... .+.+...|++|
T Consensus 109 -g~glt~Dg~~l~v-s-~-gs~--~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~-~~~V~vID~~t 181 (266)
T 2iwa_A 109 -GWGLATDGKILYG-S-D-GTS--ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQ-TDCIARISAKD 181 (266)
T ss_dssp -CCEEEECSSSEEE-E-C-SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT-SSEEEEEETTT
T ss_pred -eEEEEECCCEEEE-E-C-CCC--eEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCC-CCeEEEEECCC
Confidence 1123333455554 3 2 233 5777776444445555432 23233332 237788877642 67999999999
Q ss_pred CcEEEe
Q 041631 325 QEMRDL 330 (358)
Q Consensus 325 ~~~~~v 330 (358)
+++...
T Consensus 182 g~V~~~ 187 (266)
T 2iwa_A 182 GTLLGW 187 (266)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 987653
No 145
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=38.47 E-value=1.9e+02 Score=24.92 Aligned_cols=65 Identities=8% Similarity=-0.010 Sum_probs=38.7
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeCC-cEEEEecCCCCEEEEEeCCCCcE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNNG-GFFVQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~g-~i~~~~~~~~~~l~~yd~~t~~~ 327 (358)
+|.+.+.... +..+.||-++.. .....+... ....-+.+..++ .+++.... ++.+..||+++.+.
T Consensus 274 ~~~~l~s~~~--dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 274 DEHLLLSSGR--DNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASF-DNKIEVQTLQNLTN 340 (416)
T ss_dssp CSSCEEEEES--SSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCS-SSEEEEEESCCCCC
T ss_pred CCCeEEEEeC--CCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEec-CCcEEEEEccCCCC
Confidence 5666555544 578999988763 233444322 222235555566 56665432 67899999987653
No 146
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=37.38 E-value=1.8e+02 Score=24.35 Aligned_cols=63 Identities=10% Similarity=0.065 Sum_probs=36.4
Q ss_pred CeEEEEEecCCCcEEEEEEECCC--eeeEEEEEccC---CccceEEEeeCCcEEEEecCCCCEEEEEeCCC
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKER--IWSKHLSVTLL---GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~--~W~~~~~i~~~---~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
|++.+.... ...+.||-++.+ ...+...+... ....-+.+..++.+++.... ++.+..||+.+
T Consensus 299 ~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ--VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD-DASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT--TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSEEEEEEC--
T ss_pred CcEEEEEec--CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC-CCEEEEEEecC
Confidence 666665543 678999999872 22233344332 11223444557776665442 67899999864
No 147
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=36.70 E-value=2.7e+02 Score=26.14 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=58.2
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEEC-CCc--eEEEecCCCCcccc-------cccceeEECCeEEEEEecCCCcEEEE
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDM-ANE--VFQEVQCPDIASSA-------YMETLDLYHDSLSLLFLNTTNNHYEI 275 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~-~~e--~~~~i~~P~~~~~~-------~~~~L~~~~g~L~~~~~~~~~~~l~I 275 (358)
++..+|.+|...... ..|.++|. .+. .|+. .++...... ....++..+|++++... ...+..
T Consensus 58 P~v~~g~vyv~~~~~----~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~a 129 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFP----NNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGHLLA 129 (571)
T ss_dssp CEEETTEEEEECSTT----TCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEE
T ss_pred cEEECCEEEEEeCCC----CEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CCEEEE
Confidence 678899999765412 25999998 654 4543 333211100 01134445776655432 233333
Q ss_pred EEECC--CeeeEEEEEccC--Cc-cceEEEeeCCcEEEEecC----CCCEEEEEeCCCCcEE
Q 041631 276 WVLKE--RIWSKHLSVTLL--GV-EEPLGVWNNGGFFVQSDS----RPRRLLLYDPNTQEMR 328 (358)
Q Consensus 276 W~l~~--~~W~~~~~i~~~--~~-~~p~~~~~~g~i~~~~~~----~~~~l~~yd~~t~~~~ 328 (358)
.-.+. ..|.....-... .+ ..|+. .++.+++.... ..+.++.||.+|++..
T Consensus 130 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 130 LDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 22222 456543211000 12 34544 25666665431 1368999999988755
No 148
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=34.11 E-value=2e+02 Score=23.86 Aligned_cols=29 Identities=7% Similarity=-0.034 Sum_probs=16.7
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCC
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCP 243 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P 243 (358)
+|.+|. .... ..|.+||...+.......+
T Consensus 147 ~g~l~v-gt~~----~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYV-GSND----NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEE-ECTT----SEEEEECTTSCEEEEEECS
T ss_pred CCEEEE-EcCC----CEEEEECCCCCEeEEEecC
Confidence 677654 4332 3799999984443344443
No 149
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=34.06 E-value=2e+02 Score=23.83 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=46.1
Q ss_pred EEEEEECCCceEE-EecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCe--eeEEEEEc---cC---Ccc
Q 041631 226 IIISFDMANEVFQ-EVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERI--WSKHLSVT---LL---GVE 295 (358)
Q Consensus 226 ~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~--W~~~~~i~---~~---~~~ 295 (358)
.|..+|+.+.+.. .+....... .+... ++.+.... . +..+.||-++... +....... .. ...
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~-----~~~~~~~~~~~~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIIN-----ALCFSPNRYWLCAA-T--GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEE-----EEEECSSSSEEEEE-E--TTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred eEEEEEeccCceeeeecCCceEE-----eeecCCCCceeecc-C--CCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 6888898876543 222222111 22223 34443333 3 4789999887621 11111000 00 111
Q ss_pred ceEEEeeCCcEEEEecCCCCEEEEEeCCCCc
Q 041631 296 EPLGVWNNGGFFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 296 ~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~ 326 (358)
.-+++..+|..++.... ++.+..||++|++
T Consensus 310 ~~l~~s~dg~~l~sgs~-Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYT-DNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSSEEEEEET-TSCEEEEEEEC--
T ss_pred EEEEECCCCCEEEEEeC-CCEEEEEeCCCcC
Confidence 23455567877776442 6789999999875
No 150
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=33.58 E-value=2e+02 Score=24.23 Aligned_cols=69 Identities=6% Similarity=-0.020 Sum_probs=37.5
Q ss_pred CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+|+..+.... +..+.||-+.+ ..+.....+... .-..-+.+..++.+++.... ++.+..||..++..+.
T Consensus 118 ~g~~las~s~--D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-D~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 118 DGYYLATCSR--DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY-DDTVRIWKDYDDDWEC 189 (330)
T ss_dssp TSCEEEEEET--TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET-TSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeC--CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC-CCeEEEEECCCCCeeE
Confidence 3444443433 57889998854 456555554432 11223344456666555432 5678888877664443
No 151
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=33.40 E-value=2.3e+02 Score=24.31 Aligned_cols=188 Identities=7% Similarity=-0.044 Sum_probs=0.0
Q ss_pred eecceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEE
Q 041631 99 PYDGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCT 178 (358)
Q Consensus 99 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~ 178 (358)
+.+|.++.......+.++|..+++....-... ......+.+.|... .+..... ...+.
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~---------~~~i~~~~~~~~~~---~l~~~~~-------d~~i~--- 272 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH---------HGPISVLEFNDTNK---LLLSASD-------DGTLR--- 272 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCC---------SSCEEEEEEETTTT---EEEEEET-------TSCEE---
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccC---------CCceEEEEECCCCC---EEEEEcC-------CCEEE---
Q ss_pred EEecCCCCceecccccCeeeeecCCcc-eEEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE
Q 041631 179 IYNLRTNSWRDLVCFKTIHYCIPHSHG-CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY 257 (358)
Q Consensus 179 vyss~~~~W~~~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~ 257 (358)
+|+.+++.-...-....-+. .. ...-+| ....+...+ .|..+|+.+.+............. .+...
T Consensus 273 i~d~~~~~~~~~~~~~~~~i-----~~~~~~~~~-~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~i~---~~~~s 339 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSI-----VSASWVGDD-KVISCSMDG----SVRLWSLKQNTLLALSIVDGVPIF---AGRIS 339 (425)
T ss_dssp EECSSSBSCSEEECCCSSCE-----EEEEEETTT-EEEEEETTS----EEEEEETTTTEEEEEEECTTCCEE---EEEEC
T ss_pred EEECCCCccceEecCCCccE-----EEEEECCCC-EEEEEeCCC----cEEEEECCCCcEeEecccCCccEE---EEEEc
Q ss_pred -CCeEEEEEecCCCcEEEEEEECC-C-----------------eeeEEEEEccC--C-ccceEEEeeCCcEEEEecCCCC
Q 041631 258 -HDSLSLLFLNTTNNHYEIWVLKE-R-----------------IWSKHLSVTLL--G-VEEPLGVWNNGGFFVQSDSRPR 315 (358)
Q Consensus 258 -~g~L~~~~~~~~~~~l~IW~l~~-~-----------------~W~~~~~i~~~--~-~~~p~~~~~~g~i~~~~~~~~~ 315 (358)
+|++.++... ...+.||-+.. . .+.....+... . ...-+.+..++..++.... ++
T Consensus 340 ~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg 416 (425)
T 1r5m_A 340 QDGQKYAVAFM--DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS-LQ 416 (425)
T ss_dssp TTSSEEEEEET--TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES-SS
T ss_pred CCCCEEEEEEC--CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec-Cc
Q ss_pred EEEEEeCCC
Q 041631 316 RLLLYDPNT 324 (358)
Q Consensus 316 ~l~~yd~~t 324 (358)
.+..||++.
T Consensus 417 ~i~iw~~~g 425 (425)
T 1r5m_A 417 EGSVVAIPG 425 (425)
T ss_dssp CCEEEECCC
T ss_pred eEEEEeecC
No 152
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=32.44 E-value=1.6e+02 Score=24.43 Aligned_cols=64 Identities=9% Similarity=0.145 Sum_probs=37.8
Q ss_pred CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeC--CcEEEEecCCCCEEEEEeCCCC
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNN--GGFFVQSDSRPRRLLLYDPNTQ 325 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~--g~i~~~~~~~~~~l~~yd~~t~ 325 (358)
|.+.+.... +.++.||-++.+.|.....+... ....-+.+..+ |.+++.... ++.+..||++++
T Consensus 67 g~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSY--DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-DGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEET--TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-TSEEEEEEBCSS
T ss_pred CCEEEEEcC--CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC-CCcEEEEEecCC
Confidence 555444443 67999999988777666555422 11223343333 555554332 678889998765
No 153
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=32.24 E-value=3.4e+02 Score=25.93 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=71.7
Q ss_pred EEecCCCCceecccccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCce---EEEecCCCCccccccccee
Q 041631 179 IYNLRTNSWRDLVCFKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEV---FQEVQCPDIASSAYMETLD 255 (358)
Q Consensus 179 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~L~ 255 (358)
+.+..++.|+....... .....+..+|.+|+.+.. ......|..+|+.+.. |+.+-.+...... ..+.
T Consensus 256 ~~~~~~~~~~~l~~~~~------~~~~~~~~~g~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l--~~~~ 326 (695)
T 2bkl_A 256 WKRPGEKDFRLLVKGVG------AKYEVHAWKDRFYVLTDE-GAPRQRVFEVDPAKPARASWKEIVPEDSSASL--LSVS 326 (695)
T ss_dssp EECTTCSSCEEEEECSS------CCEEEEEETTEEEEEECT-TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE--EEEE
T ss_pred EEcCCCCceEEeecCCC------ceEEEEecCCcEEEEECC-CCCCCEEEEEeCCCCCccCCeEEecCCCCCeE--EEEE
Confidence 44555567776643111 111144467776655432 2223689999997654 6655332211110 1233
Q ss_pred EECCeEEEEEecCCCcEEEEEEECC-CeeeEEEEEccCCc--cceEEEeeCC-cEEEEec--CCCCEEEEEeCCCCcEEE
Q 041631 256 LYHDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLLGV--EEPLGVWNNG-GFFVQSD--SRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 256 ~~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~--~~p~~~~~~g-~i~~~~~--~~~~~l~~yd~~t~~~~~ 329 (358)
..+|.|.+.... .....||+++- +. ....+..... ..-+....++ .+++... .....++.||+++++.+.
T Consensus 327 ~~~~~lv~~~~~--dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 327 IVGGHLSLEYLK--DATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp EETTEEEEEEEE--TTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EECCEEEEEEEE--CCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 348888776655 45778888763 22 2333332111 1112222344 4555433 123579999999988776
Q ss_pred ee
Q 041631 330 LG 331 (358)
Q Consensus 330 v~ 331 (358)
+.
T Consensus 403 l~ 404 (695)
T 2bkl_A 403 WA 404 (695)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 154
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.96 E-value=2.7e+02 Score=24.67 Aligned_cols=201 Identities=8% Similarity=0.020 Sum_probs=0.0
Q ss_pred ccEEeeeecceEEEeecCCeeEEEecCccc----eecCCCCCCCCCCCCCccc---------------------------
Q 041631 93 TGVLGGPYDGIYCIFGLRDRITLWNVATRD----SRTLPNYGPTCPPNTKVYK--------------------------- 141 (358)
Q Consensus 93 ~~~~~~s~~GLl~l~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~--------------------------- 141 (358)
...+.-+.+|-+++....+.+.|+|..|++ ....+... .
T Consensus 7 ~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDF----------DKIQESRNTTAKEQQGQSSENENENKKL 76 (450)
T ss_dssp CCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCcc----------ccccccccccchhhcccccccccccccc
Q ss_pred ---------------------------ceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecC--CCCceec--
Q 041631 142 ---------------------------TSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLR--TNSWRDL-- 190 (358)
Q Consensus 142 ---------------------------~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~--~~~W~~~-- 190 (358)
....+.+.|.....-++.-. .-.+. +|+.. ++.-...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~---------dg~v~---iwd~~~~~~~~~~~~~ 144 (450)
T 2vdu_B 77 KSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS---------DKSLL---VFDVDKTSKNVLKLRK 144 (450)
T ss_dssp -----------------------CCCCCEEEEEECTTSSEEEEEEGG---------GTEEE---EEEECSSSSSCEEEEE
T ss_pred ccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC---------CCeEE---EEECcCCCCceeeeee
Q ss_pred --cc-ccCeeeeecCCcceEEeCCeEEEEEeecCCCceEEEEEECCCceEEE-ecCCCCcccccccceeEE-C---CeEE
Q 041631 191 --VC-FKTIHYCIPHSHGCTYLDGLCHWLWELEDSKHKIIISFDMANEVFQE-VQCPDIASSAYMETLDLY-H---DSLS 262 (358)
Q Consensus 191 --~~-~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~L~~~-~---g~L~ 262 (358)
.. ...... ...-+|..-..+.... .|..+|+.+..... ...........-..+... + |++.
T Consensus 145 ~~~~~~~v~~~-------~~sp~~~~l~~~~~~g----~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 145 RFCFSKRPNAI-------SIAEDDTTVIIADKFG----DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp EEECSSCEEEE-------EECTTSSEEEEEETTS----EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE
T ss_pred cccCCCCceEE-------EEcCCCCEEEEEeCCC----cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEE
Q ss_pred EEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 263 LLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 263 ~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+.... +..+.||-+..+.-.............-+.+. ++.+++.... ++.+.+||+++++....
T Consensus 214 ~s~~~--d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~-d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 214 ITSDR--DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG-DDKIFAWDWKTGKNLST 277 (450)
T ss_dssp EEEET--TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEES-SSEEEEEETTTCCEEEE
T ss_pred EEEcC--CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeC-CCeEEEEECCCCcEeee
No 155
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=31.91 E-value=3.3e+02 Score=25.63 Aligned_cols=196 Identities=7% Similarity=-0.014 Sum_probs=96.0
Q ss_pred cceEEEeec-CCeeEEEecCcccee-cCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEE
Q 041631 101 DGIYCIFGL-RDRITLWNVATRDSR-TLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCT 178 (358)
Q Consensus 101 ~GLl~l~~~-~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~ 178 (358)
++++.+... .+.+.|.|+.|++.. .+|... ...++.++|.. .|-.|. . . .-.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-----------~p~~v~~SpDG-r~lyv~--~--~-----dg~V~--- 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-----------AVHISRLSASG-RYLFVI--G--R-----DGKVN--- 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS-----------CEEEEEECTTS-CEEEEE--E--T-----TSEEE---
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-----------CccceEECCCC-CEEEEE--c--C-----CCeEE---
Confidence 345544443 335699999998765 344221 12355666643 443332 1 1 22466
Q ss_pred EEecCCCCceecccccCeeeeecCCcce-EEe-----CCe-EEEEEeecCCCceEEEEEECCCceE-EEecCCCCccc--
Q 041631 179 IYNLRTNSWRDLVCFKTIHYCIPHSHGC-TYL-----DGL-CHWLWELEDSKHKIIISFDMANEVF-QEVQCPDIASS-- 248 (358)
Q Consensus 179 vyss~~~~W~~~~~~~~~~~~~~~~~~~-v~~-----~G~-lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~-- 248 (358)
+|+..+.+-+.... ++.+ ..+.. .+. ||. +|....... .|.++|..+.+- ..+++......
T Consensus 222 viD~~~~t~~~v~~---i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~----~v~ViD~~t~~~~~~i~~~~~~~~~~ 292 (567)
T 1qks_A 222 MIDLWMKEPTTVAE---IKIG--SEARSIETSKMEGWEDKYAIAGAYWPP----QYVIMDGETLEPKKIQSTRGMTYDEQ 292 (567)
T ss_dssp EEETTSSSCCEEEE---EECC--SEEEEEEECCSTTCTTTEEEEEEEETT----EEEEEETTTCCEEEEEECCEECTTTC
T ss_pred EEECCCCCCcEeEE---EecC--CCCceeEEccccCCCCCEEEEEEccCC----eEEEEECCCCcEEEEEeccccccccc
Confidence 88874222222221 1111 11122 233 674 665554443 788999877554 44554321100
Q ss_pred --cccc---ceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeC
Q 041631 249 --AYME---TLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDP 322 (358)
Q Consensus 249 --~~~~---~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~ 322 (358)
.... .+... ++...++... ...++.++-..+....++..|......+..++..+|+.++......+++.++|.
T Consensus 293 ~~~p~~rva~i~~s~~~~~~vv~~~-~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~ 371 (567)
T 1qks_A 293 EYHPEPRVAAILASHYRPEFIVNVK-ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDT 371 (567)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEET-TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCCceEEEEEcCCCCEEEEEec-CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEEC
Confidence 0010 12222 2333333332 234333333333334444445433344456666788777664433689999999
Q ss_pred CCCcEEEe
Q 041631 323 NTQEMRDL 330 (358)
Q Consensus 323 ~t~~~~~v 330 (358)
+++++...
T Consensus 372 ~t~kl~~~ 379 (567)
T 1qks_A 372 KEGKLVAI 379 (567)
T ss_dssp TTTEEEEE
T ss_pred CCCcEEEE
Confidence 99987764
No 156
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=31.63 E-value=2.3e+02 Score=23.69 Aligned_cols=206 Identities=10% Similarity=0.041 Sum_probs=100.2
Q ss_pred eecceEEEeec-CCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEE
Q 041631 99 PYDGIYCIFGL-RDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLC 177 (358)
Q Consensus 99 s~~GLl~l~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~ 177 (358)
+.+|-+.+... ...++++||.+++...+..... ....++.+++.. . +.... .... .....+.
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg-~--l~v~~-~~~~--~~~~~i~-- 115 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---------ANPAAIKIHKDG-R--LFVCY-LGDF--KSTGGIF-- 115 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---------SSEEEEEECTTS-C--EEEEE-CTTS--SSCCEEE--
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---------CCcceEEECCCC-c--EEEEe-CCCC--CCCceEE--
Confidence 34666655443 3356999999988766532110 123456666643 2 22111 1000 0012444
Q ss_pred EEEecCCCCceecccccCeeeeecCCcceEE--eCCeEEEEEeec--CCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 178 TIYNLRTNSWRDLVCFKTIHYCIPHSHGCTY--LDGLCHWLWELE--DSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 178 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
+|+..++.-+..-.... + ......+. -+|.+|...... ......|..+|..+.++..+.-. .. ....
T Consensus 116 -~~d~~~~~~~~~~~~~~-~---~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~--~~~~ 186 (333)
T 2dg1_A 116 -AATENGDNLQDIIEDLS-T---AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--IS--VANG 186 (333)
T ss_dssp -EECTTSCSCEEEECSSS-S---CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ES--SEEE
T ss_pred -EEeCCCCEEEEEEccCc-c---CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CC--cccc
Confidence 77777665442211000 0 01111222 357776544321 01124799999887766544210 00 0013
Q ss_pred eeEE-CCe-EEEEEecCCCcEEEEEEECC--CeeeEEE-EE--ccCCccce--EEEeeCCcEEEEecCCCCEEEEEeCCC
Q 041631 254 LDLY-HDS-LSLLFLNTTNNHYEIWVLKE--RIWSKHL-SV--TLLGVEEP--LGVWNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 254 L~~~-~g~-L~~~~~~~~~~~l~IW~l~~--~~W~~~~-~i--~~~~~~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
+... +|+ |++.... ...+.+|-++. ....... .+ .......| +++..+|.+++.... .+.|..||+++
T Consensus 187 i~~~~dg~~l~v~~~~--~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-~~~v~~~d~~g 263 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT--ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-QGRVLVFNKRG 263 (333)
T ss_dssp EEECTTSSEEEEEEGG--GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-TTEEEEECTTS
T ss_pred eEECCCCCEEEEEeCC--CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-CCEEEEECCCC
Confidence 3333 555 5554432 46788888853 2222111 11 11111223 555567888887641 46899999987
Q ss_pred CcEEEeeec
Q 041631 325 QEMRDLGLR 333 (358)
Q Consensus 325 ~~~~~v~~~ 333 (358)
+.++.+...
T Consensus 264 ~~~~~~~~~ 272 (333)
T 2dg1_A 264 YPIGQILIP 272 (333)
T ss_dssp CEEEEEECT
T ss_pred CEEEEEEcC
Confidence 777776543
No 157
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=31.42 E-value=2.6e+02 Score=24.21 Aligned_cols=97 Identities=11% Similarity=0.152 Sum_probs=53.2
Q ss_pred EEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeC
Q 041631 226 IIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNN 303 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~ 303 (358)
.|..+|+.+.+...+.... ... -..+.-. +|++.+.... +..+.||-++...= ...+... ....-+.+..+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h-~~~--v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAH-VSE--ITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSN--PRTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp CEEEECTTSCEEEEETTSS-SSC--EEEEEECTTSSEEEEEET--TSEEEEEETTTCCC--CEEEECCSSCEEEEEEETT
T ss_pred CEEEEeCCCcceeeecccc-cCc--cEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcC--ceEEcCCCCcEEEEEEcCC
Confidence 5888888877665432111 100 0123333 5665555543 57999999886221 1222211 11223445557
Q ss_pred CcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 304 GGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 304 g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+..++.... ++.+..||+++++....
T Consensus 193 ~~~l~s~~~-d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 193 GRNVLSASL-DGTIRLWECGTGTTIHT 218 (420)
T ss_dssp TTEEEEEET-TSCEEEEETTTTEEEEE
T ss_pred CCEEEEEcC-CCcEEEeECCCCceeEE
Confidence 766665432 67899999998876554
No 158
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=31.42 E-value=3.4e+02 Score=25.57 Aligned_cols=99 Identities=8% Similarity=0.039 Sum_probs=56.4
Q ss_pred eEEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEee
Q 041631 225 KIIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWN 302 (358)
Q Consensus 225 ~~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~ 302 (358)
..|..+|..+.+. ..++...... .+... +|+..++... ...+.+|-+....-..+.+|......+-+.+.+
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~~p~-----~v~~SpDGr~lyv~~~--dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGYAVH-----ISRLSASGRYLFVIGR--DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEE-----EEEECTTSCEEEEEET--TSEEEEEETTSSSCCEEEEEECCSEEEEEEECC
T ss_pred CeEEEEECCCCeEEEEEeCCCCcc-----ceEECCCCCEEEEEcC--CCeEEEEECCCCCCcEeEEEecCCCCceeEEcc
Confidence 4899999988654 4555433211 23333 6766555543 457888877421123444554322223456663
Q ss_pred ----CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 303 ----NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 303 ----~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+|+.++......+.+.++|.+|.+..+.
T Consensus 250 ~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~ 281 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 281 (567)
T ss_dssp STTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred ccCCCCCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 6755554332267899999888776653
No 159
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=30.70 E-value=3.6e+02 Score=25.74 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=102.9
Q ss_pred eeecceEEEeecCC-eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 98 GPYDGIYCIFGLRD-RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 98 ~s~~GLl~l~~~~~-~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
+..+|.|...+... ++..+++-.+....+-.... ....|+.+|...+. +.+. . . ....++
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~---------~~P~GlAvD~~~~~--LY~t--D-~----~~~~I~- 105 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL---------DYPEGMAVDWLGKN--LYWA--D-T----GTNRIE- 105 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTE--EEEE--E-T----TTTEEE-
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC---------CCcceEEEEeCCCE--EEEE--E-C----CCCEEE-
Confidence 44567776665443 34777776544333322221 12346777765543 2221 1 1 134566
Q ss_pred EEEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
++++.+..=+.... ..+ ..+.++.+ +|.|||...... ..|..+++.....+.+-- ... ....
T Consensus 106 --v~~~dG~~~~~l~~-~~l-----~~P~~iavdp~~G~lY~tD~g~~---~~I~r~~~dG~~~~~l~~--~~~--~P~G 170 (628)
T 4a0p_A 106 --VSKLDGQHRQVLVW-KDL-----DSPRALALDPAEGFMYWTEWGGK---PKIDRAAMDGSERTTLVP--NVG--RANG 170 (628)
T ss_dssp --EEETTSTTCEEEEC-SSC-----CCEEEEEEETTTTEEEEEECSSS---CEEEEEETTSCSCEEEEC--SCS--SEEE
T ss_pred --EEecCCCcEEEEEe-CCC-----CCcccEEEccCCCeEEEeCCCCC---CEEEEEeCCCCceEEEEC--CCC--Ccce
Confidence 88876543222211 111 12234443 599999765322 489999988765544421 111 1113
Q ss_pred eeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 254 LDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 254 L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
|+.- +++|+++... ...+..--++. .-.++ + ...+..|.++.- ++.+|..... .+.+...|..+++-..+
T Consensus 171 lalD~~~~~LY~aD~~--~~~I~~~d~dG-~~~~v--~-~~~l~~P~glav~~~~ly~tD~~-~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLD--TNLIESSNMLG-LNREV--I-ADDLPHPFGLTQYQDYIYWTDWS-RRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTS-CSCEE--E-EECCSCEEEEEEETTEEEEEETT-TTEEEEEETTTCCSCEE
T ss_pred EEEccccCEEEEEECC--CCEEEEEcCCC-CceEE--e-eccCCCceEEEEECCEEEEecCC-CCEEEEEECCCCCceEE
Confidence 4443 6788776643 44444444443 11121 1 113445666553 4566665432 67899999766654443
Q ss_pred eecCc--eeEEEEeeecc
Q 041631 331 GLRSF--WFSVYNFKESL 346 (358)
Q Consensus 331 ~~~~~--~~~~~~y~~sl 346 (358)
-..+. +..+..|-++.
T Consensus 244 l~~~~~~p~~i~v~~~~~ 261 (628)
T 4a0p_A 244 IQGHLDYVMDILVFHSSR 261 (628)
T ss_dssp EECSCCSCCEEEEECGGG
T ss_pred EecCCCCcceeeeeeecc
Confidence 22221 14455555543
No 160
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=30.39 E-value=2.6e+02 Score=23.96 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=36.0
Q ss_pred CcEEEEEEECCCe--eeEEEEEc-cCCccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 270 NNHYEIWVLKERI--WSKHLSVT-LLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 270 ~~~l~IW~l~~~~--W~~~~~i~-~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+..+.||-++.+. ........ ......-+++..+|..++.... ++.+..||+++++....
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~-d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK-DICIKVWDLAQQVVLSS 164 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEEEE
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEE
Confidence 5789999998732 22222221 1122234555567777766442 67899999998876554
No 161
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=30.08 E-value=3.8e+02 Score=25.80 Aligned_cols=97 Identities=7% Similarity=0.084 Sum_probs=47.4
Q ss_pred EEEEEECCCc-eEE-EecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEe
Q 041631 226 IIISFDMANE-VFQ-EVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVW 301 (358)
Q Consensus 226 ~il~fD~~~e-~~~-~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~ 301 (358)
.|..+|+.+. ... .+...... -..+.-. +|.+.+.... ...+.+|-+....-..........-..-+.+.
T Consensus 120 ~i~vw~~~~~~~~~~~~~~~~~~----v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 193 (814)
T 3mkq_A 120 TVKLWNWENNWALEQTFEGHEHF----VMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY 193 (814)
T ss_dssp EEEEEEGGGTSEEEEEEECCSSC----EEEEEEETTEEEEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCCCEEEEC
T ss_pred EEEEEECCCCceEEEEEcCCCCc----EEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcceeEEecCCCCCEEEEEEE
Confidence 6888888765 332 22211110 0023322 3444444433 57899999876221111111111111223333
Q ss_pred e--CCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 302 N--NGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 302 ~--~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
. ++..++.... ++.+..||+++++...
T Consensus 194 ~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 194 PLPDKPYMITASD-DLTIKIWDYQTKSCVA 222 (814)
T ss_dssp CSTTCCEEEEECT-TSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeC-CCEEEEEECCCCcEEE
Confidence 3 5655555432 6789999998877544
No 162
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=29.97 E-value=1.8e+02 Score=25.53 Aligned_cols=28 Identities=7% Similarity=-0.045 Sum_probs=21.0
Q ss_pred eCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
.+|.+|+-.. +++++..|++|++..-..
T Consensus 110 ~~g~Vy~Gs~--~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 110 EDEKVYTGSM--RTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CCEEEEECEE--EEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEec--CCEEEEEECCCCcEEEEE
Confidence 4566666666 678999999998877654
No 163
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=29.39 E-value=2.6e+02 Score=23.63 Aligned_cols=96 Identities=13% Similarity=-0.015 Sum_probs=51.4
Q ss_pred EEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC-CccceEEE
Q 041631 226 IIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL-GVEEPLGV 300 (358)
Q Consensus 226 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~-~~~~p~~~ 300 (358)
.|..+|+.+.+. ..++...... ..+... +|++.+.... +..+.||-+.. ........+... .....+.+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWV----MTCAYAPSGNYVACGGL--DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCE----EEEEECTTSSEEEEEET--TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccE----EEEEECCCCCEEEEEeC--CCeEEEEECccCCCcceeEEEecCCCccEEEEEE
Confidence 577777766543 3333222110 022222 5555554443 57899999876 333333333222 22223444
Q ss_pred eeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 301 WNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 301 ~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.+++.++.... ++.+..||+++++...
T Consensus 152 ~~~~~l~s~s~--d~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 152 LDDNQIVTSSG--DTTCALWDIETGQQTT 178 (340)
T ss_dssp EETTEEEEEET--TSCEEEEETTTTEEEE
T ss_pred CCCCcEEEEEC--CCcEEEEECCCCcEEE
Confidence 46677665555 7889999998876544
No 164
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=29.35 E-value=2.3e+02 Score=23.11 Aligned_cols=72 Identities=10% Similarity=0.067 Sum_probs=35.8
Q ss_pred CCeEEEEEecCCCcEEEEEEECC--CeeeEEEEEccC--CccceEEEe-eCCcEEEE-ecCCCCEEEEEeCCCCcEEEee
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKE--RIWSKHLSVTLL--GVEEPLGVW-NNGGFFVQ-SDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~--~~~~p~~~~-~~g~i~~~-~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
+|++.+.... +..+.||-+.. ............ .+. .+... .++.++.. .....+.+..||.++.+.....
T Consensus 161 ~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 161 DGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVK-AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp TSSEEEEEET--TSCEEEEESSCBTTBSCCSEEECCCCSCEE-EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEec--CcceeEEECCCCcccccceeeecccCCceE-EEEecCCCCcEEEEEecCCCCEEEEEecccccccccc
Confidence 5555544443 57899998876 222222221111 111 12222 23444433 3333567888888887766654
Q ss_pred e
Q 041631 332 L 332 (358)
Q Consensus 332 ~ 332 (358)
.
T Consensus 238 ~ 238 (318)
T 4ggc_A 238 D 238 (318)
T ss_dssp E
T ss_pred c
Confidence 4
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=29.22 E-value=2.7e+02 Score=23.83 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=59.1
Q ss_pred eCCeEEEEEeecCCCceEEEEEECC-CceEEE---ecCCC-CcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC--
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMA-NEVFQE---VQCPD-IASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-- 280 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~-~e~~~~---i~~P~-~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-- 280 (358)
-+|...+.+..+. ..|..||+. +.+... +..|. ... ...+... +|+..++... ....+.+|.++.
T Consensus 154 pdG~~l~~~~~~~---~~v~~~~~~~~g~~~~~~~~~~~~~g~~---p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 154 PTETYLYSADLTA---NKLWTHRKLASGEVELVGSVDAPDPGDH---PRWVAMHPTGNYLYALME-AGNRICEYVIDPAT 226 (365)
T ss_dssp TTSSEEEEEETTT---TEEEEEEECTTSCEEEEEEEECSSTTCC---EEEEEECTTSSEEEEEET-TTTEEEEEEECTTT
T ss_pred CCCCEEEEEcCCC---CEEEEEEECCCCCEEEeeeEecCCCCCC---CCEeEECCCCCEEEEEEC-CCCeEEEEEEeCCC
Confidence 3675333433222 378889987 665543 33332 211 1133433 6765444432 357899999874
Q ss_pred CeeeE-EEEEccC--Cc------------cceEE-EeeCCcEEEEecCCCC-----EEEEEeCC-CCcEEEe
Q 041631 281 RIWSK-HLSVTLL--GV------------EEPLG-VWNNGGFFVQSDSRPR-----RLLLYDPN-TQEMRDL 330 (358)
Q Consensus 281 ~~W~~-~~~i~~~--~~------------~~p~~-~~~~g~i~~~~~~~~~-----~l~~yd~~-t~~~~~v 330 (358)
+.... ...+... .. ..-+. +..+|+.++......+ .+..||++ +++++.+
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe
Confidence 44332 1223322 11 12245 5578865544321023 79999985 6777753
No 166
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=28.82 E-value=2.8e+02 Score=23.91 Aligned_cols=70 Identities=9% Similarity=0.029 Sum_probs=39.7
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC--CccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCc--EEEeee
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL--GVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQE--MRDLGL 332 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~--~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~--~~~v~~ 332 (358)
+|++.+.... ...+.||-+.... ....+... ....-+.+..++. +++.... ++.+..||+++++ +..+..
T Consensus 258 ~~~~l~~~~~--dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~-dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAGHV--SGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TTEEEEEEET--TSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTCTTSCSEEEEE
T ss_pred CCCEEEEEcC--CCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeC-CCeEEEEEcCCCcCchhhhhc
Confidence 5666655544 5689999887622 22222211 1122344455665 5555432 6799999998864 444443
No 167
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=28.81 E-value=1.1e+02 Score=22.32 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=27.1
Q ss_pred eEEEecCcc-ceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEE
Q 041631 113 ITLWNVATR-DSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIY 161 (358)
Q Consensus 113 ~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 161 (358)
+++.||.|+ +|. |.... ...+.+.+|+..+.|.|+.+.
T Consensus 13 V~~~D~~tk~~W~--p~g~~---------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 13 VFQIDPNTKKNWV--PTSKH---------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEECTTTSCSEE--ESCSS---------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCCceE--eCCCC---------ceEEEEEEcCCCCEEEEEEcc
Confidence 588899996 885 43321 145667889988899999854
No 168
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=28.81 E-value=2e+02 Score=27.13 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=37.9
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCcEEEEecCCCCEEEEEeCCC
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNT 324 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t 324 (358)
+|++.+.... +.++.||-++..............-..-+++..+|..+..... ++.+..||.++
T Consensus 459 dg~~lasgs~--D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~-d~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQ--DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ-SRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEET--TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSCEEEEEGGG
T ss_pred CCCEEEEeCC--CCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcC-CCCEEEEEcCC
Confidence 4544444433 5789999998755543333222222234566677877766442 66788898876
No 169
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=28.47 E-value=2.6e+02 Score=23.31 Aligned_cols=105 Identities=9% Similarity=0.012 Sum_probs=53.5
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEec-CCCCcccccccceeEE----CCeEEEEEecCCCcEEEEEEECC---
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQ-CPDIASSAYMETLDLY----HDSLSLLFLNTTNNHYEIWVLKE--- 280 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~L~~~----~g~L~~~~~~~~~~~l~IW~l~~--- 280 (358)
-+|.+...+... ..|..+|+.+.+..... .+.... .+... +|...++... ...+.||-+..
T Consensus 178 ~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~v~-----~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 178 QEERVVCAGYDN----GDIKLFDLRNMALRWETNIKNGVC-----SLEFDRKDISMNKLVATSL--EGKFHVFDMRTQHP 246 (357)
T ss_dssp -CCCEEEEEETT----SEEEEEETTTTEEEEEEECSSCEE-----EEEESCSSSSCCEEEEEES--TTEEEEEEEEEEET
T ss_pred CCCCEEEEEccC----CeEEEEECccCceeeecCCCCceE-----EEEcCCCCCCCCEEEEECC--CCeEEEEeCcCCCc
Confidence 355544444333 37899999887754331 111110 22222 4555555543 57899999876
Q ss_pred -CeeeEEEEEccC-CccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCc
Q 041631 281 -RIWSKHLSVTLL-GVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQE 326 (358)
Q Consensus 281 -~~W~~~~~i~~~-~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~ 326 (358)
...... .+... ....-+.+..++. +++.... ++.+..||+++..
T Consensus 247 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 247 TKGFASV-SEKAHKSTVWQVRHLPQNRELFLTAGG-AGGLHLWKYEYPI 293 (357)
T ss_dssp TTEEEEE-EEECCSSCEEEEEEETTEEEEEEEEET-TSEEEEEEEECCS
T ss_pred ccceeee-ccCCCcCCEEEEEECCCCCcEEEEEeC-CCcEEEeecCCCc
Confidence 222111 11111 1122344555665 4444332 6789999987643
No 170
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=28.46 E-value=91 Score=22.37 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=28.0
Q ss_pred eEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEE
Q 041631 113 ITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIY 161 (358)
Q Consensus 113 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 161 (358)
+++.+|.|++|. |.... .....+.+.+|+..+.|+|+...
T Consensus 13 V~~~d~~~~~W~--p~~~~-------~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 13 VMVYDDANKKWV--PAGGS-------TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEETTTTEEE--EGGGC-------CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCceE--ECCCC-------CCceEEEEEEECCCCEEEEEEEE
Confidence 488999999764 43320 01345778889988999999764
No 171
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=28.37 E-value=3.1e+02 Score=24.15 Aligned_cols=111 Identities=14% Similarity=0.073 Sum_probs=58.1
Q ss_pred eEEeCCeEEEEEeecCCCceEEEEEECCCceEE-EecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeee
Q 041631 206 CTYLDGLCHWLWELEDSKHKIIISFDMANEVFQ-EVQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWS 284 (358)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~ 284 (358)
++..+|.....+..++ .|..+|+.+.+.. .+...... ..-...+|...+.... +..+.||-+..+.
T Consensus 284 ~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~-----v~~~~~~~~~l~~~~~--dg~i~vwd~~~~~-- 350 (445)
T 2ovr_B 284 SLQFDGIHVVSGSLDT----SIRVWDVETGNCIHTLTGHQSL-----TSGMELKDNILVSGNA--DSTVKIWDIKTGQ-- 350 (445)
T ss_dssp EEEECSSEEEEEETTS----CEEEEETTTCCEEEEECCCCSC-----EEEEEEETTEEEEEET--TSCEEEEETTTCC--
T ss_pred EEEECCCEEEEEeCCC----eEEEEECCCCCEEEEEcCCccc-----EEEEEEeCCEEEEEeC--CCeEEEEECCCCc--
Confidence 4555776554444333 6889999876543 23221110 0112234554444433 5789999887632
Q ss_pred EEEEEccC-Cc-cceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 285 KHLSVTLL-GV-EEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 285 ~~~~i~~~-~~-~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
....+... .. ....++.-++..++.... ++.+..||+++++....
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~ 397 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQFNKNFVITSSD-DGTVKLWDLKTGEFIRN 397 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEECSSEEEEEET-TSEEEEEETTTCCEEEE
T ss_pred EEEEEccCCCCCCCEEEEEECCCEEEEEeC-CCeEEEEECCCCceeee
Confidence 33334321 11 112222224555554332 77899999998876543
No 172
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=27.46 E-value=2.3e+02 Score=23.70 Aligned_cols=69 Identities=6% Similarity=0.023 Sum_probs=38.3
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEee--CCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWN--NGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~--~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+|++.+.... +..+.||-++.+.......+... .-..-+.+.. ++.+++.... ++.+..||+++++++.
T Consensus 24 ~g~~lasgs~--D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~-D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 24 YGTRLATCSS--DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY-DRKVIIWREENGTWEK 95 (316)
T ss_dssp GGCEEEEEET--TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET-TSCEEEECCSSSCCCE
T ss_pred CCCEEEEEeC--CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC-CCEEEEEECCCCcceE
Confidence 5555444443 67999999987544444444322 1111233322 3555554332 6789999998875433
No 173
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=26.81 E-value=3.2e+02 Score=23.81 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=54.4
Q ss_pred EEEEEECCCceE-----EEecCCCCcccc--------cccceeEE-CCeEEEEEecCCCcEEEEEEECC-CeeeEEEEEc
Q 041631 226 IIISFDMANEVF-----QEVQCPDIASSA--------YMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVT 290 (358)
Q Consensus 226 ~il~fD~~~e~~-----~~i~~P~~~~~~--------~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~ 290 (358)
.|..+|+++.+. ..+..+...... .-..+... +|++.+.... ..+.||-+.. +.-.......
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEEEEEETTCCSSCSCCEESC
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeEEEEeCCCCccccceeecc
Confidence 588889887663 445443321000 00023333 5666554432 7999999875 3222222211
Q ss_pred cCCcc---------------ceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 291 LLGVE---------------EPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 291 ~~~~~---------------~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
. .+. ..+++..++..++.... ++.+..||+++++...+.
T Consensus 327 ~-~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~-dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 327 E-YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY-NNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp G-GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS-TTEEEEEETTTCCEEEEE
T ss_pred c-cccccccccccccccccceEEEECCCCCEEEEecc-CCEEEEEEcCCCcceeee
Confidence 0 100 01566667776655432 789999999999876654
No 174
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=26.62 E-value=2.7e+02 Score=23.02 Aligned_cols=72 Identities=11% Similarity=0.008 Sum_probs=41.7
Q ss_pred CCeEEEEEecCCCcEEEEEEECC-CeeeEEEE-EccCCccceEEEeeCCc-EEEEecCCCCEEEEEeC-CCCcEEEeee
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKE-RIWSKHLS-VTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDP-NTQEMRDLGL 332 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~-i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~-~t~~~~~v~~ 332 (358)
+|.+.++... ...+.||-++. ........ .....-..-+.+..++. .++.... ++.+..||+ ++++...+..
T Consensus 22 ~~~~l~~~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 22 SKSLLLITSW--DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV-QGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp GGTEEEEEET--TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET-TSCEEEECSSSSSSEEECBS
T ss_pred CCCEEEEEcC--CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC-CCeEEEEEeccCCceEeccc
Confidence 4555454443 57899999987 31211222 22222222345556777 5554332 678999999 9988866654
No 175
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=26.59 E-value=3e+02 Score=23.43 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=39.9
Q ss_pred eEEe--CCeEEEEEeec-CCCceEEEEEECCCce-EEEecCCCCcccc--cccceeEE--CCeEEEEEecC-CCcEEEEE
Q 041631 206 CTYL--DGLCHWLWELE-DSKHKIIISFDMANEV-FQEVQCPDIASSA--YMETLDLY--HDSLSLLFLNT-TNNHYEIW 276 (358)
Q Consensus 206 ~v~~--~G~lywl~~~~-~~~~~~il~fD~~~e~-~~~i~~P~~~~~~--~~~~L~~~--~g~L~~~~~~~-~~~~l~IW 276 (358)
++.+ +|.|||..... ......|+.||+.+.+ ...+.+|...... ....++.. +|.+++..... ....+.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 5555 47898876431 0001379999999877 5677776432211 11234444 35554443210 24566666
Q ss_pred EECC
Q 041631 277 VLKE 280 (358)
Q Consensus 277 ~l~~ 280 (358)
-++.
T Consensus 151 d~~~ 154 (343)
T 2qe8_A 151 DLQT 154 (343)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 6554
No 176
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.57 E-value=4.8e+02 Score=25.81 Aligned_cols=111 Identities=11% Similarity=0.004 Sum_probs=62.0
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHL 287 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 287 (358)
+|.|||..... ..|.++|+.......+-... .. ....|++- +|.|++.... ....|.+--|+. .- +.
T Consensus 482 ~~~LY~tD~~~----~~I~v~~ldG~~~~~l~~~~-l~--~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG-~~--~~ 550 (791)
T 3m0c_C 482 HSNIYWTDSVL----GTVSVADTKGVKRKTLFREN-GS--KPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG-VD--IY 550 (791)
T ss_dssp TTEEEEEETTT----TEEEEEETTSSSEEEEEECT-TC--CEEEEEEETTTTEEEEEECS-SSCEEEEEETTS-CC--EE
T ss_pred CCcEEEEecCC----CeEEEEeCCCCeEEEEEeCC-CC--CcceEEEecCCCCEEEecCC-CCCeEEEEecCC-Cc--eE
Confidence 46999987544 38999999876655442111 11 11145553 5777765532 123443333333 11 11
Q ss_pred EEccCCccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEeee
Q 041631 288 SVTLLGVEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 288 ~i~~~~~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~ 332 (358)
.+....+..|.++. .++.||+.... .+.|..+|+++...+.+..
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~-~~~I~~~d~dG~~~~~v~~ 597 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILE 597 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCC-CCcEEEEecCCCceEEEec
Confidence 22222455676654 35677776542 5689999998877777654
No 177
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=26.50 E-value=2.8e+02 Score=23.07 Aligned_cols=66 Identities=14% Similarity=-0.016 Sum_probs=37.4
Q ss_pred CCe-EEEEEecCCCcEEEEEEECC-----------------CeeeEEEEEccC-CccceEEEeeCCcEEEEecCCCCEEE
Q 041631 258 HDS-LSLLFLNTTNNHYEIWVLKE-----------------RIWSKHLSVTLL-GVEEPLGVWNNGGFFVQSDSRPRRLL 318 (358)
Q Consensus 258 ~g~-L~~~~~~~~~~~l~IW~l~~-----------------~~W~~~~~i~~~-~~~~p~~~~~~g~i~~~~~~~~~~l~ 318 (358)
+|+ +.+.... +..+.||-+.. +.+.....+... .-..-+.+..++..++.....++.+.
T Consensus 270 ~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAGG--AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEET--TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEeC--CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 455 3443333 57999999975 134555555432 11223455567766653221278999
Q ss_pred EEeCCCC
Q 041631 319 LYDPNTQ 325 (358)
Q Consensus 319 ~yd~~t~ 325 (358)
.||+++.
T Consensus 348 iw~~~~~ 354 (357)
T 3i2n_A 348 VLIVTKL 354 (357)
T ss_dssp EEEECC-
T ss_pred EEECCCc
Confidence 9998764
No 178
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=26.29 E-value=3.6e+02 Score=24.31 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=45.4
Q ss_pred CCeEEEEEecCC-----CcEEEEEEECCCeeeEEEEEccCCccceEEEeeCCc-EEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 258 HDSLSLLFLNTT-----NNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNGG-FFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 258 ~g~L~~~~~~~~-----~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+++|++...... ...=.||+.+-..+..+.+|.......-+.+..+|+ .++.....++.|.++|.+|.+..+-
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 356666653211 124578999887777777775432222344556776 5555432268999999999887654
No 179
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=25.61 E-value=4.7e+02 Score=25.43 Aligned_cols=111 Identities=9% Similarity=0.118 Sum_probs=56.7
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCC-cccccc---cceeEE-CCeEEEEEecCCCcEEEEEEECCCeee
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDI-ASSAYM---ETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWS 284 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~-~~~~~~---~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~ 284 (358)
+|. .|++... .|..||..+.++..+..... ...-.. ..+.+- +|.|-+-+.. ..+..+-.+...+.
T Consensus 273 ~g~-lWigt~~-----Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~---~Gl~~~~~~~~~~~ 343 (795)
T 4a2l_A 273 QNR-LWIGTFN-----DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYF---GGLNYYHPIRNRFK 343 (795)
T ss_dssp TSC-EEEEESS-----CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESS---SCEEEECGGGGSSE
T ss_pred CCC-EEEEeCC-----hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECC---CCeEEeCCCcccce
Confidence 355 4566543 48999999999988754221 111000 123332 4555443321 22333322222232
Q ss_pred EEEEEcc-CCc----cceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 285 KHLSVTL-LGV----EEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 285 ~~~~i~~-~~~----~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
....... ..+ ..-+...++|.|.+-+. .+.|..||.++++++.+.
T Consensus 344 ~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~--~~Gl~~~~~~~~~~~~~~ 393 (795)
T 4a2l_A 344 NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTN--DGGLNLYNPITQRFTSYT 393 (795)
T ss_dssp EECCCTTSSSCSCSSEEEEEECTTSCEEEEES--SSCEEEECTTTCCEEEEC
T ss_pred EEcCCCCCCCCCCCeeEEEEECCCCCEEEEEC--CCCeEEEcCCCCcEEEEe
Confidence 2211110 011 12233345688998877 668999999998887764
No 180
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=25.36 E-value=1.9e+02 Score=25.60 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=30.6
Q ss_pred ccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEee-ecCce
Q 041631 294 VEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLG-LRSFW 336 (358)
Q Consensus 294 ~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~-~~~~~ 336 (358)
...|+++. +-|.|++.+. .+-++.||++|++.--.. +...+
T Consensus 259 ~DFPVamqvs~kygviyviTK--~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITK--YGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEET--TSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCceEEEEecccCCEEEEEeC--CcEEEEEEcccCcEEEEeccCCCc
Confidence 35677775 4688888888 789999999999876653 44443
No 181
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=25.05 E-value=2.9e+02 Score=22.78 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=53.2
Q ss_pred EEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEeeCC
Q 041631 226 IIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWNNG 304 (358)
Q Consensus 226 ~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~~g 304 (358)
.|..+|+.+.+.......... .-..+... +|++.+.... +..+.||-+... .....+........+.+..++
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~s~--Dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTG---YLNTVTVSPDGSLCASGGK--DGQAMLWDLNEG--KHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEET--TCEEEEEETTTT--EEEEEEECSSCEEEEEECSSS
T ss_pred EEEEEECCCCceeeEecCCCC---cEEEEEECCCCCEEEEEeC--CCeEEEEEeccC--ceeeeecCCceEEeeecCCCC
Confidence 577788887765432211100 00023333 5666655544 578999987752 233333322222234444567
Q ss_pred cEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 305 GFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 305 ~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.++.... ++.+..||++++....
T Consensus 269 ~~~~~~~--d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 269 YWLCAAT--GPSIKIWDLEGKIIVD 291 (340)
T ss_dssp SEEEEEE--TTEEEEEETTTTEEEE
T ss_pred ceeeccC--CCEEEEEECCCCeEEE
Confidence 7777766 7899999998876543
No 182
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=24.95 E-value=3.1e+02 Score=23.02 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=53.1
Q ss_pred EEEEEECCCceEE-EecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEee
Q 041631 226 IIISFDMANEVFQ-EVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWN 302 (358)
Q Consensus 226 ~il~fD~~~e~~~-~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~ 302 (358)
.|..+|+.+.+.. .+...... -..+... +|++.+.... +..+.||-+.... ....+... ....-+.+..
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~----v~~l~~spd~~~l~s~s~--dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMP----IRSLTFSPDSQLLVTASD--DGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSC----CCEEEECTTSCEEEEECT--TSCEEEEETTTCC--EEEEECCCSSCEEEEEECT
T ss_pred eEEEEECCCCcEEEEEcccCCc----eeEEEEcCCCCEEEEEcC--CCeEEEEECCCcc--eeEEEcCCCCceEEEEECC
Confidence 5888898877643 33321110 0123333 5665554433 5789999887632 22233221 1122344555
Q ss_pred CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 303 NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 303 ~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
++..++.... ++.+..||+++++....
T Consensus 259 ~~~~l~s~s~-D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 259 DDTHFVSSSS-DKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp TSSEEEEEET-TSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeC-CCcEEEEeCCCCEEEEE
Confidence 7766665432 67899999998775543
No 183
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=24.93 E-value=4.9e+02 Score=25.33 Aligned_cols=118 Identities=8% Similarity=0.097 Sum_probs=59.1
Q ss_pred CCeEEEEEeecCCCceEEEEEECCC-ceEEE-ecCCCCcccccccceeEECCeEEEEEecCCCcEEEEEEECC----Cee
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMAN-EVFQE-VQCPDIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKE----RIW 283 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~-e~~~~-i~~P~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~----~~W 283 (358)
++.+|+++.........|+..|+.+ +.|+. + +|..... .-..+...++.|.+.... .....||+++- ..|
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~l-i~~~~~~-~l~~~~~~~~~lv~~~~~--~g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVL-VDHSEDV-FMESIAVRSNYLVVAGRR--AGLTRIWTMMADSQDGVF 405 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEE-ECCCSSE-EEEEEEECSSEEEEEEEE--TTEEEEEEEECCTTTSCC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeE-ECCCCCc-EEEEEEEECCEEEEEEEe--CCEEEEEEEecccccccc
Confidence 5678888765422346899999986 56654 3 1221110 001223336777666655 34556666541 112
Q ss_pred e--E-EEEEccCCccceEEE------e-eCCcEEEEec--CCCCEEEEEeCCCCcEEEee
Q 041631 284 S--K-HLSVTLLGVEEPLGV------W-NNGGFFVQSD--SRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 284 ~--~-~~~i~~~~~~~p~~~------~-~~g~i~~~~~--~~~~~l~~yd~~t~~~~~v~ 331 (358)
. + ...|..........+ . +++.+++... .....++.||+++++.+.+.
T Consensus 406 ~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 406 KAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp CTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred cCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 1 1 233332111111222 1 2345666543 12347899999988877664
No 184
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=24.71 E-value=63 Score=24.14 Aligned_cols=29 Identities=7% Similarity=0.108 Sum_probs=21.5
Q ss_pred cEEEEecCCCCEEEEEeCCCCcEEEeeecCc
Q 041631 305 GFFVQSDSRPRRLLLYDPNTQEMRDLGLRSF 335 (358)
Q Consensus 305 ~i~~~~~~~~~~l~~yd~~t~~~~~v~~~~~ 335 (358)
.|+.... .-.++.||..+++|++.+++|.
T Consensus 30 ~Il~~a~--~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSS--HVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEE--EEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCC--eEEEEEecCCcCceeEcCCcce
Confidence 4555544 4568888899999999888774
No 185
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=24.46 E-value=2.9e+02 Score=24.34 Aligned_cols=64 Identities=8% Similarity=0.125 Sum_probs=0.0
Q ss_pred CeEEEEEecCCCcEEEEEEECC-CeeeEEEEEccC----------C----------------ccceEEEeeC----CcEE
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLL----------G----------------VEEPLGVWNN----GGFF 307 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~----------~----------------~~~p~~~~~~----g~i~ 307 (358)
..+|++... +..+.+|...+ ..|++.|+.... + ..+-+++..+ +..+
T Consensus 53 ~~~~~~~~~--~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l 130 (356)
T 2w18_A 53 KEPCIITAC--EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVL 130 (356)
T ss_dssp CEEEEEEEE--SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEE
T ss_pred CccEEEEec--cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEE
Q ss_pred EEecCCCCEEEEEeCCCCcE
Q 041631 308 VQSDSRPRRLLLYDPNTQEM 327 (358)
Q Consensus 308 ~~~~~~~~~l~~yd~~t~~~ 327 (358)
...+ +..-++++.++++
T Consensus 131 ~s~g---~~~~v~~l~~g~l 147 (356)
T 2w18_A 131 LKSG---NIKAVLGLTKRRL 147 (356)
T ss_dssp EEEE---EEEEEEEETTTEE
T ss_pred EeCC---CeEEEEecCCCcE
No 186
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=24.05 E-value=3.5e+02 Score=23.38 Aligned_cols=101 Identities=7% Similarity=0.099 Sum_probs=48.6
Q ss_pred EEEEEECCCceEE-EecCCCCccccccc---ceeEE-CCeEEEEEecCCCcEEEEEEECCCe----------eeEEEEEc
Q 041631 226 IIISFDMANEVFQ-EVQCPDIASSAYME---TLDLY-HDSLSLLFLNTTNNHYEIWVLKERI----------WSKHLSVT 290 (358)
Q Consensus 226 ~il~fD~~~e~~~-~i~~P~~~~~~~~~---~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~----------W~~~~~i~ 290 (358)
.|..+|+.+.+.. .+..+......... .+... +|++.+.... +..+.||-+.... ......+.
T Consensus 230 ~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T 1erj_A 230 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--DRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 307 (393)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--TSEEEEEEC---------------CEEEEEE
T ss_pred cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC--CCEEEEEECCCCCCcccccCCCCCcceEEEe
Confidence 5888898876543 33322211111111 23333 5665554443 6799999987511 11111111
Q ss_pred cC-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 291 LL-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 291 ~~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
.. ....-+++..++..++.... ++.+..||.++++...
T Consensus 308 ~h~~~v~~~~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 308 GHKDFVLSVATTQNDEYILSGSK-DRGVLFWDKKSGNPLL 346 (393)
T ss_dssp CCSSCEEEEEECGGGCEEEEEET-TSEEEEEETTTCCEEE
T ss_pred cccCcEEEEEECCCCCEEEEEeC-CCeEEEEECCCCeEEE
Confidence 11 11223444456666655432 6789999999877544
No 187
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=23.36 E-value=3.4e+02 Score=22.91 Aligned_cols=110 Identities=10% Similarity=-0.008 Sum_probs=58.5
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECC-CeeeE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKE-RIWSK 285 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~ 285 (358)
.+|.+||..... ..|.++|+.......+--.. .. ....++.- +|.|++.... .... |++.+- ++-.+
T Consensus 87 ~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~~~~-~~--~P~~iavdp~~g~ly~~d~~-~~~~--I~~~~~dG~~~~ 156 (316)
T 1ijq_A 87 IHSNIYWTDSVL----GTVSVADTKGVKRKTLFREN-GS--KPRAIVVDPVHGFMYWTDWG-TPAK--IKKGGLNGVDIY 156 (316)
T ss_dssp TTTEEEEEETTT----TEEEEEETTSSSEEEEEECT-TC--CEEEEEEETTTTEEEEEECS-SSCE--EEEEETTSCCEE
T ss_pred cCCeEEEEECCC----CEEEEEeCCCCceEEEEECC-CC--CcceEEeCCCCCEEEEEccC-CCCe--EEEEcCCCCCeE
Confidence 468999986544 37999999876544331111 11 11144443 5667665432 1133 444432 22211
Q ss_pred EEEEccCCccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEee
Q 041631 286 HLSVTLLGVEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 286 ~~~i~~~~~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~ 331 (358)
. +....+..|.++. +++.||+.... .+.+..+|++++..+.+.
T Consensus 157 ~--~~~~~~~~P~gla~d~~~~~lY~~D~~-~~~I~~~d~dg~~~~~~~ 202 (316)
T 1ijq_A 157 S--LVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTIL 202 (316)
T ss_dssp E--EECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEE
T ss_pred E--EEECCCCCceEEEEeccCCEEEEEECC-CCeEEEEecCCCceEEEe
Confidence 1 1112344565543 24667776542 568999999876666654
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=23.31 E-value=3.2e+02 Score=22.57 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=60.0
Q ss_pred EEeCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECC-Ceee
Q 041631 207 TYLDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKE-RIWS 284 (358)
Q Consensus 207 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~ 284 (358)
+.-+|.++. ... ..|..||.+.+....+..|...... ....+ +|++.+.... ..-.|+.++. ++..
T Consensus 44 ~~pdG~ilv-s~~-----~~V~~~d~~G~~~W~~~~~~~~~~~---~~~~~~dG~~lv~~~~---~~~~v~~vd~~Gk~l 111 (276)
T 3no2_A 44 ATKAGEILF-SYS-----KGAKMITRDGRELWNIAAPAGCEMQ---TARILPDGNALVAWCG---HPSTILEVNMKGEVL 111 (276)
T ss_dssp ECTTSCEEE-ECB-----SEEEEECTTSCEEEEEECCTTCEEE---EEEECTTSCEEEEEES---TTEEEEEECTTSCEE
T ss_pred ECCCCCEEE-eCC-----CCEEEECCCCCEEEEEcCCCCcccc---ccEECCCCCEEEEecC---CCCEEEEEeCCCCEE
Confidence 444787765 322 3699999955544555655322111 22233 6776665432 1235566654 3332
Q ss_pred EEEEEccC---Cc--cceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeeec
Q 041631 285 KHLSVTLL---GV--EEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGLR 333 (358)
Q Consensus 285 ~~~~i~~~---~~--~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~~ 333 (358)
....+... +. ..-+....+|.+++.... ++.++.||++.+.+-++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-~~~v~~~d~~G~~~w~~~~~ 164 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-TSEVREIAPNGQLLNSVKLS 164 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-TTEEEEECTTSCEEEEEECS
T ss_pred EEEeccCCCCcccccccCceECCCCCEEEEecC-CCEEEEECCCCCEEEEEECC
Confidence 22333211 11 112334457777776542 67899999996666665543
No 189
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=23.15 E-value=68 Score=16.41 Aligned_cols=14 Identities=21% Similarity=0.375 Sum_probs=11.5
Q ss_pred CCEEEEEeCCCCcE
Q 041631 314 PRRLLLYDPNTQEM 327 (358)
Q Consensus 314 ~~~l~~yd~~t~~~ 327 (358)
.++.++||..|++-
T Consensus 9 ~g~~YYyN~~T~~s 22 (27)
T 1e0n_A 9 NGRPLYYNAEQKTK 22 (27)
T ss_dssp SSSEEEEETTTTEE
T ss_pred CCCeEEEECCCCCE
Confidence 67899999998763
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.08 E-value=5e+02 Score=24.80 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=59.1
Q ss_pred EEeCC-eEEEEEeecCCCceEEEEEECCCc---eEEEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEEC--
Q 041631 207 TYLDG-LCHWLWELEDSKHKIIISFDMANE---VFQEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLK-- 279 (358)
Q Consensus 207 v~~~G-~lywl~~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~-- 279 (358)
+.-+| .+|+.+.. +.....|..+|+.+. .|+.+-.+...... ..+... ++.|.+..... ....||+++
T Consensus 293 ~s~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~lv~~~~~~--g~~~l~~~~~~ 367 (710)
T 2xdw_A 293 VTNEGTVFTFKTNR-HSPNYRLINIDFTDPEESKWKVLVPEHEKDVL--EWVACVRSNFLVLCYLHD--VKNTLQLHDLA 367 (710)
T ss_dssp EEEETTEEEEEECT-TCTTCEEEEEETTSCCGGGCEEEECCCSSCEE--EEEEEETTTEEEEEEEET--TEEEEEEEETT
T ss_pred EeccCCEEEEEECC-CCCCCEEEEEeCCCCCcccceeccCCCCCCeE--EEEEEEcCCEEEEEEEEC--CEEEEEEEECC
Confidence 33344 57766543 222457999999875 46655332221110 123344 67777766553 344555554
Q ss_pred CCeeeEEEEEccC-CccceEEEeeCC-cEEEEec--CCCCEEEEEeCCCCc--EEEe
Q 041631 280 ERIWSKHLSVTLL-GVEEPLGVWNNG-GFFVQSD--SRPRRLLLYDPNTQE--MRDL 330 (358)
Q Consensus 280 ~~~W~~~~~i~~~-~~~~p~~~~~~g-~i~~~~~--~~~~~l~~yd~~t~~--~~~v 330 (358)
++. ....+... ....-+....++ .+++... .....++.||+++++ .+.+
T Consensus 368 ~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 368 TGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred CCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 332 22334322 111112222344 5555533 235689999999887 5544
No 191
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=22.89 E-value=3.3e+02 Score=22.65 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=39.4
Q ss_pred CeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC-CccceEEEeeC--CcEEEEecCCCCEEEEEeCCCC
Q 041631 259 DSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL-GVEEPLGVWNN--GGFFVQSDSRPRRLLLYDPNTQ 325 (358)
Q Consensus 259 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~-~~~~p~~~~~~--g~i~~~~~~~~~~l~~yd~~t~ 325 (358)
|.+.+.+.. +.++.||-++.+.|.....+... .-..-+.+..+ +.++..... ++.+..||++++
T Consensus 71 ~~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~-D~~i~lwd~~~~ 137 (316)
T 3bg1_A 71 GNILASCSY--DRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS-DGAISLLTYTGE 137 (316)
T ss_dssp SSCEEEEET--TSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS-SSCEEEEEECSS
T ss_pred CCEEEEEEC--CCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC-CCCEEEEecCCC
Confidence 555554443 57899999887778777766432 22223444443 555554332 678899998775
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=22.39 E-value=3.2e+02 Score=22.32 Aligned_cols=192 Identities=7% Similarity=0.035 Sum_probs=89.7
Q ss_pred CeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeEEEEEecCCCCceec
Q 041631 111 DRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSLCTIYNLRTNSWRDL 190 (358)
Q Consensus 111 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~~~vyss~~~~W~~~ 190 (358)
..++++||.+++...+..+... + ......++.+|+..+.. .+ .. . ...+. +|+.. +..+..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~---~--~~~~~~~i~~~~~~g~l-~v-~~-~-------~~~l~---~~d~~-g~~~~~ 106 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVN---G--YGGIPAGCQCDRDANQL-FV-AD-M-------RLGLL---VVQTD-GTFEEI 106 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEET---T--EECCEEEEEECSSSSEE-EE-EE-T-------TTEEE---EEETT-SCEEEC
T ss_pred CEEEEEeCCCCcEEEEEecccC---C--CCCCCceEEEecCCCcE-EE-EE-C-------CCCEE---EEeCC-CCEEEE
Confidence 3468899988887655431100 0 01223456666642321 11 11 1 11345 77776 554433
Q ss_pred -cc-ccCeeeeecCCcceEEe--CCeEEEEEeecC-----------CCceEEEEEECCCceEEEecCCCCccccccccee
Q 041631 191 -VC-FKTIHYCIPHSHGCTYL--DGLCHWLWELED-----------SKHKIIISFDMANEVFQEVQCPDIASSAYMETLD 255 (358)
Q Consensus 191 -~~-~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-----------~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~ 255 (358)
.. ....+. .....+.+ +|.+|+...... .....|..+|.. .++..+.-.. . ....+.
T Consensus 107 ~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~--~~~~i~ 178 (314)
T 1pjx_A 107 AKKDSEGRRM---QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF--Q--FPNGIA 178 (314)
T ss_dssp CSBCTTSCBC---BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE--S--SEEEEE
T ss_pred EeccCCCccc---cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC--C--CcceEE
Confidence 21 011111 11123333 688876543220 012478999987 5554331100 0 001233
Q ss_pred EE-----CCe-EEEEEecCCCcEEEEEEECC-CeeeEEEEEccC--Cc-cce--EEEeeCCcEEEEecCCCCEEEEEeCC
Q 041631 256 LY-----HDS-LSLLFLNTTNNHYEIWVLKE-RIWSKHLSVTLL--GV-EEP--LGVWNNGGFFVQSDSRPRRLLLYDPN 323 (358)
Q Consensus 256 ~~-----~g~-L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~--~~-~~p--~~~~~~g~i~~~~~~~~~~l~~yd~~ 323 (358)
.. +|+ |.+... ....+.+|-++. +.......+... .. ..| +++..+|.+++.... .+.+..||++
T Consensus 179 ~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-~~~i~~~d~~ 255 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-SSHIEVFGPD 255 (314)
T ss_dssp EEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-TTEEEEECTT
T ss_pred EecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-CCEEEEEcCC
Confidence 22 343 433332 246777777663 444332222111 11 234 444567888887632 5789999998
Q ss_pred CCc-EEEeee
Q 041631 324 TQE-MRDLGL 332 (358)
Q Consensus 324 t~~-~~~v~~ 332 (358)
+++ .+.+..
T Consensus 256 ~g~~~~~~~~ 265 (314)
T 1pjx_A 256 GGQPKMRIRC 265 (314)
T ss_dssp CBSCSEEEEC
T ss_pred CCcEeEEEeC
Confidence 544 344443
No 193
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=21.78 E-value=4.6e+02 Score=23.92 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=0.0
Q ss_pred CCeEEEEEeecCCCceEEEEEECCCceEEEecCC---CCcccccccceeEECCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 210 DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCP---DIASSAYMETLDLYHDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 210 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P---~~~~~~~~~~L~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
+|.....+...+ .|..+|+.+.+....-.. ............ +|...+.... +..+.+|-+....-...
T Consensus 218 ~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~--d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 218 SGEFVITVGSDR----KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGA--DATIRVWDVTTSKCVQK 289 (615)
T ss_dssp TCCEEEEEETTC----CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEET--TSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCC----eEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcC--CCcEEEEECCCCcEEEE
Q ss_pred EEEccC---CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEeeecCce-eEEEEeeecceeCCCCCCCCCC
Q 041631 287 LSVTLL---GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDLGLRSFW-FSVYNFKESLIPVKGVDSFSDI 358 (358)
Q Consensus 287 ~~i~~~---~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~~~~~-~~~~~y~~slv~~~~~~~~~~~ 358 (358)
...... .....+...++..++.... ++.+..||+++++.......... .....+ +. +-.+..++.|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i 359 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVATGNGRIISLSL--DGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRI 359 (615)
T ss_dssp EECCTTCGGGCEEEEEEEETTEEEEEET--TSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCE
T ss_pred EcCCCCcccCceeEEEeCCCCeEEEEEC--CCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeE
No 194
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=21.75 E-value=3.3e+02 Score=22.23 Aligned_cols=33 Identities=9% Similarity=0.195 Sum_probs=20.2
Q ss_pred EEEeeCCcEEEEecCCCCEEEEEeCCCC-cEEEee
Q 041631 298 LGVWNNGGFFVQSDSRPRRLLLYDPNTQ-EMRDLG 331 (358)
Q Consensus 298 ~~~~~~g~i~~~~~~~~~~l~~yd~~t~-~~~~v~ 331 (358)
+.+..++.+++.... ++.+..||++++ .++.+.
T Consensus 312 ~~~s~~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 312 VSWNLTGTILSSAGD-DGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEECSSSCCEEEEET-TSCEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEecC-CCcEEEEecCcCcchhhee
Confidence 344456665555432 678999998875 444443
No 195
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=21.74 E-value=1.4e+02 Score=21.50 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=28.7
Q ss_pred eEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEE
Q 041631 113 ITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIY 161 (358)
Q Consensus 113 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 161 (358)
+++.+|.|++|. |..... .....+.+.+|+..+.|.|+...
T Consensus 13 V~~~d~~~~~W~--p~~~g~------~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 13 VMLYDDGNKRWL--PAGTGP------QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp CBEECTTTSSCC--BSSCSC------CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCcee--ECCCCC------CCccEEEEEEeCCCCEEEEEEEE
Confidence 488899999964 543210 01345788899989999998764
No 196
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.10 E-value=3.2e+02 Score=23.18 Aligned_cols=102 Identities=7% Similarity=-0.028 Sum_probs=51.7
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccceeEE-CCe-EEEEEecCCCcE--EEEEEECCCeeeEEEEEccCCccceEEE
Q 041631 225 KIIISFDMANEVFQEVQCPDIASSAYMETLDLY-HDS-LSLLFLNTTNNH--YEIWVLKERIWSKHLSVTLLGVEEPLGV 300 (358)
Q Consensus 225 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~--l~IW~l~~~~W~~~~~i~~~~~~~p~~~ 300 (358)
..|..+|+.+.+...+........ ...+... +|+ |.+.....+... +.+|-++.+......... ... ..+
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~--~~~ 289 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGES--CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS--HLM 289 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEE--EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE--EEE
T ss_pred ceEEEEECCCCceeEeeccCCCcc--ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC--CCc
Confidence 368888988776665433110100 0022222 565 455444333334 666655444333332221 111 344
Q ss_pred ee-CCcEEEEec---------------CCCCEEEEEeCCCCcEEEeee
Q 041631 301 WN-NGGFFVQSD---------------SRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 301 ~~-~g~i~~~~~---------------~~~~~l~~yd~~t~~~~~v~~ 332 (358)
.. +|++++... .....++.+|+++++.+.+..
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccC
Confidence 45 776665421 013689999999988777643
No 197
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=20.91 E-value=5.8e+02 Score=24.76 Aligned_cols=208 Identities=10% Similarity=0.096 Sum_probs=98.8
Q ss_pred eeeecceEEEeecCCeeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 97 GGPYDGIYCIFGLRDRITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 97 ~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
....+|-+.+....+.++.+||.++++......... +... .......+..|+.. . +++... . .+-
T Consensus 221 ~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~-~~~l-~~~~i~~i~~d~~g-~---lWigt~-------~-Gl~- 285 (795)
T 4a2l_A 221 LQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSN-PKSI-SSNYIRSLAMDSQN-R---LWIGTF-------N-DLN- 285 (795)
T ss_dssp EEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTC-TTSC-SCSBEEEEEECTTS-C---EEEEES-------S-CEE-
T ss_pred EEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCC-cccc-CCCeEEEEEEcCCC-C---EEEEeC-------C-hhh-
Confidence 334567666665444578889988877665433210 0000 01122333334321 1 222221 2 345
Q ss_pred EEEEecCCCCceecccccCeeeeecCCc-ceEEeC--CeEEEEEeecCCCceEEEEEECCCceEEEecCCCCccc-ccc-
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSH-GCTYLD--GLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASS-AYM- 251 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~~--G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~-~~~- 251 (358)
+|+..++.+......+..+..+.... .+++.| |.+ |++...+ .|..+|..+..|..+........ ...
T Consensus 286 --~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~~~----Gl~~~~~~~~~~~~~~~~~~~~~l~~~~ 358 (795)
T 4a2l_A 286 --IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTYFG----GLNYYHPIRNRFKNIRNIPYKNSLSDNV 358 (795)
T ss_dssp --EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEESSS----CEEEECGGGGSSEEECCCTTSSSCSCSS
T ss_pred --eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEECCC----CeEEeCCCcccceEEcCCCCCCCCCCCe
Confidence 77777777665432110010010111 144443 554 5665433 58999999888887654221111 010
Q ss_pred -cceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEc-----cC--CccceEEEeeCCc-EEEEecCCCCEEEEEe
Q 041631 252 -ETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVT-----LL--GVEEPLGVWNNGG-FFVQSDSRPRRLLLYD 321 (358)
Q Consensus 252 -~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~-----~~--~~~~p~~~~~~g~-i~~~~~~~~~~l~~yd 321 (358)
..+.+- +|.|-+-+.. ..+..|-.+.+.+.....-. .. ....-+....+|. |.+.+. .+.|+.||
T Consensus 359 V~~i~~d~~g~lWiGt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~--~~Gl~~~d 433 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTND---GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH--AGGLSILH 433 (795)
T ss_dssp EEEEEECTTSCEEEEESS---SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET--TTEEEEEE
T ss_pred eEEEEECCCCCEEEEECC---CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC--cCceeEEe
Confidence 123333 4555543321 23333332223333221100 01 1112233345788 888776 67899999
Q ss_pred CCCCcEEEee
Q 041631 322 PNTQEMRDLG 331 (358)
Q Consensus 322 ~~t~~~~~v~ 331 (358)
.++++++.+.
T Consensus 434 ~~~~~~~~~~ 443 (795)
T 4a2l_A 434 RNSGQVENFN 443 (795)
T ss_dssp TTTCCEEEEC
T ss_pred CCCCcEEEee
Confidence 9999888764
No 198
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=20.69 E-value=84 Score=20.27 Aligned_cols=17 Identities=12% Similarity=0.235 Sum_probs=14.5
Q ss_pred CEEEEEeCCCCcEEEee
Q 041631 315 RRLLLYDPNTQEMRDLG 331 (358)
Q Consensus 315 ~~l~~yd~~t~~~~~v~ 331 (358)
-+++.||.++++++-+.
T Consensus 40 iKIykyde~tNeI~LkK 56 (72)
T 3kvp_A 40 IKIYEYNESRNEVKLKK 56 (72)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCeEEEEE
Confidence 47999999999988764
No 199
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=20.60 E-value=3.5e+02 Score=22.13 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=51.8
Q ss_pred EEEEEECCCceE-EEecCCCCcccccccceeEE-CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccC--CccceEEEe
Q 041631 226 IIISFDMANEVF-QEVQCPDIASSAYMETLDLY-HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLL--GVEEPLGVW 301 (358)
Q Consensus 226 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~--~~~~p~~~~ 301 (358)
.|..+|+.+.+. ..+...... -..+... +|++.+.... ...+.||-+....- ...+... ....-+.+.
T Consensus 130 ~i~iwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAHSDP----VSAVHFNRDGSLIVSSSY--DGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFS 201 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET--TSCEEEEETTTCCE--EEEECCSSCCCEEEEEEC
T ss_pred cEEEEECCCCEEEEEecCCCCc----EEEEEEcCCCCEEEEEeC--CCcEEEEECCCCce--eeEEeccCCCceEEEEEC
Confidence 588889887654 233221110 0022222 5666555544 57899998876322 2222111 112234455
Q ss_pred eCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 302 NNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 302 ~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
.++..++.... ++.+..||+++++....
T Consensus 202 ~~~~~l~~~~~-d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 202 PNGKYILAATL-DNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp TTSSEEEEEET-TTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEcC-CCeEEEEECCCCcEEEE
Confidence 56766665432 67899999988775543
No 200
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=20.58 E-value=4.4e+02 Score=23.22 Aligned_cols=112 Identities=11% Similarity=0.002 Sum_probs=60.2
Q ss_pred eCCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccceeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEE
Q 041631 209 LDGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMETLDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKH 286 (358)
Q Consensus 209 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 286 (358)
.+|.|||..... ..|.++|+.......+-. .... ....|+.- +|.|+..... ....+..--++. .-.+
T Consensus 169 ~~~~lY~~d~~~----~~I~~~~~~g~~~~~l~~-~~~~--~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG-~~~~- 238 (400)
T 3p5b_L 169 IHSNIYWTDSVL----GTVSVADTKGVKRKTLFR-ENGS--KPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG-VDIY- 238 (400)
T ss_dssp TTTEEEEEETTT----TEEEEECTTTCSEEEEEE-CSSC--CEEEEEEETTTTEEEEEECS-SSCCEEEEETTS-CSCE-
T ss_pred cCCceEEEECCC----CeEEEEeCCCCceEEEEe-CCCC--CcceEEEecccCeEEEEeCC-CCCEEEEEeCCC-CccE-
Confidence 368999986544 379999998775544321 1111 11134443 5777665432 123333333332 2111
Q ss_pred EEEccCCccceEEEe---eCCcEEEEecCCCCEEEEEeCCCCcEEEeee
Q 041631 287 LSVTLLGVEEPLGVW---NNGGFFVQSDSRPRRLLLYDPNTQEMRDLGL 332 (358)
Q Consensus 287 ~~i~~~~~~~p~~~~---~~g~i~~~~~~~~~~l~~yd~~t~~~~~v~~ 332 (358)
.+....+..|.++. .++.||+.... .+.+..+|++....+.+..
T Consensus 239 -~~~~~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 239 -SLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp -EEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCCEEEEE
T ss_pred -EEEECCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCCCccEEEEe
Confidence 11112345565543 35667776542 5689999998877766643
No 201
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=20.49 E-value=4.2e+02 Score=22.99 Aligned_cols=67 Identities=9% Similarity=0.046 Sum_probs=39.1
Q ss_pred CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEcc--C-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEE
Q 041631 258 HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTL--L-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRD 329 (358)
Q Consensus 258 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~--~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~ 329 (358)
+|.+.+.... ...+.||-+....- ...+.. . ....-+.+..++..++.... ++.+..||+++++...
T Consensus 181 ~~~~l~~~~~--d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTN--LSRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGTT-RGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEET--TSEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEET-TSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeC--CCeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEcC-CCeEEEEEcCCccEEE
Confidence 3555555544 57999999876322 222322 1 12223444556766665442 6779999998877654
No 202
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=20.32 E-value=5.6e+02 Score=24.32 Aligned_cols=194 Identities=10% Similarity=-0.014 Sum_probs=95.3
Q ss_pred eeecceEEEeecCC-eeEEEecCccceecCCCCCCCCCCCCCcccceEEEeeeCCCCCEEEEEEEEEecCCCcccceeeE
Q 041631 98 GPYDGIYCIFGLRD-RITLWNVATRDSRTLPNYGPTCPPNTKVYKTSVGFGLDPNRNDYKLIMIYTYWDERTTELHEFSL 176 (358)
Q Consensus 98 ~s~~GLl~l~~~~~-~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~e~ 176 (358)
++.+|.|.+.+... .++..++-+.....+-.... ....|+.+|..++. +... . . ....++
T Consensus 357 d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~---------~~p~GlAvD~~~~~--lY~t--D-~----~~~~I~- 417 (619)
T 3s94_A 357 DPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI---------AHPDGIAVDWVARN--LYWT--D-T----GTDRIE- 417 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTE--EEEE--E-T----TTTEEE-
T ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC---------CCcCceEEecccCc--EEEE--e-C----CCCcEE-
Confidence 34466666665433 34666766543332222111 12346777765543 2211 1 1 144667
Q ss_pred EEEEecCCCCceecccccCeeeeecCCcceEEe---CCeEEEEEeecCCCceEEEEEECCCceEEEecCCCCcccccccc
Q 041631 177 CTIYNLRTNSWRDLVCFKTIHYCIPHSHGCTYL---DGLCHWLWELEDSKHKIIISFDMANEVFQEVQCPDIASSAYMET 253 (358)
Q Consensus 177 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (358)
+.++.+..-+.... .. ...+.++.+ +|.+||...... ..|..+++....-..+- ..... ....
T Consensus 418 --v~~~~G~~~~~l~~-~~-----l~~P~~iavdp~~G~ly~tD~g~~---~~I~r~~~dG~~~~~l~-~~~l~--~P~G 483 (619)
T 3s94_A 418 --VTRLNGTMRKILIS-ED-----LEEPRAIVLDPMVGYMYWTDWGEI---PKIERAALDGSDRVVLV-NTSLG--WPNG 483 (619)
T ss_dssp --EEETTSCSCEEEEC-TT-----CCSEEEEEEETTTTEEEEEECSSS---CEEEEEETTSCSCEEEE-CSSCS--CEEE
T ss_pred --EEeCCCCeEEEEEE-CC-----CCCeeeEEEEcCCCcEEEecCCCC---CEEEEEccCCCccEEEE-eCCCC--CCee
Confidence 88877653333221 11 122334444 499999865332 47889988765433331 11111 1113
Q ss_pred eeEE--CCeEEEEEecCCCcEEEEEEECCCeeeEEEEEccCCccceEEEee-CCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 254 LDLY--HDSLSLLFLNTTNNHYEIWVLKERIWSKHLSVTLLGVEEPLGVWN-NGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 254 L~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~p~~~~~-~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
|+.- +++|+++... ...++.--++. .-.+ .+....+..|.++.- ++.||.... ..+.+...|..+++-+.+
T Consensus 484 lalD~~~~~LY~aD~~--~~~I~~~~~dG-~~~~--~~~~~~l~~P~glav~~~~ly~tD~-~~~~I~~~~k~~g~~~~~ 557 (619)
T 3s94_A 484 LALDYDEGKIYWGDAK--TDKIEVMNTDG-TGRR--VLVEDKIPHIFGFTLLGDYVYWTDW-QRRSIERVHKRSAEREVI 557 (619)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEESSS-CCCE--EEEECCCCSSCCEEEETTEEEEECT-TSSCEEEEESSSCCEEEE
T ss_pred eEEcccCCEEEEEECC--CCEEEEEecCC-CceE--EEeccCCCCcEEEEEECCEEEEeec-CCCeEEEEEcCCCceEEE
Confidence 4443 6788887643 44554444444 1111 111123445544432 445555543 256799999888865444
No 203
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=20.26 E-value=3.8e+02 Score=22.40 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=35.5
Q ss_pred CcEEEEEEECC------CeeeEEEEEcc-C-CccceEEEeeCCcEEEEecCCCCEEEEEeCCCCcEEEe
Q 041631 270 NNHYEIWVLKE------RIWSKHLSVTL-L-GVEEPLGVWNNGGFFVQSDSRPRRLLLYDPNTQEMRDL 330 (358)
Q Consensus 270 ~~~l~IW~l~~------~~W~~~~~i~~-~-~~~~p~~~~~~g~i~~~~~~~~~~l~~yd~~t~~~~~v 330 (358)
+..+.||-+.. ..|.....+.. . .-...+.+..++.|+.... ++.+..||.++++++.+
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~--dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGA--DGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEET--TSCEEEEEEETTEEEEE
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeC--CCEEEEEEcCCCceEEE
Confidence 57899998864 35665555432 1 1112333334554444444 77899999988866544
Done!