Query 041634
Match_columns 363
No_of_seqs 335 out of 2222
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 15:35:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.8 7E-21 2.4E-25 166.1 12.8 135 14-175 3-151 (169)
2 3twr_A Tankyrase-2; ankyrin re 99.8 7E-20 2.4E-24 156.8 9.3 138 13-176 6-156 (165)
3 3v31_A Ankyrin repeat family A 99.8 4.4E-19 1.5E-23 152.1 13.5 141 15-182 3-157 (167)
4 4gpm_A Engineered protein OR26 99.8 2.2E-19 7.6E-24 156.5 10.0 113 5-125 27-152 (169)
5 2rfm_A Putative ankyrin repeat 99.8 6.2E-19 2.1E-23 154.7 12.4 140 11-177 31-184 (192)
6 3v30_A DNA-binding protein rfx 99.8 1.1E-18 3.7E-23 150.3 13.6 136 17-178 4-153 (172)
7 4b93_B Ankyrin repeat domain-c 99.8 2.2E-19 7.6E-24 167.6 9.4 141 4-171 75-228 (269)
8 1awc_B Protein (GA binding pro 99.8 1.1E-18 3.9E-23 147.7 12.4 129 15-171 2-143 (153)
9 1bd8_A P19INK4D CDK4/6 inhibit 99.8 8.9E-19 3E-23 148.3 10.6 134 15-176 2-149 (156)
10 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.1E-18 7E-23 148.7 12.8 134 11-171 10-156 (169)
11 3f6q_A Integrin-linked protein 99.8 6.8E-19 2.3E-23 153.0 9.7 131 15-171 5-148 (179)
12 1yyh_A HN1;, notch 1, ankyrin 99.8 1.3E-18 4.3E-23 159.7 12.0 158 12-176 54-239 (253)
13 2rfa_A Transient receptor pote 99.8 3.4E-18 1.1E-22 153.9 12.7 157 5-176 27-213 (232)
14 3b7b_A Euchromatic histone-lys 99.8 4.2E-18 1.4E-22 153.6 12.9 161 5-172 34-221 (237)
15 2f8y_A Notch homolog 1, transl 99.8 6.6E-18 2.3E-22 150.9 14.0 153 12-171 22-201 (223)
16 3aji_A 26S proteasome non-ATPa 99.8 3.2E-18 1.1E-22 153.8 11.9 155 10-172 35-216 (231)
17 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.8E-18 1.3E-22 145.1 11.5 131 14-171 4-147 (162)
18 1oy3_D Transcription factor in 99.8 1.7E-18 5.7E-23 159.6 9.8 110 12-125 42-208 (282)
19 3hra_A Ankyrin repeat family p 99.8 4.6E-18 1.6E-22 149.5 12.2 23 153-175 170-193 (201)
20 2dzn_A Probable 26S proteasome 99.8 2.4E-18 8.1E-23 154.1 10.4 154 11-170 32-217 (228)
21 2rfa_A Transient receptor pote 99.7 7.3E-18 2.5E-22 151.7 13.0 147 15-183 3-177 (232)
22 1s70_B 130 kDa myosin-binding 99.7 2.1E-18 7E-23 161.0 8.5 75 16-98 41-115 (299)
23 1sw6_A Regulatory protein SWI6 99.7 2E-18 6.9E-23 165.1 8.2 140 4-169 119-324 (327)
24 2f8y_A Notch homolog 1, transl 99.7 1.4E-17 4.7E-22 148.8 13.1 135 32-171 6-168 (223)
25 1yyh_A HN1;, notch 1, ankyrin 99.7 1E-17 3.4E-22 153.7 12.2 143 22-171 30-200 (253)
26 3v30_A DNA-binding protein rfx 99.7 9.4E-18 3.2E-22 144.4 11.2 109 9-125 30-151 (172)
27 2xai_A ASB-9, ankyrin repeat a 99.7 6.3E-18 2.2E-22 155.9 10.7 109 7-124 28-149 (261)
28 1oy3_D Transcription factor in 99.7 9E-18 3.1E-22 154.7 11.5 154 11-170 5-234 (282)
29 3utm_A Tankyrase-1; tankyrase, 99.7 1.8E-17 6E-22 157.1 13.5 87 4-98 47-133 (351)
30 3t8k_A Uncharacterized protein 99.7 8.6E-18 2.9E-22 148.6 10.4 146 15-185 6-179 (186)
31 3hra_A Ankyrin repeat family p 99.7 2.1E-17 7E-22 145.3 11.9 132 15-171 5-150 (201)
32 2dzn_A Probable 26S proteasome 99.7 2.3E-17 7.9E-22 147.6 11.9 151 15-171 2-184 (228)
33 1bi7_B P16INK4A, MTS1, multipl 99.7 3E-18 1E-22 145.8 5.4 128 11-166 8-149 (156)
34 3aji_A 26S proteasome non-ATPa 99.7 2.8E-17 9.7E-22 147.5 12.1 150 15-171 6-182 (231)
35 1k1a_A B-cell lymphoma 3-encod 99.7 1.2E-17 4.1E-22 150.5 9.5 114 4-125 35-166 (241)
36 2jab_A H10-2-G3; HER2, darpin, 99.7 1.1E-17 3.8E-22 139.1 8.5 108 10-125 9-129 (136)
37 1ikn_D Protein (I-kappa-B-alph 99.7 9.5E-18 3.2E-22 151.7 8.2 140 8-170 38-193 (236)
38 1n11_A Ankyrin; clathrin, BAND 99.7 4.6E-17 1.6E-21 160.4 13.4 154 10-171 207-387 (437)
39 1d9s_A Cyclin-dependent kinase 99.7 8.4E-18 2.9E-22 139.8 6.7 111 6-125 3-127 (136)
40 4hbd_A KN motif and ankyrin re 99.7 1.8E-17 6.1E-22 154.8 9.8 142 10-176 106-266 (276)
41 3d9h_A CDNA FLJ77766, highly s 99.7 2.4E-17 8.1E-22 154.4 10.5 151 10-170 54-231 (285)
42 3b7b_A Euchromatic histone-lys 99.7 6E-17 2.1E-21 145.9 12.4 154 10-171 6-187 (237)
43 1s70_B 130 kDa myosin-binding 99.7 7.4E-17 2.5E-21 150.4 12.8 139 5-170 63-241 (299)
44 3c5r_A BARD-1, BRCA1-associate 99.7 1.3E-17 4.4E-22 138.5 6.8 110 5-123 1-123 (137)
45 2etb_A Transient receptor pote 99.7 8.1E-17 2.8E-21 147.3 12.7 154 11-176 39-237 (256)
46 4b93_B Ankyrin repeat domain-c 99.7 2.4E-17 8.3E-22 153.7 9.2 132 14-171 51-195 (269)
47 3jxi_A Vanilloid receptor-rela 99.7 6.5E-17 2.2E-21 148.1 11.7 154 13-175 44-240 (260)
48 1k1a_A B-cell lymphoma 3-encod 99.7 1.2E-16 4.3E-21 143.8 12.8 156 10-171 4-193 (241)
49 3aaa_C Myotrophin, protein V-1 99.7 3.3E-17 1.1E-21 133.7 8.0 99 14-120 6-117 (123)
50 3utm_A Tankyrase-1; tankyrase, 99.7 3.5E-17 1.2E-21 155.1 8.6 140 4-169 13-165 (351)
51 3deo_A Signal recognition part 99.7 1.3E-16 4.5E-21 139.4 11.5 102 12-122 41-156 (183)
52 1awc_B Protein (GA binding pro 99.7 6E-17 2E-21 137.0 9.0 107 11-125 30-149 (153)
53 1n11_A Ankyrin; clathrin, BAND 99.7 1.1E-16 3.8E-21 157.7 12.1 160 3-170 2-188 (437)
54 3ljn_A Hypothetical protein; a 99.7 7.9E-17 2.7E-21 155.1 10.3 140 2-170 7-182 (364)
55 3eu9_A Huntingtin-interacting 99.7 4.3E-16 1.5E-20 139.5 14.3 166 5-177 32-227 (240)
56 2xai_A ASB-9, ankyrin repeat a 99.7 1.4E-16 4.9E-21 146.8 11.1 129 14-170 2-143 (261)
57 2y1l_E Darpin-8.4; hydrolase-i 99.7 1.3E-16 4.4E-21 137.3 9.9 113 5-125 37-162 (169)
58 3ljn_A Hypothetical protein; a 99.7 1.5E-16 5.2E-21 153.2 11.1 106 47-176 134-260 (364)
59 3kea_A K1L; tropism, ANK repea 99.7 1E-16 3.6E-21 150.1 9.6 151 10-170 26-204 (285)
60 1bd8_A P19INK4D CDK4/6 inhibit 99.7 9.8E-17 3.4E-21 135.6 8.4 110 7-125 28-149 (156)
61 3twr_A Tankyrase-2; ankyrin re 99.7 1.1E-16 3.8E-21 136.7 8.4 112 4-124 31-155 (165)
62 1ikn_D Protein (I-kappa-B-alph 99.7 1.9E-16 6.6E-21 143.1 10.3 142 4-168 67-226 (236)
63 3v31_A Ankyrin repeat family A 99.7 1.9E-16 6.4E-21 135.5 9.7 111 7-125 28-151 (167)
64 2etb_A Transient receptor pote 99.7 5.4E-17 1.9E-21 148.5 6.5 137 15-170 2-181 (256)
65 2rfm_A Putative ankyrin repeat 99.7 1.6E-16 5.4E-21 139.3 8.9 110 8-125 61-183 (192)
66 3d9h_A CDNA FLJ77766, highly s 99.7 3.6E-16 1.2E-20 146.3 11.9 124 43-171 51-200 (285)
67 2pnn_A Transient receptor pote 99.7 6.3E-16 2.1E-20 142.9 13.3 153 12-175 51-248 (273)
68 2fo1_E LIN-12 protein; beta-ba 99.7 3.2E-16 1.1E-20 152.4 11.8 165 4-176 155-362 (373)
69 2pnn_A Transient receptor pote 99.7 3.4E-17 1.2E-21 151.5 4.5 151 3-171 1-194 (273)
70 1wdy_A 2-5A-dependent ribonucl 99.7 2.2E-15 7.7E-20 138.1 16.5 106 12-125 36-164 (285)
71 1n0r_A 4ANK, 4 ankyrin repeats 99.6 2.7E-16 9.3E-21 127.1 8.7 103 15-125 2-117 (126)
72 3ui2_A Signal recognition part 99.6 4.1E-16 1.4E-20 142.9 10.7 99 13-120 43-155 (244)
73 2vge_A RELA-associated inhibit 99.6 1.5E-16 5.3E-21 144.7 7.6 106 12-125 18-139 (229)
74 3f6q_A Integrin-linked protein 99.6 1.3E-16 4.6E-21 138.4 6.6 111 5-123 29-152 (179)
75 1ihb_A P18-INK4C(INK6), cyclin 99.6 2.9E-16 1E-20 133.3 8.2 113 4-125 27-153 (162)
76 1wdy_A 2-5A-dependent ribonucl 99.6 1.2E-15 4.1E-20 139.9 12.9 104 14-125 4-121 (285)
77 3jxi_A Vanilloid receptor-rela 99.6 5.4E-16 1.9E-20 142.0 10.0 105 13-125 91-241 (260)
78 3c5r_A BARD-1, BRCA1-associate 99.6 2.1E-16 7.3E-21 131.1 6.2 101 46-170 5-118 (137)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.6 1.8E-16 6.1E-21 144.5 5.8 127 14-168 4-144 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.6 7.5E-16 2.6E-20 140.3 9.9 104 14-125 36-155 (239)
81 3t8k_A Uncharacterized protein 99.6 1.4E-16 4.7E-21 140.8 4.7 106 13-125 36-170 (186)
82 3eu9_A Huntingtin-interacting 99.6 1.9E-15 6.5E-20 135.3 11.6 131 14-170 8-151 (240)
83 1d9s_A Cyclin-dependent kinase 99.6 4.5E-16 1.5E-20 129.2 6.7 107 41-171 2-121 (136)
84 2fo1_E LIN-12 protein; beta-ba 99.6 1.1E-15 3.9E-20 148.4 10.4 127 40-171 155-323 (373)
85 4hbd_A KN motif and ankyrin re 99.6 3.1E-16 1.1E-20 146.4 5.8 131 17-171 78-226 (276)
86 3ehr_A Osteoclast-stimulating 99.6 5E-16 1.7E-20 139.4 7.0 105 13-125 71-189 (222)
87 2vge_A RELA-associated inhibit 99.6 1.8E-16 6.2E-21 144.2 4.1 114 5-125 44-204 (229)
88 3aaa_C Myotrophin, protein V-1 99.6 6.6E-16 2.3E-20 125.8 6.8 98 48-169 4-114 (123)
89 4g8k_A 2-5A-dependent ribonucl 99.6 3.8E-15 1.3E-19 141.8 12.5 142 6-171 116-283 (337)
90 1sw6_A Regulatory protein SWI6 99.6 3E-15 1E-19 143.0 10.8 99 19-125 101-221 (327)
91 4g8k_A 2-5A-dependent ribonucl 99.6 5.4E-15 1.8E-19 140.8 12.2 104 14-125 24-141 (337)
92 2b0o_E UPLC1; arfgap, structur 99.6 2.9E-15 1E-19 142.1 9.7 102 16-125 152-275 (301)
93 2jab_A H10-2-G3; HER2, darpin, 99.6 2.9E-15 9.8E-20 124.3 8.0 101 47-171 10-123 (136)
94 1dcq_A PYK2-associated protein 99.6 4E-15 1.4E-19 139.5 9.6 104 16-125 131-254 (278)
95 3jue_A Arfgap with coiled-coil 99.6 5.1E-15 1.7E-19 144.6 10.0 133 15-170 199-346 (368)
96 1n0r_A 4ANK, 4 ankyrin repeats 99.6 1.2E-14 4E-19 117.4 10.2 98 50-171 1-111 (126)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.5 4E-15 1.4E-19 115.4 5.4 81 15-123 2-82 (93)
98 3kea_A K1L; tropism, ANK repea 99.5 7.9E-15 2.7E-19 137.3 7.9 76 15-98 62-138 (285)
99 3lvq_E ARF-GAP with SH3 domain 99.5 1.1E-14 3.9E-19 147.1 9.5 101 17-125 134-256 (497)
100 3ehr_A Osteoclast-stimulating 99.5 5E-15 1.7E-19 132.8 6.1 101 46-170 68-182 (222)
101 2b0o_E UPLC1; arfgap, structur 99.5 8.8E-15 3E-19 138.8 7.0 104 12-122 187-299 (301)
102 1bi7_B P16INK4A, MTS1, multipl 99.5 1E-14 3.5E-19 123.8 5.8 103 45-171 6-121 (156)
103 2l6b_A NR1C; ankyrin, consensu 99.5 7.3E-15 2.5E-19 118.0 4.4 72 48-124 6-90 (115)
104 3ui2_A Signal recognition part 99.5 2.7E-14 9.2E-19 130.8 8.7 109 5-125 67-176 (244)
105 3deo_A Signal recognition part 99.5 5.4E-14 1.9E-18 122.6 8.0 109 5-125 66-175 (183)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.5 2.1E-13 7.2E-18 105.5 8.7 69 5-76 25-93 (93)
107 2l6b_A NR1C; ankyrin, consensu 99.4 1.2E-13 4.2E-18 110.8 6.7 93 12-112 6-111 (115)
108 2zgd_A 3 repeat synthetic anky 99.4 8.4E-14 2.9E-18 111.6 4.4 64 10-76 19-82 (110)
109 2zgd_A 3 repeat synthetic anky 99.4 1.5E-12 5E-17 104.3 9.0 78 42-124 15-105 (110)
110 2aja_A Ankyrin repeat family p 99.3 2.5E-13 8.6E-18 132.9 -0.1 108 14-125 91-215 (376)
111 3lvq_E ARF-GAP with SH3 domain 99.3 6.5E-12 2.2E-16 126.8 9.1 100 12-119 168-277 (497)
112 3jue_A Arfgap with coiled-coil 99.2 2.9E-11 1E-15 117.9 9.4 99 13-119 233-347 (368)
113 1dcq_A PYK2-associated protein 99.2 3.3E-11 1.1E-15 112.7 8.8 99 12-119 166-273 (278)
114 2aja_A Ankyrin repeat family p 99.2 2.2E-12 7.4E-17 126.3 -1.1 103 14-125 127-241 (376)
115 3rhw_A Avermectin-sensitive gl 37.5 1.5E+02 0.0051 27.3 9.4 60 259-323 243-302 (347)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.85 E-value=7e-21 Score=166.09 Aligned_cols=135 Identities=22% Similarity=0.205 Sum_probs=111.0
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
+++++|+.|+.. |+.+.|..|+.. +.+++.+|.+|.||||.|+..|+.++++.|++.+++ +. .+|.+|+|||
T Consensus 3 dlg~~L~~Aa~~-G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~----~~d~~g~TpL 74 (169)
T 4gpm_A 3 ELGKRLIEAAEN-GNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VN----AKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hh----hhccCCCCHH
Confidence 456789999998 998877776654 678899999999999999999999999999999998 54 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..+|.+|.+|+||||+|++.|+.+++ +++....+ ..+.+|++
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v------------~~Ll~~ga-------d~~~~d~~ 135 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV------------KLLISKGA-------DVNTSDSD 135 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTTC-------CTTCCCTT
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-------CccccCCC
Confidence 99998 567899999999999999999976554 12211122 25788999
Q ss_pred CCCHHHHHHHh-cHHH
Q 041634 161 GFTPEELFATA-NNEL 175 (363)
Q Consensus 161 G~Tp~dl~~~~-~~~l 175 (363)
|+||++++.+. +.++
T Consensus 136 G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 136 GRTPLDLAREHGNEEV 151 (169)
T ss_dssp SCCHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHcCCHHH
Confidence 99999998764 4443
No 2
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=7e-20 Score=156.77 Aligned_cols=138 Identities=22% Similarity=0.178 Sum_probs=111.5
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
.+.+++||.|+.. |+.+.+..++.. .+.+.+..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+||
T Consensus 6 ~~~~~~l~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~ 78 (165)
T 3twr_A 6 SEADRQLLEAAKA-GDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VH----AKDKGGLVP 78 (165)
T ss_dssp CHHHHHHHHHHHH-TCHHHHHHHCCT-TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCH
T ss_pred chhhHHHHHHHHh-CCHHHHHHHHHc-CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CC----ccCCCCCCH
Confidence 3456899999998 998877777665 5667778889999999999999999999999999988 44 689999999
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCC
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNN 159 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~ 159 (363)
||+|+. +..++.+|.+|+||||+|+..++.+++ +++.... ...+.+|+
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g-------a~~~~~~~ 139 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC------------KLLLQHG-------ADPTKKNR 139 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH------------HHHHHTT-------CCTTCCCT
T ss_pred HHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHH------------HHHHHcC-------CCCcccCC
Confidence 999998 456789999999999999999876543 1111111 12578899
Q ss_pred CCCCHHHHHHHhcHHHH
Q 041634 160 MGFTPEELFATANNELR 176 (363)
Q Consensus 160 ~G~Tp~dl~~~~~~~l~ 176 (363)
+|+||.+++.+.+.++.
T Consensus 140 ~g~t~l~~a~~~~~~i~ 156 (165)
T 3twr_A 140 DGNTPLDLVKDGDTDIQ 156 (165)
T ss_dssp TSCCTGGGSCTTCHHHH
T ss_pred CCCChhHhHhcCChHHH
Confidence 99999999877666544
No 3
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.80 E-value=4.4e-19 Score=152.09 Aligned_cols=141 Identities=13% Similarity=0.028 Sum_probs=112.2
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
.+++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+||||
T Consensus 3 ~~t~L~~A~~~-g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~ 74 (167)
T 3v31_A 3 NSLSVHQLAAQ-GEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQ----LLGKGRESALS 74 (167)
T ss_dssp TCCCHHHHHHT-TCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCCHHH
T ss_pred CcchHHHHHHC-CCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CC----CcCCCCCcHHH
Confidence 46789999998 998877777766 466888999999999999999999999999999888 44 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCC
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMG 161 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G 161 (363)
+|+. +..++.+|.+|+||||+|+..++.+++ +++.... ...+.+|.+|
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g-------~~~~~~~~~g 135 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV------------KMLLESG-------ADPTIETDSG 135 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTT-------CCTTCCCTTS
T ss_pred HHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHH------------HHHHHcC-------CCCCCcCCCC
Confidence 9998 456788999999999999999876543 1111111 1256789999
Q ss_pred CCHHHHHHH-hcHHHHHhhHHH
Q 041634 162 FTPEELFAT-ANNELRAQSKEW 182 (363)
Q Consensus 162 ~Tp~dl~~~-~~~~l~~~~~~~ 182 (363)
+||.+++.. .+.++.+...++
T Consensus 136 ~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 136 YNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHH
Confidence 999999875 455555444443
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.79 E-value=2.2e-19 Score=156.51 Aligned_cols=113 Identities=19% Similarity=0.116 Sum_probs=98.3
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.....++++||+|+.. ++.+.+..++.. +.+++.+|.+|+||||+|++.|+.++|+.|++++++ +. .
T Consensus 27 Gadvn~~d~~g~t~l~~a~~~-~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn----~ 98 (169)
T 4gpm_A 27 GADVNASDSDGRTPLHHAAEN-GHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VN----A 98 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----C
T ss_pred CCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CC----C
Confidence 566667777889999999998 887766555543 678899999999999999999999999999999998 54 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|.+|+||||+|+. +..++.+|.+|+||||+|++.|+.+++
T Consensus 99 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv 152 (169)
T 4gpm_A 99 KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVV 152 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 89999999999998 567889999999999999999987655
No 5
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=6.2e-19 Score=154.73 Aligned_cols=140 Identities=18% Similarity=0.084 Sum_probs=111.6
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
.....+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||+|+..|+.+++++|++.+++ .. .+|..|+
T Consensus 31 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~ 102 (192)
T 2rfm_A 31 RDSYNRTPLMVACML-GMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VN----TKDFSGK 102 (192)
T ss_dssp CCTTCCCHHHHHHHH-TCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TT----CCCTTSC
T ss_pred cCCCCCCHHHHHHHc-CCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CC----CCCCCCC
Confidence 345577999999998 998877776665 556788899999999999999999999999999988 44 6899999
Q ss_pred cHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccC
Q 041634 91 TIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHG 157 (363)
Q Consensus 91 t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~ 157 (363)
||||+|+. +..++.+|.+|+||||+|+..++.+++ +++....+ ..+.+
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~ 163 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIV------------KKLLELGA-------DISAR 163 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHH------------HHHHHTTC-------CTTCB
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHCCC-------CCCCc
Confidence 99999997 456788999999999999999876543 11111111 25688
Q ss_pred CCCCCCHHHHHHH-hcHHHHH
Q 041634 158 NNMGFTPEELFAT-ANNELRA 177 (363)
Q Consensus 158 N~~G~Tp~dl~~~-~~~~l~~ 177 (363)
|.+|+||.+++.. .+.++.+
T Consensus 164 ~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 164 DLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp CTTSCBHHHHHHHTTCHHHHH
T ss_pred CCCCCCHHHHHHHhCcHHHHH
Confidence 9999999999875 3444443
No 6
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=1.1e-18 Score=150.34 Aligned_cols=136 Identities=19% Similarity=0.088 Sum_probs=109.1
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
++||.|+.. |+.+.+..++.. ....++..|.+|.||||.|+..|+.++|++|++.+++ .. .+|..|+||||+|
T Consensus 4 ~~L~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A 76 (172)
T 3v30_A 4 LSIHQLAAQ-GELDQLKEHLRK-GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PH----ILAKERESALSLA 76 (172)
T ss_dssp CCHHHHHHT-TCHHHHHHHHTT-CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TT----CCCTTCCCHHHHH
T ss_pred hhHHHHHHc-CCHHHHHHHHHc-CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ch----hhcccCCCHHHHH
Confidence 579999998 999987777766 4555788899999999999999999999999999988 44 6899999999999
Q ss_pred Hh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCC
Q 041634 97 AT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFT 163 (363)
Q Consensus 97 a~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~T 163 (363)
+. +..++.+|.+|+||||+|+..++.+++ +++.... ...+.+|++|+|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g-------a~~~~~~~~g~t 137 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCV------------EALLARG-------ADLTTEADSGYT 137 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTT-------CCTTCCCTTSCC
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcC-------CCccccCCCCCC
Confidence 98 456788999999999999999876543 1111111 125678999999
Q ss_pred HHHHHHH-hcHHHHHh
Q 041634 164 PEELFAT-ANNELRAQ 178 (363)
Q Consensus 164 p~dl~~~-~~~~l~~~ 178 (363)
|++++.. .+.++.+.
T Consensus 138 ~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 138 PMDLAVALGYRKVQQV 153 (172)
T ss_dssp HHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhCcHHHHHH
Confidence 9999876 34554443
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=2.2e-19 Score=167.62 Aligned_cols=141 Identities=19% Similarity=0.090 Sum_probs=98.7
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.|.+.+.....++++||+|+.. |+.+.+..+ ++ .+.+.+..+.+|.||+|.|+..|+.++++.|++.+++ ..
T Consensus 75 ~Gadvn~~d~~G~TpLh~A~~~-g~~~~v~~L-l~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n---- 146 (269)
T 4b93_B 75 SGLGVNVTSQDGSSPLHVAALH-GRADLIPLL-LK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PN---- 146 (269)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHT-TCTTHHHHH-HH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SC----
T ss_pred CCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHH-Hh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC-CC----
Confidence 3455555556677788888876 776644444 43 2556677777888888888888888888888888777 44
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcc
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTM 150 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~ 150 (363)
.+|..|+||||+|+. +..+|.+|.+|+||||+|+..|+.+++ +++....+
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v------------~~Ll~~Ga----- 209 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVV------------ELLLLHGA----- 209 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH------------HHHHHTTC-----
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHH------------HHHHHCCC-----
Confidence 578888888888886 456677888888888888888765443 12211111
Q ss_pred ccccccCCCCCCCHHHHHHHh
Q 041634 151 AHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 151 ~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
..+.+|++|+||++++.+.
T Consensus 210 --d~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 210 --SVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp --CSCCCCTTSCCSGGGSCTT
T ss_pred --CCCCcCCCCCCHHHHHHhC
Confidence 3678999999999998653
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=1.1e-18 Score=147.70 Aligned_cols=129 Identities=17% Similarity=0.024 Sum_probs=103.9
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
++++||.|+.. |+.+.+..++.... +.. .|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+||||
T Consensus 2 ~~~~L~~A~~~-g~~~~v~~Ll~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~ 72 (153)
T 1awc_B 2 LGKKLLEAARA-GQDDEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RD----ARTKVDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHH-TCHHHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TT----CCCTTCCCHHH
T ss_pred ccHHHHHHHHc-CCHHHHHHHHHcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CCCCCCCCHHH
Confidence 56899999998 99998877777633 333 588899999999999999999999999988 44 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCC
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMG 161 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G 161 (363)
+|+. +..++.+|.+|+||||+|+..++.+++ +++....+ ..+.+|++|
T Consensus 73 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~g 133 (153)
T 1awc_B 73 MAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV------------ELLIKYGA-------DVHTQSKFC 133 (153)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTTC-------CTTCCCTTS
T ss_pred HHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-------CccccCCCC
Confidence 9997 456788999999999999999876543 11111111 256789999
Q ss_pred CCHHHHHHHh
Q 041634 162 FTPEELFATA 171 (363)
Q Consensus 162 ~Tp~dl~~~~ 171 (363)
+||.+++...
T Consensus 134 ~t~l~~A~~~ 143 (153)
T 1awc_B 134 KTAFDISIDN 143 (153)
T ss_dssp CCHHHHHHHT
T ss_pred CCHHHHHHHc
Confidence 9999998763
No 9
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.77 E-value=8.9e-19 Score=148.27 Aligned_cols=134 Identities=20% Similarity=0.160 Sum_probs=109.1
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
..++||.|+.. |+.+.+..++.. .+.+.+..|.+|.||||. +..|+.++++.|++.+++ .. .+|..|+||||
T Consensus 2 ~~~~L~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~ 73 (156)
T 1bd8_A 2 AGDRLSGAAAR-GDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PN----VQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHH-TCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TT----CCCTTSCCHHH
T ss_pred cchHHHHHHHh-CCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CC----CcCCCCCCHHH
Confidence 35799999998 999988888777 666888899999999999 999999999999999988 44 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCC
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMG 161 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G 161 (363)
+|+. +..++.+|.+|+||||+|++.|+.+++ +++. +. ...+.+|.+|
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll----~~----~~~~~~~~~g 133 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV------------SFLA----AE----SDLHRRDARG 133 (156)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHH------------HHHH----TT----SCTTCCCTTS
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHH------------HHHH----hc----cCCCCcCCCC
Confidence 9998 456788999999999999999976543 1111 11 2256889999
Q ss_pred CCHHHHHHHh-cHHHH
Q 041634 162 FTPEELFATA-NNELR 176 (363)
Q Consensus 162 ~Tp~dl~~~~-~~~l~ 176 (363)
+||.+++.+. +.++.
T Consensus 134 ~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 134 LTPLELALQRGAQDLV 149 (156)
T ss_dssp CCHHHHHHHSCCHHHH
T ss_pred CCHHHHHHHcCcHHHH
Confidence 9999998763 44433
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.77 E-value=2.1e-18 Score=148.67 Aligned_cols=134 Identities=20% Similarity=0.126 Sum_probs=106.4
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
......++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+
T Consensus 10 ~~~~~~~~l~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~ 81 (169)
T 2y1l_E 10 HGSDLGKKLLEAARA-GRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VN----AVDHAGM 81 (169)
T ss_dssp ---CHHHHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSC
T ss_pred CCCcccchHHHHHHc-CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----ccCCCCC
Confidence 334456899999998 998866666654 567888999999999999999999999999999988 44 6899999
Q ss_pred cHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccC
Q 041634 91 TIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHG 157 (363)
Q Consensus 91 t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~ 157 (363)
||||+|+. +..++.+|.+|+||||+|++.++.+++ +++....+ ..+.+
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g~-------~~~~~ 142 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIV------------EVLLKNGA-------DVNAQ 142 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTTC-------CTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-------CCCCc
Confidence 99999998 456788999999999999999875543 11111111 25678
Q ss_pred CCCCCCHHHHHHHh
Q 041634 158 NNMGFTPEELFATA 171 (363)
Q Consensus 158 N~~G~Tp~dl~~~~ 171 (363)
|.+|+||.+++.+.
T Consensus 143 ~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 143 DKFGKTAFDISIDN 156 (169)
T ss_dssp CTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHh
Confidence 99999999998763
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=6.8e-19 Score=152.96 Aligned_cols=131 Identities=18% Similarity=0.106 Sum_probs=106.1
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
..++||.|+.. |+.+.+..++.. .+.+++..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+||||
T Consensus 5 ~~~~l~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~ 77 (179)
T 3f6q_A 5 FMDDIFTQCRE-GNAVAVRLWLDN-TENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-IN----VMNRGDDTPLH 77 (179)
T ss_dssp --CCHHHHHHH-TCHHHHHHHHHC-TTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCCHHH
T ss_pred HHHHHHHHHHc-CCHHHHHHHHhc-CcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CC----CcCCCCCCHHH
Confidence 45689999998 998877766655 5667889999999999999999999999999999988 54 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCC
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMG 161 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G 161 (363)
+|+. +..++.+|.+|+||||+|+..++.+++ +++....+ ..+.+|++|
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~g 138 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA------------EDLVANGA-------LVSICNKYG 138 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHTTC-------CSSBCCTTS
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH------------HHHHHCCC-------CcchhccCC
Confidence 9998 566789999999999999999876543 11111111 257889999
Q ss_pred CCHHHHHHHh
Q 041634 162 FTPEELFATA 171 (363)
Q Consensus 162 ~Tp~dl~~~~ 171 (363)
+||.+++.+.
T Consensus 139 ~tpl~~A~~~ 148 (179)
T 3f6q_A 139 EMPVDKAKAP 148 (179)
T ss_dssp CCGGGGSCHH
T ss_pred CCcHHHHHHH
Confidence 9999997553
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.77 E-value=1.3e-18 Score=159.72 Aligned_cols=158 Identities=16% Similarity=0.089 Sum_probs=115.2
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCc
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t 91 (363)
...+.++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.+++++|++.++. ... .+|..|+|
T Consensus 54 d~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~---~~~~~g~t 126 (253)
T 1yyh_A 54 DRTGETALHLAARY-SRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DLD---ARMHDGTT 126 (253)
T ss_dssp CTTSCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS-CTT---CCCTTCCC
T ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-Ccc---ccCCCCCc
Confidence 45678999999998 887755555543 667888899999999999999999999999999884 233 78999999
Q ss_pred HHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccc-------------cCCchhhhHHHHHHHHHh
Q 041634 92 IQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEK-------------MEGPALLLRDELLWYERV 145 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~-------------~~~~al~l~~~l~~~~~V 145 (363)
|||+|+. +..++.+|.+|+||||+|+..++.++++. -+.+++.+...-...+.+
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v 206 (253)
T 1yyh_A 127 PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 206 (253)
T ss_dssp HHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHH
Confidence 9999997 45678899999999999999887765531 133455544322223333
Q ss_pred hhhccc-cccccCCCCCCCHHHHHHH-hcHHHH
Q 041634 146 KSVTMA-HFLNHGNNMGFTPEELFAT-ANNELR 176 (363)
Q Consensus 146 ~~~~~~-~~~~~~N~~G~Tp~dl~~~-~~~~l~ 176 (363)
+..+.. ...+.+|..|+||.+++.+ .|.++.
T Consensus 207 ~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 207 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 322221 1356788899999998865 444444
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.76 E-value=3.4e-18 Score=153.92 Aligned_cols=157 Identities=20% Similarity=0.119 Sum_probs=90.2
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCC---cccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDH---ALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~---~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~ 81 (363)
|.+.+.....++++||+|+.. |+.+.+..++....+. ..+..|.+|.||||.|+..|+.++++.|++.+++ ..
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-- 102 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALY-DNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS-VS-- 102 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TT--
T ss_pred CCCcccCCCCCCCHHHHHHHc-CCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CC--
Confidence 445555555666777777776 6666554444432111 1134566777777777777777777777777766 33
Q ss_pred hhccC-------------CCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhh
Q 041634 82 MTRQN-------------KAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLL 135 (363)
Q Consensus 82 ~~~~d-------------~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l 135 (363)
.+| ..|+||||+|+. +..++.+|.+|+||||+|+..++.+++. ++
T Consensus 103 --~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~-------~i 173 (232)
T 2rfa_A 103 --ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFAC-------QM 173 (232)
T ss_dssp --CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHH-------HH
T ss_pred --cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHH-------HH
Confidence 233 267777777776 4456677777777777777776543220 00
Q ss_pred HHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH-hcHHHH
Q 041634 136 RDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT-ANNELR 176 (363)
Q Consensus 136 ~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~-~~~~l~ 176 (363)
- +++...... .......+.+|++|+||++++.+ .+.++.
T Consensus 174 ~-~~Ll~~g~~-~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v 213 (232)
T 2rfa_A 174 Y-NLLLSYDGG-DHLKSLELVPNNQGLTPFKLAGVEGNIVMF 213 (232)
T ss_dssp H-HHHHHTTCS-CSSCCGGGCCCTTSCCHHHHHHHHTCHHHH
T ss_pred H-HHHHhcCCc-hhhhhhhccCCCCCCCHHHHHHHcCCHHHH
Confidence 0 000000000 00001125789999999999875 344443
No 14
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.76 E-value=4.2e-18 Score=153.57 Aligned_cols=161 Identities=17% Similarity=0.053 Sum_probs=103.4
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.......++||+|+.. |+.+.+..++ + .+.+++..|.+|.||||.|+..|+.+++++|++.++. ... .
T Consensus 34 g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll-~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~-~~~---~ 106 (237)
T 3b7b_A 34 GANIDTCSEDQRTPLMEAAEN-NHLEAVKYLI-K-AGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM-DVN---C 106 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH-T-TTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC-CTT---C
T ss_pred CCCcCccCCCCCCHHHHHHHh-CCHHHHHHHH-h-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-Ccc---c
Confidence 344444455567788888887 7766444444 3 2556677788888888888888888888888888754 333 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHH
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDE 138 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~ 138 (363)
.|..|+||||+|+. +..++.+|.+|+||||+|+..++.++++.+ +.+++.+...
T Consensus 107 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 78888888888886 345677788888888888887766554211 2234433322
Q ss_pred HHHHHHhhhhccc-cccccCCCCCCCHHHHHHHhc
Q 041634 139 LLWYERVKSVTMA-HFLNHGNNMGFTPEELFATAN 172 (363)
Q Consensus 139 l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~~ 172 (363)
-...+.++..+.. ...+.+|++|+||++++....
T Consensus 187 ~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 187 ENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred hCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 2222222222211 235678889999998876544
No 15
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.76 E-value=6.6e-18 Score=150.87 Aligned_cols=153 Identities=17% Similarity=0.089 Sum_probs=109.5
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCc
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t 91 (363)
....+++||+|+.. |+.+.+..++.. +.+.+..|.+|.||||.|+..|+.++++.|++.++. ... .+|..|+|
T Consensus 22 d~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~---~~~~~g~t 94 (223)
T 2f8y_A 22 DRTGETALHLAARY-SRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DLD---ARMHDGTT 94 (223)
T ss_dssp TTTCCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS-CTT---CCCTTCCC
T ss_pred CCCCCchHHHHHHc-CCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-Ccc---cCCCCCCc
Confidence 46678999999998 887755555544 567788899999999999999999999999999885 344 78999999
Q ss_pred HHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHHh
Q 041634 92 IQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYERV 145 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~V 145 (363)
|||+|+. +..++.+|.+|+||||+|+..++.++++.+ +.+++.....-...+.+
T Consensus 95 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 174 (223)
T 2f8y_A 95 PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHH
Confidence 9999997 456688899999999999998876654211 22344433222222223
Q ss_pred hhhccc-cccccCCCCCCCHHHHHHHh
Q 041634 146 KSVTMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 146 ~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+..+.. ...+.+|..|+||.+++.+.
T Consensus 175 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 175 KVLLDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHcCCCCccccccCCCHHHHHHHh
Confidence 222211 13466778888888887653
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.76 E-value=3.2e-18 Score=153.78 Aligned_cols=155 Identities=17% Similarity=-0.006 Sum_probs=108.9
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
......+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|
T Consensus 35 ~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g 106 (231)
T 3aji_A 35 RTDQDSRTALHWACSA-GHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VN----AVNQNG 106 (231)
T ss_dssp CCCTTSCCHHHHHHHH-TCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTS
T ss_pred cCCCCCCCHHHHHHHc-CcHHHHHHHHHh--CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CC----CCCCCC
Confidence 3455678899999988 887755555543 567778888999999999999999999999999888 44 578899
Q ss_pred CcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHH
Q 041634 90 NTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYE 143 (363)
Q Consensus 90 ~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~ 143 (363)
+||||+|+. +..++.+|.+|+||||+|+..++.++++.+ +.+++.........+
T Consensus 107 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 186 (231)
T 3aji_A 107 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHH
Confidence 999999997 345677888899999999988876654211 234444332222222
Q ss_pred Hhhhhccc-cccccCCCCCCCHHHHHHHhc
Q 041634 144 RVKSVTMA-HFLNHGNNMGFTPEELFATAN 172 (363)
Q Consensus 144 ~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~~ 172 (363)
.++-.+.. ...+.+|++|+||.+++.+.+
T Consensus 187 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 187 EAKFLVTQGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHSCHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHhhH
Confidence 22222211 135678899999999876533
No 17
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.76 E-value=3.8e-18 Score=145.07 Aligned_cols=131 Identities=20% Similarity=0.164 Sum_probs=104.9
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
...++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+. |+.+++++|++.+++ .. .+|..|+|||
T Consensus 4 ~~~~~L~~A~~~-g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L 74 (162)
T 1ihb_A 4 PWGNELASAAAR-GDLEQLTSLLQN--NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PD----LKDRTGFAVI 74 (162)
T ss_dssp -CHHHHHHHHHH-TCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TT----CCCTTSCCHH
T ss_pred hHhhHHHHHHHc-CCHHHHHHHHhC--CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CC----CCCCCCCCHH
Confidence 456899999998 998877777654 56778889999999999999 999999999999988 44 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..++.+|.+|+||||+|++.++.+++ +++..... ...+.+|.+
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g~------~~~~~~~~~ 136 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV------------EFLVKHTA------SNVGHRNHK 136 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------HHHHHHSC------CCTTCCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH------------HHHHHccC------CCCCCcCCC
Confidence 99998 456788999999999999999875443 11111111 114678999
Q ss_pred CCCHHHHHHHh
Q 041634 161 GFTPEELFATA 171 (363)
Q Consensus 161 G~Tp~dl~~~~ 171 (363)
|+||++++.+.
T Consensus 137 g~t~l~~A~~~ 147 (162)
T 1ihb_A 137 GDTACDLARLY 147 (162)
T ss_dssp SCCHHHHHHHT
T ss_pred CCcHHHHHHHc
Confidence 99999998764
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.75 E-value=1.7e-18 Score=159.64 Aligned_cols=110 Identities=19% Similarity=0.122 Sum_probs=71.4
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCch------------
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSL------------ 79 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~------------ 79 (363)
...+.++||+|+.. |+.+.+..|+.. +.+++.+|.+|.||||+|+..|+.++++.|++.+++ ..
T Consensus 42 ~~~g~t~L~~A~~~-g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 42 NDLGQTALHLAAIL-GEASTVEKLYAA--GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPS-HPRDASDTYLTQSQ 117 (282)
T ss_dssp CTTSCCHHHHHHHH-TCHHHHHHHHHT--TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCS-SCCCC---------
T ss_pred CCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCC-CchhhHHHHhhccc
Confidence 34566788888876 776644444433 556677777777777777777777777777776543 10
Q ss_pred -------------------------------hhhhccCCCCCcHHHHHHh-------------chhhccccCC-CCcHHH
Q 041634 80 -------------------------------DKMTRQNKAGNTIQHETAT-------------RRLVRKIDYN-GNTILH 114 (363)
Q Consensus 80 -------------------------------~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~-GnT~LH 114 (363)
..+..+|..|+||||+|+. +..++.+|.. |+||||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 0123667777777777776 3445666643 777777
Q ss_pred HHHhhCcccCc
Q 041634 115 MAGIKIKDYGS 125 (363)
Q Consensus 115 lAa~~~~~~~~ 125 (363)
+|+..++.+++
T Consensus 198 ~A~~~~~~~~v 208 (282)
T 1oy3_D 198 LAVEAQAASVL 208 (282)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHcCCHHHH
Confidence 77777765544
No 19
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.75 E-value=4.6e-18 Score=149.45 Aligned_cols=23 Identities=17% Similarity=0.082 Sum_probs=17.1
Q ss_pred ccccCCCCCCCHHHHHHHh-cHHH
Q 041634 153 FLNHGNNMGFTPEELFATA-NNEL 175 (363)
Q Consensus 153 ~~~~~N~~G~Tp~dl~~~~-~~~l 175 (363)
..+.+|++|+||++++.+. +.++
T Consensus 170 ~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 170 DQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCccCCCCCCHHHHHHHcCCHhH
Confidence 3578899999999998754 4443
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.75 E-value=2.4e-18 Score=154.09 Aligned_cols=154 Identities=17% Similarity=-0.005 Sum_probs=88.9
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccc-cCcCCCcHHhHHHhcCcHHHHHHHHHhC--CCCchhhhhccCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYV-FTIHDDTVLLMATYTKKSDLVIKLLDEL--PDQSLDKMTRQNK 87 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~-~d~~G~TpLh~Aa~~G~~eiV~~LL~~~--p~~~~~~~~~~d~ 87 (363)
....++++||+|+.. |+.+.+..++....+.+... .|..|.||||.|+..|+.++++.|++.+ ++ .. .+|.
T Consensus 32 ~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~----~~~~ 105 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSF-QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LN----KITN 105 (228)
T ss_dssp CCTTSCCHHHHHHHT-TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TT----CCCT
T ss_pred CCCCCCCHHHHHHHc-CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cc----cCCc
Confidence 344556677777766 66654444444432344444 6666777777777777777777777766 44 22 4666
Q ss_pred CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc--------------CCchhhhHHHHH
Q 041634 88 AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM--------------EGPALLLRDELL 140 (363)
Q Consensus 88 ~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~--------------~~~al~l~~~l~ 140 (363)
.|+||||+|+. +..++.+|.+|+||||+|+..++.++++.+ +.+++.......
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 77777777765 344566667777777777766655443211 122333322212
Q ss_pred HHHHhhhhc-c-ccccccCCCCCCCHHHHHHH
Q 041634 141 WYERVKSVT-M-AHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 141 ~~~~V~~~~-~-~~~~~~~N~~G~Tp~dl~~~ 170 (363)
..+.++..+ . ....+.+|++|+||.+++.+
T Consensus 186 ~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 186 HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred CHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 222233222 1 22467889999999999754
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.75 E-value=7.3e-18 Score=151.70 Aligned_cols=147 Identities=20% Similarity=0.149 Sum_probs=108.6
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchh-hhhccCCCCCcHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLD-KMTRQNKAGNTIQ 93 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~-~~~~~d~~G~t~L 93 (363)
++++||.|+.. |+.+.+..++.. .+.+++.+|.+|.||||+|+..|+.++++.|++.+++ ... ....+|..|+|||
T Consensus 3 g~t~L~~A~~~-g~~~~v~~Ll~~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 3 WESPLLLAAKE-NDVQALSKLLKF-EGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE-LVFEPMTSELYEGQTAL 79 (232)
T ss_dssp TTCHHHHHHHT-TCHHHHHHHHTT-TCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCCCCSTTTTTCCHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCch-hccccccccCCCCcCHH
Confidence 56899999998 988866666654 5678889999999999999999999999999999987 321 1115678999999
Q ss_pred HHHHh-------------chhhcccc-------------CCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhh
Q 041634 94 HETAT-------------RRLVRKID-------------YNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKS 147 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D-------------~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~ 147 (363)
|+|+. +..++.+| .+|+||||+|+..|+.+++ +++....+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~ga-- 145 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIV------------RLLIEHGA-- 145 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHH------------HHHHHTTC--
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHH------------HHHHHCCC--
Confidence 99998 23344444 4899999999999976544 11111111
Q ss_pred hccccccccCCCCCCCHHHHHHHh-cHHHHHhhHHHH
Q 041634 148 VTMAHFLNHGNNMGFTPEELFATA-NNELRAQSKEWL 183 (363)
Q Consensus 148 ~~~~~~~~~~N~~G~Tp~dl~~~~-~~~l~~~~~~~~ 183 (363)
..+.+|.+|.||++++... +.+..++.-+++
T Consensus 146 -----~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~L 177 (232)
T 2rfa_A 146 -----DIRAQDSLGNTVLHILILQPNKTFACQMYNLL 177 (232)
T ss_dssp -----CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHH
Confidence 2578899999999998763 444443333443
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=2.1e-18 Score=161.04 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=37.9
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHH
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHE 95 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~ 95 (363)
+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++|+.|++.+++ .. .+|..|+||||+
T Consensus 41 ~t~l~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~~~~g~tpL~~ 112 (299)
T 1s70_B 41 GAVFLAACSS-GDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGAN-IN----QPDNEGWIPLHA 112 (299)
T ss_dssp HHHHHHHHHH-TCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCHHHH
T ss_pred ccHHHHHHHc-CCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----CCCCCCCcHHHH
Confidence 3455555554 555544444433 234444555555555555555555555555555544 22 345555555555
Q ss_pred HHh
Q 041634 96 TAT 98 (363)
Q Consensus 96 Aa~ 98 (363)
|+.
T Consensus 113 A~~ 115 (299)
T 1s70_B 113 AAS 115 (299)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 23
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.74 E-value=2e-18 Score=165.11 Aligned_cols=140 Identities=19% Similarity=0.054 Sum_probs=101.7
Q ss_pred CCCcccc-ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc---HHHHHHHHHhCCCCch
Q 041634 4 IGIEDTD-AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKK---SDLVIKLLDELPDQSL 79 (363)
Q Consensus 4 ~~~~~~~-~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~---~eiV~~LL~~~p~~~~ 79 (363)
.|.+.+. ....+.++||+|+.. |+.+.+ ++|++ .+.+++.+|.+|.||||+|+..|+ .++++.|++.... ..
T Consensus 119 ~g~dvn~~~d~~g~TpLh~Aa~~-g~~~~v-~~Ll~-~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~-~~ 194 (327)
T 1sw6_A 119 TQLNLNIPVDEHGNTPLHWLTSI-ANLELV-KHLVK-HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP-CL 194 (327)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHT-TCHHHH-HHHHH-TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG-GG
T ss_pred cCCCcccccCCCCCcHHHHHHHc-CCHHHH-HHHHH-cCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc-cc
Confidence 4555555 566788899999987 877644 44444 257788889999999999999998 6788888887643 23
Q ss_pred hhhhccCCCCCcHHHHHHh---------------ch--------------------------------------------
Q 041634 80 DKMTRQNKAGNTIQHETAT---------------RR-------------------------------------------- 100 (363)
Q Consensus 80 ~~~~~~d~~G~t~LH~Aa~---------------~~-------------------------------------------- 100 (363)
. .+|..|+||||+|+. ..
T Consensus 195 ~---~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~L 271 (327)
T 1sw6_A 195 I---LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 271 (327)
T ss_dssp G---EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred c---CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHH
Confidence 3 789999999999884 00
Q ss_pred ---hhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHH
Q 041634 101 ---LVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFA 169 (363)
Q Consensus 101 ---lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~ 169 (363)
.+|.+|.+|+||||+|++.|+.+++ +++....+ ..+.+|++|+||++++.
T Consensus 272 l~~~~n~~d~~G~TpLh~A~~~g~~~~v------------~~Ll~~Ga-------d~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 272 IANMLNAQDSNGDTCLNIAARLGNISIV------------DALLDYGA-------DPFIANKSGLRPVDFGA 324 (327)
T ss_dssp HHHTTTCCCTTSCCHHHHHHHHCCHHHH------------HHHHHTTC-------CTTCCCTTSCCGGGGTC
T ss_pred HHhCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-------CCcccCCCCCCHHHHHH
Confidence 3778888899999999988876544 12212222 25788999999998764
No 24
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.74 E-value=1.4e-17 Score=148.82 Aligned_cols=135 Identities=19% Similarity=0.050 Sum_probs=95.3
Q ss_pred HHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------
Q 041634 32 VSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT------------- 98 (363)
Q Consensus 32 v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~------------- 98 (363)
+++.|.+.........|.+|.||||.|++.|+.++++.|++.+++ .. .+|..|+||||+|+.
T Consensus 6 ~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-AN----IQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp CEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred HHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 444455544433345589999999999999999999999999988 44 689999999999997
Q ss_pred -chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHHhhhhccc-cccccCCCCCCC
Q 041634 99 -RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYERVKSVTMA-HFLNHGNNMGFT 163 (363)
Q Consensus 99 -~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~V~~~~~~-~~~~~~N~~G~T 163 (363)
...++.+|.+|+||||+|+..++.++++.+ +.+++.........+.++..+.. ...+.+|.+|.|
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET 160 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence 226678899999999999999887665321 22344433222222233322221 245678899999
Q ss_pred HHHHHHHh
Q 041634 164 PEELFATA 171 (363)
Q Consensus 164 p~dl~~~~ 171 (363)
|++++...
T Consensus 161 ~L~~A~~~ 168 (223)
T 2f8y_A 161 PLFLAARE 168 (223)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99998653
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.74 E-value=1e-17 Score=153.68 Aligned_cols=143 Identities=19% Similarity=0.041 Sum_probs=91.4
Q ss_pred HHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh---
Q 041634 22 ALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT--- 98 (363)
Q Consensus 22 A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~--- 98 (363)
+... ++.+ +++.|++.........|.+|.||||+|++.|+.++|+.|++.+++ .. .+|..|+||||+|+.
T Consensus 30 ~~~~-~~~~-~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~ 102 (253)
T 1yyh_A 30 EEEE-DAPA-VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-AN----IQDNMGRTPLHAAVSADA 102 (253)
T ss_dssp ------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCHHHHHHHHTC
T ss_pred hhcC-CChH-HHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CC----CCCCCCCCHHHHHHHcCC
Confidence 4443 5555 555555544444456689999999999999999999999999988 44 689999999999997
Q ss_pred ----------c-hhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHHhhhhccc-cc
Q 041634 99 ----------R-RLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYERVKSVTMA-HF 153 (363)
Q Consensus 99 ----------~-~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~V~~~~~~-~~ 153 (363)
+ ..++.+|.+|+||||+|+..++.++++.+ +.+++.........+.++..+.. ..
T Consensus 103 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 182 (253)
T 1yyh_A 103 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 182 (253)
T ss_dssp HHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 2 26788899999999999999987765322 23445443322223333322222 24
Q ss_pred cccCCCCCCCHHHHHHHh
Q 041634 154 LNHGNNMGFTPEELFATA 171 (363)
Q Consensus 154 ~~~~N~~G~Tp~dl~~~~ 171 (363)
.+.+|++|+||++++...
T Consensus 183 ~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 183 KDMQNNREETPLFLAARE 200 (253)
T ss_dssp TTCCCTTSCCHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHC
Confidence 678899999999998653
No 26
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.74 E-value=9.4e-18 Score=144.39 Aligned_cols=109 Identities=15% Similarity=-0.020 Sum_probs=92.8
Q ss_pred ccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 9 TDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 9 ~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
+......+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .+|..
T Consensus 30 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~ 101 (172)
T 3v30_A 30 NKPDERGFTPLIWASAF-GEIETVRFLLEW--GADPHILAKERESALSLASTGGYTDIVGLLLERDVD-IN----IYDWN 101 (172)
T ss_dssp GCCCTTSCCHHHHHHHT-TCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TT----CCCTT
T ss_pred cCCCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CC----CCCCC
Confidence 34455678999999998 888766655544 567888999999999999999999999999999988 44 68999
Q ss_pred CCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 89 GNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 89 G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|+||||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 102 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 102 GGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHH
Confidence 9999999997 456788999999999999999976554
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.74 E-value=6.3e-18 Score=155.89 Aligned_cols=109 Identities=17% Similarity=-0.046 Sum_probs=65.8
Q ss_pred ccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC
Q 041634 7 EDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 7 ~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
+.+.....++++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .+
T Consensus 28 ~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-----~~ 98 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLG-GHLSCVKILLKH--GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQ-----PE 98 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SS-----CS
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC-----CC
Confidence 3334444556667777665 665533333332 455666666667777777777777777777766665 22 24
Q ss_pred CCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 87 KAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 87 ~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
.+|+||||+|+. +..++.+|.+|+||||+|+..++.++
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHH
Confidence 456677776665 34456677777777777777665543
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.73 E-value=9e-18 Score=154.70 Aligned_cols=154 Identities=19% Similarity=0.074 Sum_probs=110.0
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCC-CcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPD-HALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~-~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
....++++||+|+.. |+.+.+..++..... ..++.+|.+|.||||+|+..|+.++|+.|++++++ .. .+|..|
T Consensus 5 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~~~~g 78 (282)
T 1oy3_D 5 VTEDGDTALHLAVIH-QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VL----VAERGG 78 (282)
T ss_dssp CCTTCCCHHHHHHHT-TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SS----CCCTTS
T ss_pred cCCCCCcHHHHHHHc-CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CCCCCC
Confidence 345678999999998 988866666654222 12778899999999999999999999999999998 54 689999
Q ss_pred CcHHHHHHh-------------c-----------------------------------------------hhhccccCCC
Q 041634 90 NTIQHETAT-------------R-----------------------------------------------RLVRKIDYNG 109 (363)
Q Consensus 90 ~t~LH~Aa~-------------~-----------------------------------------------~lin~~D~~G 109 (363)
+||||+|+. + ..++.+|.+|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 999999997 0 1267789999
Q ss_pred CcHHHHHHhhCcccCcccc--------------CCchhhhHHHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHH
Q 041634 110 NTILHMAGIKIKDYGSEKM--------------EGPALLLRDELLWYERVKSVTMA-HFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 110 nT~LHlAa~~~~~~~~~~~--------------~~~al~l~~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~ 170 (363)
+||||+|++.|+.++++.+ +.+++.+..+....+.|+..+.. ...+.+|.+|+||++++..
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 9999999999887655211 22444433222222223222211 1356677778888777664
No 29
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.73 E-value=1.8e-17 Score=157.11 Aligned_cols=87 Identities=14% Similarity=-0.056 Sum_probs=56.5
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.+.+.+.....++++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++++.|++++++ ..
T Consensus 47 ~~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~---- 118 (351)
T 3utm_A 47 LNVNCHASDGRKSTPLHLAAGY-NRVRIVQLLLQH--GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VN---- 118 (351)
T ss_dssp TTTTCCCSSTTCCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----
T ss_pred cCCCcccCCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CC----
Confidence 3444444455566777777776 666544444333 456666777777777777777777777777777766 33
Q ss_pred ccCCCCCcHHHHHHh
Q 041634 84 RQNKAGNTIQHETAT 98 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~ 98 (363)
.+|..|+||||+|+.
T Consensus 119 ~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 119 AMDLWQFTPLHEAAS 133 (351)
T ss_dssp CCCTTCCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHH
Confidence 466777777777775
No 30
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.73 E-value=8.6e-18 Score=148.60 Aligned_cols=146 Identities=12% Similarity=0.031 Sum_probs=109.4
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhcCcH----HHHHHHHHhCCCCchhhhhccCCCC
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYTKKS----DLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~----eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
..++||.|+.. |+.+.+..++... .+..+ .+|+||||+|+.+|+. +++++||+++++ +. .+|..|
T Consensus 6 ~~~~l~~Aa~~-g~~~~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn----~~d~~g 75 (186)
T 3t8k_A 6 EYRTVSAAAML-GTYEDFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IK----SRTKEG 75 (186)
T ss_dssp HCSSHHHHHHH-SCHHHHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SS----CCCTTC
T ss_pred cccHHHHHHHc-CCHHHHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CC----CCCCCC
Confidence 34689999998 9999988887662 23344 7799999999999975 599999999998 55 689999
Q ss_pred CcHHHHHHh-------------------chhhccccCCCC-cHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhc
Q 041634 90 NTIQHETAT-------------------RRLVRKIDYNGN-TILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVT 149 (363)
Q Consensus 90 ~t~LH~Aa~-------------------~~lin~~D~~Gn-T~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~ 149 (363)
+||||+|+. +..+|.+|.+|+ ||||+|+..+.... ...+.++-.+
T Consensus 76 ~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~---------------~~~~iv~~Ll 140 (186)
T 3t8k_A 76 TTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN---------------EMIPLYKLIF 140 (186)
T ss_dssp CCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH---------------HHHHHHHHHH
T ss_pred CcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh---------------hHHHHHHHHH
Confidence 999999975 566899999999 99999998553210 0001111111
Q ss_pred c--ccccccCCCCCCCHHHHHHH-hcHHHHHhhHHHHhh
Q 041634 150 M--AHFLNHGNNMGFTPEELFAT-ANNELRAQSKEWLIR 185 (363)
Q Consensus 150 ~--~~~~~~~N~~G~Tp~dl~~~-~~~~l~~~~~~~~k~ 185 (363)
. ....+.+|++|+||++++.+ .+.+..+..+++.++
T Consensus 141 ~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 141 SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1 22478999999999999976 455666666666654
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.72 E-value=2.1e-17 Score=145.28 Aligned_cols=132 Identities=18% Similarity=0.113 Sum_probs=107.3
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
..++||.|+.. |+.+.+..++.+ .+.+++..|.+|.||||+|++.|+.++++.|++.+++ .. .+|..|+||||
T Consensus 5 ~~~~L~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~l~ 77 (201)
T 3hra_A 5 EVGALLEAANQ-RDTKKVKEILQD-TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-IN----LQNSISDSPYL 77 (201)
T ss_dssp CTTHHHHHHHT-TCHHHHHHHHTC-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCHHH
T ss_pred cccHHHHHHHh-ccHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CCCCCCCCHHH
Confidence 45789999998 999988888876 4557888999999999999999999999999999988 44 68999999999
Q ss_pred HHHh--------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 95 ETAT--------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 95 ~Aa~--------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
+|+. +..++.+|.+|+||||+|+..++.+++ +++.... +...+.+|.+
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g------~~~~~~~~~~ 139 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNV------------KLLLEDG------REDIDFQNDF 139 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHH------------HHHHHHC------CCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHH------------HHHHHcC------CCCcCCCCCC
Confidence 9997 345688999999999999999876543 1111111 1125788999
Q ss_pred CCCHHHHHHHh
Q 041634 161 GFTPEELFATA 171 (363)
Q Consensus 161 G~Tp~dl~~~~ 171 (363)
|.||++++...
T Consensus 140 g~t~L~~A~~~ 150 (201)
T 3hra_A 140 GYTALIEAVGL 150 (201)
T ss_dssp SCCHHHHHHHS
T ss_pred CCCHHHHHHHh
Confidence 99999998753
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.72 E-value=2.3e-17 Score=147.61 Aligned_cols=151 Identities=20% Similarity=0.077 Sum_probs=111.5
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhC--CCCchhhhhccCCCCCcH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDEL--PDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~--p~~~~~~~~~~d~~G~t~ 92 (363)
.+++||+|+.. |+.+.+..++.. ........|.+|.||||.|+..|+.++++.|++.+ ++ ... ..|..|+||
T Consensus 2 g~t~L~~A~~~-g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~---~~~~~g~t~ 75 (228)
T 2dzn_A 2 SNYPLHQACME-NEFFKVQELLHS-KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDD---YPDDSGWTP 75 (228)
T ss_dssp -CCHHHHHHHT-TCHHHHHHHHHH-CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGG---CCCTTSCCH
T ss_pred CccHHHHHHHh-CCHHHHHHHHhc-CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccc---cCCCCCCCH
Confidence 46899999998 998877777765 44555668999999999999999999999999999 55 332 489999999
Q ss_pred HHHHHh-------------c--hhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHH
Q 041634 93 QHETAT-------------R--RLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYER 144 (363)
Q Consensus 93 LH~Aa~-------------~--~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~ 144 (363)
||+|+. + ..++.+|.+|+||||+|+..++.++++.+ +.+++.....-...+.
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 999997 2 56788899999999999999877655311 2344443322222233
Q ss_pred hhhhccc--cccccCCCCCCCHHHHHHHh
Q 041634 145 VKSVTMA--HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 145 V~~~~~~--~~~~~~N~~G~Tp~dl~~~~ 171 (363)
++..+.. ...+.+|.+|.||++++...
T Consensus 156 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp HHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 3322221 23577899999999998653
No 33
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.72 E-value=3e-18 Score=145.84 Aligned_cols=128 Identities=13% Similarity=-0.066 Sum_probs=90.4
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
..+...++||+|+.. |+.+.+..++.. +.+++..|.+|.||||+|+ .|+.+++++|++.+++ .. .+|..|+
T Consensus 8 ~~~~~~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~----~~d~~g~ 78 (156)
T 1bi7_B 8 SMEPSADWLATAAAR-GRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PN----CADPATL 78 (156)
T ss_dssp --CCSTTHHHHHHHH-TCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CC----CCCTTTC
T ss_pred CCccchHHHHHHHHc-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CC----CcCCCCC
Confidence 445567899999998 998866666644 6678889999999999985 9999999999999988 44 6899999
Q ss_pred c-HHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcccccccc
Q 041634 91 T-IQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNH 156 (363)
Q Consensus 91 t-~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~ 156 (363)
| |||+|+. +..++.+|.+|+||||+|+..++.++++ ++..... ..+.
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~------------~Ll~~ga-------~~~~ 139 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR------------YLRAAAG-------GTRG 139 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHH------------HHSSCC------------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHH------------HHHHcCC-------CCCc
Confidence 9 9999997 5567899999999999999998765441 1111111 2467
Q ss_pred CCCCCCCHHH
Q 041634 157 GNNMGFTPEE 166 (363)
Q Consensus 157 ~N~~G~Tp~d 166 (363)
+|..|.||.+
T Consensus 140 ~~~~g~t~~~ 149 (156)
T 1bi7_B 140 SNHARIDAAE 149 (156)
T ss_dssp ----------
T ss_pred cCcCcCcccc
Confidence 7888888866
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.72 E-value=2.8e-17 Score=147.53 Aligned_cols=150 Identities=19% Similarity=0.070 Sum_probs=114.4
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
.+++||.|+.. |+.+.+..++.. .....+..|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+||||
T Consensus 6 ~~~~l~~A~~~-g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~ 78 (231)
T 3aji_A 6 SNIMICNLAYS-GKLDELKERILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VN----DKDDAGWSPLH 78 (231)
T ss_dssp SSSHHHHHHHH-TCHHHHHHHHHH-CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SC----CCCTTSCCHHH
T ss_pred ccchHHHHHHh-CCHHHHHHHHHh-chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CC----CcCCCCCCHHH
Confidence 56799999998 999988888877 4455778899999999999999999999999999988 44 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHHHhhhh
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYERVKSV 148 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~~V~~~ 148 (363)
+|+. +..++.+|.+|+||||+|+..++.++++.+ +.+++.....-...+.++..
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9998 456788999999999999999877655311 22344433222222333322
Q ss_pred ccc-cccccCCCCCCCHHHHHHHh
Q 041634 149 TMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 149 ~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+.. ...+.+|.+|+||++++...
T Consensus 159 l~~g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 159 LFYKASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred HhcCCCccccCCCCCCHHHHHHHC
Confidence 221 24567889999999998653
No 35
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.72 E-value=1.2e-17 Score=150.50 Aligned_cols=114 Identities=18% Similarity=0.048 Sum_probs=87.3
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCC----CCch
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELP----DQSL 79 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p----~~~~ 79 (363)
.+.+.+.......++||+|+.. |+.+.+..++ + .+.+.+..|.+|.||||.|+..|+.++++.|++.++ + ..
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll-~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~ 110 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVIT-TLPSVVRLLV-T-AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LE 110 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHT-TCHHHHHHHH-H-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TT
T ss_pred cCCCCCcccccCCCHHHHHHHc-CCHHHHHHHH-H-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-cc
Confidence 3445555556678899999987 8777554444 4 356777888899999999999999999999999887 4 22
Q ss_pred hhhhccCCCCCcHHHHHHh-------------chhhcccc-CCCCcHHHHHHhhCcccCc
Q 041634 80 DKMTRQNKAGNTIQHETAT-------------RRLVRKID-YNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 80 ~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D-~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|..|+||||+|+. +..++.+| .+|+||||+|++.++.+++
T Consensus 111 ----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (241)
T 1k1a_A 111 ----ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166 (241)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred ----ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHH
Confidence 678899999999987 34556677 7899999999988876654
No 36
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.72 E-value=1.1e-17 Score=139.07 Aligned_cols=108 Identities=19% Similarity=0.059 Sum_probs=90.9
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
.......++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ +. .+|..|
T Consensus 9 ~~~~~~~t~l~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~d~~g 80 (136)
T 2jab_A 9 HHGSDLGKKLLEAARA-GQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VN----AVDAIG 80 (136)
T ss_dssp ---CHHHHHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTC
T ss_pred cccccccHHHHHHHHh-CCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----cCCCCC
Confidence 3445577899999998 998866666654 567888999999999999999999999999999988 54 689999
Q ss_pred CcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 90 NTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 90 ~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+||||+|+. +..++.+|.+|+||||+|++.++.+++
T Consensus 81 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 81 FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHH
Confidence 999999998 456788999999999999999876543
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.71 E-value=9.5e-18 Score=151.73 Aligned_cols=140 Identities=18% Similarity=0.049 Sum_probs=100.9
Q ss_pred cccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCc--hhhhhcc
Q 041634 8 DTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQS--LDKMTRQ 85 (363)
Q Consensus 8 ~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~--~~~~~~~ 85 (363)
.+......+++||+|+.. |+.+ ++++|++ .+.+++.+|.+|.||||+|+..|+.++++.|++.+++ . ...+...
T Consensus 38 ~~~~~~~g~t~L~~A~~~-~~~~-~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~ 113 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVIT-NQPE-IAEALLG-AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT-PHLHSILKAT 113 (236)
T ss_dssp CCCCCTTCCCHHHHHHHT-TCHH-HHHCCCS-CCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTT-TSSSCGGGCC
T ss_pred hhccCCCCCCHHHHHHHc-CCHH-HHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhHHHHhhcc
Confidence 334445577899999987 7766 5555555 3567778888899999999999999999999988753 1 0012267
Q ss_pred CCCCCcHHHHHHh-------------chhhccccC-CCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccc
Q 041634 86 NKAGNTIQHETAT-------------RRLVRKIDY-NGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMA 151 (363)
Q Consensus 86 d~~G~t~LH~Aa~-------------~~lin~~D~-~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~ 151 (363)
|..|+||||+|+. +..++.+|. +|+||||+|+..++.+++ +++....
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v------------~~Ll~~g------- 174 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLV------------SLLLKCG------- 174 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHH------------HHHHTTT-------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcC-------
Confidence 8889999999987 456677887 899999999988875443 1111111
Q ss_pred cccccCCCCCCCHHHHHHH
Q 041634 152 HFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 152 ~~~~~~N~~G~Tp~dl~~~ 170 (363)
...+.+|..|+||++++..
T Consensus 175 a~~~~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 175 ADVNRVTYQGYSPYQLTWG 193 (236)
T ss_dssp CCSCCCCTTCCCGGGGCTT
T ss_pred CCCCcccCCCCCHHHHHHc
Confidence 1357889999999999765
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.71 E-value=4.6e-17 Score=160.41 Aligned_cols=154 Identities=18% Similarity=0.040 Sum_probs=94.1
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
.......++||.|+.. |+.+.+..++.. +.+.+..|.+|.||||.|++.|+.++|+.|++.+++ .. .+|..|
T Consensus 207 ~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~----~~~~~g 278 (437)
T 1n11_A 207 SPAWNGYTPLHIAAKQ-NQVEVARSLLQY--GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GN----LGNKSG 278 (437)
T ss_dssp CCCTTCCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TT----CCCTTC
T ss_pred CcCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CC----CCCCCC
Confidence 3344456777777776 666644444433 445666677777777777777777777777777766 33 567777
Q ss_pred CcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHH
Q 041634 90 NTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYE 143 (363)
Q Consensus 90 ~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~ 143 (363)
+||||+|+. +..++.+|..|+||||+|+..|+.++++.+ +.+++.....-...+
T Consensus 279 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~ 358 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 358 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHH
Confidence 777777776 344566777777777777777665544211 223444332222222
Q ss_pred Hhhhhcc-ccccccCCCCCCCHHHHHHHh
Q 041634 144 RVKSVTM-AHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 144 ~V~~~~~-~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
.|+-.+. ....+.+|++|+||++++.+.
T Consensus 359 iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 359 IVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 2222221 113577899999999998764
No 39
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.71 E-value=8.4e-18 Score=139.78 Aligned_cols=111 Identities=11% Similarity=-0.055 Sum_probs=93.5
Q ss_pred CccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhcc
Q 041634 6 IEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQ 85 (363)
Q Consensus 6 ~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~ 85 (363)
.+.+......+++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||.|+. |+.+++++|++.+++ .. .+
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~----~~ 73 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAAR-GQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PN----CA 73 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SS----CC
T ss_pred CCccCCCCCCccHHHHHHHc-CCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CC----Cc
Confidence 34445556678999999998 888866666654 56788899999999999999 999999999999998 54 68
Q ss_pred CCC-CCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 86 NKA-GNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 86 d~~-G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|.. |+||||+|+. +..++.+|.+|+||||+|++.++.+++
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~ 127 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIA 127 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 888 9999999997 456789999999999999999876543
No 40
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=154.79 Aligned_cols=142 Identities=15% Similarity=0.016 Sum_probs=108.1
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHH-----hcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMAT-----YTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa-----~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
.....++++||+|+.. |+.+.+ ++|++....+++..|.+|.||||.|+ ..|+.++++.|++.+.+ .. .
T Consensus 106 ~~d~~g~T~Lh~A~~~-g~~~~v-~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~----~ 178 (276)
T 4hbd_A 106 IADSNGNTALHYSVSH-ANFPVV-QQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-NA----K 178 (276)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHH-HHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TC----C
T ss_pred CCCCCCCCHHHHHHHC-CCHHHH-HHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-cc----c
Confidence 3455678999999987 887754 44455454588889999999999999 77999999999999866 33 5
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMA 151 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~ 151 (363)
.|..|+||||+|+. +..+|.+|.+|+||||+|+..|+.++++ ++.. ...
T Consensus 179 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~------------~Ll~------~~g 240 (276)
T 4hbd_A 179 ASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG------------LLLA------VPS 240 (276)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH------------HHHT------STT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH------------HHHh------cCC
Confidence 78899999999997 5677899999999999999998765441 1111 011
Q ss_pred cccccCCCCCCCHHHHHHHh-cHHHH
Q 041634 152 HFLNHGNNMGFTPEELFATA-NNELR 176 (363)
Q Consensus 152 ~~~~~~N~~G~Tp~dl~~~~-~~~l~ 176 (363)
...+.+|++|+||++++.+. +.++.
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHH
Confidence 23578899999999998764 44443
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=2.4e-17 Score=154.41 Aligned_cols=151 Identities=15% Similarity=0.011 Sum_probs=98.0
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
......+++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++|+.|++.+++ .. .+|..|
T Consensus 54 ~~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~~~~g 125 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIH-GHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VN----GVTADW 125 (285)
T ss_dssp SSSCCSCCHHHHHHHT-TCHHHHHHHHHT--TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SS----CCCTTC
T ss_pred CCCccCCCHHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CC----CCCCCC
Confidence 3455577899999987 887765555554 566788888999999999999999999999998887 44 578889
Q ss_pred CcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHHH
Q 041634 90 NTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWYE 143 (363)
Q Consensus 90 ~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~~ 143 (363)
+||||+|+. +..++ .+.+|+||||+|+..|+.++++.+ +.+++.........+
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 999999987 11222 344577777777777765544211 223443332222222
Q ss_pred Hhhhhcccc-ccccCCCCCCCHHHHHHH
Q 041634 144 RVKSVTMAH-FLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 144 ~V~~~~~~~-~~~~~N~~G~Tp~dl~~~ 170 (363)
.|+..+... ..+ .|++|.||++++..
T Consensus 205 ~v~~Ll~~ga~~~-~~~~g~t~L~~A~~ 231 (285)
T 3d9h_A 205 CVKKLLESGADVN-QGKGQDSPLHAVVR 231 (285)
T ss_dssp HHHHHHHTTCCTT-CCBTTBCHHHHHHH
T ss_pred HHHHHHHCCCCCC-CCCCCCCHHHHHHH
Confidence 232222211 122 36778888888765
No 42
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.70 E-value=6e-17 Score=145.94 Aligned_cols=154 Identities=17% Similarity=-0.016 Sum_probs=114.2
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
...+..+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|
T Consensus 6 ~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g 77 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEA-GHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VD----PKDAEG 77 (237)
T ss_dssp CSSCCSCCHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CC----CCCTTS
T ss_pred cccCCCCCHHHHHHHc-CcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CC----CCCCCC
Confidence 3445678999999998 988866555544 567888899999999999999999999999999887 44 589999
Q ss_pred CcHHHHHHh-------------c-hhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhHHHHHHH
Q 041634 90 NTIQHETAT-------------R-RLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLRDELLWY 142 (363)
Q Consensus 90 ~t~LH~Aa~-------------~-~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~~~l~~~ 142 (363)
+||||+|+. + ..++.+|.+|+||||+|+..++.++++.+ +.+++.........
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 999999998 2 56678899999999999999877655321 22344433222222
Q ss_pred HHhhhhccc-cccccCCCCCCCHHHHHHHh
Q 041634 143 ERVKSVTMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 143 ~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+.++..+.. ...+.+|.+|+||++++...
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 233322221 24567888999999988653
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.70 E-value=7.4e-17 Score=150.41 Aligned_cols=139 Identities=19% Similarity=0.051 Sum_probs=102.5
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.......++||+|+.. |+.+.+ ++|++ .+.+++..|.+|.||||+|+..|+.++|++|++++++ .. .
T Consensus 63 g~~~~~~~~~g~t~L~~A~~~-g~~~~v-~~Ll~-~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~----~ 134 (299)
T 1s70_B 63 GADINYANVDGLTALHQACID-DNVDMV-KFLVE-NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VG----A 134 (299)
T ss_dssp CCCTTCBCTTCCBHHHHHHHT-TCHHHH-HHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----C
T ss_pred CCCCcccCCCCCCHHHHHHHc-CCHHHH-HHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CC----C
Confidence 344444556678999999998 887755 45555 3677888999999999999999999999999999988 44 6
Q ss_pred cCCCCCcHHHHHHhc--------------h--------------------------hhccccCCCCcHHHHHHhhCcccC
Q 041634 85 QNKAGNTIQHETATR--------------R--------------------------LVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~~--------------~--------------------------lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
+|..|+||||+|+.. . .....|.+|+||||+|+..|+.++
T Consensus 135 ~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 214 (299)
T 1s70_B 135 VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214 (299)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHH
Confidence 899999999999861 0 012356789999999999997655
Q ss_pred ccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 125 SEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 125 ~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
++ ++.... ...+.+|.+|.||++++..
T Consensus 215 v~------------~Ll~~g-------~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 215 LK------------LLIQAR-------YDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HH------------HHHTTT-------CCTTCCCTTCCCHHHHHHH
T ss_pred HH------------HHHHcC-------CCCCCcCCCCCcHHHHHHh
Confidence 41 111111 1245667777777777654
No 44
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.70 E-value=1.3e-17 Score=138.48 Aligned_cols=110 Identities=15% Similarity=0.002 Sum_probs=91.2
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.|. .....++++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.+++++|++.+++ .. .
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~ 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIK-GDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VN----T 71 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHH-TCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----C
T ss_pred CCCC-CcCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-cc----C
Confidence 3444 4456678999999998 988866665554 567888999999999999999999999999999988 44 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCccc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDY 123 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~ 123 (363)
+|..|+||||+|+. +..++.+|.+|+||||+|+..+..+
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKS 123 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHH
Confidence 89999999999997 5567899999999999999876543
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.70 E-value=8.1e-17 Score=147.35 Aligned_cols=154 Identities=16% Similarity=0.071 Sum_probs=99.5
Q ss_pred ccccccHHHHHHHHc--cCChHHHHHHhhcCCCCccc-----------ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCC
Q 041634 11 AKLKINSELYNALMI--KKDEQKVSELCRKVPDHALY-----------VFTIHDDTVLLMATYTKKSDLVIKLLDELPDQ 77 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~--~g~~~~v~~lL~~~~~~~~~-----------~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~ 77 (363)
.....+++||+|+.. .|+.+.+..++.. . .+.+ ..|.+|.||||+|+..|+.++|+.|++.+++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g-~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 115 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQI-D-KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD- 115 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-H-HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhc-C-CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 456788999999962 1555544444433 2 2221 2346799999999999999999999999988
Q ss_pred chhhhhccCCC-------------CCcHHHHHHh----------------chhhccccCCCCcHHHHHHhh--CcccCcc
Q 041634 78 SLDKMTRQNKA-------------GNTIQHETAT----------------RRLVRKIDYNGNTILHMAGIK--IKDYGSE 126 (363)
Q Consensus 78 ~~~~~~~~d~~-------------G~t~LH~Aa~----------------~~lin~~D~~GnT~LHlAa~~--~~~~~~~ 126 (363)
.. .+|.. |+||||+|+. +..+|.+|.+|+||||+|+.. ++.+..+
T Consensus 116 ~~----~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 116 VH----LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp TT----CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred CC----cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH
Confidence 54 46665 9999999997 234678999999999999984 4322000
Q ss_pred ccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh-cHHHH
Q 041634 127 KMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA-NNELR 176 (363)
Q Consensus 127 ~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~-~~~l~ 176 (363)
. ...+- +++.....+-.......+.+|++|+||++++.+. +.++.
T Consensus 192 ~----~~~iv-~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 192 L----VIHMY-DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp H----HHHHH-HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred H----HHHHH-HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence 0 00000 1121222220000001168899999999998763 44443
No 46
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.4e-17 Score=153.74 Aligned_cols=132 Identities=20% Similarity=0.089 Sum_probs=90.4
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
...++||+|+.. ++.+.++++|.+ .+.+++.+|.+|+||||+||..|+.++|++|++.+++ .. .+|.+|+|||
T Consensus 51 ~~~t~L~~a~~~-~~~~~~v~~Ll~-~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~----~~~~~g~t~l 123 (269)
T 4b93_B 51 EFCHPLCQCPKC-APAQKRLAKVPA-SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AG----ARNADQAVPL 123 (269)
T ss_dssp --------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TT----CCCTTCCCHH
T ss_pred cCCCHHHHHHHh-CCHHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cC----ccCCCCCCcc
Confidence 355789999987 776666676666 4678899999999999999999999999999999998 44 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..+|.+|.+|+||||+|+..|+.+++ +++....+ .++..|.+
T Consensus 124 ~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v------------~~Ll~~ga-------dvn~~~~~ 184 (269)
T 4b93_B 124 HLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELV------------ALLLQHGA-------SINASNNK 184 (269)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGH------------HHHHHTTC-------CTTCBCTT
T ss_pred ccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH------------HHHHHCCC-------CCCccccC
Confidence 99998 456789999999999999999987665 12211111 25788999
Q ss_pred CCCHHHHHHHh
Q 041634 161 GFTPEELFATA 171 (363)
Q Consensus 161 G~Tp~dl~~~~ 171 (363)
|.||+.++...
T Consensus 185 g~t~Lh~A~~~ 195 (269)
T 4b93_B 185 GNTALHEAVIE 195 (269)
T ss_dssp SCBHHHHHHHT
T ss_pred CCcHHHHHHHc
Confidence 99999998753
No 47
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.70 E-value=6.5e-17 Score=148.15 Aligned_cols=154 Identities=18% Similarity=0.107 Sum_probs=101.8
Q ss_pred ccccHHHHHHH---HccCChHHHHHHhhcCC---------CCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchh
Q 041634 13 LKINSELYNAL---MIKKDEQKVSELCRKVP---------DHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLD 80 (363)
Q Consensus 13 ~~ln~~Lh~A~---~~~g~~~~v~~lL~~~~---------~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~ 80 (363)
..+.++||+|+ .. |+.+.+..++.... .......|.+|.||||+|+..|+.++|+.|++.+++ ..
T Consensus 44 ~~g~t~L~~A~~~~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~- 120 (260)
T 3jxi_A 44 STGKTCLPKALLNLSA-GRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VH- 120 (260)
T ss_dssp TTCCCHHHHHHTSCBT-TBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TT-
T ss_pred CCCCcHHHHHHHHhhc-CCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cC-
Confidence 55789999999 44 77775555554311 133445566899999999999999999999999988 54
Q ss_pred hhhccC--------------CCCCcHHHHHHh-----------c-----hhhccccCCCCcHHHHHHhhCcccCccccCC
Q 041634 81 KMTRQN--------------KAGNTIQHETAT-----------R-----RLVRKIDYNGNTILHMAGIKIKDYGSEKMEG 130 (363)
Q Consensus 81 ~~~~~d--------------~~G~t~LH~Aa~-----------~-----~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~ 130 (363)
.+| ..|+||||+|+. . ..++.+|.+|+||||+|++.++...- .. .
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~-~~-~ 195 (260)
T 3jxi_A 121 ---AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRE-NT-K 195 (260)
T ss_dssp ---CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHH-HH-H
T ss_pred ---ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchh-HH-H
Confidence 466 689999999997 2 45678999999999999987753210 00 0
Q ss_pred chhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh-cHHH
Q 041634 131 PALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA-NNEL 175 (363)
Q Consensus 131 ~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~-~~~l 175 (363)
....+. +++.....+-.......+.+|++|+||++++.+. +.++
T Consensus 196 ~~~~~v-~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 196 FVTKMY-DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HHHHHH-HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHH-HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 000111 1111112210000112267899999999998763 4443
No 48
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.69 E-value=1.2e-16 Score=143.82 Aligned_cols=156 Identities=17% Similarity=0.076 Sum_probs=114.6
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhc--CCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRK--VPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNK 87 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~--~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~ 87 (363)
.....++++||+|+.. |+.+.+..++.. ..+.+++..|.+|.||||+|+..|+.+++++|++.+++ .. .+|.
T Consensus 4 ~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~ 77 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQ-GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PM----ALDR 77 (241)
T ss_dssp ---CTTCCHHHHHHHT-TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCT
T ss_pred ccCCCCCcHHHHHHHc-CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-cc----ccCC
Confidence 3456678999999998 998877777651 24667888999999999999999999999999999988 44 6899
Q ss_pred CCCcHHHHHHh-------------ch----hhccccCCCCcHHHHHHhhCcccCccc--------------cCCchhhhH
Q 041634 88 AGNTIQHETAT-------------RR----LVRKIDYNGNTILHMAGIKIKDYGSEK--------------MEGPALLLR 136 (363)
Q Consensus 88 ~G~t~LH~Aa~-------------~~----lin~~D~~GnT~LHlAa~~~~~~~~~~--------------~~~~al~l~ 136 (363)
.|+||||+|+. .. .++.+|.+|+||||+|+..++.++++. .+.+++...
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 99999999998 12 668889999999999999987765421 123444433
Q ss_pred HHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHHh
Q 041634 137 DELLWYERVKSVTMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 137 ~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
-.-...+.++..+.. ...+.+|.+|.||++++...
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 222222333322221 24577889999999998653
No 49
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.69 E-value=3.3e-17 Score=133.67 Aligned_cols=99 Identities=15% Similarity=-0.013 Sum_probs=85.5
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
..+++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.+++++|++.+++ +. .+|..|+|||
T Consensus 6 ~~~~~l~~A~~~-~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~d~~g~tpL 77 (123)
T 3aaa_C 6 MCDKEFMWALKN-GDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-IN----APDKHHITPL 77 (123)
T ss_dssp -CHHHHHHHHHT-TCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TT----CCCTTSCCHH
T ss_pred ccchHHHHHHHc-CCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CC----cCCCCCCCHH
Confidence 356899999998 998877776654 567888999999999999999999999999999988 54 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKI 120 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~ 120 (363)
|+|+. +..++.+|.+|+||||+|...+
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 99997 5567899999999999996543
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.69 E-value=3.5e-17 Score=155.06 Aligned_cols=140 Identities=19% Similarity=0.068 Sum_probs=112.1
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
|+.+.....+...++||.|+.. |+.+.+.+++.+ .+.+++..|.+|.||||+|+..|+.++|+.|++.+++ ..
T Consensus 13 ~~~~~~~~~~~~~~~L~~A~~~-g~~~~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~---- 85 (351)
T 3utm_A 13 PSAKAVLTGEYKKDELLEAARS-GNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VH---- 85 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----
T ss_pred CceeeeeeccccchhHHHHHHc-CCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----
Confidence 3444444455677899999998 999988888876 5677888999999999999999999999999999988 54
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhcc
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTM 150 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~ 150 (363)
.+|..|+||||+|+. +..++.+|.+|+||||+|+..++.+++ +++.....
T Consensus 86 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------------~~Ll~~g~----- 148 (351)
T 3utm_A 86 AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVC------------SLLLSHGA----- 148 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH------------HHHHHTTC-----
T ss_pred ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-----
Confidence 689999999999998 456788999999999999999876543 11111111
Q ss_pred ccccccCCCCCCCHHHHHH
Q 041634 151 AHFLNHGNNMGFTPEELFA 169 (363)
Q Consensus 151 ~~~~~~~N~~G~Tp~dl~~ 169 (363)
..+..|..|.||.+++.
T Consensus 149 --~~~~~~~~g~~~l~~a~ 165 (351)
T 3utm_A 149 --DPTLVNCHGKSAVDMAP 165 (351)
T ss_dssp --CTTCCCTTSCCHHHHCS
T ss_pred --CCccccCCCCcchHHHh
Confidence 24677899999988754
No 51
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.68 E-value=1.3e-16 Score=139.38 Aligned_cols=102 Identities=23% Similarity=0.179 Sum_probs=88.4
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC-CCCC
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGN 90 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d-~~G~ 90 (363)
..+.+++||.|+.. |+.+.+..++. +.+++.+|.+|.||||+|+..|+.++++.|++.+++ .. .+| ..|+
T Consensus 41 ~~~g~t~L~~A~~~-g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~----~~~~~~g~ 111 (183)
T 3deo_A 41 VSEYETPWWTAARK-ADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LD----HRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCSSSSC
T ss_pred CCCCCCHHHHHHHc-CCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----cCCCCCCC
Confidence 34677999999998 98886666665 567888999999999999999999999999999998 55 456 8999
Q ss_pred cHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcc
Q 041634 91 TIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKD 122 (363)
Q Consensus 91 t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~ 122 (363)
||||+|+. +..++.+|.+|+||||+|++.++.
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred CHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 99999997 567789999999999999988754
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.68 E-value=6e-17 Score=136.99 Aligned_cols=107 Identities=18% Similarity=-0.025 Sum_probs=91.1
Q ss_pred ccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCC
Q 041634 11 AKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 90 (363)
Q Consensus 11 ~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~ 90 (363)
.....+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+
T Consensus 30 ~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~ 101 (153)
T 1awc_B 30 TDWLGTSPLHLAAQY-GHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-VN----AKDMLKM 101 (153)
T ss_dssp CCTTCCCHHHHHHHH-TCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TT----CCCTTSC
T ss_pred cCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CC----CCCCCCC
Confidence 345577999999998 887755555543 567888999999999999999999999999999988 54 6899999
Q ss_pred cHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 91 TIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 91 t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
||||+|+. +..++.+|.+|+||||+|+..|+.+++
T Consensus 102 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 102 TALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999998 456788999999999999999976543
No 53
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=1.1e-16 Score=157.65 Aligned_cols=160 Identities=18% Similarity=0.072 Sum_probs=105.3
Q ss_pred CCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhh
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKM 82 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~ 82 (363)
++|.+.+.....+.++||.|+.. |+.+.+..++.. +.+.+..|.+|.||||.|++.|+.++|++|++.+++ +.
T Consensus 2 ~~g~~~~~~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~--g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~--- 74 (437)
T 1n11_A 2 SPGISGGGGGESGLTPLHVASFM-GHLPIVKNLLQR--GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VN--- 74 (437)
T ss_dssp -------------CCHHHHHHHH-TCHHHHHHHHHT--TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SS---
T ss_pred CCCCCccccCCCCCCHHHHHHHC-CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CC---
Confidence 56777777778889999999998 988866666654 567778889999999999999999999999999988 54
Q ss_pred hccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCcccc-------------CCchhhhH
Q 041634 83 TRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKM-------------EGPALLLR 136 (363)
Q Consensus 83 ~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~-------------~~~al~l~ 136 (363)
.+|.+|+||||+|+. +..++.+|.+|+||||+|+..|+.++++.+ +.+++...
T Consensus 75 -~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 153 (437)
T 1n11_A 75 -AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVA 153 (437)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred -CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHH
Confidence 589999999999997 455678899999999999998876654211 12333332
Q ss_pred HHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHH
Q 041634 137 DELLWYERVKSVTMA-HFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 137 ~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~ 170 (363)
......+.++..+.. ...+..+.+|.||++.+..
T Consensus 154 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 188 (437)
T 1n11_A 154 AKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVH 188 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 221112222222111 1345667778888777654
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.68 E-value=7.9e-17 Score=155.12 Aligned_cols=140 Identities=14% Similarity=-0.082 Sum_probs=102.5
Q ss_pred CCCCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhh
Q 041634 2 SSIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDK 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~ 81 (363)
+.|+.+.+......+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||+|+..|+.++|++|++.+++
T Consensus 7 ~~~~~~~~~~d~~g~t~L~~Aa~~-g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----- 78 (364)
T 3ljn_A 7 DFPKLNRIKSDDENMEKIHVAARK-GQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV----- 78 (364)
T ss_dssp ---------CCHHHHHHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-----
T ss_pred hccCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----
Confidence 346777777788889999999998 998866666654 577889999999999999999999999999999997
Q ss_pred hhccCCCCCcHHHHHHh-------chhhc---------------------------cccCCCCcHHHHHHhhC--cccCc
Q 041634 82 MTRQNKAGNTIQHETAT-------RRLVR---------------------------KIDYNGNTILHMAGIKI--KDYGS 125 (363)
Q Consensus 82 ~~~~d~~G~t~LH~Aa~-------~~lin---------------------------~~D~~GnT~LHlAa~~~--~~~~~ 125 (363)
..+.+|+||||+|+. +.++. .+|.+|+||||+|+..| +.+++
T Consensus 79 --~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 79 --HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156 (364)
T ss_dssp --CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHH
T ss_pred --ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHH
Confidence 446699999999998 12222 28999999999999998 55443
Q ss_pred cccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 126 EKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 126 ~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
+++....+ ..+.+|.+|.||++++..
T Consensus 157 ------------~~Ll~~ga-------~~~~~d~~g~t~L~~A~~ 182 (364)
T 3ljn_A 157 ------------KILVQLGA-------SPTAKDKADETPLMRAME 182 (364)
T ss_dssp ------------HHHHHHTC-------CTTCCCTTSCCHHHHHHH
T ss_pred ------------HHHHHcCC-------CCcccCCCCCCHHHHHHH
Confidence 11111111 245777888888887764
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.68 E-value=4.3e-16 Score=139.52 Aligned_cols=166 Identities=17% Similarity=0.003 Sum_probs=108.6
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+......+++||.|+.. |+.+.+..+ .+.........+..|.||||.|+..|+.++++.|++.+++ .. .
T Consensus 32 g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L-l~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~ 104 (240)
T 3eu9_A 32 GYDVRQPDKENVTLLHWAAIN-NRIDLVKYY-ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD-PS----L 104 (240)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT-TCHHHHHHH-HHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC-TT----C
T ss_pred CCCcCCCCCCCCCHHHHHHHh-CCHHHHHHH-HHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC-Cc----c
Confidence 445555556677899999987 777654444 4434333334555688999999999999999999988877 44 5
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcc-cCccc--------------cCCchhhhH
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKD-YGSEK--------------MEGPALLLR 136 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~-~~~~~--------------~~~~al~l~ 136 (363)
+|..|+||||+|+. +..++.+|.+|+||||+|+..++. .+++. -+.+++...
T Consensus 105 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A 184 (240)
T 3eu9_A 105 IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWA 184 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHH
Confidence 78889999999987 345677888899999999876653 22211 122344443
Q ss_pred HHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHHh-cHHHHH
Q 041634 137 DELLWYERVKSVTMA-HFLNHGNNMGFTPEELFATA-NNELRA 177 (363)
Q Consensus 137 ~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~-~~~l~~ 177 (363)
..-...+.++..+.. ...+.+|.+|+||.+++.+. +.++.+
T Consensus 185 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 185 VLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 222222233322221 23578899999999998764 444443
No 56
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=146.76 Aligned_cols=129 Identities=15% Similarity=-0.024 Sum_probs=98.1
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
+++++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+|||
T Consensus 2 ~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIH-GHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VN----GVTADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHH-TCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCHH
T ss_pred CCCCHHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----CCCCCCCCHH
Confidence 356899999998 998866666654 567889999999999999999999999999999988 44 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..++ .+.+|+||||+|+..|+.++++ +..... ...+..|.+
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~------------~Ll~~g-------~~~~~~~~~ 133 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVN------------SLIAYG-------GNIDHKISH 133 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSS-CSCTTCCHHHHHHHTTCHHHHH------------HHHHTT-------CCTTCCBTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCcHHHHH------------HHHHcC-------CCCCcCCCC
Confidence 99998 22223 4667999999999998765441 111111 124566777
Q ss_pred CCCHHHHHHH
Q 041634 161 GFTPEELFAT 170 (363)
Q Consensus 161 G~Tp~dl~~~ 170 (363)
|.||++++..
T Consensus 134 g~t~L~~A~~ 143 (261)
T 2xai_A 134 LGTPLYLACE 143 (261)
T ss_dssp TBCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 7788777654
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.67 E-value=1.3e-16 Score=137.31 Aligned_cols=113 Identities=18% Similarity=0.052 Sum_probs=94.7
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+......+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .
T Consensus 37 g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~ 108 (169)
T 2y1l_E 37 GADVNAEDASGWTPLHLAAFN-GHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VN----A 108 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----C
T ss_pred CCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----C
Confidence 445555566788999999998 887755555543 567888899999999999999999999999999988 44 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|..|+||||+|+. +..++.+|.+|+||||+|++.++.+++
T Consensus 109 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 89999999999998 456788999999999999999876543
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.67 E-value=1.5e-16 Score=153.15 Aligned_cols=106 Identities=16% Similarity=-0.014 Sum_probs=70.0
Q ss_pred cCcCCCcHHhHHHhcC--cHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chh-----hcccc
Q 041634 47 FTIHDDTVLLMATYTK--KSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRL-----VRKID 106 (363)
Q Consensus 47 ~d~~G~TpLh~Aa~~G--~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~l-----in~~D 106 (363)
.|.+|.||||+|+..| +.++|+.|++.+.+ .. .+|..|+||||+|+. +.. +|.+|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 208 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PT----AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN 208 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TT----CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-Cc----ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC
Confidence 5666777777777777 77777777777766 33 567777777777776 222 66777
Q ss_pred CCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh-cHHHH
Q 041634 107 YNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA-NNELR 176 (363)
Q Consensus 107 ~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~-~~~l~ 176 (363)
.+|+||||+|+..|+.+++ +++... ....+.+|++|+||++++... +.++.
T Consensus 209 ~~g~t~L~~A~~~g~~~~v------------~~Ll~~-------gad~~~~d~~g~tpL~~A~~~g~~~~v 260 (364)
T 3ljn_A 209 KQGNSHLHWAILINWEDVA------------MRFVEM-------GIDVNMEDNEHTVPLYLSVRAAMVLLT 260 (364)
T ss_dssp TTCCCTTHHHHTTTCHHHH------------HHHHTT-------TCCTTCCCTTSCCHHHHHHHTCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHH------------HHHHHc-------CCCCCCCCCCCCCHHHHHHHhChHHHH
Confidence 7777777777777765433 111111 113578899999999998764 44433
No 59
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.67 E-value=1e-16 Score=150.14 Aligned_cols=151 Identities=15% Similarity=0.023 Sum_probs=107.7
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
.....++++||+|+.. |+.+.+..++.. +.+++.. +|.||||+|+..|+.++++.|++++++ .. .+|..|
T Consensus 26 ~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~d~~g 95 (285)
T 3kea_A 26 KADVHGHSASYYAIAD-NNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLD-DS----QFDDKG 95 (285)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHHHHT--TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC-TT----CCCTTS
T ss_pred ccCCCCCCHHHHHHHc-CCHHHHHHHHhC--CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----CcCCCC
Confidence 4445678999999998 888766555544 4555555 599999999999999999999999988 54 689999
Q ss_pred CcHHHHHHh-------------chhhccccCCC-CcHHHHHHhhCcccCcccc------------CCchhhhHHHHHHHH
Q 041634 90 NTIQHETAT-------------RRLVRKIDYNG-NTILHMAGIKIKDYGSEKM------------EGPALLLRDELLWYE 143 (363)
Q Consensus 90 ~t~LH~Aa~-------------~~lin~~D~~G-nT~LHlAa~~~~~~~~~~~------------~~~al~l~~~l~~~~ 143 (363)
+||||+|+. +..++.+|.+| +||||+|+..|+.++++.+ +.+++.....-...+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVD 175 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHH
Confidence 999999997 56788999999 8999999999887665322 112333221111122
Q ss_pred Hhhhhccc-cccccCCCCCCCH-HHHHHH
Q 041634 144 RVKSVTMA-HFLNHGNNMGFTP-EELFAT 170 (363)
Q Consensus 144 ~V~~~~~~-~~~~~~N~~G~Tp-~dl~~~ 170 (363)
.++..+.. ...+.+|.+|+|| ++++..
T Consensus 176 ~v~~Ll~~gad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 176 MMILLLDYMTSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp HHHHHHHHHHHTCTTCCCBCCTTHHHHHH
T ss_pred HHHHHHHcCCCCCcccCCCCChHHHHHHH
Confidence 22222111 1357788889887 888765
No 60
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.67 E-value=9.8e-17 Score=135.59 Aligned_cols=110 Identities=15% Similarity=0.018 Sum_probs=90.8
Q ss_pred ccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC
Q 041634 7 EDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 7 ~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
+.+......+++||. +.. |+.+.+..++.. +.+++.+|.+|.||||.|+..|+.++++.|++.+++ .. .+|
T Consensus 28 ~~~~~~~~g~t~L~~-~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~ 98 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMF-GSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VN----VPD 98 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SC----CCC
T ss_pred CccccCCCCCcHHHH-HHc-CCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CC----CcC
Confidence 444455668899999 776 877755555543 677888999999999999999999999999999988 44 689
Q ss_pred CCCCcHHHHHHh------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 87 KAGNTIQHETAT------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 87 ~~G~t~LH~Aa~------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
..|+||||+|+. ...++.+|.+|+||||+|+..++.+++
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 99 GTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred CCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999998 334678999999999999999876543
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.67 E-value=1.1e-16 Score=136.73 Aligned_cols=112 Identities=15% Similarity=-0.065 Sum_probs=91.9
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.+.+..+.....+++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++++.|++.+++ ..
T Consensus 31 ~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~---- 102 (165)
T 3twr_A 31 QSVNCRDIEGRQSTPLHFAAGY-NRVSVVEYLLQH--GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VN---- 102 (165)
T ss_dssp TTTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----
T ss_pred CCCCccccccCCCCHHHHHHHc-ChHHHHHHHHhc--CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CC----
Confidence 3444455556677999999998 887755555543 667888999999999999999999999999999988 54
Q ss_pred ccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccC
Q 041634 84 RQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYG 124 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~ 124 (363)
.+|..|+||||+|+. +..++.+|.+|+||||+|.+ ++.++
T Consensus 103 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 103 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHH
Confidence 689999999999998 45678999999999999877 55443
No 62
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.66 E-value=1.9e-16 Score=143.07 Aligned_cols=142 Identities=15% Similarity=0.036 Sum_probs=107.2
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCC----CCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCch
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVP----DHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSL 79 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~----~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~ 79 (363)
.|.+.+......+++||+|+.. |+.+.+..++.... ....+..|.+|.||||+|+..|+.+++++|++.+++ ..
T Consensus 67 ~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~ 144 (236)
T 1ikn_D 67 AGCDPELRDFRGNTPLHLACEQ-GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VN 144 (236)
T ss_dssp CCCCSCCCCTTCCCHHHHHHHH-TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TT
T ss_pred cCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 3555555566788999999998 88876655555422 123567888999999999999999999999999998 55
Q ss_pred hhhhccCC-CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHh
Q 041634 80 DKMTRQNK-AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERV 145 (363)
Q Consensus 80 ~~~~~~d~-~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V 145 (363)
.+|. .|+||||+|+. +..++.+|.+|+||||+|+..++.++++ ++.....
T Consensus 145 ----~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~------------~Ll~~ga 208 (236)
T 1ikn_D 145 ----AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQ------------QLGQLTL 208 (236)
T ss_dssp ----CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHH------------HHHTTSC
T ss_pred ----CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHH------------HHHHcch
Confidence 5676 99999999998 5667899999999999999998765441 1111111
Q ss_pred hhhccccccccCCCCCCCHHHHH
Q 041634 146 KSVTMAHFLNHGNNMGFTPEELF 168 (363)
Q Consensus 146 ~~~~~~~~~~~~N~~G~Tp~dl~ 168 (363)
.......|.+|+||.|..
T Consensus 209 -----~~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 209 -----ENLQMLPESEDEESYDTE 226 (236)
T ss_dssp -----GGGSSCCCCCTTTCCCCC
T ss_pred -----hhhhcCCccchHHHHhhh
Confidence 112357788999997763
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.66 E-value=1.9e-16 Score=135.54 Aligned_cols=111 Identities=14% Similarity=-0.065 Sum_probs=93.2
Q ss_pred ccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC
Q 041634 7 EDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 7 ~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
+.+......+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .+|
T Consensus 28 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~ 99 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAH-GQIAVVEFLLQN--GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD-VN----EYD 99 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TT----CCC
T ss_pred CcCCCCCCCCCHHHHHHHC-CCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CC----cCC
Confidence 3444556678999999998 887755554443 667888899999999999999999999999999988 54 689
Q ss_pred CCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 87 KAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 87 ~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
..|+||||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999997 456788999999999999999986554
No 64
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.66 E-value=5.4e-17 Score=148.50 Aligned_cols=137 Identities=16% Similarity=0.060 Sum_probs=100.1
Q ss_pred ccHHHHHHHHccCChHHH---HHHhhcCCCCcccc----cCcCCCcHHhHHHhc---CcHHHHHHHHHhCCCCchh----
Q 041634 15 INSELYNALMIKKDEQKV---SELCRKVPDHALYV----FTIHDDTVLLMATYT---KKSDLVIKLLDELPDQSLD---- 80 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v---~~lL~~~~~~~~~~----~d~~G~TpLh~Aa~~---G~~eiV~~LL~~~p~~~~~---- 80 (363)
++++||.|+.. |+.+.+ ++.+.+ .+.+++. .|.+|.||||+|+.. |+.++|+.|++.+++ ...
T Consensus 2 G~t~L~~A~~~-g~~~~v~~ll~~l~~-~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~-~~~~~~~ 78 (256)
T 2etb_A 2 DRDRLFSVVSR-GVPEELTGLLEYLRW-NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD-SGNPKPL 78 (256)
T ss_dssp CHHHHHHHHHH-TCGGGGTTHHHHHHH-HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH-TTCSSCG
T ss_pred CccHHHHHHHc-CCHHHHHHHHHHHHH-cCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCc-ccchhhh
Confidence 35899999998 998744 344434 3456666 799999999999999 999999999998766 321
Q ss_pred ---hhhccCCCCCcHHHHHHh-------------chhhccccCC-------------CCcHHHHHHhhCcccCccccCCc
Q 041634 81 ---KMTRQNKAGNTIQHETAT-------------RRLVRKIDYN-------------GNTILHMAGIKIKDYGSEKMEGP 131 (363)
Q Consensus 81 ---~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~-------------GnT~LHlAa~~~~~~~~~~~~~~ 131 (363)
....+|..|+||||+|+. +..++.+|.+ |+||||+|+..|+.+++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v------ 152 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV------ 152 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHH------
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHH------
Confidence 000135789999999998 4567778876 99999999999876543
Q ss_pred hhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 132 ALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 132 al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
+++.. ........+.+|.+|+||++++..
T Consensus 153 ------~~Ll~----~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 153 ------TYLLE----NPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp ------HHHHH----CSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred ------HHHHh----ccccCCCcCccCCCCCCHHHHHHH
Confidence 11111 000112367889999999999875
No 65
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.66 E-value=1.6e-16 Score=139.28 Aligned_cols=110 Identities=16% Similarity=0.035 Sum_probs=92.9
Q ss_pred cccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCC
Q 041634 8 DTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNK 87 (363)
Q Consensus 8 ~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~ 87 (363)
.+......+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||+|+..|+.++++.|++.+++ .. .+|.
T Consensus 61 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~ 132 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKN-NRLGIAEKLLSK--GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VN----DRNL 132 (192)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SS----CCCT
T ss_pred cccccccCccHHHHHHHc-CCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CC----CCCC
Confidence 334445678999999998 887766555554 567888999999999999999999999999999988 54 6899
Q ss_pred CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 88 AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 88 ~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.|+||||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 133 EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 99999999998 456788999999999999999876544
No 66
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=3.6e-16 Score=146.34 Aligned_cols=124 Identities=14% Similarity=-0.074 Sum_probs=92.4
Q ss_pred cccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCC
Q 041634 43 ALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNG 109 (363)
Q Consensus 43 ~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~G 109 (363)
.....|.+|.||||.||..|+.++|+.|++.+++ .. .+|.+|+||||+|+. +..++.+|.+|
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 125 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VN----IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW 125 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SC----EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTC
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 3566889999999999999999999999999988 54 689999999999998 45678899999
Q ss_pred CcHHHHHHhhCcccCcccc------------CCchhhhHHHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHHh
Q 041634 110 NTILHMAGIKIKDYGSEKM------------EGPALLLRDELLWYERVKSVTMA-HFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 110 nT~LHlAa~~~~~~~~~~~------------~~~al~l~~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 171 (363)
+||||+|+..++.++++.+ +.+++.....-...+.++..+.. ...+.+|.+|+||++++...
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 200 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACEN 200 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHT
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999887765322 22344433222222223322221 24577889999999998653
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.66 E-value=6.3e-16 Score=142.91 Aligned_cols=153 Identities=17% Similarity=0.092 Sum_probs=99.9
Q ss_pred cccccHHHHHHHHc--cCChHHHHHHhhcCCC----------CcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCch
Q 041634 12 KLKINSELYNALMI--KKDEQKVSELCRKVPD----------HALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSL 79 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~--~g~~~~v~~lL~~~~~----------~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~ 79 (363)
.....++||+|+.. .|+.+ ++++|++... ......|.+|.||||+|+..|+.++|++|++.+++ ..
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~-~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~ 128 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQND-TIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQ 128 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCH-HHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred CcCCCCHHHHHHHHHhcCChH-HHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cC
Confidence 45678999999962 25666 4455444321 11223567899999999999999999999999998 54
Q ss_pred hhhhccCC--------------CCCcHHHHHHh-----------c-----hhhccccCCCCcHHHHHHhhCcccCccccC
Q 041634 80 DKMTRQNK--------------AGNTIQHETAT-----------R-----RLVRKIDYNGNTILHMAGIKIKDYGSEKME 129 (363)
Q Consensus 80 ~~~~~~d~--------------~G~t~LH~Aa~-----------~-----~lin~~D~~GnT~LHlAa~~~~~~~~~~~~ 129 (363)
.+|. .|+||||+|+. . ..++.+|.+|+||||+|+..++....
T Consensus 129 ----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~---- 200 (273)
T 2pnn_A 129 ----AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD---- 200 (273)
T ss_dssp ----CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH----
T ss_pred ----ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchh----
Confidence 4665 79999999997 2 45678999999999999998863210
Q ss_pred Cch--hhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh-cHHH
Q 041634 130 GPA--LLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA-NNEL 175 (363)
Q Consensus 130 ~~a--l~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~-~~~l 175 (363)
... .++- +++.....+--......+.+|++|+||++++.+. +.++
T Consensus 201 ~~~~~~~~v-~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 201 NTKFVTSMY-NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp HHHHHHHHH-HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHH-HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHH
Confidence 000 0110 1111111110000011246899999999998763 4443
No 68
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.66 E-value=3.2e-16 Score=152.37 Aligned_cols=165 Identities=15% Similarity=0.135 Sum_probs=105.6
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhC---CCCchh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDEL---PDQSLD 80 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~---p~~~~~ 80 (363)
.|.+.+.....++++||+|+.. |+.+.+ ++|++ .+.+++..|.+|.||||.|+..|+.+++++|++.+ .+ ..
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~-g~~~iv-~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~- 229 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLA-RRRRLV-AYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IE- 229 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHH-TCHHHH-HHHHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TS-
T ss_pred cCCCCcCCCCCCCCHHHHHHHc-ChHHHH-HHHHH-CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hh-
Confidence 4566666667788899999987 776644 44444 25667778888888888888888888888888865 34 22
Q ss_pred hhhccCCCCCcHHHHHHh----------------chhhc--------cccCCCCcHHHHHHhhCcccCcccc--------
Q 041634 81 KMTRQNKAGNTIQHETAT----------------RRLVR--------KIDYNGNTILHMAGIKIKDYGSEKM-------- 128 (363)
Q Consensus 81 ~~~~~d~~G~t~LH~Aa~----------------~~lin--------~~D~~GnT~LHlAa~~~~~~~~~~~-------- 128 (363)
.+|..|+||||+|+. +..++ .+|.+|+||||+|+..|+.++++.+
T Consensus 230 ---~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 230 ---ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp ---CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred ---hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 578888888888875 11122 3566888888888887766554211
Q ss_pred ------CCchhhhHHHHHHHHHhhhhccc-cccccCCCCCCCHHHHHHH-hcHHHH
Q 041634 129 ------EGPALLLRDELLWYERVKSVTMA-HFLNHGNNMGFTPEELFAT-ANNELR 176 (363)
Q Consensus 129 ------~~~al~l~~~l~~~~~V~~~~~~-~~~~~~N~~G~Tp~dl~~~-~~~~l~ 176 (363)
+.+++.+...-...+.|+-.+.. ...+.+|++|+||++++.+ .|.++.
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence 22344433222222223222221 1356778888888888765 344433
No 69
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.66 E-value=3.4e-17 Score=151.46 Aligned_cols=151 Identities=17% Similarity=0.113 Sum_probs=102.4
Q ss_pred CCCCccccccccccHHHHHHHHccCChHHHHHHhhcC--CCCccc----ccCcCCCcHHhHHHhc---CcHHHHHHHHHh
Q 041634 3 SIGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKV--PDHALY----VFTIHDDTVLLMATYT---KKSDLVIKLLDE 73 (363)
Q Consensus 3 ~~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~--~~~~~~----~~d~~G~TpLh~Aa~~---G~~eiV~~LL~~ 73 (363)
|.+....+.....+++||.|+.. |+.+.+..++... .+..+. ..|.+|.||||+|+.. |+.++|++|++.
T Consensus 1 S~~a~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ 79 (273)
T 2pnn_A 1 SVSAGEKPPRLYDRRSIFDAVAQ-SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV 79 (273)
T ss_dssp ----------CCCHHHHHHHHHT-TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH
T ss_pred CCcccCCCCCcccchHHHHHHHc-CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh
Confidence 34455566777788999999998 9988777776531 222332 4588999999999987 999999999998
Q ss_pred CCCCch------h-hhhccCCCCCcHHHHHHh-------------chhhccccC--------------CCCcHHHHHHhh
Q 041634 74 LPDQSL------D-KMTRQNKAGNTIQHETAT-------------RRLVRKIDY--------------NGNTILHMAGIK 119 (363)
Q Consensus 74 ~p~~~~------~-~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~--------------~GnT~LHlAa~~ 119 (363)
+++ .. + ....+|..|+||||+|+. +..++.+|. +|+||||+|+..
T Consensus 80 ga~-~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 158 (273)
T 2pnn_A 80 ARK-TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACT 158 (273)
T ss_dssp HHH-TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT
T ss_pred hcc-ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHc
Confidence 653 11 0 000257799999999997 456677776 799999999999
Q ss_pred CcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 120 IKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 120 ~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
|+.+++ +++.. ........+.+|.+|+||++++...
T Consensus 159 g~~~~v------------~~Ll~----~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 159 NQLAIV------------KFLLQ----NSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp TCHHHH------------HHHHH----CSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHH------------HHHHh----cccCCCCceeeCCCCCcHHHHHHHc
Confidence 876543 11111 0001123678899999999998763
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.65 E-value=2.2e-15 Score=138.14 Aligned_cols=106 Identities=22% Similarity=0.045 Sum_probs=76.7
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCc
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t 91 (363)
.....++||+|+.. |+.+.+..++.. +.+.+..|.+|.||||.|+..|+.++++.|++++++ .. .+|..|+|
T Consensus 36 ~~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t 107 (285)
T 1wdy_A 36 EEGGWTPLHNAVQM-SREDIVELLLRH--GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VN----ECDFYGFT 107 (285)
T ss_dssp TTTCCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CBCTTCCB
T ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----ccCcccCC
Confidence 34466788888887 776644444433 556777788888888888888888888888888877 44 57888888
Q ss_pred HHHHHHh-------------chhhccc----------cCCCCcHHHHHHhhCcccCc
Q 041634 92 IQHETAT-------------RRLVRKI----------DYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~----------D~~GnT~LHlAa~~~~~~~~ 125 (363)
|||+|+. +..++.+ |.+|.||||+|+..++.+++
T Consensus 108 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 164 (285)
T 1wdy_A 108 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHH
Confidence 8888886 1222333 67788888888887766554
No 71
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.65 E-value=2.7e-16 Score=127.11 Aligned_cols=103 Identities=23% Similarity=0.093 Sum_probs=89.0
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
++++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+||||
T Consensus 2 g~t~L~~A~~~-~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~~~~~g~t~l~ 73 (126)
T 1n0r_A 2 GRTPLHLAARN-GHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VN----AKDKNGRTPLH 73 (126)
T ss_dssp CCCHHHHHHHH-TCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCHHH
T ss_pred CccHHHHHHHc-CcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-Cc----ccCCCCCcHHH
Confidence 56899999998 998877666665 566788899999999999999999999999999988 44 68999999999
Q ss_pred HHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 95 ETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 95 ~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHH
Confidence 9997 456788999999999999999875543
No 72
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.65 E-value=4.1e-16 Score=142.89 Aligned_cols=99 Identities=22% Similarity=0.179 Sum_probs=85.4
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccC-CCCCc
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNT 91 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d-~~G~t 91 (363)
.+.+++||.|+.. |+.+.+..++. +.+++.+|.+|.||||+|+..|+.++|+.|++++++ .. .+| ..|+|
T Consensus 43 ~~g~t~L~~A~~~-g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETPWWTAARK-ADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LD----HRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCSSSCCC
T ss_pred cCCCCHHHHHHHc-CCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CC----cCCCCCCCC
Confidence 4567999999998 88875555554 567888999999999999999999999999999998 54 456 88999
Q ss_pred HHHHHHh-------------chhhccccCCCCcHHHHHHhhC
Q 041634 92 IQHETAT-------------RRLVRKIDYNGNTILHMAGIKI 120 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~ 120 (363)
|||+|+. +..++.+|.+|+||||+|+..+
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 9999997 5677899999999999999764
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.65 E-value=1.5e-16 Score=144.72 Aligned_cols=106 Identities=14% Similarity=-0.000 Sum_probs=90.2
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCc
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t 91 (363)
.....++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++|++|++.+++ +. .+|..|+|
T Consensus 18 ~~~~~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n----~~d~~g~t 89 (229)
T 2vge_A 18 RLNPLVLLLDAALT-GELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN-VN----SPDSHGWT 89 (229)
T ss_dssp TSCHHHHHHHHHHH-TCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCC
T ss_pred ccchhHHHHHHHHc-CCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----CCCCCCCC
Confidence 34456789999998 998877777755 567888999999999999999999999999999988 54 68999999
Q ss_pred HHHHHHh-------------chhhcccc-CCCCcHHHHH--HhhCcccCc
Q 041634 92 IQHETAT-------------RRLVRKID-YNGNTILHMA--GIKIKDYGS 125 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D-~~GnT~LHlA--a~~~~~~~~ 125 (363)
|||+|+. +..++.+| .+|+||||+| +..++.+++
T Consensus 90 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v 139 (229)
T 2vge_A 90 PLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCA 139 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHH
Confidence 9999998 45667776 5999999999 888876655
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.64 E-value=1.3e-16 Score=138.35 Aligned_cols=111 Identities=23% Similarity=0.133 Sum_probs=92.8
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
+.+.+......+++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~ 100 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACRE-GRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-IN----A 100 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----C
T ss_pred cccccccCCCCCCHHHHHHHc-CcHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----c
Confidence 344455566688999999998 887755554443 677888999999999999999999999999999988 54 6
Q ss_pred cCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCccc
Q 041634 85 QNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDY 123 (363)
Q Consensus 85 ~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~ 123 (363)
+|..|+||||+|+. +..++.+|.+|+||||+|+..++..
T Consensus 101 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 152 (179)
T 3f6q_A 101 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLREL 152 (179)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHH
Confidence 89999999999997 5667889999999999999887543
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.64 E-value=2.9e-16 Score=133.28 Aligned_cols=113 Identities=13% Similarity=-0.006 Sum_probs=92.2
Q ss_pred CCCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 4 IGIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 4 ~~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
.|.+.+......+++||.|+. |+.+ ++++|.+. +.+++.+|.+|.||||.|++.|+.++++.|++.+++ ..
T Consensus 27 ~~~~~~~~~~~g~t~L~~A~~--~~~~-~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~---- 97 (162)
T 1ihb_A 27 NNVNVNAQNGFGRTALQVMKL--GNPE-IARRLLLR-GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VN---- 97 (162)
T ss_dssp SCCCTTCCCTTSCCHHHHCCS--SCHH-HHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----
T ss_pred CCCCccccCccCccHHHHHHc--CcHH-HHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----
Confidence 455555566678899999884 6666 44555552 677888999999999999999999999999999988 44
Q ss_pred ccCCCCCcHHHHHHh-------------ch-hhccccCCCCcHHHHHHhhCcccCc
Q 041634 84 RQNKAGNTIQHETAT-------------RR-LVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~-------------~~-lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|..|+||||+|+. +. .++.+|.+|+||||+|++.++.+++
T Consensus 98 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 98 IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 689999999999998 22 2588999999999999999876544
No 76
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.64 E-value=1.2e-15 Score=139.94 Aligned_cols=104 Identities=23% Similarity=0.104 Sum_probs=88.0
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCccccc-CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVF-TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~-d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
+.+++||.|+.. |+.+.+..++.. +.+++.. +..|.||||.|++.|+.+++++|++.+++ .. .+|..|+||
T Consensus 4 ~g~~~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~ 75 (285)
T 1wdy_A 4 EDNHLLIKAVQN-EDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PV----LRKKNGATP 75 (285)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCCH
T ss_pred ccchHHHHHHHc-CCHHHHHHHHHc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-Cc----ccCCCCCCH
Confidence 457899999998 998877766665 3455555 78899999999999999999999999988 44 689999999
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 121 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH
Confidence 999997 455788999999999999999876554
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.63 E-value=5.4e-16 Score=141.97 Aligned_cols=105 Identities=21% Similarity=0.151 Sum_probs=87.1
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccC--------------cCCCcHHhHHHhcCcHHHHHHHHH---hCC
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFT--------------IHDDTVLLMATYTKKSDLVIKLLD---ELP 75 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d--------------~~G~TpLh~Aa~~G~~eiV~~LL~---~~p 75 (363)
....++||+|+.. |+.+.+ ++|++ .+.+++..| .+|.||||+|+..|+.++|++|++ .+.
T Consensus 91 ~~g~t~L~~A~~~-g~~~~v-~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 167 (260)
T 3jxi_A 91 YRGQTALHIAIER-RCKHYV-ELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA 167 (260)
T ss_dssp EESBCHHHHHHHT-TCHHHH-HHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred cCCCCHHHHHHHc-CCHHHH-HHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 3678999999998 887755 55555 356777777 589999999999999999999999 777
Q ss_pred CCchhhhhccCCCCCcHHHHHHh----------------------chhh-------ccccCCCCcHHHHHHhhCcccCc
Q 041634 76 DQSLDKMTRQNKAGNTIQHETAT----------------------RRLV-------RKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 76 ~~~~~~~~~~d~~G~t~LH~Aa~----------------------~~li-------n~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+ .. .+|..|+||||+|+. +..+ +.+|.+|+||||+|++.|+.+++
T Consensus 168 ~-~~----~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 168 D-LR----RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp C-TT----CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred C-Cc----ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHH
Confidence 7 44 689999999999993 2334 67999999999999999987655
No 78
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.63 E-value=2.1e-16 Score=131.08 Aligned_cols=101 Identities=24% Similarity=0.193 Sum_probs=82.8
Q ss_pred ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcH
Q 041634 46 VFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTI 112 (363)
Q Consensus 46 ~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~ 112 (363)
.+|.+|.||||.|+..|+.+++++|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PN----VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SC----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5688999999999999999999999999988 44 689999999999997 45678899999999
Q ss_pred HHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 113 LHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 113 LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
||+|++.++.+++ +++..... ..+.+|.+|+||.+++..
T Consensus 80 L~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 80 LHDAAKNGHVDIV------------KLLLSYGA-------SRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHTTCHHHH------------HHHHHTTC-------CTTCCCTTSCCGGGGCCC
T ss_pred HHHHHHcCCHHHH------------HHHHHcCC-------CCCCCCCCCCCHHHHHhh
Confidence 9999999876543 11111111 257889999999998754
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.63 E-value=1.8e-16 Score=144.52 Aligned_cols=127 Identities=18% Similarity=0.054 Sum_probs=75.2
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
.+.++||.|+.. ++.+.+..++.. +.+++. +..|.||||.|+..|+.++|+.|++.+++ .. .+|..|+|||
T Consensus 4 ~g~t~L~~a~~~-~~~~~~~~ll~~--g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~d~~g~t~L 74 (239)
T 1ycs_B 4 TGQVSLPPGKRT-NLRKTGSERIAH--GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PS----LPNDEGITAL 74 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CC----CCCTTSCCHH
T ss_pred cccccCchhhhh-hhHHHHHHHhcc--CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCCCCCHH
Confidence 356899999987 877766666654 344443 46789999999999999999999999887 54 6899999999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..+|.+|.+|+||||+|+..++.+++ +++..... ..+.+|++
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~ 135 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC------------KFLVESGA-------AVFAMTYS 135 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH------------HHHHHTTC-------CTTCCCSS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH------------HHHHHcCC-------CcceecCC
Confidence 99997 567789999999999999999876544 12211111 24566766
Q ss_pred CC-CHHHHH
Q 041634 161 GF-TPEELF 168 (363)
Q Consensus 161 G~-Tp~dl~ 168 (363)
|. ||++++
T Consensus 136 ~~~t~l~~a 144 (239)
T 1ycs_B 136 DMQTAADKC 144 (239)
T ss_dssp SCCCHHHHC
T ss_pred CCcchHHHH
Confidence 65 999987
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.63 E-value=7.5e-16 Score=140.34 Aligned_cols=104 Identities=14% Similarity=-0.032 Sum_probs=87.6
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
...++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++|++|++++++ +. .+|..|+|||
T Consensus 36 ~~~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~d~~g~tpL 107 (239)
T 1ycs_B 36 LPLALLLDSSLE-GEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VN----AADSDGWTPL 107 (239)
T ss_dssp -CHHHHHHHHHH-TCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TT----CCCTTCCCHH
T ss_pred hhhHHHHHHHHc-CCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----ccCCCCCCHH
Confidence 346899999998 998866666544 457889999999999999999999999999999988 54 6899999999
Q ss_pred HHHHh-------------chhhccccCCCC-cHHHHH--HhhCcccCc
Q 041634 94 HETAT-------------RRLVRKIDYNGN-TILHMA--GIKIKDYGS 125 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~Gn-T~LHlA--a~~~~~~~~ 125 (363)
|+|+. +..++.+|.+|. ||||+| +..|+.+++
T Consensus 108 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 108 HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHH
Confidence 99997 566788888887 999999 667766654
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.62 E-value=1.4e-16 Score=140.84 Aligned_cols=106 Identities=15% Similarity=0.056 Sum_probs=90.8
Q ss_pred ccccHHHHHHHHccCChH---HHHHHhhcCCCCcccccCcCCCcHHhHHHhcCc------HHHHHHHHHhCCCCchhhhh
Q 041634 13 LKINSELYNALMIKKDEQ---KVSELCRKVPDHALYVFTIHDDTVLLMATYTKK------SDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~---~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~------~eiV~~LL~~~p~~~~~~~~ 83 (363)
..+.++||+|+.. |+.+ +++++|++ .+.+++.+|.+|+||||+|+..|+ .++++.|++++++ +.
T Consensus 36 ~~g~T~Lh~A~~~-~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in---- 108 (186)
T 3t8k_A 36 VLKSNILYDVLRN-NNDEARYKISMFLIN-KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-IT---- 108 (186)
T ss_dssp HHTTTHHHHHTTC-SCHHHHHHHHHHHHH-TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SS----
T ss_pred cCCCCHHHHHHHc-CCcchHHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CC----
Confidence 4578999999987 7654 47777777 578899999999999999999997 6899999999999 55
Q ss_pred ccCCCCC-cHHHHHHh-------------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 84 RQNKAGN-TIQHETAT-------------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 84 ~~d~~G~-t~LH~Aa~-------------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|..|+ ||||+|+. +..++.+|.+|+||||+|++.++..++
T Consensus 109 ~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 6899999 99999986 345788999999999999999876544
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.62 E-value=1.9e-15 Score=135.33 Aligned_cols=131 Identities=16% Similarity=0.023 Sum_probs=103.1
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQ 93 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~L 93 (363)
...++||.|+.. |+.+.+..++.. +.+++..|.+|.||||.|++.|+.++++.|++.+++ ... ..+..|+|||
T Consensus 8 ~~~~~l~~A~~~-g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~---~~~~~~~t~L 80 (240)
T 3eu9_A 8 YSTWDIVKATQY-GIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAI-VDQ---LGGDLNSTPL 80 (240)
T ss_dssp GGGCCHHHHHHT-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTC---CBTTTTBCHH
T ss_pred ccchHHHHHHHc-CChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCc-chh---hcCCcCCChh
Confidence 345689999998 998877666654 567888899999999999999999999999999998 554 5667799999
Q ss_pred HHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCC
Q 041634 94 HETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNM 160 (363)
Q Consensus 94 H~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~ 160 (363)
|+|+. +..++.+|.+|.||||+|+..++.++++ ...... ...+..|.+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~------------~Ll~~~-------~~~~~~~~~ 141 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVA------------YLIAKG-------QDVDMMDQN 141 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH------------HHHHTT-------CCTTCCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHH------------HHHhcC-------CCccccCCC
Confidence 99998 4566788999999999999998765431 111111 124577888
Q ss_pred CCCHHHHHHH
Q 041634 161 GFTPEELFAT 170 (363)
Q Consensus 161 G~Tp~dl~~~ 170 (363)
|.||...+..
T Consensus 142 g~t~l~~a~~ 151 (240)
T 3eu9_A 142 GMTPLMWAAY 151 (240)
T ss_dssp SCCHHHHHHH
T ss_pred CCcHHHHHHH
Confidence 8898888763
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.62 E-value=4.5e-16 Score=129.22 Aligned_cols=107 Identities=16% Similarity=0.010 Sum_probs=86.8
Q ss_pred CCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh------------chhhccccCC
Q 041634 41 DHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT------------RRLVRKIDYN 108 (363)
Q Consensus 41 ~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~------------~~lin~~D~~ 108 (363)
+.+++..|.+|.||||.|++.|+.+++++|++.+++ .. .+|..|+||||+|+. +..++.+|.+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PN----ALNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPA 76 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCTTTTTSTTSCHHHHHHHHHHTCCSSCCBTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cC----CcCCCCCCHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 346778899999999999999999999999999988 44 689999999999985 4567889999
Q ss_pred -CCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 109 -GNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 109 -GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
|+||||+|+..++.+++ +++.... ...+.+|.+|+||++++...
T Consensus 77 ~g~t~L~~A~~~~~~~~v------------~~Ll~~g-------a~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTL------------VVLHRAG-------ARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TTBCHHHHHHHHTCHHHH------------HHHHHTC-------CCCCCCSSSSSCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHH------------HHHHHcC-------CCCCccCCCCCCHHHHHHHc
Confidence 99999999999876543 1111111 12578899999999998764
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.61 E-value=1.1e-15 Score=148.44 Aligned_cols=127 Identities=20% Similarity=0.188 Sum_probs=94.2
Q ss_pred CCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------c---hhhc
Q 041634 40 PDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------R---RLVR 103 (363)
Q Consensus 40 ~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~---~lin 103 (363)
.+.+++..|.+|.||||+|+..|+.++|++|++.+++ .. .+|..|+||||+|+. + ..++
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 229 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PT----IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE 229 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SC----CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS
T ss_pred cCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-Cc----ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh
Confidence 3677889999999999999999999999999999988 54 689999999999997 1 4678
Q ss_pred cccCCCCcHHHHHHhhC---cccCccc---------------------cCCchhhhHHHHHHHHHhhhhcc--ccccccC
Q 041634 104 KIDYNGNTILHMAGIKI---KDYGSEK---------------------MEGPALLLRDELLWYERVKSVTM--AHFLNHG 157 (363)
Q Consensus 104 ~~D~~GnT~LHlAa~~~---~~~~~~~---------------------~~~~al~l~~~l~~~~~V~~~~~--~~~~~~~ 157 (363)
.+|.+|+||||+|+..+ +.++++. -+.+++.........+.|+..+. ....+.+
T Consensus 230 ~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~ 309 (373)
T 2fo1_E 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ 309 (373)
T ss_dssp CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCC
T ss_pred hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCc
Confidence 89999999999999887 3333211 12234443322222233333332 1346788
Q ss_pred CCCCCCHHHHHHHh
Q 041634 158 NNMGFTPEELFATA 171 (363)
Q Consensus 158 N~~G~Tp~dl~~~~ 171 (363)
|.+|.||++++...
T Consensus 310 d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 310 DEDGKTPIMLAAQE 323 (373)
T ss_dssp CTTCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHc
Confidence 99999999998753
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.61 E-value=3.1e-16 Score=146.36 Aligned_cols=131 Identities=19% Similarity=0.105 Sum_probs=102.1
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHH
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHET 96 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~A 96 (363)
+++|.|+.. |+.+.+..++....+..++.+|.+|.||||+|+..|+.++|+.|++.+++ ..+ .+|..|+||||+|
T Consensus 78 ~~l~~a~~~-~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~-~~~---~~~~~g~tpL~~a 152 (276)
T 4hbd_A 78 SDAHPELVR-RHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC-KVD---KQNRAGYSPIMLT 152 (276)
T ss_dssp TTCCHHHHH-HHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC-CTT---CCCTTSCCHHHHG
T ss_pred cCCCHHHHH-HHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-cCC---CCCCCCCCHHHHH
Confidence 456777777 77777777766544445778899999999999999999999999999984 244 7899999999999
Q ss_pred Hh------------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCC
Q 041634 97 AT------------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGN 158 (363)
Q Consensus 97 a~------------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N 158 (363)
+. +...+..|.+|+||||+|+..|+.+++ +++....+ ..+.+|
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v------------~~Ll~~ga-------d~n~~d 213 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVV------------KALLACEA-------DVNVQD 213 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHH------------HHHHHTTC-------CTTCCC
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH------------HHHHhCCC-------CCCCCC
Confidence 93 445677899999999999999976544 11111111 257889
Q ss_pred CCCCCHHHHHHHh
Q 041634 159 NMGFTPEELFATA 171 (363)
Q Consensus 159 ~~G~Tp~dl~~~~ 171 (363)
.+|.||++++...
T Consensus 214 ~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 214 DDGSTALMCACEH 226 (276)
T ss_dssp TTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHC
Confidence 9999999998653
No 86
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.61 E-value=5e-16 Score=139.37 Aligned_cols=105 Identities=18% Similarity=0.051 Sum_probs=89.8
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHh-CCCCchhhhhccCCCCCc
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDE-LPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~-~p~~~~~~~~~~d~~G~t 91 (363)
..++++||.|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++|+.|++. +.+ +. .+|..|+|
T Consensus 71 ~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~----~~d~~g~t 142 (222)
T 3ehr_A 71 ESIDNPLHEAAKR-GNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LN----QQNKLGDT 142 (222)
T ss_dssp EEESCHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CC----CCCTTSCC
T ss_pred ccccccccccccc-CcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-cc----ccCCCCCC
Confidence 3457899999998 998866666654 567888999999999999999999999999998 666 44 68999999
Q ss_pred HHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 92 IQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l 189 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLL 189 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHH
Confidence 9999998 566789999999999999998765544
No 87
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.61 E-value=1.8e-16 Score=144.24 Aligned_cols=114 Identities=13% Similarity=-0.015 Sum_probs=92.1
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR 84 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~ 84 (363)
|.+.+.....++++||+|+.. |+.+.+. +|++ .+.+++.+|.+|.||||+|+..|+.++++.|++.+++ ... .
T Consensus 44 g~~~~~~d~~g~tpLh~A~~~-g~~~~v~-~Ll~-~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~---~ 116 (229)
T 2vge_A 44 MNDPSQPNEEGITALHNAICG-ANYSIVD-FLIT-AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA-IFA---T 116 (229)
T ss_dssp SSCTTCCCTTSCCHHHHHHHT-TCHHHHH-HHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTC---C
T ss_pred CCCCCCCCCCCCCHHHHHHHc-CCHHHHH-HHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccc---c
Confidence 344555566788999999998 8877554 5555 2678889999999999999999999999999999998 553 3
Q ss_pred cCCCCCcHHHHH--Hh-------------------------------------------ch--hhccccCCCCcHHHHHH
Q 041634 85 QNKAGNTIQHET--AT-------------------------------------------RR--LVRKIDYNGNTILHMAG 117 (363)
Q Consensus 85 ~d~~G~t~LH~A--a~-------------------------------------------~~--lin~~D~~GnT~LHlAa 117 (363)
.|..|+||||+| +. +. .++.+|.+|+||||+|+
T Consensus 117 ~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~ 196 (229)
T 2vge_A 117 TLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAA 196 (229)
T ss_dssp CSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEE
T ss_pred cCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHH
Confidence 347999999999 54 11 25778999999999999
Q ss_pred hhCcccCc
Q 041634 118 IKIKDYGS 125 (363)
Q Consensus 118 ~~~~~~~~ 125 (363)
+.|+.+++
T Consensus 197 ~~g~~~~v 204 (229)
T 2vge_A 197 LHGQEGYV 204 (229)
T ss_dssp ETTEEEEE
T ss_pred HcCCccee
Confidence 99988776
No 88
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.61 E-value=6.6e-16 Score=125.83 Aligned_cols=98 Identities=18% Similarity=-0.013 Sum_probs=78.5
Q ss_pred CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHH
Q 041634 48 TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILH 114 (363)
Q Consensus 48 d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LH 114 (363)
+..|.||||.|++.|+.++++.|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VN----RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TT----SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cC----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 45689999999999999999999999988 54 689999999999998 4567889999999999
Q ss_pred HHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHH
Q 041634 115 MAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFA 169 (363)
Q Consensus 115 lAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~ 169 (363)
+|+..++.+++ +++....+ ..+.+|++|+||++++.
T Consensus 79 ~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 79 SAVYEGHVSCV------------KLLLSKGA-------DKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHTCHHHH------------HHHHHTTC-------CTTCCCTTSCCHHHHCC
T ss_pred HHHHcCCHHHH------------HHHHHcCC-------CCCCcCCCCCCHHHHhC
Confidence 99999876543 11111111 25788999999999873
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.60 E-value=3.8e-15 Score=141.81 Aligned_cols=142 Identities=16% Similarity=0.020 Sum_probs=102.2
Q ss_pred CccccccccccHHHHHHHHccCChHHHHHHhhcCCCCc--------ccccCcCCCcHHhHHHhcCcHHHHHHHHHh-CCC
Q 041634 6 IEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHA--------LYVFTIHDDTVLLMATYTKKSDLVIKLLDE-LPD 76 (363)
Q Consensus 6 ~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~--------~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~-~p~ 76 (363)
.+.+.....+.++||+|+.. |+.+.+..++......+ ....+.+|.||||+|++.|+.++|++||++ +.+
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~-~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad 194 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVY-GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHT-TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC
T ss_pred chhhhhccCCCCHHHHHHHc-CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC
Confidence 34444556678899999998 88776655554422111 223466799999999999999999999975 555
Q ss_pred CchhhhhccCCCCCcHHHHHHh-----------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHH
Q 041634 77 QSLDKMTRQNKAGNTIQHETAT-----------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDEL 139 (363)
Q Consensus 77 ~~~~~~~~~d~~G~t~LH~Aa~-----------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l 139 (363)
+. .+|..|+|+||.++. +..+|.+|.+|+||||+|+..++.+.++ .|
T Consensus 195 -~n----~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~-----------~L 258 (337)
T 4g8k_A 195 -VN----ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ-----------RL 258 (337)
T ss_dssp -TT----CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH-----------HH
T ss_pred -cC----ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH-----------HH
Confidence 33 689999999998775 3467889999999999999998754331 11
Q ss_pred HHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 140 LWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 140 ~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
.-. ....++.+|++|+||++++.+.
T Consensus 259 l~~-------~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 259 LEQ-------EHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HTS-------TTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHh-------cCCcccCcCCCCCCHHHHHHHc
Confidence 100 1123678899999999998763
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.59 E-value=3e-15 Score=142.97 Aligned_cols=99 Identities=18% Similarity=0.097 Sum_probs=80.3
Q ss_pred HHHHHHccCChHHHHHHhhcCCCCcccc-cCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHH
Q 041634 19 LYNALMIKKDEQKVSELCRKVPDHALYV-FTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETA 97 (363)
Q Consensus 19 Lh~A~~~~g~~~~v~~lL~~~~~~~~~~-~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa 97 (363)
+|.|+. +...++++++.+ .+.+++. .|.+|.||||+||+.|+.++|++||+++++ +. .+|.+|+||||+|+
T Consensus 101 ~~~a~~--~~~~~~~~~l~~-~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n----~~d~~g~TpLh~A~ 172 (327)
T 1sw6_A 101 QHVSFD--SLLQEVNDAFPN-TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RL----YGDNMGESCLVKAV 172 (327)
T ss_dssp ---CHH--HHHHHHHHHCTT-SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----BCCTTCCCHHHHHH
T ss_pred hHHHHH--hhHHHHHHHHHh-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCCCCCHHHHHH
Confidence 355553 455678888776 4677888 899999999999999999999999999998 54 68999999999999
Q ss_pred hc-----------------hhhccccCCCCcHHHHHHh----hCcccCc
Q 041634 98 TR-----------------RLVRKIDYNGNTILHMAGI----KIKDYGS 125 (363)
Q Consensus 98 ~~-----------------~lin~~D~~GnT~LHlAa~----~~~~~~~ 125 (363)
.. ..++.+|.+|+||||+|++ .++.+++
T Consensus 173 ~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v 221 (327)
T 1sw6_A 173 KSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA 221 (327)
T ss_dssp HSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHH
T ss_pred HhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHH
Confidence 71 4578899999999999998 5555444
No 91
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.59 E-value=5.4e-15 Score=140.76 Aligned_cols=104 Identities=23% Similarity=0.103 Sum_probs=88.8
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCCcccccCc-CCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDHALYVFTI-HDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~-~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
+.+++||.|+.. |+.+.|..||.. +.+++.+|. .|.||||+||+.|+.++|++||+++++ .. .+|..|.++
T Consensus 24 ~~~t~L~~Av~~-g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~----~~~~~~~~~ 95 (337)
T 4g8k_A 24 EDNHLLIKAVQN-EDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PV----LRKKNGATP 95 (337)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTCCCH
T ss_pred CCChHHHHHHHc-CCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hh----hhccCCCch
Confidence 367899999998 998866666654 567777765 499999999999999999999999988 44 689999999
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|.++. ...++.+|.+|+||||+|+..++.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~ 141 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 141 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHH
T ss_pred hHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHH
Confidence 999997 456789999999999999999876544
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.58 E-value=2.9e-15 Score=142.06 Aligned_cols=102 Identities=23% Similarity=0.186 Sum_probs=87.8
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCcccc------cCcCCCcHHhHHHhc---CcHHHHHHHHHhCCCCchhhhhccC
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHALYV------FTIHDDTVLLMATYT---KKSDLVIKLLDELPDQSLDKMTRQN 86 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~------~d~~G~TpLh~Aa~~---G~~eiV~~LL~~~p~~~~~~~~~~d 86 (363)
.++||.|+.. |+.+.+..++.. +.+++. .|.+|.||||+|+.. |+.+++++|++.+++ +. .+|
T Consensus 152 ~~~L~~A~~~-g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn----~~d 223 (301)
T 2b0o_E 152 PQRLWTAICN-RDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LD----AKA 223 (301)
T ss_dssp HHHHHHHHHT-TCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TT----CCC
T ss_pred HHHHhhhhhc-cCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CC----CCC
Confidence 4679999998 999988888755 444554 588999999999997 999999999999998 54 689
Q ss_pred CCCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 87 KAGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 87 ~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|+||||+|+. +..++.+|.+|+||||+|+..++.+++
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv 275 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 275 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 999999999997 567789999999999999999876543
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.58 E-value=2.9e-15 Score=124.34 Aligned_cols=101 Identities=21% Similarity=0.080 Sum_probs=80.8
Q ss_pred cCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHH
Q 041634 47 FTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTIL 113 (363)
Q Consensus 47 ~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~L 113 (363)
....|.||||.|++.|+.++++.|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+|||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 84 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-VN----AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPL 84 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-CC----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 455689999999999999999999999988 54 689999999999997 456788999999999
Q ss_pred HHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 114 HMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 114 HlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
|+|+..++.+++ +++....+ ..+.+|.+|+||++++...
T Consensus 85 ~~A~~~~~~~~v------------~~Ll~~g~-------~~~~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 85 HLAAFIGHLEIA------------EVLLKHGA-------DVNAQDKFGKTAFDISIGN 123 (136)
T ss_dssp HHHHHHTCHHHH------------HHHHHTTC-------CTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHH------------HHHHHcCC-------CCcCcCCCCCCHHHHHHHC
Confidence 999999876543 11111111 2567899999999998763
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.57 E-value=4e-15 Score=139.46 Aligned_cols=104 Identities=18% Similarity=0.101 Sum_probs=88.9
Q ss_pred cHHHHHHHHccCChHHHHHHhhcCCCCc----ccccCcCCCcHHhHHHhc---CcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 16 NSELYNALMIKKDEQKVSELCRKVPDHA----LYVFTIHDDTVLLMATYT---KKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 16 n~~Lh~A~~~~g~~~~v~~lL~~~~~~~----~~~~d~~G~TpLh~Aa~~---G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
..+|+.|+.. ||.+.+..++....+.. ++..|.+|.||||+|+.. |+.+++++|++++++ +. .+|..
T Consensus 131 l~~l~~a~~~-~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in----~~d~~ 204 (278)
T 1dcq_A 131 LHSLCEAVKT-RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LD----KQTGK 204 (278)
T ss_dssp HHHHHHHHHT-TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TT----CCCTT
T ss_pred hhhhhhHhhh-cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-cc----ccCCC
Confidence 3689999998 99998888877643322 445688999999999999 999999999999998 55 68999
Q ss_pred CCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 89 GNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 89 G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
|+||||+|+. +..++.+|.+|+||||+|+..|+.+++
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHH
Confidence 9999999998 567899999999999999999986554
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.57 E-value=5.1e-15 Score=144.60 Aligned_cols=133 Identities=15% Similarity=0.062 Sum_probs=88.4
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccC--cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFT--IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d--~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
.+++||.|+...|+.+.+..++.. +.+++..| .+|.||||+|+..|+.++|++|++.+++ +. .+|..|+||
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn----~~d~~G~Tp 271 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VN----QADSAGRGP 271 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTSCCH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CC----CCCCCCCCH
Confidence 446999999642666666666544 56677777 8899999999999999999999999988 54 689999999
Q ss_pred HHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCC
Q 041634 93 QHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNN 159 (363)
Q Consensus 93 LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~ 159 (363)
||+|+. +..++.+|.+|+||||+|+..++.++++ ++.....+ .......+.
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~------------lLl~~~~~----~~~~~~~~~ 335 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVT------------LLRLAKMR----EAEAAQGQA 335 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH------------HHHHHHC--------------
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHH------------HHHHcCCC----cccccccCC
Confidence 999997 5678899999999999999999865541 11111111 111234567
Q ss_pred CCCCHHHHHHH
Q 041634 160 MGFTPEELFAT 170 (363)
Q Consensus 160 ~G~Tp~dl~~~ 170 (363)
.+.|+.+++..
T Consensus 336 ~~~t~l~i~~~ 346 (368)
T 3jue_A 336 GDETYLDIFRD 346 (368)
T ss_dssp -----------
T ss_pred CCCCHHHHHHH
Confidence 78899888765
No 96
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.56 E-value=1.2e-14 Score=117.37 Aligned_cols=98 Identities=29% Similarity=0.208 Sum_probs=79.3
Q ss_pred CCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHHHH
Q 041634 50 HDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILHMA 116 (363)
Q Consensus 50 ~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlA 116 (363)
+|+||||.|++.|+.+++++|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VN----AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TT----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CC----CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHH
Confidence 589999999999999999999999988 44 689999999999997 455688999999999999
Q ss_pred HhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 117 GIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 117 a~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
++.++.+++ ++..... ...+.+|.+|+||.+++...
T Consensus 76 ~~~~~~~~~------------~~Ll~~g-------~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 76 ARNGHLEVV------------KLLLEAG-------ADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHTTCHHHH------------HHHHHTT-------CCTTCCCTTSCCHHHHHHHT
T ss_pred HHcChHHHH------------HHHHHcC-------CCCcccCCCCCCHHHHHHHc
Confidence 999875443 1111111 12567899999999998763
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.54 E-value=4e-15 Score=115.36 Aligned_cols=81 Identities=22% Similarity=0.086 Sum_probs=54.9
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQH 94 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH 94 (363)
++++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.++++.|++.+++ .
T Consensus 2 g~t~L~~A~~~-~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~---------------- 61 (93)
T 1n0q_A 2 GRTPLHLAARN-GHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V---------------- 61 (93)
T ss_dssp -CCHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T----------------
T ss_pred CCcHHHHHHHc-CCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C----------------
Confidence 45678888876 776644444433 556777777888888888888888888888887776 2
Q ss_pred HHHhchhhccccCCCCcHHHHHHhhCccc
Q 041634 95 ETATRRLVRKIDYNGNTILHMAGIKIKDY 123 (363)
Q Consensus 95 ~Aa~~~lin~~D~~GnT~LHlAa~~~~~~ 123 (363)
+.+|.+|+||||+|++.++.+
T Consensus 62 --------~~~d~~g~t~l~~A~~~~~~~ 82 (93)
T 1n0q_A 62 --------NAKDKNGRTPLHLAARNGHLE 82 (93)
T ss_dssp --------TCCCTTSCCHHHHHHHTTCHH
T ss_pred --------CccCCCCCCHHHHHHHcCCHH
Confidence 345566666666676666543
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.54 E-value=7.9e-15 Score=137.28 Aligned_cols=76 Identities=17% Similarity=0.039 Sum_probs=42.8
Q ss_pred ccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC-CcHH
Q 041634 15 INSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG-NTIQ 93 (363)
Q Consensus 15 ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G-~t~L 93 (363)
..++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.+++++|++++++ .. .+|..| +|||
T Consensus 62 g~t~L~~A~~~-g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~----~~~~~g~~t~L 133 (285)
T 3kea_A 62 NEFPLHQAATL-EDTKIVKILLFS--GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LM----FYGKTGWKTSF 133 (285)
T ss_dssp TCCHHHHHTTS-SSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GG----GCSSSGGGSHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CC----ccCCCCCCCHH
Confidence 45566666655 555533333322 444555566666666666666666666666666555 33 355555 5666
Q ss_pred HHHHh
Q 041634 94 HETAT 98 (363)
Q Consensus 94 H~Aa~ 98 (363)
|+|+.
T Consensus 134 ~~A~~ 138 (285)
T 3kea_A 134 YHAVM 138 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.53 E-value=1.1e-14 Score=147.07 Aligned_cols=101 Identities=23% Similarity=0.185 Sum_probs=88.4
Q ss_pred HHHHHHHHccCChHHHHHHhhcCCCCccccc------CcCCCcHHhHHHh---cCcHHHHHHHHHhCCCCchhhhhccCC
Q 041634 17 SELYNALMIKKDEQKVSELCRKVPDHALYVF------TIHDDTVLLMATY---TKKSDLVIKLLDELPDQSLDKMTRQNK 87 (363)
Q Consensus 17 ~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~------d~~G~TpLh~Aa~---~G~~eiV~~LL~~~p~~~~~~~~~~d~ 87 (363)
+.||.|+.. |+.+.+..++.. +.+++.. |.+|.||||+|+. .|+.++|++||+.+++ +. .+|.
T Consensus 134 ~~L~~A~~~-g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn----~~d~ 205 (497)
T 3lvq_E 134 QRLWTAICN-RDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LD----AKAA 205 (497)
T ss_dssp HHHHHHHHH-TCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TT----CCCS
T ss_pred HHHHHHHhc-cCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CC----ccCC
Confidence 679999998 999988888876 4555554 8899999999965 9999999999999998 55 6899
Q ss_pred CCCcHHHHHHh-------------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 88 AGNTIQHETAT-------------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 88 ~G~t~LH~Aa~-------------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+|+||||+|+. ++.++.+|.+|+||||+|+..|+.+++
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~ 256 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 256 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 99999999997 677899999999999999999987655
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.53 E-value=5e-15 Score=132.78 Aligned_cols=101 Identities=18% Similarity=-0.005 Sum_probs=82.1
Q ss_pred ccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh--------------chhhccccCCCCc
Q 041634 46 VFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT--------------RRLVRKIDYNGNT 111 (363)
Q Consensus 46 ~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~--------------~~lin~~D~~GnT 111 (363)
..|.+|.||||.||..|+.++|+.|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+|
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~t 142 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VN----GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT 142 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCC
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCC-cc----ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCC
Confidence 3466789999999999999999999999988 44 689999999999998 3456789999999
Q ss_pred HHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHH
Q 041634 112 ILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFAT 170 (363)
Q Consensus 112 ~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~ 170 (363)
|||+|+..|+.+++ +++....+ ..+.+|.+|+||++++..
T Consensus 143 pL~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 143 ALHAAAWKGYADIV------------QLLLAKGA-------RTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp HHHHHHHHTCHHHH------------HHHHHHTC-------CSCCCCTTSCCHHHHCCS
T ss_pred HHHHHHHcCCHHHH------------HHHHHcCC-------CCccccCCCCCHHHHhcc
Confidence 99999999976544 12222222 257889999999999754
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.52 E-value=8.8e-15 Score=138.77 Aligned_cols=104 Identities=15% Similarity=0.009 Sum_probs=79.1
Q ss_pred cccccHHHHHHHHc--cCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 12 KLKINSELYNALMI--KKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~--~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
....+++||+|+.. .|+. +++++|++. +.+++.+|.+|.||||+|+..|+.++|++|++.+++ .. .+|.+|
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~-~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~----~~d~~G 259 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASL-PLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VG----TVNEAG 259 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTH-HHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CS----CCCTTS
T ss_pred CCCCccHHHHHHHhcccCcH-HHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCCC
Confidence 45677899999974 1344 466666653 678889999999999999999999999999999998 44 689999
Q ss_pred CcHHHHHHh-------chhhccccCCCCcHHHHHHhhCcc
Q 041634 90 NTIQHETAT-------RRLVRKIDYNGNTILHMAGIKIKD 122 (363)
Q Consensus 90 ~t~LH~Aa~-------~~lin~~D~~GnT~LHlAa~~~~~ 122 (363)
+||||+|+. ..++......|+||||+|++.|+.
T Consensus 260 ~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 260 ETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCCCChhHHHHhcCCc
Confidence 999999998 345555666899999999998864
No 102
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.51 E-value=1e-14 Score=123.85 Aligned_cols=103 Identities=16% Similarity=-0.047 Sum_probs=80.8
Q ss_pred cccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh------------chhhccccCCCCc-
Q 041634 45 YVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT------------RRLVRKIDYNGNT- 111 (363)
Q Consensus 45 ~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~------------~~lin~~D~~GnT- 111 (363)
...+..|.||||.|++.|+.++|+.|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~----~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~tt 80 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN-PN----APNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTR 80 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TT----CCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC-CC----CCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 34577899999999999999999999999888 44 689999999999865 4567899999999
Q ss_pred HHHHHHhhCcccCccccCCchhhhHHHHHHHHHhhhhccccccccCCCCCCCHHHHHHHh
Q 041634 112 ILHMAGIKIKDYGSEKMEGPALLLRDELLWYERVKSVTMAHFLNHGNNMGFTPEELFATA 171 (363)
Q Consensus 112 ~LHlAa~~~~~~~~~~~~~~al~l~~~l~~~~~V~~~~~~~~~~~~N~~G~Tp~dl~~~~ 171 (363)
|||+|+..++.+++ +++....+ ..+.+|.+|+||++++...
T Consensus 81 pL~~A~~~~~~~~v------------~~Ll~~ga-------~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 81 PVHDAAREGFLDTL------------VVLHRAGA-------RLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp HHHHHHHHTCHHHH------------HHHHHHTC-------CSSCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHCCCHHHH------------HHHHHcCC-------CCcccCCCCCCHHHHHHHh
Confidence 99999999876543 12211122 2578899999999998753
No 103
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.51 E-value=7.3e-15 Score=118.00 Aligned_cols=72 Identities=28% Similarity=0.171 Sum_probs=38.9
Q ss_pred CcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCCCCcHHH
Q 041634 48 TIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYNGNTILH 114 (363)
Q Consensus 48 d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~GnT~LH 114 (363)
|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+||||+|+. +..++.+|.+|+||||
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VN----ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SS----CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 44445555555555555555555544444 22 344445555555544 2234556777888888
Q ss_pred HHHhhCcccC
Q 041634 115 MAGIKIKDYG 124 (363)
Q Consensus 115 lAa~~~~~~~ 124 (363)
+|+..++.++
T Consensus 81 ~A~~~~~~~~ 90 (115)
T 2l6b_A 81 LAKKNGHHEI 90 (115)
T ss_dssp HHHTTTCHHH
T ss_pred HHHHCCCHHH
Confidence 8887776443
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.51 E-value=2.7e-14 Score=130.76 Aligned_cols=109 Identities=12% Similarity=-0.051 Sum_probs=89.7
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
|.+.+.....+.++||+|+.. |+.+.+ ++|++ .+.+++.+| .+|.||||+|+..|+.++|+.|++++++ ..
T Consensus 67 ~~~~~~~d~~g~t~L~~A~~~-g~~~~v-~~Ll~-~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~---- 138 (244)
T 3ui2_A 67 DRDVDAVDENGRTALLFVAGL-GSDKCV-RLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IE---- 138 (244)
T ss_dssp TCCTTCBCTTSCBHHHHHHHH-TCHHHH-HHHHH-TTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----
T ss_pred CCCCCCcCCCCCCHHHHHHHC-CCHHHH-HHHHH-cCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC----
Confidence 445555666788999999998 887755 55555 366777777 7899999999999999999999999998 44
Q ss_pred ccCCCCCcHHHHHHhchhhccccCCCCcHHHHHHhhCcccCc
Q 041634 84 RQNKAGNTIQHETATRRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|.+|+||||+|++ ...+..|.||||+|+..|+.+++
T Consensus 139 ~~d~~g~t~l~~A~~----~~~~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 139 VEDERGLTALELARE----ILKTTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp CCCTTCCCHHHHHHH----HHTTCCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHH----HHhccCCCCHHHHHHHcChHHHH
Confidence 689999999999987 33457899999999999987654
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.48 E-value=5.4e-14 Score=122.61 Aligned_cols=109 Identities=12% Similarity=-0.051 Sum_probs=87.8
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccC-cCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhh
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFT-IHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMT 83 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~ 83 (363)
|.+.+.....+.++||+|+.. |+.+.+ ++|.+ .+.+++.+| .+|.||||+|+..|+.++++.|++++++ ..
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~-~~~~~v-~~Ll~-~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~---- 137 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGL-GSDKCV-RLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IE---- 137 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHH-TCHHHH-HHHHH-TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC-TT----
T ss_pred cCCCCCcCCCCCCHHHHHHHc-CCHHHH-HHHHH-cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-Cc----
Confidence 445555566788999999998 887755 55555 356777777 8899999999999999999999999988 44
Q ss_pred ccCCCCCcHHHHHHhchhhccccCCCCcHHHHHHhhCcccCc
Q 041634 84 RQNKAGNTIQHETATRRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 84 ~~d~~G~t~LH~Aa~~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
.+|.+|+||||+|++. .....+.|+|++|+..|+.+++
T Consensus 138 ~~d~~g~tpl~~A~~~----~~~~~~~~~l~~a~~~~~~~i~ 175 (183)
T 3deo_A 138 VEDERGLTALELAREI----LKTTPKGNPMQFGRRIGLEKVI 175 (183)
T ss_dssp CCCTTSCCHHHHHHHH----HHTCCCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHh----ccCcccccHHHHHHHcCHHHHH
Confidence 6899999999999882 2335788999999999875543
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.45 E-value=2.1e-13 Score=105.54 Aligned_cols=69 Identities=16% Similarity=0.037 Sum_probs=48.2
Q ss_pred CCccccccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 5 GIEDTDAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 5 ~~~~~~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
|.+.+......+++||+|+.. |+.+.+ ++|.+ .+.+++.+|.+|.||||+|++.|+.++++.|++.+++
T Consensus 25 g~~~n~~d~~g~t~L~~A~~~-~~~~~v-~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 25 GADVNAKDKNGRTPLHLAARN-GHLEVV-KLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT-TCHHHH-HHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCcccCCCCCCHHHHHHHc-CCHHHH-HHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 445555556677888888876 766644 44444 2566777788888888888888888888888887653
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.44 E-value=1.2e-13 Score=110.75 Aligned_cols=93 Identities=22% Similarity=0.179 Sum_probs=77.6
Q ss_pred cccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCc
Q 041634 12 KLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 91 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t 91 (363)
....+++||+|+.. |+.+.+..++.. +.+++..|.+|.||||.|+..|+.++++.|++.+++ .. .+|..|+|
T Consensus 6 d~~g~t~L~~A~~~-~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~----~~d~~g~t 77 (115)
T 2l6b_A 6 SKDGNTPLHNAAKN-GHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VN----ARSKDGNT 77 (115)
T ss_dssp SCSSCCHHHHHHHH-TCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TT----CCCTTCCC
T ss_pred CCCCCCHHHHHHHc-CCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-Cc----ccCCCCCC
Confidence 45577899999998 888766655544 567888999999999999999999999999999988 44 68999999
Q ss_pred HHHHHHh-------------chhhccccCCCCcH
Q 041634 92 IQHETAT-------------RRLVRKIDYNGNTI 112 (363)
Q Consensus 92 ~LH~Aa~-------------~~lin~~D~~GnT~ 112 (363)
|||+|+. +..+|.+|.+|.||
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 9999997 56678888888887
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.42 E-value=8.4e-14 Score=111.60 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=47.6
Q ss_pred cccccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCC
Q 041634 10 DAKLKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPD 76 (363)
Q Consensus 10 ~~~~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~ 76 (363)
+...+++++||+|+.. |+.+.+..++.. +.+++.+|.+|.||||+|+..|+.+++++|++.+++
T Consensus 19 ~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~ 82 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARA-GQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82 (110)
T ss_dssp ---CCHHHHHHHHHHH-TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccCCccchHHHHHHHc-CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3445677888888887 877755555543 566777888888888888888888888888888777
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.37 E-value=1.5e-12 Score=104.27 Aligned_cols=78 Identities=21% Similarity=0.049 Sum_probs=64.5
Q ss_pred CcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcHHHHHHh-------------chhhccccCC
Q 041634 42 HALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTIQHETAT-------------RRLVRKIDYN 108 (363)
Q Consensus 42 ~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~LH~Aa~-------------~~lin~~D~~ 108 (363)
......|.+|.||||.|+..|+.+++++|++.+++ +. .+|..|+||||+|+. +..++.+|.+
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~----~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 89 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VA----AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF 89 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CC----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccC
Confidence 44556788999999999999999999999999988 54 689999999999998 4567889999
Q ss_pred CCcHHHHHHhhCcccC
Q 041634 109 GNTILHMAGIKIKDYG 124 (363)
Q Consensus 109 GnT~LHlAa~~~~~~~ 124 (363)
|+||||+|++.++.++
T Consensus 90 g~tpl~~A~~~~~~~~ 105 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDL 105 (110)
T ss_dssp SCCHHHHHHHHTCHHH
T ss_pred CCcHHHHHHHcCCHHH
Confidence 9999999999987544
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.29 E-value=2.5e-13 Score=132.93 Aligned_cols=108 Identities=11% Similarity=0.044 Sum_probs=79.4
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCC-cccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDH-ALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~-~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
+.+++||.|+.. |+.+.+..++...... ..+..|.+|.||||+||++|+.++|++|++++++ ... ....+.+ +||
T Consensus 91 ~~~T~Lh~Aa~~-G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad-~~~-~~i~~~~-~Tp 166 (376)
T 2aja_A 91 KSEVICFVAAIT-GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT-EIM-AMIQAEN-YHA 166 (376)
T ss_dssp CHHHHHHHHHHH-CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT-THH-HHHSHHH-HHH
T ss_pred CcCCHHHHHHHc-CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccc-cccCCCC-CCH
Confidence 356999999998 9988666666542211 1224566789999999999999999999999986 210 0022233 999
Q ss_pred HHHHHh-------------chhhcc--ccCCCCcHHHHHH-hhCcccCc
Q 041634 93 QHETAT-------------RRLVRK--IDYNGNTILHMAG-IKIKDYGS 125 (363)
Q Consensus 93 LH~Aa~-------------~~lin~--~D~~GnT~LHlAa-~~~~~~~~ 125 (363)
||+|+. +..++. +|.+|+||||+|+ ..|+.+++
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv 215 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI 215 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHH
Confidence 999998 344455 8899999999999 99987665
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.27 E-value=6.5e-12 Score=126.81 Aligned_cols=100 Identities=16% Similarity=-0.012 Sum_probs=71.6
Q ss_pred cccccHHHHHHHH---ccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCC
Q 041634 12 KLKINSELYNALM---IKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKA 88 (363)
Q Consensus 12 ~~~ln~~Lh~A~~---~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~ 88 (363)
...+.++||+|+. . |+.+ ++++|++ .+.+++.+|.+|+||||+||..|+.++|+.||+++++ .. .+|.+
T Consensus 168 ~~~g~t~Lh~A~~~a~~-g~~~-~v~~Ll~-~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~----~~d~~ 239 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQ-ASLP-LVDFIIQ-NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VG----TVNEA 239 (497)
T ss_dssp CCSCBCHHHHHHHTCCT-TTHH-HHHHHHH-HSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CS----CCCTT
T ss_pred ccccchHHHHHHHhccc-ccHH-HHHHHHH-cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CC----CcCCC
Confidence 5567899999965 5 6666 5555555 3678999999999999999999999999999999998 54 68999
Q ss_pred CCcHHHHHHh-------chhhccccCCCCcHHHHHHhh
Q 041634 89 GNTIQHETAT-------RRLVRKIDYNGNTILHMAGIK 119 (363)
Q Consensus 89 G~t~LH~Aa~-------~~lin~~D~~GnT~LHlAa~~ 119 (363)
|+||||+|+. +.++....+-..||+|.+...
T Consensus 240 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~ 277 (497)
T 3lvq_E 240 GETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSW 277 (497)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTCC-------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccc
Confidence 9999999998 344555555666899987653
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.20 E-value=2.9e-11 Score=117.90 Aligned_cols=99 Identities=12% Similarity=-0.029 Sum_probs=68.1
Q ss_pred ccccHHHHHHHHccCChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCCCcH
Q 041634 13 LKINSELYNALMIKKDEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTI 92 (363)
Q Consensus 13 ~~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G~t~ 92 (363)
....++||+|+.. |+.+. +++|++ .+.+++..|.+|.||||+|+..|+.++|++|++++++ .. .+|.+|+||
T Consensus 233 ~~g~TpLh~Aa~~-g~~~i-v~~LL~-~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~----~~d~~G~Tp 304 (368)
T 3jue_A 233 QDNATPLIQATAA-NSLLA-CEFLLQ-NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD-LG----ARDSEGRDP 304 (368)
T ss_dssp TTCCCHHHHHHHT-TCHHH-HHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TT----CCCTTSCCH
T ss_pred cCCCCHHHHHHHC-CCHHH-HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC-CC----CcCCCCCCH
Confidence 5678999999998 88774 455555 3678899999999999999999999999999999998 44 689999999
Q ss_pred HHHHHh----------------chhhccccCCCCcHHHHHHhh
Q 041634 93 QHETAT----------------RRLVRKIDYNGNTILHMAGIK 119 (363)
Q Consensus 93 LH~Aa~----------------~~lin~~D~~GnT~LHlAa~~ 119 (363)
||+|+. .......+.+|.|+|+++...
T Consensus 305 L~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 305 LTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 999997 112223455667777666544
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.19 E-value=3.3e-11 Score=112.67 Aligned_cols=99 Identities=15% Similarity=0.025 Sum_probs=77.3
Q ss_pred cccccHHHHHHHHccC--ChHHHHHHhhcCCCCcccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhccCCCC
Q 041634 12 KLKINSELYNALMIKK--DEQKVSELCRKVPDHALYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAG 89 (363)
Q Consensus 12 ~~~ln~~Lh~A~~~~g--~~~~v~~lL~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~~d~~G 89 (363)
...++++||+|+.. | +..+++++|++. +.+++.+|.+|.||||+|+..|+.++|+.|++++++ .. .+|.+|
T Consensus 166 ~~~g~t~Lh~A~~~-~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~----~~d~~g 238 (278)
T 1dcq_A 166 HEPDETALHLAVRS-VDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IE----IANESG 238 (278)
T ss_dssp SSTTCBHHHHHHHH-CCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT----CCCTTS
T ss_pred ccCCCCcchHHHHh-cccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC----CccCCC
Confidence 35578999999986 4 345566766663 678899999999999999999999999999999998 54 689999
Q ss_pred CcHHHHHHhc-------hhhccccCCCCcHHHHHHhh
Q 041634 90 NTIQHETATR-------RLVRKIDYNGNTILHMAGIK 119 (363)
Q Consensus 90 ~t~LH~Aa~~-------~lin~~D~~GnT~LHlAa~~ 119 (363)
+||||+|+.. .++. ...+.+++|.++..
T Consensus 239 ~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~v~~ 273 (278)
T 1dcq_A 239 ETPLDIAKRLKHEHCEELLTQ--ALSGRFNSHVHVEY 273 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH--HHTTCCCSSCCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHH--cCCCCCCcceeeec
Confidence 9999999982 1222 22356677766543
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.16 E-value=2.2e-12 Score=126.27 Aligned_cols=103 Identities=8% Similarity=-0.103 Sum_probs=77.7
Q ss_pred cccHHHHHHHHccCChHHHHHHhhcCCCC-c-ccccCcCCCcHHhHHHhcCcHHHHHHHHHhCCCCchhhhhc--cCCCC
Q 041634 14 KINSELYNALMIKKDEQKVSELCRKVPDH-A-LYVFTIHDDTVLLMATYTKKSDLVIKLLDELPDQSLDKMTR--QNKAG 89 (363)
Q Consensus 14 ~ln~~Lh~A~~~~g~~~~v~~lL~~~~~~-~-~~~~d~~G~TpLh~Aa~~G~~eiV~~LL~~~p~~~~~~~~~--~d~~G 89 (363)
+.+++||.|+.. |+.+.+..| .+.... . .+..+.+ .||||.||+.|+.++|++|++++++ .. . +|.+|
T Consensus 127 ~~~tpL~~Aa~~-G~~eiv~~L-l~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~----~~~~d~~g 198 (376)
T 2aja_A 127 ENYQAFRLAAEN-GHLHVLNRL-CELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-EA----TAMIQAEN 198 (376)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHH-HHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GH----HHHHHHHH
T ss_pred CCCCHHHHHHHc-CCHHHHHHH-HhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cc----hhccCCCC
Confidence 456799999998 887755544 443321 0 2222333 9999999999999999999999998 33 3 78899
Q ss_pred CcHHHHHH-h-------chhhccccCCCCcHHHHHHhhCcccCc
Q 041634 90 NTIQHETA-T-------RRLVRKIDYNGNTILHMAGIKIKDYGS 125 (363)
Q Consensus 90 ~t~LH~Aa-~-------~~lin~~D~~GnT~LHlAa~~~~~~~~ 125 (363)
+||||+|+ . +.++. ...+|+||||+|+..|+.+++
T Consensus 199 ~TpL~~Aa~~~G~~eiv~~Ll~-~ga~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 199 YYAFRWAAVGRGHHNVINFLLD-CPVMLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HHHHHHHHSTTCCHHHHHHHTT-SHHHHHHHHHCTTTTTTTTHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHh-CCCccchHHHHHHHCCCHHHH
Confidence 99999999 7 23333 334699999999999988765
No 115
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=37.52 E-value=1.5e+02 Score=27.34 Aligned_cols=60 Identities=23% Similarity=0.175 Sum_probs=36.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHh
Q 041634 259 PNKMILGFTFLLLSVCLMMVAFIATILLMIKSEESWAKIMLYTCTFIPVGVFALSYFPLYITKSV 323 (363)
Q Consensus 259 ~~~l~~~~~~l~~s~~~m~~aF~~~~~~v~~~~~~w~~i~i~~~~~~~~~~~~~~~~~l~~~~~~ 323 (363)
+.|+.+|.+ +.-.++.|...+.-.+|+.+.-.+|-++.+.|+.+.+++++.+-+-..+.+
T Consensus 243 ~~Rv~lgit-----~lLt~tv~~~~~~~~lP~~S~v~~id~~~~~~~~~v~~slle~~~v~~l~~ 302 (347)
T 3rhw_A 243 PARVTLGVT-----TLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIAN 302 (347)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHHHHTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEee-----hHHHHHHHHHHHHhhCCCccceeHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456655533 222356677777777887765556777888877766766666555444333
Done!