Query 041635
Match_columns 345
No_of_seqs 173 out of 1315
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 09:12:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041635.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041635hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 5.5E-97 1E-101 786.2 28.2 338 3-344 270-630 (1094)
2 PLN02915 cellulose synthase A 100.0 1.1E-96 2E-101 784.3 29.0 338 3-344 192-552 (1044)
3 PLN02400 cellulose synthase 100.0 6.2E-97 1E-101 788.2 26.7 338 3-344 261-621 (1085)
4 PLN02638 cellulose synthase A 100.0 1.7E-96 4E-101 784.6 25.8 339 2-344 253-614 (1079)
5 PLN02189 cellulose synthase 100.0 2.2E-96 5E-101 781.7 25.4 339 2-344 235-596 (1040)
6 PLN02195 cellulose synthase A 100.0 2.9E-95 6E-100 769.8 27.4 338 3-344 157-517 (977)
7 PLN02248 cellulose synthase-li 100.0 4.5E-94 9.7E-99 765.8 28.6 338 3-344 267-682 (1135)
8 PLN02893 Cellulose synthase-li 100.0 4.3E-92 9.3E-97 735.0 26.9 331 2-344 10-362 (734)
9 PLN02190 cellulose synthase-li 100.0 1.1E-91 2.4E-96 729.4 29.1 327 2-344 7-346 (756)
10 PF03552 Cellulose_synt: Cellu 100.0 1.8E-78 3.8E-83 629.1 19.5 248 96-344 1-264 (720)
11 TIGR03030 CelA cellulose synth 100.0 1.6E-35 3.4E-40 314.9 23.6 221 18-337 55-278 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.5E-35 5.4E-40 315.9 23.3 203 18-337 184-389 (852)
13 PRK05454 glucosyltransferase M 99.9 3.6E-22 7.9E-27 211.5 27.6 209 18-327 40-263 (691)
14 cd04191 Glucan_BSP_ModH Glucan 99.9 2.1E-21 4.6E-26 183.4 15.7 133 96-327 1-138 (254)
15 COG1215 Glycosyltransferases, 99.8 4.9E-20 1.1E-24 182.7 19.4 128 93-327 53-180 (439)
16 PRK14583 hmsR N-glycosyltransf 99.8 8.6E-19 1.9E-23 177.1 21.2 126 91-327 72-198 (444)
17 TIGR03111 glyc2_xrt_Gpos1 puta 99.8 1.5E-18 3.3E-23 175.2 20.0 117 90-311 45-162 (439)
18 PRK11204 N-glycosyltransferase 99.8 5.3E-18 1.1E-22 168.9 20.7 127 90-327 50-177 (420)
19 cd06421 CESA_CelA_like CESA_Ce 99.8 4.8E-18 1.1E-22 153.4 14.9 129 94-330 1-130 (234)
20 cd06437 CESA_CaSu_A2 Cellulose 99.8 1.5E-17 3.2E-22 151.8 15.5 129 94-327 1-129 (232)
21 TIGR03472 HpnI hopanoid biosyn 99.7 2E-16 4.3E-21 156.5 19.9 127 91-323 38-164 (373)
22 cd06427 CESA_like_2 CESA_like_ 99.7 1E-16 2.3E-21 147.7 14.8 128 94-327 1-128 (241)
23 cd06435 CESA_NdvC_like NdvC_li 99.7 6.5E-16 1.4E-20 140.6 15.0 124 97-326 1-125 (236)
24 TIGR03469 HonB hopene-associat 99.7 2.1E-15 4.5E-20 149.8 17.9 126 90-310 36-162 (384)
25 cd06439 CESA_like_1 CESA_like_ 99.7 8.8E-16 1.9E-20 141.0 12.1 127 90-327 25-151 (251)
26 cd02520 Glucosylceramide_synth 99.6 3.2E-15 6.9E-20 133.7 13.0 122 94-321 1-122 (196)
27 PRK14716 bacteriophage N4 adso 99.6 1.4E-14 3.1E-19 149.1 19.2 130 91-327 63-198 (504)
28 PF13641 Glyco_tranf_2_3: Glyc 99.6 2.4E-16 5.1E-21 142.6 4.1 127 94-326 1-127 (228)
29 cd06436 GlcNAc-1-P_transferase 99.6 8.3E-15 1.8E-19 131.0 13.7 125 98-328 1-132 (191)
30 PRK11234 nfrB bacteriophage N4 99.6 5.2E-14 1.1E-18 150.4 19.0 125 90-323 59-191 (727)
31 cd04192 GT_2_like_e Subfamily 99.6 2E-14 4.4E-19 128.8 12.8 122 98-325 1-122 (229)
32 cd06434 GT2_HAS Hyaluronan syn 99.6 2.5E-14 5.3E-19 129.7 13.5 119 95-327 1-119 (235)
33 cd06438 EpsO_like EpsO protein 99.6 2E-14 4.3E-19 127.0 12.0 121 98-327 1-122 (183)
34 cd04184 GT2_RfbC_Mx_like Myxoc 99.5 2.6E-13 5.7E-18 120.0 14.8 122 94-324 1-123 (202)
35 cd04190 Chitin_synth_C C-termi 99.5 5.4E-14 1.2E-18 130.8 10.0 52 267-327 64-116 (244)
36 cd04195 GT2_AmsE_like GT2_AmsE 99.5 3.3E-13 7.1E-18 119.5 14.4 121 97-327 1-123 (201)
37 cd04196 GT_2_like_d Subfamily 99.5 4.3E-13 9.3E-18 119.0 14.2 120 97-326 1-121 (214)
38 cd02525 Succinoglycan_BP_ExoA 99.4 1.5E-12 3.3E-17 118.1 14.0 117 95-321 1-117 (249)
39 PLN02726 dolichyl-phosphate be 99.4 1.9E-12 4.1E-17 119.8 14.5 124 91-321 6-129 (243)
40 PRK10073 putative glycosyl tra 99.4 5.6E-12 1.2E-16 123.2 14.7 109 93-309 5-113 (328)
41 PRK10018 putative glycosyl tra 99.4 6.8E-12 1.5E-16 120.3 14.8 109 92-307 3-111 (279)
42 PTZ00260 dolichyl-phosphate be 99.4 1.6E-11 3.4E-16 120.4 17.5 117 91-308 67-189 (333)
43 cd06423 CESA_like CESA_like is 99.4 1.5E-11 3.2E-16 103.1 13.2 119 98-326 1-120 (180)
44 PF00535 Glycos_transf_2: Glyc 99.4 2E-12 4.3E-17 108.6 7.9 105 97-308 1-105 (169)
45 cd06442 DPM1_like DPM1_like re 99.3 9.3E-12 2E-16 111.8 12.4 114 98-321 1-114 (224)
46 cd06433 GT_2_WfgS_like WfgS an 99.3 1.4E-11 3.1E-16 107.3 13.1 117 97-327 1-118 (202)
47 PRK15489 nfrB bacteriophage N4 99.3 2.5E-11 5.3E-16 129.2 16.8 122 90-321 67-197 (703)
48 cd02510 pp-GalNAc-T pp-GalNAc- 99.3 1.4E-11 3E-16 117.5 12.8 112 97-310 1-113 (299)
49 cd04179 DPM_DPG-synthase_like 99.3 1.5E-11 3.2E-16 107.1 11.5 120 98-326 1-120 (185)
50 cd06420 GT2_Chondriotin_Pol_N 99.3 4E-11 8.6E-16 104.3 14.1 107 98-310 1-107 (182)
51 PRK13915 putative glucosyl-3-p 99.3 1.2E-11 2.7E-16 119.9 11.7 121 92-320 29-152 (306)
52 cd06913 beta3GnTL1_like Beta 1 99.3 6.7E-11 1.5E-15 107.0 13.2 110 98-307 1-110 (219)
53 cd04188 DPG_synthase DPG_synth 99.3 3.7E-11 8E-16 108.1 10.7 108 98-310 1-111 (211)
54 cd04185 GT_2_like_b Subfamily 99.3 5E-11 1.1E-15 106.0 11.4 108 98-310 1-108 (202)
55 cd04186 GT_2_like_c Subfamily 99.2 1.1E-10 2.3E-15 98.9 12.1 109 98-320 1-110 (166)
56 PRK10063 putative glycosyl tra 99.2 9.7E-11 2.1E-15 110.1 12.4 50 94-147 1-51 (248)
57 cd02522 GT_2_like_a GT_2_like_ 99.2 1.8E-10 3.8E-15 103.3 12.5 101 96-310 1-101 (221)
58 COG2943 MdoH Membrane glycosyl 99.2 5.7E-09 1.2E-13 106.4 21.9 222 4-326 48-282 (736)
59 cd04187 DPM1_like_bac Bacteria 99.1 6.7E-10 1.5E-14 97.2 12.2 50 247-306 56-105 (181)
60 PRK10714 undecaprenyl phosphat 99.1 5.4E-10 1.2E-14 109.2 12.7 41 262-307 76-116 (325)
61 COG0463 WcaA Glycosyltransfera 99.1 1.1E-09 2.4E-14 90.8 11.5 50 93-148 2-51 (291)
62 cd02511 Beta4Glucosyltransfera 99.0 5.7E-09 1.2E-13 95.9 12.8 42 262-308 57-98 (229)
63 cd00761 Glyco_tranf_GTA_type G 99.0 1.1E-08 2.5E-13 83.4 13.0 113 98-321 1-114 (156)
64 cd02526 GT2_RfbF_like RfbF is 99.0 5.3E-09 1.1E-13 94.9 10.9 49 248-303 49-97 (237)
65 TIGR01556 rhamnosyltran L-rham 98.6 2.7E-07 5.9E-12 87.0 11.8 69 246-324 45-113 (281)
66 PF10111 Glyco_tranf_2_2: Glyc 98.6 5.2E-07 1.1E-11 86.1 12.3 61 262-328 74-134 (281)
67 COG1216 Predicted glycosyltran 98.4 3.3E-06 7.1E-11 81.4 12.7 123 93-326 2-126 (305)
68 KOG2978 Dolichol-phosphate man 98.3 5.9E-06 1.3E-10 75.2 10.3 54 246-309 63-116 (238)
69 KOG2977 Glycosyltransferase [G 98.2 1.6E-05 3.4E-10 76.4 12.4 113 95-306 68-185 (323)
70 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 0.00011 2.4E-09 72.6 13.3 44 96-143 2-45 (334)
71 PF13506 Glyco_transf_21: Glyc 97.8 5.2E-05 1.1E-09 68.0 6.7 59 261-327 15-73 (175)
72 PF03142 Chitin_synth_2: Chiti 97.5 0.00047 1E-08 71.9 9.7 56 91-149 22-83 (527)
73 KOG2547 Ceramide glucosyltrans 96.9 0.033 7.1E-07 55.8 15.1 131 91-326 82-213 (431)
74 KOG3738 Predicted polypeptide 96.4 0.0078 1.7E-07 60.7 7.0 50 90-142 120-169 (559)
75 KOG3737 Predicted polypeptide 96.2 0.03 6.5E-07 56.5 9.5 49 90-142 151-200 (603)
76 KOG3736 Polypeptide N-acetylga 95.9 0.0089 1.9E-07 63.0 4.5 50 90-142 138-187 (578)
77 PF13704 Glyco_tranf_2_4: Glyc 95.6 0.074 1.6E-06 42.1 8.1 35 108-147 3-37 (97)
78 PF13712 Glyco_tranf_2_5: Glyc 94.0 0.26 5.7E-06 45.7 8.3 46 262-311 40-86 (217)
79 PF03452 Anp1: Anp1; InterPro 89.5 7 0.00015 37.8 12.4 56 91-150 22-79 (269)
80 PF03071 GNT-I: GNT-I family; 88.5 2.4 5.1E-05 43.7 8.9 49 91-144 90-139 (434)
81 PF13632 Glyco_trans_2_3: Glyc 87.9 0.43 9.3E-06 41.9 2.8 28 283-311 1-28 (193)
82 KOG2571 Chitin synthase/hyalur 84.5 1.2 2.6E-05 49.2 4.6 47 264-313 426-473 (862)
83 TIGR02460 osmo_MPGsynth mannos 76.6 8.2 0.00018 38.7 6.9 45 260-307 140-184 (381)
84 PRK14503 mannosyl-3-phosphogly 76.5 8.2 0.00018 38.9 6.9 54 261-322 142-195 (393)
85 PF13896 Glyco_transf_49: Glyc 74.3 4 8.6E-05 40.1 4.2 45 269-318 120-164 (317)
86 PRK09382 ispDF bifunctional 2- 70.9 9.9 0.00021 38.4 6.2 58 264-325 83-159 (378)
87 PF09488 Osmo_MPGsynth: Mannos 64.5 40 0.00087 34.1 8.8 43 261-306 141-183 (381)
88 PRK14502 bifunctional mannosyl 57.0 34 0.00074 37.4 7.3 55 260-322 145-199 (694)
89 cd02540 GT2_GlmU_N_bac N-termi 56.9 1.1E+02 0.0024 27.3 9.8 44 262-308 73-117 (229)
90 PF01644 Chitin_synth_1: Chiti 54.1 1.7E+02 0.0036 26.4 13.0 53 247-305 110-162 (163)
91 PF05679 CHGN: Chondroitin N-a 53.7 2.1E+02 0.0044 30.1 12.4 47 248-302 316-362 (499)
92 TIGR03584 PseF pseudaminic aci 51.3 2E+02 0.0043 26.4 10.7 47 262-308 76-122 (222)
93 COG4092 Predicted glycosyltran 43.4 68 0.0015 31.5 6.3 80 245-327 61-141 (346)
94 PLN02728 2-C-methyl-D-erythrit 40.9 65 0.0014 30.6 5.8 60 265-326 104-188 (252)
95 TIGR02665 molyb_mobA molybdopt 38.9 1.1E+02 0.0024 26.5 6.7 41 262-307 73-114 (186)
96 PF04724 Glyco_transf_17: Glyc 36.3 1.1E+02 0.0024 30.8 6.8 35 266-302 165-199 (356)
97 cd02503 MobA MobA catalyzes th 36.0 1.4E+02 0.0031 25.6 6.9 41 262-306 69-109 (181)
98 TIGR01173 glmU UDP-N-acetylglu 33.4 2.7E+02 0.0059 27.8 9.3 42 263-308 76-118 (451)
99 cd02516 CDP-ME_synthetase CDP- 30.7 1.4E+02 0.003 26.6 6.0 43 264-307 80-122 (218)
100 TIGR02584 cas_NE0113 CRISPR-as 30.3 77 0.0017 29.6 4.3 70 98-172 1-74 (209)
101 PF09623 Cas_NE0113: CRISPR-as 29.0 5E+02 0.011 24.5 10.4 61 97-166 3-63 (224)
102 TIGR03310 matur_ygfJ molybdenu 28.6 1.5E+02 0.0032 25.6 5.7 42 263-307 75-116 (188)
103 KOG1413 N-acetylglucosaminyltr 27.2 1.1E+02 0.0025 31.0 5.1 47 93-144 66-113 (411)
104 PF12804 NTP_transf_3: MobA-li 26.9 1.7E+02 0.0037 24.5 5.7 57 262-324 70-127 (160)
105 PRK02726 molybdopterin-guanine 26.8 1.8E+02 0.004 26.0 6.1 40 264-307 80-119 (200)
106 cd04182 GT_2_like_f GT_2_like_ 26.7 1.2E+02 0.0026 25.8 4.8 43 262-307 74-117 (186)
107 COG4097 Predicted ferric reduc 26.5 2.7E+02 0.0059 28.7 7.6 68 92-178 342-409 (438)
108 PF01697 Glyco_transf_92: Glyc 25.2 73 0.0016 29.7 3.3 60 263-325 88-150 (285)
109 COG1211 IspD 4-diphosphocytidy 23.8 2.4E+02 0.0053 26.6 6.5 96 222-326 44-170 (230)
110 PRK00317 mobA molybdopterin-gu 22.6 1.8E+02 0.004 25.5 5.2 40 264-307 76-115 (193)
111 cd04181 NTP_transferase NTP_tr 20.6 2.8E+02 0.0061 24.2 6.1 41 262-308 81-121 (217)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=5.5e-97 Score=786.23 Aligned_cols=338 Identities=36% Similarity=0.645 Sum_probs=314.7
Q ss_pred CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
.+|||++.+.+..+ +.||+++++.+++++++|.||+++.... ..|+|+++++||+||+++|+|+|+.||.|++|.+
T Consensus 270 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~---a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t 346 (1094)
T PLN02436 270 RQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVND---AYGLWLTSVICEIWFAVSWILDQFPKWYPIERET 346 (1094)
T ss_pred CCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 58999999998644 4699999999999999999999885432 4889999999999999999999999999999999
Q ss_pred CCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhc
Q 041635 82 FPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFAS 155 (345)
Q Consensus 82 ~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~ 155 (345)
++++|.++ +++||.|||||||.||.||||.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||++||+
T Consensus 347 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 426 (1094)
T PLN02436 347 YLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR 426 (1094)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 99887653 256999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh------------ccccc----
Q 041635 156 SWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE------------KSSAT---- 219 (345)
Q Consensus 156 ~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~------------~~~~~---- 219 (345)
+||||||||+|||||||+||+.+.++++++.+|+|.+||++||++||+||+|||.+.+. +.+.|
T Consensus 427 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~ 506 (1094)
T PLN02436 427 KWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNN 506 (1094)
T ss_pred hhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCC
Confidence 99999999999999999999999998899999999999999999999999999986542 12333
Q ss_pred cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635 220 DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA 299 (345)
Q Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L 299 (345)
.++||+||||++++.++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+++
T Consensus 507 ~~dHp~IIqVll~~~~~-~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~ 585 (1094)
T PLN02436 507 VRDHPGMIQVFLGHSGV-RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAL 585 (1094)
T ss_pred CCCCccceEEEecCCCC-cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHH
Confidence 28999999999998653 46678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|++||||+||+.|+++|||||||+|+|++++|+|+|++++|||+.
T Consensus 586 r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~ 630 (1094)
T PLN02436 586 REAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN 630 (1094)
T ss_pred HHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence 999999999999999999999999999999999999999999984
No 2
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.1e-96 Score=784.32 Aligned_cols=338 Identities=36% Similarity=0.654 Sum_probs=314.1
Q ss_pred CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
.+|||++.+.+..+ +.||+++++.+++++++|.||+++. + ....|+|+++++||+||+++|+|+|+.+|.|++|.+
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~-~--~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 268 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTP-A--YDAYPLWLISVICEIWFALSWILDQFPKWFPINRET 268 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCc-C--CCchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 58999999998644 4699999999999999999999882 1 234899999999999999999999999999999999
Q ss_pred CCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhc
Q 041635 82 FPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFAS 155 (345)
Q Consensus 82 ~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~ 155 (345)
++++|..+ +++||.|||||||.||.||||.+++|||+|+||+|||.+||+|||+|||++++|+++|.||++||+
T Consensus 269 ~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 348 (1044)
T PLN02915 269 YLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFAR 348 (1044)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHH
Confidence 99888642 235999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh------------ccccc----
Q 041635 156 SWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE------------KSSAT---- 219 (345)
Q Consensus 156 ~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~------------~~~~~---- 219 (345)
+||||||||+|||||||+||+.+.++++++.+|+|++||++||++||+||+|||.+.+. +++.|
T Consensus 349 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~ 428 (1044)
T PLN02915 349 RWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNN 428 (1044)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999986543 22333
Q ss_pred cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635 220 DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA 299 (345)
Q Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L 299 (345)
.++||+||||++++.++ .|.++.++|+||||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+++
T Consensus 429 ~~dHp~IIqVll~~~~~-~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~ 507 (1044)
T PLN02915 429 TRDHPGMIQVYLGSEGA-LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAV 507 (1044)
T ss_pred CCCCccceEEeecCCCC-cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhh
Confidence 38999999999997553 46678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|++||||+||+.|+++||||+||+|+|++++|+|+|++++|||+.
T Consensus 508 r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~ 552 (1044)
T PLN02915 508 REAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDIN 552 (1044)
T ss_pred HhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeee
Confidence 999999999999999999999999999999999999999999984
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=6.2e-97 Score=788.17 Aligned_cols=338 Identities=37% Similarity=0.659 Sum_probs=314.8
Q ss_pred CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
.+|||++.+.+..+ ..||+++++.+++++++|.||+++.... ..|+|+++++||+||+++|+|+|+.||.|+.|.+
T Consensus 261 ~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~---~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 337 (1085)
T PLN02400 261 RLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKD---AYGLWLTSVICEIWFALSWLLDQFPKWYPINRET 337 (1085)
T ss_pred cCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 58999999998653 6799999999999999999999885432 4789999999999999999999999999999999
Q ss_pred CCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhc
Q 041635 82 FPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFAS 155 (345)
Q Consensus 82 ~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~ 155 (345)
++++|..+ +++||.|||||||.||.|||+.+++|||+|+||+|||.+||.|||+|||++++|+++|.||++||+
T Consensus 338 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~ 417 (1085)
T PLN02400 338 YLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAR 417 (1085)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 99887653 256999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhh-------h-----cccccc---
Q 041635 156 SWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEE-------E-----KSSATD--- 220 (345)
Q Consensus 156 ~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~-------~-----~~~~~~--- 220 (345)
+||||||||+|||||||+||+.+.++++++.+|+|.+||++||++||+||+|||.+.. + +++.|.
T Consensus 418 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~ 497 (1085)
T PLN02400 418 KWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNN 497 (1085)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCC
Confidence 9999999999999999999999999888899999999999999999999999998652 1 223332
Q ss_pred -CCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635 221 -KINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA 299 (345)
Q Consensus 221 -~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L 299 (345)
++||+||||++++.++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+++
T Consensus 498 ~~dHp~iIqVll~~~~~-~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~ 576 (1085)
T PLN02400 498 PRDHPGMIQVFLGHSGG-LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAL 576 (1085)
T ss_pred CCCCchhhhhhhcCCCC-cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhH
Confidence 8999999999998764 45678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|++||||+||+.|+++|||||||+|+|++++|+|+|++++|||+.
T Consensus 577 r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~ 621 (1085)
T PLN02400 577 KEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDIN 621 (1085)
T ss_pred HhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeecc
Confidence 999999999999999999999999999999999999999999984
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.7e-96 Score=784.56 Aligned_cols=339 Identities=37% Similarity=0.655 Sum_probs=314.8
Q ss_pred CCCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 041635 2 EPLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRR 80 (345)
Q Consensus 2 ~~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 80 (345)
..+|||++.+.+..+ ..||+++++.+++++++|.||+++... ...|+|+++++||+||+++|+|+|+.||.|++|.
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~---~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 329 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVR---NAYALWLISVICEIWFALSWILDQFPKWLPVNRE 329 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCC---ccHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 368999999998653 679999999999999999999988542 3589999999999999999999999999999999
Q ss_pred CCCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhh
Q 041635 81 VFPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFA 154 (345)
Q Consensus 81 ~~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a 154 (345)
+++++|.++ +++||.|||||||.||.||||.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||++||
T Consensus 330 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 409 (1079)
T PLN02638 330 TYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFA 409 (1079)
T ss_pred cCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHH
Confidence 999887653 25699999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh-------cc-----ccc---
Q 041635 155 SSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE-------KS-----SAT--- 219 (345)
Q Consensus 155 ~~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~-------~~-----~~~--- 219 (345)
++||||||||+|||||||+||+.+.++++++.+|+|.+||++||++||+||+|||.+..+ +| +.|
T Consensus 410 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~ 489 (1079)
T PLN02638 410 RKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGN 489 (1079)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCC
Confidence 999999999999999999999999999999999999999999999999999999986521 22 333
Q ss_pred -cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHH
Q 041635 220 -DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTS 298 (345)
Q Consensus 220 -~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~ 298 (345)
.++||+|+||++++.++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||++|||++
T Consensus 490 ~~~dHp~IiqVll~~~~~-~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~a 568 (1079)
T PLN02638 490 NTRDHPGMIQVFLGHSGG-LDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKA 568 (1079)
T ss_pred CCCCCHHHHHHHhcCCCc-cccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHH
Confidence 28999999999988764 4567789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 299 AKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 299 L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|+++||||+||+.|+++|||||||+|+|++++|||+|++++|||+.
T Consensus 569 lr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~ 614 (1079)
T PLN02638 569 LREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDIN 614 (1079)
T ss_pred HHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccc
Confidence 9999999999999999999999999999999999999999999974
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.2e-96 Score=781.70 Aligned_cols=339 Identities=36% Similarity=0.652 Sum_probs=314.1
Q ss_pred CCCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 041635 2 EPLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRR 80 (345)
Q Consensus 2 ~~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 80 (345)
..+|||++.+.+..+ +.||+++++.+++++++|.||+++.... +.|+|+++++||+||+++|+|+|+.||.|++|.
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~---~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R~ 311 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHD---AIGLWLTSIICEIWFAVSWILDQFPKWFPIDRE 311 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCcc---chHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 368999999998654 4699999999999999999999885432 389999999999999999999999999999999
Q ss_pred CCCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhh
Q 041635 81 VFPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFA 154 (345)
Q Consensus 81 ~~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a 154 (345)
+++++|.++ +++||.|||||||.||.||||.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||++||
T Consensus 312 t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 391 (1040)
T PLN02189 312 TYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFA 391 (1040)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHH
Confidence 999887653 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh-------cc-----ccc---
Q 041635 155 SSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE-------KS-----SAT--- 219 (345)
Q Consensus 155 ~~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~-------~~-----~~~--- 219 (345)
++||||||||+|||||||+||+.+.++++++.+|+|.+||++||++||+||+||+.+..+ ++ +.|
T Consensus 392 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~ 471 (1040)
T PLN02189 392 RKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGN 471 (1040)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCC
Confidence 999999999999999999999999998899999999999999999999999999986421 22 333
Q ss_pred -cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHH
Q 041635 220 -DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTS 298 (345)
Q Consensus 220 -~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~ 298 (345)
.++||+|+||++++.++ .+.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||++|||++
T Consensus 472 ~~~dHp~IiQVll~~~~~-~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~a 550 (1040)
T PLN02189 472 NTRDHPGMIQVFLGHSGG-HDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKA 550 (1040)
T ss_pred CCCCCHHHHHHHhcCCCC-ccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHH
Confidence 28999999999998764 3567889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 299 AKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 299 L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|+++||||+||+.|+++|||||||+|+|++++|||+|++++|||+.
T Consensus 551 lr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~ 596 (1040)
T PLN02189 551 VREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 596 (1040)
T ss_pred HHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeee
Confidence 9999999999999999999999999999999999999999999974
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.9e-95 Score=769.78 Aligned_cols=338 Identities=35% Similarity=0.644 Sum_probs=313.4
Q ss_pred CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
.+|||++.+.+..+ +.+|+++++.+++++++|.||+++..+ .+.|+|+++++||+||+++|+|+|+.||.|++|.+
T Consensus 157 ~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~---~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 233 (977)
T PLN02195 157 YEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD---SAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRET 233 (977)
T ss_pred cCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc---cchHHHHHHHHHHHHHHHHHHHhcccccccccceE
Confidence 47999999998654 469999999999999999999987543 24589999999999999999999999999999999
Q ss_pred CCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhc
Q 041635 82 FPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFAS 155 (345)
Q Consensus 82 ~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~ 155 (345)
++++|.++ +++||.|||||||.||.||||.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||++||+
T Consensus 234 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 313 (977)
T PLN02195 234 YIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFAR 313 (977)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 99887653 257999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh------------ccccc----
Q 041635 156 SWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE------------KSSAT---- 219 (345)
Q Consensus 156 ~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~------------~~~~~---- 219 (345)
+||||||||+||||||++||+.+.++++++.+|+|.+||++||++||+||+|||.+.+. +++.|
T Consensus 314 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~ 393 (977)
T PLN02195 314 KWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNN 393 (977)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCC
Confidence 99999999999999999999999998888899999999999999999999999986543 12333
Q ss_pred cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635 220 DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA 299 (345)
Q Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L 299 (345)
.++||+||||++++.++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||++++|++|
T Consensus 394 ~~dHp~IIqVll~~~~~-~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~l 472 (977)
T PLN02195 394 TRDHPGMIQVFLGETGA-RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAV 472 (977)
T ss_pred CCCCcchhhhhccCCCC-cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHH
Confidence 28999999999987653 46678899999999999999999999999999999999999999999999999999988999
Q ss_pred HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
+++||||+||+.|+++|||||||+|+|++++|||+|++++|||+.
T Consensus 473 r~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~ 517 (977)
T PLN02195 473 REAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVN 517 (977)
T ss_pred HHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeee
Confidence 999999999999999999999999999999999999999999974
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4.5e-94 Score=765.80 Aligned_cols=338 Identities=36% Similarity=0.603 Sum_probs=307.1
Q ss_pred CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
.+|||++.+.+..+ ..||+++++.+++++++|.||+.+. + ....|+|+++++||+||+++|+|+|+.||.|++|.+
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~-~--~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t 343 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNP-N--EDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRAT 343 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCC-C--CcchHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 37999999998654 3699999999999999999999882 2 134899999999999999999999999999999999
Q ss_pred CCCCCCcC-----------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHH
Q 041635 82 FPERLPEN-----------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQA 150 (345)
Q Consensus 82 ~~~~l~~~-----------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea 150 (345)
++++|.++ +++||.|||||||.||.|||+.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||
T Consensus 344 ~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EA 423 (1135)
T PLN02248 344 DLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEA 423 (1135)
T ss_pred CHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHHH
Confidence 98877543 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhh---------------h-
Q 041635 151 CAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEE---------------E- 214 (345)
Q Consensus 151 ~~~a~~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~---------------~- 214 (345)
++||+.||||||||+|||||||+||+.+.++++++..|+|++||++||++||+||+|||.+.+ +
T Consensus 424 a~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~ 503 (1135)
T PLN02248 424 ASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKA 503 (1135)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHHh
Confidence 999999999999999999999999999999888889999999999999999999999997632 0
Q ss_pred --------c-------------c----c----cc--------cCCCccceEEeecCCC-----------chhh--hcccc
Q 041635 215 --------K-------------S----S----AT--------DKINPSIVEVIIDKSD-----------DEVR--ANQVE 244 (345)
Q Consensus 215 --------~-------------~----~----~~--------~~~~~~i~~~~~~~~~-----------~~~~--~~~~~ 244 (345)
+ | + .| .++||+||||++++.+ +..| ..+.+
T Consensus 504 ~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~ 583 (1135)
T PLN02248 504 KKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIR 583 (1135)
T ss_pred hhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccc
Confidence 0 1 1 12 1799999999997544 1112 44568
Q ss_pred cCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCcee
Q 041635 245 MPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKF 324 (345)
Q Consensus 245 ~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F 324 (345)
+|+||||+||||||++||+||||||+++|+|+++||||||+++||||++|||++|+++||||+||+ |+++|||||||+|
T Consensus 584 lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF 662 (1135)
T PLN02248 584 LPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRF 662 (1135)
T ss_pred cceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred cCCCCCCccccccceeeeec
Q 041635 325 HNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 325 ~n~~~~Dp~~~~~~~f~~~~ 344 (345)
+|++++|||+|++++|||+.
T Consensus 663 ~~I~k~D~Ygn~~~Vffdi~ 682 (1135)
T PLN02248 663 EGIDPSDRYANHNTVFFDVN 682 (1135)
T ss_pred CCCCCCCccCCcceeeeeee
Confidence 99999999999999999974
No 8
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=4.3e-92 Score=734.96 Aligned_cols=331 Identities=45% Similarity=0.825 Sum_probs=304.3
Q ss_pred CCCCCceecccCcchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 2 EPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 2 ~~~~l~~~~~~~~~~~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
..+|||++++.+. ...+|+++++++++++..|+||+.+.... ...|.|+++++||+||+++|+++|..||+|++|.+
T Consensus 10 ~~~pL~~~~~~~~-~~~~R~~~~~~~~~i~~ll~~r~~~~~~~--~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 10 GAPPLHTCHPMRR-TIANRVFAVVYSCAILALLYHHVIALLHS--TTTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCceeeeecCC-chHHHHHHHHHHHHHHHHHHHHhcccccc--cchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 4589999999964 45689999999999999999999887653 23689999999999999999999999999999999
Q ss_pred CCCCCCcC--CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchh
Q 041635 82 FPERLPEN--EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLP 159 (345)
Q Consensus 82 ~~~~l~~~--~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~ 159 (345)
++++|..+ .+++|.|||||||.||.|||+.+++|||+|+||+|||.+||.|||+|||+|..|+++|.||++||+.|+|
T Consensus 87 ~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvP 166 (734)
T PLN02893 87 FIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLP 166 (734)
T ss_pred CHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcc
Confidence 99988743 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhh---------------hccccc-----
Q 041635 160 FCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEE---------------EKSSAT----- 219 (345)
Q Consensus 160 ~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~---------------~~~~~~----- 219 (345)
|||||+|||||||+||+.+. +++.+||++||++||+||+|||.+.+ ++++.|
T Consensus 167 FCrk~~ie~R~P~~YF~~~~--------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~ 238 (734)
T PLN02893 167 FCKKNKIVERCPEAYFSSNS--------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFT 238 (734)
T ss_pred cccccCCCcCCHHHHhccCC--------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCC
Confidence 99999999999999998773 35678999999999999999998732 124455
Q ss_pred cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635 220 DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA 299 (345)
Q Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L 299 (345)
.++||+|+||++++.++ .|.++.++|+++|++||||||++||+||||||+++++|+.+||||||+++||||++|+|++|
T Consensus 239 ~~dH~~ivqV~l~~~~~-~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l 317 (734)
T PLN02893 239 RQDHPTVIQVLLESGKD-KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTP 317 (734)
T ss_pred CCCCCceeeeeccCCCc-cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHH
Confidence 28999999999998653 45577889999999999999999999999999999999999999999999999999889999
Q ss_pred HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
+++||||+||+.++++|||||||+|+|++++|+|+|++++||+++
T Consensus 318 ~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~ 362 (734)
T PLN02893 318 LRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQIN 362 (734)
T ss_pred HHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHH
Confidence 999999999999999999999999999999999999999999875
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.1e-91 Score=729.38 Aligned_cols=327 Identities=38% Similarity=0.655 Sum_probs=299.0
Q ss_pred CCCCCceecccCcchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635 2 EPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV 81 (345)
Q Consensus 2 ~~~~l~~~~~~~~~~~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 81 (345)
..+|||++.+.+.. ++|++.++++++++.||.||+++.++. .++|+++++||+|++++|+|+++.+|+|+.|.+
T Consensus 7 ~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~ 80 (756)
T PLN02190 7 SLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN----DTVWLVAFLCESCFSFVWLLITCIKWSPAEYKP 80 (756)
T ss_pred CCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc----cHHHHHHHHHHHHHHHHHHHhccceeeecCCCC
Confidence 56899999999765 589999999999999999999998765 368999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHH
Q 041635 82 FPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFC 161 (345)
Q Consensus 82 ~~~~l~~~~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c 161 (345)
++++|.++-+++|+|||||||+||.|||+++++|||+|+|++|||.+||.|||+|||+++.|+++|.||++||+.|+|||
T Consensus 81 ~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFC 160 (756)
T PLN02190 81 YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFC 160 (756)
T ss_pred CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccc
Confidence 99988876567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh-cccc----------c-cCCCccceEE
Q 041635 162 RRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE-KSSA----------T-DKINPSIVEV 229 (345)
Q Consensus 162 ~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~-~~~~----------~-~~~~~~i~~~ 229 (345)
|||+|||||||+||+.+..+ +.+++|.+||++||++|||||+|||.+... .|.+ . .++||+|+||
T Consensus 161 rK~~IepRaPe~YF~~~~~~---~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqV 237 (756)
T PLN02190 161 KKYNVRVRAPFRYFLNPPVA---TEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKV 237 (756)
T ss_pred cccCCCcCCHHHHhcCCCCC---CCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEE
Confidence 99999999999999975432 345899999999999999999999997431 2211 1 2899999999
Q ss_pred eecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCC
Q 041635 230 IIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDP 309 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp 309 (345)
++++.++ +.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+++|++||||+|+
T Consensus 238 ll~~~~~--~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~ 315 (756)
T PLN02190 238 VWENKGG--VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQK 315 (756)
T ss_pred EecCCCC--ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCC
Confidence 9998553 44678999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635 310 KLS-PSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 310 ~~g-~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
+++ +++||||+||+|+ |+|+|++++|||+.
T Consensus 316 ~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~ 346 (756)
T PLN02190 316 SKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYL 346 (756)
T ss_pred CCCCCeeEEEeCchhhc-----cccCccceEEEEEe
Confidence 755 5899999999997 78999999999974
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.8e-78 Score=629.11 Aligned_cols=248 Identities=49% Similarity=0.876 Sum_probs=235.7
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
|||||||.||.||||.+++|||+|+||+|||.+||+|||+|||+++.|+++|.||++||+.||||||||+||||||++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhh-------hcc-----cccc----CCCccceEEeecCCCchhh
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEE-------EKS-----SATD----KINPSIVEVIIDKSDDEVR 239 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~-------~~~-----~~~~----~~~~~i~~~~~~~~~~~~~ 239 (345)
+.+.++++++.+|+|.+||++||++||+||+|||.+.+ ++| ..|. ++||+|+||++++.+ ..|
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~-~~~ 159 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPG-GKD 159 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCC-Ccc
Confidence 99999999999999999999999999999999997633 223 3332 999999999999765 357
Q ss_pred hcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEe
Q 041635 240 ANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQ 319 (345)
Q Consensus 240 ~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQ 319 (345)
.+|.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+.++++||||+||+.|+++||||
T Consensus 160 ~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQ 239 (720)
T PF03552_consen 160 VDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQ 239 (720)
T ss_pred cccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEe
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecCCCCCCccccccceeeeec
Q 041635 320 FPQKFHNISSNDIYDSQLRTTFQVH 344 (345)
Q Consensus 320 tPQ~F~n~~~~Dp~~~~~~~f~~~~ 344 (345)
|||+|+|++++|+|+|++++||++.
T Consensus 240 fpq~f~~i~~~d~y~~~~~~~~~~~ 264 (720)
T PF03552_consen 240 FPQRFDGIDKNDRYGNQNRVFFDIN 264 (720)
T ss_pred CCceeCCCCcCCCCCccceeeeecc
Confidence 9999999999999999999999974
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.6e-35 Score=314.91 Aligned_cols=221 Identities=27% Similarity=0.371 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHH-HHHHHHHHhhhccCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCcCCCCCCe
Q 041635 18 LNRLYSLIHVTA-LTSLIYYRVSSLASTPLA-SLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPA 95 (345)
Q Consensus 18 ~~R~~~~~~li~-~~~YL~wR~~~~~~~~~~-~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P~ 95 (345)
+-|++.++..++ .++|++||++.|++..+. +..+.++++++|+++.+..+++.+..++|..|.+.+ .+..++.+|+
T Consensus 55 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~~P~ 132 (713)
T TIGR03030 55 RPRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVP--LPLDPEEWPT 132 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC--CCCCcccCCe
Confidence 346666666555 599999999999987555 556777778999999888888888888887775432 2222578899
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
|||+||+|| |+++++++|+.+++++|||.++++|||+||||+|.|.....++.+
T Consensus 133 VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~----------------------- 186 (713)
T TIGR03030 133 VDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA----------------------- 186 (713)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-----------------------
Confidence 999999999 998899999999999999999999999999999976321111100
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccC
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREK 255 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 255 (345)
+..+.+..+++..++ ..+.|+.|++
T Consensus 187 -------------~~~~~~~~~~~l~~~------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 -------------EAAQRREELKEFCRK------------------------------------------LGVNYITRPR 211 (713)
T ss_pred -------------hhhhhHHHHHHHHHH------------------------------------------cCcEEEECCC
Confidence 000011222222221 1368999876
Q ss_pred CCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCCCCCCccc
Q 041635 256 RPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNISSNDIYD 334 (345)
Q Consensus 256 ~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~~~~Dp~~ 334 (345)
+.|+||||||+|+++ ++||+|+++|||+++. |++|++++++|. ||+ +|+|||||.|+|. ||++
T Consensus 212 ----n~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p---~~~~ 275 (713)
T TIGR03030 212 ----NVHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDPK----LFLVQTPHFFVSP---DPIE 275 (713)
T ss_pred ----CCCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCCC----EEEEeCCeeccCC---CHHh
Confidence 568999999999998 8999999999999998 999999999996 888 9999999999985 6766
Q ss_pred ccc
Q 041635 335 SQL 337 (345)
Q Consensus 335 ~~~ 337 (345)
+++
T Consensus 276 ~nl 278 (713)
T TIGR03030 276 RNL 278 (713)
T ss_pred hhh
Confidence 543
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=315.86 Aligned_cols=203 Identities=26% Similarity=0.461 Sum_probs=166.2
Q ss_pred HHHHH-HHHHHHHHHHHHHHHhhhccCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCcCCCCCCe
Q 041635 18 LNRLY-SLIHVTALTSLIYYRVSSLASTPLA-SLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPA 95 (345)
Q Consensus 18 ~~R~~-~~~~li~~~~YL~wR~~~~~~~~~~-~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P~ 95 (345)
+.|++ +++.++++++|++||++.|++..+. +..+.++++++|+|+.+..+++.+..+.|..|++. +++...+.+|+
T Consensus 184 ~~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~ 261 (852)
T PRK11498 184 FSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPT 261 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCc
Confidence 34444 3445555699999999999987554 56677777899999998888888888778776532 23433567899
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
|||+||||| |+.+++++|+.+++++|||.++++|||+|||++|.|. .+|++.+
T Consensus 262 VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~--------------~la~~~~---------- 314 (852)
T PRK11498 262 VDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFR--------------QFAQEVG---------- 314 (852)
T ss_pred EEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHH--------------HHHHHCC----------
Confidence 999999999 9988999999999999999999999999999999642 1344433
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccC
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREK 255 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 255 (345)
+.|+.|++
T Consensus 315 ------------------------------------------------------------------------v~yI~R~~ 322 (852)
T PRK11498 315 ------------------------------------------------------------------------VKYIARPT 322 (852)
T ss_pred ------------------------------------------------------------------------cEEEEeCC
Confidence 47888864
Q ss_pred CCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCCCCCCccc
Q 041635 256 RPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNISSNDIYD 334 (345)
Q Consensus 256 ~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~~~~Dp~~ 334 (345)
+.|+||||+|+|++. ++||+|+++|||+++. |++|++++++|. ||+ +|+|||||.|+|. ||++
T Consensus 323 ----n~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP~----VglVQtp~~f~n~---dp~~ 386 (852)
T PRK11498 323 ----HEHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDKK----LAMMQTPHHFFSP---DPFE 386 (852)
T ss_pred ----CCcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCCC----eEEEEcceeccCC---chHH
Confidence 468999999999998 8999999999999998 899999999875 898 9999999999984 7765
Q ss_pred ccc
Q 041635 335 SQL 337 (345)
Q Consensus 335 ~~~ 337 (345)
++.
T Consensus 387 rnl 389 (852)
T PRK11498 387 RNL 389 (852)
T ss_pred Hhh
Confidence 543
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.91 E-value=3.6e-22 Score=211.49 Aligned_cols=209 Identities=18% Similarity=0.174 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCh--hHHH----HHHHHHHHHHHHHHHHHHHhhhcccccCCCC---CCCC-
Q 041635 18 LNRLYSLIHVTALTSLIYYRVSSLASTPLAS--LPAQ----LLVFALELLLSLLWLLNQAYLWNPVSRRVFP---ERLP- 87 (345)
Q Consensus 18 ~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~--~~~w----~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~l~- 87 (345)
+.|++.++..++...|..|+.+.+++..+.. .+.- .++|..+.+.+...+++.+...+ .|.... +...
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 6788888888888999999999998765432 1111 12223344444444444444322 111111 0000
Q ss_pred cCCCCCCeeEEEeeccCCCCCChHHH----HHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHH
Q 041635 88 ENEQNLPAIDVFICTADPKKEPPLEV----MNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRR 163 (345)
Q Consensus 88 ~~~~~~P~VdV~V~tynp~~Ep~~~v----~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~ 163 (345)
......|+|+|+||+|| |+++.+ +.++.|+.+++||. +++|+|+|||+++.+.. .|. ..|..+|++
T Consensus 118 ~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~--~e~----~~~~~L~~~ 187 (691)
T PRK05454 118 PPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAA--AEE----AAWLELRAE 187 (691)
T ss_pred CCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHH--HHH----HHHHHHHHh
Confidence 11346799999999999 998655 44455566689974 79999999999986521 111 012223333
Q ss_pred hCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhccc
Q 041635 164 FGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQV 243 (345)
Q Consensus 164 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (345)
++
T Consensus 188 ~~------------------------------------------------------------------------------ 189 (691)
T PRK05454 188 LG------------------------------------------------------------------------------ 189 (691)
T ss_pred cC------------------------------------------------------------------------------
Confidence 22
Q ss_pred ccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCc
Q 041635 244 EMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQ 322 (345)
Q Consensus 244 ~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ 322 (345)
.-+++.|..|++ |.+.||||+|.+++..+ +++|||+++|||+++. +++|++++++|. ||+ +|.||||+
T Consensus 190 ~~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQt~~ 258 (691)
T PRK05454 190 GEGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQTLP 258 (691)
T ss_pred CCCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEeCCc
Confidence 124578887775 45789999999999865 6789999999999998 899999999997 998 99999999
Q ss_pred eecCC
Q 041635 323 KFHNI 327 (345)
Q Consensus 323 ~F~n~ 327 (345)
.+.|.
T Consensus 259 ~~~n~ 263 (691)
T PRK05454 259 VAVGA 263 (691)
T ss_pred cCcCC
Confidence 99986
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.87 E-value=2.1e-21 Score=183.39 Aligned_cols=133 Identities=18% Similarity=0.314 Sum_probs=103.7
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHc----CCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCC
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMA----LDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCP 171 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~la----ldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p 171 (345)
|+|+||+|| |++.++.+|+.+++. ++|+. +++|+|+|||+++... +.|. +.|..+|+++.
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--~~~~----~~~~~l~~~~~------ 64 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--LAEE----AAWLDLCEELG------ 64 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH--HHHH----HHHHHHHHHhC------
Confidence 689999999 999989999999875 56622 3999999999987321 1110 01111222221
Q ss_pred cccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEE
Q 041635 172 KVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYV 251 (345)
Q Consensus 172 ~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv 251 (345)
..++++|+
T Consensus 65 ------------------------------------------------------------------------~~~~v~~~ 72 (254)
T cd04191 65 ------------------------------------------------------------------------AQGRIYYR 72 (254)
T ss_pred ------------------------------------------------------------------------CCCcEEEE
Confidence 13578999
Q ss_pred eccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 252 SREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 252 ~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
.|++ +.|.||||||+++...+ +++++|+++|||+++. |++|.+++++|. ||+ +|+||+||+|.|.
T Consensus 73 ~r~~----~~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~ 138 (254)
T cd04191 73 RRRE----NTGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGA 138 (254)
T ss_pred EcCC----CCCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECC
Confidence 9987 45789999999998633 6789999999999998 999999999997 998 9999999999996
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=4.9e-20 Score=182.71 Aligned_cols=128 Identities=27% Similarity=0.347 Sum_probs=104.5
Q ss_pred CCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCc
Q 041635 93 LPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPK 172 (345)
Q Consensus 93 ~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~ 172 (345)
+|.|||+||+|| |+++++++|+.+++++|||. ++|+|+|||++|.|.+.+. +++.+.
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~--------------~~~~~~---- 109 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE--------------ELGAEY---- 109 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH--------------HHHhhc----
Confidence 599999999999 99889999999999999999 9999999999997764443 222110
Q ss_pred ccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEe
Q 041635 173 VYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVS 252 (345)
Q Consensus 173 ~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~ 252 (345)
+ |.+..+.
T Consensus 110 ---------------------------------------------------~---------------------~~~~~~~ 117 (439)
T COG1215 110 ---------------------------------------------------G---------------------PNFRVIY 117 (439)
T ss_pred ---------------------------------------------------C---------------------cceEEEe
Confidence 0 1122221
Q ss_pred ccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 253 REKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 253 R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
. +..+++|+||+|.++.. +++|+|+++|||+++. ||+|++++++|.|+.. +|.+|+||.+.+.
T Consensus 118 ~----~~~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~ 180 (439)
T COG1215 118 P----EKKNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPPV---GAVVGTPRIRNRP 180 (439)
T ss_pred c----cccCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCCe---eEEeCCceeeecC
Confidence 1 12468899999999998 7899999999999998 8999999999998774 3899999999875
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.82 E-value=8.6e-19 Score=177.09 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=103.1
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCC
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRC 170 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~ 170 (345)
...|.|+|+||+|| |+. .+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+.. ++
T Consensus 72 ~~~p~vsViIP~yN---E~~-~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~----------~~------- 128 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGL-NARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALL----------AE------- 128 (444)
T ss_pred CCCCcEEEEEEeCC---CHH-HHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHH----------Hh-------
Confidence 45799999999999 985 6899999999999995 9999999999998875554321 11
Q ss_pred CcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEE
Q 041635 171 PKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVY 250 (345)
Q Consensus 171 p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~y 250 (345)
.|++.+
T Consensus 129 --------------------------------------------------------------------------~~~v~v 134 (444)
T PRK14583 129 --------------------------------------------------------------------------DPRLRV 134 (444)
T ss_pred --------------------------------------------------------------------------CCCEEE
Confidence 133556
Q ss_pred EeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 251 VSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 251 v~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
+.++++ ++||+|+|.|+.. +++|+++++|||+++. |++|++++..|. ||+ ++.||+.+...|.
T Consensus 135 v~~~~n-----~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~~----~g~v~g~~~~~~~ 198 (444)
T PRK14583 135 IHLAHN-----QGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIANPR----TGAVTGNPRIRTR 198 (444)
T ss_pred EEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhCCC----eEEEEccceecCC
Confidence 655433 4599999999998 7899999999999998 999999998886 776 8999998777653
No 17
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.81 E-value=1.5e-18 Score=175.25 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=95.2
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR 169 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r 169 (345)
.+..|.|+|+||+|| |+ +.+.++|.++++++||.++++|+|+|||++|.|.+.+.+.. ++
T Consensus 45 ~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~----------~~------ 104 (439)
T TIGR03111 45 IGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ----------NE------ 104 (439)
T ss_pred cCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH----------Hh------
Confidence 366899999999999 88 68999999999999999999999999999999876554421 11
Q ss_pred CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635 170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV 249 (345)
Q Consensus 170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~ 249 (345)
.|++.
T Consensus 105 ---------------------------------------------------------------------------~~~v~ 109 (439)
T TIGR03111 105 ---------------------------------------------------------------------------FPGLS 109 (439)
T ss_pred ---------------------------------------------------------------------------CCCeE
Confidence 11222
Q ss_pred EEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCC
Q 041635 250 YVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKL 311 (345)
Q Consensus 250 yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~ 311 (345)
.+.-++ .++||+|+|.|++. ++|++|+++|+|+++. |++|++++..|. ||++
T Consensus 110 v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~~v 162 (439)
T TIGR03111 110 LRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNPDI 162 (439)
T ss_pred EEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCCCe
Confidence 221122 36799999999998 7899999999999997 999999999997 7873
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.79 E-value=5.3e-18 Score=168.93 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=105.3
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR 169 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r 169 (345)
....|.|+|+||+|| |+ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+. ++
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~----------~~------- 106 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRL----------AA------- 106 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHH----------HH-------
Confidence 456799999999999 87 57899999999999995 999999999999876544321 11
Q ss_pred CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635 170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV 249 (345)
Q Consensus 170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~ 249 (345)
..|++.
T Consensus 107 --------------------------------------------------------------------------~~~~v~ 112 (420)
T PRK11204 107 --------------------------------------------------------------------------QIPRLR 112 (420)
T ss_pred --------------------------------------------------------------------------hCCcEE
Confidence 124467
Q ss_pred EEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 250 YVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 250 yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
++.++++ ++||+|+|.|++. +++|+++++|+|.++. |++|.+++..|. ||+ ++.||+.....|.
T Consensus 113 ~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~~----v~~v~g~~~~~~~ 177 (420)
T PRK11204 113 VIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNPR----VGAVTGNPRIRNR 177 (420)
T ss_pred EEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----eEEEECCceeccc
Confidence 7776543 4599999999998 7899999999999998 999999999995 887 8999998877664
No 19
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.77 E-value=4.8e-18 Score=153.38 Aligned_cols=129 Identities=36% Similarity=0.532 Sum_probs=106.0
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|.|+|+||+|| |+.+.+++++.|+++++||.++++|+|+|||+++.|.+.+.+ ++.+
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~--------------~~~~------ 57 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE--------------LGVE------ 57 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH--------------hhcc------
Confidence 68999999999 887789999999999999999999999999999976543321 1100
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
.++.++.+
T Consensus 58 ------------------------------------------------------------------------~~~~~~~~ 65 (234)
T cd06421 58 ------------------------------------------------------------------------YGYRYLTR 65 (234)
T ss_pred ------------------------------------------------------------------------cCceEEEe
Confidence 01355555
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC-CCCCCcEEEEeCCceecCCCCC
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD-PKLSPSLAFVQFPQKFHNISSN 330 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D-p~~g~~va~VQtPQ~F~n~~~~ 330 (345)
++ +.++|+||+|.|++. +++++|+++|+|.++. |++|.+++..|.+ ++ ++.|++++.+.+.+..
T Consensus 66 ~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 66 PD----NRHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred CC----CCCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 43 457899999999998 7899999999999997 9999999999985 66 8999999999886543
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.76 E-value=1.5e-17 Score=151.83 Aligned_cols=129 Identities=28% Similarity=0.402 Sum_probs=104.0
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|+|+|+||+|| |+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+.. +++.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~----------~~~~-------- 57 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIV----------EEYA-------- 57 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHH----------HHHh--------
Confidence 67999999999 87 588999999999999999999999998 8888876665421 1100
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
..-++++++.+
T Consensus 58 ---------------------------------------------------------------------~~~~~i~~~~~ 68 (232)
T cd06437 58 ---------------------------------------------------------------------AQGVNIKHVRR 68 (232)
T ss_pred ---------------------------------------------------------------------hcCCceEEEEC
Confidence 00134667766
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
.++ .++|++|+|.|++. ++|++|+++|+|.++. |++|.+++.++.|++ +++||....+.|.
T Consensus 69 ~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~ 129 (232)
T cd06437 69 ADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADPK----LGFVQTRWGHINA 129 (232)
T ss_pred CCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCCC----eEEEecceeeEcC
Confidence 543 35699999999998 7999999999999997 999999888777887 8999998776664
No 21
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.73 E-value=2e-16 Score=156.48 Aligned_cols=127 Identities=19% Similarity=0.299 Sum_probs=100.6
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCC
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRC 170 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~ 170 (345)
...|.|+|+||+|| |+. .+.+++.|++++|||. ++|+|+||+++|.|.+.+.+.. +++
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~----------~~~------ 95 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR----------ADF------ 95 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH----------HhC------
Confidence 44799999999999 885 6899999999999997 9999999999998765443211 110
Q ss_pred CcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEE
Q 041635 171 PKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVY 250 (345)
Q Consensus 171 p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~y 250 (345)
|. .++.+
T Consensus 96 -----------------------------------------------------p~--------------------~~i~~ 102 (373)
T TIGR03472 96 -----------------------------------------------------PD--------------------ADIDL 102 (373)
T ss_pred -----------------------------------------------------CC--------------------CceEE
Confidence 00 12556
Q ss_pred EeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCce
Q 041635 251 VSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQK 323 (345)
Q Consensus 251 v~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~ 323 (345)
+...++.| .++|++|+|++++. ++||+++++|+|..+. |++|++++..|.||+ +++|+++..
T Consensus 103 v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~ 164 (373)
T TIGR03472 103 VIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYR 164 (373)
T ss_pred EECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEecccc
Confidence 65544333 45799999999987 8999999999999998 999999999998888 889988643
No 22
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.72 E-value=1e-16 Score=147.67 Aligned_cols=128 Identities=25% Similarity=0.307 Sum_probs=101.1
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|.|+|+||+|| |+ +.+.++|.|+++++||.++++|+|+|||++|.|.+.+.+ ++.+
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~--------------~~~~------ 56 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA--------------LRLP------ 56 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH--------------hccC------
Confidence 78999999999 88 689999999999999988999999999999988654432 1100
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
...+++++..
T Consensus 57 ----------------------------------------------------------------------~~~~i~~~~~ 66 (241)
T cd06427 57 ----------------------------------------------------------------------SIFRVVVVPP 66 (241)
T ss_pred ----------------------------------------------------------------------CCeeEEEecC
Confidence 0012344433
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
.+ ..+|++|+|.|+.. ++|++|+++|+|.++. |++|.+++.+|.+. ..++++||++..+.|.
T Consensus 67 ~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~ 128 (241)
T cd06427 67 SQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNA 128 (241)
T ss_pred CC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCC
Confidence 22 24699999999998 7999999999999998 99999999999721 1249999999877764
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.68 E-value=6.5e-16 Score=140.65 Aligned_cols=124 Identities=30% Similarity=0.467 Sum_probs=97.4
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHH-HHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLL-ALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~-~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
+|+||+|| |+++.+.+++.++++++||. ++|+|+|||+++.|.. .+.+ +|++++
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~----------~~~~~~---------- 55 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA----------HCAQLG---------- 55 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH----------HHHHhC----------
Confidence 58999999 98779999999999999997 8999999999998742 2211 222221
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccC
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREK 255 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 255 (345)
+++.++..++
T Consensus 56 ----------------------------------------------------------------------~~i~~i~~~~ 65 (236)
T cd06435 56 ----------------------------------------------------------------------ERFRFFHVEP 65 (236)
T ss_pred ----------------------------------------------------------------------CcEEEEEcCC
Confidence 1245555543
Q ss_pred CCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecC
Q 041635 256 RPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 256 ~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n 326 (345)
+.++|+||+|.|++.+. .++++|+++|+|..+. |++|.+++..|.+++ ++.||+++.+.+
T Consensus 66 ----~~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~ 125 (236)
T cd06435 66 ----LPGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRD 125 (236)
T ss_pred ----CCCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccC
Confidence 34569999999999843 4589999999999998 999999999987766 899999876654
No 24
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.67 E-value=2.1e-15 Score=149.84 Aligned_cols=126 Identities=26% Similarity=0.305 Sum_probs=94.5
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR 169 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r 169 (345)
++..|+|+|+||+|| |+ +.+.+++.++++++||. .++|+|+||||+|.|.+.+.+.. +++.
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~----------~~~~---- 96 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAA----------RAYG---- 96 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHH----------HhcC----
Confidence 467899999999999 88 58899999999999995 49999999999998865544321 1100
Q ss_pred CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635 170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV 249 (345)
Q Consensus 170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~ 249 (345)
.-+++.
T Consensus 97 --------------------------------------------------------------------------~~~~i~ 102 (384)
T TIGR03469 97 --------------------------------------------------------------------------RGDRLT 102 (384)
T ss_pred --------------------------------------------------------------------------CCCcEE
Confidence 012345
Q ss_pred EEeccCCCCCCCCChhhHHHHHHhhcccC-CCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635 250 YVSREKRPPHPHHFKAGALNCLLRVSSIL-SNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK 310 (345)
Q Consensus 250 yv~R~k~~g~~~~~KAGalN~~l~~s~~~-s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~ 310 (345)
++..+.++. .-.+|+.|+|.+++.+... .++|+++++|+|..++ |++|++++..+.+++
T Consensus 103 vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~ 162 (384)
T TIGR03469 103 VVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG 162 (384)
T ss_pred EecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC
Confidence 554433221 2468999999999983110 1199999999999998 999999999998655
No 25
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.65 E-value=8.8e-16 Score=141.04 Aligned_cols=127 Identities=20% Similarity=0.266 Sum_probs=102.7
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR 169 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r 169 (345)
....|.++|+||+|| |+ ..+.++|.++++++||.++++|+|+|||++|.|.+.+.+- +++
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~----------~~~------ 84 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREY----------ADK------ 84 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHH----------hhC------
Confidence 456799999999999 87 5789999999999999988999999999999876433321 000
Q ss_pred CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635 170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV 249 (345)
Q Consensus 170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~ 249 (345)
++.
T Consensus 85 -----------------------------------------------------------------------------~v~ 87 (251)
T cd06439 85 -----------------------------------------------------------------------------GVK 87 (251)
T ss_pred -----------------------------------------------------------------------------cEE
Confidence 134
Q ss_pred EEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 250 YVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 250 yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
++..+++ .+|++|+|.++.. +++++|+++|+|.++. |++|++++..+.+++ +++|++.....+.
T Consensus 88 ~i~~~~~-----~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~ 151 (251)
T cd06439 88 LLRFPER-----RGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIVDG 151 (251)
T ss_pred EEEcCCC-----CChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEecCC
Confidence 5544433 4599999999998 7889999999999998 999999999997776 7888887766554
No 26
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.63 E-value=3.2e-15 Score=133.65 Aligned_cols=122 Identities=12% Similarity=0.188 Sum_probs=94.3
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|.|+|+||+|| |+. .+.++|.|+++++||. ++|+|+|||+++.|.+.+.+. ++++.
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~----------~~~~~-------- 56 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKL----------IAKYP-------- 56 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHH----------HHHCC--------
Confidence 67999999999 875 5799999999999998 999999999999886544332 11111
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
. -++.++..
T Consensus 57 ---------------------------------------------------~--------------------~~~~~~~~ 65 (196)
T cd02520 57 ---------------------------------------------------N--------------------VDARLLIG 65 (196)
T ss_pred ---------------------------------------------------C--------------------CcEEEEec
Confidence 0 01334444
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCC
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFP 321 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtP 321 (345)
.++.| ..+|++|+|.|++. ++|++++++|+|..+. |++|.+++..|.+++ ++.|+..
T Consensus 66 ~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~ 122 (196)
T cd02520 66 GEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL 122 (196)
T ss_pred CCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee
Confidence 33222 24689999999998 7899999999999997 999999999988877 6777765
No 27
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.63 E-value=1.4e-14 Score=149.14 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=95.5
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAM-ALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR 169 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~l-aldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r 169 (345)
...|.|+|+||+|| |+ .++.++|.+++ ++|||. ++|+|+||++++.|.+.+.+.. ++
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~----------~~------ 120 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLA----------AR------ 120 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHH----------HH------
Confidence 45899999999999 98 58999999965 789975 9999999999998876665421 11
Q ss_pred CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635 170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV 249 (345)
Q Consensus 170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~ 249 (345)
.|+++
T Consensus 121 ---------------------------------------------------------------------------~p~v~ 125 (504)
T PRK14716 121 ---------------------------------------------------------------------------YPRVH 125 (504)
T ss_pred ---------------------------------------------------------------------------CCCeE
Confidence 23333
Q ss_pred EEeccCCCCCCCCChhhHHHHHHhhcc--cCCCC---CEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCcee
Q 041635 250 YVSREKRPPHPHHFKAGALNCLLRVSS--ILSNS---PYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKF 324 (345)
Q Consensus 250 yv~R~k~~g~~~~~KAGalN~~l~~s~--~~s~~---~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F 324 (345)
.+. .+++| ..+||+|||.+++... ....| ++++++|||.+++ |++|+....++.| .++||.|...
T Consensus 126 ~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~pv~~ 195 (504)
T PRK14716 126 LVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQLPVFS 195 (504)
T ss_pred EEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEecceec
Confidence 222 12233 3689999999997521 01234 9999999999998 9999876655433 4689999876
Q ss_pred cCC
Q 041635 325 HNI 327 (345)
Q Consensus 325 ~n~ 327 (345)
.+.
T Consensus 196 ~~~ 198 (504)
T PRK14716 196 LPR 198 (504)
T ss_pred cCC
Confidence 554
No 28
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.62 E-value=2.4e-16 Score=142.57 Aligned_cols=127 Identities=29% Similarity=0.341 Sum_probs=86.1
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|.|+|+||+|| |+. .+.++|.|+++++||. ++|+|+||++++.|.+.+.+ ++.+++
T Consensus 1 P~v~Vvip~~~---~~~-~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~----------~~~~~~-------- 56 (228)
T PF13641_consen 1 PRVSVVIPAYN---EDD-VLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRA----------LAARYP-------- 56 (228)
T ss_dssp --EEEE--BSS----HH-HHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHH----------HHHTTG--------
T ss_pred CEEEEEEEecC---CHH-HHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHH----------HHHHcC--------
Confidence 78999999999 885 8899999999999966 99999999999866433322 111111
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
--++.++.+
T Consensus 57 -----------------------------------------------------------------------~~~v~vi~~ 65 (228)
T PF13641_consen 57 -----------------------------------------------------------------------RVRVRVIRR 65 (228)
T ss_dssp -----------------------------------------------------------------------G-GEEEEE-
T ss_pred -----------------------------------------------------------------------CCceEEeec
Confidence 002466666
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecC
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n 326 (345)
.+++| ..+|++|+|.+++. +.+++|+++|+|.++. |++|++++.+|.+|+ +++||++..+.+
T Consensus 66 ~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~~----~~~v~~~~~~~~ 127 (228)
T PF13641_consen 66 PRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADPG----VGAVGGPVFPDN 127 (228)
T ss_dssp ---HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETT
T ss_pred CCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhCC----CCeEeeeEeecC
Confidence 54322 24799999999998 7899999999999997 999999999998887 999998886655
No 29
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.61 E-value=8.3e-15 Score=130.97 Aligned_cols=125 Identities=22% Similarity=0.178 Sum_probs=95.9
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ ..+.++|.++++++ |. ++|+|+|||++|.|.+.+. . . .
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~-~----------~-------------- 47 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-L-A----------I-------------- 47 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-h-e----------e--------------
Confidence 6899999 88 68999999999998 54 8999999999998764332 0 0 0
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+++.++.+....
T Consensus 48 ------------------------------------------------------------------~~~~v~~i~~~~~~ 61 (191)
T cd06436 48 ------------------------------------------------------------------TDSRVHLLRRHLPN 61 (191)
T ss_pred ------------------------------------------------------------------cCCcEEEEeccCCc
Confidence 01345666653211
Q ss_pred CCCCCChhhHHHHHHhhcc-------cCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCCC
Q 041635 258 PHPHHFKAGALNCLLRVSS-------ILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNIS 328 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~-------~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~ 328 (345)
.+.+|++|+|.+++.+. ....+++|+++|+|..+. |++|.+++.+|.||+ ++.||.+..+.|..
T Consensus 62 --~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 62 --ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred --CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 23569999999999741 011358999999999998 999999999888888 89999999988853
No 30
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.59 E-value=5.2e-14 Score=150.40 Aligned_cols=125 Identities=20% Similarity=0.311 Sum_probs=94.0
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCcc
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAM-ALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKT 168 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~l-aldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~ 168 (345)
++..|.|+|+||+|| |+ .++.+|+.+++ ++|||. ++|+|++|++++.|.+.+.+ +|+++
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~----------l~~~~---- 118 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDA----------VCARF---- 118 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHH----------HHHHC----
Confidence 466799999999999 99 59999999987 799998 99999988887777655543 22222
Q ss_pred CCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCce
Q 041635 169 RCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLL 248 (345)
Q Consensus 169 r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l 248 (345)
|++
T Consensus 119 -----------------------------------------------------------------------------p~~ 121 (727)
T PRK11234 119 -----------------------------------------------------------------------------PNV 121 (727)
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 222
Q ss_pred --EEEeccCCCCCCCCChhhHHHHHHhhccc-----CCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCC
Q 041635 249 --VYVSREKRPPHPHHFKAGALNCLLRVSSI-----LSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFP 321 (345)
Q Consensus 249 --~yv~R~k~~g~~~~~KAGalN~~l~~s~~-----~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtP 321 (345)
+.+.| +| .++||+|||.++...-. -...++++++|||.+++ |++|+ .+.++.++. ++||.|
T Consensus 122 ~~v~~~~---~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~~-----~~VQ~p 189 (727)
T PRK11234 122 HKVVCAR---PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVERK-----DLIQIP 189 (727)
T ss_pred EEEEeCC---CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCCC-----CeEeec
Confidence 33333 33 35799999999987310 02346788899999998 99997 677777654 899999
Q ss_pred ce
Q 041635 322 QK 323 (345)
Q Consensus 322 Q~ 323 (345)
..
T Consensus 190 ~~ 191 (727)
T PRK11234 190 VY 191 (727)
T ss_pred cc
Confidence 55
No 31
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.58 E-value=2e-14 Score=128.80 Aligned_cols=122 Identities=22% Similarity=0.250 Sum_probs=96.9
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ +.+.+||.|++.++||.++++|+|+|||+++.|.+.+... .+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~-----------~~~------------- 52 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFA-----------AAK------------- 52 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHH-----------HhC-------------
Confidence 6899999 87 6899999999999999989999999999999876544300 000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+++.++.++.
T Consensus 53 ------------------------------------------------------------------~~~~v~~~~~~~-- 64 (229)
T cd04192 53 ------------------------------------------------------------------PNFQLKILNNSR-- 64 (229)
T ss_pred ------------------------------------------------------------------CCcceEEeeccC--
Confidence 113455555442
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceec
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFH 325 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~ 325 (345)
+ ...+|+.++|.++.. +++++|+++|+|.++. |++|.+++..|.++. .+.|+.++.+.
T Consensus 65 ~-~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~ 122 (229)
T cd04192 65 V-SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYF 122 (229)
T ss_pred c-ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeec
Confidence 1 347799999999998 7899999999999998 999999999887665 67888887775
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.58 E-value=2.5e-14 Score=129.72 Aligned_cols=119 Identities=22% Similarity=0.217 Sum_probs=96.4
Q ss_pred eeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccc
Q 041635 95 AIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVY 174 (345)
Q Consensus 95 ~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~y 174 (345)
+|+|+||+|| |+.+.+.+++.++.+++ | .+|+|+|||+++.|.+.|.+..
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 4899999999 98679999999999998 3 6899999999997765442110
Q ss_pred ccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEecc
Q 041635 175 FSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSRE 254 (345)
Q Consensus 175 f~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 254 (345)
..+.+.++ .+
T Consensus 51 ---------------------------------------------------------------------~~~~~~v~-~~ 60 (235)
T cd06434 51 ---------------------------------------------------------------------KYGGIFVI-TV 60 (235)
T ss_pred ---------------------------------------------------------------------cCCcEEEE-ec
Confidence 00122333 33
Q ss_pred CCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 255 KRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 255 k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
+ +++|++|+|.|+.. +++++|+++|+|..+. |++|++++..|.+++ ++.|+..+.+.+.
T Consensus 61 ~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~ 119 (235)
T cd06434 61 P-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRP 119 (235)
T ss_pred C-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecC
Confidence 3 35599999999998 7999999999999998 999999999998877 9999999888775
No 33
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.57 E-value=2e-14 Score=126.99 Aligned_cols=121 Identities=21% Similarity=0.214 Sum_probs=91.4
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ +.+.++|.++++++||.++++|+|+|||++|.|.+.+. +++.
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~--------------~~~~----------- 51 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVAR--------------AAGA----------- 51 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHH--------------HcCC-----------
Confidence 6899999 88 68999999999999998889999999999997753321 1111
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
.++.+...
T Consensus 52 -----------------------------------------------------------------------~~~~~~~~- 59 (183)
T cd06438 52 -----------------------------------------------------------------------TVLERHDP- 59 (183)
T ss_pred -----------------------------------------------------------------------eEEEeCCC-
Confidence 11222211
Q ss_pred CCCCCChhhHHHHHHhhcc-cCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 258 PHPHHFKAGALNCLLRVSS-ILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~-~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
..++|++|+|.+++.+. .-+++++++++|+|.++. |++|.+++..|.+. ...||......+.
T Consensus 60 --~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~ 122 (183)
T cd06438 60 --ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNP 122 (183)
T ss_pred --CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCC
Confidence 24569999999998741 124699999999999998 99999999998742 2467877666553
No 34
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.52 E-value=2.6e-13 Score=119.98 Aligned_cols=122 Identities=18% Similarity=0.239 Sum_probs=94.8
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcc
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKV 173 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~ 173 (345)
|.|+|+||+|| |+.+.+.+|+.|++++.||. .+|+|+|||+++.|.+.+.+.. ..
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~---------~~----------- 55 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKY---------AA----------- 55 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHH---------Hh-----------
Confidence 67999999999 87557899999999999987 8999999999986554333210 00
Q ss_pred cccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEec
Q 041635 174 YFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSR 253 (345)
Q Consensus 174 yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R 253 (345)
..+++.++..
T Consensus 56 ----------------------------------------------------------------------~~~~~~~~~~ 65 (202)
T cd04184 56 ----------------------------------------------------------------------QDPRIKVVFR 65 (202)
T ss_pred ----------------------------------------------------------------------cCCCEEEEEc
Confidence 0123455554
Q ss_pred cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchh-cCCCCCCcEEEEeCCcee
Q 041635 254 EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFH-LDPKLSPSLAFVQFPQKF 324 (345)
Q Consensus 254 ~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f-~Dp~~g~~va~VQtPQ~F 324 (345)
+. .++++.|+|.|+.. +.+++++++|+|..+. |++|.+++..| .+|+ +++|++....
T Consensus 66 ~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~ 123 (202)
T cd04184 66 EE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDK 123 (202)
T ss_pred cc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHh
Confidence 43 35599999999998 7899999999999998 99999999988 5777 6677665544
No 35
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.51 E-value=5.4e-14 Score=130.79 Aligned_cols=52 Identities=21% Similarity=0.132 Sum_probs=44.2
Q ss_pred HHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 267 ALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 267 alN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
++|.++.. +++++|+++|||.++. |++|++++.+|. ||+ ++.||..+.-.|.
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~ 116 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGK 116 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCC
Confidence 45666654 7999999999999998 999999999995 888 8999998877664
No 36
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.51 E-value=3.3e-13 Score=119.53 Aligned_cols=121 Identities=21% Similarity=0.210 Sum_probs=92.5
Q ss_pred EEEeeccCCCCCC-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 97 DVFICTADPKKEP-PLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 97 dV~V~tynp~~Ep-~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
+|+||+|| |+ ++.+.+|+.|++++.||. .+|+|+|||+++.+...+.+. ++++
T Consensus 1 sviip~~n---~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~---------~~~~------------ 54 (201)
T cd04195 1 SVLMSVYI---KEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEE---------FKRK------------ 54 (201)
T ss_pred CEEEEccc---cchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHH---------HHhc------------
Confidence 58999999 54 468999999999999996 789999999954432222211 1111
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccC
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREK 255 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 255 (345)
.| +.++..++
T Consensus 55 ---------------------------------------------------------------------~~-i~~i~~~~ 64 (201)
T cd04195 55 ---------------------------------------------------------------------LP-LKVVPLEK 64 (201)
T ss_pred ---------------------------------------------------------------------CC-eEEEEcCc
Confidence 12 46676655
Q ss_pred CCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 256 RPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 256 ~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
+ .++++|+|.|+.. ++|++|+++|+|.++. |++|.+++.+|. +|+ +++|.+.....+.
T Consensus 65 n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~ 123 (201)
T cd04195 65 N-----RGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDS 123 (201)
T ss_pred c-----ccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECC
Confidence 4 4599999999998 7899999999999998 999999999986 666 7888887665544
No 37
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.50 E-value=4.3e-13 Score=118.98 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=93.4
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccccc
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFS 176 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~ 176 (345)
+|+||||| |+ ..+.++|.|++++.|| .++|+|+|||++|.|.+.+.+. +++++
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~----------~~~~~----------- 53 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEY----------IDKDP----------- 53 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHH----------HhcCC-----------
Confidence 58999999 88 5789999999999999 4999999999999887555431 11111
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCC
Q 041635 177 NLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKR 256 (345)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~ 256 (345)
+.++++..++
T Consensus 54 ---------------------------------------------------------------------~~~~~~~~~~- 63 (214)
T cd04196 54 ---------------------------------------------------------------------FIIILIRNGK- 63 (214)
T ss_pred ---------------------------------------------------------------------ceEEEEeCCC-
Confidence 1234444443
Q ss_pred CCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecC
Q 041635 257 PPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 257 ~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n 326 (345)
.+++++|+|.|+.. ++|++|+++|+|.++. |+.|.+++..+. ++. .+++.+...+.+
T Consensus 64 ----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~ 121 (214)
T cd04196 64 ----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVD 121 (214)
T ss_pred ----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEEC
Confidence 35699999999987 8999999999999998 999999999854 665 677887766544
No 38
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.45 E-value=1.5e-12 Score=118.09 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=91.5
Q ss_pred eeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccc
Q 041635 95 AIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVY 174 (345)
Q Consensus 95 ~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~y 174 (345)
.++|+||+|| |+ +.+.+++.++++++||....+|+|+|||+++.|.+.+.+.. .
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------~------------ 54 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------A------------ 54 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH----------h------------
Confidence 3899999999 87 47899999999999997789999999999997754333210 0
Q ss_pred ccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEecc
Q 041635 175 FSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSRE 254 (345)
Q Consensus 175 f~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 254 (345)
..|.+.++..+
T Consensus 55 ---------------------------------------------------------------------~~~~v~~i~~~ 65 (249)
T cd02525 55 ---------------------------------------------------------------------KDPRIRLIDNP 65 (249)
T ss_pred ---------------------------------------------------------------------cCCeEEEEeCC
Confidence 12345666432
Q ss_pred CCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCC
Q 041635 255 KRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFP 321 (345)
Q Consensus 255 k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtP 321 (345)
.+++++|+|.|+.. +++++++++|+|.++. |++|.+++..+.+++ ...|+.+
T Consensus 66 ------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~ 117 (249)
T cd02525 66 ------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGP 117 (249)
T ss_pred ------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecc
Confidence 23589999999998 7899999999999997 999999998887765 4455544
No 39
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.44 E-value=1.9e-12 Score=119.79 Aligned_cols=124 Identities=13% Similarity=0.117 Sum_probs=87.9
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCC
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRC 170 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~ 170 (345)
...|.|+|+||+|| |.. .+..++.++.........++|+|+||||+|.|.+.+.+. +++++
T Consensus 6 ~~~~~vsVvIp~yn---e~~-~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~----------~~~~~----- 66 (243)
T PLN02726 6 EGAMKYSIIVPTYN---ERL-NIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQL----------QKVYG----- 66 (243)
T ss_pred CCCceEEEEEccCC---chh-hHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHH----------HHhcC-----
Confidence 34589999999999 874 556666665443222225999999999999887554331 11111
Q ss_pred CcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEE
Q 041635 171 PKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVY 250 (345)
Q Consensus 171 p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~y 250 (345)
-+++.+
T Consensus 67 --------------------------------------------------------------------------~~~v~~ 72 (243)
T PLN02726 67 --------------------------------------------------------------------------EDRILL 72 (243)
T ss_pred --------------------------------------------------------------------------CCcEEE
Confidence 023455
Q ss_pred EeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCC
Q 041635 251 VSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFP 321 (345)
Q Consensus 251 v~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtP 321 (345)
+.++++ .+|++|+|.|+.. +.|++++++|+|.... |++|.+++..+.+++ ..+|...
T Consensus 73 ~~~~~n-----~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~ 129 (243)
T PLN02726 73 RPRPGK-----LGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETG----ADIVTGT 129 (243)
T ss_pred EecCCC-----CCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcC----CcEEEEc
Confidence 555443 4599999999998 7899999999999997 999999999887544 3445443
No 40
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.39 E-value=5.6e-12 Score=123.19 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=88.6
Q ss_pred CCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCc
Q 041635 93 LPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPK 172 (345)
Q Consensus 93 ~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~ 172 (345)
.|.|+|+||+|| ++ ..+.+++.|++++.|+. ++|+|+||||+|.|.+.+.+- ++
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~----------~~---------- 58 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHY----------AE---------- 58 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHH----------Hh----------
Confidence 488999999999 77 58899999999999986 999999999999876444321 11
Q ss_pred ccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEe
Q 041635 173 VYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVS 252 (345)
Q Consensus 173 ~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~ 252 (345)
..|++.++.
T Consensus 59 -----------------------------------------------------------------------~~~~i~vi~ 67 (328)
T PRK10073 59 -----------------------------------------------------------------------NYPHVRLLH 67 (328)
T ss_pred -----------------------------------------------------------------------hCCCEEEEE
Confidence 124456665
Q ss_pred ccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCC
Q 041635 253 REKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDP 309 (345)
Q Consensus 253 R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp 309 (345)
. + +++.++|.|.||.. ++|++|+++|+|..+. |+.+.+.+..+.+.
T Consensus 68 ~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 68 Q-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred C-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 3 2 35699999999998 8999999999999998 99999999877643
No 41
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.39 E-value=6.8e-12 Score=120.31 Aligned_cols=109 Identities=17% Similarity=0.287 Sum_probs=86.1
Q ss_pred CCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCC
Q 041635 92 NLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCP 171 (345)
Q Consensus 92 ~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p 171 (345)
..|.|+|+||||| ++. .+.++|.|++++.||. ++|+|+||||++ .+.+.+ +++++
T Consensus 3 ~~p~VSVIip~yN---~~~-~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~----------~~~~~------- 57 (279)
T PRK10018 3 DNPLISIYMPTWN---RQQ-LAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQ----------YVTAL------- 57 (279)
T ss_pred CCCEEEEEEEeCC---CHH-HHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHH----------HHHHc-------
Confidence 3589999999999 874 6789999999999997 999999999984 222221 11111
Q ss_pred cccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEE
Q 041635 172 KVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYV 251 (345)
Q Consensus 172 ~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv 251 (345)
.-|++.|+
T Consensus 58 ------------------------------------------------------------------------~~~ri~~i 65 (279)
T PRK10018 58 ------------------------------------------------------------------------NDPRITYI 65 (279)
T ss_pred ------------------------------------------------------------------------CCCCEEEE
Confidence 11457788
Q ss_pred eccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 252 SREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 252 ~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
..+++ .++++|+|.||.. ++|++|+++|+|.... |+.|.+.+.++.
T Consensus 66 ~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 66 HNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred ECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 76543 5599999999998 8999999999999998 999998888664
No 42
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.38 E-value=1.6e-11 Score=120.39 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=86.3
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcC------CCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHh
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMAL------DYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRF 164 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~lal------dYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~ 164 (345)
...|.|+|+||+|| |+. .+..++.++.+. +.|...++|+|+||||+|.|.+.+.+ +++++
T Consensus 67 ~~~~~isVVIP~yN---e~~-~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~----------~~~~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EED-RLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKD----------FWRQN 132 (333)
T ss_pred CCCeEEEEEEeeCC---CHH-HHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHH----------HHHhc
Confidence 45689999999999 874 678888877653 34555699999999999998755433 11111
Q ss_pred CCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccc
Q 041635 165 GIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVE 244 (345)
Q Consensus 165 ~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (345)
.- .
T Consensus 133 ~~-----------------------------------------------------------------------------~ 135 (333)
T PTZ00260 133 IN-----------------------------------------------------------------------------P 135 (333)
T ss_pred CC-----------------------------------------------------------------------------C
Confidence 00 0
Q ss_pred cCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC
Q 041635 245 MPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 245 ~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D 308 (345)
-+++.++..+++ .+|++|+|.|++. +.|++|+++|+|.... |+.+.+++..+.+
T Consensus 136 ~~~i~vi~~~~N-----~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~ 189 (333)
T PTZ00260 136 NIDIRLLSLLRN-----KGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLK 189 (333)
T ss_pred CCcEEEEEcCCC-----CChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHH
Confidence 012455655443 4599999999998 7899999999999997 9999888887764
No 43
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.36 E-value=1.5e-11 Score=103.07 Aligned_cols=119 Identities=30% Similarity=0.389 Sum_probs=88.6
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ +.+.+++.+++++.|+. .+|+|+|||+++.|.+.+.+.. .+
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~----------~~-------------- 50 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA----------AL-------------- 50 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh----------cc--------------
Confidence 6799999 88 68999999999999965 8999999999997754433210 00
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+.++++..+++
T Consensus 51 ------------------------------------------------------------------~~~~~~~~~~~~~- 63 (180)
T cd06423 51 ------------------------------------------------------------------YIRRVLVVRDKEN- 63 (180)
T ss_pred ------------------------------------------------------------------ccceEEEEEeccc-
Confidence 0012355555543
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n 326 (345)
.+|++|+|.+++. +++++++++|+|..+. |++|.+++..+. +++ ++.|.......+
T Consensus 64 ----~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~ 120 (180)
T cd06423 64 ----GGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRN 120 (180)
T ss_pred ----CCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEec
Confidence 4599999999998 6999999999999998 999999955454 666 566655544433
No 44
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.36 E-value=2e-12 Score=108.60 Aligned_cols=105 Identities=21% Similarity=0.188 Sum_probs=82.1
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccccc
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFS 176 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~ 176 (345)
+|+||+|| |+ +.+.+++.|++.+.++. .+|+|+|||+++.|.+.+.+..+
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 68999999 75 58899999999995555 99999999999987654433210
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCC
Q 041635 177 NLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKR 256 (345)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~ 256 (345)
..+++.|+.++++
T Consensus 51 -------------------------------------------------------------------~~~~i~~i~~~~n 63 (169)
T PF00535_consen 51 -------------------------------------------------------------------SDPNIRYIRNPEN 63 (169)
T ss_dssp -------------------------------------------------------------------CSTTEEEEEHCCC
T ss_pred -------------------------------------------------------------------ccccccccccccc
Confidence 1234788888753
Q ss_pred CCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC
Q 041635 257 PPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 257 ~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D 308 (345)
.++++|+|.|+.. +.+++++++|+|.++. |++|.+++..+.+
T Consensus 64 -----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 64 -----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEK 105 (169)
T ss_dssp -----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHH
T ss_pred -----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHh
Confidence 3699999999998 8899999999999998 8999999999986
No 45
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.35 E-value=9.3e-12 Score=111.81 Aligned_cols=114 Identities=17% Similarity=0.140 Sum_probs=86.6
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ ..+.+++.++.++.| ....+|+|+|||+++.|.+.+.+- .+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~----------~~--------------- 50 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVREL----------AK--------------- 50 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHH----------HH---------------
Confidence 6899999 87 478999999999998 234999999999999875433210 01
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+++.++..+++
T Consensus 51 ------------------------------------------------------------------~~~~i~~~~~~~n- 63 (224)
T cd06442 51 ------------------------------------------------------------------EYPRVRLIVRPGK- 63 (224)
T ss_pred ------------------------------------------------------------------hCCceEEEecCCC-
Confidence 0123455555544
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFP 321 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtP 321 (345)
.++++|+|.|+.. +.|++|+++|+|..+. |++|.+.+..+.+++ ...|..+
T Consensus 64 ----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~ 114 (224)
T cd06442 64 ----RGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG----ADLVIGS 114 (224)
T ss_pred ----CChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC----CCEEEEe
Confidence 4599999999998 7899999999999997 999999999877655 3445444
No 46
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.35 E-value=1.4e-11 Score=107.34 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=89.4
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccccc
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFS 176 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~ 176 (345)
+|+||+|| ++ +.+.+++.+++++.||. ++|+|+|||+++.|.+.+.+. .-
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~--------------~~---------- 50 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY--------------ED---------- 50 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------Hh----------
Confidence 48999999 87 68899999999999987 899999999999775443221 00
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCC
Q 041635 177 NLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKR 256 (345)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~ 256 (345)
.++++..+++
T Consensus 51 ----------------------------------------------------------------------~~~~~~~~~~ 60 (202)
T cd06433 51 ----------------------------------------------------------------------KITYWISEPD 60 (202)
T ss_pred ----------------------------------------------------------------------hcEEEEecCC
Confidence 0133434433
Q ss_pred CCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCC
Q 041635 257 PPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 257 ~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~ 327 (345)
.++++|+|.|++. +++++|+++|+|.++. |+.+.+++..+. +++ ..+|.....+.+.
T Consensus 61 -----~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~ 118 (202)
T cd06433 61 -----KGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDE 118 (202)
T ss_pred -----cCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcC
Confidence 4599999999998 7899999999999998 899999995554 666 5667666655443
No 47
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.34 E-value=2.5e-11 Score=129.20 Aligned_cols=122 Identities=18% Similarity=0.276 Sum_probs=85.8
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCChhhHHHHHHHHhhhccchhHHHHhC
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAM-ALDYPSKKLHVYL---SDDAGSALTLLALRQACAFASSWLPFCRRFG 165 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~l-aldYP~~kl~V~v---~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~ 165 (345)
+.+.|.|+|+||+|| |+ +++.++|.+++ ++|||. ++|+| .|||.+. .++.+..
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~---~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETI---TEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHH---HHHHHHh--------------
Confidence 456799999999999 98 69999999987 899996 89999 5777544 2332210
Q ss_pred CccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhccccc
Q 041635 166 IKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEM 245 (345)
Q Consensus 166 v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 245 (345)
..+
T Consensus 124 -----------------------------------------------------------------------------~~~ 126 (703)
T PRK15489 124 -----------------------------------------------------------------------------RRY 126 (703)
T ss_pred -----------------------------------------------------------------------------ccC
Confidence 012
Q ss_pred CceEEEeccCCCCCCCCChhhHHHHHHhhc---ccCCCCCE--EEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeC
Q 041635 246 PLLVYVSREKRPPHPHHFKAGALNCLLRVS---SILSNSPY--ILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQF 320 (345)
Q Consensus 246 P~l~yv~R~k~~g~~~~~KAGalN~~l~~s---~~~s~~~~--i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQt 320 (345)
|++..|..+. . ...+||.|||.++... .....++| |+++|||.+++ |++|+. +-+|.+.. .+||.
T Consensus 127 p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~-~~~~~~~~-----~~iQ~ 196 (703)
T PRK15489 127 KRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKY-FNYLLPRK-----DLVQL 196 (703)
T ss_pred CcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHH-HHhhcCCc-----ceeee
Confidence 4445554432 1 2467999999999863 11123444 99999999998 999975 46666332 46997
Q ss_pred C
Q 041635 321 P 321 (345)
Q Consensus 321 P 321 (345)
|
T Consensus 197 p 197 (703)
T PRK15489 197 P 197 (703)
T ss_pred e
Confidence 7
No 48
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.33 E-value=1.4e-11 Score=117.51 Aligned_cols=112 Identities=19% Similarity=0.119 Sum_probs=89.4
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccccc
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFS 176 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~ 176 (345)
+|+||+|| |+.+.+.++|.|+++..+|....+|+|+||||++.|.+.+.+.. +.
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~---------~~-------------- 54 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY---------YK-------------- 54 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH---------Hh--------------
Confidence 58999999 88678999999999999987667999999999998765443200 00
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCC
Q 041635 177 NLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKR 256 (345)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~ 256 (345)
...|++.++..+++
T Consensus 55 ------------------------------------------------------------------~~~~~v~vi~~~~n 68 (299)
T cd02510 55 ------------------------------------------------------------------KYLPKVKVLRLKKR 68 (299)
T ss_pred ------------------------------------------------------------------hcCCcEEEEEcCCC
Confidence 01245677766543
Q ss_pred CCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCC
Q 041635 257 PPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPK 310 (345)
Q Consensus 257 ~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~ 310 (345)
.++++|.|.|++. ++|++|+++|+|..+. |++|.+++..+. +|.
T Consensus 69 -----~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~~ 113 (299)
T cd02510 69 -----EGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAENRK 113 (299)
T ss_pred -----CCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHhCCC
Confidence 4599999999998 8999999999999997 999999999887 444
No 49
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.32 E-value=1.5e-11 Score=107.12 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=92.4
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ ..+.+++.++..+.|+....+|+|+|||+++.|.+.+.+.. .
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~----------~--------------- 51 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA----------A--------------- 51 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH----------H---------------
Confidence 6799999 87 57899999999999865569999999999997765443210 0
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+.++++..+++.
T Consensus 52 ------------------------------------------------------------------~~~~~~~~~~~~n~ 65 (185)
T cd04179 52 ------------------------------------------------------------------RVPRVRVIRLSRNF 65 (185)
T ss_pred ------------------------------------------------------------------hCCCeEEEEccCCC
Confidence 11234556555544
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n 326 (345)
+|++|+|.++.. +.|++++++|+|..+. |++|.+++..+.... ..+|+.+....+
T Consensus 66 -----G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~ 120 (185)
T cd04179 66 -----GKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEGG----ADVVIGSRFVRG 120 (185)
T ss_pred -----CccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeecCC
Confidence 499999999998 7899999999999997 999999999866444 466777765544
No 50
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.32 E-value=4e-11 Score=104.33 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=81.3
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ +.+.+||.|++++.|+. .+|+|+|||+++.|.+.+.+.. ++..
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~----------~~~~------------ 52 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK----------SQFP------------ 52 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH----------hhcC------------
Confidence 6799999 88 57899999999999886 7999999999997754333210 0000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
. +++++.++.
T Consensus 53 -------------------------------------------------------------------~-~~~~~~~~~-- 62 (182)
T cd06420 53 -------------------------------------------------------------------I-PIKHVWQED-- 62 (182)
T ss_pred -------------------------------------------------------------------C-ceEEEEcCC--
Confidence 0 123444432
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK 310 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~ 310 (345)
...++++++|.|++. ++|++|+++|+|.++. |++|.+++..+ ++.
T Consensus 63 --~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~~ 107 (182)
T cd06420 63 --EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EPG 107 (182)
T ss_pred --cchhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CCC
Confidence 224699999999998 7899999999999998 99999999877 444
No 51
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.31 E-value=1.2e-11 Score=119.94 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=87.8
Q ss_pred CCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCC
Q 041635 92 NLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCP 171 (345)
Q Consensus 92 ~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p 171 (345)
.-|.|+|+||+|| |+ ..+.++|.++.++.+.....+|+|+||||+|.|.+.+.+ ++....
T Consensus 29 ~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~~v~-- 88 (306)
T PRK13915 29 AGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGARVV-- 88 (306)
T ss_pred CCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcchhh--
Confidence 4589999999999 88 478999999988755222469999999999988644332 221000
Q ss_pred cccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEE
Q 041635 172 KVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYV 251 (345)
Q Consensus 172 ~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv 251 (345)
+....+
T Consensus 89 --------------------------------------------------------------------------~~~~~~ 94 (306)
T PRK13915 89 --------------------------------------------------------------------------SREEIL 94 (306)
T ss_pred --------------------------------------------------------------------------cchhhh
Confidence 000000
Q ss_pred ec-cCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCC-CCChHHHHHHhchhc-CCCCCCcEEEEeC
Q 041635 252 SR-EKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMF-CNDPTSAKQAMCFHL-DPKLSPSLAFVQF 320 (345)
Q Consensus 252 ~R-~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~-~~~p~~L~~~v~~f~-Dp~~g~~va~VQt 320 (345)
.+ + ..++|++|+|.++.. ++|++|+++|+|.. ++ |++|.+++..+. +|+ +++|..
T Consensus 95 ~~~~-----~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 95 PELP-----PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hccc-----cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCCC----ceEEEE
Confidence 11 1 235699999999987 78999999999997 66 999999999887 777 566654
No 52
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.27 E-value=6.7e-11 Score=106.96 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=83.0
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| ++ ..+.++|.|++++.|| +.++|+|+|||+++.|.+.+.+ +++++.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~----------~~~~~~------------ 53 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEK----------WRKKLE------------ 53 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHH----------HHHhCc------------
Confidence 6899999 76 5899999999999998 3599999999999988644432 111111
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
.++++++..+.+.
T Consensus 54 -------------------------------------------------------------------~~~~~~~~~~~~~ 66 (219)
T cd06913 54 -------------------------------------------------------------------DSGVIVLVGSHNS 66 (219)
T ss_pred -------------------------------------------------------------------ccCeEEEEecccC
Confidence 1224555443221
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
+ ...+.+.|.|.|++. ++|++++++|+|.++. |+.+.+.+..+.
T Consensus 67 ~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~ 110 (219)
T cd06913 67 P-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAAL 110 (219)
T ss_pred C-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHH
Confidence 1 246789999999998 8999999999999998 899998877775
No 53
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.25 E-value=3.7e-11 Score=108.07 Aligned_cols=108 Identities=20% Similarity=0.177 Sum_probs=82.0
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCC--CCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDY--PSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldY--P~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
|+||+|| |+ ..+.+++.+++++.+ +....+|+|+|||++|.|.+.+.+ +++++
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~----------~~~~~----------- 55 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARK----------LARKN----------- 55 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHH----------HHHhC-----------
Confidence 6899999 87 578999999988755 444599999999999987654432 11111
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCc-eEEEecc
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPL-LVYVSRE 254 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~-l~yv~R~ 254 (345)
|. ++++..+
T Consensus 56 ----------------------------------------------------------------------~~~i~~i~~~ 65 (211)
T cd04188 56 ----------------------------------------------------------------------PALIRVLTLP 65 (211)
T ss_pred ----------------------------------------------------------------------CCcEEEEEcc
Confidence 11 2455544
Q ss_pred CCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635 255 KRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK 310 (345)
Q Consensus 255 k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~ 310 (345)
++ .+|++|+|.|++. +.|++|+++|+|.... |+.+.+++..+.++.
T Consensus 66 ~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 66 KN-----RGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred cC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 43 3499999999998 7899999999999998 999999999866443
No 54
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.25 E-value=5e-11 Score=105.99 Aligned_cols=108 Identities=17% Similarity=0.155 Sum_probs=83.5
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||||| |+ ..+.+++.|++++.||. .+|+|+|||+++.|...+.+ ++.
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~--------------~~~----------- 49 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTS--------------LGD----------- 49 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHH--------------hcC-----------
Confidence 6899999 87 58899999999999996 68999999999977543322 110
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
..+ +.++.-+++
T Consensus 50 ------------------------------------------------------------------~~~-i~~~~~~~n- 61 (202)
T cd04185 50 ------------------------------------------------------------------LDN-IVYLRLPEN- 61 (202)
T ss_pred ------------------------------------------------------------------CCc-eEEEECccc-
Confidence 011 355555443
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK 310 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~ 310 (345)
.+.++++|.|+..+- .+++++++++|+|.++. |++|++++..+.+++
T Consensus 62 ----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~ 108 (202)
T cd04185 62 ----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN 108 (202)
T ss_pred ----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC
Confidence 448889999988642 35799999999999998 999999999888776
No 55
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.24 E-value=1.1e-10 Score=98.90 Aligned_cols=109 Identities=19% Similarity=0.243 Sum_probs=85.0
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||+|| |+ ..+.+++.++.++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~~~---~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVNYN---SL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEecC---CH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 6899999 85 68999999999999955 8999999999987654443210
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
+++.++..++
T Consensus 49 --------------------------------------------------------------------~~~~~~~~~~-- 58 (166)
T cd04186 49 --------------------------------------------------------------------PEVRLIRNGE-- 58 (166)
T ss_pred --------------------------------------------------------------------CCeEEEecCC--
Confidence 1234555443
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQF 320 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQt 320 (345)
..++++|+|.++.. +++++++++|+|..+. |+++.+.+..+. +++ +++++.
T Consensus 59 ---~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~~~~ 110 (166)
T cd04186 59 ---NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQDPD----VGIVGP 110 (166)
T ss_pred ---CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhCCC----ceEEEc
Confidence 35599999999998 6899999999999998 899999998766 555 555553
No 56
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.23 E-value=9.7e-11 Score=110.10 Aligned_cols=50 Identities=16% Similarity=0.062 Sum_probs=40.2
Q ss_pred CeeEEEeeccCCCCCChHHHHHHHHHHHcC-CCCCCceEEEEEcCCCChhhHHHH
Q 041635 94 PAIDVFICTADPKKEPPLEVMNTVLSAMAL-DYPSKKLHVYLSDDAGSALTLLAL 147 (345)
Q Consensus 94 P~VdV~V~tynp~~Ep~~~v~~tv~s~lal-dYP~~kl~V~v~DDg~s~~t~~~l 147 (345)
|.|+|+||||| |+ +.+.+|+.|+.++ +.+...++|+|+||||+|.|.+.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~ 51 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFL 51 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHH
Confidence 67999999999 86 5789999999864 222234999999999999886544
No 57
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.21 E-value=1.8e-10 Score=103.31 Aligned_cols=101 Identities=17% Similarity=0.150 Sum_probs=79.4
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccc
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYF 175 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf 175 (345)
|+|+||+|| |+. .+.++|.|++++.|+. .+|+|+|||+++.|.+.+.+
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 689999999 874 7899999999999854 89999999999976432211
Q ss_pred cCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccC
Q 041635 176 SNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREK 255 (345)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 255 (345)
+.++++..
T Consensus 49 ----------------------------------------------------------------------~~~~~~~~-- 56 (221)
T cd02522 49 ----------------------------------------------------------------------AGVVVISS-- 56 (221)
T ss_pred ----------------------------------------------------------------------CCeEEEeC--
Confidence 11344432
Q ss_pred CCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635 256 RPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK 310 (345)
Q Consensus 256 ~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~ 310 (345)
+ .+|++++|.|+.. +++++|+++|+|..+. |+++.+++..+.++.
T Consensus 57 ~-----~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~ 101 (221)
T cd02522 57 P-----KGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG 101 (221)
T ss_pred C-----cCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC
Confidence 1 3489999999988 7799999999999998 999999876665443
No 58
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.16 E-value=5.7e-09 Score=106.43 Aligned_cols=222 Identities=18% Similarity=0.193 Sum_probs=135.3
Q ss_pred CCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCCh--hHHHHHHH-HHHHHHHHHHHH---HHHhhhcc
Q 041635 4 LPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLAS--LPAQLLVF-ALELLLSLLWLL---NQAYLWNP 76 (345)
Q Consensus 4 ~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~--~~~w~~~~-~~E~~~~~~~~l---~~~~~~~p 76 (345)
.|-....+.+.+. .+.|++.++..++....=.|-....++..+.. ...=+.+| +.-+|.+.++.. +.+.....
T Consensus 48 ~pr~~~~~~~~~vg~lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~ 127 (736)
T COG2943 48 APRYLAQLTGRTVGTLRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFG 127 (736)
T ss_pred CCchhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeec
Confidence 3444555555333 37788877777777666666666666654431 11112222 122333322221 22222111
Q ss_pred cccCCCCC-CCCcCCCCCCeeEEEeeccCCCCCChHHHHHHHHH----HHcCCCCCCceEEEEEcCCCChhhHHHHHHHH
Q 041635 77 VSRRVFPE-RLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLS----AMALDYPSKKLHVYLSDDAGSALTLLALRQAC 151 (345)
Q Consensus 77 ~~r~~~~~-~l~~~~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s----~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~ 151 (345)
..|..-.+ +-| -..+-+-.|++|+|| |++.-|..-+++ +-+.. -.+++.++|+.|.++++- ++.|..
T Consensus 128 ~~r~~~~~p~~p--~p~~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq~ 199 (736)
T COG2943 128 RDRYLSIAPNEP--LPDLHRTAILMPIYN---EDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQK 199 (736)
T ss_pred CCCcCCCCCCCC--CCcccceeEEeeccc---cCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHHH
Confidence 11111000 001 123345789999999 998766544443 32222 235799999999999853 555543
Q ss_pred hhhccchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEee
Q 041635 152 AFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVII 231 (345)
Q Consensus 152 ~~a~~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~ 231 (345)
-|..+|++.+-+
T Consensus 200 ----a~~~l~~e~~g~---------------------------------------------------------------- 211 (736)
T COG2943 200 ----AWAELCRELGGE---------------------------------------------------------------- 211 (736)
T ss_pred ----HHHHHHHHhCCC----------------------------------------------------------------
Confidence 455688765521
Q ss_pred cCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCC
Q 041635 232 DKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPK 310 (345)
Q Consensus 232 ~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~ 310 (345)
-+ +|..|.++ |.+.||||+-.-.+.-| +..++++++|||++.. ++.+-+++..+. +|+
T Consensus 212 --------------~~-ifYRrRr~---n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~ 270 (736)
T COG2943 212 --------------GN-IFYRRRRR---NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD 270 (736)
T ss_pred --------------Cc-eeeehHhh---hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC
Confidence 11 45544332 56789999999999977 8889999999999998 999999999998 888
Q ss_pred CCCcEEEEeCCceecC
Q 041635 311 LSPSLAFVQFPQKFHN 326 (345)
Q Consensus 311 ~g~~va~VQtPQ~F~n 326 (345)
.|++||--.-.|
T Consensus 271 ----aGlIQt~P~~~g 282 (736)
T COG2943 271 ----AGLIQTSPKASG 282 (736)
T ss_pred ----CceeecchhhcC
Confidence 899999655444
No 59
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.13 E-value=6.7e-10 Score=97.20 Aligned_cols=50 Identities=12% Similarity=0.110 Sum_probs=41.8
Q ss_pred ceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchh
Q 041635 247 LLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFH 306 (345)
Q Consensus 247 ~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f 306 (345)
++.++..+++ .+|++|+|.+++. +.+++|+++|+|..+. |++|.+++..+
T Consensus 56 ~i~~i~~~~n-----~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~ 105 (181)
T cd04187 56 RVKVIRLSRN-----FGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW 105 (181)
T ss_pred CEEEEEecCC-----CCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH
Confidence 4566655443 4599999999998 7899999999999997 99999999874
No 60
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.13 E-value=5.4e-10 Score=109.23 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=37.5
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
.+|++|+|+|+.. ++|++++++|||.... |+.+.+.+..+.
T Consensus 76 ~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 76 YGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred CCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 4699999999998 7999999999999987 999999998875
No 61
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=1.1e-09 Score=90.81 Aligned_cols=50 Identities=20% Similarity=0.230 Sum_probs=44.3
Q ss_pred CCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHH
Q 041635 93 LPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALR 148 (345)
Q Consensus 93 ~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ 148 (345)
.|.++|+||||| |+ ..+.++|.|++.+.|+. .+|+|+|||++|.|.+.+.
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~ 51 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAI 51 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHH
Confidence 478999999999 77 68999999999999998 7899999999998865443
No 62
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.99 E-value=5.7e-09 Score=95.94 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=37.9
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D 308 (345)
.+.+++.|.|+.. +.+++|+++|+|..+. |+.+.+++..+.+
T Consensus 57 ~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~ 98 (229)
T cd02511 57 DGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLAT 98 (229)
T ss_pred CChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhC
Confidence 4589999999998 7899999999999998 9999999998874
No 63
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.98 E-value=1.1e-08 Score=83.44 Aligned_cols=113 Identities=28% Similarity=0.321 Sum_probs=84.0
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCcccccC
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSN 177 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~yf~~ 177 (345)
|+||++| |+ ..+..|+.+++..+|+. .+|+|+||++++.+.+.+.+..+ .
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~----------~-------------- 50 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK----------K-------------- 50 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh----------c--------------
Confidence 5799999 76 58899999999999955 88999999999876544433210 0
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEeccCCC
Q 041635 178 LNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRP 257 (345)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~ 257 (345)
.....++...+
T Consensus 51 -------------------------------------------------------------------~~~~~~~~~~~-- 61 (156)
T cd00761 51 -------------------------------------------------------------------DPRVIRVINEE-- 61 (156)
T ss_pred -------------------------------------------------------------------CCCeEEEEecC--
Confidence 01123444433
Q ss_pred CCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCC
Q 041635 258 PHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFP 321 (345)
Q Consensus 258 g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtP 321 (345)
+.+|++++|.++.. .++++++++|+|..+. |+++...+..+. +++ .++|+++
T Consensus 62 ---~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 ---NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred ---CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCCC----ceEEecc
Confidence 35699999999998 6899999999999997 899988744444 555 6777766
No 64
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.95 E-value=5.3e-09 Score=94.88 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=38.5
Q ss_pred eEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHh
Q 041635 248 LVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAM 303 (345)
Q Consensus 248 l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v 303 (345)
+.++..+++. ++++|+|.|+..+.. .++++++++|+|..+. |++|.+++
T Consensus 49 i~~i~~~~n~-----G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~ 97 (237)
T cd02526 49 IELIHLGENL-----GIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLL 97 (237)
T ss_pred EEEEECCCce-----ehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHH
Confidence 5667665543 499999999998310 1459999999999998 99999985
No 65
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.64 E-value=2.7e-07 Score=87.02 Aligned_cols=69 Identities=17% Similarity=0.039 Sum_probs=50.4
Q ss_pred CceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCcee
Q 041635 246 PLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKF 324 (345)
Q Consensus 246 P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F 324 (345)
|++.|+.-+++. +.|||+|.|++.+- -.++++|+++|.|..+. |++|.+++..+... +.+++.|. |..+
T Consensus 45 ~~i~~i~~~~N~-----G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~ 113 (281)
T TIGR01556 45 QKIALIHLGDNQ-----GIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFF 113 (281)
T ss_pred CCeEEEECCCCc-----chHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEE
Confidence 446777765544 59999999998731 12689999999999998 89999999988632 12366665 4433
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.59 E-value=5.2e-07 Score=86.13 Aligned_cols=61 Identities=18% Similarity=0.239 Sum_probs=45.7
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCCC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNIS 328 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~ 328 (345)
-++|.|.|.|+.. +++++|+++|+|+++. |+++.+++.+...=. ....+++-.|-.|.+..
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~-~~~~~~~~~p~~yl~~~ 134 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLD-KNPNAFLVYPCLYLSEE 134 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHh-cCCCceEEEeeeeccch
Confidence 4799999999998 8999999999999998 999999999322100 01136666676666543
No 67
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.41 E-value=3.3e-06 Score=81.40 Aligned_cols=123 Identities=20% Similarity=0.275 Sum_probs=94.6
Q ss_pred CCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCc
Q 041635 93 LPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPK 172 (345)
Q Consensus 93 ~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~ 172 (345)
.|.+.++|+||| -. +.+.+++.++.++.||. ..|+++|+|+++.|.+.+.+.
T Consensus 2 ~~~i~~iiv~yn---~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVTYN---RG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEecC---CH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhh----------------------
Confidence 378999999999 43 57899999999999998 455589999999876544321
Q ss_pred ccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEe
Q 041635 173 VYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVS 252 (345)
Q Consensus 173 ~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~ 252 (345)
..|.+.++.
T Consensus 54 -----------------------------------------------------------------------~~~~v~~i~ 62 (305)
T COG1216 54 -----------------------------------------------------------------------FFPNVRLIE 62 (305)
T ss_pred -----------------------------------------------------------------------cCCcEEEEE
Confidence 024567787
Q ss_pred ccCCCCCCCCChhhHHHHHHhhcccCCCCC-EEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecC
Q 041635 253 REKRPPHPHHFKAGALNCLLRVSSILSNSP-YILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHN 326 (345)
Q Consensus 253 R~k~~g~~~~~KAGalN~~l~~s~~~s~~~-~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n 326 (345)
-.++-| =||+.|.++..+. +++. ++++++-|.++. |++|.+++..+. ++. +++|+.-...++
T Consensus 63 ~~~NlG-----~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~~~----~~~~~~~i~~~~ 126 (305)
T COG1216 63 NGENLG-----FAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEEDPA----AGVVGPLIRNYD 126 (305)
T ss_pred cCCCcc-----chhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhCCC----CeEeeeeEecCC
Confidence 665444 7999999998842 4444 899999999998 999999999888 666 677776666555
No 68
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.28 E-value=5.9e-06 Score=75.21 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=41.4
Q ss_pred CceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCC
Q 041635 246 PLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDP 309 (345)
Q Consensus 246 P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp 309 (345)
+++....|.+..| =.-|.-+++.+ ++|+|+++.|||---+ |.|+-+.+..-.+-
T Consensus 63 d~i~l~pR~~klG-----LgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~ 116 (238)
T KOG2978|consen 63 DNILLKPRTKKLG-----LGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKEG 116 (238)
T ss_pred CcEEEEeccCccc-----chHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhcc
Confidence 4567778876444 55678888988 8999999999998766 99998877755443
No 69
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.23 E-value=1.6e-05 Score=76.38 Aligned_cols=113 Identities=19% Similarity=0.175 Sum_probs=75.4
Q ss_pred eeEEEeeccCCCCCChHHHHHHHHHHHcCCCCC---CceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCC
Q 041635 95 AIDVFICTADPKKEPPLEVMNTVLSAMALDYPS---KKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCP 171 (345)
Q Consensus 95 ~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~---~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p 171 (345)
.++|+||+||.++-=+.++..++.. +.-.|-. =+.+|+|+|||+.|.|.+.. ..||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~-le~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d---- 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDY-LEKRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD---- 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHH-HHHHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc----
Confidence 6899999999332222233333333 3335544 37999999999999876432 2478777632
Q ss_pred cccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEE
Q 041635 172 KVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYV 251 (345)
Q Consensus 172 ~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv 251 (345)
++.++
T Consensus 133 ---------------------------------------------------------------------------~irV~ 137 (323)
T KOG2977|consen 133 ---------------------------------------------------------------------------NIRVI 137 (323)
T ss_pred ---------------------------------------------------------------------------eEEEe
Confidence 24455
Q ss_pred eccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCC--CCCCChHHHHHHhchh
Q 041635 252 SREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCD--MFCNDPTSAKQAMCFH 306 (345)
Q Consensus 252 ~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD--~~~~~p~~L~~~v~~f 306 (345)
.-.++ .+|.||.--++-. +.|+++++.||| +...+-+.|.+.+.--
T Consensus 138 ~l~~n-----rgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~ 185 (323)
T KOG2977|consen 138 KLKKN-----RGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDK 185 (323)
T ss_pred ehhcc-----CCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhh
Confidence 54444 4499999999987 899999999999 3333457777777533
No 70
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.98 E-value=0.00011 Score=72.59 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=36.7
Q ss_pred eEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhh
Q 041635 96 IDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALT 143 (345)
Q Consensus 96 VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t 143 (345)
+-|+|.+|| -| +.+.+||.+++++.+-.+..+|+|++||+++.+
T Consensus 2 ~PVlv~ayN---Rp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 2 IPVLVIACN---RP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred cCEEEEecC---CH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 358899999 76 689999999999874446789999999998754
No 71
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=97.79 E-value=5.2e-05 Score=67.96 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=52.5
Q ss_pred CCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCceecCC
Q 041635 261 HHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNI 327 (345)
Q Consensus 261 ~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F~n~ 327 (345)
-+.|.+||-.+++. . ++++++++.|+|+.++ |++|++++..+.||+ +++|.++.++.+.
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~ 73 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA 73 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC
Confidence 47899999999986 2 7899999999999998 999999999999998 8999887776554
No 72
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.50 E-value=0.00047 Score=71.93 Aligned_cols=56 Identities=14% Similarity=0.056 Sum_probs=40.7
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCC------CChhhHHHHHH
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDA------GSALTLLALRQ 149 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg------~s~~t~~~l~e 149 (345)
..++.+=.+||+|| |..+.++.|+.|+..++||.++--++|+=|| .+..|.+.+.+
T Consensus 22 ~~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~ 83 (527)
T PF03142_consen 22 FPDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLD 83 (527)
T ss_pred CCCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHH
Confidence 34566778999999 8889999999999999999964444444444 34445555544
No 73
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=96.92 E-value=0.033 Score=55.79 Aligned_cols=131 Identities=14% Similarity=0.238 Sum_probs=93.4
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCC
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRC 170 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~ 170 (345)
..+|.|+|+-|--+ -. +...+.+++-...+|| +++...|=+.+.|.-.+.+.. +-+||
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi~vv~~----------Ll~ky------ 139 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSEDPAIEVVER----------LLKKY------ 139 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCCcHHHHHHH----------HHhhC------
Confidence 47899999999988 44 3568889999999999 599988877666643322211 11221
Q ss_pred CcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEE
Q 041635 171 PKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVY 250 (345)
Q Consensus 171 p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~y 250 (345)
|.+ -.-++
T Consensus 140 -----------------------------------------------------p~V-------------------dAklf 147 (431)
T KOG2547|consen 140 -----------------------------------------------------PNV-------------------DAKLF 147 (431)
T ss_pred -----------------------------------------------------CCc-------------------ceEEE
Confidence 111 00245
Q ss_pred EeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEE-eCCceecC
Q 041635 251 VSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFV-QFPQKFHN 326 (345)
Q Consensus 251 v~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~V-QtPQ~F~n 326 (345)
++.++- .-..|-.||--|.+. +..++|+|.|.|-... ||.+...+-=+..++ +.|+| |+|-.++-
T Consensus 148 ~gG~~v---g~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr 213 (431)
T KOG2547|consen 148 FGGEKV---GLNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDR 213 (431)
T ss_pred Eccccc---ccChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeecc
Confidence 666652 246799999989988 8899999999999997 999999888887555 37877 77766544
No 74
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.43 E-value=0.0078 Score=60.66 Aligned_cols=50 Identities=22% Similarity=0.257 Sum_probs=43.3
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChh
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSAL 142 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~ 142 (345)
..++|.-+|+|+-+| |....+.+||.|+++..=+.=-.+|+++||+|.|.
T Consensus 120 ~~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 120 KVDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred ecCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 357899999999999 99999999999999876444367899999999985
No 75
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.17 E-value=0.03 Score=56.49 Aligned_cols=49 Identities=31% Similarity=0.328 Sum_probs=40.6
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCC-ceEEEEEcCCCChh
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSK-KLHVYLSDDAGSAL 142 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~-kl~V~v~DDg~s~~ 142 (345)
++++|+++|+|.-+| |--..+++||-|++.-. |++ --+|+++||-+...
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~Rs-P~~~l~eivlvDDfSdKe 200 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRS-PRKYLAEIVLVDDFSDKE 200 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcC-cHHhhheEEEeccCCccH
Confidence 689999999999999 99999999999998654 444 45788888877763
No 76
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.87 E-value=0.0089 Score=63.04 Aligned_cols=50 Identities=24% Similarity=0.228 Sum_probs=41.8
Q ss_pred CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChh
Q 041635 90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSAL 142 (345)
Q Consensus 90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~ 142 (345)
...+|+++|+|+-+| |...++.+||-|....-=+.-..+|+++||++...
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~ 187 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRD 187 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchh
Confidence 356999999999999 99999999999887765444467899999999863
No 77
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.64 E-value=0.074 Score=42.14 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=27.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHH
Q 041635 108 EPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLAL 147 (345)
Q Consensus 108 Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l 147 (345)
|. ..+..-|.--+++.+- ++||.|||+++.|.+.|
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l 37 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTREIL 37 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHHHH
Confidence 66 4788888888888764 49999999999886444
No 78
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=94.02 E-value=0.26 Score=45.71 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=37.3
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchh-cCCCC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFH-LDPKL 311 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f-~Dp~~ 311 (345)
.+-|-+.|.|++. ++++|++++.=|..+.+++++.+++..| .||+.
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~ 86 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNI 86 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCc
Confidence 4478899999998 8999999999998887799999999999 69883
No 79
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=89.54 E-value=7 Score=37.84 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=42.1
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCC--hhhHHHHHHH
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGS--ALTLLALRQA 150 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s--~~t~~~l~ea 150 (345)
.+-++|=|+.|--| +++ .+..=...+.+++||++++++-++-.-++ +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn--a~~--~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AAS--FLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--chH--HHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45689999999988 333 67888889999999999999955544444 6777667644
No 80
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=88.54 E-value=2.4 Score=43.69 Aligned_cols=49 Identities=22% Similarity=0.341 Sum_probs=30.4
Q ss_pred CCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCChhhH
Q 041635 91 QNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPS-KKLHVYLSDDAGSALTL 144 (345)
Q Consensus 91 ~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~-~kl~V~v~DDg~s~~t~ 144 (345)
...|.+-|+|-+|| =| .-+.+||.++++.. |. ++..|+|+.||+...|.
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 45677889999999 77 47899999999988 55 68899999999987553
No 81
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=87.91 E-value=0.43 Score=41.93 Aligned_cols=28 Identities=32% Similarity=0.479 Sum_probs=25.6
Q ss_pred EEEEecCCCCCCChHHHHHHhchhcCCCC
Q 041635 283 YILVLDCDMFCNDPTSAKQAMCFHLDPKL 311 (345)
Q Consensus 283 ~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~ 311 (345)
+|+++|+|+.+. |++|++++++|.||+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~~ 28 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPKV 28 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCCc
Confidence 589999999998 9999999999988775
No 82
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=84.55 E-value=1.2 Score=49.20 Aligned_cols=47 Identities=19% Similarity=0.343 Sum_probs=36.8
Q ss_pred hhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCC
Q 041635 264 KAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSP 313 (345)
Q Consensus 264 KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~ 313 (345)
|-=-+|.+... ++.+-++|+.+|+|..+. |+++.+++.-|. ||++|.
T Consensus 426 ~r~~~y~~~~~--L~~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~Vgg 473 (862)
T KOG2571|consen 426 HRWVMYTAFKA--LMPSVDYILVVDADTRLD-PDALYHLVKVFDEDPQVGG 473 (862)
T ss_pred HHHHHHHHHHH--hcCcceEEEEecCCCccC-cHHHHHHHHHhccCcccce
Confidence 44455555554 335567999999999998 999999999999 999754
No 83
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=76.59 E-value=8.2 Score=38.73 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=33.9
Q ss_pred CCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 260 PHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 260 ~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
-..+|+-.|=-++-.+. ....+||-++|||.+. |.+..+=+.-|.
T Consensus 140 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 140 VRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred eecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 34679999888776532 3478999999999998 677777666554
No 84
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=76.48 E-value=8.2 Score=38.93 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=38.3
Q ss_pred CCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCc
Q 041635 261 HHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQ 322 (345)
Q Consensus 261 ~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ 322 (345)
..+|+-.|=-++-.+. ....+||-++|||.+. |.+..+=+.-|.- . .++-|+|-
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yAA-G----f~ma~spy 195 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYAA-G----FLMAESPY 195 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHHh-h----hcccCCCC
Confidence 4679999888775532 3478999999999998 6788776665541 1 45556663
No 85
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=74.33 E-value=4 Score=40.12 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=32.2
Q ss_pred HHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEE
Q 041635 269 NCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFV 318 (345)
Q Consensus 269 N~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~V 318 (345)
|.|+.. +..++++++|+|++|. +++-.....+........+.+||
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 555555 7899999999999998 78887777665532234445665
No 86
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=70.92 E-value=9.9 Score=38.39 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=41.2
Q ss_pred hhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC-------------------CCCcEEEEeCCcee
Q 041635 264 KAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK-------------------LSPSLAFVQFPQKF 324 (345)
Q Consensus 264 KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~-------------------~g~~va~VQtPQ~F 324 (345)
....+-+|+.. .+.+++++.|||+=.-+++.+++++..+.+.. ....+-.+||||.|
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~~~a~i~~~pv~Dtik~~~~tldR~~l~~~QTPQ~f 158 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDKADCVLPALPVADTLKRANETVDREGLKLIQTPQLS 158 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhcCCeEEEEEEeccCcEEeeeEcCcccEEEEECCCCC
Confidence 46678888876 34589999999974444899988887654311 02356778999999
Q ss_pred c
Q 041635 325 H 325 (345)
Q Consensus 325 ~ 325 (345)
.
T Consensus 159 ~ 159 (378)
T PRK09382 159 R 159 (378)
T ss_pred C
Confidence 5
No 87
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=64.53 E-value=40 Score=34.10 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=28.8
Q ss_pred CCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchh
Q 041635 261 HHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFH 306 (345)
Q Consensus 261 ~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f 306 (345)
.++|+-.|=-|+-.+. ....+||-++|||.+. |.+..+=+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 4669999988876543 3678999999999997 77777655444
No 88
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=56.99 E-value=34 Score=37.42 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=39.0
Q ss_pred CCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcEEEEeCCc
Q 041635 260 PHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQ 322 (345)
Q Consensus 260 ~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ 322 (345)
-..+|+-.|=-++-.+. ....+||-++|||.+. |.+..+=+.-|.- . .++-|||-
T Consensus 145 vr~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~yaa-g----~~~~~~~~ 199 (694)
T PRK14502 145 IRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFAT-G----FNLAQSPY 199 (694)
T ss_pred eecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHHh-h----hcccCCCC
Confidence 35679999888776532 4678999999999998 6787776666641 1 34446663
No 89
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=56.94 E-value=1.1e+02 Score=27.33 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=32.9
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCC-CCCChHHHHHHhchhcC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDM-FCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~-~~~~p~~L~~~v~~f~D 308 (345)
.+.++++-+|+..-. .+.+.++++++|+ +.. ++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 457899999887621 1268899999999 455 7888888887754
No 90
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=54.08 E-value=1.7e+02 Score=26.38 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=33.1
Q ss_pred ceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhch
Q 041635 247 LLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCF 305 (345)
Q Consensus 247 ~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~ 305 (345)
.+++.-.|++.+ .-.+=.=-.|+.-+ +-+-++++.+||.+.|. ++.|-++..-
T Consensus 110 Q~ifclKe~N~k-KinSHrWfFnaf~~----~l~P~vcvllDvGT~P~-~~siy~Lwka 162 (163)
T PF01644_consen 110 QIIFCLKEKNAK-KINSHRWFFNAFCR----QLQPNVCVLLDVGTKPG-KDSIYHLWKA 162 (163)
T ss_pred EEEEEecccccc-ccchhhHHHHHHHh----hcCCcEEEEEecCCCcC-chHHHHHHhh
Confidence 466777777543 11111112233333 36789999999999998 7988776543
No 91
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=53.69 E-value=2.1e+02 Score=30.06 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=36.2
Q ss_pred eEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHH
Q 041635 248 LVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQA 302 (345)
Q Consensus 248 l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~ 302 (345)
+.++.... ..-.++.+|..|++. .....++++.|.|+..+ ++||.+.
T Consensus 316 i~~i~~~~----~~fsr~~~Ld~g~~~---~~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 316 IKWISVKT----GEFSRGAALDVGAKK---FPPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred eEEEEecC----CCccHHHHHHhhccc---CCCCcEEEEEeCCcccC-HHHHHHH
Confidence 45555531 236699999999985 35678999999999998 8999864
No 92
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=51.27 E-value=2e+02 Score=26.44 Aligned_cols=47 Identities=6% Similarity=-0.103 Sum_probs=34.2
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D 308 (345)
-+....+-+++.......+.++|+++++|+=.-+++.+.+++-.|.+
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~ 122 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ 122 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 34566677777642111246899999999877778999999988875
No 93
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=43.35 E-value=68 Score=31.46 Aligned_cols=80 Identities=23% Similarity=0.220 Sum_probs=44.1
Q ss_pred cCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCCCCcE-EEEeCCce
Q 041635 245 MPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSL-AFVQFPQK 323 (345)
Q Consensus 245 ~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~g~~v-a~VQtPQ~ 323 (345)
+|++.|+.-...... ..-+---|+|...|-...++.+|+++|+|.+..--+|.+. +..-.-.++...| |+.--|-.
T Consensus 61 ~~~~~yl~~~s~~~F--~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~-l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGSPEPF--ASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKM-LSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCCCccc--cchhhhhhccchhhhccccccEEEEEeccccccHHHHHHH-HHHHHHHHHHhccCcceeeeee
Confidence 577888875432111 1113333555555433467899999999999873256554 3322222333334 56666666
Q ss_pred ecCC
Q 041635 324 FHNI 327 (345)
Q Consensus 324 F~n~ 327 (345)
|-|.
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 6554
No 94
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=40.87 E-value=65 Score=30.55 Aligned_cols=60 Identities=13% Similarity=-0.004 Sum_probs=38.1
Q ss_pred hhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCCC-------------------------CCcEEEEe
Q 041635 265 AGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKL-------------------------SPSLAFVQ 319 (345)
Q Consensus 265 AGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~~-------------------------g~~va~VQ 319 (345)
.+.+=+|+.... .+.++|++-|+++=.-.++.+.+++.....-.. ..++-.+|
T Consensus 104 ~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~~~~ga~i~~~~~~dtik~v~~~~~v~~t~~R~~l~~~Q 181 (252)
T PLN02728 104 QDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDAAVHGAAVLGVPVKATIKEANSDSFVVKTLDRKRLWEMQ 181 (252)
T ss_pred HHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHHhhCCeEEEeecchhhEEEecCCCceeeccChHHeEEEe
Confidence 455666776522 356899999996543347888777754432110 12456789
Q ss_pred CCceecC
Q 041635 320 FPQKFHN 326 (345)
Q Consensus 320 tPQ~F~n 326 (345)
|||.|.-
T Consensus 182 TPQ~F~~ 188 (252)
T PLN02728 182 TPQVIKP 188 (252)
T ss_pred CCccchH
Confidence 9999964
No 95
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=38.90 E-value=1.1e+02 Score=26.47 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=32.8
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCC-CCCChHHHHHHhchhc
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDM-FCNDPTSAKQAMCFHL 307 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~-~~~~p~~L~~~v~~f~ 307 (345)
.+-.+++-.|+.. .+.+.+++++||+ +.+ ++.+++++..+.
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhh
Confidence 4567788888876 3568999999999 565 899999888775
No 96
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=36.31 E-value=1.1e+02 Score=30.82 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=25.8
Q ss_pred hHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHH
Q 041635 266 GALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQA 302 (345)
Q Consensus 266 GalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~ 302 (345)
.+|+..++.++ +..+++|++-|+|-+|+ |+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 45655555433 46789999999999998 8888643
No 97
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=36.00 E-value=1.4e+02 Score=25.63 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=32.9
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchh
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFH 306 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f 306 (345)
.+-.+.+..|+.. .+.+.++++.|||-.-+++.+++++-.+
T Consensus 69 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 69 KGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 4467889999987 4588999999999443489999988766
No 98
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=33.39 E-value=2.7e+02 Score=27.79 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=31.8
Q ss_pred ChhhHHHHHHhhcccCCCCCEEEEecCCC-CCCChHHHHHHhchhcC
Q 041635 263 FKAGALNCLLRVSSILSNSPYILVLDCDM-FCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 263 ~KAGalN~~l~~s~~~s~~~~i~~~DaD~-~~~~p~~L~~~v~~f~D 308 (345)
+-++++-+++... .+.+.++++++|+ +.. ++.+++++..+.+
T Consensus 76 G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i~-~~~~~~l~~~~~~ 118 (451)
T TIGR01173 76 GTGHAVLQALPFL---PDDGDVLVLYGDVPLIS-AETLERLLEAHRQ 118 (451)
T ss_pred chHHHHHHHHHhc---CCCCcEEEEECCcCCcC-HHHHHHHHHHHhh
Confidence 4788888888762 3447889999999 565 7889998887754
No 99
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=30.72 E-value=1.4e+02 Score=26.56 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=32.2
Q ss_pred hhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 264 KAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 264 KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
...++.+|+.... -.+.+.+++.+||+=.-+++.+++++..+.
T Consensus 80 ~~~si~~al~~~~-~~~~~~vlv~~~D~P~i~~~~i~~li~~~~ 122 (218)
T cd02516 80 RQDSVLNGLKALP-DADPDIVLIHDAARPFVSPELIDRLIDALK 122 (218)
T ss_pred HHHHHHHHHHhcc-cCCCCEEEEccCcCCCCCHHHHHHHHHHHh
Confidence 5677888887520 025789999999986555899999998764
No 100
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=30.31 E-value=77 Score=29.65 Aligned_cols=70 Identities=16% Similarity=0.278 Sum_probs=43.6
Q ss_pred EEeeccCCCCCChHHHHHHHHHHHcCCCC--CCceEEEEEcCCCChhhHHHHHHH-HhhhccchhHHHHh-CCccCCCc
Q 041635 98 VFICTADPKKEPPLEVMNTVLSAMALDYP--SKKLHVYLSDDAGSALTLLALRQA-CAFASSWLPFCRRF-GIKTRCPK 172 (345)
Q Consensus 98 V~V~tynp~~Ep~~~v~~tv~s~laldYP--~~kl~V~v~DDg~s~~t~~~l~ea-~~~a~~W~~~c~~~-~v~~r~p~ 172 (345)
|+||+-+ -.|.+|-.|+-++.+...| .+.+.|+=--+|.... ..+|..- .+....|..||+.+ +. +++++
T Consensus 1 ILvat~G---~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~~-~~~Ll~~~~~~~g~~~~l~~dy~~~-~~~~~ 74 (209)
T TIGR02584 1 ILLCVSG---MSPQIITETIYALAQESPPVVPEEIHVITTSDGKRDI-QQQLLTPDEAWQGVLAKLRHDYFQG-PRPPF 74 (209)
T ss_pred CEEEecC---CCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHHH-HHHhccCccchhhHHHHHHHHHhcc-Ccccc
Confidence 5788888 7778999999999999888 7666555556654432 2222100 00013455789888 53 45443
No 101
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=28.99 E-value=5e+02 Score=24.48 Aligned_cols=61 Identities=16% Similarity=0.292 Sum_probs=40.8
Q ss_pred EEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCC
Q 041635 97 DVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGI 166 (345)
Q Consensus 97 dV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v 166 (345)
.|+|+|-+ ..|.+|-.|+.++.+..++.+.+.|+=-.||.......-| ...+..||+.++.
T Consensus 3 ~iLlatlG---~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll------~g~~~~l~~~y~~ 63 (224)
T PF09623_consen 3 NILLATLG---TSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL------DGGLQRLCQDYYL 63 (224)
T ss_pred eEEEEecC---CCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH------HHHHHHHHHhhcC
Confidence 47899999 7789999999999999988876555544554443222112 0113358888765
No 102
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=28.60 E-value=1.5e+02 Score=25.60 Aligned_cols=42 Identities=14% Similarity=-0.030 Sum_probs=30.6
Q ss_pred ChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 263 FKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 263 ~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
+-++++-.|+.. ..+.+.+++++||+-.-.++.+++++-.+.
T Consensus 75 g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 75 GQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred CHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 356677777762 146789999999994323899999888765
No 103
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=27.20 E-value=1.1e+02 Score=31.01 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=38.1
Q ss_pred CCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCChhhH
Q 041635 93 LPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPS-KKLHVYLSDDAGSALTL 144 (345)
Q Consensus 93 ~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~-~kl~V~v~DDg~s~~t~ 144 (345)
-|-.-|+|=+|| -+ +.+++++..++.+. |. +|.-|+|+-||+...+-
T Consensus 66 ~~v~pvvVf~cs---R~-~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk 113 (411)
T KOG1413|consen 66 PPVIPVVVFACS---RA-DALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVK 113 (411)
T ss_pred CCceeEEEEecC---cH-HHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHH
Confidence 345667777887 55 68899999999999 77 79999999999997543
No 104
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=26.93 E-value=1.7e+02 Score=24.54 Aligned_cols=57 Identities=18% Similarity=0.124 Sum_probs=41.1
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCC-CCChHHHHHHhchhcCCCCCCcEEEEeCCcee
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMF-CNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKF 324 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~-~~~p~~L~~~v~~f~Dp~~g~~va~VQtPQ~F 324 (345)
.+=+++|=+|+... .+.+.++++-||+. ++ ++.+++++..+.+ .+.+++++.++...
T Consensus 70 ~G~~~sl~~a~~~~---~~~~~vlv~~~D~p~~~-~~~l~~l~~~~~~--~~~~i~~~~~~~~~ 127 (160)
T PF12804_consen 70 QGPLASLLAALSQL---PSSEPVLVLPCDQPFLS-PELLRRLLEALEK--SPADIVVPVFRGGR 127 (160)
T ss_dssp CSHHHHHHHHHHTS---TTSSEEEEEETTETTS--HHHHHHHHHHHHH--TTTSEEEEEETTEE
T ss_pred CChHHHHHHHHHhc---ccCCCcEEEeCCccccC-HHHHHHHHHHHhc--cCCcEEEEEECCcc
Confidence 44667777777651 27899999999994 56 8999999998861 22458888877444
No 105
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=26.82 E-value=1.8e+02 Score=26.01 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=30.8
Q ss_pred hhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 264 KAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 264 KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
=.+++-.|+.. .+.+.+++++||+=.-.++.+.+++..+.
T Consensus 80 ~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 80 PLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred hHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 44677777775 45689999999986656899988887664
No 106
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=26.72 E-value=1.2e+02 Score=25.85 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=33.0
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCC-CCCChHHHHHHhchhc
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDM-FCNDPTSAKQAMCFHL 307 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~-~~~~p~~L~~~v~~f~ 307 (345)
.+-++++..|+.... .+.+.++++.||+ ..+ ++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 456778888888732 1478999999999 555 899999887765
No 107
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=26.48 E-value=2.7e+02 Score=28.65 Aligned_cols=68 Identities=15% Similarity=0.241 Sum_probs=43.2
Q ss_pred CCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCC
Q 041635 92 NLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCP 171 (345)
Q Consensus 92 ~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p 171 (345)
.-|+|+.|-|..| ++...-.+-+++. +..-|. +.+.++|.+.+..--.+. -+++.=++|.|
T Consensus 342 s~~~V~L~Y~~~n---~e~~~y~~eLr~~-~qkl~~--~~lHiiDSs~~g~l~~e~-------------ler~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCSRN---WEEALYAEELRAL-AQKLPN--VVLHIIDSSKDGYLDQED-------------LERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEecC---CchhHHHHHHHHH-HhcCCC--eEEEEecCCCCCccCHHH-------------hhccccccCcc
Confidence 4589999999999 7766767677664 444566 666666655554211111 12345567788
Q ss_pred cccccCC
Q 041635 172 KVYFSNL 178 (345)
Q Consensus 172 ~~yf~~~ 178 (345)
..||+..
T Consensus 403 sv~fCGP 409 (438)
T COG4097 403 SVFFCGP 409 (438)
T ss_pred eEEEEcC
Confidence 8899654
No 108
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=25.20 E-value=73 Score=29.68 Aligned_cols=60 Identities=18% Similarity=0.109 Sum_probs=39.7
Q ss_pred ChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHH---HHHHhchhcCCCCCCcEEEEeCCceec
Q 041635 263 FKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTS---AKQAMCFHLDPKLSPSLAFVQFPQKFH 325 (345)
Q Consensus 263 ~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~---L~~~v~~f~Dp~~g~~va~VQtPQ~F~ 325 (345)
+-++++|.||-.+. ..+++++++|.|-++- |.- ....+.-+++.-.+..++.+++++.+.
T Consensus 88 ~q~~a~~DCl~r~~--~~~~~v~f~DiDE~lv-P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 150 (285)
T PF01697_consen 88 GQIAAYNDCLLRYR--YRAKWVAFIDIDEFLV-PTNAPTYPEEFEDLLREFPNISAGAYSFRNSWF 150 (285)
T ss_pred HHHHHHHHHHHHhh--hhceEEEEeccccEEE-eccccchhhHHHHHHhhccccceEEEEEeEEEE
Confidence 35899999998854 6789999999997665 544 223333333322334577788777775
No 109
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=23.82 E-value=2.4e+02 Score=26.64 Aligned_cols=96 Identities=21% Similarity=0.166 Sum_probs=56.0
Q ss_pred CCccceEEeecCCC-c-h--hhhc-ccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCC-CCCCC
Q 041635 222 INPSIVEVIIDKSD-D-E--VRAN-QVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCD-MFCND 295 (345)
Q Consensus 222 ~~~~i~~~~~~~~~-~-~--~~~~-~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD-~~~~~ 295 (345)
.||.+-+++..... . . .+.. ...-+++.++... ...+...-++|..... ...++|++-||= -+..
T Consensus 44 ~~~~i~~Ivvv~~~~~~~~~~~~~~~~~~~~v~~v~GG-------~~R~~SV~~gL~~~~~-~~~~~VlvHDaaRPf~~- 114 (230)
T COG1211 44 ESPAIDEIVVVVSPEDDPYFEKLPKLSADKRVEVVKGG-------ATRQESVYNGLQALSK-YDSDWVLVHDAARPFLT- 114 (230)
T ss_pred hCcCCCeEEEEEChhhhHHHHHhhhhccCCeEEEecCC-------ccHHHHHHHHHHHhhc-cCCCEEEEeccccCCCC-
Confidence 36666666554332 1 1 1111 2334556666432 3467777788876321 258999999986 4554
Q ss_pred hHHHHHHhchhcCCCC-------------------------CCcEEEEeCCceecC
Q 041635 296 PTSAKQAMCFHLDPKL-------------------------SPSLAFVQFPQKFHN 326 (345)
Q Consensus 296 p~~L~~~v~~f~Dp~~-------------------------g~~va~VQtPQ~F~n 326 (345)
++.+.+++-.-.+... ...+-.+||||.|.-
T Consensus 115 ~~~i~~li~~~~~~~aai~alpv~DTik~~~~~~~i~~t~~R~~l~~~QTPQ~F~~ 170 (230)
T COG1211 115 PKLIKRLIELADKYGAAILALPVTDTLKRVDADGNIVETVDRSGLWAAQTPQAFRL 170 (230)
T ss_pred HHHHHHHHHhhccCCcEEEEeeccCcEEEecCCCCeeeccChhhhhhhhCCccccH
Confidence 7888888832222221 135778999999953
No 110
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=22.57 E-value=1.8e+02 Score=25.46 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=31.6
Q ss_pred hhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc
Q 041635 264 KAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL 307 (345)
Q Consensus 264 KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~ 307 (345)
-.+++-+++.. .+.+.+++++||+-.-+++.+++++..+.
T Consensus 76 ~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 76 PLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 45678888875 56799999999994434899999988765
No 111
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=20.62 E-value=2.8e+02 Score=24.22 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=29.8
Q ss_pred CChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcC
Q 041635 262 HFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLD 308 (345)
Q Consensus 262 ~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~D 308 (345)
.+-++++-.++.. -+.+.+++++||++.+ .++ .+.+.++..
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~~-~~~-~~~~~~~~~ 121 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLTD-LDL-SELLRFHRE 121 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeecC-cCH-HHHHHHHHh
Confidence 4468999998876 2567899999999886 564 455665553
Done!