Query 041634
Match_columns 363
No_of_seqs 335 out of 2222
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 09:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041634.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041634hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.8 2.9E-21 6.2E-26 166.7 5.7 144 3-172 26-184 (226)
2 PF13962 PGG: Domain of unknow 99.8 4.2E-20 9E-25 152.2 7.7 102 180-287 1-113 (113)
3 KOG4412 26S proteasome regulat 99.8 5.2E-19 1.1E-23 152.8 10.2 144 2-172 59-215 (226)
4 KOG0509 Ankyrin repeat and DHH 99.8 1.7E-17 3.6E-22 166.6 16.4 158 5-171 68-255 (600)
5 KOG0512 Fetal globin-inducing 99.7 1.6E-16 3.4E-21 136.6 9.8 148 14-185 62-224 (228)
6 PHA02874 ankyrin repeat protei 99.7 2.4E-16 5.1E-21 158.5 12.2 160 4-171 113-298 (434)
7 PHA02946 ankyin-like protein; 99.7 6.4E-16 1.4E-20 156.0 13.4 161 4-171 61-252 (446)
8 PHA02859 ankyrin repeat protei 99.6 9E-16 1.9E-20 139.8 11.5 93 15-118 21-132 (209)
9 PHA02878 ankyrin repeat protei 99.6 7.4E-16 1.6E-20 156.8 11.7 137 5-170 157-309 (477)
10 PHA02876 ankyrin repeat protei 99.6 1.4E-15 3.1E-20 161.1 13.2 162 4-172 262-453 (682)
11 KOG0510 Ankyrin repeat protein 99.6 4.9E-16 1.1E-20 159.2 8.9 112 9-126 219-358 (929)
12 PHA02874 ankyrin repeat protei 99.6 2.5E-15 5.4E-20 151.0 13.6 137 27-171 102-264 (434)
13 PHA03095 ankyrin-like protein; 99.6 3.5E-15 7.7E-20 150.8 14.6 86 5-97 37-125 (471)
14 PHA02875 ankyrin repeat protei 99.6 1.8E-15 3.8E-20 150.9 12.1 141 5-171 25-178 (413)
15 PHA02876 ankyrin repeat protei 99.6 1.5E-15 3.3E-20 160.9 12.0 140 5-170 331-485 (682)
16 KOG0510 Ankyrin repeat protein 99.6 5.1E-16 1.1E-20 159.1 7.9 111 9-125 267-393 (929)
17 PHA02791 ankyrin-like protein; 99.6 3E-15 6.4E-20 142.4 11.3 105 11-125 26-144 (284)
18 PHA02875 ankyrin repeat protei 99.6 3.6E-15 7.7E-20 148.7 12.4 114 5-125 58-184 (413)
19 PHA02791 ankyrin-like protein; 99.6 2.1E-15 4.5E-20 143.5 9.5 104 15-126 61-177 (284)
20 KOG0509 Ankyrin repeat and DHH 99.6 3.1E-15 6.7E-20 150.4 10.3 103 15-124 44-160 (600)
21 PHA02716 CPXV016; CPX019; EVM0 99.6 4.9E-15 1.1E-19 156.2 12.0 78 12-95 174-253 (764)
22 PHA02878 ankyrin repeat protei 99.6 6.4E-15 1.4E-19 149.9 12.3 102 16-125 38-217 (477)
23 PLN03192 Voltage-dependent pot 99.6 6E-15 1.3E-19 159.5 12.3 76 15-98 525-600 (823)
24 PHA02743 Viral ankyrin protein 99.6 4E-15 8.7E-20 130.6 8.8 114 5-125 10-144 (166)
25 PHA03100 ankyrin repeat protei 99.6 6.7E-15 1.4E-19 149.3 11.6 159 5-171 96-293 (480)
26 PHA02859 ankyrin repeat protei 99.6 1.1E-14 2.3E-19 132.7 11.2 135 11-171 47-202 (209)
27 PHA02798 ankyrin-like protein; 99.6 1E-14 2.3E-19 148.8 11.7 87 5-97 99-190 (489)
28 PHA02989 ankyrin repeat protei 99.6 1.5E-14 3.3E-19 147.9 11.6 17 154-170 282-298 (494)
29 PHA02741 hypothetical protein; 99.5 1.1E-14 2.5E-19 128.0 8.2 108 12-125 18-148 (169)
30 PHA03095 ankyrin-like protein; 99.5 5.8E-14 1.3E-18 142.0 12.6 108 5-119 73-197 (471)
31 PHA02716 CPXV016; CPX019; EVM0 99.5 7.4E-14 1.6E-18 147.4 12.1 85 27-117 153-255 (764)
32 PHA02946 ankyin-like protein; 99.5 9.3E-14 2E-18 140.4 12.2 103 16-125 38-156 (446)
33 PHA02741 hypothetical protein; 99.5 6.8E-14 1.5E-18 123.0 9.7 115 45-182 15-154 (169)
34 PHA03100 ankyrin repeat protei 99.5 9.4E-14 2E-18 140.9 11.2 160 4-171 57-260 (480)
35 PHA02736 Viral ankyrin protein 99.5 2.8E-14 6.1E-19 123.3 5.4 107 13-125 15-142 (154)
36 KOG0195 Integrin-linked kinase 99.5 1.8E-14 4E-19 132.7 3.3 117 34-174 17-146 (448)
37 PHA02795 ankyrin-like protein; 99.5 2.5E-13 5.5E-18 135.0 10.8 137 10-172 111-265 (437)
38 PHA02884 ankyrin repeat protei 99.5 3.3E-13 7.2E-18 128.9 10.9 107 11-124 29-152 (300)
39 KOG0508 Ankyrin repeat protein 99.4 1.1E-13 2.3E-18 134.9 5.9 129 14-170 83-224 (615)
40 TIGR00870 trp transient-recept 99.4 5.9E-13 1.3E-17 142.6 8.0 117 49-170 126-266 (743)
41 KOG4177 Ankyrin [Cell wall/mem 99.4 9.7E-13 2.1E-17 142.0 9.6 140 9-170 501-653 (1143)
42 PHA02736 Viral ankyrin protein 99.4 3.5E-13 7.5E-18 116.4 5.0 108 44-171 10-136 (154)
43 PHA02989 ankyrin repeat protei 99.4 3.8E-12 8.3E-17 130.2 11.5 100 15-120 69-192 (494)
44 KOG0505 Myosin phosphatase, re 99.4 1.6E-12 3.5E-17 128.6 8.3 139 9-170 67-273 (527)
45 PHA02798 ankyrin-like protein; 99.3 4.5E-12 9.8E-17 129.5 11.3 101 15-121 36-157 (489)
46 KOG0514 Ankyrin repeat protein 99.3 9.5E-13 2.1E-17 124.8 5.7 142 9-175 262-422 (452)
47 PHA02743 Viral ankyrin protein 99.3 3.1E-12 6.8E-17 112.2 7.5 106 42-171 11-138 (166)
48 KOG0508 Ankyrin repeat protein 99.3 1.4E-12 3E-17 127.2 5.2 116 5-128 107-234 (615)
49 PHA02795 ankyrin-like protein; 99.3 6.1E-12 1.3E-16 125.2 9.7 110 3-121 139-266 (437)
50 PHA02917 ankyrin-like protein; 99.3 1E-11 2.2E-16 130.9 11.2 64 8-73 25-94 (661)
51 TIGR00870 trp transient-recept 99.3 1.2E-11 2.7E-16 132.5 11.7 150 12-171 14-218 (743)
52 KOG0195 Integrin-linked kinase 99.3 7.2E-12 1.6E-16 115.7 7.0 95 15-117 34-141 (448)
53 PF13857 Ank_5: Ankyrin repeat 99.3 4.3E-12 9.3E-17 91.1 4.2 52 40-96 5-56 (56)
54 PHA02730 ankyrin-like protein; 99.3 2.2E-11 4.7E-16 126.8 10.7 152 12-168 38-242 (672)
55 KOG0507 CASK-interacting adapt 99.3 5.1E-12 1.1E-16 129.2 5.6 159 13-179 80-272 (854)
56 PHA02884 ankyrin repeat protei 99.2 3.3E-11 7.1E-16 115.3 8.5 101 46-170 27-146 (300)
57 PHA02730 ankyrin-like protein; 99.2 8.1E-11 1.7E-15 122.6 11.2 129 17-170 345-505 (672)
58 PHA02792 ankyrin-like protein; 99.2 3.4E-11 7.4E-16 124.2 8.2 90 3-98 93-224 (631)
59 PF12796 Ank_2: Ankyrin repeat 99.2 1.3E-10 2.9E-15 90.5 9.1 68 19-98 1-68 (89)
60 KOG0512 Fetal globin-inducing 99.2 5.3E-11 1.2E-15 102.7 7.2 104 9-120 91-209 (228)
61 KOG4177 Ankyrin [Cell wall/mem 99.2 5.9E-11 1.3E-15 128.5 7.9 98 49-170 505-615 (1143)
62 PHA02917 ankyrin-like protein; 99.1 1.6E-10 3.4E-15 122.0 9.9 88 32-122 118-242 (661)
63 KOG3676 Ca2+-permeable cation 99.1 2.2E-10 4.8E-15 118.5 10.5 139 15-171 143-318 (782)
64 PLN03192 Voltage-dependent pot 99.1 2.1E-10 4.5E-15 124.4 10.4 113 4-126 547-672 (823)
65 PHA02792 ankyrin-like protein; 99.1 1.9E-10 4.2E-15 118.7 8.5 134 18-172 74-226 (631)
66 cd00204 ANK ankyrin repeats; 99.1 5.5E-10 1.2E-14 90.4 9.2 102 13-122 5-119 (126)
67 cd00204 ANK ankyrin repeats; 99.1 5E-10 1.1E-14 90.7 8.5 101 47-171 3-116 (126)
68 PF12796 Ank_2: Ankyrin repeat 99.0 3.7E-10 8E-15 88.0 6.1 62 55-125 1-75 (89)
69 KOG0502 Integral membrane anky 99.0 2.7E-10 5.8E-15 101.8 5.1 101 13-121 158-271 (296)
70 COG0666 Arp FOG: Ankyrin repea 99.0 1.6E-09 3.5E-14 96.5 9.2 103 15-124 73-195 (235)
71 KOG0502 Integral membrane anky 99.0 9.1E-10 2E-14 98.5 6.3 125 17-171 131-269 (296)
72 KOG0507 CASK-interacting adapt 99.0 6E-10 1.3E-14 114.3 5.8 129 17-170 5-157 (854)
73 KOG0505 Myosin phosphatase, re 98.9 1.6E-09 3.4E-14 107.6 7.2 72 19-98 44-115 (527)
74 KOG0514 Ankyrin repeat protein 98.9 5E-09 1.1E-13 99.8 7.5 110 7-124 294-422 (452)
75 PF13637 Ank_4: Ankyrin repeat 98.9 3.3E-09 7.2E-14 75.2 4.8 26 51-76 1-26 (54)
76 PTZ00322 6-phosphofructo-2-kin 98.9 6.1E-09 1.3E-13 110.3 9.0 95 15-117 82-196 (664)
77 PF13637 Ank_4: Ankyrin repeat 98.8 7E-09 1.5E-13 73.5 5.9 53 16-71 2-54 (54)
78 KOG3676 Ca2+-permeable cation 98.7 2.3E-08 5E-13 103.8 8.1 103 14-124 183-323 (782)
79 KOG1710 MYND Zn-finger and ank 98.7 8.7E-08 1.9E-12 88.9 9.7 103 17-126 14-129 (396)
80 PTZ00322 6-phosphofructo-2-kin 98.7 2.9E-08 6.3E-13 105.2 6.4 68 53-125 84-164 (664)
81 KOG0515 p53-interacting protei 98.6 4.1E-08 9E-13 97.3 6.1 73 18-98 553-625 (752)
82 PF13857 Ank_5: Ankyrin repeat 98.6 2E-08 4.3E-13 71.9 2.8 43 70-116 1-56 (56)
83 KOG4214 Myotrophin and similar 98.5 1.8E-07 3.9E-12 73.1 6.1 104 18-169 5-108 (117)
84 COG0666 Arp FOG: Ankyrin repea 98.5 2.4E-07 5.1E-12 82.4 7.6 89 3-98 94-189 (235)
85 PF13606 Ank_3: Ankyrin repeat 98.4 2.4E-07 5.2E-12 57.7 3.4 27 50-76 1-27 (30)
86 KOG0782 Predicted diacylglycer 98.3 9E-07 1.9E-11 88.5 7.1 103 15-123 866-981 (1004)
87 KOG0818 GTPase-activating prot 98.3 1.8E-06 3.9E-11 85.3 7.8 88 11-126 129-217 (669)
88 PF00023 Ank: Ankyrin repeat H 98.3 1E-06 2.2E-11 55.9 4.1 27 50-76 1-27 (33)
89 KOG4214 Myotrophin and similar 98.3 1.6E-06 3.4E-11 67.9 5.5 74 14-95 33-106 (117)
90 KOG0522 Ankyrin repeat protein 98.2 2.5E-06 5.3E-11 85.2 5.8 76 17-98 22-97 (560)
91 KOG0515 p53-interacting protei 98.2 2.8E-06 6.2E-11 84.5 5.9 78 10-94 578-655 (752)
92 KOG0506 Glutaminase (contains 98.0 4.1E-06 8.8E-11 82.5 3.9 81 18-125 509-589 (622)
93 KOG1710 MYND Zn-finger and ank 97.9 3.1E-05 6.7E-10 72.3 6.7 82 9-98 39-121 (396)
94 KOG4369 RTK signaling protein 97.8 8.5E-06 1.8E-10 87.2 2.4 79 13-98 755-833 (2131)
95 KOG0705 GTPase-activating prot 97.7 6.3E-05 1.4E-09 75.8 6.0 80 13-98 622-703 (749)
96 KOG4369 RTK signaling protein 97.7 1.8E-05 4E-10 84.7 1.8 112 14-129 925-1080(2131)
97 KOG0783 Uncharacterized conser 97.6 3.8E-05 8.2E-10 80.3 3.7 89 27-120 28-130 (1267)
98 KOG0520 Uncharacterized conser 97.5 0.00025 5.3E-09 76.2 7.0 79 42-125 565-657 (975)
99 KOG0783 Uncharacterized conser 97.1 0.00042 9.1E-09 72.8 4.4 76 15-98 52-128 (1267)
100 KOG0782 Predicted diacylglycer 97.1 0.00066 1.4E-08 68.5 4.8 76 17-98 901-976 (1004)
101 KOG0506 Glutaminase (contains 97.1 0.00025 5.5E-09 70.2 1.8 47 47-98 502-548 (622)
102 KOG0521 Putative GTPase activa 96.7 0.0018 3.8E-08 69.7 5.0 71 49-124 654-737 (785)
103 PF00023 Ank: Ankyrin repeat H 96.7 0.00074 1.6E-08 42.5 1.2 18 108-125 1-18 (33)
104 KOG0522 Ankyrin repeat protein 96.7 0.0031 6.7E-08 63.5 5.9 60 14-76 54-113 (560)
105 smart00248 ANK ankyrin repeats 96.5 0.0042 9.2E-08 35.7 3.5 27 50-76 1-27 (30)
106 KOG2384 Major histocompatibili 96.3 0.005 1.1E-07 54.6 4.2 54 41-98 2-55 (223)
107 PF13606 Ank_3: Ankyrin repeat 96.1 0.0015 3.2E-08 40.4 0.0 18 108-125 1-18 (30)
108 KOG0818 GTPase-activating prot 96.0 0.01 2.2E-07 59.4 5.3 60 11-73 163-222 (669)
109 KOG0511 Ankyrin repeat protein 95.8 0.027 5.8E-07 54.8 7.0 60 16-79 37-96 (516)
110 KOG0521 Putative GTPase activa 95.8 0.0074 1.6E-07 65.0 3.6 88 16-116 657-744 (785)
111 KOG0705 GTPase-activating prot 95.4 0.022 4.8E-07 58.0 5.3 63 11-76 657-720 (749)
112 KOG0520 Uncharacterized conser 95.3 0.0085 1.8E-07 64.7 2.1 104 15-125 574-696 (975)
113 KOG3609 Receptor-activated Ca2 94.5 0.06 1.3E-06 57.3 5.5 95 18-125 28-147 (822)
114 KOG2505 Ankyrin repeat protein 92.1 0.11 2.3E-06 52.4 2.8 44 50-98 429-472 (591)
115 KOG3609 Receptor-activated Ca2 87.9 3 6.6E-05 44.9 9.4 58 17-76 90-156 (822)
116 KOG2384 Major histocompatibili 85.7 3 6.4E-05 37.4 6.7 60 15-76 12-71 (223)
117 KOG2887 Membrane protein invol 70.7 64 0.0014 28.4 10.2 30 214-243 40-69 (175)
118 KOG2505 Ankyrin repeat protein 69.9 5.4 0.00012 40.6 4.0 50 16-71 431-480 (591)
119 PF12304 BCLP: Beta-casein lik 68.3 18 0.00039 32.1 6.4 29 222-250 39-68 (188)
120 PF10966 DUF2768: Protein of u 63.5 14 0.0003 26.5 3.9 40 269-308 2-44 (58)
121 PTZ00370 STEVOR; Provisional 62.8 9.7 0.00021 36.2 3.9 20 305-324 262-281 (296)
122 PF11023 DUF2614: Protein of u 59.7 38 0.00082 27.6 6.3 51 263-320 13-63 (114)
123 TIGR01478 STEVOR variant surfa 57.1 9.4 0.0002 36.2 2.8 8 349-356 286-293 (295)
124 KOG0511 Ankyrin repeat protein 56.9 20 0.00043 35.5 5.0 42 52-98 37-78 (516)
125 PF06570 DUF1129: Protein of u 53.3 1.7E+02 0.0037 26.3 11.7 11 159-169 43-53 (206)
126 PRK02935 hypothetical protein; 50.7 86 0.0019 25.3 6.8 47 263-316 14-60 (110)
127 PF11929 DUF3447: Domain of un 49.9 33 0.00072 25.5 4.4 48 17-74 8-55 (76)
128 KOG4591 Uncharacterized conser 45.9 13 0.00029 33.5 1.8 20 49-68 220-239 (280)
129 PF10658 DUF2484: Protein of u 43.1 1.2E+02 0.0025 23.1 6.3 44 277-320 10-54 (77)
130 PF07344 Amastin: Amastin surf 42.2 1.4E+02 0.003 25.6 7.6 46 260-305 60-106 (155)
131 PF06128 Shigella_OspC: Shigel 38.9 79 0.0017 29.4 5.6 58 19-76 219-279 (284)
132 PF05313 Pox_P21: Poxvirus P21 38.0 1.1E+02 0.0023 27.2 6.2 49 234-290 64-112 (189)
133 PRK10714 undecaprenyl phosphat 35.0 2.8E+02 0.0062 26.6 9.4 76 271-354 237-320 (325)
134 PF06610 DUF1144: Protein of u 33.2 1.7E+02 0.0036 24.9 6.2 24 224-247 12-35 (143)
135 PF04304 DUF454: Protein of un 31.9 1.4E+02 0.0031 21.7 5.3 41 255-303 21-61 (71)
136 KOG4591 Uncharacterized conser 31.2 37 0.00079 30.8 2.2 17 101-117 252-268 (280)
137 PF02990 EMP70: Endomembrane p 31.1 5.3E+02 0.011 26.8 11.2 52 268-320 303-355 (521)
138 PF02932 Neur_chan_memb: Neuro 30.5 1.7E+02 0.0036 24.8 6.5 53 259-316 24-76 (237)
139 MTH00213 ND6 NADH dehydrogenas 30.3 1.2E+02 0.0026 27.7 5.3 46 272-317 26-74 (239)
140 TIGR01569 A_tha_TIGR01569 plan 29.9 3.5E+02 0.0075 23.2 8.1 30 211-240 35-64 (154)
141 PF02366 PMT: Dolichyl-phospha 29.2 4.4E+02 0.0094 23.9 9.3 24 221-244 131-154 (245)
142 KOG4220 Muscarinic acetylcholi 28.7 1.8E+02 0.004 29.5 6.7 107 215-324 98-223 (503)
143 PF07062 Clc-like: Clc-like; 28.4 2E+02 0.0043 26.3 6.5 22 221-242 136-157 (211)
144 KOG4671 Brain cell membrane pr 27.8 1.6E+02 0.0034 26.3 5.5 36 252-288 9-44 (201)
145 KOG0828 Predicted E3 ubiquitin 27.5 4E+02 0.0086 27.6 8.9 59 266-324 329-387 (636)
146 PHA02849 putative transmembran 27.2 1.7E+02 0.0037 22.2 4.8 45 308-358 30-75 (82)
147 PF05915 DUF872: Eukaryotic pr 26.3 1.5E+02 0.0032 24.4 4.8 47 262-308 44-91 (115)
148 PF12273 RCR: Chitin synthesis 26.3 53 0.0011 27.3 2.3 11 293-303 1-11 (130)
149 PF12676 DUF3796: Protein of u 25.8 3.3E+02 0.0072 22.4 6.9 41 274-314 65-105 (118)
150 PRK10483 tryptophan permease; 25.4 2E+02 0.0043 29.1 6.6 62 262-324 156-217 (414)
151 PRK06638 NADH:ubiquinone oxido 25.3 4.6E+02 0.01 23.4 8.4 34 282-315 43-77 (198)
152 TIGR00383 corA magnesium Mg(2+ 22.3 2.5E+02 0.0055 26.6 6.5 21 267-287 260-280 (318)
153 PF10661 EssA: WXG100 protein 21.3 83 0.0018 26.9 2.6 23 269-291 121-143 (145)
154 PF15339 Afaf: Acrosome format 20.9 1.4E+02 0.0031 26.3 3.9 25 260-284 130-154 (200)
155 COG0581 PstA ABC-type phosphat 20.8 3.1E+02 0.0067 26.4 6.6 54 270-323 82-139 (292)
156 PRK12585 putative monovalent c 20.5 5.2E+02 0.011 23.3 7.4 10 250-259 29-38 (197)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.9e-21 Score=166.68 Aligned_cols=144 Identities=22% Similarity=0.118 Sum_probs=114.6
Q ss_pred CCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHh-CCCCchhh
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDE-LPDQSLDK 81 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~-~p~~~~~~ 81 (363)
+|-.-...++|+..++||.|+.- |..+ ++++|++.++..++..|..|+||||+||..|+.|+|+.|+.+ +|| .+
T Consensus 26 ~~kSL~~r~dqD~Rt~LHwa~S~-g~~e-iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad-vn-- 100 (226)
T KOG4412|consen 26 DPKSLNARDDQDGRTPLHWACSF-GHVE-IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD-VN-- 100 (226)
T ss_pred ChhhhhccccccCCceeeeeeec-Cchh-HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC-cc--
Confidence 44344456677888999999987 7766 556666567788888899999999999999999999999999 888 55
Q ss_pred hhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhh
Q 041634 82 MTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSV 148 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~ 148 (363)
..++.|+|+||+|+- ++.++.+|..|.||||-||..|..+++ +++..++.
T Consensus 101 --a~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvi------------e~Li~~~a--- 163 (226)
T KOG4412|consen 101 --ATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVI------------EYLISQGA--- 163 (226)
T ss_pred --eecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhH------------HHHHhcCC---
Confidence 689999999999996 678899999999999999999976544 22222222
Q ss_pred ccccccccCCCCCCCHHHHH-HHhc
Q 041634 149 TMAHFLNHGNNMGFTPEELF-ATAN 172 (363)
Q Consensus 149 ~~~~~~~~~N~~G~Tp~dl~-~~~~ 172 (363)
..+..|+.|+||+..+ .+.|
T Consensus 164 ----~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 164 ----PLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred ----CCCcccccCccHHHHHHhccC
Confidence 2678899999998887 3344
No 2
>PF13962 PGG: Domain of unknown function
Probab=99.81 E-value=4.2e-20 Score=152.22 Aligned_cols=102 Identities=36% Similarity=0.565 Sum_probs=87.2
Q ss_pred HHHHhhhcccchhh-------hhhhhccCCCCCCCC---CCccccccch-hhHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 041634 180 KEWLIRTTEGCSVV-------AFAAAYTVPGGSDEN---TGYPILINHL-FFVAFTVSDVLSLTFSLAAVVPFLSMLTSP 248 (363)
Q Consensus 180 ~~~~k~t~~s~~~V-------~FaA~ftvPGG~~~~---~G~p~l~~~~-~F~~F~i~d~iA~~~S~~a~~~fl~il~s~ 248 (363)
|||++++.+++++| ||+|++|+|||++|| .|+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 46777777777665 999999999999664 6999999888 999999999999999999998887322
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041634 249 FRLEDCKHSLPNKMILGFTFLLLSVCLMMVAFIATILLM 287 (363)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~aF~~~~~~v 287 (363)
+++.+..+..+.++..++++|+.+|++||++|+|+|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 455556667788999999999999999999999976
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=5.2e-19 Score=152.79 Aligned_cols=144 Identities=20% Similarity=0.114 Sum_probs=113.0
Q ss_pred CCCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhh
Q 041634 2 SSIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~ 81 (363)
|-|++..++.+..+=+|||.|+.. |+.+.|..+ ...++.+++..++.|+||||+||..|..||++.|++.++. +.
T Consensus 59 sq~nv~~ddkDdaGWtPlhia~s~-g~~evVk~L-l~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~--i~- 133 (226)
T KOG4412|consen 59 SQPNVKPDDKDDAGWTPLHIAASN-GNDEVVKEL-LNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL--IR- 133 (226)
T ss_pred hcCCCCCCCccccCCchhhhhhhc-CcHHHHHHH-hcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCC--Cc-
Confidence 456777777777788999999988 876655555 4546899999999999999999999999999999999965 33
Q ss_pred hhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhh
Q 041634 82 MTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSV 148 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~ 148 (363)
.+|..|+||||-|+. ++-+|.+|+.|+||||.|.-.++++.. . ++ |+
T Consensus 134 --~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a-------~-----lL----V~-- 193 (226)
T KOG4412|consen 134 --IKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVA-------V-----LL----VR-- 193 (226)
T ss_pred --ccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHH-------H-----HH----HH--
Confidence 799999999999997 567899999999999999666766432 1 11 11
Q ss_pred ccccccccCCCCCCCHHHHHHHhc
Q 041634 149 TMAHFLNHGNNMGFTPEELFATAN 172 (363)
Q Consensus 149 ~~~~~~~~~N~~G~Tp~dl~~~~~ 172 (363)
........|++| ||..++..+-
T Consensus 194 -~gAd~~~edke~-t~~~~a~~~l 215 (226)
T KOG4412|consen 194 -AGADTDREDKEG-TALRIACNEL 215 (226)
T ss_pred -hccceeeccccC-chHHHHHHHH
Confidence 111256788888 9988765543
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.75 E-value=1.7e-17 Score=166.60 Aligned_cols=158 Identities=20% Similarity=0.067 Sum_probs=115.2
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
|.+.+++++..-+.||.|+.. ++.+ |.+.+.+ .+++++..+ .-|.||||+||++|+..+|..|+++++| +.
T Consensus 68 g~~v~~~D~~g~tlLHWAAiN-Nrl~-v~r~li~-~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAd-pt---- 139 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAIN-NRLD-VARYLIS-HGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGAD-PT---- 139 (600)
T ss_pred CcCCCCCCcCCccceeHHHHc-CcHH-HHHHHHH-cCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCC-Cc----
Confidence 777778888888999999998 7666 5555555 367788777 5589999999999999999999999998 54
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc--------------CCchhhhH
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM--------------EGPALLLR 136 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~--------------~~~al~l~ 136 (363)
.+|.+|-|+||+||. ..++|.+|++|+||||+||.+|+...+.++ +.+++...
T Consensus 140 ~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa 219 (600)
T KOG0509|consen 140 LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWA 219 (600)
T ss_pred eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHH
Confidence 799999999999998 567899999999999999999876522111 22222211
Q ss_pred HHHHHHHHhhhhccc--cccccCCCCCCCHHHHHHHh
Q 041634 137 DELLWYERVKSVTMA--HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 137 ~~l~~~~~V~~~~~~--~~~~~~N~~G~Tp~dl~~~~ 171 (363)
-.-...+.+. .+.+ ...+..|.+|+||.+++++.
T Consensus 220 ~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 220 VVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 0000011122 2221 24678888999999998765
No 5
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.68 E-value=1.6e-16 Score=136.63 Aligned_cols=148 Identities=18% Similarity=0.051 Sum_probs=114.1
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
+.-+.+..|+.+ +...+|.++|.+ ....++.+|.+|.||||-|+.+||.+||++|+..+++ .. .+...|||||
T Consensus 62 dp~rl~lwaae~-nrl~eV~~lL~e-~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~----a~T~~GWTPL 134 (228)
T KOG0512|consen 62 DPIRLLLWAAEK-NRLTEVQRLLSE-KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KE----AKTNEGWTPL 134 (228)
T ss_pred CHHHHHHHHHhh-ccHHHHHHHHHh-ccccccccccccccHHHHHHhcCchHHHHHHHHccCC-cc----cccccCccch
Confidence 344667778876 888888888877 5667899999999999999999999999999999988 43 6889999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|-|++ ++++|++-+.-.||||+|+...+.... .+-|+....+. ...+|+.
T Consensus 135 hSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t----------~~~Ll~dryi~-------pg~~nn~ 197 (228)
T KOG0512|consen 135 HSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDT----------LELLLHDRYIH-------PGLKNNL 197 (228)
T ss_pred hhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHH----------HHHHhhccccC-------hhhhcCc
Confidence 99998 788999999999999999987643211 01111122222 3577999
Q ss_pred CCCHHHHHHHh--cHHHHHhhHHHHhh
Q 041634 161 GFTPEELFATA--NNELRAQSKEWLIR 185 (363)
Q Consensus 161 G~Tp~dl~~~~--~~~l~~~~~~~~k~ 185 (363)
+.||.+++... ...+.+.++..+..
T Consensus 198 eeta~~iARRT~~s~~lfe~~e~~~~~ 224 (228)
T KOG0512|consen 198 EETAFDIARRTSMSHYLFEIVEGCMNS 224 (228)
T ss_pred cchHHHHHHHhhhhHHHHHHHHHHhhC
Confidence 99999999875 45566666655543
No 6
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.68 E-value=2.4e-16 Score=158.47 Aligned_cols=160 Identities=15% Similarity=0.044 Sum_probs=104.7
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.|.+.+.....++++||+|+.. |+.+.+..+ .+ .+.+++.+|.+|.||||+|++.|+.++++.|++.+++ ..
T Consensus 113 ~g~d~n~~~~~g~T~Lh~A~~~-~~~~~v~~L-l~-~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~-~n---- 184 (434)
T PHA02874 113 CGIDVNIKDAELKTFLHYAIKK-GDLESIKML-FE-YGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY-AN---- 184 (434)
T ss_pred CcCCCCCCCCCCccHHHHHHHC-CCHHHHHHH-Hh-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CC----
Confidence 4556666666778899999987 777655444 44 3566777888899999999999999999999988877 43
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc-----------cccCCchhhhHHHH
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS-----------EKMEGPALLLRDEL 139 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~-----------~~~~~~al~l~~~l 139 (363)
.+|..|+||||+|++ +..++.+|.+|.||||+|+..++..+. +..+.+++......
T Consensus 185 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~ 264 (434)
T PHA02874 185 VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINP 264 (434)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhc
Confidence 578888888888887 345566777788888888765542211 11122333322111
Q ss_pred HHHHHhhhhcc--ccccccCCCCCCCHHHHHHHh
Q 041634 140 LWYERVKSVTM--AHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 140 ~~~~~V~~~~~--~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
....++.+.+- ....+.+|++|+||++++.+.
T Consensus 265 ~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~ 298 (434)
T PHA02874 265 PCDIDIIDILLYHKADISIKDNKGENPIDTAFKY 298 (434)
T ss_pred CCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHh
Confidence 10111211111 124678899999999998653
No 7
>PHA02946 ankyin-like protein; Provisional
Probab=99.66 E-value=6.4e-16 Score=156.01 Aligned_cols=161 Identities=12% Similarity=0.034 Sum_probs=102.8
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc--HHHHHHHHHhCCCCchhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK--SDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~--~eiV~~LL~~~p~~~~~~ 81 (363)
.|.+.+....+++++||+|+.. |+.+ ++++|++ .+.+++.+|.+|.||||+|+..++ .++++.|++++++ ...
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~-g~~e-iv~lLL~-~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gad-in~- 135 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKI-NNNR-IVAMLLT-HGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAK-INN- 135 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHc-CCHH-HHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-ccc-
Confidence 4566666777788999999987 7765 5555555 357788889999999999887664 7889999998888 543
Q ss_pred hhccCCCCCcHHHHHHh------------chhhccccCCCCcHHHHHHhhCccc--Cc-------------cccCCchhh
Q 041634 82 MTRQNKAGNTIQHETAT------------RRLVRKIDYNGNTILHMAGIKIKDY--GS-------------EKMEGPALL 134 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa~------------~~lin~~D~~GnT~LHlAa~~~~~~--~~-------------~~~~~~al~ 134 (363)
..|..|+||||.|.. +..++.+|.+|+||||+|+..++.. ++ +.-+.+++.
T Consensus 136 --~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH 213 (446)
T PHA02946 136 --SVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLH 213 (446)
T ss_pred --ccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 456777777764443 3445666677777777666544321 11 111223433
Q ss_pred hHHHHH--HHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 135 LRDELL--WYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 135 l~~~l~--~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+...-. -.+.++-..+....+.+|++|+||++++.+.
T Consensus 214 ~Aa~~~~~~~~iv~lLl~gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 214 IVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred HHHHcCCCcHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 322110 1122222233345788999999999998765
No 8
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.65 E-value=9e-16 Score=139.76 Aligned_cols=93 Identities=13% Similarity=0.105 Sum_probs=58.6
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcC--cHHHHHHHHHhCCCCchhhhhccC-CCCCc
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTK--KSDLVIKLLDELPDQSLDKMTRQN-KAGNT 91 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G--~~eiV~~LL~~~p~~~~~~~~~~d-~~G~t 91 (363)
..++||.|+.. |+.+.+..++.. ++..|..|.||||.|+.+| +.++++.|++++++ +. .+| ..|+|
T Consensus 21 ~~~pL~~A~~~-~~~~~vk~Li~~-----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad-vn----~~~~~~g~T 89 (209)
T PHA02859 21 YCNPLFYYVEK-DDIEGVKKWIKF-----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGAD-VN----FKTRDNNLS 89 (209)
T ss_pred cCcHHHHHHHh-CcHHHHHHHHHh-----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC-CC----ccCCCCCCC
Confidence 34667777776 666655555432 3445666777777776643 67777777777776 44 344 46777
Q ss_pred HHHHHHh----------------chhhccccCCCCcHHHHHHh
Q 041634 92 IQHETAT----------------RRLVRKIDYNGNTILHMAGI 118 (363)
Q Consensus 92 ~LH~Aa~----------------~~lin~~D~~GnT~LHlAa~ 118 (363)
|||+|+. +..+|.+|.+|.||||+|+.
T Consensus 90 pLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~ 132 (209)
T PHA02859 90 ALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMC 132 (209)
T ss_pred HHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 7776653 44556677777777777664
No 9
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.64 E-value=7.4e-16 Score=156.75 Aligned_cols=137 Identities=22% Similarity=0.123 Sum_probs=103.5
Q ss_pred CCcccccccc-ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 5 GIEDTDAKLK-INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 5 ~~~~~~~~~~-ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
|.+.+..... ++++||+|+.. |+.+. +++|.+ .+.+++.+|.+|.||||.|++.|+.++++.|++.+++ ..
T Consensus 157 gadin~~~~~~g~tpLh~A~~~-~~~~i-v~~Ll~-~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~-in---- 228 (477)
T PHA02878 157 GADINMKDRHKGNTALHYATEN-KDQRL-TELLLS-YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS-TD---- 228 (477)
T ss_pred CCCCCccCCCCCCCHHHHHHhC-CCHHH-HHHHHH-CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CC----
Confidence 5555555555 88999999987 87774 455554 3567888999999999999999999999999999988 54
Q ss_pred ccCCCCCcHHHHHHh--------------chhhccccC-CCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhh
Q 041634 84 RQNKAGNTIQHETAT--------------RRLVRKIDY-NGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSV 148 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~--------------~~lin~~D~-~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~ 148 (363)
.+|..|+||||+|+. +..+|.+|. .|+||||+|+. +.+++ +++....+
T Consensus 229 ~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~~--~~~~v------------~~Ll~~ga--- 291 (477)
T PHA02878 229 ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIK--SERKL------------KLLLEYGA--- 291 (477)
T ss_pred CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHcc--CHHHH------------HHHHHCCC---
Confidence 689999999999995 455677775 79999999943 22221 11111122
Q ss_pred ccccccccCCCCCCCHHHHHHH
Q 041634 149 TMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 149 ~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
..+..|++|+||++++.+
T Consensus 292 ----din~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 292 ----DINSLNSYKLTPLSSAVK 309 (477)
T ss_pred ----CCCCcCCCCCCHHHHHHH
Confidence 367889999999999875
No 10
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.4e-15 Score=161.12 Aligned_cols=162 Identities=18% Similarity=0.083 Sum_probs=121.1
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcC-cHHHHHHHHHhCCCCchhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTK-KSDLVIKLLDELPDQSLDKM 82 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G-~~eiV~~LL~~~p~~~~~~~ 82 (363)
.|.+.+.....++++||+|+.. ++...+++++.+ .+.+++.+|.+|.||||+|+..| +.++++.|++.+++ ..
T Consensus 262 ~g~~vn~~d~~g~TpLh~Aa~~-~~~~~iv~lLl~-~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad-in--- 335 (682)
T PHA02876 262 AGFSVNSIDDCKNTPLHHASQA-PSLSRLVPKLLE-RGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-VN--- 335 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHhC-CCHHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC-CC---
Confidence 3455555566788999999998 888778888887 46778889999999999999999 59999999999988 54
Q ss_pred hccCCCCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhh
Q 041634 83 TRQNKAGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLL 135 (363)
Q Consensus 83 ~~~d~~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l 135 (363)
.+|..|+||||+|+. +..+|.+|.+|+||||+|+..++.++++.+ +++++..
T Consensus 336 -~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~ 414 (682)
T PHA02876 336 -AADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHF 414 (682)
T ss_pred -CcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHH
Confidence 689999999999986 466799999999999999999887665322 2233333
Q ss_pred HHHHHH-HHHhhhhcc-ccccccCCCCCCCHHHHHHHhc
Q 041634 136 RDELLW-YERVKSVTM-AHFLNHGNNMGFTPEELFATAN 172 (363)
Q Consensus 136 ~~~l~~-~~~V~~~~~-~~~~~~~N~~G~Tp~dl~~~~~ 172 (363)
...-.- ...++.... ....+.+|++|+||++++.+.+
T Consensus 415 A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 415 ALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred HHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 211000 111221111 1246789999999999997643
No 11
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.63 E-value=4.9e-16 Score=159.19 Aligned_cols=112 Identities=21% Similarity=0.028 Sum_probs=91.4
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCccc-------------ccCcCCCcHHhHHHhcCcHHHHHHHHHhCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALY-------------VFTIHDDTVLLMATYTKKSDLVIKLLDELP 75 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~-------------~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p 75 (363)
+..++.++++||.|+.. ||.+.+..+|......+.. ..|++|+||||+||+.|+.+.|+.|+..+.
T Consensus 219 n~~~n~~~~pLhlAve~-g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga 297 (929)
T KOG0510|consen 219 NFDNNEKATPLHLAVEG-GDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGA 297 (929)
T ss_pred ccccCCCCcchhhhhhc-CCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCC
Confidence 34556788999999987 8888776666653322211 248899999999999999999999999999
Q ss_pred CCchhhhhccCCCCCcHHHHHHh---------------chhhccccCCCCcHHHHHHhhCcccCcc
Q 041634 76 DQSLDKMTRQNKAGNTIQHETAT---------------RRLVRKIDYNGNTILHMAGIKIKDYGSE 126 (363)
Q Consensus 76 ~~~~~~~~~~d~~G~t~LH~Aa~---------------~~lin~~D~~GnT~LHlAa~~~~~~~~~ 126 (363)
+ +. .+++++.||||.||. .++.|..|-.|+||||+|++.||..+++
T Consensus 298 ~-I~----~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~q 358 (929)
T KOG0510|consen 298 S-IN----SKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQ 358 (929)
T ss_pred c-cc----ccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHH
Confidence 8 65 789999999999998 3577889999999999999999987763
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2.5e-15 Score=151.04 Aligned_cols=137 Identities=13% Similarity=-0.028 Sum_probs=99.2
Q ss_pred CChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh--------
Q 041634 27 KDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------- 98 (363)
Q Consensus 27 g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------- 98 (363)
.+.+ +++.+.+ .+.+++.+|.+|.||||.|+..|+.++|+.|++.+++ .. .+|..|+||||+|+.
T Consensus 102 ~~~~-~i~~ll~-~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n----~~d~~g~tpLh~A~~~~~~~iv~ 174 (434)
T PHA02874 102 IEKD-MIKTILD-CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VN----IEDDNGCYPIHIAIKHNFFDIIK 174 (434)
T ss_pred CCHH-HHHHHHH-CcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CC----CcCCCCCCHHHHHHHCCcHHHHH
Confidence 4444 4455555 3677888999999999999999999999999999998 54 689999999999998
Q ss_pred -----chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 99 -----RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 99 -----~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
+..++.+|.+|+||||+|+..|+.++++.+ +.+++.+.-. ...+.++........+.+|.+
T Consensus 175 ~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~-~~~~~i~~Ll~~~~in~~d~~ 253 (434)
T PHA02874 175 LLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAII-HNRSAIELLINNASINDQDID 253 (434)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHH-CChHHHHHHHcCCCCCCcCCC
Confidence 456688999999999999999887665322 2233332211 011222222223346778889
Q ss_pred CCCHHHHHHHh
Q 041634 161 GFTPEELFATA 171 (363)
Q Consensus 161 G~Tp~dl~~~~ 171 (363)
|.||++.+...
T Consensus 254 G~TpLh~A~~~ 264 (434)
T PHA02874 254 GSTPLHHAINP 264 (434)
T ss_pred CCCHHHHHHhc
Confidence 99999988753
No 13
>PHA03095 ankyrin-like protein; Provisional
Probab=99.63 E-value=3.5e-15 Score=150.82 Aligned_cols=86 Identities=16% Similarity=0.054 Sum_probs=40.3
Q ss_pred CCccccccccccHHHHHHHHccC--ChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcC-cHHHHHHHHHhCCCCchhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKK--DEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTK-KSDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g--~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G-~~eiV~~LL~~~p~~~~~~ 81 (363)
|.+.+.....++++||.|+.. + +..+++++|.+ .+.+++.+|.+|.||||.|+..| +.++++.|++++++ ..
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~-~~~~~~~iv~~Ll~-~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~-in-- 111 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHY-SSEKVKDIVRLLLE-AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD-VN-- 111 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHh-cCCChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCC-CC--
Confidence 334444444445555555544 3 12333333333 23444455555555555555555 35555555555544 22
Q ss_pred hhccCCCCCcHHHHHH
Q 041634 82 MTRQNKAGNTIQHETA 97 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa 97 (363)
.+|..|+||||+|+
T Consensus 112 --~~~~~g~tpLh~a~ 125 (471)
T PHA03095 112 --AKDKVGRTPLHVYL 125 (471)
T ss_pred --CCCCCCCCHHHHHh
Confidence 34555555555555
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.63 E-value=1.8e-15 Score=150.87 Aligned_cols=141 Identities=21% Similarity=0.040 Sum_probs=88.8
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.....+.++||.|+.. |+.+ ++++|.+. +...+..+.+|.||||.|++.|+.++|+.|++.+++ ..+ .
T Consensus 25 g~~~n~~~~~g~tpL~~A~~~-~~~~-~v~~Ll~~-ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~---~ 97 (413)
T PHA02875 25 GINPNFEIYDGISPIKLAMKF-RDSE-AIKLLMKH-GAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKF-ADD---V 97 (413)
T ss_pred CCCCCccCCCCCCHHHHHHHc-CCHH-HHHHHHhC-CCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCc-ccc---c
Confidence 444444455567777777776 6655 44444442 334555566677777777777777777777777766 443 5
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMA 151 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~ 151 (363)
.+.+|+||||+|+. +..++.+|.+|+||||+|+..|+.+.+ ++.+.. .
T Consensus 98 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v------------~~Ll~~-------g 158 (413)
T PHA02875 98 FYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGI------------ELLIDH-------K 158 (413)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHhc-------C
Confidence 56677777777776 445567777777777777777654332 111111 1
Q ss_pred cccccCCCCCCCHHHHHHHh
Q 041634 152 HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 152 ~~~~~~N~~G~Tp~dl~~~~ 171 (363)
...+.+|..|.||++++...
T Consensus 159 ~~~~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 159 ACLDIEDCCGCTPLIIAMAK 178 (413)
T ss_pred CCCCCCCCCCCCHHHHHHHc
Confidence 12467788888888887653
No 15
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.62 E-value=1.5e-15 Score=160.94 Aligned_cols=140 Identities=17% Similarity=0.000 Sum_probs=104.6
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.....+.++||+|+.. +...++++++.+ .+.+++.+|.+|.||||+|+..|+.++++.|++.+++ .. .
T Consensus 331 gadin~~d~~g~TpLh~A~~~-~~~~~iv~lLl~-~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~----~ 403 (682)
T PHA02876 331 GADVNAADRLYITPLHQASTL-DRNKDIVITLLE-LGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IE----A 403 (682)
T ss_pred CCCCCCcccCCCcHHHHHHHh-CCcHHHHHHHHH-cCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cc----c
Confidence 334444555667788888876 555666776666 4677888899999999999999999999999999988 44 5
Q ss_pred cCCCCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCc-ccCccccCCchhhhHHHHHHHHHhhhhc
Q 041634 85 QNKAGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIK-DYGSEKMEGPALLLRDELLWYERVKSVT 149 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~-~~~~~~~~~~al~l~~~l~~~~~V~~~~ 149 (363)
.|..|+||||+|+. +..+|.+|.+|+||||+|++.+. .+++ +++....+
T Consensus 404 ~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv------------~lLl~~Ga---- 467 (682)
T PHA02876 404 LSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVI------------EMLLDNGA---- 467 (682)
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHH------------HHHHHCCC----
Confidence 78899999999975 45678899999999999998763 2222 11111122
Q ss_pred cccccccCCCCCCCHHHHHHH
Q 041634 150 MAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 150 ~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
..+.+|..|.||..++.+
T Consensus 468 ---d~n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 468 ---DVNAINIQNQYPLLIALE 485 (682)
T ss_pred ---CCCCCCCCCCCHHHHHHH
Confidence 367899999999998764
No 16
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=5.1e-16 Score=159.06 Aligned_cols=111 Identities=21% Similarity=0.160 Sum_probs=91.5
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
++.+.+++++||+|+.+ |+.+.+..++.. +.+++.++.++.||||.||..|+.+.|+.||+ -+| .. ++...|-.
T Consensus 267 ~~~d~dg~tpLH~a~r~-G~~~svd~Ll~~--Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~-~r-llne~D~~ 340 (929)
T KOG0510|consen 267 NDEDNDGCTPLHYAARQ-GGPESVDNLLGF--GASINSKNKDEESPLHFAAIYGRINTVERLLQ-ESD-TR-LLNESDLH 340 (929)
T ss_pred hcccccCCchHHHHHHc-CChhHHHHHHHc--CCcccccCCCCCCchHHHHHcccHHHHHHHHh-CcC-cc-cccccccc
Confidence 45567789999999998 988855555443 77889999999999999999999999999999 455 32 44468899
Q ss_pred CCcHHHHHHh-------------chhhc---cccCCCCcHHHHHHhhCcccCc
Q 041634 89 GNTIQHETAT-------------RRLVR---KIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 89 G~t~LH~Aa~-------------~~lin---~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|+||||.|+. +++.. ..|.+||||||+||+.|+...+
T Consensus 341 g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av 393 (929)
T KOG0510|consen 341 GMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAV 393 (929)
T ss_pred CCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHH
Confidence 9999999998 34443 5699999999999999988766
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=99.61 E-value=3e-15 Score=142.40 Aligned_cols=105 Identities=17% Similarity=0.036 Sum_probs=74.2
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
....++++||+|+.. |+.+.+ ++|.+. +.+.+.. +|.||||.|+..|+.++|+.|++.+++ .. .+|..|+
T Consensus 26 ~D~~G~TpLh~Aa~~-g~~eiv-~~Ll~~-ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gad-vn----~~d~~G~ 95 (284)
T PHA02791 26 ADVHGHSALYYAIAD-NNVRLV-CTLLNA-GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGMD-DS----QFDDKGN 95 (284)
T ss_pred CCCCCCcHHHHHHHc-CCHHHH-HHHHHC-cCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCC-CC----CCCCCCC
Confidence 344577888888887 766644 444442 3333433 467888888888888888888888877 43 5788888
Q ss_pred cHHHHHHh-------------chhhccccCCC-CcHHHHHHhhCcccCc
Q 041634 91 TIQHETAT-------------RRLVRKIDYNG-NTILHMAGIKIKDYGS 125 (363)
Q Consensus 91 t~LH~Aa~-------------~~lin~~D~~G-nT~LHlAa~~~~~~~~ 125 (363)
||||+|+. +..++.+|++| +||||+|+..++.+++
T Consensus 96 TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eiv 144 (284)
T PHA02791 96 TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIV 144 (284)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHH
Confidence 88888887 34556677777 4788888888776554
No 18
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.61 E-value=3.6e-15 Score=148.70 Aligned_cols=114 Identities=26% Similarity=0.097 Sum_probs=92.1
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.......++||.|+.. |+.+.+..++.. +....+..+.+|.||||.|+..|+.++++.|++.+++ .. .
T Consensus 58 ga~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad-~~----~ 130 (413)
T PHA02875 58 GAIPDVKYPDIESELHDAVEE-GDVKAVEELLDL-GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD-PD----I 130 (413)
T ss_pred CCCccccCCCcccHHHHHHHC-CCHHHHHHHHHc-CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CC----C
Confidence 344434445677899999998 988866665544 4444455677899999999999999999999999998 44 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|..|+||||+|+. +..++.+|..|+||||+|+..|+.+++
T Consensus 131 ~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv 184 (413)
T PHA02875 131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAIC 184 (413)
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 89999999999998 456788999999999999999876543
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=99.60 E-value=2.1e-15 Score=143.46 Aligned_cols=104 Identities=13% Similarity=-0.017 Sum_probs=82.1
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC-CcHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG-NTIQ 93 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G-~t~L 93 (363)
..++||.|+.. |+.+.+ ++|.+ .+.+++.+|.+|.||||+|+..|+.++++.|++++++ .. .+|+.| +|||
T Consensus 61 ~~TpLh~Aa~~-g~~eiV-~lLL~-~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-in----~~~~~g~~TpL 132 (284)
T PHA02791 61 NEFPLHQAATL-EDTKIV-KILLF-SGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LM----FYGKTGWKTSF 132 (284)
T ss_pred CCCHHHHHHHC-CCHHHH-HHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cC----ccCCCCCcHHH
Confidence 46899999987 876654 55554 3677888999999999999999999999999999998 44 577777 4899
Q ss_pred HHHHh-------chhhc----ccc-CCCCcHHHHHHhhCcccCcc
Q 041634 94 HETAT-------RRLVR----KID-YNGNTILHMAGIKIKDYGSE 126 (363)
Q Consensus 94 H~Aa~-------~~lin----~~D-~~GnT~LHlAa~~~~~~~~~ 126 (363)
|+|+. +.++. ..| ..|+||||+|++.|+.++++
T Consensus 133 ~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~ 177 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMI 177 (284)
T ss_pred HHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHH
Confidence 99997 12222 234 35899999999999887764
No 20
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.60 E-value=3.1e-15 Score=150.38 Aligned_cols=103 Identities=19% Similarity=0.061 Sum_probs=92.2
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC-CCCCcHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTIQ 93 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d-~~G~t~L 93 (363)
.....+.|++. |+.+++.+++... ...++..|.+|.|+||+||.+++.+++++|+++++| ++ ..+ .-|.|||
T Consensus 44 ~~~~~v~A~q~-G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad-vn----~~gG~l~stPL 116 (600)
T KOG0509|consen 44 SLDDIVKATQY-GELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD-VN----AIGGVLGSTPL 116 (600)
T ss_pred hhhhhhhHhhc-chHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC-cc----ccCCCCCCCcc
Confidence 45678999998 9999999998875 778889999999999999999999999999999999 55 355 7889999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
|+|++ +++.+.+|.+|-||||+|++.++.-.
T Consensus 117 HWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~ 160 (600)
T KOG0509|consen 117 HWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTAL 160 (600)
T ss_pred hHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHH
Confidence 99998 78889999999999999999997644
No 21
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.59 E-value=4.9e-15 Score=156.22 Aligned_cols=78 Identities=14% Similarity=-0.079 Sum_probs=42.1
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc--HHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK--SDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~--~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
.+.++++||.|+.......+++++|.+ .+.+++.+|.+|.||||.|++.|+ .++|+.||+++++ +. .+|..|
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe-~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN----~kD~~G 247 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCN-NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD-MD----MKCVNG 247 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CC----CCCCCC
Confidence 344556666554220112234444444 245566666666666666666663 3666666666665 33 456666
Q ss_pred CcHHHH
Q 041634 90 NTIQHE 95 (363)
Q Consensus 90 ~t~LH~ 95 (363)
+||||+
T Consensus 248 ~TPLh~ 253 (764)
T PHA02716 248 MSPIMT 253 (764)
T ss_pred CCHHHH
Confidence 666664
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.59 E-value=6.4e-15 Score=149.90 Aligned_cols=102 Identities=19% Similarity=0.074 Sum_probs=76.4
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHh----------------------
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDE---------------------- 73 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~---------------------- 73 (363)
.+|||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+||..|+.+++++|++.
T Consensus 38 ~tPLh~A~~~-g~~e~vk~Ll~~--gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ 114 (477)
T PHA02878 38 FIPLHQAVEA-RNLDVVKSLLTR--GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV 114 (477)
T ss_pred cchHHHHHHc-CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence 3689999987 887755555543 668888999999999999988877655555543
Q ss_pred ------------------------------------------CCCCchhhhhccCCC-CCcHHHHHHh------------
Q 041634 74 ------------------------------------------LPDQSLDKMTRQNKA-GNTIQHETAT------------ 98 (363)
Q Consensus 74 ------------------------------------------~p~~~~~~~~~~d~~-G~t~LH~Aa~------------ 98 (363)
+++ +. .+|.. |+||||+|+.
T Consensus 115 ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gad-in----~~~~~~g~tpLh~A~~~~~~~iv~~Ll~ 189 (477)
T PHA02878 115 EIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD-IN----MKDRHKGNTALHYATENKDQRLTELLLS 189 (477)
T ss_pred HHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCC-CC----ccCCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence 333 22 45666 9999999997
Q ss_pred -chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 99 -RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 99 -~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+..++.+|.+|+||||+|++.++.+++
T Consensus 190 ~gad~n~~d~~g~tpLh~A~~~~~~~iv 217 (477)
T PHA02878 190 YGANVNIPDKTNNSPLHHAVKHYNKPIV 217 (477)
T ss_pred CCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 456788899999999999988876544
No 23
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.59 E-value=6e-15 Score=159.47 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=64.0
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
+..+||.|+.. |+.+.+..++.. +.+.+..|.+|.||||+||.+|+.++++.|++++++ +. .+|.+|+||||
T Consensus 525 ~~~~L~~Aa~~-g~~~~l~~Ll~~--G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in----~~d~~G~TpL~ 596 (823)
T PLN03192 525 MASNLLTVAST-GNAALLEELLKA--KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VH----IRDANGNTALW 596 (823)
T ss_pred chhHHHHHHHc-CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CC----CcCCCCCCHHH
Confidence 45789999987 888766666644 667888999999999999999999999999999888 54 68999999999
Q ss_pred HHHh
Q 041634 95 ETAT 98 (363)
Q Consensus 95 ~Aa~ 98 (363)
+|+.
T Consensus 597 ~A~~ 600 (823)
T PLN03192 597 NAIS 600 (823)
T ss_pred HHHH
Confidence 8875
No 24
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.59 E-value=4e-15 Score=130.64 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=88.7
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHH---hhcCCCCcccccCcCCCcHHhHHHhcCcHHH---HHHHHHhCCCCc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSEL---CRKVPDHALYVFTIHDDTVLLMATYTKKSDL---VIKLLDELPDQS 78 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~l---L~~~~~~~~~~~d~~G~TpLh~Aa~~G~~ei---V~~LL~~~p~~~ 78 (363)
+.+..+..++....+|+|+.. |+.+.++++ +.+ .+..++..|.+|+||||+|+..|+.+. +++|++.+++ +
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~-g~~~~l~~~~~~l~~-~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-i 86 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRT-GNIYELMEVAPFISG-DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-I 86 (166)
T ss_pred chHHhhhccCCCcHHHHHHHc-CCHHHHHHHHHHHhh-cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-C
Confidence 444444455555689999998 998766554 333 455677889999999999999998654 8999999988 5
Q ss_pred hhhhhccC-CCCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 79 LDKMTRQN-KAGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 79 ~~~~~~~d-~~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
. .+| ..|+||||+|+. +..++.+|.+|+||||+|+..++..++
T Consensus 87 n----~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv 144 (166)
T PHA02743 87 N----ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMM 144 (166)
T ss_pred C----CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHH
Confidence 5 577 589999999997 345678899999999999999875443
No 25
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.59 E-value=6.7e-15 Score=149.27 Aligned_cols=159 Identities=17% Similarity=0.012 Sum_probs=85.7
Q ss_pred CCccccccccccHHHHHHH--HccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcC--cHHHHHHHHHhCCCCchh
Q 041634 5 GIEDTDAKLKINSELYNAL--MIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTK--KSDLVIKLLDELPDQSLD 80 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~--~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G--~~eiV~~LL~~~p~~~~~ 80 (363)
|.+.+.....++++||.|+ .. |+.+.+ ++|.+ .+.+++..|.+|.||||.|+..| +.++++.|++++++ ..
T Consensus 96 ga~i~~~d~~g~tpL~~A~~~~~-~~~~iv-~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d-in- 170 (480)
T PHA03100 96 GANVNAPDNNGITPLLYAISKKS-NSYSIV-EYLLD-NGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD-IN- 170 (480)
T ss_pred CCCCCCCCCCCCchhhHHHhccc-ChHHHH-HHHHH-cCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC-cc-
Confidence 4444444455666777777 54 554433 33333 24555666666777777777777 67777777777666 33
Q ss_pred hhhccCCCCCcHHHHHHh-------------chhhccccCCC------CcHHHHHHhhCc--ccCcc-------------
Q 041634 81 KMTRQNKAGNTIQHETAT-------------RRLVRKIDYNG------NTILHMAGIKIK--DYGSE------------- 126 (363)
Q Consensus 81 ~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~G------nT~LHlAa~~~~--~~~~~------------- 126 (363)
.+|..|+||||+|+. +...+..|.+| .||||.|+..++ .++++
T Consensus 171 ---~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d 247 (480)
T PHA03100 171 ---AKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKD 247 (480)
T ss_pred ---cccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCC
Confidence 456667777777765 33344555555 556666665554 22221
Q ss_pred ccCCchhhhHHHHHHHHHhhhhcc-ccccccCCCCCCCHHHHHHHh
Q 041634 127 KMEGPALLLRDELLWYERVKSVTM-AHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 127 ~~~~~al~l~~~l~~~~~V~~~~~-~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
..+.+++.....-...+.++..+. ....+.+|.+|+||.+++.+.
T Consensus 248 ~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 248 VYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence 112223322211111111221111 113678899999999998653
No 26
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.58 E-value=1.1e-14 Score=132.72 Aligned_cols=135 Identities=12% Similarity=0.082 Sum_probs=99.6
Q ss_pred ccccccHHHHHHHHccC-ChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhc---CcHHHHHHHHHhCCCCchhhhhcc
Q 041634 11 AKLKINSELYNALMIKK-DEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYT---KKSDLVIKLLDELPDQSLDKMTRQ 85 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g-~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~---G~~eiV~~LL~~~p~~~~~~~~~~ 85 (363)
......++||+|+.. + ...+++++|.+ .+.+++.++ .+|.||||+|+.. |+.++++.|++++++ +. .+
T Consensus 47 ~~~~g~TpLh~a~~~-~~~~~eiv~~Ll~-~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad-in----~~ 119 (209)
T PHA02859 47 CNDLYETPIFSCLEK-DKVNVEILKFLIE-NGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS-IT----EE 119 (209)
T ss_pred cCccCCCHHHHHHHc-CCCCHHHHHHHHH-CCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC-CC----Cc
Confidence 344577999999975 4 23456666666 467778776 4799999998763 589999999999998 54 68
Q ss_pred CCCCCcHHHHHHh---------------chhhccccCCCCcHHHHHH-hhCcccCccccCCchhhhHHHHHHHHHhhhhc
Q 041634 86 NKAGNTIQHETAT---------------RRLVRKIDYNGNTILHMAG-IKIKDYGSEKMEGPALLLRDELLWYERVKSVT 149 (363)
Q Consensus 86 d~~G~t~LH~Aa~---------------~~lin~~D~~GnT~LHlAa-~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~ 149 (363)
|.+|+||||+|+. +..++.+|.+|+||||.++ ..++.+++ +++....+
T Consensus 120 d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv------------~~Ll~~Ga---- 183 (209)
T PHA02859 120 DEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIF------------DFLTSLGI---- 183 (209)
T ss_pred CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHH------------HHHHHcCC----
Confidence 9999999999875 4567889999999999754 44443222 11211122
Q ss_pred cccccccCCCCCCCHHHHHHHh
Q 041634 150 MAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 150 ~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
..+.+|+.|+||++++..+
T Consensus 184 ---di~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 184 ---DINETNKSGYNCYDLIKFR 202 (209)
T ss_pred ---CCCCCCCCCCCHHHHHhhh
Confidence 3678899999999997653
No 27
>PHA02798 ankyrin-like protein; Provisional
Probab=99.57 E-value=1e-14 Score=148.84 Aligned_cols=87 Identities=14% Similarity=0.057 Sum_probs=43.0
Q ss_pred CCccccccccccHHHHHHHHccCC--hHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc---HHHHHHHHHhCCCCch
Q 041634 5 GIEDTDAKLKINSELYNALMIKKD--EQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK---SDLVIKLLDELPDQSL 79 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~--~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~---~eiV~~LL~~~p~~~~ 79 (363)
|.+.+.....++++||.|+.. +. ..+++++|.+ .+.+++..|.+|.||||.|++.|+ .++++.|++.+++ +.
T Consensus 99 GadiN~~d~~G~TpLh~a~~~-~~~~~~~iv~~Ll~-~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-in 175 (489)
T PHA02798 99 GADINKKNSDGETPLYCLLSN-GYINNLEILLFMIE-NGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-IN 175 (489)
T ss_pred CCCCCCCCCCcCcHHHHHHHc-CCcChHHHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-cc
Confidence 444444444455556655543 31 2334444443 244555555556666666555555 5556666655555 33
Q ss_pred hhhhccCCCCCcHHHHHH
Q 041634 80 DKMTRQNKAGNTIQHETA 97 (363)
Q Consensus 80 ~~~~~~d~~G~t~LH~Aa 97 (363)
. ..|..|.||||.++
T Consensus 176 ~---~~~~~~~t~Lh~~~ 190 (489)
T PHA02798 176 T---HNNKEKYDTLHCYF 190 (489)
T ss_pred c---ccCcCCCcHHHHHH
Confidence 2 22334555555443
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.56 E-value=1.5e-14 Score=147.86 Aligned_cols=17 Identities=12% Similarity=-0.097 Sum_probs=10.0
Q ss_pred cccCCCCCCCHHHHHHH
Q 041634 154 LNHGNNMGFTPEELFAT 170 (363)
Q Consensus 154 ~~~~N~~G~Tp~dl~~~ 170 (363)
.+.+|++|.||++++..
T Consensus 282 in~~d~~G~TpL~~A~~ 298 (494)
T PHA02989 282 IYNVSKDGDTVLTYAIK 298 (494)
T ss_pred ccccCCCCCCHHHHHHH
Confidence 45556666666666543
No 29
>PHA02741 hypothetical protein; Provisional
Probab=99.55 E-value=1.1e-14 Score=127.97 Aligned_cols=108 Identities=11% Similarity=-0.009 Sum_probs=87.3
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcC----CCCcccccCcCCCcHHhHHHhcCc----HHHHHHHHHhCCCCchhhhh
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKV----PDHALYVFTIHDDTVLLMATYTKK----SDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~----~~~~~~~~d~~G~TpLh~Aa~~G~----~eiV~~LL~~~p~~~~~~~~ 83 (363)
.....++||+|+.. |+.+.+..++... .+.+++.+|.+|.||||+|+..|+ .++++.|++.+++ +.
T Consensus 18 ~~~g~t~Lh~Aa~~-g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in---- 91 (169)
T PHA02741 18 NSEGENFFHEAARC-GCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-IN---- 91 (169)
T ss_pred ccCCCCHHHHHHHc-CCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CC----
Confidence 34577899999998 9888666554321 245678899999999999999999 5899999999998 55
Q ss_pred ccCC-CCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 84 RQNK-AGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 84 ~~d~-~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|. .|+||||+|+. +..++.+|.+|.||||+|+..++..++
T Consensus 92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv 148 (169)
T PHA02741 92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMM 148 (169)
T ss_pred CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHH
Confidence 4674 89999999997 345677899999999999999865443
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.53 E-value=5.8e-14 Score=141.96 Aligned_cols=108 Identities=16% Similarity=-0.006 Sum_probs=56.4
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHH--hcCcHHHHHHHHHhCCCCchhhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMAT--YTKKSDLVIKLLDELPDQSLDKM 82 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa--~~G~~eiV~~LL~~~p~~~~~~~ 82 (363)
|.+.+.....+.++||+|+.. |+..+++++|.+ .+.+++.+|.+|.||||.|+ ..++.++++.|++.+++ ..
T Consensus 73 Gadin~~~~~g~TpLh~A~~~-~~~~~iv~lLl~-~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad-~~--- 146 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYN-ATTLDVIKLLIK-AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGAD-VN--- 146 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHc-CCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC-CC---
Confidence 334444444555566666655 543444444444 24455555555666666665 34455566666665555 33
Q ss_pred hccCCCCCcHHHHHHh---------------chhhccccCCCCcHHHHHHhh
Q 041634 83 TRQNKAGNTIQHETAT---------------RRLVRKIDYNGNTILHMAGIK 119 (363)
Q Consensus 83 ~~~d~~G~t~LH~Aa~---------------~~lin~~D~~GnT~LHlAa~~ 119 (363)
.+|..|+||||+|+. +..++.+|.+|+||||.|+..
T Consensus 147 -~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~ 197 (471)
T PHA03095 147 -ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQS 197 (471)
T ss_pred -ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHH
Confidence 355566666665554 222334455566666665554
No 31
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.51 E-value=7.4e-14 Score=147.37 Aligned_cols=85 Identities=14% Similarity=-0.115 Sum_probs=67.6
Q ss_pred CChHHHHHHhhcCCCCccccc-CcCCCcHHhHHHh--cCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-----
Q 041634 27 KDEQKVSELCRKVPDHALYVF-TIHDDTVLLMATY--TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT----- 98 (363)
Q Consensus 27 g~~~~v~~lL~~~~~~~~~~~-d~~G~TpLh~Aa~--~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~----- 98 (363)
++.+ ++++|.+.+..+++.. |.+|.||||.|+. .|+.+++++|++.+++ +. .+|.+|+||||+|++
T Consensus 153 v~le-iVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-VN----~kD~~G~TPLH~Aa~~g~~~ 226 (764)
T PHA02716 153 IDLD-LIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN-VN----LQNNHLITPLHTYLITGNVC 226 (764)
T ss_pred CCHH-HHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-CC----CCCCCCCCHHHHHHHcCCCC
Confidence 5555 5555555443678877 8889999998865 4678999999999988 55 589999999999986
Q ss_pred ----------chhhccccCCCCcHHHHHH
Q 041634 99 ----------RRLVRKIDYNGNTILHMAG 117 (363)
Q Consensus 99 ----------~~lin~~D~~GnT~LHlAa 117 (363)
++.+|.+|.+|+||||.|+
T Consensus 227 ~eIVklLLe~GADVN~kD~~G~TPLh~Ai 255 (764)
T PHA02716 227 ASVIKKIIELGGDMDMKCVNGMSPIMTYI 255 (764)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 4567889999999999875
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.51 E-value=9.3e-14 Score=140.36 Aligned_cols=103 Identities=16% Similarity=-0.013 Sum_probs=80.2
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHH
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHE 95 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~ 95 (363)
...||.++...+...++++.|++ .+.+++.+|.+|.||||+||+.|+.++|+.||+++++ +. .+|.+|+||||+
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in----~~d~~g~TpLh~ 111 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLH-RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD-PN----ACDKQHKTPLYY 111 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHH-CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CC----CCCCCCCCHHHH
Confidence 36788766432444556777666 4678899999999999999999999999999999998 55 689999999999
Q ss_pred HHh---------------chhhc-cccCCCCcHHHHHHhhCcccCc
Q 041634 96 TAT---------------RRLVR-KIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 96 Aa~---------------~~lin-~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|+. +..+| ..|.+|.|||| |+..++.+++
T Consensus 112 A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv 156 (446)
T PHA02946 112 LSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVF 156 (446)
T ss_pred HHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHH
Confidence 875 33445 46999999998 5545555443
No 33
>PHA02741 hypothetical protein; Provisional
Probab=99.51 E-value=6.8e-14 Score=123.03 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=83.8
Q ss_pred cccCcCCCcHHhHHHhcCcHHHHHHHHHhC------CCCchhhhhccCCCCCcHHHHHHh-----------------chh
Q 041634 45 YVFTIHDDTVLLMATYTKKSDLVIKLLDEL------PDQSLDKMTRQNKAGNTIQHETAT-----------------RRL 101 (363)
Q Consensus 45 ~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~------p~~~~~~~~~~d~~G~t~LH~Aa~-----------------~~l 101 (363)
..+|.+|.||||.||+.|+.++++.|+... .+ .+ .+|..|+||||+|+. +..
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~--in---~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad 89 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA--LN---ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD 89 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh--hh---ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence 456788999999999999999999987542 22 23 789999999999997 345
Q ss_pred hccccC-CCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHhc-HHHHHhh
Q 041634 102 VRKIDY-NGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATAN-NELRAQS 179 (363)
Q Consensus 102 in~~D~-~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~~-~~l~~~~ 179 (363)
+|.+|. +|+||||+|++.++.+++ +++... +....+.+|.+|+||++++.... .++.+..
T Consensus 90 in~~~~~~g~TpLh~A~~~~~~~iv------------~~Ll~~------~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L 151 (169)
T PHA02741 90 INAQEMLEGDTALHLAAHRRDHDLA------------EWLCCQ------PGIDLHFCNADNKSPFELAIDNEDVAMMQIL 151 (169)
T ss_pred CCCCCcCCCCCHHHHHHHcCCHHHH------------HHHHhC------CCCCCCcCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 678885 999999999999876543 111110 11235788999999999987644 3444444
Q ss_pred HHH
Q 041634 180 KEW 182 (363)
Q Consensus 180 ~~~ 182 (363)
.++
T Consensus 152 ~~~ 154 (169)
T PHA02741 152 REI 154 (169)
T ss_pred HHH
Confidence 333
No 34
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.50 E-value=9.4e-14 Score=140.86 Aligned_cols=160 Identities=18% Similarity=0.058 Sum_probs=116.1
Q ss_pred CCCccccccccccHHHHH-----HHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHH--hcCcHHHHHHHHHhCCC
Q 041634 4 IGIEDTDAKLKINSELYN-----ALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMAT--YTKKSDLVIKLLDELPD 76 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~-----A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa--~~G~~eiV~~LL~~~p~ 76 (363)
.|.+.+.......++||. |+.. ++.+ ++++|.+ .+.+++..|.+|.||||.|+ ..|+.++++.|++.+++
T Consensus 57 ~g~~~~~~~~~~~t~L~~~~~~~a~~~-~~~~-iv~~Ll~-~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~ 133 (480)
T PHA03100 57 NGADINSSTKNNSTPLHYLSNIKYNLT-DVKE-IVKLLLE-YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN 133 (480)
T ss_pred cCCCCCCccccCcCHHHHHHHHHHHhh-chHH-HHHHHHH-CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCC
Confidence 356666666667899999 9987 7666 5556555 35566889999999999999 99999999999999998
Q ss_pred CchhhhhccCCCCCcHHHHHHh---------------chhhccccCCCCcHHHHHHhhCcccCcccc--C----------
Q 041634 77 QSLDKMTRQNKAGNTIQHETAT---------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM--E---------- 129 (363)
Q Consensus 77 ~~~~~~~~~d~~G~t~LH~Aa~---------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~--~---------- 129 (363)
.. .+|..|+||||+|+. +..++.+|.+|+||||+|+..|+.++++.+ .
T Consensus 134 -~~----~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 208 (480)
T PHA03100 134 -VN----IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIE 208 (480)
T ss_pred -CC----ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCC
Confidence 44 589999999999996 445688999999999999999877665322 1
Q ss_pred -------CchhhhHHHHHH--HHHhhhhccc-cccccCCCCCCCHHHHHHHh
Q 041634 130 -------GPALLLRDELLW--YERVKSVTMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 130 -------~~al~l~~~l~~--~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
..++.......- .+.++..+.. ...+.+|..|.||++.+...
T Consensus 209 ~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~ 260 (480)
T PHA03100 209 TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYN 260 (480)
T ss_pred CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 112221111111 1222222222 24578899999999998764
No 35
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.49 E-value=2.8e-14 Score=123.25 Aligned_cols=107 Identities=11% Similarity=-0.001 Sum_probs=81.1
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhc---CCCCcccccCcCCCcHHhHHHhcCcH---HHHHHHHHhCCCCchhhhhccC
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRK---VPDHALYVFTIHDDTVLLMATYTKKS---DLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~---~~~~~~~~~d~~G~TpLh~Aa~~G~~---eiV~~LL~~~p~~~~~~~~~~d 86 (363)
..+.++||+|+.. |+..++...... .....+...|.+|.||||+|+..|+. ++++.|++.+++ +. .+|
T Consensus 15 ~~g~tpLh~A~~~-g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in----~~~ 88 (154)
T PHA02736 15 IEGENILHYLCRN-GGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-IN----GKE 88 (154)
T ss_pred CCCCCHHHHHHHh-CCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-cc----ccC
Confidence 4578999999998 874333222111 11123456789999999999999987 468899999998 55 466
Q ss_pred -CCCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 87 -KAGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 87 -~~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
..|+||||+|+. +..++.+|..|.||||+|+..++.+++
T Consensus 89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~ 142 (154)
T PHA02736 89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMM 142 (154)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHH
Confidence 599999999997 346678999999999999998875443
No 36
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.47 E-value=1.8e-14 Score=132.68 Aligned_cols=117 Identities=25% Similarity=0.166 Sum_probs=88.1
Q ss_pred HHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------ch
Q 041634 34 ELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RR 100 (363)
Q Consensus 34 ~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~ 100 (363)
++.++..+.+.+.-|..|.+|||+||+.||..+|+.||.+++. ++ ..|....||||+|+. ++
T Consensus 17 rlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar-vn----~tnmgddtplhlaaahghrdivqkll~~ka 91 (448)
T KOG0195|consen 17 RLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VN----STNMGDDTPLHLAAAHGHRDIVQKLLSRKA 91 (448)
T ss_pred EEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cc----cccCCCCcchhhhhhcccHHHHHHHHHHhc
Confidence 3444556677888888899999999999999999999998887 44 467777899999886 56
Q ss_pred hhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHhcHH
Q 041634 101 LVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATANNE 174 (363)
Q Consensus 101 lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~~~~ 174 (363)
++|+.+..||||||+|+..|.+.+.| +|.-. ...++..|++|.||.|.++-.-++
T Consensus 92 dvnavnehgntplhyacfwgydqiae-----------dli~~--------ga~v~icnk~g~tpldkakp~l~~ 146 (448)
T KOG0195|consen 92 DVNAVNEHGNTPLHYACFWGYDQIAE-----------DLISC--------GAAVNICNKKGMTPLDKAKPMLKN 146 (448)
T ss_pred ccchhhccCCCchhhhhhhcHHHHHH-----------HHHhc--------cceeeecccCCCCchhhhchHHHH
Confidence 78999999999999999998654432 11111 112578899999999987654333
No 37
>PHA02795 ankyrin-like protein; Provisional
Probab=99.46 E-value=2.5e-13 Score=135.02 Aligned_cols=137 Identities=14% Similarity=-0.005 Sum_probs=102.7
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhcc----
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQ---- 85 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~---- 85 (363)
..++..+++||+++...++..+++++|.+ .+++++. .++.||||.|+..|+.++++.|++++++ ..+ ..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~-~GADIn~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~-~~n---~~~~~l 183 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVD-HGAVIYK--IECLNAYFRGICKKESSVVEFILNCGIP-DEN---DVKLDL 183 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHH-CCCCCCC--CCCCCHHHHHHHcCcHHHHHHHHhcCCc-ccc---cccchh
Confidence 45666889999999832344456666666 4666665 3568999999999999999999999975 332 22
Q ss_pred -CCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccc
Q 041634 86 -NKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMA 151 (363)
Q Consensus 86 -d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~ 151 (363)
+..|.+++|.|++ ++.+|.+|.+|+||||+|+..|+.+++ +++....+
T Consensus 184 ~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiV------------elLL~~GA------ 245 (437)
T PHA02795 184 YKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLV------------SWLLENGA------ 245 (437)
T ss_pred hhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHH------------HHHHHCCC------
Confidence 2457889998887 678899999999999999999986554 22222222
Q ss_pred cccccCCCCCCCHHHHHHHhc
Q 041634 152 HFLNHGNNMGFTPEELFATAN 172 (363)
Q Consensus 152 ~~~~~~N~~G~Tp~dl~~~~~ 172 (363)
..+.+|++|.||++++....
T Consensus 246 -dIN~~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 246 -NVNAVMSNGYTCLDVAVDRG 265 (437)
T ss_pred -CCCCcCCCCCCHHHHHHHcC
Confidence 26788999999999987654
No 38
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.46 E-value=3.3e-13 Score=128.91 Aligned_cols=107 Identities=13% Similarity=0.005 Sum_probs=84.6
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCccccc----CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVF----TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~----d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
.+.+.+++||.|+.. |+.+ ++++|.+ .+.+++.+ |.+|.||||.|++.|+.++++.|+++++| +.. ..+
T Consensus 29 d~~~~~~lL~~A~~~-~~~e-ivk~LL~-~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~---~~~ 101 (300)
T PHA02884 29 NKICIANILYSSIKF-HYTD-IIDAILK-LGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNR---YAE 101 (300)
T ss_pred CcCCCCHHHHHHHHc-CCHH-HHHHHHH-CCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCc---ccC
Confidence 344566788888876 7766 5555555 35567765 46899999999999999999999999999 542 235
Q ss_pred CCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 87 KAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 87 ~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
..|+||||+|+. +..++.+|.+|.||||+|++.++..+
T Consensus 102 ~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~ 152 (300)
T PHA02884 102 EAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFL 152 (300)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhH
Confidence 689999999996 67789999999999999998775543
No 39
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.44 E-value=1.1e-13 Score=134.87 Aligned_cols=129 Identities=22% Similarity=0.129 Sum_probs=101.9
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
++-.+||.|+-. |+.+ |+++|.+. +.+++..+....|||.-||..|+.|+|++|+++++| .+ ..|+.|+|.|
T Consensus 83 egappLWaAsaA-GHl~-vVk~L~~~-ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad--~~---IanrhGhTcL 154 (615)
T KOG0508|consen 83 EGAPPLWAASAA-GHLE-VVKLLLRR-GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGAD--PE---IANRHGHTCL 154 (615)
T ss_pred CCCchhhHHhcc-CcHH-HHHHHHHh-cCccccccccCCccHHHHHhcchhHHHHHHHHcCCC--Cc---ccccCCCeeE
Confidence 355789999976 7777 56666663 488888888899999999999999999999999998 34 7899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. ++++|.++..|||+||.++..|+.++++. |. .....-.+|..
T Consensus 155 mIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~-----------Ll---------~~ga~i~~d~~ 214 (615)
T KOG0508|consen 155 MIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQL-----------LL---------KHGAKIDVDGH 214 (615)
T ss_pred EeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHH-----------HH---------hCCceeeecCC
Confidence 99997 78899999999999999999998766511 10 11112356777
Q ss_pred CCCHHHHHHH
Q 041634 161 GFTPEELFAT 170 (363)
Q Consensus 161 G~Tp~dl~~~ 170 (363)
|.||+-.+..
T Consensus 215 GmtPL~~Aa~ 224 (615)
T KOG0508|consen 215 GMTPLLLAAV 224 (615)
T ss_pred CCchHHHHhh
Confidence 8999777653
No 40
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.38 E-value=5.9e-13 Score=142.62 Aligned_cols=117 Identities=18% Similarity=0.110 Sum_probs=74.4
Q ss_pred cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh----------ccCCCCCcHHHHHHh-------------chhhccc
Q 041634 49 IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT----------RQNKAGNTIQHETAT-------------RRLVRKI 105 (363)
Q Consensus 49 ~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~----------~~d~~G~t~LH~Aa~-------------~~lin~~ 105 (363)
..|.||||+||.+|+.++|+.|++++++ +..... .....|+||||.|+. ++++|.+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAd-v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGAS-VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCC-CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 3599999999999999999999999988 431000 011369999999996 5678999
Q ss_pred cCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcc-ccccccCCCCCCCHHHHHHH
Q 041634 106 DYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTM-AHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 106 D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~-~~~~~~~N~~G~Tp~dl~~~ 170 (363)
|..||||||+|+..+..... .. .-..++.+.+. ........ ....+..|++|.||++++.+
T Consensus 205 d~~g~T~Lh~A~~~~~~~~~-~~-~l~~~~~~~l~--~ll~~~~~~~el~~i~N~~g~TPL~~A~~ 266 (743)
T TIGR00870 205 DSLGNTLLHLLVMENEFKAE-YE-ELSCQMYNFAL--SLLDKLRDSKELEVILNHQGLTPLKLAAK 266 (743)
T ss_pred hhhhhHHHHHHHhhhhhhHH-HH-HHHHHHHHHHH--HHHhccCChHhhhhhcCCCCCCchhhhhh
Confidence 99999999999987621100 00 00001111000 00011111 11226789999999998765
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.38 E-value=9.7e-13 Score=142.04 Aligned_cols=140 Identities=22% Similarity=0.045 Sum_probs=106.3
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
+...+++-++||.|... +....+..++. .+.+++.++.+|.||||.|+..|++++|++||++++| +. .+|+.
T Consensus 501 ~~~~~~~l~~lhla~~~-~~v~~~~~l~~--~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd-v~----ak~~~ 572 (1143)
T KOG4177|consen 501 NLDAKKGLTPLHLAADE-DTVKVAKILLE--HGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD-VN----AKDKL 572 (1143)
T ss_pred Cccchhccchhhhhhhh-hhHHHHHHHhh--cCCceehhcccccchHHHHHhcCCchHHHHhhhCCcc-cc----ccCCC
Confidence 33445566788888876 66664444443 3778889999999999999999999999999999999 66 58899
Q ss_pred CCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccc
Q 041634 89 GNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLN 155 (363)
Q Consensus 89 G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~ 155 (363)
|+||||.|+. ++.+|..|.+|+||||.|+..|+.++++.+ ....... ......
T Consensus 573 G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l------------~~~~~~~--~~~~~~ 638 (1143)
T KOG4177|consen 573 GYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLL------------KVVTATP--AATDPV 638 (1143)
T ss_pred CCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHH------------HhccCcc--ccccch
Confidence 9999999997 778999999999999999999987765211 0000000 001134
Q ss_pred cCCCCCCCHHHHHHH
Q 041634 156 HGNNMGFTPEELFAT 170 (363)
Q Consensus 156 ~~N~~G~Tp~dl~~~ 170 (363)
..|..|.+|.++.++
T Consensus 639 ~e~~~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 639 KENRKGAVPEDVAEE 653 (1143)
T ss_pred hhhhcccChhhHHHH
Confidence 667889999888664
No 42
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.38 E-value=3.5e-13 Score=116.40 Aligned_cols=108 Identities=16% Similarity=0.013 Sum_probs=73.2
Q ss_pred ccccCcCCCcHHhHHHhcCcHHHHHHHHHh--CCCCchhhhhccCCCCCcHHHHHHh----------------chhhccc
Q 041634 44 LYVFTIHDDTVLLMATYTKKSDLVIKLLDE--LPDQSLDKMTRQNKAGNTIQHETAT----------------RRLVRKI 105 (363)
Q Consensus 44 ~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~--~p~~~~~~~~~~d~~G~t~LH~Aa~----------------~~lin~~ 105 (363)
.+.+|.+|.||||+|++.|+. ++.+... ..+....++..+|++|+||||+|+. +..+|.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 346788899999999999984 2332221 1110010223679999999999986 4456788
Q ss_pred c-CCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 106 D-YNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 106 D-~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
| .+|+||||+|++.++.+++ +.++.+ .....+.+|+.|+||++++...
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~------------~~Ll~~------~g~d~n~~~~~g~tpL~~A~~~ 136 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELA------------TWLCNQ------PGVNMEILNYAFKTPYYVACER 136 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHH------------HHHHhC------CCCCCccccCCCCCHHHHHHHc
Confidence 8 5999999999999875443 111110 0112578899999999998764
No 43
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.35 E-value=3.8e-12 Score=130.18 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=56.1
Q ss_pred ccHHHHHHHHccCC-----hHHHHHHhhcCCCCcccccCcCCCcHHhHHHhc---CcHHHHHHHHHhCCCCchhhhhccC
Q 041634 15 INSELYNALMIKKD-----EQKVSELCRKVPDHALYVFTIHDDTVLLMATYT---KKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 15 ln~~Lh~A~~~~g~-----~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~---G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
..++||.|+.. ++ ..+++++|++ .+.+++.+|.+|.||||.|+.. |+.++|+.|+++++| ..+ .+|
T Consensus 69 ~~tpL~~a~~~-~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gad-in~---~~d 142 (494)
T PHA02989 69 IETPLCAVLRN-REITSNKIKKIVKLLLK-FGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGIN-VND---VKN 142 (494)
T ss_pred CCCcHHHHHhc-cCcchhhHHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCC-ccc---ccC
Confidence 35666665543 21 2345555555 3455666666666666665543 456666666666666 423 456
Q ss_pred CCCCcHHHHHHh---------------chhhcc-ccCCCCcHHHHHHhhC
Q 041634 87 KAGNTIQHETAT---------------RRLVRK-IDYNGNTILHMAGIKI 120 (363)
Q Consensus 87 ~~G~t~LH~Aa~---------------~~lin~-~D~~GnT~LHlAa~~~ 120 (363)
..|+||||+|+. +..++. .|..|.||||.|++.+
T Consensus 143 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~ 192 (494)
T PHA02989 143 SRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRND 192 (494)
T ss_pred CCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcc
Confidence 666666666653 233344 4556666666665543
No 44
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.35 E-value=1.6e-12 Score=128.56 Aligned_cols=139 Identities=19% Similarity=0.131 Sum_probs=100.4
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchh--------
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLD-------- 80 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~-------- 80 (363)
+-...+++++||.++.. .+.+ ++.++++ .+.+++..|.+|+||||.|+.-||..++++|++++++ ...
T Consensus 67 ~~~n~DglTalhq~~id-~~~e-~v~~l~e-~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~-~~avNsdg~~P 142 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACID-DNLE-MVKFLVE-NGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGAN-LLAVNSDGNMP 142 (527)
T ss_pred cccCCccchhHHHHHhc-ccHH-HHHHHHH-hcCCccccccccCCcchhhcccccHHHHHHHHHhhhh-hhhccCCCCCc
Confidence 45567789999999986 6655 5555555 4788999999999999999999999999999998876 221
Q ss_pred -----------------------------------------------hhhccCCCCCcHHHHHHh-------------ch
Q 041634 81 -----------------------------------------------KMTRQNKAGNTIQHETAT-------------RR 100 (363)
Q Consensus 81 -----------------------------------------------~~~~~d~~G~t~LH~Aa~-------------~~ 100 (363)
.....+.+|.|.||+|+. +.
T Consensus 143 ~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~ 222 (527)
T KOG0505|consen 143 YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY 222 (527)
T ss_pred cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence 112334447777777765 44
Q ss_pred hhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 101 LVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 101 lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
.++.+|.+|.||||.||..|+.+.. +++..... ..+.++..|+||.|++.+
T Consensus 223 ~~~~~D~dgWtPlHAAA~Wg~~~~~------------elL~~~ga-------~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 223 SVNIKDYDGWTPLHAAAHWGQEDAC------------ELLVEHGA-------DMDAKTKMGETPLDVADE 273 (527)
T ss_pred CcccccccCCCcccHHHHhhhHhHH------------HHHHHhhc-------ccchhhhcCCCCccchhh
Confidence 5677888888888888887764322 12222221 257888999999999876
No 45
>PHA02798 ankyrin-like protein; Provisional
Probab=99.34 E-value=4.5e-12 Score=129.48 Aligned_cols=101 Identities=16% Similarity=0.043 Sum_probs=81.9
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhc-----CcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYT-----KKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~-----G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
.++.++.+....+...+++++|++ .+.+++..|.+|.||||.|+.+ |+.++++.|+++++| +. .+|..|
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN----~~d~~G 109 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFIN-LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-IN----KKNSDG 109 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CC----CCCCCc
Confidence 445555444432334567777777 4678999999999999999865 789999999999999 55 689999
Q ss_pred CcHHHHHHh----------------chhhccccCCCCcHHHHHHhhCc
Q 041634 90 NTIQHETAT----------------RRLVRKIDYNGNTILHMAGIKIK 121 (363)
Q Consensus 90 ~t~LH~Aa~----------------~~lin~~D~~GnT~LHlAa~~~~ 121 (363)
+||||+|+. +..++.+|.+|.||||+|++.++
T Consensus 110 ~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 110 ETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNH 157 (489)
T ss_pred CcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC
Confidence 999999985 56788999999999999999876
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.34 E-value=9.5e-13 Score=124.80 Aligned_cols=142 Identities=15% Similarity=0.032 Sum_probs=111.4
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHh-----cCcHHHHHHHHHhCCCCchhhhh
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATY-----TKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~-----~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
+-.+..+|++|||++.. ++.+. +..|++....+++.+|.-|.||+++||- ..+.++|+.|.+.+ | ++.
T Consensus 262 NlaDsNGNTALHYsVSH-aNF~V-V~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-n-VNa--- 334 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSH-ANFDV-VSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-D-VNA--- 334 (452)
T ss_pred hhhcCCCCeeeeeeecc-cchHH-HHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-C-cch---
Confidence 34567899999999998 88884 4555555788899999999999999974 34678999999875 4 343
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcc
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTM 150 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~ 150 (363)
.-...|||+|++||. ++++|.||.||-|+|..|+.+||.+++. ++ -..|
T Consensus 335 KAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivk------------lL------LA~p 396 (452)
T KOG0514|consen 335 KASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVK------------LL------LAVP 396 (452)
T ss_pred hhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHH------------HH------hccC
Confidence 457799999999997 7889999999999999999999976651 11 1223
Q ss_pred ccccccCCCCCCCHHHHHHH-hcHHH
Q 041634 151 AHFLNHGNNMGFTPEELFAT-ANNEL 175 (363)
Q Consensus 151 ~~~~~~~N~~G~Tp~dl~~~-~~~~l 175 (363)
.......|.+|-|++.++.+ .|+++
T Consensus 397 ~cd~sLtD~DgSTAl~IAleagh~eI 422 (452)
T KOG0514|consen 397 SCDISLTDVDGSTALSIALEAGHREI 422 (452)
T ss_pred cccceeecCCCchhhhhHHhcCchHH
Confidence 34467889999999999865 45554
No 47
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.32 E-value=3.1e-12 Score=112.25 Aligned_cols=106 Identities=17% Similarity=0.030 Sum_probs=78.9
Q ss_pred CcccccCcCCCcHHhHHHhcCcH----HHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh----------------chh
Q 041634 42 HALYVFTIHDDTVLLMATYTKKS----DLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT----------------RRL 101 (363)
Q Consensus 42 ~~~~~~d~~G~TpLh~Aa~~G~~----eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~----------------~~l 101 (363)
.++...+.++.+++|.||+.|+. +++++|++.+++ .. .+|..|+||||+|+. +..
T Consensus 11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~----~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad 85 (166)
T PHA02743 11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-LH----RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD 85 (166)
T ss_pred hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hh----ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence 44556778899999999999998 555666776665 33 689999999999996 345
Q ss_pred hcccc-CCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHH-HHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 102 VRKID-YNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWY-ERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 102 in~~D-~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~-~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+|.+| ..|+||||+|+..++.+++ ++++. ..+ ..+.+|++|+||++++...
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv------------~~Ll~~~ga-------d~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELA------------EWLCRQLGV-------NLGAINYQHETAYHIAYKM 138 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHH------------HHHHhccCC-------CccCcCCCCCCHHHHHHHc
Confidence 67888 5899999999999875443 11111 112 2567899999999998754
No 48
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.32 E-value=1.4e-12 Score=127.23 Aligned_cols=116 Identities=22% Similarity=0.206 Sum_probs=100.1
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|...+++.+-..+||-.|+.. |+.+.+..++. .+.+.+..|..|.|.||+||.+||++|+++|++.++| .+ .
T Consensus 107 ga~VN~tT~TNStPLraACfD-G~leivKyLvE--~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gAD-vn----~ 178 (615)
T KOG0508|consen 107 GASVNDTTRTNSTPLRAACFD-GHLEIVKYLVE--HGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGAD-VN----A 178 (615)
T ss_pred cCccccccccCCccHHHHHhc-chhHHHHHHHH--cCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCC-cc----h
Confidence 566677777677999999997 99998887774 4788999999999999999999999999999999999 66 5
Q ss_pred cCCCCCcHHHHHHh------------chhhccccCCCCcHHHHHHhhCcccCcccc
Q 041634 85 QNKAGNTIQHETAT------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM 128 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~ 128 (363)
++.+|+|+||.+++ ....-.+|..|.|||-.|+..|+.++++.+
T Consensus 179 ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L 234 (615)
T KOG0508|consen 179 KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERL 234 (615)
T ss_pred hcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHH
Confidence 89999999999997 223346799999999999999998887644
No 49
>PHA02795 ankyrin-like protein; Provisional
Probab=99.31 E-value=6.1e-12 Score=125.22 Aligned_cols=110 Identities=14% Similarity=0.039 Sum_probs=87.4
Q ss_pred CCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCccccc-----CcCCCcHHhHHHhcCcHHHHHHHHHhCCCC
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVF-----TIHDDTVLLMATYTKKSDLVIKLLDELPDQ 77 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~-----d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~ 77 (363)
+.|.+.+. +...++||.|+.. ++. +++++|++++..+.+.. +..|.||+|.|+..|+.|+++.|++++++
T Consensus 139 ~~GADIn~--~~~~t~lh~A~~~-~~~-eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD- 213 (437)
T PHA02795 139 DHGAVIYK--IECLNAYFRGICK-KES-SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED- 213 (437)
T ss_pred HCCCCCCC--CCCCCHHHHHHHc-CcH-HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC-
Confidence 34666543 2335799999976 654 47777777654333322 23488999999999999999999999999
Q ss_pred chhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCc
Q 041634 78 SLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIK 121 (363)
Q Consensus 78 ~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~ 121 (363)
+. .+|..|+||||+|+. ++.+|.+|.+|+||||+|+..|+
T Consensus 214 IN----~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 214 IN----QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred cC----cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 65 689999999999997 67889999999999999999885
No 50
>PHA02917 ankyrin-like protein; Provisional
Probab=99.30 E-value=1e-11 Score=130.87 Aligned_cols=64 Identities=16% Similarity=0.075 Sum_probs=42.0
Q ss_pred cccccccccHHHHHHHHc--cCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHH----HHHHHHHh
Q 041634 8 DTDAKLKINSELYNALMI--KKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSD----LVIKLLDE 73 (363)
Q Consensus 8 ~~~~~~~ln~~Lh~A~~~--~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~e----iV~~LL~~ 73 (363)
.....+..+++||+|+.. .|+.+ ++++|++ .+.+++..|.+|.||||.|+..|+.+ +++.|++.
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~-~v~~Ll~-~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~ 94 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVE-VVKLLLD-SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEA 94 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHH-HHHHHHH-CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhc
Confidence 333456678899997543 03344 5566655 46677888899999999888887743 34455544
No 51
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.29 E-value=1.2e-11 Score=132.49 Aligned_cols=150 Identities=16% Similarity=0.046 Sum_probs=104.5
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHh-HHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLL-MATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh-~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
..+..++++.|+.. ||.+.+.+++.+..+.+++..|..|+|||| .|+.+++.++++.|++.+. .|..|+
T Consensus 14 ~~~~~~~~l~A~~~-g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~---------~~~~G~ 83 (743)
T TIGR00870 14 LSDEEKAFLPAAER-GDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC---------RGAVGD 83 (743)
T ss_pred CCHHHHHHHHHHHc-CCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC---------CCCcCh
Confidence 34455899999998 999989888877556778889999999999 8899999999999998653 367899
Q ss_pred cHHHHHHhc------h----------------hhcc----ccCCCCcHHHHHHhhCcccCcccc--CCc-----------
Q 041634 91 TIQHETATR------R----------------LVRK----IDYNGNTILHMAGIKIKDYGSEKM--EGP----------- 131 (363)
Q Consensus 91 t~LH~Aa~~------~----------------lin~----~D~~GnT~LHlAa~~~~~~~~~~~--~~~----------- 131 (363)
|+||.|+.+ . ..+. .+..|.||||+|+..++.++++.+ .|+
T Consensus 84 T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~ 163 (743)
T TIGR00870 84 TLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFF 163 (743)
T ss_pred HHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchh
Confidence 999999970 0 1111 124699999999999988776422 111
Q ss_pred --------------hhhhHHHHHHHHHhhhhc-cccccccCCCCCCCHHHHHHHh
Q 041634 132 --------------ALLLRDELLWYERVKSVT-MAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 132 --------------al~l~~~l~~~~~V~~~~-~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
.+.......--+.++-.+ .+...+.+|+.|.||++++...
T Consensus 164 ~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 164 VKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVME 218 (743)
T ss_pred hcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhh
Confidence 111111111111122111 1224678899999999998765
No 52
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.27 E-value=7.2e-12 Score=115.71 Aligned_cols=95 Identities=26% Similarity=0.153 Sum_probs=81.1
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
.-.+||.|+.+ |+.. +++.|+. ++.-++..+...+||||+||.+||.++|+.||+..+| ++ .+|..|+||||
T Consensus 34 gfsplhwaake-gh~a-ivemll~-rgarvn~tnmgddtplhlaaahghrdivqkll~~kad-vn----avnehgntplh 105 (448)
T KOG0195|consen 34 GFSPLHWAAKE-GHVA-IVEMLLS-RGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKAD-VN----AVNEHGNTPLH 105 (448)
T ss_pred Ccchhhhhhhc-ccHH-HHHHHHh-cccccccccCCCCcchhhhhhcccHHHHHHHHHHhcc-cc----hhhccCCCchh
Confidence 34799999987 8776 5555555 4777888888899999999999999999999999999 66 58999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHH
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAG 117 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa 117 (363)
+||. ++.++.-+++|.|||.-|-
T Consensus 106 yacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 106 YACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred hhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 9997 5677888999999997653
No 53
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=4.3e-12 Score=91.11 Aligned_cols=52 Identities=23% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 40 PDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 40 ~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
...+++..|.+|.||||+||+.|+.++|++|++.+.+ .. .+|++|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~----~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PN----AKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT-------TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CC----CCcCCCCCHHHhC
Confidence 3578889999999999999999999999999987777 44 7899999999987
No 54
>PHA02730 ankyrin-like protein; Provisional
Probab=99.26 E-value=2.2e-11 Score=126.80 Aligned_cols=152 Identities=13% Similarity=-0.019 Sum_probs=107.9
Q ss_pred cccccHHHHHHHHccCC--hHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcC--cHHHHHHHHHhCCCCchhhhhccCC
Q 041634 12 KLKINSELYNALMIKKD--EQKVSELCRKVPDHALYVFTIHDDTVLLMATYTK--KSDLVIKLLDELPDQSLDKMTRQNK 87 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~--~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G--~~eiV~~LL~~~p~~~~~~~~~~d~ 87 (363)
.+.++++||+|+.. |+ ..+++++|++ .+++++.+|.+|.||||+|+..| +.|+|+.|++.+.+...+ ..|+
T Consensus 38 d~~G~TaLh~A~~~-~~~~~~eivklLLs-~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~---~~~~ 112 (672)
T PHA02730 38 DRRGNNALHCYVSN-KCDTDIKIVRLLLS-RGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNE---LTSN 112 (672)
T ss_pred CCCCCcHHHHHHHc-CCcCcHHHHHHHHh-CCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcc---cccc
Confidence 35688999999987 64 3668888887 57889999999999999999977 799999999997652244 6788
Q ss_pred CCCcHHHHHHh---------chhh-------ccc----cC-CCCcHHHHHHhhCcccCcccc--CCchh-----------
Q 041634 88 AGNTIQHETAT---------RRLV-------RKI----DY-NGNTILHMAGIKIKDYGSEKM--EGPAL----------- 133 (363)
Q Consensus 88 ~G~t~LH~Aa~---------~~li-------n~~----D~-~GnT~LHlAa~~~~~~~~~~~--~~~al----------- 133 (363)
.|.+|||.++. +-++ +.. |+ +|-+|+++|+..++.++++.+ .|+..
T Consensus 113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~ 192 (672)
T PHA02730 113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD 192 (672)
T ss_pred cCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence 89999998887 1122 222 22 789999999999998887533 12211
Q ss_pred -hhHHHHHH------------HHHhhhhcccc--ccccCCCCCCCHHHHH
Q 041634 134 -LLRDELLW------------YERVKSVTMAH--FLNHGNNMGFTPEELF 168 (363)
Q Consensus 134 -~l~~~l~~------------~~~V~~~~~~~--~~~~~N~~G~Tp~dl~ 168 (363)
.+...++| .+++-+.+-.+ .++.+|++|+||++.+
T Consensus 193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~ 242 (672)
T PHA02730 193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYY 242 (672)
T ss_pred CCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 01122333 22333333333 4688999999999863
No 55
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.25 E-value=5.1e-12 Score=129.21 Aligned_cols=159 Identities=18% Similarity=0.073 Sum_probs=111.0
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
.+..++||+|++. |+.+.+..++.. ....+..+..|.||||.||++||.+++.+|++++.| .. .+|++++|+
T Consensus 80 ~kg~~plhlaaw~-g~~e~vkmll~q--~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad-p~----i~nns~~t~ 151 (854)
T KOG0507|consen 80 TKGILPLHLAAWN-GNLEIVKMLLLQ--TDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD-PF----IRNNSKETV 151 (854)
T ss_pred ccCcceEEehhhc-CcchHHHHHHhc--ccCCCcccccCcCccchhhhhcchHHHHHHHhcCCC-cc----ccCcccccH
Confidence 4566789999998 888866666555 366778888899999999999999999999999988 44 689999999
Q ss_pred HHHHHh------------c---------hhhccccCCCCcHHHHHHhhCcccCcccc------------CCchhhhHHHH
Q 041634 93 QHETAT------------R---------RLVRKIDYNGNTILHMAGIKIKDYGSEKM------------EGPALLLRDEL 139 (363)
Q Consensus 93 LH~Aa~------------~---------~lin~~D~~GnT~LHlAa~~~~~~~~~~~------------~~~al~l~~~l 139 (363)
|-+|++ . .--..++-.+-+|||+|+++||.++++.+ .|+++.-+...
T Consensus 152 ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~gtalheaalc 231 (854)
T KOG0507|consen 152 LDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDGTALHEAALC 231 (854)
T ss_pred HHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccchhhhhHhhc
Confidence 999998 0 00234677899999999999998876433 22333211111
Q ss_pred HHHHHhhhhcc-ccccccCCCCCCCHHHHHHHhcHHHHHhh
Q 041634 140 LWYERVKSVTM-AHFLNHGNNMGFTPEELFATANNELRAQS 179 (363)
Q Consensus 140 ~~~~~V~~~~~-~~~~~~~N~~G~Tp~dl~~~~~~~l~~~~ 179 (363)
.-.+.|...+. ......+|.+|+|++|+..+-..+...++
T Consensus 232 gk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei 272 (854)
T KOG0507|consen 232 GKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEI 272 (854)
T ss_pred CcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhh
Confidence 11111221111 12457889999999999877555544443
No 56
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.21 E-value=3.3e-11 Score=115.25 Aligned_cols=101 Identities=15% Similarity=-0.077 Sum_probs=77.1
Q ss_pred ccCcCCCcH-HhHHHhcCcHHHHHHHHHhCCCCchhhhhcc----CCCCCcHHHHHHh-------------chhhcccc-
Q 041634 46 VFTIHDDTV-LLMATYTKKSDLVIKLLDELPDQSLDKMTRQ----NKAGNTIQHETAT-------------RRLVRKID- 106 (363)
Q Consensus 46 ~~d~~G~Tp-Lh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~----d~~G~t~LH~Aa~-------------~~lin~~D- 106 (363)
.+|.+|.|+ ||.|++.|+.++++.|++++++ .. .+ |+.|+||||+|+. ++.+|.+|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN----~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~ 101 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGAD-PE----APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAE 101 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-cc----ccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccC
Confidence 457777765 5667778999999999999998 54 34 5689999999997 67788864
Q ss_pred CCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 107 YNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 107 ~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
..|+||||+|+..++.+++ +++....+ ..+.+|.+|.||.+++.+
T Consensus 102 ~~g~TpLh~Aa~~~~~eiv------------klLL~~GA-------din~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 102 EAKITPLYISVLHGCLKCL------------EILLSYGA-------DINIQTNDMVTPIELALM 146 (300)
T ss_pred CCCCCHHHHHHHcCCHHHH------------HHHHHCCC-------CCCCCCCCCCCHHHHHHH
Confidence 5899999999999876543 11211122 257789999999999865
No 57
>PHA02730 ankyrin-like protein; Provisional
Probab=99.20 E-value=8.1e-11 Score=122.58 Aligned_cols=129 Identities=12% Similarity=-0.026 Sum_probs=94.4
Q ss_pred HHHHHHHHccCC--hHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc----HHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 17 SELYNALMIKKD--EQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK----SDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 17 ~~Lh~A~~~~g~--~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~----~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
.-||.-... ++ ..+++++|.++ +.+++.. .+|.||||.|+..++ .|+++.|++++++.... .+|..|+
T Consensus 345 ~~l~~Y~~~-~~~v~ieIvelLIs~-GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN---~kd~~G~ 418 (672)
T PHA02730 345 AMLINYLHY-GDMVSIPILRCMLDN-GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN---HVSNNGR 418 (672)
T ss_pred HHHHHHHhc-CCcCcHHHHHHHHHC-CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc---ccccCCC
Confidence 356666665 63 56788888874 5777764 789999999999885 89999999998731123 6799999
Q ss_pred cHHHH---HH-----------------h-----chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHh
Q 041634 91 TIQHE---TA-----------------T-----RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERV 145 (363)
Q Consensus 91 t~LH~---Aa-----------------~-----~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V 145 (363)
||||. |. + ++.+|.+|+.|+||||+|+..++.+++ +++....+
T Consensus 419 T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eiv------------e~LI~~GA 486 (672)
T PHA02730 419 LCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFA------------RRLLEYGA 486 (672)
T ss_pred chHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHH------------HHHHHCCC
Confidence 99994 32 1 457899999999999999998865433 12211112
Q ss_pred hhhccccccccCCC-CCCCHHHHHHH
Q 041634 146 KSVTMAHFLNHGNN-MGFTPEELFAT 170 (363)
Q Consensus 146 ~~~~~~~~~~~~N~-~G~Tp~dl~~~ 170 (363)
..+.+|+ .|+||.+.+..
T Consensus 487 -------dIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 487 -------SVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred -------CCCCCCCcCCcCHHHHHHH
Confidence 2567786 59999998765
No 58
>PHA02792 ankyrin-like protein; Provisional
Probab=99.19 E-value=3.4e-11 Score=124.22 Aligned_cols=90 Identities=18% Similarity=-0.023 Sum_probs=69.0
Q ss_pred CCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCC-----------------------------------ccccc
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDH-----------------------------------ALYVF 47 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~-----------------------------------~~~~~ 47 (363)
+.|.+.+...+..++++|+|+.. +...+++++|.+.+.. ..+..
T Consensus 93 ~~GAdvN~~~n~~~~~l~ya~~~-~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 171 (631)
T PHA02792 93 SKGLEINSIKNGINIVEKYATTS-NPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYD 171 (631)
T ss_pred HcCCCcccccCCCCcceeEeecC-CCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccC
Confidence 35777777777788899999765 4555566776664421 11134
Q ss_pred CcCCCcHHhHHHhcC-------cHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 48 TIHDDTVLLMATYTK-------KSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 48 d~~G~TpLh~Aa~~G-------~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
|..|.||||.|+.++ +.|+++.||+++++ .. .+|..|.||||+|+.
T Consensus 172 ~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~-~~----~~d~~g~t~l~~~~~ 224 (631)
T PHA02792 172 DRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKE-MR----YYTYREHTTLYYYVD 224 (631)
T ss_pred CCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCC-cC----ccCCCCChHHHHHHH
Confidence 667999999999999 89999999999988 55 488999999999996
No 59
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.18 E-value=1.3e-10 Score=90.54 Aligned_cols=68 Identities=26% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 19 LYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 19 Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
||.|+.. |+.+.+..++.. +.+++. |+||||+|+..|+.+++++|++.+++ .. .+|..|+||||+|+.
T Consensus 1 L~~A~~~-~~~~~~~~ll~~--~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~----~~~~~g~t~L~~A~~ 68 (89)
T PF12796_consen 1 LHIAAQN-GNLEILKFLLEK--GADINL----GNTALHYAAENGNLEIVKLLLENGAD-IN----SQDKNGNTALHYAAE 68 (89)
T ss_dssp HHHHHHT-TTHHHHHHHHHT--TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-----BSTTSSBHHHHHHH
T ss_pred CHHHHHc-CCHHHHHHHHHC--cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhccc-cc----ccCCCCCCHHHHHHH
Confidence 7999998 988867666664 333333 89999999999999999999999988 44 466777777777766
No 60
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.18 E-value=5.3e-11 Score=102.73 Aligned_cols=104 Identities=18% Similarity=-0.055 Sum_probs=86.0
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
+..+++..++||.|++. |....+.++++. +.+.+.++.+|+||||.||+..+.+++..||++++| ++ ...+.
T Consensus 91 NtrD~D~YTpLHRAaYn-~h~div~~ll~~--gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaD-Vn----A~t~g 162 (228)
T KOG0512|consen 91 NTRDEDEYTPLHRAAYN-GHLDIVHELLLS--GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGAD-VN----AQTKG 162 (228)
T ss_pred cccccccccHHHHHHhc-CchHHHHHHHHc--cCCcccccccCccchhhhhcccchhHHHHHHhccCc-cc----ccccc
Confidence 34566788999999999 999988888877 678889999999999999999999999999999999 65 35677
Q ss_pred CCcHHHHHHhc---------------hhhccccCCCCcHHHHHHhhC
Q 041634 89 GNTIQHETATR---------------RLVRKIDYNGNTILHMAGIKI 120 (363)
Q Consensus 89 G~t~LH~Aa~~---------------~lin~~D~~GnT~LHlAa~~~ 120 (363)
.+||||+||.. .....+++.|.||+.+|-+-+
T Consensus 163 ~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 163 LLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred cchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 78999999971 122446777788887776654
No 61
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.15 E-value=5.9e-11 Score=128.45 Aligned_cols=98 Identities=23% Similarity=0.142 Sum_probs=64.4
Q ss_pred cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHH
Q 041634 49 IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHM 115 (363)
Q Consensus 49 ~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHl 115 (363)
+.|.++||+|+..|++.+++.+++++.+ +. .++..|.||||+|+. +.+++.+|+.|.||||.
T Consensus 505 ~~~l~~lhla~~~~~v~~~~~l~~~ga~-v~----~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~ 579 (1143)
T KOG4177|consen 505 KKGLTPLHLAADEDTVKVAKILLEHGAN-VD----LRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQ 579 (1143)
T ss_pred hhccchhhhhhhhhhHHHHHHHhhcCCc-ee----hhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhH
Confidence 3344444444444444444444444444 22 567788899999987 67788899999999999
Q ss_pred HHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 116 AGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 116 Aa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
|+..|+.+++ +++.-... ..+..+.+|.||+.++..
T Consensus 580 Aa~~G~~~i~------------~LLlk~GA-------~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 580 AAQQGHNDIA------------ELLLKHGA-------SVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred HHHcChHHHH------------HHHHHcCC-------CCCcccccCcchhHHHHH
Confidence 9998876554 22211111 367889999999998775
No 62
>PHA02917 ankyrin-like protein; Provisional
Probab=99.13 E-value=1.6e-10 Score=122.00 Aligned_cols=88 Identities=15% Similarity=0.017 Sum_probs=67.3
Q ss_pred HHHHhhcCCCCcccccCcCCCcHHhHH--HhcCcHHHHHHHHHhCCCCchhhhhccCCCC-----------CcHHHHHHh
Q 041634 32 VSELCRKVPDHALYVFTIHDDTVLLMA--TYTKKSDLVIKLLDELPDQSLDKMTRQNKAG-----------NTIQHETAT 98 (363)
Q Consensus 32 v~~lL~~~~~~~~~~~d~~G~TpLh~A--a~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G-----------~t~LH~Aa~ 98 (363)
++++|.+ .+.+++..|.+|.||||.| +..|+.|+|+.|++++++ +.. -...|+.| +||||+|+.
T Consensus 118 ~vk~Ll~-~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~-~d~~~~~g~~~~~~~~~~~~t~L~~a~~ 194 (661)
T PHA02917 118 LIKVLVE-HGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLY-EDEDDEYGYAYDDYQPRNCGTVLHLYII 194 (661)
T ss_pred HHHHHHH-cCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccc-cccccccccccccccccccccHHHHHHh
Confidence 4444444 3677888899999999954 468999999999999998 541 00122334 699999962
Q ss_pred ------------------------chhhccccCCCCcHHHHHHhhCcc
Q 041634 99 ------------------------RRLVRKIDYNGNTILHMAGIKIKD 122 (363)
Q Consensus 99 ------------------------~~lin~~D~~GnT~LHlAa~~~~~ 122 (363)
+..+|.+|.+|+||||+|++.|+.
T Consensus 195 ~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 195 SHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHI 242 (661)
T ss_pred hcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCC
Confidence 567899999999999999999975
No 63
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.13 E-value=2.2e-10 Score=118.50 Aligned_cols=139 Identities=21% Similarity=0.199 Sum_probs=95.2
Q ss_pred ccHHHHHHHHcc-CChHHHHHHhhcCCCCccc-cc---CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchh----hhhcc
Q 041634 15 INSELYNALMIK-KDEQKVSELCRKVPDHALY-VF---TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLD----KMTRQ 85 (363)
Q Consensus 15 ln~~Lh~A~~~~-g~~~~v~~lL~~~~~~~~~-~~---d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~----~~~~~ 85 (363)
+.+.||.|+... .+..++...|++..+..++ .. .-.|+||||+|..+.+.++|+.|++.++| ++. .....
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa~G~FF~~ 221 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGAD-VHARACGAFFCP 221 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHhhccccCc
Confidence 567999999831 2233455555544433333 11 23499999999999999999999999999 543 11122
Q ss_pred CC---------------CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHH
Q 041634 86 NK---------------AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRD 137 (363)
Q Consensus 86 d~---------------~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~ 137 (363)
|+ -|..||-.||. ++++|++|.+|||.||..+..-.
T Consensus 222 ~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~---------------- 285 (782)
T KOG3676|consen 222 DDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFV---------------- 285 (782)
T ss_pred ccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHH----------------
Confidence 22 26789999997 78899999999999999998721
Q ss_pred HHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 138 ELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 138 ~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
...|..+-+.........+|++|.||+.++.+.
T Consensus 286 -~~My~~~L~~ga~~l~~v~N~qgLTPLtLAakl 318 (782)
T KOG3676|consen 286 -TEMYDLALELGANALEHVRNNQGLTPLTLAAKL 318 (782)
T ss_pred -HHHHHHHHhcCCCccccccccCCCChHHHHHHh
Confidence 122333222221123568899999999998764
No 64
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.12 E-value=2.1e-10 Score=124.35 Aligned_cols=113 Identities=16% Similarity=0.002 Sum_probs=94.2
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.|.+.+.....++++||.|+.. |+.+ ++++|++ .+.+++.+|.+|.||||.|+..|+.++++.|++....
T Consensus 547 ~G~d~n~~d~~G~TpLh~Aa~~-g~~~-~v~~Ll~-~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~------- 616 (823)
T PLN03192 547 AKLDPDIGDSKGRTPLHIAASK-GYED-CVLVLLK-HACNVHIRDANGNTALWNAISAKHHKIFRILYHFASI------- 616 (823)
T ss_pred CCCCCCCCCCCCCCHHHHHHHc-ChHH-HHHHHHh-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcc-------
Confidence 3566666777789999999998 8766 5555555 3678899999999999999999999999999987665
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcc
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSE 126 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~ 126 (363)
..+..|.++||.|+. +..+|.+|.+|+||||+|+..|+.++++
T Consensus 617 ~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~ 672 (823)
T PLN03192 617 SDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVR 672 (823)
T ss_pred cCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 235678899999998 5678999999999999999999877664
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=99.10 E-value=1.9e-10 Score=118.73 Aligned_cols=134 Identities=16% Similarity=-0.018 Sum_probs=98.8
Q ss_pred HHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHh-cCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 18 ELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATY-TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 18 ~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~-~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
.+|+-+...|+. +++++|.+ .+++++.++.+|.||+|.|+. .|+.|++++||+.+++ .. ..+..|.|||+.-
T Consensus 74 ~~~~~~s~n~~l-Elvk~LI~-~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad-~~----~~~~~g~~~~~~~ 146 (631)
T PHA02792 74 IFEYLCSDNIDI-ELLKLLIS-KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIP-TC----SNIQYGYKIIIEQ 146 (631)
T ss_pred HHHHHHHhcccH-HHHHHHHH-cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCC-cc----cccccCcchhhhh
Confidence 787777663554 56666666 478999999999999999965 7999999999999988 33 4689999999987
Q ss_pred Hh----------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcccc--ccccCC
Q 041634 97 AT----------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAH--FLNHGN 158 (363)
Q Consensus 97 a~----------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~--~~~~~N 158 (363)
+. +..+|.+|..|+||||+|+..++.+. . --..+|-+++-.+ ..+.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~------~--------~~~~~v~k~Li~~g~~~~~~d 212 (631)
T PHA02792 147 ITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDG------Y--------ATSLDVINYLISHEKEMRYYT 212 (631)
T ss_pred cccccccchhhhccccccccccccCCCCCCchHHHHHhhCCccc------c--------cCCHHHHHHHHhCCCCcCccC
Confidence 76 23678999999999999999872110 0 0012333333333 245578
Q ss_pred CCCCCHHHHHHHhc
Q 041634 159 NMGFTPEELFATAN 172 (363)
Q Consensus 159 ~~G~Tp~dl~~~~~ 172 (363)
+.|.||++.+.+..
T Consensus 213 ~~g~t~l~~~~~~~ 226 (631)
T PHA02792 213 YREHTTLYYYVDKC 226 (631)
T ss_pred CCCChHHHHHHHcc
Confidence 88999999987654
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.09 E-value=5.5e-10 Score=90.41 Aligned_cols=102 Identities=24% Similarity=0.121 Sum_probs=83.3
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
.++.++||.|+.. ++.+.+..++.. .......|..|.||||.|+..++.++++.|++.+++ .. ..|..|.||
T Consensus 5 ~~g~t~l~~a~~~-~~~~~i~~li~~--~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~----~~~~~~~~~ 76 (126)
T cd00204 5 EDGRTPLHLAASN-GHLEVVKLLLEN--GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VN----ARDKDGNTP 76 (126)
T ss_pred cCCCCHHHHHHHc-CcHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-cc----ccCCCCCCH
Confidence 4567899999998 887655555544 333377888999999999999999999999999976 43 578999999
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCcc
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIKD 122 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~ 122 (363)
+|+|+. +...+..|..|.||||.|...++.
T Consensus 77 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~ 119 (126)
T cd00204 77 LHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHL 119 (126)
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCH
Confidence 999998 223567899999999999988654
No 67
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.08 E-value=5e-10 Score=90.67 Aligned_cols=101 Identities=27% Similarity=0.183 Sum_probs=78.8
Q ss_pred cCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHH
Q 041634 47 FTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTIL 113 (363)
Q Consensus 47 ~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~L 113 (363)
.|.+|.||||.|++.|+.++++.|++.+++ .. .+|..|.++||.|+. +...+..|..|.||+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~----~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l 77 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VN----AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPL 77 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CC----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 467899999999999999999999999998 43 689999999999998 224677889999999
Q ss_pred HHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 114 HMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 114 HlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
|.|++.++.+++ +...... ...+..|..|+||.+.+...
T Consensus 78 ~~a~~~~~~~~~------------~~L~~~~-------~~~~~~~~~~~~~l~~~~~~ 116 (126)
T cd00204 78 HLAARNGNLDVV------------KLLLKHG-------ADVNARDKDGRTPLHLAAKN 116 (126)
T ss_pred HHHHHcCcHHHH------------HHHHHcC-------CCCcccCCCCCCHHHHHHhc
Confidence 999999864332 1111111 12456788999999987654
No 68
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.04 E-value=3.7e-10 Score=88.03 Aligned_cols=62 Identities=31% Similarity=0.240 Sum_probs=53.1
Q ss_pred HhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCc
Q 041634 55 LLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIK 121 (363)
Q Consensus 55 Lh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~ 121 (363)
||.|++.|+.++++.|++.+++ . +. |+||||+|+. +..++.+|.+|+||||+|+..++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-~-------~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 71 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-I-------NL-GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGN 71 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-T-------TS-SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-C-------CC-CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCC
Confidence 7999999999999999998877 2 22 9999999998 56778899999999999999987
Q ss_pred ccCc
Q 041634 122 DYGS 125 (363)
Q Consensus 122 ~~~~ 125 (363)
.+++
T Consensus 72 ~~~~ 75 (89)
T PF12796_consen 72 LEIV 75 (89)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 69
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.02 E-value=2.7e-10 Score=101.83 Aligned_cols=101 Identities=18% Similarity=-0.024 Sum_probs=60.3
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
+.+-++|..|+.+ |+.. ++++|++ .+.+.+...+...++|.+|++.|+.+||+.||.+.+| ++ .-|-+|-||
T Consensus 158 e~GfTpLiWAaa~-G~i~-vV~fLL~-~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vd-VN----vyDwNGgTp 229 (296)
T KOG0502|consen 158 EFGFTPLIWAAAK-GHIP-VVQFLLN-SGADPDALGKYRESALSLATRGGYTDIVELLLTREVD-VN----VYDWNGGTP 229 (296)
T ss_pred ccCchHhHHHHhc-CchH-HHHHHHH-cCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCC-cc----eeccCCCce
Confidence 3445566666665 5555 3444443 2445555555566666666666666666666666666 44 356666666
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCc
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIK 121 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~ 121 (363)
|-+|++ +++++.-|..|++++.+|+..|.
T Consensus 230 LlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 230 LLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGY 271 (296)
T ss_pred eeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhh
Confidence 666665 44556666666666666666653
No 70
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.00 E-value=1.6e-09 Score=96.49 Aligned_cols=103 Identities=20% Similarity=0.069 Sum_probs=86.3
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc-----HHHHHHHHHhCC--CCchhhhhccCC
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK-----SDLVIKLLDELP--DQSLDKMTRQNK 87 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~-----~eiV~~LL~~~p--~~~~~~~~~~d~ 87 (363)
...++|.+... ++.+.+..++.. +.+.+.+|.+|.||||+|+..|+ .++++.|++.++ + ... .+|.
T Consensus 73 ~~~~~~~~~~~-~~~~~~~~l~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~-~~~---~~~~ 145 (235)
T COG0666 73 GRLPLHSAASK-GDDKIVKLLLAS--GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLD-VNN---LRDE 145 (235)
T ss_pred ccCHHHHHHHc-CcHHHHHHHHHc--CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCC-Ccc---ccCC
Confidence 55789999987 877766455544 55669999999999999999999 999999999999 6 454 7899
Q ss_pred CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 88 AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 88 ~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
.|+||||+|+. +...+..|..|.|+||.|+..++...
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 195 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIEL 195 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHH
Confidence 99999999998 44567779999999999999987543
No 71
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.97 E-value=9.1e-10 Score=98.48 Aligned_cols=125 Identities=18% Similarity=0.059 Sum_probs=95.2
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
.++..++.+ .+.+.+ .++ .+..++..|..|.|||.+|+.+|+.++|++||+.++| .. ..-+...++|.+|
T Consensus 131 s~~slsVhq-l~L~~~-~~~---~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd-p~----~lgk~resALsLA 200 (296)
T KOG0502|consen 131 SPLSLSVHQ-LHLDVV-DLL---VNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD-PD----ALGKYRESALSLA 200 (296)
T ss_pred ChhhHHHHH-HHHHHH-HHH---hhccccCccccCchHhHHHHhcCchHHHHHHHHcCCC-hh----hhhhhhhhhHhHH
Confidence 356677765 443322 222 2456788999999999999999999999999999988 33 4667778999999
Q ss_pred Hh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccc-cccccCCCCCC
Q 041634 97 AT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMA-HFLNHGNNMGF 162 (363)
Q Consensus 97 a~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~-~~~~~~N~~G~ 162 (363)
+. +.++|.-|-+|-|||-+|++-+|.+++| ..+.+ .+.+..+..|.
T Consensus 201 t~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve--------------------~Ll~sGAd~t~e~dsGy 260 (296)
T KOG0502|consen 201 TRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVE--------------------SLLNSGADVTQEDDSGY 260 (296)
T ss_pred hcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHH--------------------HHHhcCCCcccccccCC
Confidence 98 4578999999999999999988865542 11111 13677788999
Q ss_pred CHHHHHHHh
Q 041634 163 TPEELFATA 171 (363)
Q Consensus 163 Tp~dl~~~~ 171 (363)
++.|++...
T Consensus 261 ~~mdlAVal 269 (296)
T KOG0502|consen 261 WIMDLAVAL 269 (296)
T ss_pred cHHHHHHHh
Confidence 999998653
No 72
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.97 E-value=6e-10 Score=114.26 Aligned_cols=129 Identities=20% Similarity=0.075 Sum_probs=100.9
Q ss_pred HHHHHHHHccCChHHHHHHhhcCC-----------CCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhcc
Q 041634 17 SELYNALMIKKDEQKVSELCRKVP-----------DHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQ 85 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~-----------~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~ 85 (363)
+.|..|+.. ||.+.+..+|.... ....+..|.+|.|.||.|+.+|+.++++.|++..+- .+ +.
T Consensus 5 qel~~a~ka-~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~--ld---l~ 78 (854)
T KOG0507|consen 5 QELIDACKA-GDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL--LD---LC 78 (854)
T ss_pred hhHHHhhhc-ccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh--hh---hh
Confidence 568888887 99998888776543 233446688899999999999999999999998774 45 78
Q ss_pred CCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcccc
Q 041634 86 NKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAH 152 (363)
Q Consensus 86 d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~ 152 (363)
|.+|.+|||+|+. ....|.+..+|.||||+||+.||.+++ +++.-+..+
T Consensus 79 d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv------------~~Ll~~~ad------ 140 (854)
T KOG0507|consen 79 DTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVV------------FYLLKKNAD------ 140 (854)
T ss_pred hccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHH------------HHHHhcCCC------
Confidence 8999999999997 455688899999999999999987665 122212211
Q ss_pred ccccCCCCCCCHHHHHHH
Q 041634 153 FLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 153 ~~~~~N~~G~Tp~dl~~~ 170 (363)
.-..|+.++|+.|++.+
T Consensus 141 -p~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 141 -PFIRNNSKETVLDLASR 157 (854)
T ss_pred -ccccCcccccHHHHHHH
Confidence 35789999999999765
No 73
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.93 E-value=1.6e-09 Score=107.64 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=64.0
Q ss_pred HHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 19 LYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 19 Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
+..|+.. ||.+++..++.. +...+..+.+|.|+||-+|.-.+.++|++|++++++ ++ ..|+.||||||.|+.
T Consensus 44 ~l~A~~~-~d~~ev~~ll~~--ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn----~~d~e~wtPlhaaas 115 (527)
T KOG0505|consen 44 FLEACSR-GDLEEVRKLLNR--GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VN----AQDNEGWTPLHAAAS 115 (527)
T ss_pred HHhcccc-ccHHHHHHHhcc--CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCC-cc----ccccccCCcchhhcc
Confidence 5667776 999999999877 455688899999999999999999999999999999 66 589999999999986
No 74
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.86 E-value=5e-09 Score=99.84 Aligned_cols=110 Identities=21% Similarity=0.131 Sum_probs=86.4
Q ss_pred ccccccccccHHHHHHHHcc----CChHHHHHHhhcCCCCccccc-CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhh
Q 041634 7 EDTDAKLKINSELYNALMIK----KDEQKVSELCRKVPDHALYVF-TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 7 ~~~~~~~~ln~~Lh~A~~~~----g~~~~v~~lL~~~~~~~~~~~-d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~ 81 (363)
+....++.+.++...++... .|.+.|.+|+.- ++++.+ .+.|+|+|++|+.+|++++|+.||..++| ++
T Consensus 294 ~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m---gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAd-VN-- 367 (452)
T KOG0514|consen 294 DVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM---GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGAD-VN-- 367 (452)
T ss_pred cccccccccccHHHHHHHHhhcchhhHHHHHHHHhc---cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCC-Cc--
Confidence 34445566778888877521 345556666544 345543 46699999999999999999999999999 66
Q ss_pred hhccCCCCCcHHHHHHh--------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 82 MTRQNKAGNTIQHETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
.+|.+|.|+|++|++ ..++...|.||-|+|.+|-..||.++
T Consensus 368 --iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eI 422 (452)
T KOG0514|consen 368 --IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREI 422 (452)
T ss_pred --cccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHH
Confidence 689999999999998 34567789999999999999998765
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.86 E-value=3.3e-09 Score=75.23 Aligned_cols=26 Identities=27% Similarity=0.236 Sum_probs=15.0
Q ss_pred CCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 51 DDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 51 G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
|.||||.|++.|+.++++.|++.+.|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d 26 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD 26 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC
Confidence 45666666666666666666665554
No 76
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.86 E-value=6.1e-09 Score=110.29 Aligned_cols=95 Identities=16% Similarity=0.047 Sum_probs=77.8
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
+...|+.|+.. |+.+.+..++.. +.+++.+|.+|.||||+||.+|+.++|+.|++.+++ .. .+|.+|+||||
T Consensus 82 ~~~~L~~aa~~-G~~~~vk~LL~~--Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn----~~d~~G~TpLh 153 (664)
T PTZ00322 82 LTVELCQLAAS-GDAVGARILLTG--GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PT----LLDKDGKTPLE 153 (664)
T ss_pred hHHHHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CC----CCCCCCCCHHH
Confidence 44579999998 998866555543 567888999999999999999999999999999998 54 68999999999
Q ss_pred HHHh--------------------chhhccccCCCCcHHHHHH
Q 041634 95 ETAT--------------------RRLVRKIDYNGNTILHMAG 117 (363)
Q Consensus 95 ~Aa~--------------------~~lin~~D~~GnT~LHlAa 117 (363)
+|+. +...+..+.+|++|+-.+.
T Consensus 154 ~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 154 LAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9997 2244557778888876665
No 77
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.84 E-value=7e-09 Score=73.54 Aligned_cols=53 Identities=21% Similarity=0.066 Sum_probs=40.1
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHH
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLL 71 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL 71 (363)
+++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||.|+.+|+.+++++||
T Consensus 2 ~t~lh~A~~~-g~~~~~~~Ll~~--~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAARS-GNLEIVKLLLEH--GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHHT-T-HHHHHHHHHT--TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHHh-CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 5799999998 887766555544 6778888999999999999999999999986
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.73 E-value=2.3e-08 Score=103.76 Aligned_cols=103 Identities=22% Similarity=0.152 Sum_probs=82.6
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCccccc---------Cc--------------CCCcHHhHHHhcCcHHHHHHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVF---------TI--------------HDDTVLLMATYTKKSDLVIKL 70 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~---------d~--------------~G~TpLh~Aa~~G~~eiV~~L 70 (363)
.+.++||.|+.+ .|.+ .+++|++ .+++++++ |. -|+.||-+||..+..|++++|
T Consensus 183 ~GqSaLHiAIv~-~~~~-~V~lLl~-~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 183 YGQSALHIAIVN-RDAE-LVRLLLA-AGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred cCcchHHHHHHh-ccHH-HHHHHHH-cCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 366899999997 7666 5555555 35566632 22 278999999999999999999
Q ss_pred HHhCCCCchhhhhccCCCCCcHHHHHHh---------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 71 LDELPDQSLDKMTRQNKAGNTIQHETAT---------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 71 L~~~p~~~~~~~~~~d~~G~t~LH~Aa~---------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
+++++| .. .+|..|+|+||.-|. +.+...++++|-|||-+||+.|..++
T Consensus 260 l~~gAd-~~----aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~em 323 (782)
T KOG3676|consen 260 LAHGAD-PN----AQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEM 323 (782)
T ss_pred HhcCCC-CC----ccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHH
Confidence 999998 55 699999999998886 23467789999999999999997654
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.69 E-value=8.7e-08 Score=88.94 Aligned_cols=103 Identities=21% Similarity=0.080 Sum_probs=89.1
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
++|..++-+ +|.+....+|.. --.++.+|..|.+||.-|+..|+.++|+.||+.++| ++. .++..+.||||+|
T Consensus 14 ~~Lle~i~K-ndt~~a~~LLs~--vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaD-vN~---~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 14 SPLLEAIDK-NDTEAALALLST--VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGAD-VND---KQHGTLYTPLMFA 86 (396)
T ss_pred hHHHHHHcc-CcHHHHHHHHHH--hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCC-cCc---ccccccccHHHHH
Confidence 689999987 999988888876 345788999999999999999999999999999999 777 7888999999999
Q ss_pred Hh-------------chhhccccCCCCcHHHHHHhhCcccCcc
Q 041634 97 AT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSE 126 (363)
Q Consensus 97 a~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~ 126 (363)
+. +.-....+.-|+|+-.+||--|+-+.++
T Consensus 87 ALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~ 129 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVA 129 (396)
T ss_pred HHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHH
Confidence 98 3344567888999999999999876653
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.66 E-value=2.9e-08 Score=105.20 Aligned_cols=68 Identities=18% Similarity=-0.004 Sum_probs=60.5
Q ss_pred cHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhh
Q 041634 53 TVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIK 119 (363)
Q Consensus 53 TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~ 119 (363)
++||.||..|+.+.++.|++.+++ .. .+|.+|+||||+|+. +..+|.+|.+|+||||+|+..
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-in----~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-PN----CRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CC----CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 358899999999999999999988 54 689999999999998 567789999999999999999
Q ss_pred CcccCc
Q 041634 120 IKDYGS 125 (363)
Q Consensus 120 ~~~~~~ 125 (363)
++.+++
T Consensus 159 g~~~iv 164 (664)
T PTZ00322 159 GFREVV 164 (664)
T ss_pred CcHHHH
Confidence 986654
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.63 E-value=4.1e-08 Score=97.31 Aligned_cols=73 Identities=16% Similarity=0.016 Sum_probs=63.6
Q ss_pred HHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHH
Q 041634 18 ELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETA 97 (363)
Q Consensus 18 ~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa 97 (363)
-|..|+.. |..+-|.+.+-+ -.+....|.+|-|+||-|+..||.+||++||+.+.+ ++ ..|.+||||||+|+
T Consensus 553 LLLDaaLe-GEldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-VN----a~DSdGWTPLHCAA 624 (752)
T KOG0515|consen 553 LLLDAALE-GELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-VN----AADSDGWTPLHCAA 624 (752)
T ss_pred HHHhhhhc-chHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc-cc----CccCCCCchhhhhh
Confidence 36778887 998878777766 346678899999999999999999999999999999 65 58999999999998
Q ss_pred h
Q 041634 98 T 98 (363)
Q Consensus 98 ~ 98 (363)
.
T Consensus 625 S 625 (752)
T KOG0515|consen 625 S 625 (752)
T ss_pred h
Confidence 7
No 82
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.63 E-value=2e-08 Score=71.95 Aligned_cols=43 Identities=37% Similarity=0.401 Sum_probs=20.3
Q ss_pred HHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHH
Q 041634 70 LLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMA 116 (363)
Q Consensus 70 LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlA 116 (363)
||+++|. ... .+|..|+||||+|+. +..++.+|++|.||||+|
T Consensus 1 LL~~~~~-~~n---~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPA-DVN---AQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T---TT------TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcC-CCc---CcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5677744 344 799999999999998 677899999999999997
No 83
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.54 E-value=1.8e-07 Score=73.10 Aligned_cols=104 Identities=13% Similarity=-0.048 Sum_probs=74.8
Q ss_pred HHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHH
Q 041634 18 ELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETA 97 (363)
Q Consensus 18 ~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa 97 (363)
....++.+ |+.++|.+...+ +.+++..- .|++|||+||..|..+++++|+..+++ +
T Consensus 5 ~~~W~vkN-G~~DeVk~~v~~--g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~-i------------------- 60 (117)
T KOG4214|consen 5 SVAWNVKN-GEIDEVKQSVNE--GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGAN-I------------------- 60 (117)
T ss_pred hHhhhhcc-CcHHHHHHHHHc--cccHHHHh-CCcccchHhhhcchHHHHHHHHHhccc-c-------------------
Confidence 45667887 999999999887 34555433 799999999999999999999999988 3
Q ss_pred hchhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHH
Q 041634 98 TRRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFA 169 (363)
Q Consensus 98 ~~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~ 169 (363)
+.+|+.|-|||--|+..||...+ +++...... ...+-.+|++..|..+
T Consensus 61 -----~~kDKygITPLLsAvwEGH~~cV------------klLL~~GAd-------rt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 61 -----QDKDKYGITPLLSAVWEGHRDCV------------KLLLQNGAD-------RTIHAPDGTALIEATE 108 (117)
T ss_pred -----CCccccCCcHHHHHHHHhhHHHH------------HHHHHcCcc-------cceeCCCchhHHhhcc
Confidence 33666777777777777776554 222222222 3456677888776644
No 84
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.53 E-value=2.4e-07 Score=82.42 Aligned_cols=89 Identities=19% Similarity=0.131 Sum_probs=74.2
Q ss_pred CCCCccccccccccHHHHHHHHccCC-----hHHHHHHhhcCCC--CcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCC
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKD-----EQKVSELCRKVPD--HALYVFTIHDDTVLLMATYTKKSDLVIKLLDELP 75 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~-----~~~v~~lL~~~~~--~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p 75 (363)
..|.+.......+.++||.|+.. ++ .+ +++.+++... .....+|.+|.||||+|+..|+.++++.|++.++
T Consensus 94 ~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~~-~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~ 171 (235)
T COG0666 94 ASGADVNAKDADGDTPLHLAALN-GNPPEGNIE-VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGA 171 (235)
T ss_pred HcCCCcccccCCCCcHHHHHHhc-CCcccchHH-HHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCC
Confidence 34667777788899999999998 77 55 5555555454 4667779999999999999999999999999998
Q ss_pred CCchhhhhccCCCCCcHHHHHHh
Q 041634 76 DQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 76 ~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
+ .. .+|..|+|++|.|+.
T Consensus 172 ~-~~----~~~~~g~t~l~~a~~ 189 (235)
T COG0666 172 D-PN----SRNSYGVTALDPAAK 189 (235)
T ss_pred C-Cc----ccccCCCcchhhhcc
Confidence 8 44 579999999999987
No 85
>PF13606 Ank_3: Ankyrin repeat
Probab=98.43 E-value=2.4e-07 Score=57.69 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=25.9
Q ss_pred CCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 50 HDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 50 ~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
+|+||||+||+.|+.|+|++||++++|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 599999999999999999999999988
No 86
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.34 E-value=9e-07 Score=88.54 Aligned_cols=103 Identities=25% Similarity=0.269 Sum_probs=86.8
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
+...+..|+.. +|...+.+.-+. ++++-.++.+.++.||.|++.|+-|+|+++|+++|.++.+ ..|..|.|+||
T Consensus 866 iseeil~av~~-~D~~klqE~h~~--gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld---~~de~get~lh 939 (1004)
T KOG0782|consen 866 ISEEILRAVLS-SDLMKLQETHLN--GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLD---MADETGETALH 939 (1004)
T ss_pred ccHHHHHHHHh-ccHHHHHHHHhc--CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHH---HHhhhhhHHHH
Confidence 55678899988 888777776655 5667788899999999999999999999999999985555 88999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCccc
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDY 123 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~ 123 (363)
-|+. ++-+...|.+|.||-.-|-+.+.++
T Consensus 940 kaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~d 981 (1004)
T KOG0782|consen 940 KAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPD 981 (1004)
T ss_pred HHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCch
Confidence 9886 4566789999999998888777653
No 87
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.29 E-value=1.8e-06 Score=85.26 Aligned_cols=88 Identities=15% Similarity=-0.006 Sum_probs=65.4
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
..++++++||..+.. |+.+...++|.- +.+.+..+ .+|.||||+||+.|...-++.|+-.++| ..
T Consensus 129 ~~~~LsrQLhasvRt-~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~---------- 194 (669)
T KOG0818|consen 129 TAKDLSKQLHSSVRT-GNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PG---------- 194 (669)
T ss_pred hHHHHHHHHHHHhhc-ccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CC----------
Confidence 567789999999998 999988888876 34444333 4599999999999999999999988888 43
Q ss_pred CcHHHHHHhchhhccccCCCCcHHHHHHhhCcccCcc
Q 041634 90 NTIQHETATRRLVRKIDYNGNTILHMAGIKIKDYGSE 126 (363)
Q Consensus 90 ~t~LH~Aa~~~lin~~D~~GnT~LHlAa~~~~~~~~~ 126 (363)
++|.+|.||+.+|-..||.+..|
T Consensus 195 --------------a~d~~GmtP~~~AR~~gH~~lae 217 (669)
T KOG0818|consen 195 --------------AQDSSGMTPVDYARQGGHHELAE 217 (669)
T ss_pred --------------CCCCCCCcHHHHHHhcCchHHHH
Confidence 45556666666666666654443
No 88
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.29 E-value=1e-06 Score=55.88 Aligned_cols=27 Identities=30% Similarity=0.279 Sum_probs=26.0
Q ss_pred CCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 50 HDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 50 ~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
+|.||||+|++.|+.++++.|++++++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~ 27 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGAD 27 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCC
Confidence 599999999999999999999999988
No 89
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.27 E-value=1.6e-06 Score=67.90 Aligned_cols=74 Identities=18% Similarity=0.021 Sum_probs=58.8
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
....+||+|+-. |..+.+..++.. +.+++.+|+.|-|||..|+..||.+.|+.||+.++| -- .+-.+|.+.+
T Consensus 33 ggR~plhyAAD~-GQl~ilefli~i--GA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAd-rt----~~~PdG~~~~ 104 (117)
T KOG4214|consen 33 GGRTPLHYAADY-GQLSILEFLISI--GANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGAD-RT----IHAPDGTALI 104 (117)
T ss_pred CCcccchHhhhc-chHHHHHHHHHh--ccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcc-cc----eeCCCchhHH
Confidence 456899999976 776655444444 778999999999999999999999999999999998 33 3566776655
Q ss_pred HH
Q 041634 94 HE 95 (363)
Q Consensus 94 H~ 95 (363)
-.
T Consensus 105 ea 106 (117)
T KOG4214|consen 105 EA 106 (117)
T ss_pred hh
Confidence 43
No 90
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.17 E-value=2.5e-06 Score=85.16 Aligned_cols=76 Identities=17% Similarity=0.065 Sum_probs=67.1
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
.+||.++.. .+.+.+.+.++......++..|..|.||||+|+.-|+.+.++.|+..+++ .. .+|++|+|+||.|
T Consensus 22 ~~lh~~~~~-~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~----~kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVT-TDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VS----IKNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhc-cchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-cc----ccccccccHHHHH
Confidence 459999998 88888888777656677889999999999999999999999999999998 44 6899999999999
Q ss_pred Hh
Q 041634 97 AT 98 (363)
Q Consensus 97 a~ 98 (363)
+.
T Consensus 96 v~ 97 (560)
T KOG0522|consen 96 VS 97 (560)
T ss_pred HH
Confidence 97
No 91
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.16 E-value=2.8e-06 Score=84.54 Aligned_cols=78 Identities=13% Similarity=-0.021 Sum_probs=63.0
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
++...+-++||.|+.. |+.++|.-|+.. +.+++..|.+|+||||.||.-+++-+++.|++.++. +.. ..-.++
T Consensus 578 qpNdEGITaLHNAiCa-ghyeIVkFLi~~--ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaa-vfA---sTlSDm 650 (752)
T KOG0515|consen 578 QPNDEGITALHNAICA-GHYEIVKFLIEF--GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAA-VFA---STLSDM 650 (752)
T ss_pred CCCccchhHHhhhhhc-chhHHHHHHHhc--CCcccCccCCCCchhhhhhhcCchHHHHHHHhccce-EEe---eecccc
Confidence 4455677899999997 888866555544 789999999999999999999999999999999987 433 455667
Q ss_pred CcHHH
Q 041634 90 NTIQH 94 (363)
Q Consensus 90 ~t~LH 94 (363)
.|+.-
T Consensus 651 eTa~e 655 (752)
T KOG0515|consen 651 ETAAE 655 (752)
T ss_pred cchhh
Confidence 77654
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.02 E-value=4.1e-06 Score=82.52 Aligned_cols=81 Identities=19% Similarity=0.030 Sum_probs=67.3
Q ss_pred HHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHH
Q 041634 18 ELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETA 97 (363)
Q Consensus 18 ~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa 97 (363)
.+.+|+.. ||...+.++.+. +.+++..|-+.+|+||+||..|+++++++||+.+.. ..
T Consensus 509 ~~~~aa~~-GD~~alrRf~l~--g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv-~~------------------ 566 (622)
T KOG0506|consen 509 NVMYAAKN-GDLSALRRFALQ--GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKV-DP------------------ 566 (622)
T ss_pred hhhhhhhc-CCHHHHHHHHHh--cccccccccccchhheeecccCceeHHHHHHHHHcC-CC------------------
Confidence 58889998 999999999987 778999999999999999999999999999998654 22
Q ss_pred hchhhccccCCCCcHHHHHHhhCcccCc
Q 041634 98 TRRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 98 ~~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+.+|.-|||||.-|...+|.+++
T Consensus 567 -----~~kDRw~rtPlDdA~~F~h~~v~ 589 (622)
T KOG0506|consen 567 -----DPKDRWGRTPLDDAKHFKHKEVV 589 (622)
T ss_pred -----ChhhccCCCcchHhHhcCcHHHH
Confidence 44667778888888877775543
No 93
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.87 E-value=3.1e-05 Score=72.26 Aligned_cols=82 Identities=20% Similarity=0.056 Sum_probs=66.6
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCccc-ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALY-VFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNK 87 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~-~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~ 87 (363)
+..+..+.++|-+|+.+ |+.+ +++++++.. .+++ .++..+.||||.||-.|+.++.+.|++.+.. .. .+|.
T Consensus 39 n~~D~sGMs~LahAayk-Gnl~-~v~lll~~g-aDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~-~~----~vNs 110 (396)
T KOG1710|consen 39 NQRDPSGMSVLAHAAYK-GNLT-LVELLLELG-ADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGAR-MY----LVNS 110 (396)
T ss_pred hccCCCcccHHHHHHhc-CcHH-HHHHHHHhC-CCcCcccccccccHHHHHHHcCCchHHHHHHhccCc-cc----cccc
Confidence 34455677899999998 9987 556666643 4444 5677799999999999999999999999977 33 7899
Q ss_pred CCCcHHHHHHh
Q 041634 88 AGNTIQHETAT 98 (363)
Q Consensus 88 ~G~t~LH~Aa~ 98 (363)
-|+|+-..|+.
T Consensus 111 vgrTAaqmAAF 121 (396)
T KOG1710|consen 111 VGRTAAQMAAF 121 (396)
T ss_pred hhhhHHHHHHH
Confidence 99999999997
No 94
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.82 E-value=8.5e-06 Score=87.16 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=64.9
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
..+.+.|-.|+.. |+.+ .++++.. ++.+++.+|++|.+||.+|+-.||..+|+.|+++..+ +-. ..|+.+.|+
T Consensus 755 ~n~~t~LT~acag-gh~e-~vellv~-rganiehrdkkgf~plImaatagh~tvV~~llk~ha~-vea---Qsdrtkdt~ 827 (2131)
T KOG4369|consen 755 PNIKTNLTSACAG-GHRE-EVELLVV-RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHAD-VEA---QSDRTKDTM 827 (2131)
T ss_pred ccccccccccccC-ccHH-HHHHHHH-hcccccccccccchhhhhhcccCchHHHHHHHhhhhh-hhh---hcccccCce
Confidence 3456778888864 5555 5566555 4788999999999999999999999999999999998 554 789999999
Q ss_pred HHHHHh
Q 041634 93 QHETAT 98 (363)
Q Consensus 93 LH~Aa~ 98 (363)
|-+||.
T Consensus 828 lSlacs 833 (2131)
T KOG4369|consen 828 LSLACS 833 (2131)
T ss_pred EEEecC
Confidence 999885
No 95
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.68 E-value=6.3e-05 Score=75.84 Aligned_cols=80 Identities=16% Similarity=0.047 Sum_probs=58.4
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCccc--ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALY--VFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~--~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
..+-++|..|+.. .|...+.-||.......++ ..+.+|+|+||+||+.|++.+.+.|+=++.| .. .+|.+|+
T Consensus 622 ~~lgqqLl~A~~~-~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~----~rda~g~ 695 (749)
T KOG0705|consen 622 EPLGQQLLRAVAA-EDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VM----ARDAHGR 695 (749)
T ss_pred CchHHHHHHHHHH-HHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ce----ecccCCc
Confidence 3456789999987 7777666666553333333 4577789999999999999999999988888 43 4566666
Q ss_pred cHHHHHHh
Q 041634 91 TIQHETAT 98 (363)
Q Consensus 91 t~LH~Aa~ 98 (363)
|+|.||-.
T Consensus 696 t~l~yar~ 703 (749)
T KOG0705|consen 696 TALFYARQ 703 (749)
T ss_pred hhhhhHhh
Confidence 66666543
No 96
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.65 E-value=1.8e-05 Score=84.73 Aligned_cols=112 Identities=19% Similarity=-0.015 Sum_probs=85.6
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchh-------------
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLD------------- 80 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~------------- 80 (363)
..|++|-.|+.. |..+ ++.+|+. ...+++.+-+.|.|||+-+|..|++|+=+.||..++| .+.
T Consensus 925 NrnTaltla~fq-gr~e-vv~lLLa-~~anvehRaktgltplme~AsgGyvdvg~~li~~gad-~nasPvp~T~dtalti 1000 (2131)
T KOG4369|consen 925 NRNTALTLALFQ-GRPE-VVFLLLA-AQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGAD-TNASPVPNTWDTALTI 1000 (2131)
T ss_pred ccccceeecccc-Ccch-HHHHHHH-HhhhhhhhcccCCcccchhhcCCccccchhhhhcccc-cccCCCCCcCCcccee
Confidence 356778888876 7655 6666665 3567777888899999999999999988888888877 322
Q ss_pred ------------------hhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccC
Q 041634 81 ------------------KMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKME 129 (363)
Q Consensus 81 ------------------~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~ 129 (363)
....+|++|.|+|..|+. ..+.+.+|+.-||++.-|.++||..++..+.
T Consensus 1001 ~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1001 PANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred ecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheecccc
Confidence 223678888888888886 4567888999999999888998888775543
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.63 E-value=3.8e-05 Score=80.27 Aligned_cols=89 Identities=19% Similarity=0.185 Sum_probs=70.8
Q ss_pred CChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC-CCCCcHHHHHHh-------
Q 041634 27 KDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTIQHETAT------- 98 (363)
Q Consensus 27 g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d-~~G~t~LH~Aa~------- 98 (363)
+....+...+.+......++.|..|+|+||+|+..|..++++.||+++.| +. .+| ..|+||||-|+.
T Consensus 28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~----vqD~ESG~taLHRaiyyG~idca 102 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VF----VQDEESGYTALHRAIYYGNIDCA 102 (1267)
T ss_pred CChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce-ee----eccccccchHhhHhhhhchHHHH
Confidence 33334666777766666788899999999999999999999999999988 44 345 579999999887
Q ss_pred ------chhhccccCCCCcHHHHHHhhC
Q 041634 99 ------RRLVRKIDYNGNTILHMAGIKI 120 (363)
Q Consensus 99 ------~~lin~~D~~GnT~LHlAa~~~ 120 (363)
++-+..+|++|..||.+..+-.
T Consensus 103 ~lLL~~g~SL~i~Dkeglsplq~~~r~~ 130 (1267)
T KOG0783|consen 103 SLLLSKGRSLRIKDKEGLSPLQFLSRVL 130 (1267)
T ss_pred HHHHhcCCceEEecccCCCHHHHHhhcc
Confidence 4556788999999999888743
No 98
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.45 E-value=0.00025 Score=76.22 Aligned_cols=79 Identities=19% Similarity=0.132 Sum_probs=64.2
Q ss_pred CcccccCcCCCcHHhHHHhcCcHHHHHHHHHh-CCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccC
Q 041634 42 HALYVFTIHDDTVLLMATYTKKSDLVIKLLDE-LPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDY 107 (363)
Q Consensus 42 ~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~-~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~ 107 (363)
.......-.|.+-+|+++..|+.-.++.+++- +-. .. ..|.+|+..+|+++. +.-++.+|.
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~-~~----eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~ 639 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG-DL----ELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDR 639 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccC-ch----hhcccCCChhhHhhhcCCceeEEEEeecccccccccC
Confidence 33444566799999999999999999999995 332 22 468999999999665 456789999
Q ss_pred CCCcHHHHHHhhCcccCc
Q 041634 108 NGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 108 ~GnT~LHlAa~~~~~~~~ 125 (363)
+|+||||+|+..|+...+
T Consensus 640 ~G~tpL~wAa~~G~e~l~ 657 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGREKLV 657 (975)
T ss_pred CCCcccchHhhcCHHHHH
Confidence 999999999999986544
No 99
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.14 E-value=0.00042 Score=72.75 Aligned_cols=76 Identities=17% Similarity=0.053 Sum_probs=63.0
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcC-CCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIH-DDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~-G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
+.++||.++.. +... +++.|+.+ +.++..+|.+ |.||||-|...|+.|.+..||+++.. .+ ++|++|.+||
T Consensus 52 GR~alH~~~S~-~k~~-~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S--L~---i~Dkeglspl 123 (1267)
T KOG0783|consen 52 GRTALHIAVSE-NKNS-FLRWLLQH-GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS--LR---IKDKEGLSPL 123 (1267)
T ss_pred ccceeeeeecc-chhH-HHHHHHhc-CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc--eE---EecccCCCHH
Confidence 55789999976 6555 55555553 7888888876 99999999999999999999999976 34 8999999999
Q ss_pred HHHHh
Q 041634 94 HETAT 98 (363)
Q Consensus 94 H~Aa~ 98 (363)
..-++
T Consensus 124 q~~~r 128 (1267)
T KOG0783|consen 124 QFLSR 128 (1267)
T ss_pred HHHhh
Confidence 98776
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.06 E-value=0.00066 Score=68.54 Aligned_cols=76 Identities=18% Similarity=0.136 Sum_probs=66.6
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
+-||||+.. |+-+.|..+|...+...++..|..|.|+||-||..|+..+.++|++.++. .. ..|.+|.||-.-|
T Consensus 901 sllh~a~~t-g~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas-l~----ktd~kg~tp~era 974 (1004)
T KOG0782|consen 901 SLLHYAAKT-GNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS-LR----KTDSKGKTPQERA 974 (1004)
T ss_pred hHHHHHHhc-CChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh-he----ecccCCCChHHHH
Confidence 579999998 99887888877777777888999999999999999999999999999987 43 6899999998887
Q ss_pred Hh
Q 041634 97 AT 98 (363)
Q Consensus 97 a~ 98 (363)
-+
T Consensus 975 qq 976 (1004)
T KOG0782|consen 975 QQ 976 (1004)
T ss_pred Hh
Confidence 44
No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.06 E-value=0.00025 Score=70.17 Aligned_cols=47 Identities=11% Similarity=-0.041 Sum_probs=37.7
Q ss_pred cCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 47 FTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 47 ~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
++.++.-+++.||+.|.+..++.+.-.+.| .. .+|.+.||+||+||.
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~----~~DyD~RTaLHvAAa 548 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMD-LE----TKDYDDRTALHVAAA 548 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhccc-cc----ccccccchhheeecc
Confidence 345677899999999999999988888887 33 677778888887776
No 102
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.72 E-value=0.0018 Score=69.66 Aligned_cols=71 Identities=21% Similarity=0.077 Sum_probs=62.1
Q ss_pred cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHH
Q 041634 49 IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHM 115 (363)
Q Consensus 49 ~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHl 115 (363)
..|.|+||.|+..|..-+++.|++.+.+ +. .+|..|+||||.+.. ++..++-|.+|.+||+.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn----~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VN----ALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDI 728 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCc-ch----hhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhH
Confidence 3479999999999999999999999998 55 699999999999997 56678899999999999
Q ss_pred HHhhCcccC
Q 041634 116 AGIKIKDYG 124 (363)
Q Consensus 116 Aa~~~~~~~ 124 (363)
|....+.++
T Consensus 729 a~~~~~~d~ 737 (785)
T KOG0521|consen 729 AMEAANADI 737 (785)
T ss_pred HhhhccccH
Confidence 987755544
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=96.69 E-value=0.00074 Score=42.53 Aligned_cols=18 Identities=33% Similarity=0.244 Sum_probs=15.6
Q ss_pred CCCcHHHHHHhhCcccCc
Q 041634 108 NGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 108 ~GnT~LHlAa~~~~~~~~ 125 (363)
+|+||||+|+..++.+++
T Consensus 1 dG~TpLh~A~~~~~~~~v 18 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIV 18 (33)
T ss_dssp TSBBHHHHHHHTTCHHHH
T ss_pred CcccHHHHHHHHHHHHHH
Confidence 699999999999987654
No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.66 E-value=0.0031 Score=63.50 Aligned_cols=60 Identities=13% Similarity=0.038 Sum_probs=52.5
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
..+++||.|+.. |+...+..++.. ++++..+|++|++|||-|+..|+.+++..++.+.-.
T Consensus 54 ~g~TpLhlAV~L-g~~~~a~~Ll~a--~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~~ 113 (560)
T KOG0522|consen 54 PGRTPLHLAVRL-GHVEAARILLSA--GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHLKY 113 (560)
T ss_pred CCCccHHHHHHh-cCHHHHHHHHhc--CCCccccccccccHHHHHHHcCCHHHHHHHHHHhHH
Confidence 358999999998 998877777665 677889999999999999999999999999988655
No 105
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.46 E-value=0.0042 Score=35.74 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.9
Q ss_pred CCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 50 HDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 50 ~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
+|.||+|+|+..|+.++++.|++.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 478999999999999999999998776
No 106
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=96.29 E-value=0.005 Score=54.59 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=40.7
Q ss_pred CCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 41 DHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 41 ~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
+.+++.+|..|+|||+.||..|..+.|.+|+.++.. -.. ..|..|.+++.+|-+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a-~vg---v~d~ssldaaqlaek 55 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVA-FVG---VTDESSLDAAQLAEK 55 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcc-ccc---ccccccchHHHHHHh
Confidence 356777888888888888888888888888888733 233 678888888877766
No 107
>PF13606 Ank_3: Ankyrin repeat
Probab=96.11 E-value=0.0015 Score=40.44 Aligned_cols=18 Identities=39% Similarity=0.244 Sum_probs=15.6
Q ss_pred CCCcHHHHHHhhCcccCc
Q 041634 108 NGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 108 ~GnT~LHlAa~~~~~~~~ 125 (363)
+|+||||+|++.|+.+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v 18 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIV 18 (30)
T ss_pred CCCCHHHHHHHhCCHHHH
Confidence 699999999999987655
No 108
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=96.02 E-value=0.01 Score=59.43 Aligned_cols=60 Identities=15% Similarity=-0.066 Sum_probs=50.9
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHh
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDE 73 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~ 73 (363)
+-++++++||.|+.. |+...+.-|+.. +.+...+|.+|+||+-+|-..||-++.+.|++.
T Consensus 163 hpekg~TpLHvAAk~-Gq~~Q~ElL~vY--GAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 163 HPEKGNTPLHVAAKA-GQILQAELLAVY--GADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CcccCCchhHHHHhc-cchhhhhHHhhc--cCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 557799999999998 887766555544 788999999999999999999999988887764
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.79 E-value=0.027 Score=54.84 Aligned_cols=60 Identities=22% Similarity=0.180 Sum_probs=54.4
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCch
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSL 79 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~ 79 (363)
+..|.+|+.. ||.+.|..++. -+.+++..|.-...||.+|+--||.++|+.||+.++- |-
T Consensus 37 f~elceacR~-GD~d~v~~LVe--tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~ 96 (516)
T KOG0511|consen 37 FGELCEACRA-GDVDRVRYLVE--TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CS 96 (516)
T ss_pred hHHHHHHhhc-ccHHHHHHHHH--hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc-cc
Confidence 6789999998 99998887776 4889999999999999999999999999999999986 54
No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.78 E-value=0.0074 Score=64.98 Aligned_cols=88 Identities=18% Similarity=0.080 Sum_probs=69.7
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHH
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHE 95 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~ 95 (363)
-+.||.|+.. |+.. .+++++. .+.+++..|..|.+|||.+...|+...+..+++++++ .. ..|.+|+++|++
T Consensus 657 ~s~lh~a~~~-~~~~-~~e~ll~-~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~----a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 657 CSLLHVAVGT-GDSG-AVELLLQ-NGADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD-PN----AFDPDGKLPLDI 728 (785)
T ss_pred cchhhhhhcc-chHH-HHHHHHh-cCCcchhhhccCCCcchhhhhhcccchhhhhcccccc-cc----ccCccCcchhhH
Confidence 4689999976 6555 6666666 3566999999999999999999999999999999887 44 679999999999
Q ss_pred HHhchhhccccCCCCcHHHHH
Q 041634 96 TATRRLVRKIDYNGNTILHMA 116 (363)
Q Consensus 96 Aa~~~lin~~D~~GnT~LHlA 116 (363)
|.+. .+.+.-|.|-++
T Consensus 729 a~~~-----~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 729 AMEA-----ANADIVLLLRLA 744 (785)
T ss_pred Hhhh-----ccccHHHHHhhh
Confidence 9661 334455555555
No 111
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=95.45 E-value=0.022 Score=58.00 Aligned_cols=63 Identities=17% Similarity=0.060 Sum_probs=54.0
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhC-CC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDEL-PD 76 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~-p~ 76 (363)
.+-++.++||.|+.. |+.. +.+||. ..+.++..+|.+|.|+|.+|-+.|..|++..|+.++ |+
T Consensus 657 ~~~~grt~LHLa~~~-gnVv-l~QLLi-Wyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 657 GEGDGRTALHLAARK-GNVV-LAQLLI-WYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred cCCCCcchhhhhhhh-cchh-HHHHHH-HhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 445567999999997 8866 666666 478899999999999999999999999999999985 55
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.35 E-value=0.0085 Score=64.75 Aligned_cols=104 Identities=11% Similarity=-0.100 Sum_probs=64.2
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
.+.-+|.++-. +... +.+-+.+..+..-...|.+|+-.+|+ |..|+.+..-+++..... .++ .+|..||||||
T Consensus 574 ~~lllhL~a~~-lyaw-Lie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~-ai~---i~D~~G~tpL~ 646 (975)
T KOG0520|consen 574 DMLLLHLLAEL-LYAW-LIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGV-AID---IRDRNGWTPLH 646 (975)
T ss_pred chHHHHHHHHH-hHHH-HHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccc-ccc---cccCCCCcccc
Confidence 34566777755 4433 44444442233334556667777777 666666776667766655 444 77888888888
Q ss_pred HHHh-----------------c--hhhccccCCCCcHHHHHHhhCcccCc
Q 041634 95 ETAT-----------------R--RLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 95 ~Aa~-----------------~--~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|+. + ...+..+-.|-|+--+|-.+|+..+.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia 696 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIA 696 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchH
Confidence 8876 0 11234455788888888888876554
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.47 E-value=0.06 Score=57.30 Aligned_cols=95 Identities=14% Similarity=-0.099 Sum_probs=70.9
Q ss_pred HHHHHHHccCChHHHHHHhhcCCC--CcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHH
Q 041634 18 ELYNALMIKKDEQKVSELCRKVPD--HALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHE 95 (363)
Q Consensus 18 ~Lh~A~~~~g~~~~v~~lL~~~~~--~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~ 95 (363)
.-..|+.. ||...|.+.+.+... .++++.|.=|+++||+|..+-+.|+++.|+++.-+ . ..+|.+
T Consensus 28 ~fL~a~E~-gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~-------~-----gdALL~ 94 (822)
T KOG3609|consen 28 GFLLAHEN-GDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE-------E-----GDALLL 94 (822)
T ss_pred HHHHHHHc-CChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc-------c-----chHHHH
Confidence 34566666 999999999988665 66778999999999999999999999999997443 2 456666
Q ss_pred HHh-------chhhcc----------------ccCCCCcHHHHHHhhCcccCc
Q 041634 96 TAT-------RRLVRK----------------IDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 96 Aa~-------~~lin~----------------~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|+. +.+++. .=..+-|||.+||..++.+++
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil 147 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEIL 147 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHH
Confidence 665 112211 123567999999988776654
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.13 E-value=0.11 Score=52.43 Aligned_cols=44 Identities=25% Similarity=0.150 Sum_probs=38.6
Q ss_pred CCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 50 HDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 50 ~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
.-.|+||+|+..|..++|.++|+.+.| .. .+|..|+||..++..
T Consensus 429 ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~----~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 429 LTSTFLHYAAAQGARKCVKYFLEEGCD-PS----TKDGAGRTPYSLSAN 472 (591)
T ss_pred ccchHHHHHHhcchHHHHHHHHHhcCC-ch----hcccCCCCccccccc
Confidence 367999999999999999999999977 44 689999999988764
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=87.89 E-value=3 Score=44.85 Aligned_cols=58 Identities=21% Similarity=0.088 Sum_probs=41.6
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCccc---------ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALY---------VFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~---------~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
.+|.+|+.. |..+ .+++++.++..... ..-..+-|||.+||...+.||++.||+++..
T Consensus 90 dALL~aI~~-~~v~-~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 90 DALLLAIAV-GSVP-LVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC 156 (822)
T ss_pred hHHHHHHHH-HHHH-HHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence 578888876 6665 55555554443211 1233478999999999999999999998765
No 116
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=85.70 E-value=3 Score=37.40 Aligned_cols=60 Identities=12% Similarity=-0.075 Sum_probs=50.2
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
.=++|..|+++ |..+ ++.+|+......+...|..|.+++-+|-+.|+.++|+.|.+..-+
T Consensus 12 gWTalmcaa~e-g~~e-avsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 12 GWTALMCAAME-GSNE-AVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred cchHHHHHhhh-cchh-HHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 44899999998 8877 455555545578889999999999999999999999999998655
No 117
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=70.67 E-value=64 Score=28.43 Aligned_cols=30 Identities=20% Similarity=0.115 Sum_probs=20.5
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041634 214 LINHLFFVAFTVSDVLSLTFSLAAVVPFLS 243 (363)
Q Consensus 214 l~~~~~F~~F~i~d~iA~~~S~~a~~~fl~ 243 (363)
+.....+..|.++=..+..+++++.++|.-
T Consensus 40 Ls~~qR~~~F~~cl~~gv~c~~l~~~lf~v 69 (175)
T KOG2887|consen 40 LSRTQRIMGFGICLAGGVLCFLLAMVLFPV 69 (175)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444556677777777777777777776643
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=69.92 E-value=5.4 Score=40.59 Aligned_cols=50 Identities=10% Similarity=-0.042 Sum_probs=39.6
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHH
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLL 71 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL 71 (363)
.++||+|+.+ |+.+.|..+|.+ ..+....|..|.||-.+++ +.|+-..++
T Consensus 431 sT~LH~aa~q-g~~k~v~~~Lee--g~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 431 STFLHYAAAQ-GARKCVKYFLEE--GCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred chHHHHHHhc-chHHHHHHHHHh--cCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 3799999998 998888888877 3677788999999999987 455555555
No 119
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=68.32 E-value=18 Score=32.11 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhccCCccc
Q 041634 222 AFTVSDVLSLTFSLAAVVP-FLSMLTSPFR 250 (363)
Q Consensus 222 ~F~i~d~iA~~~S~~a~~~-fl~il~s~~~ 250 (363)
-|.++|.+|..+.+.++.. ...|+-||+.
T Consensus 39 eY~vsNiisv~Sgll~I~~GI~AIvlSrnl 68 (188)
T PF12304_consen 39 EYAVSNIISVTSGLLSIICGIVAIVLSRNL 68 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHhHHHHhhhccC
Confidence 4689999999999988776 4567777644
No 120
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=63.53 E-value=14 Score=26.50 Aligned_cols=40 Identities=18% Similarity=0.307 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC---chhHHHHHHHHHHHHHH
Q 041634 269 LLLSVCLMMVAFIATILLMIKSE---ESWAKIMLYTCTFIPVG 308 (363)
Q Consensus 269 l~~s~~~m~~aF~~~~~~v~~~~---~~w~~i~i~~~~~~~~~ 308 (363)
+|+|..+|..=|.+.+.+.+.+. .+|....+..+|++...
T Consensus 2 MWiS~~~iglMfisv~~i~~sR~Klk~~~lk~i~~~vAy~lli 44 (58)
T PF10966_consen 2 MWISFGAIGLMFISVILIYFSRYKLKGKFLKFIVSLVAYILLI 44 (58)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 47888898888888888888752 45888888888875543
No 121
>PTZ00370 STEVOR; Provisional
Probab=62.76 E-value=9.7 Score=36.18 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhhhHHHHHhh
Q 041634 305 IPVGVFALSYFPLYITKSVT 324 (363)
Q Consensus 305 ~~~~~~~~~~~~l~~~~~~~ 324 (363)
+-++++++.-.-||+-+.+|
T Consensus 262 lvllil~vvliilYiwlyrr 281 (296)
T PTZ00370 262 LVLLILAVVLIILYIWLYRR 281 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33344444445556665555
No 122
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=59.70 E-value=38 Score=27.65 Aligned_cols=51 Identities=10% Similarity=0.296 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 041634 263 ILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFPLYIT 320 (363)
Q Consensus 263 ~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~ 320 (363)
.||+.+.|+++.-|.+. ++ .. ..+|+.....++|++.+......+|.....
T Consensus 13 ~~al~lif~g~~vmy~g----i~--f~-~~~~im~ifmllG~L~~l~S~~VYfwIGml 63 (114)
T PF11023_consen 13 TFALSLIFIGMIVMYIG----IF--FK-ASPIIMVIFMLLGLLAILASTAVYFWIGML 63 (114)
T ss_pred HHHHHHHHHHHHHHhhh----hh--hc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 48888889998888764 22 23 457888888888888777766666665444
No 123
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=57.13 E-value=9.4 Score=36.20 Aligned_cols=8 Identities=25% Similarity=0.372 Sum_probs=6.4
Q ss_pred CCCcceec
Q 041634 349 SSNSFKVK 356 (363)
Q Consensus 349 ~~~~~~~~ 356 (363)
+|+||+|.
T Consensus 286 RK~swkhe 293 (295)
T TIGR01478 286 RKKSWKHE 293 (295)
T ss_pred hccccccc
Confidence 78899874
No 124
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=56.94 E-value=20 Score=35.54 Aligned_cols=42 Identities=12% Similarity=-0.092 Sum_probs=36.8
Q ss_pred CcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh
Q 041634 52 DTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT 98 (363)
Q Consensus 52 ~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~ 98 (363)
.--|..||+.|.++.|+.|++.+-+ ++ .+|+-..+||.+|..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-VN----~vD~fD~spL~lAsL 78 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-VN----AVDRFDSSPLYLASL 78 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-cc----hhhcccccHHHHHHH
Confidence 4468999999999999999998877 55 689999999999886
No 125
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=53.33 E-value=1.7e+02 Score=26.26 Aligned_cols=11 Identities=36% Similarity=0.579 Sum_probs=8.8
Q ss_pred CCCCCHHHHHH
Q 041634 159 NMGFTPEELFA 169 (363)
Q Consensus 159 ~~G~Tp~dl~~ 169 (363)
++|+||+|+|-
T Consensus 43 k~G~tA~~lfG 53 (206)
T PF06570_consen 43 KKGKTARQLFG 53 (206)
T ss_pred hCCCcHHHHcC
Confidence 56888888876
No 126
>PRK02935 hypothetical protein; Provisional
Probab=50.72 E-value=86 Score=25.33 Aligned_cols=47 Identities=13% Similarity=0.290 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 041634 263 ILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFP 316 (363)
Q Consensus 263 ~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~ 316 (363)
.||+.+.|+++.-|.+... . +.++|+.....++|++.+..=...+|.
T Consensus 14 t~aL~lvfiG~~vMy~Gif----f---~~~~~~m~ifm~~G~l~~l~S~vvYFw 60 (110)
T PRK02935 14 TFALSLVFIGFIVMYLGIF----F---RESIIIMTIFMLLGFLAVIASTVVYFW 60 (110)
T ss_pred HHHHHHHHHHHHHHHHHHH----h---cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4888999999888877622 1 455677766777776665544334443
No 127
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=49.92 E-value=33 Score=25.55 Aligned_cols=48 Identities=15% Similarity=0.141 Sum_probs=35.7
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhC
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDEL 74 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~ 74 (363)
+.+..|+.. |+.+.+..++.. .. . ....+..|.+.-+.|+++.|++..
T Consensus 8 ~tl~~Ai~G-GN~eII~~c~~~-~~-----~---~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIG-GNFEIINICLKK-NK-----P---DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhC-CCHHHHHHHHHH-hc-----c---HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 467888886 888866666643 21 1 145799999999999999999975
No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=45.86 E-value=13 Score=33.53 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=10.2
Q ss_pred cCCCcHHhHHHhcCcHHHHH
Q 041634 49 IHDDTVLLMATYTKKSDLVI 68 (363)
Q Consensus 49 ~~G~TpLh~Aa~~G~~eiV~ 68 (363)
.+-..|||-|.+-|..+++-
T Consensus 220 ~kTe~~LHk~iki~REDVl~ 239 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLF 239 (280)
T ss_pred CCCcchhHHhhhccccceee
Confidence 33444555555555555443
No 129
>PF10658 DUF2484: Protein of unknown function (DUF2484); InterPro: IPR018919 A role of this family in UDP-N-acetylenolpyruvoylglucosamine reductase, as MurB, could not be confirmed.
Probab=43.14 E-value=1.2e+02 Score=23.13 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCC-chhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 041634 277 MVAFIATILLMIKSE-ESWAKIMLYTCTFIPVGVFALSYFPLYIT 320 (363)
Q Consensus 277 ~~aF~~~~~~v~~~~-~~w~~i~i~~~~~~~~~~~~~~~~~l~~~ 320 (363)
.-.++|.+..++|.+ .+|..-.+.+...+|++.+...|.--+.-
T Consensus 10 lWvv~A~~~AmLP~rd~hw~~a~~Lia~g~pLlg~v~~~~Gp~~g 54 (77)
T PF10658_consen 10 LWVVAANVVAMLPSRDNHWRPAYVLIAAGIPLLGWVTYQNGPWWG 54 (77)
T ss_pred HHHHHHHHHHHcCchhhcchhHHHHHHHHhhHhhhhHhhhChHHH
Confidence 345667777788877 78988777777779988887766655443
No 130
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=42.15 E-value=1.4e+02 Score=25.62 Aligned_cols=46 Identities=20% Similarity=0.374 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHH
Q 041634 260 NKMILGFTFLLLSVCLMMVAFIATILLMIK-SEESWAKIMLYTCTFI 305 (363)
Q Consensus 260 ~~l~~~~~~l~~s~~~m~~aF~~~~~~v~~-~~~~w~~i~i~~~~~~ 305 (363)
+++..+-.+-.+|+....+||..|+.+... +..+|+..+..+++.+
T Consensus 60 ~~f~aa~afaIisi~~~~~a~v~g~~~l~~~~~~r~v~l~L~~~~~~ 106 (155)
T PF07344_consen 60 SRFRAAQAFAIISIFVYGAAFVLGVLLLCCCSCLRWVCLVLNIVGIV 106 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 456677788888998889999999998888 5678877666555543
No 131
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=38.89 E-value=79 Score=29.36 Aligned_cols=58 Identities=21% Similarity=-0.010 Sum_probs=36.3
Q ss_pred HHHHHHccCChHHHHHHhhcCCCCccc---ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 19 LYNALMIKKDEQKVSELCRKVPDHALY---VFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 19 Lh~A~~~~g~~~~v~~lL~~~~~~~~~---~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
+-|+..+.|....+.+-+++.+-.+++ ++-+.|+|-|--|.+.|+.|++..||+.++-
T Consensus 219 ieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 219 IEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 444444333344455555543333333 3456688888888888888888888888763
No 132
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=38.03 E-value=1.1e+02 Score=27.24 Aligned_cols=49 Identities=22% Similarity=0.320 Sum_probs=32.3
Q ss_pred HHHHHHHHHhccCCcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 041634 234 SLAAVVPFLSMLTSPFRLEDCKHSLPNKMILGFTFLLLSVCLMMVAFIATILLMIKS 290 (363)
Q Consensus 234 S~~a~~~fl~il~s~~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~aF~~~~~~v~~~ 290 (363)
|++.+++|.-.++++ .+-.-+|++...+++.+-+.++|+|+++-++-+.
T Consensus 64 ~LiglIlFVLAl~s~--------p~ialimi~iAs~llP~PsLVIaYCl~mqi~~~~ 112 (189)
T PF05313_consen 64 SLIGLILFVLALTST--------PLIALIMIIIASLLLPFPSLVIAYCLSMQIYNPG 112 (189)
T ss_pred HHHHHHHHHHhccCc--------cHHHHHHHHHHHHHcCccHHHHHHHHHheeecCC
Confidence 566666665544432 1112367777777888888899999988776554
No 133
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=35.00 E-value=2.8e+02 Score=26.65 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhc-----cC---CchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhccchhhHHhHhhhhhhhh
Q 041634 271 LSVCLMMVAFIATILLMI-----KS---EESWAKIMLYTCTFIPVGVFALSYFPLYITKSVTRGLNYLRDKAKIFLPQWL 342 (363)
Q Consensus 271 ~s~~~m~~aF~~~~~~v~-----~~---~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (363)
+++..+.++|..++|+++ +. ...|..++..++.+..+.+++++-.--|+.- ++...++-..|-.
T Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~l~~lG~igeyi~~--------i~~~~~~rp~y~v 308 (325)
T PRK10714 237 LGSIIAIGGFSLAVLLVVLRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGR--------IYNDVRARPRYFV 308 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhccCCcEEE
Confidence 334444445555555443 22 1346655444444444444444444333332 2223333223333
Q ss_pred hccccCCCCcce
Q 041634 343 VNIFCFSSNSFK 354 (363)
Q Consensus 343 ~~~~~~~~~~~~ 354 (363)
+.-.+.+|.|-.
T Consensus 309 ~~~~~~~~~~~~ 320 (325)
T PRK10714 309 QQVVRPSSTSNN 320 (325)
T ss_pred EEEecCCCCccc
Confidence 555666665543
No 134
>PF06610 DUF1144: Protein of unknown function (DUF1144); InterPro: IPR010574 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=33.22 E-value=1.7e+02 Score=24.87 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Q 041634 224 TVSDVLSLTFSLAAVVPFLSMLTS 247 (363)
Q Consensus 224 ~i~d~iA~~~S~~a~~~fl~il~s 247 (363)
.++||+||+.=.+.+-+++=++.|
T Consensus 12 a~ADTfAmVvf~~v~gm~iEifis 35 (143)
T PF06610_consen 12 AAADTFAMVVFCFVTGMLIEIFIS 35 (143)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHc
Confidence 578999987655555555433333
No 135
>PF04304 DUF454: Protein of unknown function (DUF454); InterPro: IPR007401 This is a predicted membrane protein.
Probab=31.90 E-value=1.4e+02 Score=21.68 Aligned_cols=41 Identities=15% Similarity=0.409 Sum_probs=24.4
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHH
Q 041634 255 KHSLPNKMILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCT 303 (363)
Q Consensus 255 ~~~l~~~l~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~ 303 (363)
.+.+|+|-.+ .++.+|.+.+..+.+.+.++ .|..+++.++.
T Consensus 21 ~r~i~~k~K~------~a~~~m~~~~~~s~~~~~~~--~~~~~~l~~~~ 61 (71)
T PF04304_consen 21 HRGIPRKAKI------RALLMMWLSMGISAFFFVPN--LWVRIVLAAIL 61 (71)
T ss_pred CCCcCHHHHH------HHHHHHHHHHHHHHHHHccH--HHHHHHHHHHH
Confidence 3456665543 56677777777775555554 46666555444
No 136
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=31.19 E-value=37 Score=30.81 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=9.1
Q ss_pred hhccccCCCCcHHHHHH
Q 041634 101 LVRKIDYNGNTILHMAG 117 (363)
Q Consensus 101 lin~~D~~GnT~LHlAa 117 (363)
.+|..|-+|..+|.+|-
T Consensus 252 ~LNd~D~nG~~ALdiAL 268 (280)
T KOG4591|consen 252 ILNDADHNGALALDIAL 268 (280)
T ss_pred cccccCCCchHHHHHHH
Confidence 44555555555555553
No 137
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=31.14 E-value=5.3e+02 Score=26.77 Aligned_cols=52 Identities=13% Similarity=0.404 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHH-HHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 041634 268 FLLLSVCLMMVAFIA-TILLMIKSEESWAKIMLYTCTFIPVGVFALSYFPLYIT 320 (363)
Q Consensus 268 ~l~~s~~~m~~aF~~-~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~ 320 (363)
+++..+.+.+.+|.+ .+|.....+ +|....+.....+|..+|++..+--.+.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~-~W~~~~~lt~~~~P~~~~~~~~~~n~i~ 355 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGK-KWKKNSILTSLLFPGILFSIFFILNFIA 355 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCC-ceeehhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666677765 455556554 7887777666668877765544433333
No 138
>PF02932 Neur_chan_memb: Neurotransmitter-gated ion-channel transmembrane region ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature; InterPro: IPR006029 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily: Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits []. Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits []. Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known []. Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) []. Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) []. These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ]. This domain represents four transmembrane helices of a variety of neurotransmitter-gated ion-channels.; GO: 0006811 ion transport, 0016020 membrane; PDB: 1DXZ_A 3MRA_A 1EQ8_C 1OED_C 2PR9_P 1A11_A 1CEK_A 2BG9_E 2KSR_A 2K59_B ....
Probab=30.50 E-value=1.7e+02 Score=24.76 Aligned_cols=53 Identities=19% Similarity=0.178 Sum_probs=24.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 041634 259 PNKMILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFP 316 (363)
Q Consensus 259 ~~~l~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~ 316 (363)
|.|+.+|++.|. | ++.|...+.-.+|+.+.-.++.++..+|+.+.+.+...+-
T Consensus 24 ~~rv~l~it~lL-~----~~~~~~~~~~~lP~~s~~~pl~~~~~~~~~~v~~~~~~~a 76 (237)
T PF02932_consen 24 PERVTLGITTLL-A----MTVFLLMVAENLPPTSYAKPLDGWYFICTMFVFSASLEFA 76 (237)
T ss_dssp HHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHH-H----HHHHHhhhhhhhcccccccchhhhhccccchhhhHHHHhh
Confidence 456766644221 2 3444455555666544334444455554443333333333
No 139
>MTH00213 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=30.26 E-value=1.2e+02 Score=27.71 Aligned_cols=46 Identities=15% Similarity=0.334 Sum_probs=28.4
Q ss_pred HHHHHHHHH--HHHHHHhccCC-chhHHHHHHHHHHHHHHHHHHHHhhh
Q 041634 272 SVCLMMVAF--IATILLMIKSE-ESWAKIMLYTCTFIPVGVFALSYFPL 317 (363)
Q Consensus 272 s~~~m~~aF--~~~~~~v~~~~-~~w~~i~i~~~~~~~~~~~~~~~~~l 317 (363)
|+..++..| ++++|+.+.-. ...+.++||+=+...+.+|+++....
T Consensus 26 SaL~LIlvFi~iAgLyilLgAeFLA~iQILVYVGAIaVLFLFVIMLLn~ 74 (239)
T MTH00213 26 SVFWLILTFIGSSGLFIVLGMEFLGLIFLIVYVGAICIIFLFVIMMIPG 74 (239)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHHHHHHHHHHHhhcc
Confidence 444444444 46778877743 34456777777766666676666666
No 140
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=29.95 E-value=3.5e+02 Score=23.21 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=26.1
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 041634 211 YPILINHLFFVAFTVSDVLSLTFSLAAVVP 240 (363)
Q Consensus 211 ~p~l~~~~~F~~F~i~d~iA~~~S~~a~~~ 240 (363)
+..+.+-++|+-|+.+|.++...|+.++..
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~ 64 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVV 64 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999988654
No 141
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=29.16 E-value=4.4e+02 Score=23.89 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 041634 221 VAFTVSDVLSLTFSLAAVVPFLSM 244 (363)
Q Consensus 221 ~~F~i~d~iA~~~S~~a~~~fl~i 244 (363)
.-+++.|.+..++.++++..+...
T Consensus 131 sr~~~~D~~l~~f~~la~~~~~~~ 154 (245)
T PF02366_consen 131 SRYALLDSILLFFILLAIYCLLRW 154 (245)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 345788999888888887665543
No 142
>KOG4220 consensus Muscarinic acetylcholine receptor [Signal transduction mechanisms]
Probab=28.67 E-value=1.8e+02 Score=29.51 Aligned_cols=107 Identities=15% Similarity=0.312 Sum_probs=61.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHH-----HhccCC--cccccccccccchhhHHH----HHHHHHHHHHHHHHHHHH
Q 041634 215 INHLFFVAFTVSDVLSLTFSLAAVVPF-----LSMLTS--PFRLEDCKHSLPNKMILG----FTFLLLSVCLMMVAFIAT 283 (363)
Q Consensus 215 ~~~~~F~~F~i~d~iA~~~S~~a~~~f-----l~il~s--~~~~~~~~~~l~~~l~~~----~~~l~~s~~~m~~aF~~~ 283 (363)
++...=+.++--|-+|=-.|+..+++. +++ |- +|+.++-.+. .-+|+| +.|++-+=.-..--|+-|
T Consensus 98 LG~~~CdlWLalDYvaSNASVmNLLiISFDRYFsV-TrPLtYrakRTtkr--A~~MI~~AW~iSfiLWaPaIl~WqyivG 174 (503)
T KOG4220|consen 98 LGPLVCDLWLALDYVASNASVMNLLIISFDRYFSV-TRPLTYRAKRTTKR--AGLMIGAAWVLSFVLWAPAILFWQYIVG 174 (503)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhhheeeeecceee-cccccccccccchH--HHHHHHHHHHHHHHHHHHHHHhhHhhee
Confidence 444556677777888766677665442 121 11 1222211100 113333 333333323333456666
Q ss_pred HHHhccCC-------chhHHHHHHHHHH-HHHHHHHHHHhhhHHHHHhh
Q 041634 284 ILLMIKSE-------ESWAKIMLYTCTF-IPVGVFALSYFPLYITKSVT 324 (363)
Q Consensus 284 ~~~v~~~~-------~~w~~i~i~~~~~-~~~~~~~~~~~~l~~~~~~~ 324 (363)
-..|-++. ..|..+-..+.+| +||++..+++...|.+--++
T Consensus 175 krTv~~~eC~iQFlsnp~iTfGTAiAAFYlPVtiM~~LY~rIyret~kR 223 (503)
T KOG4220|consen 175 KRTVPDGECYIQFLSNPAITFGTAIAAFYLPVTIMTILYWRIYRETRKR 223 (503)
T ss_pred eeecCCCceEEEeecCceeehhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 66665543 5688888888888 99999988888888886666
No 143
>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]. This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane
Probab=28.39 E-value=2e+02 Score=26.29 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041634 221 VAFTVSDVLSLTFSLAAVVPFL 242 (363)
Q Consensus 221 ~~F~i~d~iA~~~S~~a~~~fl 242 (363)
.+|.+.-.+|.++|+++.++|.
T Consensus 136 i~~~v~~~ia~l~S~~g~~iF~ 157 (211)
T PF07062_consen 136 IFYTVLVFIAALLSLIGLGIFF 157 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888999999999988875
No 144
>KOG4671 consensus Brain cell membrane protein 1 (BCMP1) [General function prediction only]
Probab=27.78 E-value=1.6e+02 Score=26.30 Aligned_cols=36 Identities=33% Similarity=0.423 Sum_probs=23.7
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 041634 252 EDCKHSLPNKMILGFTFLLLSVCLMMVAFIATILLMI 288 (363)
Q Consensus 252 ~~~~~~l~~~l~~~~~~l~~s~~~m~~aF~~~~~~v~ 288 (363)
|.....+|.|++. +.+++++++-|++|-+..-++.-
T Consensus 9 E~vr~~~plk~i~-licl~~aial~IvAl~s~~Wl~a 44 (201)
T KOG4671|consen 9 ERVRWILPLKLIL-LICLLSAIALDIVALASRGWLQA 44 (201)
T ss_pred eeEEEEEechHHH-HHHHHHHHHHHHHHhccchhhhc
Confidence 4445566666665 77777788877777776655543
No 145
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=27.54 E-value=4e+02 Score=27.64 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Q 041634 266 FTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFPLYITKSVT 324 (363)
Q Consensus 266 ~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~ 324 (363)
+.++-+|+.+.|=++.+.+|++-.-+-.-+-.+....|+.-.+++.+..+.+...++++
T Consensus 329 lSf~~i~mqa~mD~~Lall~lta~~vve~lylpfvtaAF~~fV~~siFemRYLlsI~k~ 387 (636)
T KOG0828|consen 329 LSFLTIAMQAGMDAYLALLFLTANAVVESLYLPFVTAAFFKFVVFSIFEMRYLLSIWKV 387 (636)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678899998999999999887644333444555666666667777788998888883
No 146
>PHA02849 putative transmembrane protein; Provisional
Probab=27.23 E-value=1.7e+02 Score=22.25 Aligned_cols=45 Identities=18% Similarity=0.099 Sum_probs=24.0
Q ss_pred HHHHHHHhhhHHHHHhhccchhhHHhHhhhhhhh-hhccccCCCCcceecCc
Q 041634 308 GVFALSYFPLYITKSVTRGLNYLRDKAKIFLPQW-LVNIFCFSSNSFKVKAT 358 (363)
Q Consensus 308 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 358 (363)
+.|.++|+--|..+... ++++|.-+..| .|+.|+.=.+..|-+++
T Consensus 30 ~~flLlyLvkws~v~d~------~n~iK~kiin~TTRRsF~~Ld~VYYTdD~ 75 (82)
T PHA02849 30 LAFMLLYLIKWSYVINF------LNDMKIKLINLTTRRSFTHLNNVYYTSDN 75 (82)
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHhhhhhhhHHHhcCEEeccCc
Confidence 34444555555544444 44444333444 67777766666665554
No 147
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=26.30 E-value=1.5e+02 Score=24.37 Aligned_cols=47 Identities=19% Similarity=0.343 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHhccCCchhHHHHHHHHHHHHHH
Q 041634 262 MILGFTFLLLSVCLMMVAFI-ATILLMIKSEESWAKIMLYTCTFIPVG 308 (363)
Q Consensus 262 l~~~~~~l~~s~~~m~~aF~-~~~~~v~~~~~~w~~i~i~~~~~~~~~ 308 (363)
..+++.++.+..+.++++.. ..-.+--.....|..+++.++.++|-.
T Consensus 44 I~la~~Lli~G~~li~~g~l~~~~~i~~~~~~~~~llilG~L~fIPG~ 91 (115)
T PF05915_consen 44 IALAVFLLIFGTVLIIIGLLLFFGHIDGDRDRGWALLILGILCFIPGF 91 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHhccH
Confidence 44555555555444433322 111222122235666666666667733
No 148
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=26.28 E-value=53 Score=27.28 Aligned_cols=11 Identities=9% Similarity=0.437 Sum_probs=6.5
Q ss_pred hhHHHHHHHHH
Q 041634 293 SWAKIMLYTCT 303 (363)
Q Consensus 293 ~w~~i~i~~~~ 303 (363)
||+.++|+++.
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 57766555544
No 149
>PF12676 DUF3796: Protein of unknown function (DUF3796); InterPro: IPR024257 This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.
Probab=25.78 E-value=3.3e+02 Score=22.38 Aligned_cols=41 Identities=27% Similarity=0.404 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHH
Q 041634 274 CLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSY 314 (363)
Q Consensus 274 ~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~ 314 (363)
++|+..++..+..++.+...+..+.+.+.-.+++.+|+...
T Consensus 65 v~l~~~~ii~l~~~i~~~~~~~~~~i~i~~~i~l~vf~~~~ 105 (118)
T PF12676_consen 65 VALILLFIILLISMIFDNLELITILIAIAFAIALLVFAISY 105 (118)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455556666666766666555557777775544
No 150
>PRK10483 tryptophan permease; Provisional
Probab=25.44 E-value=2e+02 Score=29.09 Aligned_cols=62 Identities=8% Similarity=0.029 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Q 041634 262 MILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFPLYITKSVT 324 (363)
Q Consensus 262 l~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~~~~~ 324 (363)
++.|+...++.+..+++.-+..-.+.-.+...|.. ..++...+|+.++.+.+-+.-..+.+.
T Consensus 156 l~~~~i~~f~~~~~~l~~~i~~~~L~~~~~~~~~~-~~~~~~alPvl~~SFgfh~iIPsl~~y 217 (414)
T PRK10483 156 VLGAKVITFFLTFGSLLGHVQPATLFNVAESNASY-APYLLMTLPFCLASFGYHGNVPSLMKY 217 (414)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHhccccccchh-HHHHHHHHHHHHhhccCCCcchHHHHH
Confidence 44444444444444333333333332222122222 345667799999999888877775333
No 151
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=25.31 E-value=4.6e+02 Score=23.43 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=15.2
Q ss_pred HHHHHhccCC-chhHHHHHHHHHHHHHHHHHHHHh
Q 041634 282 ATILLMIKSE-ESWAKIMLYTCTFIPVGVFALSYF 315 (363)
Q Consensus 282 ~~~~~v~~~~-~~w~~i~i~~~~~~~~~~~~~~~~ 315 (363)
+++|+.++-. .....+.+|+=|..-+.+|+++-+
T Consensus 43 A~l~~ll~a~Fla~~qIiVYvGAI~VLflFvIMll 77 (198)
T PRK06638 43 AGLYFLLGAEFLGVVQIIVYVGAVMVLFLFVVMML 77 (198)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444444422 223444555555444444544444
No 152
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=22.26 E-value=2.5e+02 Score=26.62 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 041634 267 TFLLLSVCLMMVAFIATILLM 287 (363)
Q Consensus 267 ~~l~~s~~~m~~aF~~~~~~v 287 (363)
.+..+|++.+..+|++|+|=+
T Consensus 260 ~LTvvt~IflP~t~IaGiyGM 280 (318)
T TIGR00383 260 ILTVVSTIFIPLTFIAGIYGM 280 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 355788899999999999985
No 153
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=21.28 E-value=83 Score=26.91 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC
Q 041634 269 LLLSVCLMMVAFIATILLMIKSE 291 (363)
Q Consensus 269 l~~s~~~m~~aF~~~~~~v~~~~ 291 (363)
++.+++.++++.+.|+|.++.+.
T Consensus 121 i~~~i~g~ll~i~~giy~~~r~~ 143 (145)
T PF10661_consen 121 ILLSIGGILLAICGGIYVVLRKV 143 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 46778888899999999998754
No 154
>PF15339 Afaf: Acrosome formation-associated factor
Probab=20.94 E-value=1.4e+02 Score=26.29 Aligned_cols=25 Identities=24% Similarity=0.568 Sum_probs=15.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q 041634 260 NKMILGFTFLLLSVCLMMVAFIATI 284 (363)
Q Consensus 260 ~~l~~~~~~l~~s~~~m~~aF~~~~ 284 (363)
.|||+|+.+|-+=+....+|||.+.
T Consensus 130 lkLmLGIsLmTl~lfv~Ll~~c~at 154 (200)
T PF15339_consen 130 LKLMLGISLMTLFLFVILLAFCSAT 154 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788877666555555555555443
No 155
>COG0581 PstA ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=20.78 E-value=3.1e+02 Score=26.39 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCc----hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHh
Q 041634 270 LLSVCLMMVAFIATILLMIKSEE----SWAKIMLYTCTFIPVGVFALSYFPLYITKSV 323 (363)
Q Consensus 270 ~~s~~~m~~aF~~~~~~v~~~~~----~w~~i~i~~~~~~~~~~~~~~~~~l~~~~~~ 323 (363)
...+.++.++..+|+|+.=..+. ++....+-.++.+|-.++.+.-+-+++..+.
T Consensus 82 ~~~li~~PiGv~aaIYL~EYa~~~~~t~~ir~~i~~La~vPSIV~GLFg~~~fV~~~g 139 (292)
T COG0581 82 LAILIGVPLGIGAGIYLAEYAKKSRLTKVIRFAIDILASVPSIVYGLFGLGFFVVTLG 139 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHC
Confidence 34667888899999999866533 3445666788888888877766666666655
No 156
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=20.47 E-value=5.2e+02 Score=23.28 Aligned_cols=10 Identities=30% Similarity=0.265 Sum_probs=5.8
Q ss_pred cccccccccc
Q 041634 250 RLEDCKHSLP 259 (363)
Q Consensus 250 ~~~~~~~~l~ 259 (363)
+..|+..+++
T Consensus 29 RfPD~YtRLH 38 (197)
T PRK12585 29 RLPDVYTRTH 38 (197)
T ss_pred hcCcHHHHhh
Confidence 5557665554
Done!