BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041632
(452 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 218 LLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFM 276
L + S + L A+D FS+ N++G G FG VYKG DGT+VA+K + +R QG F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQ 83
Query: 277 AECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREI 336
E + + H+NL+R+ C + + +VY YM NGS+ L R+R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCL-------RERPE 131
Query: 337 EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF 396
L +R IA+ A L YLH HC I+H D+K +NILLD + A +GDFGL++
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 397 YQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
+ VRGTIG++APEY + S DV+ YG++LLE++T ++ D
Sbjct: 192 ---MDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 218 LLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFM 276
L + S + L A+D F + N++G G FG VYKG DG +VA+K + +R QG F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQ 75
Query: 277 AECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREI 336
E + + H+NL+R+ C + + +VY YM NGS+ L R+R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCL-------RERPE 123
Query: 337 EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF 396
L +R IA+ A L YLH HC I+H D+K +NILLD + A +GDFGL++
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 397 YQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
+ VRG IG++APEY + S DV+ YG++LLE++T ++ D
Sbjct: 184 ---MDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI 285
L +AT+ F LIG G FG VYKGV DG VA+K + + F E + L
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
RH +LV +I C + N+ ++YKYM NG+L++ L+ +P E Q
Sbjct: 93 RHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTMSMSWE-------Q 140
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
R+ I I A L YLH I+H D+K NILLD + I DFG+S+ + +
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
V+GT+GY+ PEY + ++ DVYS+G++L E++ +
Sbjct: 198 XXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI 285
L +AT+ F LIG G FG VYKGV DG VA+K + + F E + L
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
RH +LV +I C + N+ ++YKYM NG+L++ L+ +P E Q
Sbjct: 93 RHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTMSMSWE-------Q 140
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
R+ I I A L YLH I+H D+K NILLD + I DFG+S+ + +
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
V+GT+GY+ PEY + ++ DVYS+G++L E++ +
Sbjct: 198 XXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIK----VINLQRQGASKSFMAECKALKNIRHKNLVR 292
N +G G FG VYKG + T VA+K ++++ + + F E K + +H+NLV
Sbjct: 37 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP-DAIPQRDREIEIQKLTLLQRISIAI 351
++ S G+D +VY YMPNGSL L D P L+ R IA
Sbjct: 95 LLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTP---------PLSWHMRCKIAQ 140
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
A+ +++LH++ +H D+K +NILLD +A I DFGL+R + + + S I
Sbjct: 141 GAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI-- 195
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
GT Y+APE L E++ D+YS+G++LLE++T
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 27/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIK----VINLQRQGASKSFMAECKALKNIRHKNLVR 292
N +G G FG VYKG + T VA+K ++++ + + F E K + +H+NLV
Sbjct: 37 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP-DAIPQRDREIEIQKLTLLQRISIAI 351
++ S G+D +VY YMPNGSL L D P L+ R IA
Sbjct: 95 LLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTP---------PLSWHMRCKIAQ 140
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
A+ +++LH++ +H D+K +NILLD +A I DFGL+R + + + I
Sbjct: 141 GAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI-- 195
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
GT Y+APE L E++ D+YS+G++LLE++T
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 27/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIK----VINLQRQGASKSFMAECKALKNIRHKNLVR 292
N +G G FG VYKG + T VA+K ++++ + + F E K + +H+NLV
Sbjct: 31 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP-DAIPQRDREIEIQKLTLLQRISIAI 351
++ S G+D +VY YMPNGSL L D P L+ R IA
Sbjct: 89 LLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTP---------PLSWHMRCKIAQ 134
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
A+ +++LH++ +H D+K +NILLD +A I DFGL+R + + + I
Sbjct: 135 GAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI-- 189
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
GT Y+APE L E++ D+YS+G++LLE++T
Sbjct: 190 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 22/214 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+V++ + G+ VA+K++ Q A + F+ E +K +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ Q + +IV +Y+ GSL + LH RE +L +R+S+A DVA
Sbjct: 103 VT----QPPNL-SIVTEYLSRGSLYRLLHKSGA----RE----QLDERRRLSMAYDVAKG 149
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
++YLH PI+H +LK N+L+D + + DFGLSR + T SS GT
Sbjct: 150 MNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS----TFLSSKSAAGTPE 204
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE + DVYS+G++L E+ T ++P
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 22/214 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+V++ + G+ VA+K++ Q A + F+ E +K +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ Q + +IV +Y+ GSL + LH RE +L +R+S+A DVA
Sbjct: 103 VT----QPPNL-SIVTEYLSRGSLYRLLHKSGA----RE----QLDERRRLSMAYDVAKG 149
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
++YLH PI+H DLK N+L+D + + DFGLSR + S GT
Sbjct: 150 MNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS----XFLXSKXAAGTPE 204
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE + DVYS+G++L E+ T ++P
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIK----VINLQRQGASKSFMAECKALKNIRHKNLVR 292
N G G FG VYKG + T VA+K ++++ + + F E K +H+NLV
Sbjct: 28 NKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP-DAIPQRDREIEIQKLTLLQRISIAI 351
++ S G+D +VY Y PNGSL L D P L+ R IA
Sbjct: 86 LLGFSSD----GDDL-CLVYVYXPNGSLLDRLSCLDGTP---------PLSWHXRCKIAQ 131
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
A+ +++LH++ +H D+K +NILLD +A I DFGL+R + + S I
Sbjct: 132 GAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI-- 186
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
GT Y APE L E++ D+YS+G++LLE++T
Sbjct: 187 VGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 118/238 (49%), Gaps = 38/238 (15%)
Query: 222 SYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKA 281
SY ++A++ ST IG GSFG+VYKG + D V +KV++ + ++F E
Sbjct: 28 SYYWEIEASEVMLSTR-IGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAV 85
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L+ RH N++ + + D AIV ++ SL K LH ++ K
Sbjct: 86 LRKTRHVNILLFM------GYMTKDNLAIVTQWCEGSSLYKHLH----------VQETKF 129
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL----SRF- 396
+ Q I IA A +DYLH + I+H D+K +NI L L+ IGDFGL SR+
Sbjct: 130 QMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186
Query: 397 -YQAVSNPTVSSSIGVRGTIGYVAPE---YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Q V PT G++ ++APE + S DVYSYGI+L E++T + P
Sbjct: 187 GSQQVEQPT--------GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 299 -SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
F IV +YMP G+L +L RE +++T + + +A ++SA+
Sbjct: 99 LEPPFY------IVTEYMPYGNLLDYL---------RECNREEVTAVVLLYMATQISSAM 143
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
+YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 144 EYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 197
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + S DV+++G+LL E+ T
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 85 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 128
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 182
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 88 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 131
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 132 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 185
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 87 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 130
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 131 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 184
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 31 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 89 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 132
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 133 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 186
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 79 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 122
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 176
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 85 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 128
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 182
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 26 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 84 QEPI------YIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 127
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 128 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 181
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 23 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 81 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 124
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 125 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 178
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 22 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 80 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 123
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 124 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 177
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 79 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 122
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKW 176
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 33/220 (15%)
Query: 237 NLIGVGSFGSVYKGVFDEDG---TVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNL 290
+IG G FG V +G G + VAIK + +RQ + F++E + H N+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPNI 77
Query: 291 VR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
+R V+T+ V I+ ++M NG+L+ +L + + T++Q +
Sbjct: 78 IRLEGVVTNSMPV--------MILTEFMENGALDSFLR----------LNDGQFTVIQLV 119
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA-VSNPTVS 406
+ +AS + YL + +H DL NIL++++L + DFGLSRF + S+PT +
Sbjct: 120 GMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
SS+G + I + APE + ++ D +SYGI++ E+++
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 79 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 122
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 176
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 16 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 74 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 117
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 118 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 171
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 33/219 (15%)
Query: 238 LIGVGSFGSVYKGVFDEDG---TVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNLV 291
+IG G FG V +G G + VAIK + +RQ + F++E + H N++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPNII 80
Query: 292 R---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
R V+T+ V I+ ++M NG+L+ +L + + T++Q +
Sbjct: 81 RLEGVVTNSMPV--------MILTEFMENGALDSFLR----------LNDGQFTVIQLVG 122
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA-VSNPTVSS 407
+ +AS + YL + +H DL NIL++++L + DFGLSRF + S+PT +S
Sbjct: 123 MLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
S+G + I + APE + ++ D +SYGI++ E+++
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 123
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 124 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWT 177
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
++ AIV ++ SL LH I K +++ I IA A
Sbjct: 73 STAPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 116
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 171
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 100 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 143
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 144 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 198
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 144
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 145 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 199
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ-RQGASKSFMAECKALKNI 285
+ ++ F +G G++ +VYKG+ G VA+K + L +G + + E +K +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H+N+VR+ + + +V+++M N L+K++ + R +E+ + Q
Sbjct: 61 KHENIVRLYDVIHT-----ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
+ L + H++ ILH DLKP N+L++ +GDFGL+R + N T
Sbjct: 115 -----WQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-TF 165
Query: 406 SSSIGVRGTIGYVAPEYGLGSEV-STNGDVYSYGILLLEMVTTK 448
SS + T+ Y AP+ +GS ST+ D++S G +L EM+T K
Sbjct: 166 SSEV---VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 75 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 118
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 119 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 173
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 121
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 122 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 176
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ + T VAIK + + +SF+ E + +K ++H LV++ S
Sbjct: 17 LGNGQFGEVWMGTWNGN-TKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L ++ E + L L + +A VA+ +
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFL---------KDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ N L I DFGL+R + + ++ G + I +
Sbjct: 120 YIERMN---YIHRDLRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWT 173
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+VT
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 73 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 116
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 171
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 121
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 122 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 176
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 78 ----REPPFYIII-EFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 123
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 124 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWT 177
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 123
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 124 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKFPIKWT 177
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 80 ----REPPFYIII-EFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 131 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 80 ----REPPFYIII-EFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 144
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 145 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSIL 199
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 74 EEPI------XIVTEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 118
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 119 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWT 172
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 131 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 131 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWT 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 85 ----REPPFYIII-EFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 131 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 93 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 136
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 137 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSIL 191
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 115/223 (51%), Gaps = 22/223 (9%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALK 283
K ++ TD + + +G G +G VY+GV+ + VA+K + + + F+ E +K
Sbjct: 8 KWEMERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMK 65
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
I+H NLV+++ C+ + F I+ ++M G+L +L RE Q++
Sbjct: 66 EIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYL---------RECNRQEVNA 111
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ + +A ++SA++YL + + +H DL N L+ + + DFGLSR ++
Sbjct: 112 VVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGD 165
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T ++ G + I + APE ++ S DV+++G+LL E+ T
Sbjct: 166 TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 84 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 129
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 130 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 183
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 17 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 75 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 118
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H +L+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 119 AFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKW 172
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 82 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 127
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 128 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAPAGAKFPIKWT 181
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 93 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 138
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 139 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 192
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 126 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 115/223 (51%), Gaps = 22/223 (9%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALK 283
K ++ TD + + +G G +G VY+GV+ + VA+K + + + F+ E +K
Sbjct: 9 KWEMERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMK 66
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
I+H NLV+++ C+ + F I+ ++M G+L +L RE Q++
Sbjct: 67 EIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNA 112
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ + +A ++SA++YL + + +H DL N L+ + + DFGLSR ++
Sbjct: 113 VVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGD 166
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T ++ G + I + APE ++ S DV+++G+LL E+ T
Sbjct: 167 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 81 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 126
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 127 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAPAGAKFPIKWT 180
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K IRH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 82 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 127
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 128 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 181
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH I K +++ I IA A
Sbjct: 73 STKPQL------AIVTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQTAQG 116
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L DL+ IGDFGL+ S + G+I
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSIL 171
Query: 417 YVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H DL N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 131 YLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 333 EEPIY------IVTEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 377
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 378 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 431
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 77 EEPIY------IVTEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 121
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 122 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 175
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G G V+ G ++ T VA+K + Q + +F+AE +K ++H+ LVR+ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLH-PDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
I+ +YM NGSL +L P I KLT+ + + +A +A +
Sbjct: 79 QEPIY------IITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGM 122
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++ + +H DL+ +NIL+ + LS I DFGL+R + + ++ G + I +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREGAKFPIKW 176
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL E+VT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 294
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 348
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 294
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 348
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 75 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 119
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 120 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 173
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 73 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 117
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 118 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 171
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 250 EEPI------YIVGEYMSKGSLLDFLKGETG---------KYLRLPQLVDMAAQIASGMA 294
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 295 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 348
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVCEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH + + E++KL I IA A
Sbjct: 77 STKPQL------AIVTQWCEGSSLYHHLHAS-----ETKFEMKKL-----IDIARQTARG 120
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L D + IGDFGL+ S + G+I
Sbjct: 121 MDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL 175
Query: 417 YVAPE---YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 251 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 295
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL R + + ++ G + I +
Sbjct: 296 YVERM---NYVHRDLRAANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWT 349
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 350 APEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
++ AIV ++ SL LH + + E++KL I IA A
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLHAS-----ETKFEMKKL-----IDIARQTARG 132
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L D + IGDFGL+ S + G+I
Sbjct: 133 MDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--GSIL 187
Query: 417 YVAPE---YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q+++ + + +A ++SA++
Sbjct: 287 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVSAVVLLYMATQISSAME 332
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H +L N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 333 YLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 386
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASK--SFMAECKALKNIRHKNLVRVITS 296
IG GSFG+VYKG + D VA+K++N+ + +F E L+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ AIV ++ SL LH + + E++KL I IA A
Sbjct: 89 STKPQL------AIVTQWCEGSSLYHHLHAS-----ETKFEMKKL-----IDIARQTARG 132
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+DYLH + I+H DLK +NI L D + IGDFGL+ S + G+I
Sbjct: 133 MDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--GSIL 187
Query: 417 YVAPE---YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE + S DVY++GI+L E++T + P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + ++ +AS +
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETG---------KYLRLPQLVDMSAQIASGMA 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 126 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERMN---YVHRDLAAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM GSL +L + + L L Q + ++ +AS +
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETG---------KYLRLPQLVDMSAQIASGMA 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 126 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 326 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 371
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H +L N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 372 YLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 425
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIR 286
AT + IGVG++G+VYK G VA+K + + +G S + E L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 287 ---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
H N+VR++ C++ +V++++ + L +L D P E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVS 401
Q + LD+LH +C I+H DLKP NIL+ + + + DFGL+R YQ
Sbjct: 119 RQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
+P V T+ Y APE L S +T D++S G + EM K
Sbjct: 169 DPVVV-------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM G L +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVMEYMSKGCLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G +G VY+GV+ + VA+K + + + F+ E +K I+H NLV+++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ F I+ ++M G+L +L RE Q++ + + +A ++SA++
Sbjct: 284 ----REPPF-YIITEFMTYGNLLDYL---------RECNRQEVNAVVLLYMATQISSAME 329
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + + +H +L N L+ + + DFGLSR ++ T ++ G + I +
Sbjct: 330 YLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 383
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE ++ S DV+++G+LL E+ T
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ T VAIK + + ++F+ E + +K +RH+ LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
IV +YM G L +L + + L L Q + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGCLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMA 128
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + +H DL+ +NIL+ +L + DFGL+R + + ++ G + I +
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWT 182
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE L + DV+S+GILL E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 82 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 128
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 129 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 184
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 109 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 155
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 156 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 211
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 83 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 129
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 130 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 185
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 124
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 180
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 85 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 131
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 132 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 187
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 84 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 130
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 131 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 186
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 142
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 143 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 198
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 77 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 123
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 124 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 179
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 127
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 128 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 183
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 76 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 122
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 123 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 178
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 142
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 143 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 198
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 124
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 180
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 27/221 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ + +G G++G VYK D G +VA+K I L + +G + + E LK + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
N+V +I S +V+++M L+K L + +D +I+I LL+ ++
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ HQH ILH DLKP N+L+++D + + DFGL+R A P S +
Sbjct: 134 ----------HCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYT 177
Query: 409 IGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTK 448
V T+ Y AP+ +GS + ST+ D++S G + EM+T K
Sbjct: 178 HEV-VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 239 IGVGSFGSV-----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
+G G+FG V Y +D +VA+K + A K F E + L N++H+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAIPQRDREIEIQK--LTLLQRIS 348
C D +V++YM +G L K+L PDA+ D + K L L Q +
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
IA +AS + YL + +H DL N L+ +L IGDFG+SR + V
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ I ++ PE + + +T DV+S+G++L E+ T K
Sbjct: 195 TML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 27/221 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ + +G G++G VYK D G +VA+K I L + +G + + E LK + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
N+V +I S +V+++M L+K L + +D +I+I LL+ ++
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ HQH ILH DLKP N+L+++D + + DFGL+R A P S +
Sbjct: 134 ----------HCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYT 177
Query: 409 IGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTK 448
V T+ Y AP+ +GS + ST+ D++S G + EM+T K
Sbjct: 178 HEV-VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIR 286
AT + IGVG++G+VYK G VA+K + + +G S + E L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 287 ---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
H N+VR++ C++ +V++++ + L +L D P E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVS 401
Q + LD+LH +C I+H DLKP NIL+ + + + DFGL+R YQ
Sbjct: 119 RQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
P V T+ Y APE L S +T D++S G + EM K
Sbjct: 169 APVVV-------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 33/218 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 79 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 125
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF------YQAVSNPTVSSS 408
++YL + +H +L NIL++N+ IGDFGL++ Y V P S
Sbjct: 126 KGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP- 181
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 182 ------IFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L A I + LLQ S +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHA-------ERIDHIKLLQYTS---QIC 127
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 128 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 183
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 31/219 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDGT---VVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IG G FG V G G VAIK + + + F++E + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE-IQKLTLLQRIS 348
V+T + V I+ ++M NGSL+ +L Q D + IQ + +L+ I+
Sbjct: 99 LEGVVTKSTPV--------MIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIA 145
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA-VSNPTVSS 407
+ + ++Y+H+ DL NIL++++L + DFGLSRF + S+PT +S
Sbjct: 146 AGMKYLADMNYVHR---------DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 196
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
++G + I + APE + ++ DV+SYGI++ E+++
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +++P GSL ++L Q+ +E I + LLQ S +
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYL------QKHKE-RIDHIKLLQYTS---QIC 127
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++YL + +H DL NIL++N+ IGDFGL++ G
Sbjct: 128 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESP 183
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIR 286
AT + IGVG++G+VYK G VA+K + + +G S + E L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 287 ---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
H N+VR++ C++ +V++++ + L +L D P E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVS 401
Q + LD+LH +C I+H DLKP NIL+ + + + DFGL+R YQ
Sbjct: 119 RQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
P V T+ Y APE L S +T D++S G + EM K
Sbjct: 169 FPVVV-------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 33/218 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G VVA+K + + + F E + LK+++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C S G ++ +Y+P GSL +L Q+ +E I + LLQ S +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL------QKHKE-RIDHIKLLQYTS---QIC 124
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF------YQAVSNPTVSSS 408
++YL + +H DL NIL++N+ IGDFGL++ + V P S
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP- 180
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I + APE S+ S DV+S+G++L E+ T
Sbjct: 181 ------IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 70 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 114
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 115 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFP 168
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 71 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 115
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 116 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFP 169
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 239 IGVGSFGSV-----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
+G G+FG V Y ++D +VA+K + A K F E + L N++H+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAIPQRDREIEIQKLTLLQRISIA 350
C D +V++YM +G L K+L PDA+ + + LT Q + IA
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIA 134
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+A+ + YL + +H DL N L+ +L IGDFG+SR + V
Sbjct: 135 QQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ I ++ PE + + +T DV+S G++L E+ T K
Sbjct: 192 L--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 86 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 130
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 131 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFP 184
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 66 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 110
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 111 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFP 164
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 77 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 122 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFP 175
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 86 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 130
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS+G +
Sbjct: 131 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEETSSVGSKFP 184
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS---KSFMAECKALKNI-RHKNLVR 292
++IG G+FG V K +DG + + ++ + + F E + L + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-----LTLLQRI 347
++ +C + +G + AI +Y P+G+L +L + + D I L+ Q +
Sbjct: 81 LLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A DVA +DYL Q+ +H DL NIL+ + A I DFGLSR + T+
Sbjct: 136 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 191
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++A E S +TN DV+SYG+LL E+V+
Sbjct: 192 ----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS---KSFMAECKALKNI-RHKNLVR 292
++IG G+FG V K +DG + + ++ + + F E + L + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-----LTLLQRI 347
++ +C + +G + AI +Y P+G+L +L + + D I L+ Q +
Sbjct: 91 LLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A DVA +DYL Q+ +H DL NIL+ + A I DFGLSR + T+
Sbjct: 146 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 201
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++A E S +TN DV+SYG+LL E+V+
Sbjct: 202 ----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM--------AECK 280
AT + IGVG++G+VYK G VA+K + + G + A +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
L+ H N+VR++ C++ +V++++ + L +L D P E K
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIK 123
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQ 398
+ Q + LD+LH +C I+H DLKP NIL+ + + + DFGL+R YQ
Sbjct: 124 DLMRQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 173
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
P V T+ Y APE L S +T D++S G + EM K
Sbjct: 174 MALTPVVV-------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 141
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V ++G +D VAIK+I + + F+ E K + N+ H+ LV++
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C+ Q F I+ +YM NG L +L RE+ + Q + + DV
Sbjct: 71 GVCTK---QRPIF--IITEYMANGCLLNYL---------REMR-HRFQTQQLLEMCKDVC 115
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
A++YL + LH DL N L+++ + DFGLSR+ V + +SS G +
Sbjct: 116 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSRGSKFP 169
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ + PE + S+ S+ D++++G+L+ E+ + K
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS---KSFMAECKALKNI-RHKNLVR 292
++IG G+FG V K +DG + + ++ + + F E + L + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-----LTLLQRI 347
++ +C + +G + AI +Y P+G+L +L + + D I L+ Q +
Sbjct: 88 LLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A DVA +DYL Q+ +H +L NIL+ + A I DFGLSR + T+
Sbjct: 143 HFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 198
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++A E S +TN DV+SYG+LL E+V+
Sbjct: 199 ----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 237 NLIGVGSFGSVYKG-VFDEDGTV--VAIKVINLQR--QGASKSFMAECKALKNIRHKNLV 291
++G G FGSV +G + EDGT VA+K + L Q + F++E +K+ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
R++ C + QG ++ +M G L +L + + I +Q L + +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-----LKFMV 154
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
D+A ++YL LH DL N +L +D++ + DFGLS+ + S
Sbjct: 155 DIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSK--KIYSGDYYRQGRIA 209
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++A E ++ DV+++G+ + E+ T
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 237 NLIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVR 292
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ C + +V YM +G L ++ E T+ I +
Sbjct: 94 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQ 139
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
VA + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 140 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 115 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 160
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 234 SSTNLIGVGSFGSVYKGVFD----EDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHK 288
+ +IG G FG VYKG+ + VAIK + + F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT-LLQRI 347
N++R+ S I+ +YM NG+L+K+L ++D E + +L +L+ I
Sbjct: 107 NIIRLEGVISKYKPM-----MIITEYMENGALDKFLR-----EKDGEFSVLQLVGMLRGI 156
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + + ++Y+H+ DL NIL++++L + DFGLSR + T ++
Sbjct: 157 AAGMKYLANMNYVHR---------DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
S G + I + APE + ++ DV+S+GI++ E++T
Sbjct: 208 S-GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 237 NLIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVR 292
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ C + +V YM +G L ++ E T+ I +
Sbjct: 88 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQ 133
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
VA + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 134 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 31/219 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDGT---VVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IG G FG V G G VAIK + + + F++E + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE-IQKLTLLQRIS 348
V+T + V I+ ++M NGSL+ +L Q D + IQ + +L+ I+
Sbjct: 73 LEGVVTKSTPV--------MIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIA 119
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA-VSNPTVSS 407
+ + ++Y+H+ L NIL++++L + DFGLSRF + S+PT +S
Sbjct: 120 AGMKYLADMNYVHRA---------LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
++G + I + APE + ++ DV+SYGI++ E+++
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 237 NLIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVR 292
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ C + +V YM +G L ++ E T+ I +
Sbjct: 91 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQ 136
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
VA + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 137 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITS 296
++G G+FG V K + VAIK I + + K+F+ E + L + H N+V++ +
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD--VAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
C + +V +Y GSL LH A P + T +S + +
Sbjct: 70 CLNP-------VCLVMEYAEGGSLYNVLH-GAEP-------LPYYTAAHAMSWCLQCSQG 114
Query: 357 LDYLHQHCQEPILHCDLKPSNILL-DNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YLH + ++H DLKP N+LL I DFG + Q + +G+
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNKGSA 167
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
++APE GS S DV+S+GI+L E++T +KP D
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 116 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 161
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 142
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 141
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 237 NLIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVR 292
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ C + +V YM +G L ++ E T+ I +
Sbjct: 93 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQ 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
VA + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 139 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITS 296
++G G+FG V K + VAIK ++ + K+F+ E + L + H N+V++ +
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
C + +V +Y GSL LH A P + T +S + +
Sbjct: 71 CLNP-------VCLVMEYAEGGSLYNVLH-GAEP-------LPYYTAAHAMSWCLQCSQG 115
Query: 357 LDYLHQHCQEPILHCDLKPSNILL-DNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YLH + ++H DLKP N+LL I DFG + Q + +G+
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNKGSA 168
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
++APE GS S DV+S+GI+L E++T +KP D
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 142
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + YL + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 29/230 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL-QRQGASKSFMAECKALKNIRHKNLV 291
F +G G FG V++ D AIK I L R+ A + M E KAL + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 292 RVITSC----SSVDFQGNDFKAIVYKYMP---NGSLEKWLHPD-AIPQRDREIEIQKLTL 343
R + ++ Q + K +Y M +L+ W++ I +R+R + +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH---- 122
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL------SRFY 397
I + +A A+++LH + ++H DLKPSNI D +GDFGL
Sbjct: 123 -----IFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 398 QAVSN--PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
Q V P + G GT Y++PE G+ S D++S G++L E++
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ + T VA+K + ++F+ E +K ++H LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ I+ +YM GSL +L D E K+ L + I + +A +
Sbjct: 79 R-----EEPIYIITEYMAKGSLLDFLKSD---------EGGKVLLPKLIDFSAQIAEGMA 124
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + + +H DL+ +N+L+ L I DFGL+R + + ++ G + I +
Sbjct: 125 YIER---KNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 178
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
APE + DV+S+GILL E+VT K
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--ECKALKN 284
++ + + IG GSFG EDG IK IN+ R + + + E L N
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
++H N+V+ S F+ N IV Y G L K I QK L
Sbjct: 80 MKHPNIVQYRES-----FEENGSLYIVMDYCEGGDLFK------------RINAQKGVLF 122
Query: 345 QRISIA---IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
Q I + + AL ++H ILH D+K NI L D + +GDFG++R V
Sbjct: 123 QEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR----VL 175
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
N TV + GT Y++PE + D+++ G +L E+ T K
Sbjct: 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 19/220 (8%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
+G G+FG V+ + ++D +VA+K + + A + F E + L ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDA-IPQRDREIEIQKLTLLQRISI 349
C+ +G +V++YM +G L ++L PDA + ++ L L Q +++
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A VA+ + YL +H DL N L+ L IGDFG+SR + V
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ I ++ PE L + +T DV+S+G++L E+ T K
Sbjct: 221 ML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ +++ T VA+K + ++F+AE +K ++H LV++ +
Sbjct: 23 LGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
I+ ++M GSL +L D E K L + I + +A +
Sbjct: 81 KEPIY------IITEFMAKGSLLDFLKSD---------EGSKQPLPKLIDFSAQIAEGMA 125
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
++ Q +H DL+ +NIL+ L I DFGL+R + + ++ G + I +
Sbjct: 126 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 179
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL+E+VT
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGV-FDEDGTVVAIKVINLQ--RQGASKSFMA 277
M L +A + IG G++G V+K G VA+K + +Q +G S +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 278 ECKALKNIR---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR 334
E L+++ H N+VR+ C+ +V++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 335 EIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
E K + Q + LD+LH H ++H DLKP NIL+ + + DFGL+
Sbjct: 118 PTETIKDMMFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
R Y S +S+ V T+ Y APE L S +T D++S G + EM K
Sbjct: 168 RIY---SFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGV-FDEDGTVVAIKVINLQ--RQGASKSFMA 277
M L +A + IG G++G V+K G VA+K + +Q +G S +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 278 ECKALKNIR---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR 334
E L+++ H N+VR+ C+ +V++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 335 EIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
E K + Q + LD+LH H ++H DLKP NIL+ + + DFGL+
Sbjct: 118 PTETIKDMMFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
R Y S +S+ V T+ Y APE L S +T D++S G + EM K
Sbjct: 168 RIY---SFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 19/220 (8%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
+G G+FG V+ + ++D +VA+K + + A + F E + L ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDA-IPQRDREIEIQKLTLLQRISI 349
C+ +G +V++YM +G L ++L PDA + ++ L L Q +++
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A VA+ + YL +H DL N L+ L IGDFG+SR + V
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ I ++ PE L + +T DV+S+G++L E+ T K
Sbjct: 192 ML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGV-FDEDGTVVAIKVINLQ--RQGASKSFMA 277
M L +A + IG G++G V+K G VA+K + +Q +G S +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 278 ECKALKNIR---HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR 334
E L+++ H N+VR+ C+ +V++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 335 EIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
E K + Q + LD+LH H ++H DLKP NIL+ + + DFGL+
Sbjct: 118 PTETIKDMMFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
R Y S +S+ V T+ Y APE L S +T D++S G + EM K
Sbjct: 168 RIY---SFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 143
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 102 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 147
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 148 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 156 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 201
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 202 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 142
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 140
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 141 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 19/220 (8%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
+G G+FG V+ + ++D +VA+K + + A + F E + L ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDA-IPQRDREIEIQKLTLLQRISI 349
C+ +G +V++YM +G L ++L PDA + ++ L L Q +++
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A VA+ + YL +H DL N L+ L IGDFG+SR + V
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ I ++ PE L + +T DV+S+G++L E+ T K
Sbjct: 198 ML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ +++ T VA+K + ++F+AE +K ++H LV++ +
Sbjct: 196 LGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
I+ ++M GSL +L D E K L + I + +A +
Sbjct: 254 KEPIY------IITEFMAKGSLLDFLKSD---------EGSKQPLPKLIDFSAQIAEGMA 298
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
++ Q +H DL+ +NIL+ L I DFGL+R + + ++ G + I +
Sbjct: 299 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 352
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL+E+VT
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 142
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 238 LIGVGSFGSVYKG-VFDEDGTVVAIKVINLQRQ---GASKSFMAECKALKNIRHKNLVRV 293
+IG G FG VY G + D DG + V +L R G F+ E +K+ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ C + +V YM +G L ++ E T+ I + V
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN----------ETHNPTVKDLIGFGLQV 143
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
A + +L + +H DL N +LD + + DFGL+R +V + G +
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ ++A E + +T DV+S+G+LL E++T P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 27/208 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G FG V G D G VA+K I + +++F+AE + +RH NLV+++
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ +G + IV +YM GSL D + R R + + LL+ ++DV A++
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSL-----VDYLRSRGRSV-LGGDCLLK---FSLDVCEAME 131
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + +H DL N+L+ D A + DFGL++ S+ + + V+ T
Sbjct: 132 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWT---- 181
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + ST DV+S+GILL E+ +
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 30/234 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTV----VAIKVINLQRQG--ASKSFMAEC 279
+LK T+ ++G G+FG+VYKG++ +G VAIK++N + G A+ FM E
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEA 91
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
+ ++ H +LVR++ C S Q +V + MP+G L +++H + I Q
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-----EHKDNIGSQ 140
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L ++ + +A + YL + ++H DL N+L+ + I DFGL+R +
Sbjct: 141 LL-----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ ++ G + I ++A E + + DV+SYG+ + E++T KP D
Sbjct: 193 --DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G FG V G D G VA+K I + +++F+AE + +RH NLV+++
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ +G + IV +YM GSL D + R R + + LL+ ++DV A++
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSL-----VDYLRSRGRSV-LGGDCLLK---FSLDVCEAME 116
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + +H DL N+L+ D A + DFGL++ S+ + + V+ T
Sbjct: 117 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWT---- 166
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEM 444
APE + ST DV+S+GILL E+
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 30/234 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTV----VAIKVINLQRQG--ASKSFMAEC 279
+LK T+ ++G G+FG+VYKG++ +G VAIK++N + G A+ FM E
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEA 68
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
+ ++ H +LVR++ C S Q +V + MP+G L +++H + I Q
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-----EHKDNIGSQ 117
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L ++ + +A + YL + ++H DL N+L+ + I DFGL+R +
Sbjct: 118 LL-----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ ++ G + I ++A E + + DV+SYG+ + E++T KP D
Sbjct: 170 --DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G FG V G D G VA+K I + +++F+AE + +RH NLV+++
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ +G + IV +YM GSL +L R R + L + S+ DV A++
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYL-------RSRGRSVLGGDCLLKFSL--DVCEAME 303
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + +H DL N+L+ D A + DFGL++ S+ + + V+ T
Sbjct: 304 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWT---- 353
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEM 444
APE + ST DV+S+GILL E+
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEI 379
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G + K E
Sbjct: 63 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK--------------E 103
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 161 -----VHAPS-SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G FG V G D G VA+K I + +++F+AE + +RH NLV+++
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ +G + IV +YM GSL +L R R + L + S+ DV A++
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYL-------RSRGRSVLGGDCLLKFSL--DVCEAME 122
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YL + +H DL N+L+ D A + DFGL++ S+ + + V+ T
Sbjct: 123 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWT---- 172
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEM 444
APE + ST DV+S+GILL E+
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G + K E
Sbjct: 63 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK--------------E 103
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 161 -----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 237 NLIGVGSFGSVYKGVF--DEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+IG+G FG VY+ + DE A + ++ E K ++H N++ +
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C +V ++ G L + L IP +L ++ A+ +A
Sbjct: 73 GVCLK-----EPNLCLVMEFARGGPLNRVLSGKRIPP----------DIL--VNWAVQIA 115
Query: 355 SALDYLHQHCQEPILHCDLKPSNILL-----DNDLS---AHIGDFGLSRFYQAVSNPTVS 406
++YLH PI+H DLK SNIL+ + DLS I DFGL+R + +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR------T 169
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + G ++APE S S DV+SYG+LL E++T + P
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 203 SRPSRQPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIK 262
S P P E + K + S K A + F +G G FG+VY + ++A+K
Sbjct: 7 SAPENNPEEELASKQKNEESKKRQW-ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 263 VI---NLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGS 319
V+ L++ G E + ++RH N++R+ F ++ +Y P G+
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGT 120
Query: 320 LEKWLHPDAIPQRDREIEIQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPS 376
+ + E+QKL+ QR + I ++A+AL Y H + ++H D+KP
Sbjct: 121 VYR--------------ELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPE 163
Query: 377 NILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYS 436
N+LL + I DFG S V P+ S + GT+ Y+ PE G D++S
Sbjct: 164 NLLLGSAGELKIADFGWS-----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 437 YGILLLEMVTTKKP 450
G+L E + K P
Sbjct: 218 LGVLCYEFLVGKPP 231
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDGT---VVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IGVG FG V G G VAIK + + F++E + H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V+T C V I+ +YM NGSL+ +L + + T++Q + +
Sbjct: 95 LEGVVTKCKPV--------MIITEYMENGSLDAFLRKND----------GRFTVIQLVGM 136
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S + YL +H DL NIL++++L + DFG+SR + +P + ++
Sbjct: 137 LRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLE--DDPEAAYTT 191
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE + ++ DV+SYGI++ E+++
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR---QGASKSFMAECKALKNIRHKNLVRV 293
+ +GVG+FG V G G VA+K++N Q+ E + LK RH +++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
S+ DF +V +Y+ G L D I + R E++ L Q+I
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELF-----DYICKHGRVEEMEARRLFQQI------ 120
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
SA+DY H+H ++H DLKP N+LLD ++A I DFGLS S G
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC-----G 172
Query: 414 TIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
+ Y APE G D++S G++L ++ P D
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 102
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 103 PLIK--SYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 154
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 155 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 102
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 103 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 154
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 155 VPVRTYTHEV-VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKN 284
L + + F IG G++G VYK G VVA+K I L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 285 IRHKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
+ H N+V+++ + +F D K K+M +L IP
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP------- 104
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 105 ---LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF 156
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 GVPVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ G ++ + T VA+K + ++F+ E +K ++H LVR+ +
Sbjct: 20 LGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ I+ ++M GSL +L D E K+ L + I + +A +
Sbjct: 78 K-----EEPIYIITEFMAKGSLLDFLKSD---------EGGKVLLPKLIDFSAQIAEGMA 123
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
Y+ + + +H DL+ +N+L+ L I DFGL+R + + ++ G + I +
Sbjct: 124 YIER---KNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 177
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
APE + +V+S+GILL E+VT K
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGK 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 109
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 110 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 161
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 162 VPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKN 284
L + + F IG G++G VYK G VVA+K I L + +G + + E LK
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 285 IRHKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
+ H N+V+++ + +F D K K+M +L IP
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP------- 105
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 106 ---LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF 157
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 158 GVPVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 102
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 103 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 154
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 155 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 101
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 102 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 153
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 154 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 34/223 (15%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR---QGASKSFMAECKALKNIRHKNLVRV 293
+ +GVG+FG V G G VA+K++N Q+ E + LK RH +++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
S+ DF +V +Y+ G L D I + R E++ L Q+I
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELF-----DYICKHGRVEEMEARRLFQQI------ 120
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
SA+DY H+H ++H DLKP N+LLD ++A I DFGLS +S +R
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM--------MSDGEFLRD 169
Query: 414 TIG---YVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
+ G Y APE G D++S G++L ++ P D
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 101
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 102 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 153
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 154 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 102
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 103 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-G 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
V T + + T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 VPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDGT---VVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IGVG FG V G G VAIK + + F++E + H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V+T C V I+ +YM NGSL+ +L + + T++Q + +
Sbjct: 74 LEGVVTKCKPV--------MIITEYMENGSLDAFLRKND----------GRFTVIQLVGM 115
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S + YL +H DL NIL++++L + DFG+SR + +P + ++
Sbjct: 116 LRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE--DDPEAAYTT 170
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE + ++ DV+SYGI++ E+++
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 109
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 110 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 161
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 162 VPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G FG V+ +++ T VA+K + ++F+AE +K ++H LV++ +
Sbjct: 190 LGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
I+ ++M GSL +L D E K L + I + +A +
Sbjct: 248 KEPI------YIITEFMAKGSLLDFLKSD---------EGSKQPLPKLIDFSAQIAEGMA 292
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
++ Q +H DL+ +NIL+ L I DFGL+R +G + I +
Sbjct: 293 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR-------------VGAKFPIKWT 336
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVT 446
APE + DV+S+GILL+E+VT
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDGT---VVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IGVG FG V G G VAIK + + F++E + H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V+T C V I+ +YM NGSL+ +L + + T++Q + +
Sbjct: 80 LEGVVTKCKPV--------MIITEYMENGSLDAFLRKND----------GRFTVIQLVGM 121
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S + YL +H DL NIL++++L + DFG+SR + +P + ++
Sbjct: 122 LRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE--DDPEAAYTT 176
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE + ++ DV+SYGI++ E+++
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 102
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 103 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 154
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 155 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 106
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R + V
Sbjct: 107 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVP 160
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
T + + T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 161 VRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 203 SRPSRQPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIK 262
S P P E + K + S K A + F +G G FG+VY + ++A+K
Sbjct: 7 SAPENNPEEELASKQKNEESKKRQW-ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 263 VI---NLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGS 319
V+ L++ G E + ++RH N++R+ F ++ +Y P G+
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGT 120
Query: 320 LEKWLHPDAIPQRDREIEIQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPS 376
+ + E+QKL+ QR + I ++A+AL Y H + ++H D+KP
Sbjct: 121 VYR--------------ELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPE 163
Query: 377 NILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYS 436
N+LL + I DFG S V P+ S + GT+ Y+ PE G D++S
Sbjct: 164 NLLLGSAGELKIADFGWS-----VHAPS-SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 437 YGILLLEMVTTKKP 450
G+L E + K P
Sbjct: 218 LGVLCYEFLVGKPP 231
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKN 284
L + + F IG G++G VYK G VVA+K I L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 285 IRHKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
+ H N+V+++ + +F D K K+M +L IP
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLK----KFMDASALT------GIP------- 104
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 105 ---LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF 156
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 GVPVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHKNLVRVIT 295
IG G FG V+ G + ++D VAIK I R+GA + F+ E + + + H LV++
Sbjct: 18 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVAS 355
C +V+++M +G L +L R + TLL + +DV
Sbjct: 73 VCLE-----QAPICLVFEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCE 117
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YL + C ++H DL N L+ + + DFG++RF V + +SS G + +
Sbjct: 118 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPV 171
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ +PE S S+ DV+S+G+L+ E+ + K
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 103
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 104 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV 157
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 158 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRVITSC 297
IG G+FG V+ G D T+VA+K K+ F+ E + LK H N+VR+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
+ IV + + G +L + R + TLLQ + D A+ +
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLRTEGARLRVK-------TLLQMVG---DAAAGM 226
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT-IG 416
+YL C +H DL N L+ I DFG+SR ++ ++S G+R +
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVK 280
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ APE S+ DV+S+GILL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 103
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 104 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 158 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G FG V +KG +D VA+K+I + + F E + + + H LV+
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----VAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 295 TSCSSVDFQGNDFKA-IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
CS ++ IV +Y+ NG L +L + L Q + + DV
Sbjct: 70 GVCS------KEYPIYIVTEYISNGCLLNYLRSHG----------KGLEPSQLLEMCYDV 113
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
+ +L H +H DL N L+D DL + DFG++R+ V + SS+G +
Sbjct: 114 CEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY---VLDDQYVSSVGTKF 167
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTT-KKPTD 452
+ + APE + S+ DV+++GIL+ E+ + K P D
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHKNLVRVIT 295
IG G FG V+ G + ++D VAIK I R+GA + F+ E + + + H LV++
Sbjct: 13 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVAS 355
C +V+++M +G L +L R + TLL + +DV
Sbjct: 68 VCLE-----QAPICLVFEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCE 112
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YL + C ++H DL N L+ + + DFG++RF V + +SS G + +
Sbjct: 113 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPV 166
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ +PE S S+ DV+S+G+L+ E+ + K
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 101
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 103
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 104 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 158 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHKNLVRVIT 295
IG G FG V+ G + ++D VAIK I R+GA + F+ E + + + H LV++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVAS 355
C +V+++M +G L +L R + TLL + +DV
Sbjct: 70 VCLE-----QAPICLVFEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCE 114
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YL + C ++H DL N L+ + + DFG++RF V + +SS G + +
Sbjct: 115 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPV 168
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ +PE S S+ DV+S+G+L+ E+ + K
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKS----FMAECKALKNIRHKNLVRVI 294
IG GSF +VYKG+ E T V + LQ + +KS F E + LK ++H N+VR
Sbjct: 34 IGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
S S +G +V + +G+L+ +L + ++ K+ +L+ S +
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYL---------KRFKVXKIKVLR--SWCRQIL 139
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDL-SAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
L +LH PI+H DLK NI + S IGD GL+ +A S + V G
Sbjct: 140 KGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA------SFAKAVIG 192
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T + APE + + DVY++G LE T++ P
Sbjct: 193 TPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRVITSC 297
IG G+FG V+ G D T+VA+K K+ F+ E + LK H N+VR+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
+ IV + + G +L + R + TLLQ + D A+ +
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLRTEGARLRVK-------TLLQMVG---DAAAGM 226
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT-IG 416
+YL C +H DL N L+ I DFG+SR ++ ++S G+R +
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVK 280
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ APE S+ DV+S+GILL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 102
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 103 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 156
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 101
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 101
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 RTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 102
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 103 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV 156
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 45/237 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F LIG G FG V+K DG I+ + + A + E KAL + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 293 VITSCSSVDF---------QGNDFKA---------------IVYKYMPNGSLEKWLHPDA 328
D+ + +D+ I ++ G+LE+W+
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 329 IPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHI 388
+ D+ + L L ++I+ +DY+H + ++H DLKPSNI L + I
Sbjct: 130 GEKLDK---VLALELFEQIT------KGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKI 177
Query: 389 GDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
GDFGL + T S +GT+ Y++PE + D+Y+ G++L E++
Sbjct: 178 GDFGLVTSLKNDGKRTRS-----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 104
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 105 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 159 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F LIG G FG V+K DG IK + + A + E KAL + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 293 VITSCSSVDFQ-----GNDFKA------IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
D+ N ++ I ++ G+LE+W+ + D+ + L
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK---VLAL 125
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L ++I+ +DY+H + +++ DLKPSNI L + IGDFGL S
Sbjct: 126 ELFEQIT------KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL-----VTS 171
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+GT+ Y++PE + D+Y+ G++L E++
Sbjct: 172 LKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 101
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G++ + E
Sbjct: 61 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------E 101
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 -----VHAPS-SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP--------- 101
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 101
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 RTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G++ + E
Sbjct: 61 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------E 101
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 -----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G++ + E
Sbjct: 61 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------E 101
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 -----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G++ + E
Sbjct: 63 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------E 103
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 161 -----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 103
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 104 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 159 RTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKN 289
+ +G GSFG V G VA+K+IN L + E L+ +RH +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++++ S D +V +Y N D I QRD+ E + Q+I
Sbjct: 76 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQEARRFFQQI-- 122
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
SA++Y H+H I+H DLKP N+LLD L+ I DFGLS + S
Sbjct: 123 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-- 173
Query: 410 GVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
G+ Y APE G DV+S G++L M+ + P D
Sbjct: 174 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F + ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K K+M +L IP
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLK----KFMDASALT------GIP--------- 102
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 103 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV 156
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 111
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 112 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 163
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 164 PS-SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKN 289
+ +G GSFG V G VA+K+IN L + E L+ +RH +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++++ S D +V +Y N D I QRD+ E + Q+I
Sbjct: 75 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQEARRFFQQI-- 121
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
SA++Y H+H I+H DLKP N+LLD L+ I DFGLS + S
Sbjct: 122 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-- 172
Query: 410 GVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
G+ Y APE G DV+S G++L M+ + P D
Sbjct: 173 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 109
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 110 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 161
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 162 PS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 29/224 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKN 289
+ +G GSFG V G VA+K+IN L + E L+ +RH +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++++ S D +V +Y N D I QRD+ E + Q+I
Sbjct: 66 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQEARRFFQQI-- 112
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
SA++Y H+H I+H DLKP N+LLD L+ I DFGLS + S
Sbjct: 113 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-- 163
Query: 410 GVRGTIGYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
G+ Y APE G + DV+S G++L M+ + P D
Sbjct: 164 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 102/239 (42%), Gaps = 48/239 (20%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI----- 285
D LIG G +G+VYKG DE VA+KV + + ++F+ E KNI
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSFANR---QNFINE----KNIYRVPL 63
Query: 286 -RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
H N+ R I V G +V +Y PNGSL K+L + +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------------SLHTSDWV 111
Query: 345 QRISIAIDVASALDYLH------QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
+A V L YLH H + I H DL N+L+ ND + I DFGLS +
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS--MR 169
Query: 399 AVSNPTV------SSSIGVRGTIGYVAPEYGLGS-------EVSTNGDVYSYGILLLEM 444
N V +++I GTI Y+APE G+ D+Y+ G++ E+
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKN 289
+ +G GSFG V G VA+K+IN L + E L+ +RH +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++++ S D +V +Y N D I QRD+ E + Q+I
Sbjct: 70 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQEARRFFQQI-- 116
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
SA++Y H+H I+H DLKP N+LLD L+ I DFGLS + S
Sbjct: 117 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-- 167
Query: 410 GVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
G+ Y APE G DV+S G++L M+ + P D
Sbjct: 168 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 107
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 108 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 159
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 160 PS-SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGAS-KSFMAECKALKNIRHKNLVRV 293
+G G FG V Y D G VA+K + + G E + L+N+ H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
C+ + GN K I+ +++P+GSL+++L + K+ L Q++ A+ +
Sbjct: 89 KGICT--EDGGNGIKLIM-EFLPSGSLKEYLPKNK----------NKINLKQQLKYAVQI 135
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
+DYL +H DL N+L++++ IGDFGL++ + +
Sbjct: 136 CKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDS 191
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE + S+ DV+S+G+ L E++T
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 106
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 107 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 105
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 106 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 157
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 158 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 110
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 111 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 162
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 163 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 111
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 112 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 163
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 164 PS-SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGAS-KSFMAECKALKNIRHKNLVRV 293
+G G FG V Y D G VA+K + + G E + L+N+ H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
C+ + GN K I+ +++P+GSL+++L + K+ L Q++ A+ +
Sbjct: 77 KGICT--EDGGNGIKLIM-EFLPSGSLKEYLPKNK----------NKINLKQQLKYAVQI 123
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
+DYL +H DL N+L++++ IGDFGL++ + +
Sbjct: 124 CKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDS 179
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE + S+ DV+S+G+ L E++T
Sbjct: 180 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 123
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 124 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 175
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 176 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 103
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 104 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 155
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 156 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 108
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 109 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 160
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 161 PS-SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 107
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S +
Sbjct: 108 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR 164
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T+S GT+ Y+ PE G D++S G+L E + K P
Sbjct: 165 TTLS------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDA---IPQRDREIEIQKLTL 343
H N+V+++ + + +V++++ + L+K++ A IP L L
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEHV-DQDLKKFMDASALTGIP----------LPL 107
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 108 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 163 YXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 141
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 142 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 196
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 197 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 131
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 132 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 186
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 187 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+ I L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 102
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 103 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 154
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 155 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+ I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
N+V+++ + +F D K K+M +L IP L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLK----KFMDASALT------GIP----------L 101
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R A
Sbjct: 102 PLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFG 153
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
P + + V T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 154 VPVRTYTHEV-VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL-----QRQGASKSFMAECKALKNIRH 287
+ + +G G F +VYK +VAIK I L + G +++ + E K L+ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N++ ++ + F ++V+ +M LE + +++ I+ L LQ
Sbjct: 72 PNIIGLLDA-----FGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQ-- 123
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
L+YLHQH ILH DLKP+N+LLD + + DFGL++ + + +
Sbjct: 124 --------GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMV 445
+ T Y APE G+ + G D+++ G +L E++
Sbjct: 173 VV----TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 114
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 115 -FTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLE- 169
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 170 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 109
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 110 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 161
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 162 PS-SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 107
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I DFG S V
Sbjct: 108 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-----VHA 159
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 160 PS-SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHKNLVRVIT 295
IG G FG V+ G + ++D VAIK I R+GA + F+ E + + + H LV++
Sbjct: 16 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVAS 355
C +V ++M +G L +L R + TLL + +DV
Sbjct: 71 VCLE-----QAPICLVTEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCE 115
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YL + C ++H DL N L+ + + DFG++RF V + +SS G + +
Sbjct: 116 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPV 169
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ +PE S S+ DV+S+G+L+ E+ + K
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMA 277
M K A + F +G G FG+VY + ++A+KV+ L++ G
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E + ++RH N++R+ F ++ +Y P G++ + E
Sbjct: 61 EVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------E 101
Query: 338 IQKLTLL--QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
+QKL+ QR + I ++A+AL Y H + ++H D+KP N+LL + I +FG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS 158
Query: 395 RFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 159 -----VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K +M +L IP
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKT----FMDASALT------GIP--------- 104
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 105 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 159 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 39/232 (16%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKN 284
L + + F IG G++G VYK G VVA+K I L + +G + + E LK
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 285 IRHKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
+ H N+V+++ + +F D K +M +L IP
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLK----DFMDASALT------GIP------- 103
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 104 ---LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF 155
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 GVPVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 39/232 (16%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKN 284
L + + F IG G++G VYK G VVA+K I L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 285 IRHKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
+ H N+V+++ + +F D K +M +L IP
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLK----DFMDASALT------GIP------- 104
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 105 ---LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF 156
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 157 GVPVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 217 ALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASK 273
AL +M + D F +G G FG+VY ++ ++A+KV+ L+++G
Sbjct: 2 ALAEMPKRKF--TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 274 SFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRD 333
E + ++RH N++R+ F ++ ++ P G L K L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQ-----KHG 109
Query: 334 REIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL 393
R E + T ++ ++A AL Y H+ ++H D+KP N+L+ I DFG
Sbjct: 110 RFDEQRSATFME------ELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGW 160
Query: 394 SRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
S V P++ GT+ Y+ PE G D++ G+L E + P D
Sbjct: 161 S-----VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 39/230 (16%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIR 286
+ + F IG G++G VYK G VVA+K I L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 287 HKNLVRVITSCSS-------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N+V+++ + +F D K +M +L IP
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLK----DFMDASALT------GIP--------- 101
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L L++ S + L + H H +LH DLKP N+L++ + + + DFGL+R +
Sbjct: 102 -LPLIK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV 155
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 156 PVRTYXHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGL+R +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 238 LIGVGSFGSVYKGVFDEDGTV---VAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR- 292
+IG G FG V G G VAIK + + + + F+ E + H N++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 293 --VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE-IQKLTLLQRISI 349
V+T V IV +YM NGSL+ +L + D + IQ + +L+ IS
Sbjct: 89 EGVVTKSKPV--------MIVTEYMENGSLDTFLK-----KNDGQFTVIQLVGMLRGISA 135
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S + Y+H+ DL NIL++++L + DFGLSR + +P + ++
Sbjct: 136 GMKYLSDMGYVHR---------DLAARNILINSNLVCKVSDFGLSRVLE--DDPEAAYTT 184
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE + ++ DV+SYGI++ E+V+
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 217 ALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASK 273
AL +M + D F +G G FG+VY ++ ++A+KV+ L+++G
Sbjct: 3 ALAEMPKRKF--TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 274 SFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRD 333
E + ++RH N++R+ F ++ ++ P G L K L +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQ-----KHG 110
Query: 334 REIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL 393
R E + T ++ ++A AL Y H+ ++H D+KP N+L+ I DFG
Sbjct: 111 RFDEQRSATFME------ELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGW 161
Query: 394 SRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
S V P++ GT+ Y+ PE G D++ G+L E + P D
Sbjct: 162 S-----VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIEL 63
N +G IP + + S L SL+L+ N+ G+IP +G+L LR + N L GEIP EL
Sbjct: 401 NGFTGKIPPTLSNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 64 GLCSSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEAL-SLEYLNLS 122
+LE + L N G IPS + + LS N L+G+IP ++ L +L L LS
Sbjct: 460 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Query: 123 FNDFEGKVPTK 133
N F G +P +
Sbjct: 520 NNSFSGNIPAE 530
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 4 NDLSGTIP-EAIFSISYLSNSLNLAENHFVGSIPPRIGNLKA-LRSFDVSNNGLSGEIPI 61
N+ SG +P + + + L L+L+ N F G +P + NL A L + D+S+N SG PI
Sbjct: 325 NNFSGELPMDTLLKMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG--PI 381
Query: 62 ELGLC----SSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-L 116
LC ++L+++YL N F G IP + L LS N LSG IP L +LS L
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 441
Query: 117 EYLNLSFNDFEGKVPTKGIFANTSAISVAGCHRLCGGIPELQLPKCT 163
L L N EG++P + ++ T + + L G IP L CT
Sbjct: 442 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS-GLSNCT 487
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 22 NSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHG 81
N N+ + G P N ++ D+S N LSG IP E+G L + LG N G
Sbjct: 608 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 82 SIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-LEYLNLSFNDFEGKVPTKGIFANTS 140
SIP RG+ LDLS N L G+IP + AL+ L ++LS N+ G +P G F
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 727
Query: 141 AISVAGCHRLCGGIPELQLPKC 162
LCG LP+C
Sbjct: 728 PAKFLNNPGLCG----YPLPRC 745
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 24 LNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHGSI 83
L L N F G IPP + N L S +S N LSG IP LG S L D+ L N G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 84 PSFFRTSRGIRKLDLSRNNLSGQIPLFL-EALSLEYLNLSFNDFEGKVP 131
P + + L L N+L+G+IP L +L +++LS N G++P
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIEL 63
NDL+G IP + + + L N ++L+ N G IP IG L+ L +SNN SG IP EL
Sbjct: 473 NDLTGEIPSGLSNCTNL-NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 64 GLCSSLEDIYLGGNFFHGSIP-SFFRTSRGI 93
G C SL + L N F+G+IP + F+ S I
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 562
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 1 MFENDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP 60
++ N L G IP+ + + L +L L N G IP + N L +SNN L+GEIP
Sbjct: 446 LWLNMLEGEIPQELMYVKTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 61 IELGLCSSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIP 108
+G +L + L N F G+IP+ R + LDL+ N +G IP
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MFENDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP 60
M N LSG IP+ I S+ YL LNL N GSIP +G+L+ L D+S+N L G IP
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLF-ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Query: 61 IELGLCSSLEDIYLGGNFFHGSIP 84
+ + L +I L N G IP
Sbjct: 695 QAMSALTMLTEIDLSNNNLSGPIP 718
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 24 LNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHGSI 83
L+++ N+F IP +G+ AL+ D+S N LSG+ + C+ L+ + + N F G I
Sbjct: 202 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 84 PSFFRTSRGIRKLDLSRNNLSGQIPLFLEAL--SLEYLNLSFNDFEGKVP 131
P + ++ L L+ N +G+IP FL +L L+LS N F G VP
Sbjct: 261 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 15 FSISYLSNSLNLAENHFVGSIPP--RIGNLKALRSFDVSNNGLSGEIPIELGL-CSSLED 71
F S SL+L+ N G + +G+ L+ +VS+N L + GL +SLE
Sbjct: 93 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 152
Query: 72 IYLGGNFFHGSIPSFFRTSRG---IRKLDLSRNNLSGQIPLFLEALSLEYLNLSFNDFEG 128
+ L N G+ + S G ++ L +S N +SG + + ++LE+L++S N+F
Sbjct: 153 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVS-RCVNLEFLDVSSNNFST 211
Query: 129 KVPTKGIFANTSAISVAGCHRLCGGIPELQLPKCTE----NKSSNQ 170
+P G + + ++G ++L G + CTE N SSNQ
Sbjct: 212 GIPFLGDCSALQHLDISG-NKLSGDFSR-AISTCTELKLLNISSNQ 255
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 48/177 (27%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP--- 60
N L+G IP+ I + L+ L L+ N F G+IP +G+ ++L D++ N +G IP
Sbjct: 497 NRLTGEIPKWIGRLENLA-ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 61 ------IELGLCSSLEDIYL-----------GGNF------------------------- 78
I + +Y+ GN
Sbjct: 556 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSR 615
Query: 79 -FHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-LEYLNLSFNDFEGKVPTK 133
+ G F + + LD+S N LSG IP + ++ L LNL ND G +P +
Sbjct: 616 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 672
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 73 YLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS---LEYLNLSFN--DFE 127
+L + +GS+ S F+ S + LDLSRN+LSG + S L++LN+S N DF
Sbjct: 80 FLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 138
Query: 128 GKV 130
GKV
Sbjct: 139 GKV 141
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 217 ALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASK 273
AL +M + D F +G G FG+VY ++ ++A+KV+ L+++G
Sbjct: 2 ALAEMPKRKF--TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 274 SFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRD 333
E + ++RH N++R+ F ++ ++ P G L K L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQ-----KHG 109
Query: 334 REIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL 393
R E + T ++ ++A AL Y H+ ++H D+KP N+L+ I DFG
Sbjct: 110 RFDEQRSATFME------ELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGW 160
Query: 394 SRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
S V P++ GT+ Y+ PE G D++ G+L E + P D
Sbjct: 161 S-----VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV +YM NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGL R +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNI 285
A + F +G G FG+VY + ++A+KV+ L++ G E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL- 344
RH N++R+ F ++ +Y P G++ + E+QKL+
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSKFD 108
Query: 345 -QRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
QR + I ++A+AL Y H + ++H D+KP N+LL + I +FG S V
Sbjct: 109 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS-----VHA 160
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
P+ S + GT+ Y+ PE G D++S G+L E + K P
Sbjct: 161 PS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITS 296
++G G FG K E G V+ +K + + ++F+ E K ++ + H N+++ I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI-- 73
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
V ++ I +Y+ G+L I D + QR+S A D+AS
Sbjct: 74 --GVLYKDKRLNFIT-EYIKGGTLR-----GIIKSMDSQYPWS-----QRVSFAKDIASG 120
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY----------QAVSNPTVS 406
+ YLH I+H DL N L+ + + + DFGL+R +++ P
Sbjct: 121 MAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
V G ++APE G DV+S+GI+L E++
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGA-SKSFMAECKALKNIR 286
+D + ++G G V+ D VA+KV+ +L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H +V V + + + IV +Y+ +L +H + +T +
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG-----------PMTPKRA 118
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + D AL++ HQ+ I+H D+KP+NI++ + + DFG++R N +V+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-SVT 174
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT Y++PE G V DVYS G +L E++T + P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGA-SKSFMAECKALKNIR 286
+D + ++G G V+ D VA+KV+ +L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H +V V + + + IV +Y+ +L +H + +T +
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG-----------PMTPKRA 118
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + D AL++ HQ+ I+H D+KP+NI++ + + DFG++R N +V+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-SVT 174
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT Y++PE G V DVYS G +L E++T + P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
+ F IG G++G VYK G VVA+K I L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDA---IPQRDREIEIQKLTLLQ 345
N+V+++ + + +V++++ + L+ ++ A IP L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEHV-HQDLKTFMDASALTGIP----------LPLIK 105
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
S + L + H H +LH DLKP N+L++ + + + DFGL+R + V T
Sbjct: 106 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTY 159
Query: 406 SSSIGVRGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVTTK 448
+ + T+ Y APE LG + ST D++S G + EMVT +
Sbjct: 160 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIEL 63
N +G IP + + S L SL+L+ N+ G+IP +G+L LR + N L GEIP EL
Sbjct: 404 NGFTGKIPPTLSNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 64 GLCSSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEAL-SLEYLNLS 122
+LE + L N G IPS + + LS N L+G+IP ++ L +L L LS
Sbjct: 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Query: 123 FNDFEGKVPTK 133
N F G +P +
Sbjct: 523 NNSFSGNIPAE 533
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 4 NDLSGTIP-EAIFSISYLSNSLNLAENHFVGSIPPRIGNLKA-LRSFDVSNNGLSGEIPI 61
N+ SG +P + + + L L+L+ N F G +P + NL A L + D+S+N SG PI
Sbjct: 328 NNFSGELPMDTLLKMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG--PI 384
Query: 62 ELGLC----SSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-L 116
LC ++L+++YL N F G IP + L LS N LSG IP L +LS L
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 444
Query: 117 EYLNLSFNDFEGKVPTKGIFANTSAISVAGCHRLCGGIPELQLPKCT 163
L L N EG++P + ++ T + + L G IP L CT
Sbjct: 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS-GLSNCT 490
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 22 NSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHG 81
N N+ + G P N ++ D+S N LSG IP E+G L + LG N G
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 82 SIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-LEYLNLSFNDFEGKVPTKGIFANTS 140
SIP RG+ LDLS N L G+IP + AL+ L ++LS N+ G +P G F
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 730
Query: 141 AISVAGCHRLCGGIPELQLPKC 162
LCG LP+C
Sbjct: 731 PAKFLNNPGLCG----YPLPRC 748
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 24 LNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHGSI 83
L L N F G IPP + N L S +S N LSG IP LG S L D+ L N G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 84 PSFFRTSRGIRKLDLSRNNLSGQIPLFL-EALSLEYLNLSFNDFEGKVP 131
P + + L L N+L+G+IP L +L +++LS N G++P
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIEL 63
NDL+G IP + + + L N ++L+ N G IP IG L+ L +SNN SG IP EL
Sbjct: 476 NDLTGEIPSGLSNCTNL-NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 64 GLCSSLEDIYLGGNFFHGSIP-SFFRTSRGI 93
G C SL + L N F+G+IP + F+ S I
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 1 MFENDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP 60
++ N L G IP+ + + L +L L N G IP + N L +SNN L+GEIP
Sbjct: 449 LWLNMLEGEIPQELMYVKTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 61 IELGLCSSLEDIYLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIP 108
+G +L + L N F G+IP+ R + LDL+ N +G IP
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MFENDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP 60
M N LSG IP+ I S+ YL LNL N GSIP +G+L+ L D+S+N L G IP
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLF-ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Query: 61 IELGLCSSLEDIYLGGNFFHGSIP 84
+ + L +I L N G IP
Sbjct: 698 QAMSALTMLTEIDLSNNNLSGPIP 721
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 24 LNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHGSI 83
L+++ N+F IP +G+ AL+ D+S N LSG+ + C+ L+ + + N F G I
Sbjct: 205 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 84 PSFFRTSRGIRKLDLSRNNLSGQIPLFLEAL--SLEYLNLSFNDFEGKVP 131
P + ++ L L+ N +G+IP FL +L L+LS N F G VP
Sbjct: 264 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 15 FSISYLSNSLNLAENHFVGSIPP--RIGNLKALRSFDVSNNGLSGEIPIELGL-CSSLED 71
F S SL+L+ N G + +G+ L+ +VS+N L + GL +SLE
Sbjct: 96 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155
Query: 72 IYLGGNFFHGSIPSFFRTSRG---IRKLDLSRNNLSGQIPLFLEALSLEYLNLSFNDFEG 128
+ L N G+ + S G ++ L +S N +SG + + ++LE+L++S N+F
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVS-RCVNLEFLDVSSNNFST 214
Query: 129 KVPTKGIFANTSAISVAGCHRLCGGIPELQLPKCTE----NKSSNQ 170
+P G + + ++G ++L G + CTE N SSNQ
Sbjct: 215 GIPFLGDCSALQHLDISG-NKLSGDFSR-AISTCTELKLLNISSNQ 258
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 48/177 (27%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIP--- 60
N L+G IP+ I + L+ L L+ N F G+IP +G+ ++L D++ N +G IP
Sbjct: 500 NRLTGEIPKWIGRLENLA-ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 61 ------IELGLCSSLEDIYL-----------GGNF------------------------- 78
I + +Y+ GN
Sbjct: 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSR 618
Query: 79 -FHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-LEYLNLSFNDFEGKVPTK 133
+ G F + + LD+S N LSG IP + ++ L LNL ND G +P +
Sbjct: 619 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 73 YLGGNFFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS---LEYLNLSFN--DFE 127
+L + +GS+ S F+ S + LDLSRN+LSG + S L++LN+S N DF
Sbjct: 83 FLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 141
Query: 128 GKV 130
GKV
Sbjct: 142 GKV 144
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSC 297
IG G FG V+ G + ++D VAIK I + + F+ E + + + H LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDK--VAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
+V+++M +G L +L R + TLL + +DV +
Sbjct: 92 LE-----QAPICLVFEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCEGM 136
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
YL + C ++H DL N L+ + + DFG++RF V + +SS G + + +
Sbjct: 137 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKW 190
Query: 418 VAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+PE S S+ DV+S+G+L+ E+ + K
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGA-SKSFMAECKALKNIR 286
+D + ++G G V+ D VA+KV+ +L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H +V V + + + IV +Y+ +L +H + +T +
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG-----------PMTPKRA 118
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + D AL++ HQ+ I+H D+KP+NIL+ + + DFG++R A S +V
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVX 174
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT Y++PE G V DVYS G +L E++T + P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 77 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 130
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE--- 184
Query: 403 PTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 185 -TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 68 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 121
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE--- 175
Query: 403 PTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 176 -TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 74 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 127
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 128 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 181
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 182 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 70 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 123
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 177
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 178 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 83 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 136
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 137 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 190
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 191 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 76 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 129
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 183
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 184 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR---QGASKSFMAECKALKNIRHKNLVR- 292
+ +GVG+FG V G + G VA+K++N Q+ E + LK RH ++++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 293 --VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
VI++ S + +V +Y+ G L D I + R E + L Q+I
Sbjct: 82 YQVISTPSDI--------FMVMEYVSGGELF-----DYICKNGRLDEKESRRLFQQI--- 125
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
S +DY H+H ++H DLKP N+LLD ++A I DFGLS +S
Sbjct: 126 ---LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM--------MSDGEF 171
Query: 411 VRGTIG---YVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTKKPTD 452
+R + G Y APE G D++S G++L ++ P D
Sbjct: 172 LRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 77 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 130
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 184
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 185 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRHKNLVRVIT 295
+G G FG+VY + ++A+KV+ L++ G E + ++RH N++R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL--QRISIAI-D 352
F ++ +Y P G++ + E+QKL+ QR + I +
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSRFDEQRTATYITE 120
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+A+AL Y H + ++H D+KP N+LL ++ I DFG S V P+ S +
Sbjct: 121 LANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPS-SRRTTLC 171
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+ PE G D++S G+L E + P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 105 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 158
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 159 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 212
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 213 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 239 IGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHKNLVRVIT 295
IG G FG V+ G + ++D VAIK I R+GA + F+ E + + + H LV++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVAS 355
C +V+++M +G L +L R + TLL + +DV
Sbjct: 70 VCLE-----QAPICLVFEFMEHGCLSDYL-------RTQRGLFAAETLL---GMCLDVCE 114
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
+ YL + ++H DL N L+ + + DFG++RF V + +SS G + +
Sbjct: 115 GMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPV 168
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ +PE S S+ DV+S+G+L+ E+ + K
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 100/223 (44%), Gaps = 37/223 (16%)
Query: 238 LIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSC 297
++G G++G VY G + +AIK I + S+ E K+++HKN+V+ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 87
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
F N F I + +P GSL L P +D E I T + L
Sbjct: 88 ----FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK--------QILEGL 135
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSA--HIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
YLH + I+H D+K N+L+ N S I DFG S+ + NP + GT+
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGI-NPCTET---FTGTL 187
Query: 416 GYVAPE--------YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y+APE YG + D++S G ++EM T K P
Sbjct: 188 QYMAPEIIDKGPRGYGKAA------DIWSLGCTIIEMATGKPP 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 76 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 129
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 183
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 184 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L D + +G G+FG VYK E + A KVI+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-LTLLQ 345
H N+V+++ + F + I+ ++ G++ DA+ +E+++ LT Q
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAV------DAVM-----LELERPLTESQ 136
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
+ AL+YLH + I+H DLK NIL D + DFG+S A + T+
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTI 189
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTN------GDVYSYGILLLEMVTTKKP 450
GT ++APE + E S + DV+S GI L+EM + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV + M NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 238 LIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSC 297
++G G++G VY G + +AIK I + S+ E K+++HKN+V+ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
F N F I + +P GSL L P +D E I T + L
Sbjct: 74 ----FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK--------QILEGL 121
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSA--HIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
YLH + I+H D+K N+L+ N S I DFG S+ + NP + GT+
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGI-NPCTET---FTGTL 173
Query: 416 GYVAPEY------GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y+APE G G D++S G ++EM T K P
Sbjct: 174 QYMAPEIIDKGPRGYGKAA----DIWSLGCTIIEMATGKPP 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ +C+ G ++ +Y G L +L A D+E + + L L + +
Sbjct: 106 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKE-DGRPLELRDLLHFSS 159
Query: 352 DVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
VA + +L ++C +H D+ N+LL N A IGDFGL+R SN V +
Sbjct: 160 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN-- 213
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+SYGILL E+ +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 76
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 126
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 127 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 183 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 41/229 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL-QRQGAS------KSFMAECKALKNIRHKNLV 291
IG G FG V+KG +D +VVAIK + L +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ ++ +V +++P G L L A P + ++ + +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP----------IKWSVKLRLML 129
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDN-----DLSAHIGDFGLSRFYQAVSNPTVS 406
D+A ++Y+ Q+ PI+H DL+ NI L + + A + DFGLS+ +V
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSVH 181
Query: 407 SSIGVRGTIGYVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKPTD 452
S G+ G ++APE +G+E + D YS+ ++L ++T + P D
Sbjct: 182 SVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 235 STNLIGVGSFGSVYKGVF-DEDGTVVAIKVINLQR---QGASKSFMAECKALKNIRHKNL 290
S +IG G FG VY G + D+ + + +L R ++F+ E ++ + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+ +I + ++ YM +G L +++ PQR+ T+ IS
Sbjct: 85 LALI----GIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQRNP-------TVKDLISFG 130
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+ VA ++YL ++ +H DL N +LD + + DFGL+R +V
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
R + + A E +T DV+S+G+LL E++T P
Sbjct: 188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRELQV 84
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 134
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 135 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 191 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 57
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 107
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 108 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 164 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 57
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 107
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 108 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 164 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 57
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 107
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 108 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 164 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 57
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 107
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 108 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 164 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRHKNLVRVIT 295
+G G FG+VY + ++A+KV+ L++ G E + ++RH N++R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 296 SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL--QRISIAI-D 352
F ++ +Y P G++ + E+QKL+ QR + I +
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYR--------------ELQKLSRFDEQRTATYITE 120
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+A+AL Y H + ++H D+KP N+LL ++ I DFG S V P+ S +
Sbjct: 121 LANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPS-SRRDTLC 171
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+ PE G D++S G+L E + P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ +C+ G ++ +Y G L +L A D+E + + L L + +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKE-DGRPLELRDLLHFSS 167
Query: 352 DVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
VA + +L ++C +H D+ N+LL N A IGDFGL+R SN V +
Sbjct: 168 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN-- 221
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+SYGILL E+ +
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV + M NGSL+ +L R+ + Q
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFL---------RKHDAQ 143
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 144 -FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE- 198
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 199 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRELQV 57
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 107
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 108 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 164 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFD---EDGTVVAIKVINL-QRQGASKSFMAECKAL 282
L AT+ S ++G G FG V G + VAIK + + + + F+ E +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 283 KNIRHKNLVR---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
H N++R V+T V IV + M NGSL+ +L R+ + Q
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFL---------RKHDAQ 114
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
T++Q + + +AS + YL +H DL NIL++++L + DFGLSR +
Sbjct: 115 -FTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLE- 169
Query: 400 VSNPTVS-SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P + ++ G + I + +PE + ++ DV+SYGI+L E+++
Sbjct: 170 -DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRELQV 119
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 169
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 170 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 225
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 226 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P+ + + +
Sbjct: 70 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPS 123
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N + D + IGDFG++R Y+
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE--- 177
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 178 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V+K G V+A K+I+L+ + A ++ + IR +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQV 60
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP++ +L
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----------ILG 110
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + + I+H D+KPSNIL+++ + DFG+S + ++N
Sbjct: 111 KVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF 166
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y++PE G+ S D++S G+ L+EM + P
Sbjct: 167 V-------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRH 287
+ F NL+G GSF VY+ G VAIK+I+ + + G + E K ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
+++ + F+ +++ +V + NG + ++L P + E
Sbjct: 71 PSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR---------- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + + YLH H ILH DL SN+LL +++ I DFGL+ + +
Sbjct: 116 HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT- 171
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
+ GT Y++PE S DV+S G + ++ + P D
Sbjct: 172 ---LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 36/252 (14%)
Query: 205 PSRQPSEPMIRKALL-KMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIK- 262
P QP +KAL M Y +L F IG G F VY+ DG VA+K
Sbjct: 14 PQFQP-----QKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVPVALKK 64
Query: 263 --VINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSL 320
+ +L A + E LK + H N+++ S F ++ IV + G L
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS-----FIEDNELNIVLELADAGDL 119
Query: 321 EKWLHPDAIPQRDREIEIQKLTLLQRI--SIAIDVASALDYLHQHCQEPILHCDLKPSNI 378
+ + + + QK + +R + + SAL+++H ++H D+KP+N+
Sbjct: 120 SRMI---------KHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANV 167
Query: 379 LLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYG 438
+ +GD GL RF+ + +++ + GT Y++PE + + D++S G
Sbjct: 168 FITATGVVKLGDLGLGRFFSS----KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223
Query: 439 ILLLEMVTTKKP 450
LL EM + P
Sbjct: 224 CLLYEMAALQSP 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G+ G+VY + G VAI+ +NLQ+Q + + E ++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +Y+ GSL + + + Q ++ + AL+
Sbjct: 87 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG------------QIAAVCRECLQALE 131
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
+LH + ++H D+K NILL D S + DFG + A P S + GT ++
Sbjct: 132 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWM 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+ +EM+ + P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P + +
Sbjct: 83 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPAMANNPVLAPPS 136
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 137 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 190
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 191 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G+ G+VY + G VAI+ +NLQ+Q + + E ++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +Y+ GSL + + + Q ++ + AL+
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG------------QIAAVCRECLQALE 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
+LH + ++H D+K NILL D S + DFG + A P S + GT ++
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWM 183
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+ +EM+ + P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G+ G+VY + G VAI+ +NLQ+Q + + E ++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +Y+ GSL + + + Q ++ + AL+
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG------------QIAAVCRECLQALE 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
+LH + ++H D+K NILL D S + DFG + A P S + GT ++
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSTMVGTPYWM 183
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+ +EM+ + P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G+ G+VY + G VAI+ +NLQ+Q + + E ++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +Y+ GSL + + + Q ++ + AL+
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG------------QIAAVCRECLQALE 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
+LH + ++H D+K NILL D S + DFG + A P S + GT ++
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSEMVGTPYWM 183
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+ +EM+ + P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L D + +G G+FG VYK E + A KVI+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-LTLLQ 345
H N+V+++ + F + I+ ++ G++ DA+ +E+++ LT Q
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAV------DAVM-----LELERPLTESQ 136
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
+ AL+YLH + I+H DLK NIL D + DFG+S A + +
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXI 189
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTN------GDVYSYGILLLEMVTTKKP 450
GT ++APE + E S + DV+S GI L+EM + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDG---TVVAIKVINL-QRQGASKSFMAECKALKNIRHKNLVR 292
+IG G FG V G G VAIK + + + + F+ E + H N+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 293 ---VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V+T V IV ++M NG+L+ +L + D + T++Q + +
Sbjct: 109 LEGVVTRGKPV--------MIVIEFMENGALDAFLR-----KHD-----GQFTVIQLVGM 150
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP-TVSSS 408
+A+ + YL +H DL NIL++++L + DFGLSR + +P V ++
Sbjct: 151 LRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE--DDPEAVYTT 205
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + + + APE + ++ DV+SYGI++ E+++
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRV 293
+G G FG V Y D G +VA+K + +S + E L+ + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
C QG +V +Y+P GSL D +P+ + L Q + A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLR-----DYLPR-------HSIGLAQLLLFAQQI 126
Query: 354 ASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ YLH QH +H +L N+LLDND IGDFGL++ + P VR
Sbjct: 127 CEGMAYLHSQH----YIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVR 177
Query: 413 ----GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE + DV+S+G+ L E++T
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 41/229 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL-QRQGAS------KSFMAECKALKNIRHKNLV 291
IG G FG V+KG +D +VVAIK + L +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ ++ +V +++P G L L A P + ++ + +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP----------IKWSVKLRLML 129
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDN-----DLSAHIGDFGLSRFYQAVSNPTVS 406
D+A ++Y+ Q+ PI+H DL+ NI L + + A + DFG S +V
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-------TSQQSVH 181
Query: 407 SSIGVRGTIGYVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKPTD 452
S G+ G ++APE +G+E + D YS+ ++L ++T + P D
Sbjct: 182 SVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRV 293
+G G FG V Y D G +VA+K + +S + E L+ + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
C QG +V +Y+P GSL D +P+ + L Q + A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLR-----DYLPR-------HSIGLAQLLLFAQQI 126
Query: 354 ASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ YLH QH +H +L N+LLDND IGDFGL++ + P VR
Sbjct: 127 CEGMAYLHAQH----YIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVR 177
Query: 413 ----GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE + DV+S+G+ L E++T
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L D + +G G+FG VYK E + A KVI+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-LTLLQ 345
H N+V+++ + F + I+ ++ G++ DA+ +E+++ LT Q
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAV------DAVM-----LELERPLTESQ 136
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
+ AL+YLH + I+H DLK NIL D + DFG+S A + +
Sbjct: 137 IQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXI 189
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTN------GDVYSYGILLLEMVTTKKP 450
GT ++APE + E S + DV+S GI L+EM + P
Sbjct: 190 QRRDXFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASK-SFMAECKAL 282
A + + + +G GSFG VY+GV DE T VAIK +N + F+ E +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
K ++VR++ S QG ++ + M G L+ +L P + +
Sbjct: 73 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR-SLRPAMANNPVLAPPS 126
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVS 401
L + I +A ++A + YL+ + +H DL N ++ D + IGDFG++R Y+
Sbjct: 127 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--- 180
Query: 402 NPTVSSSIGVRG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T G +G + +++PE +T DV+S+G++L E+ T
Sbjct: 181 --TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 215 RKALLKMSYKSLLKATDG-FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI----NLQRQ 269
R+ L K+ SL K + F +G GS+GSVYK + E G +VAIK + +LQ
Sbjct: 12 RRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI 71
Query: 270 GASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWLH 325
S M +C S V + G+ FK IV +Y GS+
Sbjct: 72 IKEISIMQQCD---------------SPHVVKYYGSYFKNTDLWIVMEYCGAGSVS---- 112
Query: 326 PDAIPQRDREI-EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDL 384
D I R++ + E + T+LQ L+YLH + +H D+K NILL+ +
Sbjct: 113 -DIIRLRNKTLTEDEIATILQ------STLKGLEYLHFMRK---IHRDIKAGNILLNTEG 162
Query: 385 SAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTN--GDVYSYGILLL 442
A + DFG++ ++ V GT ++APE + E+ N D++S GI +
Sbjct: 163 HAKLADFGVA----GQLTDXMAKRNXVIGTPFWMAPE--VIQEIGYNCVADIWSLGITAI 216
Query: 443 EMVTTKKP 450
EM K P
Sbjct: 217 EMAEGKPP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 259 VAIKVI--NLQRQGA-SKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYM 315
VA+KV+ +L R + F E + + H +V V + + + IV +Y+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEA-ETPAGPLPYIVMEYV 98
Query: 316 PNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKP 375
+L +H + +T + I + D AL++ HQ+ I+H D+KP
Sbjct: 99 DGVTLRDIVHTEG-----------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 376 SNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVY 435
+NI++ + + DFG++R A S +V+ + V GT Y++PE G V DVY
Sbjct: 145 ANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 436 SYGILLLEMVTTKKP 450
S G +L E++T + P
Sbjct: 204 SLGCVLYEVLTGEPP 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRV 293
+G G FG V Y D G +VA+K + +S + E L+ + H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
C G +V +Y+P GSL D +P+ + L Q + A +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLR-----DYLPR-------HSIGLAQLLLFAQQI 143
Query: 354 ASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ YLH QH +H DL N+LLDND IGDFGL++ + P VR
Sbjct: 144 CEGMAYLHAQH----YIHRDLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEXYRVR 194
Query: 413 ----GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE + DV+S+G+ L E++T
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 35/226 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D F + +G G+ G V K G ++A K+I+L+ + A ++ + IR +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI--------IRELQV 67
Query: 291 VRVITSCSSVDFQGNDFK----AIVYKYMPNGSLEKWL-HPDAIPQRDREIEIQKLTLLQ 345
+ S V F G + +I ++M GSL++ L IP+ +L
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE----------ILG 117
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPT 404
++SIA V L YL + Q I+H D+KPSNIL+++ + DFG+S + +++N
Sbjct: 118 KVSIA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 173
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V GT Y+APE G+ S D++S G+ L+E+ + P
Sbjct: 174 V-------GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 41/229 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL-QRQGAS------KSFMAECKALKNIRHKNLV 291
IG G FG V+KG +D +VVAIK + L +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ ++ +V +++P G L L A P + ++ + +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP----------IKWSVKLRLML 129
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDN-----DLSAHIGDFGLSRFYQAVSNPTVS 406
D+A ++Y+ Q+ PI+H DL+ NI L + + A + DF LS+ +V
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSVH 181
Query: 407 SSIGVRGTIGYVAPEYGLGSE---VSTNGDVYSYGILLLEMVTTKKPTD 452
S G+ G ++APE +G+E + D YS+ ++L ++T + P D
Sbjct: 182 SVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 259 VAIKVI--NLQRQGA-SKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYM 315
VA+KV+ +L R + F E + + H +V V + + + IV +Y+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 98
Query: 316 PNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKP 375
+L +H + +T + I + D AL++ HQ+ I+H D+KP
Sbjct: 99 DGVTLRDIVHTEG-----------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 376 SNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVY 435
+NI++ + + DFG++R N +V+ + V GT Y++PE G V DVY
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 436 SYGILLLEMVTTKKP 450
S G +L E++T + P
Sbjct: 204 SLGCVLYEVLTGEPP 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ IG GSFG V+KG+ + VVAIK+I+L+ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----------IT 57
Query: 293 VITSCSS---VDFQGNDFK----AIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K I+ +Y+ GS L P + E Q T+L+
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD------ETQIATILR 111
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
++ LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 112 ------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQI 159
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S + D++S GI +E+ + P
Sbjct: 160 KRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSF 275
M+ +LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K
Sbjct: 3 MALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 276 MAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDRE 335
+ E + ++ + ++ R++ C + Q ++ + MP G L D + +
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDN 110
Query: 336 IEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
I Q L ++ + +A ++YL ++H DL N+L+ I DFGL++
Sbjct: 111 IGSQYL-----LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 162
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
A + G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 163 LLGAEEKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 209 PSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR 268
PS +ALL+ +LK T+ F ++G G+FG+VYKG++ +G V I V ++
Sbjct: 33 PSGEAPNQALLR-----ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMEL 86
Query: 269 QGAS-----KSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW 323
+ A+ K + E + ++ + ++ R++ C + Q ++ + MP G L
Sbjct: 87 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-- 138
Query: 324 LHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND 383
D + + I Q L ++ + +A ++YL ++H DL N+L+
Sbjct: 139 ---DYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTP 187
Query: 384 LSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
I DFGL++ A + G + I ++A E L + DV+SYG+ + E
Sbjct: 188 QHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 245
Query: 444 MVT-TKKPTD 452
++T KP D
Sbjct: 246 LMTFGSKPYD 255
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 209 PSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQ 267
PS +ALL+ +LK T+ F ++G G+FG+VYKG++ +G V I V I
Sbjct: 3 PSGEAPNQALLR-----ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 56
Query: 268 RQG----ASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW 323
R+ A+K + E + ++ + ++ R++ C + Q ++ + MP G L
Sbjct: 57 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-- 108
Query: 324 LHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND 383
D + + I Q L ++ + +A ++YL ++H DL N+L+
Sbjct: 109 ---DYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTP 157
Query: 384 LSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
I DFGL++ A + G + I ++A E L + DV+SYG+ + E
Sbjct: 158 QHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 215
Query: 444 MVT-TKKPTD 452
++T KP D
Sbjct: 216 LMTFGSKPYD 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ IG GSFG V+KG+ + VVAIK+I+L+ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----------IT 57
Query: 293 VITSCSS---VDFQGNDFK----AIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K I+ +Y+ GS L P + E Q T+L+
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD------ETQIATILR 111
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
++ LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 112 ------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQI 159
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S + D++S GI +E+ + P
Sbjct: 160 KRNXFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 259 VAIKVI--NLQRQGA-SKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYM 315
VA+KV+ +L R + F E + + H +V V + + + IV +Y+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 115
Query: 316 PNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKP 375
+L +H + +T + I + D AL++ HQ+ I+H D+KP
Sbjct: 116 DGVTLRDIVHTEG-----------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 161
Query: 376 SNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVY 435
+NI++ + + DFG++R A S +V+ + V GT Y++PE G V DVY
Sbjct: 162 ANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 220
Query: 436 SYGILLLEMVTTKKP 450
S G +L E++T + P
Sbjct: 221 SLGCVLYEVLTGEPP 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHKNLVRVITS 296
IG GS+G K DG ++ K ++ + + ++E L+ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+D + N IV +Y G L I + +E + + R+ + +A
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDL-----ASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ +LH DLKP+N+ LD + +GDFGL+R + N S + GT
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----ILNHDTSFAKAFVGTPY 181
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y++PE + D++S G LL E+ P
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 44/245 (17%)
Query: 225 SLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKN 284
SL A+D F ++G G+FG V K D AIK I + S + ++E L +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLAS 58
Query: 285 IRHKNLVR----------VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR 334
+ H+ +VR + ++V + F I +Y NG+L +H + + Q+
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENGTLYDLIHSENLNQQRD 116
Query: 335 EIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
E L ++I AL Y+H + I+H DLKP NI +D + IGDFGL+
Sbjct: 117 EY----WRLFRQI------LEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 395 R-FYQAV------------SNPTVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGIL 440
+ ++++ S+ ++S+I GT YVA E G+ + D+YS GI+
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 441 LLEMV 445
EM+
Sbjct: 221 FFEMI 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G+ G+VY + G VAI+ +NLQ+Q + + E ++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +Y+ GSL + + + Q ++ + AL+
Sbjct: 87 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG------------QIAAVCRECLQALE 131
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
+LH + ++H ++K NILL D S + DFG + A P S + GT ++
Sbjct: 132 FLHSN---QVIHRNIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSTMVGTPYWM 184
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+ +EM+ + P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDG---TVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNL 290
+IG G G V G G VAIK + +RQ + F++E + H N+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNI 112
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT-LLQRISI 349
+R+ V +G IV +YM NGSL+ +L D + I +L +L+ +
Sbjct: 113 IRL----EGVVTRGR-LAMIVTEYMENGSLDTFLR-----THDGQFTIMQLVGMLRGVGA 162
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S L Y+H+ DL N+L+D++L + DFGLSR + +P + ++
Sbjct: 163 GMRYLSDLGYVHR---------DLAARNVLVDSNLVCKVSDFGLSRVLE--DDPDAAXTT 211
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE S+ DV+S+G+++ E++
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 31/228 (13%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSL--------EKWLHPDAIPQRDRE----IEIQ 339
++ +C+ G ++ +Y G L E L P P +D E + +
Sbjct: 99 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 340 KLTLLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
L L + + VA + +L ++C +H D+ N+LL N A IGDFGL+R
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
SN V + R + ++APE + DV+SYGILL E+ +
Sbjct: 210 NDSNYIVKGN--ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ IG GSFG V+KG+ + VVAIK+I+L+ + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----------IT 72
Query: 293 VITSCSS---VDFQGNDFK----AIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K I+ +Y+ GS L P + E Q T+L+
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD------ETQIATILR 126
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
++ LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 127 ------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQI 174
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S + D++S GI +E+ + P
Sbjct: 175 KRNXFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKS----FMAECKALKNIRHKNL 290
+G G FG V Y D G +VA+K + ++G + E + L+ + H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
V+ C QG +V +Y+P GSL D +P+ + L Q + A
Sbjct: 73 VKYKGCCED---QGEKSVQLVMEYVPLGSLR-----DYLPR-------HCVGLAQLLLFA 117
Query: 351 IDVASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ + YLH QH +H L N+LLDND IGDFGL++ + P
Sbjct: 118 QQICEGMAYLHAQH----YIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYY 168
Query: 410 GVR----GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
VR + + APE + DV+S+G+ L E++T
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 237 NLIGVGSFGSVYKGVFDEDG---TVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNL 290
+IG G G V G G VAIK + +RQ + F++E + H N+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNI 112
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT-LLQRISI 349
+R+ V +G IV +YM NGSL+ +L D + I +L +L+ +
Sbjct: 113 IRL----EGVVTRGR-LAMIVTEYMENGSLDTFLR-----THDGQFTIMQLVGMLRGVGA 162
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS-SS 408
+ S L Y+H+ DL N+L+D++L + DFGLSR + +P + ++
Sbjct: 163 GMRYLSDLGYVHR---------DLAARNVLVDSNLVCKVSDFGLSRVLE--DDPDAAYTT 211
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + I + APE S+ DV+S+G+++ E++
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKS----FMAECKALKNIRHKNL 290
+G G FG V Y D G +VA+K + ++G + E + L+ + H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
V+ C QG +V +Y+P GSL D +P+ + L Q + A
Sbjct: 74 VKYKGCCED---QGEKSVQLVMEYVPLGSLR-----DYLPR-------HCVGLAQLLLFA 118
Query: 351 IDVASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ + YLH QH +H L N+LLDND IGDFGL++ + P
Sbjct: 119 QQICEGMAYLHAQH----YIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYY 169
Query: 410 GVR----GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
VR + + APE + DV+S+G+ L E++T
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQR--QGASKSFMAECKALKNIRHKNLVRVITS 296
IG G++G+V+K E +VA+K + L +G S + E LK ++HKN+VR+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--- 66
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
D +D K + + L+K+ D+ D + EI K L Q +
Sbjct: 67 ---HDVLHSDKKLTLVFEFCDQDLKKYF--DSC-NGDLDPEIVKSFLFQ-------LLKG 113
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
L + H +LH DLKP N+L++ + + DFGL+R A P S V T+
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEV-VTLW 166
Query: 417 YVAPEYGLGSEV-STNGDVYSYGILLLEMVTTKKP 450
Y P+ G+++ ST+ D++S G + E+ +P
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ IG GSFG V+KG+ + VVAIK+I+L+ + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----------IT 77
Query: 293 VITSCSS---VDFQGNDFK----AIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K I+ +Y+ GS L P + E Q T+L+
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD------ETQIATILR 131
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
I LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 132 EI------LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQI 179
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S + D++S GI +E+ + P
Sbjct: 180 KRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGV 411
+A + YL+ + +H DL N ++ +D + IGDFG++R Y+ T G
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-----TAYYRKGG 190
Query: 412 RG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+G + ++APE +T+ D++S+G++L E+ +
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 121
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 122 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 174 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 119
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 120 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 172 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGXLL-----DYVREHKDNIGSQY 119
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 120 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 172 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHKNLVRVITS 296
IG GS+G K DG ++ K ++ + + ++E L+ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+D + N IV +Y G L I + +E + + R+ + +A
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDL-----ASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ +LH DLKP+N+ LD + +GDFGL+R + N S + GT
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----ILNHDTSFAKTFVGTPY 181
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y++PE + D++S G LL E+ P
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQR--IS 348
++ +C+ G ++ +Y G L +L + + + D I TL R +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ VA + +L + +H D+ N+LL N A IGDFGL+R SN V +
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+SYGILL E+ +
Sbjct: 226 --ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 4 NDLSGTIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNLKALRSFDVSNNGLSGEIPIEL 63
N +SG IP++ S S L S+ ++ N G IPP NL L D+S N L G+ +
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLF 217
Query: 64 GLCSSLEDIYLGGN---FFHGSIPSFFRTSRGIRKLDLSRNNLSGQIPLFLEALS-LEYL 119
G + + I+L N F G + S+ + LDL N + G +P L L L L
Sbjct: 218 GSDKNTQKIHLAKNSLAFDLGKV----GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273
Query: 120 NLSFNDFEGKVPTKGIFANTSAISVAGCHRLCGGIPELQLPKCT 163
N+SFN+ G++P G + A LCG LP CT
Sbjct: 274 NVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPACT 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 5 DLSG-------TIPEAIFSISYLSNSLNLAENHFVGSIPPRIGNL--------------- 42
DLSG IP ++ ++ YL+ N+ VG IPP I L
Sbjct: 56 DLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 43 ---------KALRSFDVSNNGLSGEIPIELGLCSSLEDIYLGGNFFHGSIP-SFFRTSRG 92
K L + D S N LSG +P + +L I GN G+IP S+ S+
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 93 IRKLDLSRNNLSGQIPLFLEALSLEYLNLSFNDFEG 128
+ +SRN L+G+IP L+L +++LS N EG
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEG 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 121
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 122 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 174 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 120
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 121 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 173 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 128
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 129 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 180
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 181 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 121
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 122 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 174 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 125
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 126 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 178 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 121
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 122 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 174 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 124
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 125 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 176
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 177 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 112
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 113 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 165 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 120
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 121 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 173 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTV---VAIKVINL---QRQGASKSFMAECKALKNIRHKNLVR 292
+G G +VY ED + VAIK I + +++ K F E + H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
+I VD + +D +V +Y+ +L +++ L++ I+
Sbjct: 76 MI----DVD-EEDDCYYLVMEYIEGPTLSEYIESHG-----------PLSVDTAINFTNQ 119
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ + + H I+H D+KP NIL+D++ + I DFG+++ A+S +++ + V
Sbjct: 120 ILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAK---ALSETSLTQTNHVL 173
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y +PE G D+YS GI+L EM+ + P
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGXLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 143
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 144 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 196 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+A + YL+ + +H DL N ++ +D + IGDFG++R T G +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 191
Query: 413 G--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + ++APE +T+ D++S+G++L E+ +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 82 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+A + YL+ + +H DL N ++ +D + IGDFG++R T G +
Sbjct: 136 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 188
Query: 413 G--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + ++APE +T+ D++S+G++L E+ +
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+A + YL+ + +H DL N ++ +D + IGDFG++R T G +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 191
Query: 413 G--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
G + ++APE +T+ D++S+G++L E+ +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 16/234 (6%)
Query: 219 LKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGASKS--- 274
LK + +L F+ ++G G FGSV + EDG+ V + V L+ + S
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 275 -FMAECKALKNIRHKNLVRVITSCSSVDFQGN-DFKAIVYKYMPNGSLEKWLHPDAIPQR 332
F+ E +K H ++ +++ +G ++ +M +G L +L I +
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 333 DREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFG 392
+ +Q L + +D+A ++YL +H DL N +L D++ + DFG
Sbjct: 131 PFNLPLQTL-----VRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 393 LSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
LSR + S + + ++A E + + + DV+++G+ + E++T
Sbjct: 183 LSR--KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 84 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGV 411
+A + YL+ + +H DL N ++ +D + IGDFG++R Y+ T G
Sbjct: 138 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-----TDYYRKGG 189
Query: 412 RG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+G + ++APE +T+ D++S+G++L E+ +
Sbjct: 190 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKALKNIRHKN 289
D + +IG G+ V VAIK INL++ Q + + E +A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+V TS F D +V K + GS+ D I + E K +L +I
Sbjct: 75 IVSYYTS-----FVVKDELWLVMKLLSGGSV-----LDIIKHIVAKGE-HKSGVLDESTI 123
Query: 350 AI---DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
A +V L+YLH++ Q +H D+K NILL D S I DFG+S F + T +
Sbjct: 124 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 407 SSIGVR----GTIGYVAPEYGLGSEVST---NGDVYSYGILLLEMVTTKKP 450
VR GT ++APE + +V D++S+GI +E+ T P
Sbjct: 181 K---VRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGV 411
+A + YL+ + +H DL N ++ +D + IGDFG++R Y+ T G
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-----TDYYRKGG 190
Query: 412 RG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+G + ++APE +T+ D++S+G++L E+ +
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKALKNIRHKN 289
D + +IG G+ V VAIK INL++ Q + + E +A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+V TS F D +V K + GS+ D I + E K +L +I
Sbjct: 70 IVSYYTS-----FVVKDELWLVMKLLSGGSV-----LDIIKHIVAKGE-HKSGVLDESTI 118
Query: 350 AI---DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
A +V L+YLH++ Q +H D+K NILL D S I DFG+S F + T +
Sbjct: 119 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 407 SSIGVR----GTIGYVAPEYGLGSEVST---NGDVYSYGILLLEMVTTKKP 450
VR GT ++APE + +V D++S+GI +E+ T P
Sbjct: 176 K---VRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ + IG GSFG VYKG+ + VVAIK+I+L+ + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-----------IT 69
Query: 293 VITSCSS---VDFQGNDFKA----IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K+ I+ +Y+ GS L P + E T+L+
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLE------ETYIATILR 123
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
++ LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 124 ------EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQI 171
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S D++S GI +E+ + P
Sbjct: 172 KRNXFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ +C+ G ++ +Y G L +L ++ R +E +IA
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLR-----RKSRVLETDPA-----FAIAN 158
Query: 352 DVASALDYLHQHCQ----------EPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
AS D LH Q + +H D+ N+LL N A IGDFGL+R S
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
N V + R + ++APE + DV+SYGILL E+ +
Sbjct: 219 NYIVKGN--ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA---ECKALKNIRHKNLVR--- 292
+G GSFG V + VA+K I+ Q S M E LK +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
VIT+ + + +V +Y G L D I ++ R E + Q+I AI+
Sbjct: 77 VITTPTDI--------VMVIEY-AGGELF-----DYIVEKKRMTEDEGRRFFQQIICAIE 122
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
Y H+H I+H DLKP N+LLD++L+ I DFGLS + S
Sbjct: 123 ------YCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----- 168
Query: 413 GTIGYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
G+ Y APE G + DV+S GI+L M+ + P D
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+FG V+K + G VA+K + ++ ++G + + E K L+ ++H+N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 297 CSSVDFQGNDFKAIVY------KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
C + N KA +Y ++ G L L K TL + +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL--------------VKFTLSEIKRVM 131
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+ + L Y+H++ ILH D+K +N+L+ D + DFGL+R + N +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 411 VRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVT 446
T+ Y PE LG + D++ G ++ EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 222 SYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS-KSFMAECK 280
Y LLK + IG G F V G +VAIK+++ G+ E +
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 281 ALKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
ALKN+RH++ L V+ + + + +V +Y P G L D I +DR E
Sbjct: 61 ALKNLRHQHICQLYHVLETANKI--------FMVLEYCPGGELF-----DYIISQDRLSE 107
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
+ + ++I SA+ Y+H + H DLKP N+L D + DFGL
Sbjct: 108 EETRVVFRQI------VSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTKKPTD 452
+ + + + G++ Y APE G S + + DV+S GILL ++ P D
Sbjct: 159 KGNKDYHLQTCC---GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIR 286
+D + ++G GSFG V G A+KVI ++++ +S + E + LK +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ + +V + G L D I R R E+ ++++
Sbjct: 91 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL-----FDEIISRKRFSEVDAARIIRQ 140
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
V S + Y+H++ I+H DLKP N+LL++ D + I DFGLS ++A +
Sbjct: 141 ------VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SK 189
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ I GT Y+APE G+ DV+S G++L
Sbjct: 190 KMKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 238 LIG-VGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITS 296
+IG +G FG VYK E + A KVI+ + + + +M E L + H N+V+++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-LTLLQRISIAIDVAS 355
F + I+ ++ G++ DA+ +E+++ LT Q +
Sbjct: 76 -----FYYENNLWILIEFCAGGAV------DAV-----MLELERPLTESQIQVVCKQTLD 119
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTI 415
AL+YLH + I+H DLK NIL D + DFG+S + + GT
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTP 173
Query: 416 GYVAPEYGLGSEVSTN------GDVYSYGILLLEMVTTKKP 450
++APE + E S + DV+S GI L+EM + P
Sbjct: 174 YWMAPEVVM-CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ S L++LHQ I++ DLKP N+LLD+D + I D GL+ +A T G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK----GYA 350
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT G++APE LG E + D ++ G+ L EM+ + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ S L++LHQ I++ DLKP N+LLD+D + I D GL+ +A T G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK----GYA 350
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT G++APE LG E + D ++ G+ L EM+ + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ S L++LHQ I++ DLKP N+LLD+D + I D GL+ +A T G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK----GYA 350
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT G++APE LG E + D ++ G+ L EM+ + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ S L++LHQ I++ DLKP N+LLD+D + I D GL+ +A T G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK----GYA 350
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT G++APE LG E + D ++ G+ L EM+ + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F+ IG GSFG V+KG+ + VVAIK+I+L+ + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE-----------IT 73
Query: 293 VITSCSS---VDFQGNDFKA----IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
V++ C S + G+ K I+ +Y+ GS L E Q T+L+
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD------EFQIATMLK 127
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
I LDYLH E +H D+K +N+LL + DFG++ +++ +
Sbjct: 128 EI------LKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQI 175
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ V GT ++APE S + D++S GI +E+ + P
Sbjct: 176 KRNTFV-GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQKLTLLQRIS 348
++ +C+ G IV ++ G+L +L + +P + ++ LTL I
Sbjct: 97 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ VA +++L +H DL NILL I DFGL+R +P
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRK 207
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQR--QGASKSFMAECKALKNIRHKNLVRVITS 296
IG G++G+V+K E +VA+K + L +G S + E LK ++HKN+VR+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--- 66
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
D +D K + + L+K+ D+ D + EI K L Q +
Sbjct: 67 ---HDVLHSDKKLTLVFEFCDQDLKKYF--DSC-NGDLDPEIVKSFLFQ-------LLKG 113
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
L + H +LH DLKP N+L++ + + +FGL+R A P S V T+
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEV-VTLW 166
Query: 417 YVAPEYGLGSEV-STNGDVYSYGILLLEMVTTKKP 450
Y P+ G+++ ST+ D++S G + E+ +P
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIR 286
+D + ++G GSFG V G A+KVI+ ++++ +S + E + LK +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ + +V + G L D I R R E+ ++++
Sbjct: 85 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL-----FDEIISRKRFSEVDAARIIRQ 134
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
V S + Y+H++ I+H DLKP N+LL++ D + I DFGLS ++A +
Sbjct: 135 ------VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SK 183
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ I GT Y+APE G+ DV+S G++L
Sbjct: 184 KMKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 239 IGVGSFGSVYKGVFD--EDGTVVAIKVINLQRQGASKS----FMAECKALKNIRHKNLVR 292
+G G+FGSV +GV+ + VAIKV+ +QG K+ M E + + + + +VR
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL---KQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT-LLQRISIAI 351
+I C + +V + G L K+L + +R+ EI + + LL ++S+ +
Sbjct: 75 LIGVCQAEALM------LVMEMAGGGPLHKFL----VGKRE-EIPVSNVAELLHQVSMGM 123
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+++H+ DL N+LL N A I DFGLS+ A + + S G
Sbjct: 124 KYLEEKNFVHR---------DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG- 173
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTT-KKP 450
+ + + APE + S+ DV+SYG+ + E ++ +KP
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIR 286
+D + ++G GSFG V G A+KVI+ ++++ +S + E + LK +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ + +V + G L D I R R E+ ++++
Sbjct: 108 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL-----FDEIISRKRFSEVDAARIIRQ 157
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
V S + Y+H++ I+H DLKP N+LL++ D + I DFGLS ++A +
Sbjct: 158 ------VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SK 206
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ I GT Y+APE G+ DV+S G++L
Sbjct: 207 KMKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+FG V+K + G VA+K + ++ ++G + + E K L+ ++H+N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 297 CSSVDFQGNDFKAIVY------KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
C + N K +Y ++ G L L K TL + +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------------VKFTLSEIKRVM 131
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+ + L Y+H++ ILH D+K +N+L+ D + DFGL+R + N +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 411 VRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVT 446
T+ Y PE LG + D++ G ++ EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 120
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 121 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 173 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQ-RQGASKSFMAECKALKNIRHKNLVR---VI 294
+G G++ +VYKG +VA+K I L+ +GA + + E LK+++H N+V +I
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP--DAIPQRDREIEIQKLTLLQRISIAID 352
+ S+ +V++Y+ + L+++L + I + KL L Q
Sbjct: 70 HTEKSL--------TLVFEYL-DKDLKQYLDDCGNIINMHN-----VKLFLFQ------- 108
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
+ L Y H+ + +LH DLKP N+L++ + DFGL+R A S PT + V
Sbjct: 109 LLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEV- 161
Query: 413 GTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVT 446
T+ Y P+ LGS + ST D++ G + EM T
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 122
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 123 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 174
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 175 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 120
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 121 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 173 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIR 286
+D + ++G GSFG V G A+KVI+ ++++ +S + E + LK +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ + +V + G L D I R R E+ ++++
Sbjct: 109 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL-----FDEIISRKRFSEVDAARIIRQ 158
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
V S + Y+H++ I+H DLKP N+LL++ D + I DFGLS ++A +
Sbjct: 159 ------VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SK 207
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ I GT Y+APE G+ DV+S G++L
Sbjct: 208 KMKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 43/243 (17%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L+ F ++G G+FG V K D AIK I + S + ++E L ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLN 60
Query: 287 HKNLVR----------VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREI 336
H+ +VR + ++V + F I +Y N +L +H + + Q+ E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 337 EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR- 395
L ++I AL Y+H + I+H DLKP NI +D + IGDFGL++
Sbjct: 119 ----WRLFRQI------LEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 396 FYQAV------------SNPTVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLL 442
++++ S+ ++S+I GT YVA E G+ + D+YS GI+
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 443 EMV 445
EM+
Sbjct: 223 EMI 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++ G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLL-----DYVREHKDNIGSQY 125
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 126 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 178 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+FG V+K + G VA+K + ++ ++G + + E K L+ ++H+N+V +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 297 CSSVDFQGNDFKAIVY------KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
C + N K +Y ++ G L L K TL + +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------------VKFTLSEIKRVM 130
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+ + L Y+H++ ILH D+K +N+L+ D + DFGL+R + N +
Sbjct: 131 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 411 VRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVT 446
T+ Y PE LG + D++ G ++ EM T
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 125
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 126 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 178 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHKNLVRVITS 296
IG GS+G K DG ++ K ++ + + ++E L+ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+D + N IV +Y G L I + +E + + R+ + +A
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDL-----ASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ +LH DLKP+N+ LD + +GDFGL+R + N + GT
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----ILNHDEDFAKEFVGTPY 181
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y++PE + D++S G LL E+ P
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 216 KALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG---- 270
+ALL+ +LK T+ ++G G+FG+VYKG++ DG V I V I + R+
Sbjct: 8 QALLR-----ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK 61
Query: 271 ASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIP 330
A+K + E + + + R++ C + Q +V + MP G L D +
Sbjct: 62 ANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ------LVTQLMPYGCLL-----DHVR 110
Query: 331 QRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGD 390
+ + Q L ++ + +A + YL ++H DL N+L+ + I D
Sbjct: 111 ENRGRLGSQDL-----LNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITD 162
Query: 391 FGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKK 449
FGL+R + T + G + I ++A E L + DV+SYG+ + E++T K
Sbjct: 163 FGLARLLDI--DETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAK 220
Query: 450 PTD 452
P D
Sbjct: 221 PYD 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G+FG VYK E G + A KVI + + + ++ E + L H +V+++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK-LTLLQRISIAIDVASAL 357
+ + I+ ++ P G++ DAI +E+ + LT Q + + AL
Sbjct: 85 ---YYHDGKLWIMIEFCPGGAV------DAI-----MLELDRGLTEPQIQVVCRQMLEAL 130
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++LH + I+H DLK N+L+ + + DFG+S A + T+ GT +
Sbjct: 131 NFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYW 183
Query: 418 VAPEYGLGSEVST-----NGDVYSYGILLLEMVTTKKP 450
+APE + + D++S GI L+EM + P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++ G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 125
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 126 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 178 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 120
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 121 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 173 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRH 287
D F +G G FG+VY + +VA+KV+ ++++G E + ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N++R+ F ++ +Y P G L K L Q+ + Q+
Sbjct: 83 PNILRLYNY-----FYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRTA----- 126
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+I ++A AL Y H + ++H D+KP N+LL I DFG S ++ T+
Sbjct: 127 TIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC- 182
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+ PE G + D++ G+L E++ P
Sbjct: 183 -----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+FG V+K + G VA+K + ++ ++G + + E K L+ ++H+N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 297 CSSVDFQGNDFKAIVY------KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
C + N K +Y ++ G L L K TL + +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------------VKFTLSEIKRVM 131
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
+ + L Y+H++ ILH D+K +N+L+ D + DFGL+R + N +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 411 VRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVT 446
T+ Y PE LG + D++ G ++ EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 86 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGV 411
+A + YL+ + +H +L N ++ +D + IGDFG++R Y+ T G
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-----TDYYRKGG 191
Query: 412 RG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+G + ++APE +T+ D++S+G++L E+ +
Sbjct: 192 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 34/224 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL--QRQGASKSFMAECKALKNIRHK 288
D + +G G++G VYK + VAIK I L + +G + + E LK ++H+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
N++ + SV N ++++Y N L+K++ D P D + + K L Q I
Sbjct: 94 NIIEL----KSV-IHHNHRLHLIFEYAEN-DLKKYM--DKNP--DVSMRVIKSFLYQLI- 142
Query: 349 IAIDVASALDYLH-QHCQEPILHCDLKPSNILLD-NDLSA----HIGDFGLSRFYQAVSN 402
+ +++ H + C LH DLKP N+LL +D S IGDFGL+R +
Sbjct: 143 ------NGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMV 445
I T+ Y PE LGS ST+ D++S + EM+
Sbjct: 193 QFTHEII----TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++G G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFG ++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G+FG VYK E G + A KVI + + + ++ E + L H +V+++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIP-QRDREIEIQKLTLLQRISIAIDVASAL 357
+ + I+ ++ P G++ DAI + DR + ++ ++ R + AL
Sbjct: 77 ---YYHDGKLWIMIEFCPGGAV------DAIMLELDRGLTEPQIQVVCR-----QMLEAL 122
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
++LH + I+H DLK N+L+ + + DFG+S A + T+ GT +
Sbjct: 123 NFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYW 175
Query: 418 VAPEYGLGSEVST-----NGDVYSYGILLLEMVTTKKP 450
+APE + + D++S GI L+EM + P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKAL-KNIRHK 288
F +IG GSFG V + A+KV+ + ++ K M+E L KN++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
LV + S FQ D V Y+ G L L QR+R L R
Sbjct: 100 FLVGLHFS-----FQTADKLYFVLDYINGGELFYHL------QRER------CFLEPRAR 142
Query: 349 I-AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A ++ASAL YLH I++ DLKP NILLD+ + DFGL + + + + + +S
Sbjct: 143 FYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTS 197
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ GT Y+APE D + G +L EM+
Sbjct: 198 TFC--GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASK-SFMAECKALKNIRHKNLVR 292
+G GSFG VY+G + E T VA+K +N + F+ E +K ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ S +V + M +G L+ +L P+ + TL + I +A +
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLR-SLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGV 411
+A + YL+ + +H +L N ++ +D + IGDFG++R Y+ T G
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-----TDYYRKGG 190
Query: 412 RG--TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+G + ++APE +T+ D++S+G++L E+ +
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 226 LLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKV-INLQRQG----ASKSFMAECK 280
+LK T+ F ++ G+FG+VYKG++ +G V I V I R+ A+K + E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+ ++ + ++ R++ C + Q ++ + MP G L D + + I Q
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL-----DYVREHKDNIGSQY 118
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L ++ + +A ++YL ++H DL N+L+ I DFGL++ A
Sbjct: 119 L-----LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT-TKKPTD 452
+ G + I ++A E L + DV+SYG+ + E++T KP D
Sbjct: 171 EKEYHAE--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P ++ ++ K LTL
Sbjct: 97 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 207
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQKLTLLQRIS 348
++ +C+ G IV ++ G+L +L + +P +D + LTL I
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDF--LTLEHLIX 148
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ VA +++L +H DL NILL I DFGL+R +P
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR--DIYKDPDYVRK 203
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 37/227 (16%)
Query: 242 GSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVD 301
G FG V+K D VA+K+ LQ + + +S E + ++H+NL++ I + +
Sbjct: 26 GRFGCVWKAQLMND--FVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA----E 78
Query: 302 FQGNDFKA---IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+G++ + ++ + GSL +L + I T + +A ++ L
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNII------------TWNELCHVAETMSRGLS 126
Query: 359 YLHQHC--------QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
YLH+ + I H D K N+LL +DL+A + DFGL+ ++ P + G
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP--GDTHG 184
Query: 411 VRGTIGYVAPEYGLGS-----EVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G+ + D+Y+ G++L E+V+ K D
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 239 IGVGSFGSVYKGVFD--EDGTVVAIKVINLQRQGASKS----FMAECKALKNIRHKNLVR 292
+G G+FGSV +GV+ + VAIKV+ +QG K+ M E + + + + +VR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVL---KQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT-LLQRISIAI 351
+I C + +V + G L K+L + +R+ EI + + LL ++S+ +
Sbjct: 401 LIGVCQAEALM------LVMEMAGGGPLHKFL----VGKRE-EIPVSNVAELLHQVSMGM 449
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+++H+ +L N+LL N A I DFGLS+ A + + S G
Sbjct: 450 KYLEEKNFVHR---------NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG- 499
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + + APE + S+ DV+SYG+ + E ++
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 28/223 (12%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ ED + VA+K++ K + M+E K + ++ +H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAI-----PQRDREIEIQKLTL 343
++ +C+ G ++ +Y G L +L P + P + E ++ L
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
L + VA + +L + +H D+ N+LL N A IGDFGL+R SN
Sbjct: 169 LH---FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
V + R + ++APE + DV+SYGILL E+ +
Sbjct: 223 IVKGN--ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASKS----FMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IIHLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 238 LIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVR--- 292
++G GSFG V K A+KVIN + + + + E + LK + H N+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ SS IV + G L D I +R R E ++++
Sbjct: 89 ILEDSSSF--------YIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQ------ 129
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNPTVSSSI 409
V S + Y+H+H I+H DLKP NILL++ D I DFGLS +Q N + I
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRI 184
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE G+ DV+S G++L +++ P
Sbjct: 185 ---GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNID-- 211
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ R + ++APE + DV+S+G+L+ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 234 SSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRV 293
S T ++G G FG V+K G +A K+I + + E + + H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREI-EIQKLTLLQRISIAID 352
+ F+ + +V +Y+ G L DR I E LT L I
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGEL-----------FDRIIDESYNLTELDTILFMKQ 195
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNPTVSSSIG 410
+ + ++HQ ILH DLKP NIL N + I DFGL+R Y+ V+
Sbjct: 196 ICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--- 249
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT ++APE VS D++S G++ +++ P
Sbjct: 250 --GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQKLTLLQRIS 348
++ +C+ G IV ++ G+L +L + +P +D + LTL I
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDF--LTLEHLIC 148
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ VA +++L +H DL NILL I DFGL+R +P
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRK 203
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 233 FSSTNLIGVGSFGSVY---KGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIR 286
F ++G GSFG V+ K + G + A+KV+ L+ + ++ M E L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVN 88
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAI-PQRDREIEIQKLTLLQ 345
H +V++ + FQ ++ ++ G L L + + + D + + +L L
Sbjct: 89 HPFVVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL-- 141
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
LD+LH I++ DLKP NILLD + + DFGLS+ +A+ +
Sbjct: 142 ----------GLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKK 186
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ S GT+ Y+APE S + D +SYG+L+ EM+T P
Sbjct: 187 AYSFC--GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGASKSFMA---ECKALKNIRHKNLV 291
++G G FG+V+KGV+ +G + I V ++ + +SF A A+ ++ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
R++ C Q +V +Y+P GSL D + Q + Q L ++ +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLL-----DHVRQHRGALGPQLL-----LNWGV 122
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+A + YL +H ++H +L N+LL + + DFG++ + S
Sbjct: 123 QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE--A 177
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I ++A E + + DV+SYG+ + E++T
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IITLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNID-- 211
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ R + ++APE + DV+S+G+L+ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRVITSC 297
+G G FG V + + + G VAIK + ++ + E + +K + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 298 SSVD-FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ ND + +Y G L K+L+ +E I+ TLL D++SA
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLS------DISSA 134
Query: 357 LDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
L YLH++ I+H DLKP NI+L L I D G + + + + + G
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTEFV--G 186
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T+ Y+APE + + D +S+G L E +T +P
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVRVITSC 297
+G G FG V + + + G VAIK + ++ + E + +K + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 298 SSVD-FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ ND + +Y G L K+L+ +E I+ TLL D++SA
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLS------DISSA 133
Query: 357 LDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
L YLH++ I+H DLKP NI+L L I D G + + + + + G
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTEFV--G 185
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T+ Y+APE + + D +S+G L E +T +P
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G VA+K ++L++Q + E +++ H N+V + +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-- 110
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L D + ++ Q ++ + V AL
Sbjct: 111 ---YLVGDELWVVMEFLEGGALT-----DIVTH-------TRMNEEQIATVCLSVLRALS 155
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YLH + ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 156 YLH---NQGVIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSK-EVPKRKXLVGTPYWM 208
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE T D++S GI+++EM+ + P
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 238 LIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVR--- 292
++G GSFG V K A+KVIN + + + + E + LK + H N+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ SS IV + G L D I +R R E ++++
Sbjct: 89 ILEDSSSF--------YIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQ------ 129
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNPTVSSSI 409
V S + Y+H+H I+H DLKP NILL++ D I DFGLS +Q N + I
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRI 184
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE G+ DV+S G++L +++ P
Sbjct: 185 ---GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGASKSFMA---ECKALKNIRHKNLV 291
++G G FG+V+KGV+ +G + I V ++ + +SF A A+ ++ H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
R++ C Q +V +Y+P GSL D + Q + Q L ++ +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLL-----DHVRQHRGALGPQLL-----LNWGV 140
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+A + YL +H ++H +L N+LL + + DFG++ + S
Sbjct: 141 QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE--A 195
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I ++A E + + DV+SYG+ + E++T
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 238 LIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKSFMAECKALKNIRHKNLVR--- 292
++G GSFG V K A+KVIN + + + + E + LK + H N+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
++ SS IV + G L D I +R R E ++++
Sbjct: 89 ILEDSSSF--------YIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQ------ 129
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNPTVSSSI 409
V S + Y+H+H I+H DLKP NILL++ D I DFGLS +Q N + I
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRI 184
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE G+ DV+S G++L +++ P
Sbjct: 185 ---GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KNTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 62/263 (23%)
Query: 222 SYKSLLKATDGFSSTNLI-----GVGSFGSVYKGV-FDEDG----TVVAIKVINLQRQGA 271
++K L F NL+ G G FG V K F G T VA+K++ ++ A
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML---KENA 65
Query: 272 SKS----FMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL--- 324
S S ++E LK + H +++++ +CS Q IV +Y GSL +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRGFLRES 120
Query: 325 --------------------HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
HPD + LT+ IS A ++ + YL
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDE----------RALTMGDLISFAWQISQGMQYL---A 167
Query: 365 QEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGVRGTIGYVAPEYG 423
+ ++H DL NIL+ I DFGLSR Y+ + V S G R + ++A E
Sbjct: 168 EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSXVKRSQG-RIPVKWMAIESL 224
Query: 424 LGSEVSTNGDVYSYGILLLEMVT 446
+T DV+S+G+LL E+VT
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 38/237 (16%)
Query: 231 DGFSSTNLIGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKAL 282
D + +G G FG V D+D A+ V + + + A++ ++E + +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 283 KNI-RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI--- 338
K I +HKN++ ++ +C+ Q IV +Y G+L ++L P + +I
Sbjct: 82 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 339 --QKLTLLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
+++T +S +A ++YL Q C +H DL N+L+ + I DFGL+R
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 396 ------FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+Y+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 193 DINNIDYYKKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 92 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 147 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 202
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 203 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 38/237 (16%)
Query: 231 DGFSSTNLIGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASKS----FMAECKAL 282
D + +G G FG V D+D A+ V + + + A++ ++E + +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 283 KNI-RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI--- 338
K I +HKN++ ++ +C+ Q IV +Y G+L ++L P + +I
Sbjct: 141 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 339 --QKLTLLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
+++T +S +A ++YL Q C +H DL N+L+ + I DFGL+R
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 396 ------FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+Y+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 252 DINNIDYYKKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G +VA+K + + F E + LK + +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 73
Query: 295 TSCSSVDF-QGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR-EIEIQKLTLLQRISIAID 352
V + G +V +Y+P+G L +L QR R ++ +L L +
Sbjct: 74 ---RGVSYGPGRPELRLVMEYLPSGCLRDFL------QRHRARLDASRLLL-----YSSQ 119
Query: 353 VASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+ ++YL + C +H DL NIL++++ I DFGL++ + V G
Sbjct: 120 ICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG- 174
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I + APE + S DV+S+G++L E+ T
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 62/263 (23%)
Query: 222 SYKSLLKATDGFSSTNLI-----GVGSFGSVYKGV-FDEDG----TVVAIKVINLQRQGA 271
++K L F NL+ G G FG V K F G T VA+K++ ++ A
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML---KENA 65
Query: 272 SKS----FMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL--- 324
S S ++E LK + H +++++ +CS Q IV +Y GSL +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRGFLRES 120
Query: 325 --------------------HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
HPD + LT+ IS A ++ + YL +
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDE----------RALTMGDLISFAWQISQGMQYLAEMS 170
Query: 365 QEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGVRGTIGYVAPEYG 423
++H DL NIL+ I DFGLSR Y+ + V S G R + ++A E
Sbjct: 171 ---LVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSXVKRSQG-RIPVKWMAIESL 224
Query: 424 LGSEVSTNGDVYSYGILLLEMVT 446
+T DV+S+G+LL E+VT
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 62/263 (23%)
Query: 222 SYKSLLKATDGFSSTNLI-----GVGSFGSVYKGV-FDEDG----TVVAIKVINLQRQGA 271
++K L F NL+ G G FG V K F G T VA+K++ ++ A
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML---KENA 65
Query: 272 SKS----FMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL--- 324
S S ++E LK + H +++++ +CS Q IV +Y GSL +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRGFLRES 120
Query: 325 --------------------HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
HPD + LT+ IS A ++ + YL
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDE----------RALTMGDLISFAWQISQGMQYL---A 167
Query: 365 QEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIGVRGTIGYVAPEYG 423
+ ++H DL NIL+ I DFGLSR Y+ + V S G R + ++A E
Sbjct: 168 EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSYVKRSQG-RIPVKWMAIESL 224
Query: 424 LGSEVSTNGDVYSYGILLLEMVT 446
+T DV+S+G+LL E+VT
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 245 GSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQG 304
G ++KG + + VV + + S+ F EC L+ H N++ V+ +C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PP 80
Query: 305 NDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
++ +MP GSL LH D+ Q + A+D+A + +L H
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQS---------QAVKFALDMARGMAFL--HT 129
Query: 365 QEPIL-HCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYG 423
EP++ L ++++D D++A I + +Q S G +VAPE
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------SPGRMYAPAWVAPEAL 180
Query: 424 LGSEVSTN---GDVYSYGILLLEMVTTKKP 450
TN D++S+ +LL E+VT + P
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + +I +++T
Sbjct: 95 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 150 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 205
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 206 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 100/246 (40%), Gaps = 34/246 (13%)
Query: 211 EPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG 270
EP + K + K LK D F ++G GSFG V+ F + AIK L++
Sbjct: 1 EPELNKERPSLQIK--LKIED-FELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDV 55
Query: 271 ASKSFMAECKALKN------IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL 324
EC ++ H L + + FQ + V +Y+ G L +
Sbjct: 56 VLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDLMYHI 110
Query: 325 HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDL 384
K L + A ++ L +LH + I++ DLK NILLD D
Sbjct: 111 Q-----------SCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDG 156
Query: 385 SAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEM 444
I DFG+ + T GT Y+APE LG + + + D +S+G+LL EM
Sbjct: 157 HIKIADFGMCKENMLGDAKTNEFC----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 445 VTTKKP 450
+ + P
Sbjct: 213 LIGQSP 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + ++ K LTL
Sbjct: 86 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 196
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + ++ K LTL
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 205
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + ++ K LTL
Sbjct: 132 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 242
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + ++ K LTL
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 205
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRH 287
D F ++G GSFG V E G + A+KV+ + + + M E + L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
+ + C FQ D V +++ G L + Q+ R + +
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHI------QKSRRFDEARARFY--- 129
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A ++ SAL +LH + I++ DLK N+LLD++ + DFG+ + + + N ++
Sbjct: 130 --AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTA 182
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT Y+APE D ++ G+LL EM+ P
Sbjct: 183 TFC--GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYKGV---FDEDGTVVAIKV-INLQRQGASK----SFMAECKALKNI-RHKN 289
+G G+FG V D+D A+ V + + + A++ ++E + +K I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV Y G+L ++L P + +I +++T
Sbjct: 103 IINLLGACT----QDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 345 QRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FY 397
+S +A ++YL Q C +H DL N+L+ + I DFGL+R +Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ +N R + ++APE + DV+S+G+L+ E+ T
Sbjct: 214 KKTTNG--------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + ++ K LTL
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDXV 205
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + S FQ +D V +Y G L L + + DR R
Sbjct: 213 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----------ARFYG 257
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ SALDYLH ++ +++ DLK N++LD D I DFGL + + + + +
Sbjct: 258 A-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTF 312
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 313 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 233 FSSTNLIGVGSFGSVY---KGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALKNI 285
F ++G G +G V+ K G + A+KV+ ++ + AE L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H +V +I + FQ ++ +Y+ G L L + I D L
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMED-----TACFYLA 128
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
IS+A L +LHQ + I++ DLKP NI+L++ + DFGL + +++ + TV
Sbjct: 129 EISMA------LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTV 177
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GTI Y+APE + S + D +S G L+ +M+T P
Sbjct: 178 THTFC--GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 216
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L + ++ Q ++ + V AL
Sbjct: 217 ---YLVGDELWVVMEFLEGGALTDI------------VTHTRMNEEQIAAVCLAVLQALS 261
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 262 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 314
Query: 419 APE----YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE G EV D++S GI+++EMV + P
Sbjct: 315 APELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 346
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIK--VINLQRQGASKSFMAECKALKN 284
++ + + + L+G GS+G V K + G +VAIK + + + K M E K LK
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW-LHPDAIPQRDREIEIQKLTL 343
+RH+NLV ++ C +V++++ + L+ L P+ + + ++ + L
Sbjct: 81 LRHENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFPNGL-----DYQVVQKYL 130
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
Q + + + + H H I+H D+KP NIL+ + DFG +R A
Sbjct: 131 FQ-------IINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGE 179
Query: 404 TVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEM 444
+ R Y APE +G + DV++ G L+ EM
Sbjct: 180 VYDDEVATR---WYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G +VA+K + + F E + LK + +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 76
Query: 295 TSCSSVDF-QGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR-EIEIQKLTLLQRISIAID 352
V + G +V +Y+P+G L +L QR R ++ +L L +
Sbjct: 77 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLL-----YSSQ 122
Query: 353 VASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+ ++YL + C +H DL NIL++++ I DFGL++ + V G
Sbjct: 123 ICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG- 177
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I + APE + S DV+S+G++L E+ T
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + S FQ +D V +Y G L L + + DR R
Sbjct: 210 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----------ARFYG 254
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ SALDYLH ++ +++ DLK N++LD D I DFGL + + + + +
Sbjct: 255 A-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTF 309
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 310 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR---QGASKSFMAECKALKNIRH 287
D F IG GSFG V ++ + A+K +N Q+ + ++ E + ++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV + S FQ + +V + G L L Q++ + + + L
Sbjct: 75 PFLVNLWYS-----FQDEEDMFMVVDLLLGGDLRYHL------QQNVHFKEETVKLF--- 120
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
++ ALDYL + I+H D+KP NILLD HI DF + A P +
Sbjct: 121 --ICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNI-----AAMLPRETQ 170
Query: 408 SIGVRGTIGYVAPEY---GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT Y+APE G+ S D +S G+ E++ ++P
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G IV ++ G+L +L + +P + E ++ K LTL
Sbjct: 96 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPE-DLYKDFLTLEHL 150
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 205
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G +VA+K + + F E + LK + +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 77
Query: 295 TSCSSVDF-QGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR-EIEIQKLTLLQRISIAID 352
V + G +V +Y+P+G L +L QR R ++ +L L +
Sbjct: 78 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLL-----YSSQ 123
Query: 353 VASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+ ++YL + C +H DL NIL++++ I DFGL++ + V G
Sbjct: 124 ICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG- 178
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I + APE + S DV+S+G++L E+ T
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 239 IGVGSFGSV----YKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVI 294
+G G+FGSV Y + D G +VA+K + + F E + LK + +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 89
Query: 295 TSCSSVDF-QGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR-EIEIQKLTLLQRISIAID 352
V + G +V +Y+P+G L +L QR R ++ +L L +
Sbjct: 90 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLL-----YSSQ 135
Query: 353 VASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+ ++YL + C +H DL NIL++++ I DFGL++ + V G
Sbjct: 136 ICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG- 190
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ I + APE + S DV+S+G++L E+ T
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGA-SKSFMAECKALKNIRHKNLVR 292
+G FG VYKG E VAIK + + +G + F E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL-----HPDAIPQRDREIEIQKLTLLQRI 347
++ + + ++++ Y +G L ++L H D D L +
Sbjct: 94 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQAVS 401
+ +A+ ++YL H ++H DL N+L+ + L+ I D GL R +Y+ +
Sbjct: 149 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
N + I ++APE + + S + D++SYG++L E+ +
Sbjct: 206 NSLLP--------IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 139
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L + ++ Q ++ + V AL
Sbjct: 140 ---YLVGDELWVVMEFLEGGALTDI------------VTHTRMNEEQIAAVCLAVLQALS 184
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 237
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+++EMV + P
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIR 286
+D + ++G GSFG V G A+KVI+ ++++ +S + E + LK +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N+ ++ F+ + +V + G L D I R R E+ ++++
Sbjct: 85 HPNIXKLYEF-----FEDKGYFYLVGEVYTGGEL-----FDEIISRKRFSEVDAARIIRQ 134
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
V S + Y H++ I+H DLKP N+LL++ D + I DFGLS ++A +
Sbjct: 135 ------VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SK 183
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
I GT Y+APE G+ DV+S G++L
Sbjct: 184 KXKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 238 LIGVGSFGSVYKGV---FDEDGTVVAIKVINLQRQGAS---KSFMAECKALKNI-RHKNL 290
++G G+FG V + G + + V L+ + S ++ M+E K + + H+N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK---------- 340
V ++ +C+ G + ++++Y G L +L + EIE +
Sbjct: 112 VNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 341 --LTLLQRISIAIDVASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
LT + A VA +++L + C +H DL N+L+ + I DFGL+R
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGILL E+ +
Sbjct: 223 MSDSNYVVRGN--ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 126
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 181
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 182 -----TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 126
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 181
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 182 -----TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + S FQ +D V +Y G L L + + DR R
Sbjct: 71 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----------ARFYG 115
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ SALDYLH ++ +++ DLK N++LD D I DFGL + + + +
Sbjct: 116 A-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXF 170
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 171 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + S FQ +D V +Y G L L + + DR R
Sbjct: 70 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----------ARFYG 114
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ SALDYLH ++ +++ DLK N++LD D I DFGL + + + +
Sbjct: 115 A-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXF 169
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 170 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGA-SKSFMAECKALKNIRHKNLVR 292
+G FG VYKG E VAIK + + +G + F E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL-----HPDAIPQRDREIEIQKLTLLQRI 347
++ + + ++++ Y +G L ++L H D D L +
Sbjct: 77 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQAVS 401
+ +A+ ++YL H ++H DL N+L+ + L+ I D GL R +Y+ +
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
N + I ++APE + + S + D++SYG++L E+ +
Sbjct: 189 NSLL--------PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 126
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 181
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 182 -----TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + S FQ +D V +Y G L L + + DR R
Sbjct: 72 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----------ARFYG 116
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ SALDYLH ++ +++ DLK N++LD D I DFGL + + + +
Sbjct: 117 A-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXF 171
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 172 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 94
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L D + ++ Q ++ + V AL
Sbjct: 95 ---YLVGDELWVVMEFLEGGALT-----DIVTH-------TRMNEEQIAAVCLAVLQALS 139
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 192
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+++EMV + P
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 96
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L D + ++ Q ++ + V AL
Sbjct: 97 ---YLVGDELWVVMEFLEGGALT-----DIVTH-------TRMNEEQIAAVCLAVLQALS 141
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 194
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+++EMV + P
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 85
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L D + ++ Q ++ + V AL
Sbjct: 86 ---YLVGDELWVVMEFLEGGALT-----DIVTH-------TRMNEEQIAAVCLAVLQALS 130
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 183
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+++EMV + P
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 137 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 249 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G +VA+K ++L++Q + E +++ +H+N+V + S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 89
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
+ D +V +++ G+L D + ++ Q ++ + V AL
Sbjct: 90 ---YLVGDELWVVMEFLEGGALT-----DIVTH-------TRMNEEQIAAVCLAVLQALS 134
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
LH + ++H D+K +ILL +D + DFG F VS V + GT ++
Sbjct: 135 VLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSK-EVPRRKXLVGTPYWM 187
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE D++S GI+++EMV + P
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 233 FSSTNLIGVGSFGSVY---KGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALKNI 285
F ++G G +G V+ K G + A+KV+ ++ + AE L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H +V +I + FQ ++ +Y+ G L L + I D L
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMED-----TACFYLA 128
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTV 405
IS+A L +LHQ + I++ DLKP NI+L++ + DFGL + +++ + TV
Sbjct: 129 EISMA------LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTV 177
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GTI Y+APE + S + D +S G L+ +M+T P
Sbjct: 178 THXFC--GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + IG G++GSV + G VA+K ++ Q +K E +
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 124
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-- 179
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 180 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 30/225 (13%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAI-----PQRDREIEIQKL 341
++ ++ +C+ Q IV +Y G+L ++L P + P + E ++L
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPE---EQL 147
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
+ +S A VA ++YL + +H DL N+L+ D I DFGL+R +
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ R + ++APE + DV+S+G+LL E+ T
Sbjct: 205 --XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G +A+K ++ Q +K E +
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T +S++ + ND + + + L + ++
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLE-EFNDVYLVTH--LMGADL------------NNIVKC 148
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 203
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 204 -----TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 24/232 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAEC 279
M + + + F +L+G G++G V G +VAIK I + + + E
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
K LK+ +H+N++ + F+ + I+ + M LH R I Q
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--------RVISTQ 107
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L+ A+ LH ++H DLKPSN+L++++ + DFGL+R
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 400 V----SNPTVSSS--IGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEM 444
S PT S + T Y APE L S + S DV+S G +L E+
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 208 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ--GASKSFMAECKALKNIRHKNLVRVITS 296
IG G++G VYK + G A+K I L+++ G + + E LK ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V++++ + L+K L + + E K LLQ + +
Sbjct: 69 IHT-----KKRLVLVFEHL-DQDLKKLLD---VCEGGLESVTAKSFLLQ-------LLNG 112
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ Y H +LH DLKP N+L++ + I DFGL+R + + T+
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLW 165
Query: 417 YVAPEYGLGS-EVSTNGDVYSYGILLLEMV 445
Y AP+ +GS + ST D++S G + EMV
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G ++ ++ G+L +L + +P + ++ K LTL
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 196
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ--GASKSFMAECKALKNIRHKNLVRVITS 296
IG G++G VYK + G A+K I L+++ G + + E LK ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V++++ + L+K L + + E K LLQ + +
Sbjct: 69 IHT-----KKRLVLVFEHL-DQDLKKLLD---VCEGGLESVTAKSFLLQ-------LLNG 112
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ Y H +LH DLKP N+L++ + I DFGL+R + + T+
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLW 165
Query: 417 YVAPEYGLGS-EVSTNGDVYSYGILLLEMV 445
Y AP+ +GS + ST D++S G + EMV
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G ++ ++ G+L +L + +P + ++ K LTL
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV 196
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 239 IGVGSFGSVYKG-VFDEDGTVVAIKV-INLQRQGAS----KSFMAECKALKNI-RHKNLV 291
+G G+FG V + F D T V + + ++GA+ ++ M+E K L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP---DAIPQRDREIEIQK--LTLLQR 346
++ +C+ G ++ ++ G+L +L + +P + ++ K LTL
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
I + VA +++L +H DL NILL I DFGL+R +P
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV 196
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
R + ++APE + DV+S+G+LL E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 85 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 197 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 85 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 123
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R V++P
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLAR----VADP 176
Query: 404 TVSSS---IGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
+ T Y APE L S+ T D++S G +L EM++ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 239 IGVGSFGSVYKG-----VFDEDGTVVAIKVINLQRQGASKS-FMAECKALKNIRHKNLVR 292
IG G+FG V++ + E T+VA+K++ + ++ F E + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL------------HPD-AIPQRDREIEIQ 339
++ C+ ++++YM G L ++L H D + R
Sbjct: 115 LLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR---- 395
L+ +++ IA VA+ + YL + +H DL N L+ ++ I DFGLSR
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 396 --FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+Y+A N + I ++ PE + +T DV++YG++L E+ +
Sbjct: 227 ADYYKADGNDAIP--------IRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 88 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 200 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 208 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 32/230 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKN-- 284
LK D F ++G GSFG V+ F + AIK L++ EC ++
Sbjct: 14 LKIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRV 70
Query: 285 ----IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
H L + + FQ + V +Y+ G L + K
Sbjct: 71 LSLAWEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDLMYHIQ-----------SCHK 114
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
L + A ++ L +LH + I++ DLK NILLD D I DFG+ +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T GT Y+APE LG + + + D +S+G+LL EM+ + P
Sbjct: 172 DAKTNXFC----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI-----QKLTLL 344
++ ++ +C+ Q IV +Y G+L ++L P + ++L+
Sbjct: 89 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------FYQ 398
+S A VA ++YL + +H DL N+L+ D I DFGL+R +Y+
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+N R + ++APE + DV+S+G+LL E+ T
Sbjct: 201 KTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMX--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 125
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 180
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 181 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ L+ LH+ E I++ DLKP NILLD+ I D GL AV P +
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL-----AVHVPEGQTIK 343
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G GT+GY+APE + + D ++ G LL EM+ + P
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 85 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 123
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 181 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 121
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 176
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 177 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 105 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 143
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 144 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 201 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 42/231 (18%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAI-----PQRDREIEIQKL 341
++ ++ +C+ Q IV +Y G+L ++L P + P + E ++L
Sbjct: 81 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE---EQL 132
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------ 395
+ +S A VA ++YL + +H DL N+L+ D I DFGL+R
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+Y+ +N R + ++APE + DV+S+G+LL E+ T
Sbjct: 190 YYKKTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ--GASKSFMAECKALKNIRHKNLVRVITS 296
IG G++G VYK + G A+K I L+++ G + + E LK ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V++++ + L+K L + + E K LLQ + +
Sbjct: 69 IHT-----KKRLVLVFEHL-DQDLKKLLD---VCEGGLESVTAKSFLLQ-------LLNG 112
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIG 416
+ Y H +LH DLKP N+L++ + I DFGL+R + + T+
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLW 165
Query: 417 YVAPEYGLGS-EVSTNGDVYSYGILLLEMV 445
Y AP+ +GS + ST D++S G + EMV
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 85 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 123
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 181 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 115
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 170
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 171 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 85 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 123
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 181 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 42/231 (18%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVINLQRQGASKSF---MAECKALKNI-RHKN 289
+G G+FG V D+ V + V L+ K ++E + +K I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH---PDAI-----PQRDREIEIQKL 341
++ ++ +C+ Q IV +Y G+L ++L P + P + E ++L
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE---EQL 147
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR------ 395
+ +S A VA ++YL + +H DL N+L+ D I DFGL+R
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+Y+ +N R + ++APE + DV+S+G+LL E+ T
Sbjct: 205 YYKKTTNG--------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 124
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-- 179
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 180 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
A ++ L+ LH+ E I++ DLKP NILLD+ I D GL AV P +
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL-----AVHVPEGQTIK 343
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G GT+GY+APE + + D ++ G LL EM+ + P
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 125
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 180
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 181 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 124
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 179
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 180 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 124
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 179
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 180 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 139
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 194
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 195 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 139
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 194
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 195 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 118
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 173
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 174 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKCQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 185 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GS G V G VA+K+++L++Q + E +++ +H N+V + S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY- 111
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
G + ++ +++ G+L D + Q +L Q ++ V AL
Sbjct: 112 ---LVGEEL-WVLMEFLQGGALT-----DIVSQ-------VRLNEEQIATVCEAVLQALA 155
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYV 418
YLH + ++H D+K +ILL D + DFG + A + V + GT ++
Sbjct: 156 YLH---AQGVIHRDIKSDSILLTLDGRVKLSDFG----FCAQISKDVPKRKXLVGTPYWM 208
Query: 419 APEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
APE S +T D++S GI+++EMV + P
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECK 280
K + + F +IG G+FG V V A+K++N + ++ + F E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLH--PDAIPQRDREIEI 338
L N K + + + FQ ++ +V Y G L L D +P+ E+
Sbjct: 127 VLVNGDSKWITTLHYA-----FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE-----EM 176
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
+ L + + IAID L Y+H+ D+KP NIL+D + + DFG +
Sbjct: 177 ARFYLAEMV-IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSC--LK 224
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEY-----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + TV SS+ V GT Y++PE G D +S G+ + EM+ + P
Sbjct: 225 LMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 121
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 176
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 177 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 87 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 125
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 126 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 183 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKX 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 126
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 181
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 182 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 185 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 115
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 170
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 171 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKX 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 138
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 193
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 194 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 121
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 176
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 177 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 83 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 121
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 122 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 179 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 115
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 170
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 171 -----TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 117
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 172
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 173 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 93 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 131
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 132 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 189 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 85 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 123
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 181 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 116
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 171
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 172 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 83 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 121
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 122 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 179 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 142
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 197
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 198 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 131
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 186
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 187 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 116
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 171
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 172 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 139
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 194
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 195 -----TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 131
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 186
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 187 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 138
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 193
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 194 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 125
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 180
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 181 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 90 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 128
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 129 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 186 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 130
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 185
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 186 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 130
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-- 185
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 186 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 91 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 129
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 130 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 187 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 82 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 120
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 121 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 178 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 185 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 185 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 238 LIGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA---SKSFMAECKALKNIRHKNLVRV 293
++G G FG VY+GV+ + G + + V ++ + FM+E +KN+ H ++V++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
I + I+ + P G L +L +R++ L +L + ++ +
Sbjct: 79 IGIIEE------EPTWIIMELYPYGELGHYL------ERNK----NSLKVLTLVLYSLQI 122
Query: 354 ASALDYLHQ-HCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
A+ YL +C +H D+ NIL+ + +GDFGLSR+ + + + R
Sbjct: 123 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVTR 175
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
I +++PE +T DV+ + + + E+++ K
Sbjct: 176 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 238 LIGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA---SKSFMAECKALKNIRHKNLVRV 293
++G G FG VY+GV+ + G + + V ++ + FM+E +KN+ H ++V++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
I + I+ + P G L +L +R++ L +L + ++ +
Sbjct: 91 IGIIEE------EPTWIIMELYPYGELGHYL------ERNK----NSLKVLTLVLYSLQI 134
Query: 354 ASALDYLHQ-HCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
A+ YL +C +H D+ NIL+ + +GDFGLSR+ + + + R
Sbjct: 135 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVTR 187
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
I +++PE +T DV+ + + + E+++ K
Sbjct: 188 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 142
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 197
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 198 -----TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 229 ATDGFSSTNLIGVGSFGSVYKGVF-DEDGTVVAIKVINLQRQGA---SKSFMAECKALKN 284
A + ++G G FG VY+GV+ + G + + V ++ + FM+E +KN
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H ++V++I + I+ + P G L +L +R++ L +L
Sbjct: 66 LDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYL------ERNK----NSLKVL 109
Query: 345 QRISIAIDVASALDYLHQ-HCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ ++ + A+ YL +C +H D+ NIL+ + +GDFGLSR+ + +
Sbjct: 110 TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY---IEDE 162
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKK 449
+ R I +++PE +T DV+ + + + E+++ K
Sbjct: 163 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R V++P
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VADP 180
Query: 404 TVSSS---IGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
+ T Y APE L S+ T D++S G +L EM++ +
Sbjct: 181 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 90 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 128
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R V++P
Sbjct: 129 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VADP 181
Query: 404 TVSSS---IGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
+ T Y APE L S+ T D++S G +L EM++ +
Sbjct: 182 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 131
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 186
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 187 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 87 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 125
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 126 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 183 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
++ IG G++G V T VAIK I+ + Q + + E + L RH+N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 292 --RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
R I S+++ + + IV M E ++ KL Q++S
Sbjct: 105 GIRDILRASTLEAMRDVY--IVQDLM-------------------ETDLYKLLKSQQLSN 143
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+L++ I DFGL+R +
Sbjct: 144 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 201 TGFLTEXVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+ I +++ Q D + + + L K L + Q L+
Sbjct: 105 GINDIIRAPTIE-QMKDVYLVTH--LMGADLYKLL------------KTQHLSNDHICYF 149
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT--VSS 407
+ L Y+H +LH DLKPSN+LL+ I DFGL+R + T ++
Sbjct: 150 LYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
+ R Y APE L S+ T D++S G +L EM++ +
Sbjct: 207 YVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 44/245 (17%)
Query: 225 SLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKN 284
SL A+D F ++G G+FG V K D AIK I + S + ++E L +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLAS 58
Query: 285 IRHKNLVR----------VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDR 334
+ H+ +VR + ++V + F I +Y N +L +H + + Q+
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRD 116
Query: 335 EIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS 394
E L ++I AL Y+H + I+H +LKP NI +D + IGDFGL+
Sbjct: 117 EY----WRLFRQI------LEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 395 R-FYQAV------------SNPTVSSSIGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGIL 440
+ ++++ S+ ++S+I GT YVA E G+ + D YS GI+
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI---GTAXYVATEVLDGTGHYNEKIDXYSLGII 220
Query: 441 LLEMV 445
E +
Sbjct: 221 FFEXI 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 129
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 184
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 185 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 121
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH-- 176
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 177 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAEC 279
M + + + F +L+G G++G V G +VAIK I + + + E
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
K LK+ +H+N++ + F+ + I+ + M LH R I Q
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--------RVISTQ 107
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L+ A+ LH ++H DLKPSN+L++++ + DFGL+R
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 400 V----SNPTVSSS--IGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEM 444
S PT S T Y APE L S + S DV+S G +L E+
Sbjct: 165 SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAEC 279
M + + + F +L+G G++G V G +VAIK I + + + E
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
K LK+ +H+N++ + F+ + I+ + M LH R I Q
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--------RVISTQ 107
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQA 399
L+ A+ LH ++H DLKPSN+L++++ + DFGL+R
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 400 V----SNPTVSSS--IGVRGTIGYVAPEYGLGS-EVSTNGDVYSYGILLLEM 444
S PT S T Y APE L S + S DV+S G +L E+
Sbjct: 165 SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F +G GSFG V+ +G A+KV L+++ + LK + H N R
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKV--LKKEIVVR--------LKQVEHTNDER 57
Query: 293 VITSCSSV--------DFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
++ S + FQ ++ Y+ G L L + Q+
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-----------KSQRFPNP 106
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
A +V AL+YLH + I++ DLKP NILLD + I DFG +++ P
Sbjct: 107 VAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PD 158
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V+ + GT Y+APE + + D +S+GIL+ EM+ P
Sbjct: 159 VTYXLC--GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 125
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH-- 180
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 181 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 64 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 113
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 114 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 163
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 164 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAI+ I+ + Q + + E K L RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 89 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 127
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 185 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 38/227 (16%)
Query: 242 GSFGSVYKGVFDEDGTVVAIKVINLQ-RQGASKSFMAECKALKNIRHKNLVRVITS---C 297
G FG V+K + VA+K+ +Q +Q + E +L ++H+N+++ I +
Sbjct: 35 GRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRG 90
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
+SVD ++ + GSL +L + + + IA +A L
Sbjct: 91 TSVDVD----LWLITAFHEKGSLSDFLKANVVSWN------------ELCHIAETMARGL 134
Query: 358 DYLHQHC-------QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG 410
YLH+ + I H D+K N+LL N+L+A I DFGL+ ++A + + G
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA--GKSAGDTHG 192
Query: 411 VRGTIGYVAPEYGLGS-----EVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G+ + D+Y+ G++L E+ + D
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVI--------NLQRQGASKSFMAECKALKNIRHKNL 290
+G G++G V+K + G VVA+K I + QR + E +NI NL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI--VNL 74
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+ V+ + + D +V+ YM E LH I L + + +
Sbjct: 75 LNVLRADNDRDV------YLVFDYM-----ETDLHA--------VIRANILEPVHKQYVV 115
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY---QAVSN----- 402
+ + YLH +LH D+KPSNILL+ + + DFGLSR + + V+N
Sbjct: 116 YQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS 172
Query: 403 ------------PTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
P ++ + R Y APE LGS T G D++S G +L E++ K
Sbjct: 173 INENTENFDDDQPILTDYVATR---WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I D+GL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGT--VVAIKVIN---LQRQGASKSFMAECKA 281
+K TD F+ ++G GSFG V + D GT + AIK++ + + + M E +
Sbjct: 16 VKLTD-FNFLMVLGKGSFGKVM--LADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L + + + SC FQ D V +Y+ G L + ++ K
Sbjct: 73 LALLDKPPFLTQLHSC----FQTVDRLYFVMEYVNGGDLMYHIQ-----------QVGKF 117
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS 401
Q + A +++ L +LH+ I++ DLK N++LD++ I DFG+ + +
Sbjct: 118 KEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG 174
Query: 402 NPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
T GT Y+APE + D ++YG+LL EM+ + P D
Sbjct: 175 VTTREFC----GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-LQRQGASKSFMAECKALKNIRHKNLV 291
+++ + IG G++G V + + VAIK I+ + Q + + E K L RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 292 RV--ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS- 348
+ I +++ Q D VY I Q E ++ KL Q +S
Sbjct: 87 GINDIIRAPTIE-QMKD----VY----------------IVQDLMETDLYKLLKTQHLSN 125
Query: 349 -----IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
+ L Y+H +LH DLKPSN+LL+ I DFGL+R +
Sbjct: 126 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 404 T--VSSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T ++ + R Y APE L S+ T D++S G +L EM++ +
Sbjct: 183 TGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 130
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 184
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 185 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++S
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-- 194
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE S + D+++ G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++A ALD+LH I++ DLKP NILLD + + DFGLS+ +++ + + S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC- 187
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+APE + + D +S+G+L+ EM+T P
Sbjct: 188 -GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 130
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 184
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 185 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++A ALD+LH I++ DLKP NILLD + + DFGLS+ +++ + + S
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC- 188
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+APE + + D +S+G+L+ EM+T P
Sbjct: 189 -GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++A ALD+LH I++ DLKP NILLD + + DFGLS+ +++ + + S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC- 187
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT+ Y+APE + + D +S+G+L+ EM+T P
Sbjct: 188 -GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 78
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 131
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 132 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 185
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 186 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y V D + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P +LE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
+ R Y APE LG N D++S G ++ EMV K
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y V D + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P +LE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKTLEEFQDVYLV------MELMDANLXQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
+ R Y APE LG N D++S G ++ EMV K
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 81
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 134
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 135 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 188
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 189 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 142
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 143 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 196
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 197 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 96
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 149
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 150 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 203
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 204 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F ++G G+F V+ G + A+K I S E LK I+H+N+V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ ++ +V + + G L ++ L ++D + IQ+
Sbjct: 71 L-----EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----------- 114
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
V SA+ YLH++ I+H DLKP N+L + + I DFGLS+ Q N +S++
Sbjct: 115 -VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ---NGIMSTA 167
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
G T GYVAPE S D +S G++
Sbjct: 168 CG---TPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 142
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 143 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 196
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 197 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 83 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLXQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 85
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 138
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 139 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 192
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 193 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 130
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 184
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 185 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 149
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 150 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 207 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 163
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 221 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 122 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-KWP 177
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 437 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 479
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 480 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 535
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 536 VKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 90
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 143
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 144 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 197
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 198 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 163
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 164 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 221 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 164
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 165 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXIC 218
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 219 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 82
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 135
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 136 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 189
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 190 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F IG GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +YMP G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYMPGGDMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 90 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 140
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 141 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 198 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F IG GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +YMP G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYMPGGDMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 438 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 480
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 481 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 536
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 537 VKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + FQ +D V +Y G L + H R+R ++
Sbjct: 70 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 113
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+ +
Sbjct: 114 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTF 168
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 169 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + FQ +D V +Y G L + H R+R ++
Sbjct: 67 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 110
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+ +
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTF 165
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 166 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 98 ----CIGVSLQSLP-RFILMELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 148
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 206 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM-AECKALKNIRHKNLV 291
++ T +IG GSFG VY+ + G +VAIK + QG K+F E + ++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 292 RV-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
R+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ----- 130
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSI 409
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 --LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYI 183
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 184 CSR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 149
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 207 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 156
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 209
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 210 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 263
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 264 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 113 ----CIGVSLQSLP-RFILMELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 163
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 221 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 98 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 148
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 206 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 208 QPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ 267
+P E + + LL + K L G G+FG+V KG + V + V L+
Sbjct: 17 RPKEVYLDRKLLTLEDKEL-------------GSGNFGTVKKGYYQMKKVVKTVAVKILK 63
Query: 268 RQGASKSF----MAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW 323
+ + +AE ++ + + +VR+I C + + +V + G L K+
Sbjct: 64 NEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKY 117
Query: 324 LHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND 383
L Q++R ++ + + I + V+ + YL + +H DL N+LL
Sbjct: 118 L------QQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQ 163
Query: 384 LSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
A I DFGLS+ +A N + + G + + + APE + S+ DV+S+G+L+ E
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 208 QPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ 267
+P E + + LL + K L G G+FG+V KG + V + V L+
Sbjct: 17 RPKEVYLDRKLLTLEDKEL-------------GSGNFGTVKKGYYQMKKVVKTVAVKILK 63
Query: 268 RQGASKSF----MAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW 323
+ + +AE ++ + + +VR+I C + + +V + G L K+
Sbjct: 64 NEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKY 117
Query: 324 LHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND 383
L Q++R ++ + + I + V+ + YL + +H DL N+LL
Sbjct: 118 L------QQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQ 163
Query: 384 LSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
A I DFGLS+ +A N + + G + + + APE + S+ DV+S+G+L+ E
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 105 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 155
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 156 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 213 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + FQ +D V +Y G L + H R+R ++
Sbjct: 67 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 110
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+ +
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTF 165
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 166 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKS 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DFGL R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 93 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 135
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 136 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 191
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 192 VKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM-AECKALKNIRHKNLV 291
++ T +IG GSFG VY+ + G +VAIK + QG K+F E + ++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 292 RV-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
R+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ----- 130
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSI 409
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 --LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYI 183
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 184 CSR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 208 QPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ 267
+P E + + LL + K L G G+FG+V KG + V + V L+
Sbjct: 7 RPKEVYLDRKLLTLEDKEL-------------GSGNFGTVKKGYYQMKKVVKTVAVKILK 53
Query: 268 RQGASKSF----MAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKW 323
+ + +AE ++ + + +VR+I C + + +V + G L K+
Sbjct: 54 NEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKY 107
Query: 324 LHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND 383
L Q++R ++ + + I + V+ + YL + +H DL N+LL
Sbjct: 108 L------QQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQ 153
Query: 384 LSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
A I DFGLS+ +A N + + G + + + APE + S+ DV+S+G+L+ E
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 293 VITSCSSVDFQGNDFKAIVY-----KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
+ + + K +VY Y+P H Q I + KL + Q
Sbjct: 78 L----RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ-- 130
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVS 406
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V
Sbjct: 131 -----LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNV 180
Query: 407 SSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
S I R Y APE G ++ +++ DV+S G +L E++
Sbjct: 181 SXICSR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 76 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLXQVI 112
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAG 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 171 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 27/213 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D + +G G+FG V++ G A K + + ++ E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V + + F+ ++ ++Y++M G L EK E K++ + +
Sbjct: 111 VNLHDA-----FEDDNEMVMIYEFMSGGELFEKVAD-----------EHNKMSEDEAVEY 154
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNPTVSS 407
V L ++H++ +H DLKP NI+ S + DFGL+ A +P S
Sbjct: 155 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT----AHLDPKQSV 207
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ GT + APE G V D++S G+L
Sbjct: 208 KVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 122 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 177
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 105
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 158
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 159 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 212
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 213 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 115 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 165
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 166 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 223 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 164
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 165 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 218
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 219 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 83 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLXQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKN---LVRV 293
+G G++G+V V G VAIK + Q + +K E + LK++RH+N L+ V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 294 ITSCSSVDFQGNDFKAIVYKYMP--NGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
T ++D DF Y MP L K + + + + DR IQ L
Sbjct: 93 FTPDETLD----DFTDF-YLVMPFMGTDLGKLMKHEKLGE-DR---IQFLV--------Y 135
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+ L Y+H I+H DLKP N+ ++ D I DFGL+R QA S G
Sbjct: 136 QMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR--QADSE-----MXGX 185
Query: 412 RGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
T Y APE L T D++S G ++ EM+T K
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM-AECKALKNIRHKNLV 291
++ T +IG GSFG VY+ + G +VAIK + QG K+F E + ++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 292 RV-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
R+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYV-KLYMYQ----- 130
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSI 409
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 131 --LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXI 183
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 184 CSR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 115
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
KLT + + L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 116 AKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-- 170
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 171 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 77 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 113
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 172 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+ G V G VA+K ++ Q Q +K E LK + HKN++ ++
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ P +LE++ + +E+ L Q I + +D
Sbjct: 92 -----------------FTPQKTLEEFQDVYLV------MELMDANLCQVIHMELDHERM 128
Query: 357 LDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
L+Q H I+H DLKPSNI++ +D + I DFGL+R A +N ++ +
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYV 186
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
R Y APE LG + N D++S G ++ E+V
Sbjct: 187 VTR---YYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 84 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 120
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 178
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 179 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 83 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 76 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 112
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 170
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 171 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 113
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 166
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 167 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 220
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 221 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 84 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 120
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 178
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 179 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 73 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 115
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 116 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 171
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 172 VKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 82 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 118
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 119 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 176
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 177 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 83 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y V D + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P +LE++ + +E+ L Q I + +D
Sbjct: 127 LNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVIQMELDH 163
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT 221
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
+ R Y APE LG N D++S G ++ EMV K
Sbjct: 222 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
++ T +IG GSFG VY+ + G +VAIK + ++ ++ E + ++ + H N+VR
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 115
Query: 293 V-ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ SS + + + +V Y+P H Q I + KL + Q
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV-KLYMYQ------ 168
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
+ +L Y+H I H D+KP N+LLD D + + DFG ++ Q V S I
Sbjct: 169 -LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYIC 222
Query: 411 VRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G ++ +++ DV+S G +L E++
Sbjct: 223 SR---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y V D + VAIK ++ Q Q +K E +K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P +LE++ + +E+ L Q I
Sbjct: 77 KNIISLLNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVI 113
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 172 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y V D + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P +LE++ + +E+ L Q I + +D
Sbjct: 127 LNV-----------------FTPQKTLEEFQDVYLV------MELMDANLCQVIQMELDH 163
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT 221
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
+ R Y APE LG N D++S G ++ EMV K
Sbjct: 222 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 125 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRET----RPRPSQPSSLAMLDLLHVARD 175
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 176 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 233 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF----MAECKALKNIRHKNLVRVI 294
+G G+FG+V KG + V + V L+ + + +AE ++ + + +VR+I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
C + + +V + G L K+L Q++R ++ + + I + V+
Sbjct: 75 GICEAESWM------LVMEMAELGPLNKYL------QQNRHVKDKNI-----IELVHQVS 117
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+ YL + +H DL N+LL A I DFGLS+ +A N + + G +
Sbjct: 118 MGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWP 173
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLE 443
+ + APE + S+ DV+S+G+L+ E
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 139 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 189
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 190 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 247 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 118
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 119 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE-HR 174
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 27/213 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D + +G G+FG V++ G A K + + ++ E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRISI 349
V + + F+ ++ ++Y++M G L EK E K++ + +
Sbjct: 217 VNLHDA-----FEDDNEMVMIYEFMSGGELFEKVAD-----------EHNKMSEDEAVEY 260
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNPTVSS 407
V L ++H++ +H DLKP NI+ S + DFGL+ A +P S
Sbjct: 261 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT----AHLDPKQSV 313
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ GT + APE G V D++S G+L
Sbjct: 314 KV-TTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 116 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 166
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG++R Y+A +
Sbjct: 167 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 224 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKFSLDLASLILYAYQLS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + S +
Sbjct: 122 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG---KLP 175
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G+ G V V VA+K+++++R ++ E K + H+
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 114
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 115 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 165 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKALKNIRHKN 289
D F +G G+FG V+ G IK IN R Q + AE + LK++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRIS 348
++++ F+ IV + G L E+ + A R + + + L +
Sbjct: 82 IIKIFEV-----FEDYHNMYIVMETCEGGELLERIVSAQA---RGKALSEGYVAELMK-- 131
Query: 349 IAIDVASALDYLH-QHCQEPILHCDLKPSNILLDNDLSAH----IGDFGLSRFYQAVSNP 403
+ +AL Y H QH ++H DLKP NIL D S H I DFGL+ +++ +
Sbjct: 132 ---QMMNALAYFHSQH----VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
T ++ GT Y+APE +V+ D++S G+++ ++T
Sbjct: 184 TNAA-----GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLT 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 122 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 175
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 106 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 149
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 150 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 203
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 128
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 129 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE-HR 184
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQ-GASKSFMAECKALKNIRHK 288
+ + +G G++G V V VA+K+++++R ++ E + H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPD-AIPQRDREIEIQKLTLLQRI 347
N+V+ +GN + + +Y G L + PD +P+ D + +L
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----- 115
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
+ + YLH I H D+KP N+LLD + I DFGL+ ++ + + +
Sbjct: 116 -------AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTKKPTD 452
+ GT+ YVAPE E DV+S GI+L M+ + P D
Sbjct: 166 KMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + FQ +D V +Y G L + H R+R ++
Sbjct: 67 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 110
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXF 165
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 166 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I DF L+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VAIK+I+ + + + E + +K + H N+V++
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ ++ +Y G + +L R +E E + S + SA
Sbjct: 80 IET-----EKTLYLIMEYASGGEVFDYLVAHG---RMKEKEAR--------SKFRQIVSA 123
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ + I+H DLK N+LLD D++ I DFG S + TV + G+
Sbjct: 124 VQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF------TVGGKLDTFCGSP 174
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + + FQ +D V +Y G L + H R+R ++
Sbjct: 67 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 110
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXF 165
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 166 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + FQ +D V +Y G L + H R+R ++
Sbjct: 67 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 110
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXF 165
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 166 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++S
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-- 191
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 80 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 123
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 124 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 177
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 32/230 (13%)
Query: 231 DGFSSTNLIGVGSFGSVY---KGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALK 283
+ F ++G G++G V+ K + G + A+KV+ +Q+ ++ E + L+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
+IR + + FQ ++ Y+ G L + H + QR+R E
Sbjct: 114 HIRQSPFLVTLHYA----FQTETKLHLILDYINGGEL--FTH---LSQRERFTE------ 158
Query: 344 LQRISIAI-DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
+ I + ++ AL++LH+ I++ D+K NILLD++ + DFGLS+ + V++
Sbjct: 159 -HEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF--VAD 212
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNG--DVYSYGILLLEMVTTKKP 450
T + GTI Y+AP+ G + + D +S G+L+ E++T P
Sbjct: 213 ET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 83 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 126
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 127 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 180
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 81 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 124
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 125 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 178
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 75 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 118
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 119 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 172
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKYSLDLASLILYAYQLS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 122 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 175
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++S
Sbjct: 141 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-- 195
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F L+G G+FG V G A+K++ + A + E + L+N RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
L + + FQ +D V +Y G L + H R+R ++
Sbjct: 72 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHL----SRERVFTEERARFY----- 115
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
++ SAL+YLH +++ D+K N++LD D I DFGL + + +S+
Sbjct: 116 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXF 170
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT Y+APE ++ D + G+++ EM+ + P
Sbjct: 171 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I FGL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I D GL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I D GL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 32/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKA 281
K+ + + S +G G++GSV + G VAIK ++ Q + +K E
Sbjct: 35 KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 94
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T SS+ DF Y MP ++ D E
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLR-NFYDF----YLVMP------FMQTDLQKIMGMEFSE 143
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
+K+ L + L Y+H ++H DLKP N+ ++ D I DFGL+R
Sbjct: 144 EKIQYL-----VYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
A G T Y APE L + D++S G ++ EM+T K
Sbjct: 196 A-------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 128
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 129 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-HR 184
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKN 284
K + F ++G GSF +V AIK++ ++ ++ E +
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H V++ + FQ ++ Y NG L K++ R+I T
Sbjct: 67 LDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC- 111
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
R A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S
Sbjct: 112 TRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 167
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ GT YV+PE + D+++ G ++ ++V P
Sbjct: 168 RANXFV--GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 118
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 119 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-HR 174
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VAIK+I+ + + + E + +K + H N+V++
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ ++ +Y G + +L R +E E + S + SA
Sbjct: 83 IET-----EKTLYLIMEYASGGEVFDYLVAHG---RMKEKEAR--------SKFRQIVSA 126
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI-GVRGTI 415
+ Y HQ + I+H DLK N+LLD D++ I DFG S + TV + G
Sbjct: 127 VQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF------TVGGKLDAFCGAP 177
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 118
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 119 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-HR 174
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKN 284
K + F ++G GSF +V AIK++ ++ ++ E +
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H V++ + FQ ++ Y NG L K++ R+I T
Sbjct: 64 LDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC- 108
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
R A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S
Sbjct: 109 TRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 164
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ GT YV+PE + D+++ G ++ ++V P
Sbjct: 165 RANXFV--GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKN 284
K + F ++G GSF +V AIK++ ++ ++ E +
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H V++ + FQ ++ Y NG L K++ R+I T
Sbjct: 66 LDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC- 110
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
R A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S
Sbjct: 111 TRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 166
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ GT YV+PE + D+++ G ++ ++V P
Sbjct: 167 RANXFV--GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKN 284
K + F ++G GSF +V AIK++ ++ ++ E +
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H V++ + FQ ++ Y NG L K++ R+I T
Sbjct: 65 LDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC- 109
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
R A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S
Sbjct: 110 TRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 165
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ GT YV+PE + D+++ G ++ ++V P
Sbjct: 166 RANXFV--GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 122
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 123 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-HR 178
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 217 ALLKM-SYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGASK 273
ALLK S+ D + IG G++G V G VAIK I +K
Sbjct: 39 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 98
Query: 274 SFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAI-VYKYMPNGSLEKWLHPDAIPQR 332
+ E K LK+ +H N++ I +FK++ V + L + +H
Sbjct: 99 RTLRELKILKHFKHDNII-AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----- 152
Query: 333 DREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFG 392
Q LTL + L Y+H ++H DLKPSN+L++ + IGDFG
Sbjct: 153 ------QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203
Query: 393 LSRFYQAVSNPTVSSSIGVR--GTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTKK 449
++R ++P T Y APE L E + D++S G + EM+ ++
Sbjct: 204 MAR--GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
+ ++IG G V + V G A+K++ + + S + E + R +++R
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR-RETHILR 154
Query: 293 VITSCSSV-----DFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
+ + ++ + F +V+ M G L +L E L+ +
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-----------TEKVALSEKETR 203
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
SI + A+ +LH + I+H DLKP NILLD+++ + DFG S +
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR--- 257
Query: 408 SIGVRGTIGYVAPEY----------GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT GY+APE G G EV D+++ G++L ++ P
Sbjct: 258 --ELCGTPGYLAPEILKCSMDETHPGYGKEV----DLWACGVILFTLLAGSPP 304
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDG--TV-VAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVR 292
+G GSFG V +G +D TV VA+K + L + A F+ E A+ ++ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS-IAI 351
+ + + +V + P GSL DR + Q LL +S A+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 122
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
VA + YL + +H DL N+LL IGDFGL R + V
Sbjct: 123 QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-HR 178
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + APE S D + +G+ L EM T
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGL------SRFYQAV 400
+ I I +A A+++LH + ++H DLKPSNI D +GDFGL Q V
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 401 SN--PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
P ++ G GT Y++PE G+ S D++S G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL-QRQGASKSFMAECKALKNIRHKNLV 291
F +G G FG V++ D AIK I L R+ A + M E KAL + H +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 292 R 292
R
Sbjct: 68 R 68
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+K+I+ + +S + E + +K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDTFCGSP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 225 SLLKATD------GFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFM 276
S+ ATD + IG G+F V G VA+K+I+ + + +
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 277 AECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREI 336
E + +K + H N+V++ + +V +Y G + +L R +E
Sbjct: 63 REVRIMKILNHPNIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEK 114
Query: 337 EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF 396
E + + + SA+ Y HQ I+H DLK N+LLD D++ I DFG S
Sbjct: 115 EAR--------AKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNE 163
Query: 397 YQAVSNPTVSSSIGVR-GTIGYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
+ TV + + G+ Y APE G + DV+S G++L +V+ P D
Sbjct: 164 F------TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F IG GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+K+I+ + +S + E + +K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDTFCGSP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKA 281
K++ + + + + + +G G++GSV + G VA+K ++ Q +K E +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
LK+++H+N L+ V T S++ + ND + + + L + ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTH--LMGADL------------NNIVKC 119
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
QKLT + + L Y+H I+H DLKPSN+ ++ D I D GL+R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARH-- 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
T G T Y APE L + D++S G ++ E++T +
Sbjct: 175 -----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 217 ALLKM-SYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGASK 273
ALLK S+ D + IG G++G V G VAIK I +K
Sbjct: 40 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 274 SFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAI-VYKYMPNGSLEKWLHPDAIPQR 332
+ E K LK+ +H N++ I +FK++ V + L + +H
Sbjct: 100 RTLRELKILKHFKHDNII-AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----- 153
Query: 333 DREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFG 392
Q LTL + L Y+H ++H DLKPSN+L++ + IGDFG
Sbjct: 154 ------QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 204
Query: 393 LSRFYQAVSNPTVSSSIGVR--GTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTKK 449
++R ++P T Y APE L E + D++S G + EM+ ++
Sbjct: 205 MAR--GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 94 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 137
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 138 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 187
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 122 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 165
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 166 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 215
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S +++
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF-- 192
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 237 NLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVI 294
LIG G FG VY G + + VAI++I+++R K+F E A + RH+N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+C S AI+ +L + RD +I L + + IA ++
Sbjct: 96 GACMS-----PPHLAIITSLCKGRTLYSVV-------RDAKI---VLDVNKTRQIAQEIV 140
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-G 413
+ YLH + ILH DLK N+ DN I DFGL + + ++ G
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNG 196
Query: 414 TIGYVAPE--YGLGSEV-------STNGDVYSYGILLLEMVTTKKP 450
+ ++APE L + S + DV++ G + E+ + P
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFL----------QVRKFSLDLASLILYAYQLS 501
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ ++ +GDFGLSR+ + + T + +
Sbjct: 502 TALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLP 555
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 83 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ + + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMEPEVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 239 IGVGSFGSVYKGVF-----DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVR 292
+G G+FG VY+G D VA+K + + + F+ E + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C V Q + I+ + M G L+ +L R R + L +L + +A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRE----TRPRPSQPSSLAMLDLLHVARD 149
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLD---NDLSAHIGDFGLSR-FYQAVSNPTVSSS 408
+A YL ++ +H D+ N LL A IGDFG+++ Y+A +
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + ++ PE + ++ D +S+G+LL E+ +
Sbjct: 207 M---LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRVITS 296
IG G+ G V G VA+K ++ Q Q +K E LK + HKN++ ++
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ P +LE++ + +E+ L Q I + +D
Sbjct: 90 -----------------FTPQKTLEEFQDVYLV------MELMDANLCQVIHMELDHERM 126
Query: 357 LDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
L+Q H I+H DLKPSNI++ +D + I DFGL+R A +N ++ +
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYV 184
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
R Y APE LG N D++S G ++ E+V
Sbjct: 185 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIR 286
+D + +G G++G V G AIK+I ++ S + + E LK +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ +V + G L D I QK + +
Sbjct: 80 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL-----------FDEIILRQKFSEVDA 123
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
I V S YLH+H I+H DLKP N+LL++ D I DFGLS ++
Sbjct: 124 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----- 175
Query: 404 TVSSSIGVR-GTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
V + R GT Y+APE L + DV+S G++L
Sbjct: 176 -VGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVIL 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRH 287
TD + IG G+F V + V G A K+IN ++ A + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N+VR+ S S F +V+ + G L + I R+ E +Q+I
Sbjct: 63 SNIVRLHDSISE-----EGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIQQI 112
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDL---SAHIGDFGLSRFYQAVSNPT 404
A+ LH H Q ++H DLKP N+LL + + + DFGL+ Q
Sbjct: 113 LEAV--------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-- 161
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE D+++ G++L ++ P
Sbjct: 162 --AWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+K+I+ + +S + E + +K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDAFCGAP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 35/272 (12%)
Query: 190 VMVSFFIFSWHKRSRPSRQPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYK 249
V+V + H R + +E + K + + F +IG G+FG V
Sbjct: 49 VLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAV 108
Query: 250 GVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGND 306
+ A+K++N + ++ + F E L N + IT+ FQ +
Sbjct: 109 VKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----GDCQWITALHYA-FQDEN 163
Query: 307 FKAIVYKYMPNGSLEKWL--HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
+V Y G L L D +P+ I ++ L AID L Y+H+
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL------AIDSIHQLHYVHR-- 215
Query: 365 QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEY-- 422
D+KP N+LLD + + DFG + + TV SS+ V GT Y++PE
Sbjct: 216 -------DIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAV-GTPDYISPEILQ 265
Query: 423 ----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G+G + D +S G+ + EM+ + P
Sbjct: 266 AMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL---QRQGASKSFMAECKALKNIRHKN 289
FS IG GSFG+VY + VVAIK ++ Q + + E + L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++ C + +V +Y GS L P ++ EI LQ
Sbjct: 116 TIQY-RGC----YLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQ---- 165
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
L YLH H ++H D+K NILL +GDFG S A +N V
Sbjct: 166 ------GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXFV---- 211
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNG--DVYSYGILLLEMVTTKKP 450
GT ++APE L E +G DV+S GI +E+ K P
Sbjct: 212 ---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I +
Sbjct: 94 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFXEPHAR 137
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 138 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 187
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 223 YKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKA 281
+K D + +++G G+F V +VAIK I + +G S E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L I+H N+V + ++ ++ + + G L DR +E
Sbjct: 70 LHKIKHPNIVALDDI-----YESGGHLYLIMQLVSGGEL-----------FDRIVEKGFY 113
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNIL---LDNDLSAHIGDFGLSRFYQ 398
T + V A+ YLH I+H DLKP N+L LD D I DFGLS+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--- 167
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ +P S GT GYVAPE S D +S G++
Sbjct: 168 -MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 223 YKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKA 281
+K D + +++G G+F V +VAIK I + +G S E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L I+H N+V + ++ ++ + + G L DR +E
Sbjct: 70 LHKIKHPNIVALDDI-----YESGGHLYLIMQLVSGGEL-----------FDRIVEKGFY 113
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNIL---LDNDLSAHIGDFGLSRFYQ 398
T + V A+ YLH I+H DLKP N+L LD D I DFGLS+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--- 167
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ +P S GT GYVAPE S D +S G++
Sbjct: 168 -MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 122 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV- 177
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 178 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNI 285
K +D + +G G+F V + V G A K+IN ++ A + E + + +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H N+VR+ S Q F +V+ + G L + I R+ E +Q
Sbjct: 62 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQ 111
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSN 402
+I ++ Y H + I+H +LKP N+LL + + + DFGL A+
Sbjct: 112 QI------LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL-----AIEV 157
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE S D+++ G++L ++ P
Sbjct: 158 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNI 285
K +D + +G G+F V + V G A K+IN ++ A + E + + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H N+VR+ S Q F +V+ + G L + I R+ E +Q
Sbjct: 63 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQ 112
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSN 402
+I ++ Y H + I+H +LKP N+LL + + + DFGL A+
Sbjct: 113 QI------LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL-----AIEV 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE S D+++ G++L ++ P
Sbjct: 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 12 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 113
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 168
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEMV 445
GT Y+APE S E D+Y+ G++ E+
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 194
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 45/228 (19%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G++GSV K V G ++A+K I +S + E + + + ++V + C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--------RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 299 S-VDFQGNDFKA----IVYKYMPNGSLEKWLH------PDAIPQRDREIEIQKLTLLQRI 347
V F G F+ I + M + S +K+ D IP+ +L +I
Sbjct: 82 YIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEE----------ILGKI 130
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
++A AL++L ++ + I+H D+KPSNILLD + + DFG+S Q V + +
Sbjct: 131 TLA--TVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISG--QLVDSIAKTR 184
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLLEMVTTKKP 450
G R Y+APE + S G DV+S GI L E+ T + P
Sbjct: 185 DAGCR---PYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNI 285
K +D + +G G+F V + V G A K+IN ++ A + E + + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H N+VR+ S Q F +V+ + G L + I R+ E +Q
Sbjct: 63 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQ 112
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSN 402
+I ++ Y H + I+H +LKP N+LL + + + DFGL A+
Sbjct: 113 QI------LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL-----AIEV 158
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE S D+++ G++L ++ P
Sbjct: 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRH 287
+ F ++G GSF +V AIK++ ++ ++ E + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
V++ + FQ ++ Y NG L K++ R+I T R
Sbjct: 92 PFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC-TRF 136
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 193 XF--VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 87 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 130
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG F + V T +
Sbjct: 131 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRTWT- 183
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT Y+APE L + D ++ G+L+ EM P
Sbjct: 184 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 194
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 192
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 194
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 192
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 50 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 151
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 206
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEMV 445
GT Y+APE S E D+Y+ G++ E+
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRH 287
+ F ++G GSF +V AIK++ ++ ++ E + + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
V++ + FQ ++ Y NG L K++ R+I T R
Sbjct: 95 PFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC-TRF 139
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 140 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 196 XF--VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRH 287
TD + +G G+F V + V A K+IN ++ A + E + + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N+VR+ S S F +V+ + G L + I R+ E + +I
Sbjct: 90 PNIVRLHDSISE-----EGFHYLVFDLVTGGELF-----EDIVAREYYSEADASHCIHQI 139
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDL---SAHIGDFGLSRFYQAVSNPT 404
+++++HQH I+H DLKP N+LL + + + DFGL+ Q
Sbjct: 140 ------LESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ-- 188
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE D+++ G++L ++ P
Sbjct: 189 --AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 35/272 (12%)
Query: 190 VMVSFFIFSWHKRSRPSRQPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYK 249
V+V + H R + +E + K + + F +IG G+FG V
Sbjct: 33 VLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAV 92
Query: 250 GVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGND 306
+ A+K++N + ++ + F E L N + IT+ FQ +
Sbjct: 93 VKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----GDCQWITALHYA-FQDEN 147
Query: 307 FKAIVYKYMPNGSLEKWL--HPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
+V Y G L L D +P+ I ++ L AID L Y+H+
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL------AIDSIHQLHYVHR-- 199
Query: 365 QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEY-- 422
D+KP N+LLD + + DFG + + TV SS+ V GT Y++PE
Sbjct: 200 -------DIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAV-GTPDYISPEILQ 249
Query: 423 ----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G+G + D +S G+ + EM+ + P
Sbjct: 250 AMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 194
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 145 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 199
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 191
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIRH 287
+ F ++G GSF +V AIK++ ++ ++ E + + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
V++ + FQ ++ Y NG L K++ R+I T R
Sbjct: 93 PFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETC-TRF 137
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A ++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 138 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 194 XF--VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+K+I+ + +S + E + +K + H N+V++
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDA-IPQRDREIEIQKLTLLQRISIAIDVAS 355
+ +V +Y G + +L + +++ + ++ + S
Sbjct: 75 IET-----EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------------IVS 117
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GT 414
A+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G+
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDTFCGS 168
Query: 415 IGYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 223 YKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKA 281
+K D + +++G G+F V +VAIK I + +G S E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L I+H N+V + ++ ++ + + G L DR +E
Sbjct: 70 LHKIKHPNIVALDDI-----YESGGHLYLIMQLVSGGEL-----------FDRIVEKGFY 113
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNIL---LDNDLSAHIGDFGLSRFYQ 398
T + V A+ YLH I+H DLKP N+L LD D I DFGLS+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--- 167
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ +P S GT GYVAPE S D +S G++
Sbjct: 168 -MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+++I+ + +S + E + +K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDTFCGSP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
++ SAL+YLH + I+H DLKP NILL+ D+ I DFG ++ S ++
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF-- 192
Query: 412 RGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT YV+PE + D+++ G ++ ++V P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL---QRQGASKSFMAECKALKNIRHKN 289
FS IG GSFG+VY + VVAIK ++ Q + + E + L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
++ C + +V +Y GS L P ++ EI LQ
Sbjct: 77 TIQY-RGC----YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQ---- 126
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
L YLH H ++H D+K NILL +GDFG S A +N V
Sbjct: 127 ------GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXFV---- 172
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNG--DVYSYGILLLEMVTTKKP 450
GT ++APE L E +G DV+S GI +E+ K P
Sbjct: 173 ---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG F + V T +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGRTWT- 198
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT Y+APE L + D ++ G+L+ EM P
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 83 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ + + R Y APE LG N D++S G ++ EMV K
Sbjct: 178 TSFMMEPEVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 88 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 124
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 125 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 182
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 183 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 14 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 115
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 170
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEMV 445
GT Y+APE S E D+Y+ G++ E+
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 223 YKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKA 281
+K D + +++G G+F V +VAIK I + +G S E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 282 LKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKL 341
L I+H N+V + ++ ++ + + G L DR +E
Sbjct: 70 LHKIKHPNIVALDDI-----YESGGHLYLIMQLVSGGEL-----------FDRIVEKGFY 113
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNIL---LDNDLSAHIGDFGLSRFYQ 398
T + V A+ YLH I+H DLKP N+L LD D I DFGLS+
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--- 167
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ +P S GT GYVAPE S D +S G++
Sbjct: 168 -MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 17 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 118
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 173
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEMV 445
GT Y+APE S E D+Y+ G++ E+
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 37 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 138
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 193
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEMV 445
GT Y+APE S E D+Y+ G++ E+
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI---NLQRQGASKSFMAECKALKNIR 286
+D + +G G++G V G AIK+I ++ S + + E LK +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H N++++ F+ +V + G L D I R QK + +
Sbjct: 63 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL-----FDEIILR------QKFSEVDA 106
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNP 403
I V S YLH+H I+H DLKP N+LL++ D I DFGLS ++
Sbjct: 107 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----- 158
Query: 404 TVSSSIGVR-GTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
V + R GT Y+APE L + DV+S G++L
Sbjct: 159 -VGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVIL 195
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 41/224 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G FG V++G + G VA+K+ + + + +S+ E + + + RH+N++ I +
Sbjct: 11 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ + +V Y +GSL +L+ + T+ I +A+ AS
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV------------TVEGMIKLALSTASG 112
Query: 357 LDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + + I D GL AV + + + +I +
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDI 167
Query: 412 R-----GTIGYVAPEYGLGS------EVSTNGDVYSYGILLLEM 444
GT Y+APE S E D+Y+ G++ E+
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKA 281
K+ + + S +G G++GSV + G VAIK ++ Q + +K E
Sbjct: 17 KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 76
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAIVYKYMP--NGSLEKWLHPDAIPQRDREI 336
LK+++H+N L+ V T SS+ DF Y MP L+K + + E
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLR-NFYDF----YLVMPFMQTDLQK-----IMGLKFSEE 126
Query: 337 EIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF 396
+IQ L + L Y+H ++H DLKP N+ ++ D I DFGL+R
Sbjct: 127 KIQYLVY--------QMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175
Query: 397 YQAVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
A G T Y APE L + D++S G ++ EM+T K
Sbjct: 176 ADA-------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 55/234 (23%)
Query: 233 FSSTNLIGVGSFGS-VYKGVFDEDGTVVAIKVINLQRQGASKSFMAEC-----KALKNIR 286
F +++G G+ G+ VY+G+FD R A K + EC + ++ +R
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFD-------------NRDVAVKRILPECFSFADREVQLLR 72
Query: 287 ----HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRD-REIEIQKL 341
H N++R C+ D Q F+ I + + +L+++ + Q+D + ++ +
Sbjct: 73 ESDEHPNVIRYF--CTEKDRQ---FQYIAIE-LCAATLQEY-----VEQKDFAHLGLEPI 121
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLD-----NDLSAHIGDFGLSRF 396
TLLQ+ + S L +LH I+H DLKP NIL+ + A I DFGL +
Sbjct: 122 TLLQQTT------SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
Query: 397 YQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG----DVYSYGILLLEMVT 446
AV + S GV GT G++APE L + N D++S G + +++
Sbjct: 173 L-AVGRHSFSRRSGVPGTEGWIAPEM-LSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL----------QVRKFSLDLASLILYAYQLS 121
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ +GDFGLSR+ + + T + +
Sbjct: 122 TALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRY---MEDSTYYKASKGKLP 175
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 77 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 113
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 171
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTK 448
++ ++ + R Y APE LG N D++S G ++ EMV K
Sbjct: 172 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVVAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G+++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 83 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
++ ++ + R Y APE LG N D++S G ++ EM+
Sbjct: 178 TSFMMTPEVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNI 285
K +D + +G G+F V + V G A K+IN ++ A + E + + +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H N+VR+ S Q F +V+ + G L + I R+ E +Q
Sbjct: 86 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQ 135
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSN 402
+I ++ Y H + I+H +LKP N+LL + + + DFGL A+
Sbjct: 136 QI------LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGL-----AIEV 181
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ G GT GY++PE S D+++ G++L
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFGL++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 27/210 (12%)
Query: 245 GSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQG 304
G ++KG + + VV + + S+ F EC L+ H N++ V+ +C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PP 80
Query: 305 NDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHC 364
++ + P GSL LH D+ Q + A+D A +L H
Sbjct: 81 APHPTLITHWXPYGSLYNVLHEGTNFVVDQS---------QAVKFALDXARGXAFL--HT 129
Query: 365 QEPIL-HCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYG 423
EP++ L ++ +D D +A I + +Q S G +VAPE
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQ---------SPGRXYAPAWVAPEAL 180
Query: 424 LGSEVSTN---GDVYSYGILLLEMVTTKKP 450
TN D +S+ +LL E+VT + P
Sbjct: 181 QKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G+++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+++I+ + +S + E + +K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHG---RMKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIG-VRGTI 415
+ Y HQ I+H DLK N+LLD D++ I DFG S + T + + G+
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDEFCGSP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 310 IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID-VASALDYLHQHCQEPI 368
I+Y+YM N S+ K+ + ++ I +Q I I V ++ Y+H ++ I
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIP----IQVIKCIIKSVLNSFSYIHN--EKNI 173
Query: 369 LHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI-GVRGTIGYVAPEYGLGSE 427
H D+KPSNIL+D + + DFG S + V I G RGT ++ PE+ +E
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESEY-------MVDKKIKGSRGTYEFMPPEF-FSNE 225
Query: 428 VSTNG---DVYSYGILLLEM 444
S NG D++S GI L M
Sbjct: 226 SSYNGAKVDIWSLGICLYVM 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFXEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFGL++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 51/229 (22%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
+G G +G V++G++ G VA+K+ + + + +S+ E + + RH N++ I S
Sbjct: 16 VGKGRYGEVWRGLWH--GESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ I + Y +GSL +L Q+ TL +++ + V++A
Sbjct: 71 DMTSRNSSTQLWLITH-YHEHGSLYDFL--------------QRQTLEPHLALRLAVSAA 115
Query: 357 LDYLHQHCQ-------EPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVS-------N 402
H H + I H D K N+L+ ++L I D GL+ + S N
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNN 175
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEM 444
P V GT Y+APE L ++ T+ D++++G++L E+
Sbjct: 176 PRV-------GTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 239 IGVGSFGSVYKGVF---DEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
IG G FG V++G++ + VAIK N + F+ E ++ H ++V++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ + I+ + G L +L ++ L L I A ++
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFL----------QVRKFSLDLASLILYAYQLS 501
Query: 355 SALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
+AL YL + +H D+ N+L+ +GDFGLSR+ + + T + +
Sbjct: 502 TALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRY---MEDSTYYKASKGKLP 555
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
I ++APE ++ DV+ +G+ + E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+P G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVPGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK----------VVKLKQIEHTLN 91
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y P G + L I + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFS 140
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--- 194
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQ 398
+ +T+ IS + VA +++L +H DL NILL + I DFGL+R
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLAR--D 248
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
NP R + ++APE ST DV+SYG+LL E+ +
Sbjct: 249 IYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 84 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 120
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 178
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
++ ++ + R Y APE LG N D++S G ++ EM+
Sbjct: 179 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 41/255 (16%)
Query: 208 QPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN-- 265
Q +EP++ + K + D F +IG G+F V + G V A+K++N
Sbjct: 44 QWAEPIV------VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW 97
Query: 266 -LQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWL 324
+ ++G F E L N + + ++ + FQ ++ +V +Y G L L
Sbjct: 98 DMLKRGEVSCFREERDVLVNGDRRWITQLHFA-----FQDENYLYLVMEYYVGGDLLTLL 152
Query: 325 HP--DAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN 382
+ IP E+ + L + I +AID L Y+H+ D+KP NILLD
Sbjct: 153 SKFGERIPA-----EMARFYLAE-IVMAIDSVHRLGYVHR---------DIKPDNILLDR 197
Query: 383 DLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPE-------YGLGSEVSTNGDVY 435
+ DFG +A + TV S + V GT Y++PE D +
Sbjct: 198 CGHIRLADFGSCLKLRA--DGTVRSLVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 436 SYGILLLEMVTTKKP 450
+ G+ EM + P
Sbjct: 255 ALGVFAYEMFYGQTP 269
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 83 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
++ ++ + R Y APE LG N D++S G ++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 83 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 119
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R A
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAG 177
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
++ ++ + R Y APE LG N D++S G ++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
+G G +G V++G + G VA+K+ + + + KS+ E + + RH+N++ I S
Sbjct: 45 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 99
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ I + Y GSL +L ++ L + + I + +AS
Sbjct: 100 DMTSRHSSTQLWLITH-YHEMGSLYDYL------------QLTTLDTVSCLRIVLSIASG 146
Query: 357 LDYLH-----QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + I D GL+ + +N +
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 412 RGTIGYVAPEYGLGSEVSTNG-------DVYSYGILLLEM 444
GT Y+APE L + + D++++G++L E+
Sbjct: 207 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 233 FSSTNLIGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRH 287
+ + IG G+ G V Y + + + VAIK ++ Q Q +K E +K + H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
KN++ ++ + P SLE++ + +E+ L Q I
Sbjct: 85 KNIIGLLNV-----------------FTPQKSLEEFQDVYIV------MELMDANLCQVI 121
Query: 348 SIAIDVASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
+ +D L+Q H I+H DLKPSNI++ +D + I DFGL+R
Sbjct: 122 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----- 176
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ T + T Y APE LG N D++S G ++ EM+
Sbjct: 177 TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-RHKNLV 291
F L+G G++G VYKG + G + AIKV+++ + E LK H+N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIA 84
Query: 292 RVITSCSSVDFQGNDFK-AIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+ + G D + +V ++ GS+ I+ K L+ IA
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL------------IKNTKGNTLKEEWIA 132
Query: 351 I---DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
++ L +LHQH ++H D+K N+LL + + DFG+S A + TV
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS----AQLDRTVGR 185
Query: 408 SIGVRGTIGYVAPEYGLGSE-----VSTNGDVYSYGILLLEMVTTKKP 450
GT ++APE E D++S GI +EM P
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALK 283
+KA D + +IG G+FG V V A+K+++ + ++ S F E +
Sbjct: 72 MKAED-YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
+V++ + FQ + + +V +YMP G L + +P++ + ++ L
Sbjct: 131 FANSPWVVQLFCA-----FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVL 185
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
ALD +H ++H D+KP N+LLD + DFG
Sbjct: 186 ------------ALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 404 TVSSSIGVRGTIGYVAPEY----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+++ GT Y++PE G D +S G+ L EM+ P
Sbjct: 231 HCDTAV---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK----------VVKLKQIEHTLN 91
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R+ + + F+ N +V +Y P G + L I + +
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-----------RIGRFS 140
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--- 194
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK----------VVKLKQIEHTLN 90
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y+ G + L I + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFS 139
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--- 193
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 194 ----RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 32/239 (13%)
Query: 217 ALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM 276
++++ +++ ++ TDG+ IGVGS+ + + A+K+I+ ++ ++
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE 67
Query: 277 AECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGS-LEKWLHPDAIPQRDRE 335
L+ +H N++ + + + +V + M G L+K L +R+
Sbjct: 68 I---LLRYGQHPNIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS 119
Query: 336 IEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDF 391
++ + ++YLH + ++H DLKPSNIL N S I DF
Sbjct: 120 ------------AVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 392 GLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G ++ +A + ++ T +VAPE D++S G+LL M+T P
Sbjct: 165 GFAKQLRAENGLLMTPCY----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G+ G V+K F + G V+A+K ++R G + L + + I C
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVK--QMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 299 SVDFQGND-FKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
D F A+ L+K + IP+R +L ++++AI AL
Sbjct: 91 GTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPER----------ILGKMTVAI--VKAL 137
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGY 417
YL + + ++H D+KPSNILLD + DFG+S + V + S G Y
Sbjct: 138 YYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISG--RLVDDKAKDRSAGC---AAY 190
Query: 418 VAPEY-----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+APE + DV+S GI L+E+ T + P
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
+G G +G V++G + G VA+K+ + + + KS+ E + + RH+N++ I S
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ I + Y GSL +L ++ L + + I + +AS
Sbjct: 71 DMTSRHSSTQLWLITH-YHEMGSLYDYL------------QLTTLDTVSCLRIVLSIASG 117
Query: 357 LDYLH-----QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + I D GL+ + +N +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 412 RGTIGYVAPEYGLGSEVSTNG-------DVYSYGILLLEM 444
GT Y+APE L + + D++++G++L E+
Sbjct: 178 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
+G G +G V++G + G VA+K+ + + + KS+ E + + RH+N++ I S
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ I + Y GSL +L ++ L + + I + +AS
Sbjct: 71 DMTSRHSSTQLWLITH-YHEMGSLYDYL------------QLTTLDTVSCLRIVLSIASG 117
Query: 357 LDYLH-----QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
L +LH + I H DLK NIL+ + I D GL+ + +N +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 412 RGTIGYVAPEYGLGSEVSTNG-------DVYSYGILLLEM 444
GT Y+APE L + + D++++G++L E+
Sbjct: 178 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK----------VVKLKQIEHTLN 90
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y+ G + L I + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFS 139
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--- 193
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 194 ----RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G ++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
IG G+F V G VA+K+I+ + +S + E + K + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+ +V +Y G + +L R +E E + + + SA
Sbjct: 82 IET-----EKTLYLVXEYASGGEVFDYLVAHG---RXKEKEAR--------AKFRQIVSA 125
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-GTI 415
+ Y HQ I+H DLK N+LLD D + I DFG S + T + + G
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF------TFGNKLDAFCGAP 176
Query: 416 GYVAPEYGLGSEVS-TNGDVYSYGILLLEMVTTKKPTD 452
Y APE G + DV+S G++L +V+ P D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 122 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 165
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG F + V T +
Sbjct: 166 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG---FAKRVKGATWT- 218
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ GT Y+APE L + D ++ G+L+ EM P
Sbjct: 219 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G ++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G ++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK----------VVKLKQIEHTLN 91
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y P G + L I + +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFS 140
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--- 194
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 278 ECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIE 337
E LK++ H N++++ F+ + +V ++ G L + I R + E
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGEL-----FEQIINRHKFDE 145
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDND---LSAHIGDFGLS 394
++++I S + YLH+H I+H D+KP NILL+N L+ I DFGLS
Sbjct: 146 CDAANIMKQI------LSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 395 RFYQAVSNPTVSSSIGVR---GTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
F+ S +R GT Y+APE L + + DV+S G+++
Sbjct: 197 SFF--------SKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 239 IGVGSFGSV---YKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKALKNIRHKNLVRV 293
IG G+ G V Y + + + VAIK ++ Q Q +K E +K + HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ + P SLE++ + +E+ L Q I + +D
Sbjct: 89 LNV-----------------FTPQKSLEEFQDVYIV------MELMDANLSQVIQMELDH 125
Query: 354 ASALDYLHQ------HCQEP-ILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
L+Q H I+H DLKPSNI++ +D + I DFGL+R A ++ ++
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT 183
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
+ R Y APE LG N D++S G ++ EM+
Sbjct: 184 PYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK----------VVKLKQIEHTLN 91
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y P G + L I + +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFS 140
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--- 194
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y P G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 41/245 (16%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVI--NLQRQGASKSFMAECKALKNIRHK 288
D + +LIG GS+G V + + VVAIK I + K + E L + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
++V+V+ D + D +V + + + +K P E+ I+ TLL +
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFR---TPVYLTELHIK--TLLYNLL 166
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
+ + Y+H ILH DLKP+N L++ D S + DFGL+R N
Sbjct: 167 VGVK------YVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP 217
Query: 409 IGVRG-----------------------TIGYVAPEYGLGSEVSTNG-DVYSYGILLLEM 444
I R T Y APE L E T DV+S G + E+
Sbjct: 218 ISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
Query: 445 VTTKK 449
+ K
Sbjct: 278 LNMIK 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 88 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 131
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 132 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-------R 181
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 39/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-N 289
D F +G GSFG V E G A+K+++ Q+ LK I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK----------VVKLKQIEHTLN 91
Query: 290 LVRVITSCS-------SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT 342
R++ + + F+ N +V +Y P G + L I +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFX 140
Query: 343 LLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSN 402
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--- 194
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 51/247 (20%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN--------------------------L 266
++ + IG GS+G V + D T A+KV++ +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 267 QRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP 326
Q +G + E LK + H N+V+++ +D D +V++ + G + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLV---EVLDDPNEDHLYMVFELVNQGPVME---- 127
Query: 327 DAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA 386
+P E Q Q D+ ++YLH + I+H D+KPSN+L+ D
Sbjct: 128 --VPTLKPLSEDQARFYFQ------DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHI 176
Query: 387 HIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG---DVYSYGILLLE 443
I DFG+S ++ S+ +S+++ GT ++APE + +G DV++ G+ L
Sbjct: 177 KIADFGVSNEFKG-SDALLSNTV---GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232
Query: 444 MVTTKKP 450
V + P
Sbjct: 233 FVFGQCP 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 102 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 145
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 146 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 195
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y P G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYAPGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFAEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
+ FS +IG G FG VY + G + A+K ++ +R K E AL +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNERIMLSL 245
Query: 291 VRV----ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
V C S F D + + M G L L + +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----------FSEADM 294
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPTV 405
A ++ L+++H +++ DLKP+NILLD I D GL+ F + + +V
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 406 SSSIGVRGTIGYVAPE-YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT GY+APE G ++ D +S G +L +++ P
Sbjct: 352 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
+ FS +IG G FG VY + G + A+K ++ +R K E AL +L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNERIMLSL 244
Query: 291 VRV----ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
V C S F D + + M G L L + +
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----------FSEADM 293
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPTV 405
A ++ L+++H +++ DLKP+NILLD I D GL+ F + + +V
Sbjct: 294 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 350
Query: 406 SSSIGVRGTIGYVAPE-YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
GT GY+APE G ++ D +S G +L +++ P
Sbjct: 351 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR-QGASKSFMAECKALKNIRHKNLV 291
F +G G+F V G + A+K I + +G S E L+ I+H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
+ ++ + +V + + G L D I ++ E TL+++
Sbjct: 84 ALEDI-----YESPNHLYLVMQLVSGGEL-----FDRIVEKGFYTEKDASTLIRQ----- 128
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
V A+ YLH+ I+H DLKP N+L D + I DFGLS+ +S++
Sbjct: 129 -VLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTA 182
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
G T GYVAPE S D +S G++
Sbjct: 183 CG---TPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 28/225 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
+ FS +IG G FG VY + G + A+K ++ +R K E AL +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNERIMLSL 245
Query: 291 VRV----ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
V C S F D + + M G L L + +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----------FSEADM 294
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
A ++ L+++H +++ DLKP+NILLD I D GL+ + S
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPH 348
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+S+ GT GY+APE G ++ D +S G +L +++ P
Sbjct: 349 ASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 28/225 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
+ FS +IG G FG VY + G + A+K ++ +R K E AL +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNERIMLSL 245
Query: 291 VRV----ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
V C S F D + + M G L L + +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----------FSEADM 294
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
A ++ L+++H +++ DLKP+NILLD I D GL+ + S
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPH 348
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+S+ GT GY+APE G ++ D +S G +L +++ P
Sbjct: 349 ASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 96 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFXEPHAR 139
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 140 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 189
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 122 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFXEPHAR 165
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 166 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 215
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFXEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKNLVRVITS 296
+G G+F V + V G A K+IN ++ A + E + + ++H N+VR+ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 297 CSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
S +G+ + +++ + G L + I R+ E +Q+I A+
Sbjct: 90 ISE---EGHHY--LIFDLVTGGELF-----EDIVAREYYSEADASHCIQQILEAV----- 134
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDL---SAHIGDFGLSRFYQAVSNPTVSSSIGVRG 413
LH H Q ++H DLKP N+LL + L + + DFGL+ + + G G
Sbjct: 135 ---LHCH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ----AWFGFAG 186
Query: 414 TIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
T GY++PE D+++ G++L ++ P
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG---ASKSFMAECKALKNIRH 287
+ + IG GS+G V+K + G +VAIK L+ + K + E + LK ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKH 61
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
NLV ++ F+ +V++Y + L H QR + K
Sbjct: 62 PNLVNLLEV-----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK------- 105
Query: 348 SIAIDVASALDYLHQH-CQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
SI A+++ H+H C +H D+KP NIL+ + DFG +R S+
Sbjct: 106 SITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-YYD 160
Query: 407 SSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVT 446
+ R Y +PE +G ++ DV++ G + E+++
Sbjct: 161 DEVATR---WYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 58/245 (23%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL---------QRQGASKSFMAECKA 281
+ + ++G G V + + A+K+I++ + Q ++ + E
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 282 LKNIR-HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
L+ + H N++++ + ++ N F +V+ M G L +L +K
Sbjct: 77 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-------------TEK 118
Query: 341 LTLLQR-----ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
+TL ++ + ++V AL L+ I+H DLKP NILLD+D++ + DFG S
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS- 171
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEY----------GLGSEVSTNGDVYSYGILLLEMV 445
Q + S V GT Y+APE G G EV D++S G+++ ++
Sbjct: 172 -CQLDPGEKLRS---VCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLL 223
Query: 446 TTKKP 450
P
Sbjct: 224 AGSPP 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRH 287
TD + +G G+F V + + G A K+IN ++ A + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N+VR+ S S F +V+ + G L + I R+ E +Q+I
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELF-----EDIVAREYYSEADASHCIQQI 112
Query: 348 SIAIDVASALDYLHQHCQ-EPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSNP 403
+++ HC I+H DLKP N+LL + + + DFGL+ Q
Sbjct: 113 LESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ- 161
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ G GT GY++PE D+++ G++L ++ P
Sbjct: 162 ---AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRH 287
TD + +G G+F V + + G A K+IN ++ A + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
N+VR+ S S F +V+ + G L + I R+ E +Q+I
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELF-----EDIVAREYYSEADASHCIQQI 112
Query: 348 SIAIDVASALDYLHQHCQ-EPILHCDLKPSNILLDND---LSAHIGDFGLSRFYQAVSNP 403
+++ HC I+H DLKP N+LL + + + DFGL+ Q
Sbjct: 113 LESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ- 161
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
+ G GT GY++PE D+++ G++L
Sbjct: 162 ---AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALK 283
+KA D + +IG G+FG V V A+K+++ + ++ S F E +
Sbjct: 71 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
+V++ + FQ + + +V +YMP G L + +P++
Sbjct: 130 FANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----------- 173
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
R A +V ALD +H +H D+KP N+LLD + DFG
Sbjct: 174 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 404 TVSSSIGVRGTIGYVAPEY----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+++ GT Y++PE G D +S G+ L EM+ P
Sbjct: 230 RCDTAV---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALK 283
+KA D + +IG G+FG V V A+K+++ + ++ S F E +
Sbjct: 66 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
+V++ + FQ + + +V +YMP G L + +P++
Sbjct: 125 FANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----------- 168
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
R A +V ALD +H +H D+KP N+LLD + DFG
Sbjct: 169 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 404 TVSSSIGVRGTIGYVAPEY----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+++ GT Y++PE G D +S G+ L EM+ P
Sbjct: 225 RCDTAV---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F +IG GS+ V + + A+KV+ + + E + +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+ + SC FQ V +Y+ G L + QR R++ +
Sbjct: 67 FLVGLHSC----FQTESRLFFVIEYVNGGDLMFHM------QRQRKLPEEHARFY----- 111
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ +++ AL+YLH+ I++ DLK N+LLD++ + D+G+ + + + +S
Sbjct: 112 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 166
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G + + D ++ G+L+ EM+ + P D
Sbjct: 167 C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE L + D ++ G+L+ +M P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 201 KRSRPSRQPSEPMIRKALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVA 260
++ + S P + KA + + ++ D +G G++G V K G ++A
Sbjct: 21 EQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMA 80
Query: 261 IKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKA----IVYKYMP 316
+K I A+ + + + L ++ +R + +V F G F+ I + M
Sbjct: 81 VKRIR-----ATVNSQEQKRLLMDLDIS--MRTVDCPFTVTFYGALFREGDVWICMELM- 132
Query: 317 NGSLEKWLHPDAIPQRDREIEIQKLTLLQRI--SIAIDVASALDYLHQHCQEPILHCDLK 374
+ SL+K+ +++ + T+ + I IA+ + AL++LH ++H D+K
Sbjct: 133 DTSLDKFY---------KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVK 181
Query: 375 PSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-- 432
PSN+L++ + DFG+S + T+ + G Y+APE + E++ G
Sbjct: 182 PSNVLINALGQVKMCDFGISGYLVDSVAKTIDA-----GCKPYMAPER-INPELNQKGYS 235
Query: 433 ---DVYSYGILLLEMVTTKKPTD 452
D++S GI ++E+ + P D
Sbjct: 236 VKSDIWSLGITMIELAILRFPYD 258
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN---LQRQGASKSFMAECKALK 283
+KA D + +IG G+FG V V A+K+++ + ++ S F E +
Sbjct: 71 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 284 NIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTL 343
+V++ + FQ + + +V +YMP G L + +P++
Sbjct: 130 FANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----------- 173
Query: 344 LQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNP 403
R A +V ALD +H +H D+KP N+LLD + DFG
Sbjct: 174 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 404 TVSSSIGVRGTIGYVAPEY----GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+++ GT Y++PE G D +S G+ L EM+ P
Sbjct: 230 RCDTAV---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 36/223 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALKNIRHK 288
+ +IG GSFG V K + VA+K++ RQ A E + L+++R +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-----EIRILEHLRKQ 153
Query: 289 ---NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
N + VI + F+ + M L K + + Q +L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK------------KNKFQGFSLPL 201
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNP 403
A + LD LH++ I+HCDLKP NILL + I DFG S +
Sbjct: 202 VRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ S Y APE LG+ D++S G +L E++T
Sbjct: 259 XIQSRF-------YRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 36/223 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALKNIRHK 288
+ +IG GSFG V K + VA+K++ RQ A E + L+++R +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-----EIRILEHLRKQ 153
Query: 289 ---NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
N + VI + F+ + M L K + + Q +L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK------------KNKFQGFSLPL 201
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNP 403
A + LD LH++ I+HCDLKP NILL + I DFG S +
Sbjct: 202 VRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ S Y APE LG+ D++S G +L E++T
Sbjct: 259 XIQSRF-------YRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ D + VA+K++ + + M+E K L + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT--------- 342
++ +C+ G ++ +Y G L +L +R R+ I T
Sbjct: 114 NLLGACT---IGGPTL--VITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 162
Query: 343 ----LLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L +S + VA + +L ++C +H DL NILL + I DFGL+R
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHI 218
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGI L E+ +
Sbjct: 219 KNDSNYVVKGN--ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ +++ AL+YLH+ I++ DLK N+LLD++ + D+G+ + + + +S+
Sbjct: 159 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTF 213
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G + + D ++ G+L+ EM+ + P D
Sbjct: 214 C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F +IG GS+ V + + A+KV+ + + E + +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+ + SC FQ V +Y+ G L + QR R++ +
Sbjct: 71 FLVGLHSC----FQTESRLFFVIEYVNGGDLMFHM------QRQRKLPEEHARFY----- 115
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ +++ AL+YLH+ I++ DLK N+LLD++ + D+G+ + + + +S
Sbjct: 116 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 170
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G + + D ++ G+L+ EM+ + P D
Sbjct: 171 C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRHKN 289
F +IG GS+ V + + A+KV+ + + E + +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+ + SC FQ V +Y+ G L + QR R++ +
Sbjct: 82 FLVGLHSC----FQTESRLFFVIEYVNGGDLMFHM------QRQRKLPEEHARFY----- 126
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ +++ AL+YLH+ I++ DLK N+LLD++ + D+G+ + + + +S
Sbjct: 127 SAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXF 181
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
GT Y+APE G + + D ++ G+L+ EM+ + P D
Sbjct: 182 C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ D + VA+K++ + + M+E K L + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT--------- 342
++ +C+ G ++ +Y G L +L +R R+ I T
Sbjct: 91 NLLGACT---IGGPTL--VITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 139
Query: 343 ----LLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L +S + VA + +L ++C +H DL NILL + I DFGL+R
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGI L E+ +
Sbjct: 196 KNDSNYVVKGN--ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+++D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+APE + + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G G V+ V ++ VAIK I L + K + E K ++ + H N+V+V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPD---AIPQRDREIEIQKLTLLQRISIAIDVAS 355
Q D + + +++++ D + Q E +L + Q +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQ-------LLR 131
Query: 356 ALDYLHQHCQEPILHCDLKPSNILLDN-DLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
L Y+H +LH DLKP+N+ ++ DL IGDFGL+R + S G+ T
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-T 187
Query: 415 IGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
Y +P L T D+++ G + EM+T K
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ D + VA+K++ + + M+E K L + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT--------- 342
++ +C+ G ++ +Y G L +L +R R+ I T
Sbjct: 107 NLLGACT---IGGPTL--VITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 155
Query: 343 ----LLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L +S + VA + +L ++C +H DL NILL + I DFGL+R
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDI 211
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGI L E+ +
Sbjct: 212 KNDSNYVVKGN--ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL---------QRQGASKSFMAECKA 281
+ + ++G G V + + A+K+I++ + Q ++ + E
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 282 LKNIR-HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
L+ + H N++++ + ++ N F +V+ M G L +L +K
Sbjct: 77 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-------------TEK 118
Query: 341 LTLLQR-----ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
+TL ++ + ++V AL L+ I+H DLKP NILLD+D++ + DFG S
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS- 171
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEY----------GLGSEVSTNGDVYSYGILLLEMV 445
+P V GT Y+APE G G EV D++S G+++ ++
Sbjct: 172 ---CQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLL 223
Query: 446 TTKKP 450
P
Sbjct: 224 AGSPP 228
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ D + VA+K++ + + M+E K L + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT--------- 342
++ +C+ G ++ +Y G L +L +R R+ I T
Sbjct: 114 NLLGACT---IGGPTL--VITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 162
Query: 343 ----LLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L +S + VA + +L ++C +H DL NILL + I DFGL+R
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDI 218
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGI L E+ +
Sbjct: 219 KNDSNYVVKGN--ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 239 IGVGSFGSVYK----GVFDEDGTV-VAIKVINLQRQGASK-SFMAECKALKNI-RHKNLV 291
+G G+FG V + G+ D + VA+K++ + + M+E K L + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLT--------- 342
++ +C+ G ++ +Y G L +L +R R+ I T
Sbjct: 109 NLLGACT---IGGPTL--VITEYCCYGDLLNFL------RRKRDSFICSKTSPAIMEDDE 157
Query: 343 ----LLQRISIAIDVASALDYL-HQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
L +S + VA + +L ++C +H DL NILL + I DFGL+R
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDI 213
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ SN V + R + ++APE + DV+SYGI L E+ +
Sbjct: 214 KNDSNYVVKGN--ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINL---------QRQGASKSFMAECKA 281
+ + ++G G V + + A+K+I++ + Q ++ + E
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 282 LKNIR-HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
L+ + H N++++ + ++ N F +V+ M G L +L +K
Sbjct: 64 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-------------TEK 105
Query: 341 LTLLQR-----ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR 395
+TL ++ + ++V AL L+ I+H DLKP NILLD+D++ + DFG S
Sbjct: 106 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS- 158
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEY----------GLGSEVSTNGDVYSYGILLLEMV 445
+P V GT Y+APE G G EV D++S G+++ ++
Sbjct: 159 ---CQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLL 210
Query: 446 TTKKP 450
P
Sbjct: 211 AGSPP 215
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT Y+AP L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + +G G++GSV VA+K ++ Q ++ E +
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAI-VYKYMPNGSLEKWLHPDAIPQRDREIE 337
LK+++H+N L+ V T +S++ DF + + + L + A+ D ++
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQALS--DEHVQ 126
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
LL+ L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 127 FLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-- 171
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
QA T G T Y APE L + D++S G ++ E++ K
Sbjct: 172 QADEEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 39/247 (15%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKALKN 284
+K D + +LIG GS+G VY VAIK +N + K + E L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
++ ++R+ D D IV + + + L+K LT
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIF-----------LTEQ 131
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
+I ++ ++H+ I+H DLKP+N LL+ D S I DFGL+R + +
Sbjct: 132 HVKTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 405 VSSSIGVRG---------------------TIGYVAPEYGLGSEVSTNG-DVYSYGILLL 442
+ + + + T Y APE L E TN D++S G +
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 443 EMVTTKK 449
E++ K
Sbjct: 249 ELLNMMK 255
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQG--ASKSFMAECKA 281
K++ + +G G++GSV VA+K ++ Q ++ E +
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAI-VYKYMPNGSLEKWLHPDAIPQRDREIE 337
LK+++H+N L+ V T +S++ DF + + + L + A+ D ++
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIE----DFSEVYLVTTLMGADLNNIVKSQALS--DEHVQ 134
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
LL+ L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 135 FLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-- 179
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
QA T G T Y APE L + D++S G ++ E++ K
Sbjct: 180 QADEEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN----LQRQGASKSFMAECKALKNIRHK 288
+ +IG G FG V K + VA+K++ RQ A E + L+++R +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-----EIRILEHLRKQ 153
Query: 289 ---NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
N + VI + F+ + M L K + + Q +L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK------------KNKFQGFSLPL 201
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNP 403
A + LD LH++ I+HCDLKP NILL + I DFG S +
Sbjct: 202 VRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYX 258
Query: 404 TVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ S Y APE LG+ D++S G +L E++T
Sbjct: 259 XIQSRF-------YRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI--RHKNLVRVITS 296
IG G +G V+ G + G VA+KV + S+ E + + + RH+N++ I
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFI-- 97
Query: 297 CSSVDFQGNDFKAIVY---KYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
+ D +G +Y Y NGSL +L + + + +A
Sbjct: 98 --AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM------------LKLAYSS 143
Query: 354 ASALDYLHQHC-----QEPILHCDLKPSNILLDNDLSAHIGDFGLS-RFYQAVSNPTVSS 407
S L +LH + I H DLK NIL+ + + I D GL+ +F + +
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEM 444
+ V GT Y+ PE L ++ N D+YS+G++L E+
Sbjct: 204 NTRV-GTKRYMPPEV-LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 225 SLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ--RQGASKS---FMAEC 279
SLL+ + IG GS+G V + ++ + AIK++N RQ K E
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHP-----------DA 328
+ +K + H N+ R+ ++ + +V + G L L+ D
Sbjct: 80 RLMKKLHHPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 329 I-------PQRDREIE-------IQKLTLLQR----ISIAIDVASALDYLHQHCQEPILH 370
+ P+ + E + L +QR +I + SAL YLH + I H
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICH 191
Query: 371 CDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEV 428
D+KP N L + S I DFGLS+ + ++N GT +VAPE L +
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV-LNTTN 250
Query: 429 STNG---DVYSYGILL 441
+ G D +S G+LL
Sbjct: 251 ESYGPKCDAWSAGVLL 266
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVIN--LQRQGASKSFMAECKA 281
K++ + +G G++GSV VA+K ++ Q ++ E +
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 282 LKNIRHKN---LVRVITSCSSVDFQGNDFKAI-VYKYMPNGSLEKWLHPDAIPQRDREIE 337
LK+++H+N L+ V T +S++ DF + + + L + A+ D ++
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQALS--DEHVQ 134
Query: 338 IQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFY 397
LL+ L Y+H I+H DLKPSN+ ++ D I DFGL+R
Sbjct: 135 FLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-- 179
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMVTTK 448
QA T G T Y APE L + D++S G ++ E++ K
Sbjct: 180 QADEEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSF---MAECKALKNIRH 287
D F +G GSFG V E G A+K+++ Q+ K + E + L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 288 KNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRI 347
LV++ S F+ N +V +Y+ G + L I + +
Sbjct: 101 PFLVKLEFS-----FKDNSNLYMVMEYVAGGEMFSHLR-----------RIGRFSEPHAR 144
Query: 348 SIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSS 407
A + +YLH +++ DLKP N+L+D + DFG ++ +
Sbjct: 145 FYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-------R 194
Query: 408 SIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT +APE L + D ++ G+L+ EM P
Sbjct: 195 TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 232 GFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLV 291
+++ +IG GSFG V++ E V KV+ +R E + ++ ++H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-----ELQIMRIVKHPNVV 95
Query: 292 RVIT-SCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+ S+ D + F +V +Y+P H + Q + I KL + Q
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI-KLYMYQ----- 149
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSI 409
+ +L Y+H I H D+KP N+LLD + DFG ++ A P V S I
Sbjct: 150 --LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-GEPNV-SXI 202
Query: 410 GVRGTIGYVAPEYGLG-SEVSTNGDVYSYGILLLEMV 445
R Y APE G + +TN D++S G ++ E++
Sbjct: 203 CSR---YYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-R 286
K D + +LIG GSFG V K + VAIK+I ++ +++ E + L+ + +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNK 109
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H ++ F + +V++ M + +L L R + ++L
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL---------RNTNFRGVSLNLT 159
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDN--DLSAHIGDFGLS-----RFYQA 399
A + +AL +L + I+HCDLKP NILL N + I DFG S R YQ
Sbjct: 160 RKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX 218
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + Y +PE LG D++S G +L+EM T
Sbjct: 219 IQSRF------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 221 MSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAE 278
M+ + + T+ + +G G+F V + V G A +IN ++ A + E
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60
Query: 279 CKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEI 338
+ + ++H N+VR+ S S +G+ + +++ + G L + I R+ E
Sbjct: 61 ARICRLLKHPNIVRLHDSISE---EGHHY--LIFDLVTGGELF-----EDIVAREYYSEA 110
Query: 339 QKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDL---SAHIGDFGLSR 395
+Q+I A+ LH H Q ++H +LKP N+LL + L + + DFGL+
Sbjct: 111 DASHCIQQILEAV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
Query: 396 FYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + G GT GY++PE D+++ G++L ++ P
Sbjct: 162 EVEGEQQ----AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 334 REIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL------DNDLSAH 387
++ E + + L+ I+ + LDY+H+ C I+H D+KP N+L+ +N +
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIK 178
Query: 388 IGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I D G + +Y + ++SI R Y +PE LG+ D++S L+ E++T
Sbjct: 179 IADLGNACWY----DEHYTNSIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-R 286
K D + +LIG GSFG V K + VAIK+I ++ +++ E + L+ + +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNK 109
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H ++ F + +V++ M + +L L R + ++L
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL---------RNTNFRGVSLNLT 159
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLS-----RFYQA 399
A + +AL +L + I+HCDLKP NILL N + I DFG S R YQ
Sbjct: 160 RKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 218
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + Y +PE LG D++S G +L+EM T
Sbjct: 219 IQSRF------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 334 REIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL------DNDLSAH 387
++ E + + L+ I+ + LDY+H+ C I+H D+KP N+L+ +N +
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIK 178
Query: 388 IGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
I D G + +Y + ++SI R Y +PE LG+ D++S L+ E++T
Sbjct: 179 IADLGNACWY----DEHYTNSIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-R 286
K D + +LIG GSFG V K + VAIK+I ++ +++ E + L+ + +
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNK 90
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
H ++ F + +V++ M + +L L R + ++L
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL---------RNTNFRGVSLNLT 140
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLS-----RFYQA 399
A + +AL +L + I+HCDLKP NILL N + I DFG S R YQ
Sbjct: 141 RKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 199
Query: 400 VSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+ + Y +PE LG D++S G +L+EM T
Sbjct: 200 IQSRF------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHT 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLV---RVIT 295
+G G++G VYK + + ++ G S S E L+ ++H N++ +V
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 296 SCSS------VDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
S + D+ +D I+ + + + +K P +P+ +++ S+
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKK---PVQLPR----------GMVK--SL 133
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILLDND----LSAHIGDFGLSRFYQAVSNPTV 405
+ + YLH + +LH DLKP+NIL+ + I D G +R + + P +
Sbjct: 134 LYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-L 189
Query: 406 SSSIGVRGTIGYVAPEYGLGSEVSTNG-DVYSYGILLLEMVTTK 448
+ V T Y APE LG+ T D+++ G + E++T++
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 22/213 (10%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVR 292
F + +G GS+G V+K EDG + A+K +G + L + V
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD----RARKLAEVGSHEKVG 114
Query: 293 VITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
C ++ Q + I+Y L+ L ++ Q+ E L Q D
Sbjct: 115 QHPCCVRLE-QAWEEGGILY-------LQTELCGPSL-QQHCEAWGASLPEAQVWGYLRD 165
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR 412
AL +LH + ++H D+KP+NI L +GDFGL V T +
Sbjct: 166 TLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL-----LVELGTAGAGEVQE 217
Query: 413 GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMV 445
G Y+APE GS T DV+S G+ +LE+
Sbjct: 218 GDPRYMAPELLQGS-YGTAADVFSLGLTILEVA 249
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 235 STNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR-HKNLVRV 293
++ L+G G++ V V ++G A+K+I Q + E + L + +KN++ +
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 294 ITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDV 353
I F+ + +V++ + GS+ A Q+ + ++ + + R DV
Sbjct: 77 IEF-----FEDDTRFYLVFEKLQGGSIL------AHIQKQKHFNEREASRVVR-----DV 120
Query: 354 ASALDYLHQHCQEPILHCDLKPSNILLDNDLS---AHIGDFGLSRFYQ------AVSNPT 404
A+ALD+LH + I H DLKP NIL ++ I DF L + ++ P
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNG--------DVYSYGILLLEMVTTKKP 450
+++ G+ Y+APE EV T+ D++S G++L M++ P
Sbjct: 178 LTTPC---GSAEYMAPEV---VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
LTL I + VA +++L +H DL NILL I DFGL+R
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIY 244
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P R + ++APE + DV+S+G+LL E+ +
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
LTL I + VA +++L +H DL NILL I DFGL+R
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIY 242
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P R + ++APE + DV+S+G+LL E+ +
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 217 ALLKMSYKSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFM 276
++++ +++ ++ TDG+ IGVGS+ + + A+K+I+ ++ ++
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE 67
Query: 277 AECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGS-LEKWLHPDAIPQRDRE 335
L+ +H N++ + + + +V + G L+K L +R+
Sbjct: 68 I---LLRYGQHPNIITLKDV-----YDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS 119
Query: 336 IEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDF 391
++ + ++YLH + ++H DLKPSNIL N S I DF
Sbjct: 120 ------------AVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 392 GLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G ++ +A + + T +VAPE D++S G+LL +T P
Sbjct: 165 GFAKQLRAENGLLXTPCY----TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
LTL I + VA +++L +H DL NILL I DFGL+R
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIY 249
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P R + ++APE + DV+S+G+LL E+ +
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNPTVSSSI 409
V S + YLH+H I+H DLKP N+LL++ D I DFGLS ++ + + +
Sbjct: 145 VLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERL 199
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLL 442
GT Y+APE L + DV+S G++L
Sbjct: 200 ---GTAYYIAPEV-LRKKYDEKCDVWSIGVILF 228
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVY----KGVFDEDGTVVAIKVINLQRQGASKSFMAEC 279
+ +K TD F+ ++G GSFG V KG DE V +K + + + M E
Sbjct: 14 RDRMKLTD-FNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDDVECTMVEK 71
Query: 280 KALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ 339
+ L + + SC FQ D V +Y+ G L + ++
Sbjct: 72 RVLALPGKPPFLTQLHSC----FQTMDRLYFVMEYVNGGDLMYHIQ-----------QVG 116
Query: 340 KLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR--FY 397
+ + A ++A L +L + I++ DLK N++LD++ I DFG+ + +
Sbjct: 117 RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173
Query: 398 QAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V+ GT Y+APE + D +++G+LL EM+ + P
Sbjct: 174 DGVTTKXFC------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 32/226 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKN 289
+DG+ IGVGS+ + V A+KVI+ ++ S+ L+ +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGS-LEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
++ + + +V + M G L+K L +R+ +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------- 129
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDFGLSRFYQAVSNPT 404
+ ++YLH + ++H DLKPSNIL N I DFG ++ +A +
Sbjct: 130 ----IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ T +VAPE D++S GILL M+ P
Sbjct: 183 MTPCY----TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 36/263 (13%)
Query: 198 SWHKRSRPSRQPSEPMIRKALLKMSYKSLLKATD-------GFSSTNL-IGVGSFGSVYK 249
+W R SR+PS + ++ K LK D +++ L +G GSFG V++
Sbjct: 54 TWAARGSRSREPSPKTEDNEGVLLTEK--LKPVDYEYREEVHWATHQLRLGRGSFGEVHR 111
Query: 250 GVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKA 309
+ G A+K + L+ A + MA C L + R L + V+
Sbjct: 112 MEDKQTGFQCAVKKVRLEVFRAEE-LMA-CAGLTSPRIVPLYGAVREGPWVN-------- 161
Query: 310 IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPIL 369
I + + GSL + + DR L + A++ L+YLH IL
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDR--------ALYYLGQALE---GLEYLHS---RRIL 207
Query: 370 HCDLKPSNILLDNDLS-AHIGDFGLSRFYQAVS-NPTVSSSIGVRGTIGYVAPEYGLGSE 427
H D+K N+LL +D S A + DFG + Q ++ + + GT ++APE LG
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 428 VSTNGDVYSYGILLLEMVTTKKP 450
DV+S ++L M+ P
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAV 400
LTL I + VA +++L +H DL NILL I DFGL+R
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIY 251
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
+P R + ++APE + DV+S+G+LL E+ +
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 30/232 (12%)
Query: 224 KSLLKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQ---RQGASKSFMAECK 280
+ +K TD F+ ++G GSFG V + A+K++ + + M E +
Sbjct: 335 RDRMKLTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 281 ALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
L + + SC FQ D V +Y+ G L + ++ +
Sbjct: 394 VLALPGKPPFLTQLHSC----FQTMDRLYFVMEYVNGGDLMYHIQ-----------QVGR 438
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR--FYQ 398
+ A ++A L +L + I++ DLK N++LD++ I DFG+ + +
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
V+ GT Y+APE + D +++G+LL EM+ + P
Sbjct: 496 GVTTKXFC------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 32/226 (14%)
Query: 230 TDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKN 289
+DG+ IGVGS+ + V A+KVI+ ++ S+ L+ +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 290 LVRVITSCSSVDFQGNDFKAIVYKYMPNGS-LEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
++ + + +V + M G L+K L +R+ +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------- 129
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDFGLSRFYQAVSNPT 404
+ ++YLH + ++H DLKPSNIL N I DFG ++ +A +
Sbjct: 130 ----IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++ T +VAPE D++S GILL M+ P
Sbjct: 183 MTPCY----TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 239 IGVGSFGSVYKGVFDEDG-------TVVAIKVINLQRQGASKSFMAECKALKNIRHKNLV 291
+G G+F ++KGV E G T V +KV++ + S+SF + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
C D +V +++ GSL+ +L + + +L ++ +A
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNK----------NCINILWKLEVAK 120
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+A+A+ +L ++ ++H ++ NILL + G+ + + TV +
Sbjct: 121 QLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 412 RGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVT 446
+ I +V PE + ++ D +S+G L E+ +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
IA+ + AL++LH ++H D+KPSN+L++ + DFG+S + V+
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD----DVAKD 167
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLLEMVTTKKPTD 452
I G Y+APE + E++ G D++S GI ++E+ + P D
Sbjct: 168 IDA-GCKPYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 239 IGVGSFGSVYKGVFDEDG-------TVVAIKVINLQRQGASKSFMAECKALKNIRHKNLV 291
+G G+F ++KGV E G T V +KV++ + S+SF + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
C F G D +V +++ GSL+ +L + + +L ++ +A
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNK----------NCINILWKLEVAK 120
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGV 411
+A A+ +L ++ ++H ++ NILL + G+ + + TV +
Sbjct: 121 QLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 412 RGTIGYVAPEYGLGSE-VSTNGDVYSYGILLLEMVT 446
+ I +V PE + ++ D +S+G L E+ +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 36/263 (13%)
Query: 198 SWHKRSRPSRQPSEPMIRKALLKMSYKSLLKATD-------GFSSTNL-IGVGSFGSVYK 249
+W R SR+PS + ++ K LK D +++ L +G GSFG V++
Sbjct: 35 TWAARGSRSREPSPKTEDNEGVLLTEK--LKPVDYEYREEVHWATHQLRLGRGSFGEVHR 92
Query: 250 GVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKA 309
+ G A+K + L+ A + MA C L + R L + V+
Sbjct: 93 MEDKQTGFQCAVKKVRLEVFRAEE-LMA-CAGLTSPRIVPLYGAVREGPWVN-------- 142
Query: 310 IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPIL 369
I + + GSL + + DR L + A++ L+YLH IL
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDR--------ALYYLGQALE---GLEYLHS---RRIL 188
Query: 370 HCDLKPSNILLDNDLS-AHIGDFGLSRFYQAVS-NPTVSSSIGVRGTIGYVAPEYGLGSE 427
H D+K N+LL +D S A + DFG + Q + + + GT ++APE LG
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 428 VSTNGDVYSYGILLLEMVTTKKP 450
DV+S ++L M+ P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGA--SKSFMAECKALKNIRHK 288
D + +LIG GS+G VY VAIK +N + K + E L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 289 NLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRIS 348
++R+ D D IV + + + L+K LT +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIF-----------LTEEHIKT 133
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
I ++ +++H+ I+H DLKP+N LL+ D S + DFGL+R + + + +
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 409 IGVRGTIG------------------YVAPEYGLGSEVSTNG-DVYSYGILLLEMV 445
+ G Y APE L E T D++S G + E++
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 134
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVSNPTVSSSIGVRGTIGYVA 419
++ ++H DLK N+ L+ DL IGDFGL+ Y T+ GT Y+A
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIA 185
Query: 420 PEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
PE S DV+S G ++ ++ K P
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 90 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 138
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVSNPTVSSSIGVRGTIGYVA 419
++ ++H DLK N+ L+ DL IGDFGL+ Y T+ GT Y+A
Sbjct: 139 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIA 189
Query: 420 PEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
PE S DV+S G ++ ++ K P
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 134
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVSNPTVSSSIGVRGTIGYVA 419
++ ++H DLK N+ L+ DL IGDFGL+ Y T+ GT Y+A
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIA 185
Query: 420 PEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
PE S DV+S G ++ ++ K P
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG G FG +Y A V+ ++ Q F +E K + + K+ ++
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF-SELKFYQRVAKKDCIKKWIERK 103
Query: 299 SVDFQG---------NDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+D+ G +FK Y++M +E+ L D + +K T+LQ +
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFM---VMER-LGIDLQKISGQNGTFKKSTVLQ---L 156
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILL--DNDLSAHIGDFGLSRFY-------QAV 400
I + L+Y+H++ +H D+K +N+LL N ++ D+GLS Y Q
Sbjct: 157 GIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQ 213
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKPTD 452
NP G GTI + + + G +S DV G +L + K P +
Sbjct: 214 ENPRK----GHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE 261
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 41/228 (17%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D + +G G + V++ + + V +K++ ++ K E K L+N+R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLR--GG 91
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+IT V + A+V++++ N ++ Q LT
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------------QTLTDYDIRFYM 137
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSI 409
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY
Sbjct: 138 YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP------GQEY 188
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSY-------GILLLEMVTTKKP 450
VR VA Y G E+ + +Y Y G +L M+ K+P
Sbjct: 189 NVR-----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR-HKNLVRVITSC 297
+G GSF K V + A+K+I+ + + ++ E ALK H N+V++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEV- 74
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
F +V + + G L + I ++ E + +++++ SA+
Sbjct: 75 ----FHDQLHTFLVMELLNGGEL-----FERIKKKKHFSETEASYIMRKL------VSAV 119
Query: 358 DYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGT 414
++H ++H DLKP N+L +++L I DFG +R + P + T
Sbjct: 120 SHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF----T 172
Query: 415 IGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ Y APE + + D++S G++L M++ + P
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 117 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 157
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 158 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 213
Query: 407 SSIGVRGTIGYVAPEYGLG-SEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 214 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 70 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 110
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 111 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 166
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 167 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 73 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 113
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 114 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 169
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 170 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 89 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 129
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 130 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 185
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 186 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-- 285
+ T F IG G FGSV+K V DG + AIK G+ + E AL+ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 63
Query: 286 -----RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+H ++VR ++ + +D I +Y GSL DAI + R + K
Sbjct: 64 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSL-----ADAISENYRIMSYFK 113
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL 380
L+ + + V L Y+H ++H D+KPSNI +
Sbjct: 114 EAELK--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-- 285
+ T F IG G FGSV+K V DG + AIK G+ + E AL+ +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 59
Query: 286 -----RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+H ++VR ++ + +D I +Y GSL DAI + R + K
Sbjct: 60 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSL-----ADAISENYRIMSYFK 109
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL 380
L+ + + V L Y+H ++H D+KPSNI +
Sbjct: 110 EAELK--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGSLE--KWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+++ WL ++ + I+ +R
Sbjct: 117 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 157
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 158 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 213
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 214 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-- 285
+ T F IG G FGSV+K V DG + AIK G+ + E AL+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 61
Query: 286 -----RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+H ++VR ++ + +D I +Y GSL DAI + R + K
Sbjct: 62 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSL-----ADAISENYRIMSYFK 111
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL 380
L+ + + V L Y+H ++H D+KPSNI +
Sbjct: 112 EAELK--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 69 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 109
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 110 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 165
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 166 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 228 KATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-- 285
+ T F IG G FGSV+K V DG + AIK G+ + E AL+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 61
Query: 286 -----RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQK 340
+H ++VR ++ + +D I +Y GSL DAI + R + K
Sbjct: 62 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSL-----ADAISENYRIMSYFK 111
Query: 341 LTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL 380
L+ + + V L Y+H ++H D+KPSNI +
Sbjct: 112 EAELK--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 84 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 132
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-----GTIG 416
++ ++H DLK N+ L+ DL IGDFGL+ T G R GT
Sbjct: 133 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTPN 180
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y+APE S DV+S G ++ ++ K P
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDN---DLSAHIGDFGLSRFYQAVSNPTVSSSI 409
+ A+ YLH++ I+H DLKP N+L D I DFGLS+ V + + ++
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMKTV 210
Query: 410 GVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
GT GY APE G D++S GI+
Sbjct: 211 C--GTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 108 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 156
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-----GTIG 416
++ ++H DLK N+ L+ DL IGDFGL+ T G R GT
Sbjct: 157 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTPN 204
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y+APE S DV+S G ++ ++ K P
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ +DF +V + SL + LH +R + + + R +I + YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH-----KRRKAVTEPEARYFMRQTI-----QGVQYLH 159
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRF--YQAVSNPTVSSSIGVRGTIGYVA 419
+ ++H DLK N+ L++D+ IGDFGL+ + T+ GT Y+A
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC------GTPNYIA 210
Query: 420 PEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
PE S D++S G +L ++ K P
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 28/222 (12%)
Query: 237 NLIGVGSFGSVYKGVFDED-----GTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLV 291
+L+G GS+G V K V D + + K + + E + L+ +RHKN++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
++ VD N+ K +Y M D++P++ + + Q
Sbjct: 70 QL------VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-------RFPVCQAHGYFC 116
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSR-FYQAVSNPTVSSSIG 410
+ L+YLH + I+H D+KP N+LL + I G++ + ++ T +S
Sbjct: 117 QLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-- 171
Query: 411 VRGTIGYVAPEY--GLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+G+ + PE GL + D++S G+ L + T P
Sbjct: 172 -QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ NDF +V + SL + LH +R E + L++I + YLH
Sbjct: 110 FEDNDFVFVVLELCRRRSLLE-LHK----RRKALTEPEARYYLRQIVLGCQ------YLH 158
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVR-----GTIG 416
++ ++H DLK N+ L+ DL IGDFGL+ T G R GT
Sbjct: 159 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTPN 206
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y+APE S DV+S G ++ ++ K P
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ +DF +V + SL + LH +R + + + R +I + YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH-----KRRKAVTEPEARYFMRQTI-----QGVQYLH 159
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPE 421
+ ++H DLK N+ L++D+ IGDFGL+ + + GT Y+APE
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE----RKKDLCGTPNYIAPE 212
Query: 422 YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
S D++S G +L ++ K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ +DF +V + SL + LH +R + + + R +I + YLH
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE-LH-----KRRKAVTEPEARYFMRQTI-----QGVQYLH 143
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPE 421
+ ++H DLK N+ L++D+ IGDFGL+ + + GT Y+APE
Sbjct: 144 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE----RKKDLCGTPNYIAPE 196
Query: 422 YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
S D++S G +L ++ K P
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNI-RHKNLVRVITSC 297
+G G FG V++ V K + ++ G + + + ++ NI RH+N++ + S
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHES- 69
Query: 298 SSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASAL 357
F+ + ++++++ + + ++ A +REI +S V AL
Sbjct: 70 ----FESMEELVMIFEFISGLDIFERINTSAFELNEREI----------VSYVHQVCEAL 115
Query: 358 DYLHQHCQEPILHCDLKPSNILLDNDLSAHIG--DFGLSRFYQAVSNPTVSSSIGVRGTI 415
+LH H I H D++P NI+ S+ I +FG +R + N + +
Sbjct: 116 QFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP----- 167
Query: 416 GYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
Y APE VST D++S G L+ +++ P
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G G F V DG A+K I Q + E + H N++R++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC- 95
Query: 299 SVDFQGNDFKA-IVYKYMPNGSLEKWLHPDAIPQRDREI-EIQKLTLLQRISIAIDVASA 356
+ +G +A ++ + G+L W + + + + E Q L LL I ++ A
Sbjct: 96 -LRERGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFG--------LSRFYQAVSNPTVSSS 408
Y H+ DLKP+NILL ++ + D G + QA+ T+
Sbjct: 153 KGYAHR---------DLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL---TLQDW 200
Query: 409 IGVRGTIGYVAPE-YGLGSE--VSTNGDVYSYGILLLEMVTTKKPTD 452
R TI Y APE + + S + DV+S G +L M+ + P D
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 302 FQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLH 361
F+ +DF +V + SL + LH +R + + + R +I + YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH-----KRRKAVTEPEARYFMRQTI-----QGVQYLH 159
Query: 362 QHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPE 421
+ ++H DLK N+ L++D+ IGDFGL+ + + GT Y+APE
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE----RKKXLCGTPNYIAPE 212
Query: 422 YGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
S D++S G +L ++ K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 25/212 (11%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNL 290
D + +G G+FG V++ V G V K IN + E + + H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIA 350
+ + + F+ ++ +++ G L D I D K++ + I+
Sbjct: 111 INLHDA-----FEDKYEMVLILEFLSGGELF-----DRIAAED-----YKMSEAEVINYM 155
Query: 351 IDVASALDYLHQHCQEPILHCDLKPSNILLDNDL--SAHIGDFGLSRFYQAVSNPTVSSS 408
L ++H+H I+H D+KP NI+ + S I DFGL+ NP
Sbjct: 156 RQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA----TKLNPDEIVK 208
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNGDVYSYGIL 440
+ T + APE V D+++ G+L
Sbjct: 209 VTT-ATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 89 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 129
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q V
Sbjct: 130 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVK 185
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S GT+ Y+ PE S NG DV+S G +L M K P
Sbjct: 186 DS--QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHK-NLVRVITSC 297
+G G F V + + G A K + +R+G +C+A I H+ ++ + SC
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ------DCRA--EILHEIAVLELAKSC 88
Query: 298 SSV-----DFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAID 352
V ++ ++ +Y G + P+ + + E ++ I +
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDV--------IRLIKQ 139
Query: 353 VASALDYLHQHCQEPILHCDLKPSNILLDNDL---SAHIGDFGLSRFYQAVSNPTVSSSI 409
+ + YLHQ+ I+H DLKP NILL + I DFG+SR + +
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--------KIGHAC 188
Query: 410 GVR---GTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+R GT Y+APE ++T D+++ GI+ ++T P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 349 IAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSS 408
IA+ + AL++LH ++H D+KPSN+L++ DFG+S + V+
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD----DVAKD 194
Query: 409 IGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLLEMVTTKKPTD 452
I G Y APE + E++ G D++S GI +E+ + P D
Sbjct: 195 IDA-GCKPYXAPER-INPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 43/235 (18%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS--KSFMAECKALKNIRHKN- 289
+S IG G V++ V +E + AIK +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 290 -LVRVITSCSSVDFQGNDFKAIVYKYMPNGS--LEKWLHPDAIPQRDREIEIQKLTLLQR 346
++R+ D++ D +Y M G+ L WL ++ + I+ +R
Sbjct: 117 KIIRL------YDYEITD--QYIYMVMECGNIDLNSWL------KKKKSID-----PWER 157
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
S ++ A+ +HQH I+H DLKP+N L+ + + I DFG++ Q + V
Sbjct: 158 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVK 213
Query: 407 SSIGVRGTIGYVAPE-YGLGSEVSTNG----------DVYSYGILLLEMVTTKKP 450
S G + Y+ PE S NG DV+S G +L M K P
Sbjct: 214 DS--QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 310 IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPIL 369
+V++ M GS+ +H +R E++ ++Q DVASALD+LH + I
Sbjct: 88 LVFEKMRGGSILSHIH-----KRRHFNELEASVVVQ------DVASALDFLH---NKGIA 133
Query: 370 HCDLKPSNILLD--NDLS-AHIGDFGLSRFYQ------AVSNPTVSSSIGVRGTIGYVAP 420
H DLKP NIL + N +S I DFGL + +S P + + G+ Y+AP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC---GSAEYMAP 190
Query: 421 EY--GLGSEVS---TNGDVYSYGILLLEMVTTKKP 450
E E S D++S G++L +++ P
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G GSFG V++ + G A+K + L+ + + C L + R L +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPRIVPLYGAVREGP 123
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ I + + GSL + + DR L + A++ L+
Sbjct: 124 WVN--------IFMELLEGGSLGQLIKQMGCLPEDRA--------LYYLGQALE---GLE 164
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLS-AHIGDFGLSRFYQAVS-NPTVSSSIGVRGTIG 416
YLH ILH D+K N+LL +D S A + DFG + Q ++ + + GT
Sbjct: 165 YLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE +G D++S ++L M+ P
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 32/227 (14%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQR--------QGASKSFMAECKALKN 284
+S+ + +G G+FG V+ V E V +K I ++ E L
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
+ H N+++V+ F+ F +V + +G L+ + D P+ D +
Sbjct: 86 VEHANIIKVLDI-----FENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPL-------- 131
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPT 404
I + SA+ YL + I+H D+K NI++ D + + DFG + + +
Sbjct: 132 -ASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE-----R 182
Query: 405 VSSSIGVRGTIGYVAPEYGLGSEV-STNGDVYSYGILLLEMVTTKKP 450
GTI Y APE +G+ +++S G+ L +V + P
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 370 HCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVSSSIGVRGTIGYVAPEYGLGSEVS 429
H D+KP NIL+ D A++ DFG++ A ++ ++ GT+ Y APE S +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA---SATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 430 TNGDVYSYGILLLEMVTTKKP 450
D+Y+ +L E +T P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G GSFG V++ + G A+K + L+ + + C L + R L +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPRIVPLYGAVREGP 137
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ I + + GSL + + DR L + A++ L+
Sbjct: 138 WVN--------IFMELLEGGSLGQLIKQMGCLPEDRA--------LYYLGQALE---GLE 178
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLS-AHIGDFGLSRFYQAVS-NPTVSSSIGVRGTIG 416
YLH ILH D+K N+LL +D S A + DFG + Q ++ + + GT
Sbjct: 179 YLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE +G D++S ++L M+ P
Sbjct: 236 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
+G GSFG V++ + G A+K + L+ + + C L + R L +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPRIVPLYGAVREGP 139
Query: 299 SVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALD 358
V+ I + + GSL + + DR L + A++ L+
Sbjct: 140 WVN--------IFMELLEGGSLGQLIKQMGCLPEDRA--------LYYLGQALE---GLE 180
Query: 359 YLHQHCQEPILHCDLKPSNILLDNDLS-AHIGDFGLSRFYQAVS-NPTVSSSIGVRGTIG 416
YLH ILH D+K N+LL +D S A + DFG + Q ++ + + GT
Sbjct: 181 YLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 417 YVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
++APE +G D++S ++L M+ P
Sbjct: 238 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 239 IGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIRHKNLVRVITSCS 298
IG GSFG +Y G + VAIK+ N++ + + E K + +++ T
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYR------ILQGGTGIP 66
Query: 299 SVDFQG--NDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASA 356
+V + G D+ +V + SLE + +KL+L + +A + +
Sbjct: 67 NVRWFGVEGDYNVLVMDLL-GPSLEDLFN----------FCSRKLSLKTVLMLADQMINR 115
Query: 357 LDYLHQHCQEPILHCDLKPSNILLDNDLSA---HIGDFGLSRFYQAVSNPT---VSSSIG 410
++++H LH D+KP N L+ A +I DFGL++ Y+ S +
Sbjct: 116 VEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN 172
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSYGILLL 442
+ GT Y + LG E S D+ S G +L+
Sbjct: 173 LTGTARYASVNTHLGIEQSRRDDLESLGYVLM 204
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGAS-----KSFMAECKALKNI 285
D + +IG G+F V + + E G A+K++++ + +S + E +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 286 RHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQ 345
+H ++V ++ + SS + +V+++M L + + + D +
Sbjct: 84 KHPHIVELLETYSS-----DGMLYMVFEFMDGAD----LCFEIVKRADAGFVYSEAVASH 134
Query: 346 RISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSN 402
+ + AL Y H + I+H D+KP N+LL +N +GDFG++ Q +
Sbjct: 135 YMR---QILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGES 186
Query: 403 PTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVT 446
V+ G GT ++APE DV+ G++L +++
Sbjct: 187 GLVAG--GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 236 TNLIGVGSFGSVYKGVFDEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
++++G G+ +V++G + G + AIKV N+ M E + LK + HKN+V++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ K ++ ++ P GSL L P + + ++ R DV
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEE---PSNAYGLPESEFLIVLR-----DVV 122
Query: 355 SALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDFGLSR 395
+++L ++ I+H ++KP NI+ D + DFG +R
Sbjct: 123 GGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 236 TNLIGVGSFGSVYKGVFDEDGTVVAIKVI-NLQRQGASKSFMAECKALKNIRHKNLVRVI 294
++++G G+ +V++G + G + AIKV N+ M E + LK + HKN+V++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 295 TSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVA 354
+ K ++ ++ P GSL L P + + ++ R DV
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEE---PSNAYGLPESEFLIVLR-----DVV 122
Query: 355 SALDYLHQHCQEPILHCDLKPSNILL----DNDLSAHIGDFGLSR 395
+++L ++ I+H ++KP NI+ D + DFG +R
Sbjct: 123 GGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 34/173 (19%)
Query: 273 KSFMAECKALKNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQR 332
+ F+AE + H ++V++ D G+ IV +Y+ SL++
Sbjct: 130 RQFLAE------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---------- 173
Query: 333 DREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILLDNDLSAHIGDFG 392
+ QKL + + I+ +++ AL YLH +++ DLKP NI+L + I D G
Sbjct: 174 ---SKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLI-DLG 226
Query: 393 LSRFYQAVSNPTVSSSIGVRGTIGYVAPE-YGLGSEVSTNGDVYSYGILLLEM 444
AVS ++S + GT G+ APE G V+T D+Y+ G L +
Sbjct: 227 ------AVSR--INSFGYLYGTPGFQAPEIVRTGPTVAT--DIYTVGRTLAAL 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVV--AIKVINLQRQGASKSFMAECKALKNIRHKNL 290
++ N IG GS+G V V + GT + A K I F E + +K++ H N+
Sbjct: 28 YTLENTIGRGSWGEVKIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+R+ + F+ N +V + G L E+ +H + D I
Sbjct: 86 IRLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------------ARI 128
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNPTVS 406
DV SA+ Y H+ + H DLKP N L D + DFGL+ A P
Sbjct: 129 MKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA----ARFKPGKM 181
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
V GT YV+P+ L D +S G+++
Sbjct: 182 MRTKV-GTPYYVSPQV-LEGLYGPECDEWSAGVMM 214
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+L+D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVV--AIKVINLQRQGASKSFMAECKALKNIRHKNL 290
++ N IG GS+G V V + GT + A K I F E + +K++ H N+
Sbjct: 11 YTLENTIGRGSWGEVKIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 291 VRVITSCSSVDFQGNDFKAIVYKYMPNGSL-EKWLHPDAIPQRDREIEIQKLTLLQRISI 349
+R+ + F+ N +V + G L E+ +H + D I
Sbjct: 69 IRLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------------ARI 111
Query: 350 AIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNPTVS 406
DV SA+ Y H+ + H DLKP N L D + DFGL+ A P
Sbjct: 112 MKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA----ARFKPGKM 164
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILL 441
V GT YV+P+ L D +S G+++
Sbjct: 165 MRTKV-GTPYYVSPQV-LEGLYGPECDEWSAGVMM 197
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAIK+I+ ++ + A E + L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ F D+ IV + M G L D + R E KL
Sbjct: 76 KKLNHPCIIKIKNF-----FDAEDY-YIVLELMEGGEL-----FDKVVGNKRLKEATCKL 124
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 125 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 175 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA------ECKALKN 284
D + +G G F V K G A K I +R +S+ ++ E L+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
IRH N++ + + F+ ++ + + G L D + +++ E + L
Sbjct: 65 IRHPNII----TLHDI-FENKTDVVLILELVSGGEL-----FDFLAEKESLTEDEATQFL 114
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNI-LLDNDL---SAHIGDFGLSRFYQAV 400
++I LD +H + I H DLKP NI LLD ++ + DFG++ +A
Sbjct: 115 KQI---------LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT +VAPE + D++S G++ +++ P
Sbjct: 166 NEFK-----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 310 IVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAIDVASALDYLHQHCQEPIL 369
+V++ M GS+ +H +R E++ ++Q DVASALD+LH + I
Sbjct: 88 LVFEKMRGGSILSHIH-----KRRHFNELEASVVVQ------DVASALDFLH---NKGIA 133
Query: 370 HCDLKPSNILLD--NDLS-AHIGDFGLSRFYQ------AVSNPTVSSSIGVRGTIGYVAP 420
H DLKP NIL + N +S I DF L + +S P + + G+ Y+AP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC---GSAEYMAP 190
Query: 421 EY--GLGSEVS---TNGDVYSYGILLLEMVTTKKP 450
E E S D++S G++L +++ P
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAIK+I+ ++ + A E + L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ F D+ IV + M G L D + R E KL
Sbjct: 70 KKLNHPCIIKIKNF-----FDAEDY-YIVLELMEGGEL-----FDKVVGNKRLKEATCKL 118
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 169 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAIK+I+ ++ + A E + L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ F D+ IV + M G L D + R E KL
Sbjct: 70 KKLNHPCIIKIKNF-----FDAEDY-YIVLELMEGGEL-----FDKVVGNKRLKEATCKL 118
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 169 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVS--NPTVSSS 408
++ ALDY H + I+H D+KP N+++D+ + D+GL+ FY N V+S
Sbjct: 145 ELLKALDYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ ++P
Sbjct: 202 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAIK+I+ ++ + A E + L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ F D+ IV + M G L D + R E KL
Sbjct: 70 KKLNHPCIIKIKNF-----FDAEDY-YIVLELMEGGEL-----FDKVVGNKRLKEATCKL 118
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 169 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVS--NPTVSSS 408
++ ALDY H + I+H D+KP N+++D+ + D+GL+ FY N V+S
Sbjct: 140 ELLKALDYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ ++P
Sbjct: 197 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP 232
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAIK+I+ ++ + A E + L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ F D+ IV + M G L D + R E KL
Sbjct: 69 KKLNHPCIIKIKNF-----FDAEDY-YIVLELMEGGEL-----FDKVVGNKRLKEATCKL 117
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 118 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 168 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA------ECKALKN 284
D + +G G F V K G A K I +R +S+ ++ E L+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
IRH N++ + + F+ ++ + + G L D + +++ E + L
Sbjct: 72 IRHPNII----TLHDI-FENKTDVVLILELVSGGEL-----FDFLAEKESLTEDEATQFL 121
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNI-LLDNDL---SAHIGDFGLSRFYQAV 400
++I LD +H + I H DLKP NI LLD ++ + DFG++ +A
Sbjct: 122 KQI---------LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT +VAPE + D++S G++ +++ P
Sbjct: 173 NEFK-----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 195 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQ--AVSNPTVSSS 408
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY N V+S
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 409 I--GVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
G + Y +Y L D++S G +L M+ K+P
Sbjct: 195 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA------ECKALKN 284
D + +G G F V K G A K I +R +S+ ++ E L+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 285 IRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLL 344
IRH N++ + + F+ ++ + + G L D + +++ E + L
Sbjct: 86 IRHPNII----TLHDI-FENKTDVVLILELVSGGEL-----FDFLAEKESLTEDEATQFL 135
Query: 345 QRISIAIDVASALDYLHQHCQEPILHCDLKPSNI-LLDNDL---SAHIGDFGLSRFYQAV 400
++I LD +H + I H DLKP NI LLD ++ + DFG++ +A
Sbjct: 136 KQI---------LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 401 SNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLLEMVTTKKP 450
+ + GT +VAPE + D++S G++ +++ P
Sbjct: 187 NEFK-----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY
Sbjct: 144 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP------GQEYN 194
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSY-------GILLLEMVTTKKP 450
VR VA Y G E+ + +Y Y G +L M+ K+P
Sbjct: 195 VR-----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 236
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H I+H D+KP N+++D++ + D+GL+ FY
Sbjct: 137 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP------GQEYN 187
Query: 411 VRGTIGYVAPEYGLGSEVSTNGDVYSY-------GILLLEMVTTKKP 450
VR VA Y G E+ + +Y Y G +L M+ K+P
Sbjct: 188 VR-----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 135 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 185
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 186 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L+ + + IG GSFG +Y G G VAIK+ ++ + E K K ++
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ 60
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
+ I C + D+ +V + + SLE D R+ ++ + LL
Sbjct: 61 GGVGIPTIRWCGAE----GDYNVMVMELL-GPSLE-----DLFNFCSRKFSLKTVLLL-- 108
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNP 403
A + S ++Y+H + +H D+KP N L+ +I DFGL++ Y+
Sbjct: 109 ---ADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162
Query: 404 T---VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLL 442
+ + GT Y + LG E S D+ S G +L+
Sbjct: 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 204
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 134 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 184
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 185 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 226
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L+ + + IG GSFG +Y G G VAIK+ ++ + E K K ++
Sbjct: 5 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTK--HPQLHIESKFYKMMQ 62
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
+ I C + D+ +V + + SLE D R+ ++ + LL
Sbjct: 63 GGVGIPSIKWCGAE----GDYNVMVMELL-GPSLE-----DLFNFCSRKFSLKTVLLL-- 110
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNP 403
A + S ++Y+H + +H D+KP N L+ +I DFGL++ Y+
Sbjct: 111 ---ADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
Query: 404 T---VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLL 442
+ + GT Y + LG E S D+ S G +L+
Sbjct: 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 227 LKATDGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMAECKALKNIR 286
L+ + + IG GSFG +Y G G VAIK+ ++ + E K K ++
Sbjct: 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ 62
Query: 287 HKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQR 346
+ I C + D+ +V + + SLE D R+ ++ + LL
Sbjct: 63 GGVGIPTIRWCGAE----GDYNVMVMELL-GPSLE-----DLFNFCSRKFSLKTVLLL-- 110
Query: 347 ISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQAVSNP 403
A + S ++Y+H + +H D+KP N L+ +I DFGL++ Y+
Sbjct: 111 ---ADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
Query: 404 T---VSSSIGVRGTIGYVAPEYGLGSEVSTNGDVYSYGILLL 442
+ + GT Y + LG E S D+ S G +L+
Sbjct: 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 134 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 184
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 185 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 154 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 204
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 205 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 246
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 352 DVASALDYLHQHCQEPILHCDLKPSNILLDNDLSA-HIGDFGLSRFYQAVSNPTVSSSIG 410
++ ALDY H + I+H D+KP N+++D++L + D+GL+ FY
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------GKEYN 183
Query: 411 VRGTIGYVAPEYGLGSEVSTN-------GDVYSYGILLLEMVTTKKP 450
VR VA Y G E+ + D++S G + M+ K+P
Sbjct: 184 VR-----VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAI++I+ ++ + A E + L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ + D+ IV + M G L D + R E KL
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGEL-----FDKVVGNKRLKEATCKL 257
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 258 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 308 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 349
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 231 DGFSSTNLIGVGSFGSVYKGVFDEDGTVVAIKVINLQRQGASKSFMA--------ECKAL 282
D + + +G G+ G V + VAI++I+ ++ + A E + L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 283 KNIRHKNLVRVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQ-KL 341
K + H ++++ + D+ IV + M G L D + R E KL
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGEL-----FDKVVGNKRLKEATCKL 243
Query: 342 TLLQRISIAIDVASALDYLHQHCQEPILHCDLKPSNILL---DNDLSAHIGDFGLSRFYQ 398
Q + A+ YLH++ I+H DLKP N+LL + D I DFG S+
Sbjct: 244 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293
Query: 399 AVSNPTVSSSIGVRGTIGYVAPEYGLGSEVSTNG-----DVYSYGILLL 442
S + GT Y+APE + V T G D +S G++L
Sbjct: 294 ETSLMRT-----LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 335
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 233 FSSTNLIGVGSFGSVYKGVFDEDGTVVAIK-VINLQRQGASKSFMAECKALKNIRHKNLV 291
++ I GS+G+V GV D +G VAIK V N G + + +++ K + + +
Sbjct: 24 YTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE--I 80
Query: 292 RVITSCSSVDFQGNDFKAIVYKYMPNGSLEKWLHPDAIPQRDREIEIQKLTLLQRISIAI 351
R++ + G + I + E +H + ++ ++ QRI I+
Sbjct: 81 RLLNHFHHPNILG--LRDIFVHFE-----EPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 352 DVASALDY-----LHQHCQEPILHCDLKPSNILLDNDLSAHIGDFGLSRFYQAVSNPTVS 406
Y LH + ++H DL P NILL ++ I DF L+R A +N T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT-- 191
Query: 407 SSIGVRGTIGYVAPEYGLGSEVSTN-GDVYSYGILLLEMVTTK 448
+ R Y APE + + T D++S G ++ EM K
Sbjct: 192 HYVTHR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,810,340
Number of Sequences: 62578
Number of extensions: 515868
Number of successful extensions: 3748
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 1411
Number of HSP's gapped (non-prelim): 1216
length of query: 452
length of database: 14,973,337
effective HSP length: 102
effective length of query: 350
effective length of database: 8,590,381
effective search space: 3006633350
effective search space used: 3006633350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)