BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041639
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 70/90 (77%), Gaps = 7/90 (7%)
Query: 37 DLAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAML 96
++A RL+ SGGL ECWN L E+KSC+NEIV+FFL+ + +G+ CC ++DIIT NCWPAML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 97 TSLGFTAEEGNILRGYC------DASFAPS 120
TSLGFT EE N+LRG+C D+S APS
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 37 DLAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAML 96
++A RL GGL ECWN L E+KSC+NEIV+FFL+ + +G+DCC+A+++IT +CWPAML
Sbjct: 33 NIAARLNG-GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91
Query: 97 TSLGFTAEEGNILRGYCDA 115
TSLGFT++E N+LRG+C +
Sbjct: 92 TSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Query: 37 DLAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAML 96
++A RL GGL +CW+ L E+KSC+NEIV+FFL+ + +G CC A+D+IT +CWPAML
Sbjct: 33 NIAARLTG-GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91
Query: 97 TSLGFTAEEGNILRGYCDASFAPSLGGFVVIYQP 130
TSLGFT EE N+LRG+C +P+ GG P
Sbjct: 92 TSLGFTLEETNVLRGFCQ---SPNSGGSSPALSP 122
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 38 LAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAMLT 97
L RL+ CW++LM+++ CS E+++FFL+ + IG CC AI I R CWP M+
Sbjct: 44 LVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIG 103
Query: 98 SLGFTAEEGNILRGYCDA 115
LGFTA+EG++L+GYCD
Sbjct: 104 VLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 38 LAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDS--------QDDIGLDCCRAIDIITR 89
+A +G L +CWN +E+KSC++EIV FFL + I DCC AI ++ +
Sbjct: 40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99
Query: 90 NCWPAMLTSLGFTAEEGNILRGYCD 114
+CW M TSLG T EGN LR YC+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE 124
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 78 LDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 114
+D CR D++T + W TS+GF AE ++ + D
Sbjct: 208 MDACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|A1K7J9|OTC_AZOSB Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72)
GN=arcB PE=3 SV=1
Length = 311
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 78 LDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 114
L+ CR D++T + W TS+GF AE ++ + D
Sbjct: 209 LEACRGADLVTTDVW----TSMGFEAENEARMKAFAD 241
>sp|Q54KF1|FORC_DICDI Formin-C OS=Dictyostelium discoideum GN=forC PE=1 SV=1
Length = 1158
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 CWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAMLTSLGFTAEEGNILR 110
CW +++++ I+ +S D + L C IT NC ++L LG G++ R
Sbjct: 774 CWEFMLKIEDSLKSII----ESIDTVLLACKELRTSITINCLFSLLLQLGNYLNGGHLYR 829
Query: 111 GYCDASFAPSLGGFVVI 127
G D SL + I
Sbjct: 830 GQSDGFNLESLSKMIEI 846
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 75 DIGLDCCRAIDIITRNCWPAMLTSLGFTAEEGNILR 110
D+ + +DI R+ WP ML+ FT+++ N+ +
Sbjct: 401 DLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNLAQ 436
>sp|Q5KUD7|LIPL_GEOKA Octanoyl-[GcvH]:protein N-octanoyltransferase OS=Geobacillus
kaustophilus (strain HTA426) GN=lipL PE=3 SV=1
Length = 283
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 94 AMLTSLGFTAEEGNILRGYCDASFAPSLGG--FVVIYQPQV 132
AML S G E G I+ YC S+ S+GG F I Q +V
Sbjct: 128 AMLASYGARVEAGEIVGSYCPGSYDLSIGGKKFAGISQRRV 168
>sp|Q04431|KRE28_YEAST Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRE28 PE=1 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 35 GYDLAIR--------LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDI 86
G++ A R LEA+G + CW++L E+K+ +N+ + +D I L+ + D
Sbjct: 162 GHNFAERQDLINELYLEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDF 220
Query: 87 I--TRNCWPAML 96
+ T W +L
Sbjct: 221 VEETYTNWQKLL 232
>sp|Q5P0Z8|OTC_AROAE Ornithine carbamoyltransferase OS=Aromatoleum aromaticum (strain
EbN1) GN=argF PE=3 SV=1
Length = 307
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 78 LDCCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCD 114
++ C+ D++T + W TS+GF AE ++ + D
Sbjct: 209 MEACKGADLVTTDVW----TSMGFEAENDERMKDFAD 241
>sp|C8Z692|KRE28_YEAS8 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRE28 PE=3
SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 42 LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDII--TRNCWPAML 96
LEA+G + CW++L E+K+ +N+ + +D I L+ + D + T W +L
Sbjct: 177 LEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDFVEETYTNWQKLL 232
>sp|A6ZZB9|KRE28_YEAS7 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain YJM789) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 42 LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDII--TRNCWPAML 96
LEA+G + CW++L E+K+ +N+ + +D I L+ + D + T W +L
Sbjct: 177 LEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDFVEETYTNWQKLL 232
>sp|B5VH51|KRE28_YEAS6 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 42 LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDII--TRNCWPAML 96
LEA+G + CW++L E+K+ +N+ + +D I L+ + D + T W +L
Sbjct: 177 LEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDFVEETYTNWQKLL 232
>sp|C7GKW3|KRE28_YEAS2 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain JAY291) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 42 LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDII--TRNCWPAML 96
LEA+G + CW++L E+K+ +N+ + +D I L+ + D + T W +L
Sbjct: 177 LEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDFVEETYTNWQKLL 232
>sp|B3LFD9|KRE28_YEAS1 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 42 LEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDII--TRNCWPAML 96
LEA+G + CW++L E+K+ +N+ + +D I L+ + D + T W +L
Sbjct: 177 LEATGDIENCWDSLNELKNLTNKEDKNMMGEKDTI-LNSSDSDDFVEETYTNWQKLL 232
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 20 NATSMNDRLNNKIKLGYDLAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQ 73
NA ++ +LNN +K+ IR+E G + TL + S+ + +F DS+
Sbjct: 228 NAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALFQQDSE 281
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis
elegans GN=rrt-1 PE=2 SV=2
Length = 713
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 33 KLGYDLAIRLEA-SGGLTECWNTLMEMKSCSNEIVIFFLDSQ-DDIG 77
K Y+ ++L++ G + + WNT+ ++ N+IV +LD + D+G
Sbjct: 340 KRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVG 386
>sp|P05882|ENV_HV1Z8 Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1
group M subtype D (isolate Z84) GN=env PE=3 SV=1
Length = 863
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 38 LAIRLEASGGLTECWNTLMEMKSCSNEIVIFFLDSQDDIGLDCCRAIDIITRNCWPAMLT 97
++ +L +G L E ++ ++ +N + + + + ++C R + ITR P L
Sbjct: 267 VSTQLLLNGSLAEE-EIIIRSENLTNNVKTIIVHLNESVEINCTRPDNKITRQSTPIGLG 325
Query: 98 SLGFTAE-EGNILRGYCDASFA 118
+T +G+I + YC+ S A
Sbjct: 326 QALYTTRIKGDIRQAYCNISAA 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,957,906
Number of Sequences: 539616
Number of extensions: 1597464
Number of successful extensions: 4291
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4275
Number of HSP's gapped (non-prelim): 21
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)