Query 041642
Match_columns 265
No_of_seqs 155 out of 742
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:42:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 2.6E-83 9.1E-88 634.1 22.3 240 17-265 16-255 (554)
2 3m00_A Aristolochene synthase; 100.0 4.9E-83 1.7E-87 631.8 22.6 241 16-265 10-251 (550)
3 2ong_A 4S-limonene synthase; m 100.0 3.7E-82 1.3E-86 625.4 21.8 240 22-265 1-244 (543)
4 3n0f_A Isoprene synthase; terp 100.0 1.3E-81 4.3E-86 622.4 19.3 239 21-265 13-253 (555)
5 2j5c_A 1,8-cineole synthase; t 100.0 1.4E-81 4.7E-86 624.3 16.3 238 19-265 31-271 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 3E-81 1E-85 619.7 16.8 241 21-265 4-250 (549)
7 3p5p_A Taxadiene synthase; cla 100.0 2.4E-64 8.1E-69 514.2 18.5 195 69-265 243-458 (764)
8 3s9v_A Abietadiene synthase, c 100.0 3.8E-64 1.3E-68 513.9 18.6 195 69-265 267-487 (785)
9 3sdr_A Alpha-bisabolene syntha 100.0 4E-64 1.4E-68 515.5 18.2 195 69-265 295-515 (817)
10 3pya_A ENT-copalyl diphosphate 100.0 4E-63 1.4E-67 502.1 19.5 212 51-265 220-462 (727)
11 3sdr_A Alpha-bisabolene syntha 97.6 1.6E-05 5.4E-10 82.1 2.2 45 21-66 23-68 (817)
12 1pd3_A Nonstructural protein N 47.1 10 0.00034 26.2 2.0 33 52-86 16-48 (58)
13 1c07_A Protein (epidermal grow 42.2 90 0.0031 22.1 7.4 61 71-140 25-86 (95)
14 3s9v_A Abietadiene synthase, c 41.9 13 0.00043 38.3 2.7 40 27-66 5-45 (785)
15 1fi6_A EH domain protein REPS1 29.0 1.5E+02 0.0051 20.7 6.5 74 58-140 8-84 (92)
16 1qjt_A EH1, epidermal growth f 26.7 1.8E+02 0.0061 20.9 7.6 61 75-143 29-89 (99)
17 1b0n_B Protein (SINI protein); 23.3 55 0.0019 22.6 2.6 25 75-102 14-38 (57)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=2.6e-83 Score=634.14 Aligned_cols=240 Identities=52% Similarity=0.859 Sum_probs=214.3
Q ss_pred ccccccccCCCCCCCCCccCccccCCCCcchhhHHHHHHHHHHHHHHHHHhccCCccccchhHHHHHHHhCcccccHHHH
Q 041642 17 AEKDYTRRSANFHPSIWGDRFLSYTSDSMEKDDGSAKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRLGVSYHFESEI 96 (265)
Q Consensus 17 ~~~~~~r~~a~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRLGI~~hFe~EI 96 (265)
.+.++.||+|||+||+|||+||++ +.....+.+.+|+++||++||+||.....|++ ++|+|||+||||||+|||++||
T Consensus 16 ~~~~~~R~~~~~~ps~W~~~fl~~-~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~-~~l~lID~lqrLGi~~hF~~EI 93 (554)
T 3g4d_A 16 SNKDEMRPKADFQPSIWGDLFLNC-PDKNIDAETEKRHQQLKEEVRKMIVAPMANST-QKLAFIDSVQRLGVSYHFTKEI 93 (554)
T ss_dssp ---------CCCCCCTTTTTTTSC-CC---CHHHHHHHHHHHHHHHHHHHSCCSSHH-HHHHHHHHHHHTTCGGGCHHHH
T ss_pred ccCCCCCCCCCCCccccccccccC-CCchhhHHHHHHHHHHHHHHHHHHHhcccCHH-HHHHHHHHHHHcCchhhhHHHH
Confidence 345668999999999999999997 43223457899999999999999974346899 9999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcCccccccccccccccccccccccchhhHHHHHHHHhhccCCCC
Q 041642 97 DEILGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFKRFKDSDGNFKTSLAKDVGGMLSLYEATHLGVHE 176 (265)
Q Consensus 97 ~~~L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G~Fk~~l~~Dv~glLsLYeAS~l~~~g 176 (265)
+++|++||++ . .....|||+|||+|||||||||+||||||++|+|++|+|++++.+||+|||+|||||||++||
T Consensus 94 ~~~L~~i~~~-~-----~~~~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~g 167 (554)
T 3g4d_A 94 EDELENIYHN-N-----NDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHG 167 (554)
T ss_dssp HHHHHHHHHS-C-----CCTTCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHhc-c-----CCCCCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCC
Confidence 9999999975 1 112379999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHhccCCcccCchhhHHhhcccccccCCcccHHHHHHHHhhhHHHHHHH
Q 041642 177 ENILDEALAFTTSHLESIAAHQIGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSSHNEALLTFAKLDFNKLQKLH 256 (265)
Q Consensus 177 E~iLdeA~~Fs~~~L~~~~~~~~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~h 256 (265)
|+|||+|+.||+++|++.+++++ ++|+++|+|||++|||++|||+||||||+.|++++++|++||||||+|||+||++|
T Consensus 168 E~iLdeA~~fs~~~L~~~~~~~~-~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~h 246 (554)
T 3g4d_A 168 EDILDEAISFTTHHLSLAVASLD-HPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLH 246 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCC-TTHHHHHHHHHHCCTTTSCHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHhCCCccCCchHHHHHHHHHHhCcCccccHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988777 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhC
Q 041642 257 QKELGDISR 265 (265)
Q Consensus 257 q~EL~~lsr 265 (265)
|+||++++|
T Consensus 247 q~El~~l~r 255 (554)
T 3g4d_A 247 RKELSEICR 255 (554)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999985
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=4.9e-83 Score=631.78 Aligned_cols=241 Identities=50% Similarity=0.822 Sum_probs=220.3
Q ss_pred cccccccccCCCCCCCCCccCccccCCCCcchhhHHHHHHHHHHHHHHHHHhccCCccccchhHHHHHHHhCcccccHHH
Q 041642 16 NAEKDYTRRSANFHPSIWGDRFLSYTSDSMEKDDGSAKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRLGVSYHFESE 95 (265)
Q Consensus 16 ~~~~~~~r~~a~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRLGI~~hFe~E 95 (265)
++..++.||+|||+||+|||+||++.+.....+.+.+|+++||++||+||.+...+++ ++|+|||+||||||+|||++|
T Consensus 10 ~~~~~~~R~~~~~~ps~W~d~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~-~~L~lID~lqrLGi~~hF~~E 88 (550)
T 3m00_A 10 NYEEEIVRPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATGMKLA-DTLNLIDTIERLGISYHFEKE 88 (550)
T ss_dssp ------CCCCCCCCCCTTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHTCSSCCHH-HHHHHHHHHHHTTCGGGCHHH
T ss_pred ccccccCCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhcccCHH-HHHHHHHHHHHcCchhhhHHH
Confidence 3455668999999999999999997653323457889999999999999974346889 999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcCccccccccccccccccccccccchhhHHHHHHHHhhccCCC
Q 041642 96 IDEILGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFKRFKDSDGNFKTSLAKDVGGMLSLYEATHLGVH 175 (265)
Q Consensus 96 I~~~L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G~Fk~~l~~Dv~glLsLYeAS~l~~~ 175 (265)
|+++|++||++|. . ..|||+|||+|||||||||+||||||++|+|++|+|++++.+||+|||+|||||||++|
T Consensus 89 I~~~L~~i~~~~~-----~--~~dl~~~al~FRLLR~hGy~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~ 161 (550)
T 3m00_A 89 IDDILDQIYNQNS-----N--CNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTH 161 (550)
T ss_dssp HHHHHHHHHHHCC-----C--CSSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhcc-----c--CCCHHHHHHHHHHHHhcCCCCChHHhhhccccCCCccccchhchHHHHHHHHHHhcCCC
Confidence 9999999999863 1 37999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHhccCCcccCchhhHHhhccc-ccccCCcccHHHHHHHHhhhHHHHH
Q 041642 176 EENILDEALAFTTSHLESIAAHQIGSPLAERVKHALIQPIHRGLQRLEARHYIP-IYQEQSSHNEALLTFAKLDFNKLQK 254 (265)
Q Consensus 176 gE~iLdeA~~Fs~~~L~~~~~~~~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~-~Y~~~~~~n~~lLelAklDFn~~Qs 254 (265)
||+|||+|+.||+++|++.+++++ ++|+++|+|||++|||+++||+||||||+ .|++++.+|++||||||+|||+||+
T Consensus 162 gE~iLdeA~~fs~~~L~~~~~~~~-~~l~~~V~~aL~~P~~~~l~rlear~yI~~~Y~~~~~~n~~lLelAkldFn~~Q~ 240 (550)
T 3m00_A 162 ADDILEDALAFSTIHLESAAPHLK-SPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQM 240 (550)
T ss_dssp TCGGGTTHHHHHHHHHHHHGGGCC-TTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHhccC-ccHHHHHHHHhCCCccCCchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999999988777 88999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHhhhC
Q 041642 255 LHQKELGDISR 265 (265)
Q Consensus 255 ~hq~EL~~lsr 265 (265)
+||+||++++|
T Consensus 241 ~hq~EL~~l~r 251 (550)
T 3m00_A 241 LHKQELAQVSR 251 (550)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99999999985
No 3
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=3.7e-82 Score=625.43 Aligned_cols=240 Identities=34% Similarity=0.542 Sum_probs=220.1
Q ss_pred cccCCCCCCCCCccCccccCCCCcchhhHHHHHHHHHHHHHHHHHhccCCccccchhHHHHHHHhCcccccHHHHHHHHH
Q 041642 22 TRRSANFHPSIWGDRFLSYTSDSMEKDDGSAKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRLGVSYHFESEIDEILG 101 (265)
Q Consensus 22 ~r~~a~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~ 101 (265)
.||+|||+||+||++||++.+.....+.+.+++++||++||+|+.. ..|++ ++|+|||+||||||+|||++||+++|+
T Consensus 1 ~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~-~~l~liD~lqrLGi~~hF~~EI~~~L~ 78 (543)
T 2ong_A 1 MRRSGNYNPSRWDVNFIQSLLSDYKEDKHVIRASELVTLVKMELEK-ETDQI-RQLELIDDLQRMGLSDHFQNEFKEILS 78 (543)
T ss_dssp CCCCCCCCCCSSCHHHHHHCCCSSCSTHHHHHHHHHHHHHHHHHHH-CCCHH-HHHHHHHHHHHTTGGGTTHHHHHHHHH
T ss_pred CCCCCCCCCCcCCcccccCCCchhhhhHHHHHHHHHHHHHHHHHhc-ccCHH-HHHHHHHHHHhCCchhhhHHHHHHHHH
Confidence 3899999999999999975432222347899999999999999986 45899 999999999999999999999999999
Q ss_pred HHHhhhccCCCCC-CC-CCchhhHHHHHHHHhhcCccccccccccccccccccccccchhhHHHHHHHHhhccCCCCchH
Q 041642 102 KLHEAHQDCGLGD-NE-NDELYYISLQFRLLRQHGCKISADVFKRFKDSDGNFKTSLAKDVGGMLSLYEATHLGVHEENI 179 (265)
Q Consensus 102 ~i~~~~~~~g~~~-~~-~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G~Fk~~l~~Dv~glLsLYeAS~l~~~gE~i 179 (265)
+||++| ..|+++ .. ..|||+|||+|||||||||+||||||++|||++|+|++++++||+|||+|||||||++|||+|
T Consensus 79 ~i~~~~-~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~i 157 (543)
T 2ong_A 79 SIYLDH-HYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETT 157 (543)
T ss_dssp HHHHTT-TCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCHH
T ss_pred HHHHhh-cccccccccccCCHHHHHHHHHHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChHH
Confidence 999986 333322 12 469999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh-c-CCCChHHHHHHhccCCcccCchhhHHhhcccccccCCcccHHHHHHHHhhhHHHHHHHH
Q 041642 180 LDEALAFTTSHLESIAAH-Q-IGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSSHNEALLTFAKLDFNKLQKLHQ 257 (265)
Q Consensus 180 LdeA~~Fs~~~L~~~~~~-~-~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq 257 (265)
||||+.||+++|++.+++ + + ++|+++|+|||++|||++|||+|||+||+.|++++++|++||||||+|||+||++||
T Consensus 158 L~eA~~Ft~~~L~~~~~~~~~~-~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq 236 (543)
T 2ong_A 158 LESAREFATKFLEEKVNEGGVD-GDLLTRIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQ 236 (543)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSS-SHHHHHHHHHHHSCTTTSCSTTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCC-CcHHHHHHHHHhhhHhccchHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999886 5 6 889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhC
Q 041642 258 KELGDISR 265 (265)
Q Consensus 258 ~EL~~lsr 265 (265)
+||++++|
T Consensus 237 ~El~~l~r 244 (543)
T 2ong_A 237 EELKESFR 244 (543)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999975
No 4
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=1.3e-81 Score=622.45 Aligned_cols=239 Identities=40% Similarity=0.604 Sum_probs=213.2
Q ss_pred ccccCCCCCCCCCccCccccCCCCcchhhHHHHHHHHHHHHHHHHHhccC-CccccchhHHHHHHHhCcccccHHHHHHH
Q 041642 21 YTRRSANFHPSIWGDRFLSYTSDSMEKDDGSAKHQELKEEIRRMLKAYIN-KPTQNNLDLIDAIQRLGVSYHFESEIDEI 99 (265)
Q Consensus 21 ~~r~~a~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~LkeeVr~~l~~~~~-d~~~~~L~lID~lqRLGI~~hFe~EI~~~ 99 (265)
..|++|||+||+|||+||++.+.....+.+.+|+++||++||+||.+ .. +++ ++|+|||+||||||+|||++||+++
T Consensus 13 ~~~~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~-~~~~~~-~~L~lID~lqRLGi~~hF~~EI~~~ 90 (555)
T 3n0f_A 13 EARRSADYEPNSWDYDFLLSSDTDESIEVYKDKAKKLEAEVRREINN-EKAEFL-TLLELIDNVQRLGLGYRFESDIRRA 90 (555)
T ss_dssp ----CCCCCCCTTCHHHHTCC-----CHHHHHHHHHHHHHHHHHHHC-TTSCHH-HHHHHHHHHHHTTCGGGSHHHHHHH
T ss_pred ccCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHh-cccCHH-HHHHHHHHHHHcCchhhhHHHHHHH
Confidence 36999999999999999986543223457899999999999999975 45 789 9999999999999999999999999
Q ss_pred HHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcCccccccccccccccccccccccchhhHHHHHHHHhhccCCCCchH
Q 041642 100 LGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFKRFKDSDGNFKTSLAKDVGGMLSLYEATHLGVHEENI 179 (265)
Q Consensus 100 L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G~Fk~~l~~Dv~glLsLYeAS~l~~~gE~i 179 (265)
|++||+... |+.+ ...||++|||+|||||||||+||||||++|+|++|+|++++.+||+|||+|||||||++|||+|
T Consensus 91 L~~i~~~~~--~~~~-~~~DL~~~Al~FRLLR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE~i 167 (555)
T 3n0f_A 91 LDRFVSSGG--FDGV-TKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGENI 167 (555)
T ss_dssp HHHHHHTCH--HHHH-TTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHHhhcc--cccc-ccCCHHHHHHHHHHHHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCcHH
Confidence 999997300 0011 2379999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hcCCCChHHHHHHhccCCcccCchhhHHhhcccccccCCcccHHHHHHHHhhhHHHHHHHHH
Q 041642 180 LDEALAFTTSHLESIAA-HQIGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSSHNEALLTFAKLDFNKLQKLHQK 258 (265)
Q Consensus 180 LdeA~~Fs~~~L~~~~~-~~~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~ 258 (265)
||+|+.||+++|++.+. .++ ++|+++|+|||++|||++|||||||+||+.|+++.++|++||||||+|||+||++||+
T Consensus 168 LdeA~~Fs~~~L~~~~~~~~~-~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFN~~Q~~hq~ 246 (555)
T 3n0f_A 168 LDEARVFAISHLKELSEEKIG-KELAEQVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQR 246 (555)
T ss_dssp HHHHHHHHHHHHHTCCHHHHC-HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCC-chHHHHHHHHhcCCcccCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHhHH
Confidence 99999999999999765 566 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 041642 259 ELGDISR 265 (265)
Q Consensus 259 EL~~lsr 265 (265)
||++|+|
T Consensus 247 EL~~lsr 253 (555)
T 3n0f_A 247 DLRETSR 253 (555)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=1.4e-81 Score=624.27 Aligned_cols=238 Identities=34% Similarity=0.531 Sum_probs=194.6
Q ss_pred ccccccCCCCCCCCCccCccccCCCCcchhhHHHHHHHHHHHHHHHHHhccCCccccchhHHHHHHHhCcccccHHHHHH
Q 041642 19 KDYTRRSANFHPSIWGDRFLSYTSDSMEKDDGSAKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRLGVSYHFESEIDE 98 (265)
Q Consensus 19 ~~~~r~~a~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRLGI~~hFe~EI~~ 98 (265)
.+..||+|||+||+||++||++.+.....+.+.+++++||++||+|+.. ..|++ ++|+|||+||||||+|||++||++
T Consensus 31 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~Vr~~~~~-~~d~~-~~l~lID~lqrLGi~~hFe~EI~~ 108 (569)
T 2j5c_A 31 KDRWIRTGGYQPTLWDFSTIQSFDSEYKEEKHLMRAAGMIDQVKMMLQE-EVDSI-RRLELIDDLRRLGISCHFEREIVE 108 (569)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHH-CCCHH-HHHHHHHHHHHHTCGGGGHHHHHH
T ss_pred ccccCCCCCCCCCcCCcccccCCCchhhhHHHHHHHHHHHHHHHHHHhc-cccHH-HHHHHHHHHHhCCchhhhHHHHHH
Confidence 4568999999999999999985432222346789999999999999986 45899 999999999999999999999999
Q ss_pred HHHHHH-hhhccCCCCCCCCCchhhHHHHHHHHhhcCcccccccccccccccc-ccccccchhhHHHHHHHHhhccCCCC
Q 041642 99 ILGKLH-EAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFKRFKDSDG-NFKTSLAKDVGGMLSLYEATHLGVHE 176 (265)
Q Consensus 99 ~L~~i~-~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G-~Fk~~l~~Dv~glLsLYeAS~l~~~g 176 (265)
+|++|| +++. . ...|||+|||+|||||||||+||||||++|||++| +|++++++||+|||+|||||||++||
T Consensus 109 ~L~~i~~~~~~-----~-~~~Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~g 182 (569)
T 2j5c_A 109 ILNSKYYTNNE-----I-DERDLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQG 182 (569)
T ss_dssp HHHHHTTSSCC-----S-CTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhccC-----c-ccCChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCC
Confidence 999999 7531 1 34699999999999999999999999999999999 99999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhhc-CCCChHHHHHHhccCCcccCchhhHHhhcccccccCCcccHHHHHHHHhhhHHHHHH
Q 041642 177 ENILDEALAFTTSHLESIAAHQ-IGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSSHNEALLTFAKLDFNKLQKL 255 (265)
Q Consensus 177 E~iLdeA~~Fs~~~L~~~~~~~-~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~ 255 (265)
|+|||||+.||+++|++.++++ + ++|+++|++||++|||++|||||||+||+.|++++++|++||||||+|||+||++
T Consensus 183 E~iLdeA~~Ft~~~L~~~~~~~~~-~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~ 261 (569)
T 2j5c_A 183 EETLRLARDFATKFLQKRVLVDKD-INLLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQ 261 (569)
T ss_dssp CHHHHHHHHHHHHTTSSCC----C-HHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCC-CcHHHHHHHHhcCccccCcHHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHH
Confidence 9999999999999999988766 6 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhC
Q 041642 256 HQKELGDISR 265 (265)
Q Consensus 256 hq~EL~~lsr 265 (265)
||+||++++|
T Consensus 262 hq~EL~~l~r 271 (569)
T 2j5c_A 262 FQQELKEASR 271 (569)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999975
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=3e-81 Score=619.67 Aligned_cols=241 Identities=38% Similarity=0.624 Sum_probs=206.9
Q ss_pred ccccCCCCCCCCCccCccccCCCCc-chhhHHHHHHHHHHHHHHHHHhccCCccccchhHHHHHHHhCcccccHHHHHHH
Q 041642 21 YTRRSANFHPSIWGDRFLSYTSDSM-EKDDGSAKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRLGVSYHFESEIDEI 99 (265)
Q Consensus 21 ~~r~~a~~~ps~W~~~fl~~~~~~~-~~~~~~~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~ 99 (265)
+.||+|||+||+||++||+ ++... ..+.+.+++++||++||+|+.. ..|++ ++|+|||+||||||+|||++||+++
T Consensus 4 ~~r~~~~~~ps~W~~~fl~-s~~~~~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~-~~l~lvD~lqrLGi~~hF~~EI~~~ 80 (549)
T 1n1b_A 4 QIRRSGNYQPALWDSNYIQ-SLNTPYTEERHLDRKAELIVQVRILLKE-KMEPV-QQLELIHDLKYLGLSDFFQDEIKEI 80 (549)
T ss_dssp -----------CCCHHHHH-HCCCSTTSHHHHHHHHHHHHHHHHHHHS-CCCHH-HHHHHHHHHHHTTCGGGGHHHHHHH
T ss_pred cCCCCCCCCCCCCCCCccc-CCCcchhhhHHHHHHHHHHHHHHHHHhc-ccCHH-HHHHhHHHHHhCCchhhhHHHHHHH
Confidence 4699999999999999994 33222 2347899999999999999986 45899 9999999999999999999999999
Q ss_pred HHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcCcccccccccccccccc-ccccccchhhHHHHHHHHhhccCCCCch
Q 041642 100 LGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFKRFKDSDG-NFKTSLAKDVGGMLSLYEATHLGVHEEN 178 (265)
Q Consensus 100 L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~G-~Fk~~l~~Dv~glLsLYeAS~l~~~gE~ 178 (265)
|++||+++..++.......|||+|||+|||||||||+||||||++|+|++| +|++++++||+|||+|||||||++|||+
T Consensus 81 L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE~ 160 (549)
T 1n1b_A 81 LGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGED 160 (549)
T ss_dssp HHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTCH
T ss_pred HHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCChH
Confidence 999998642100001124699999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh---c-CCCChHHHHHHhccCCcccCchhhHHhhcccccccCCcccHHHHHHHHhhhHHHHH
Q 041642 179 ILDEALAFTTSHLESIAAH---Q-IGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSSHNEALLTFAKLDFNKLQK 254 (265)
Q Consensus 179 iLdeA~~Fs~~~L~~~~~~---~-~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs 254 (265)
|||+|+.||+++|++.+++ + + ++|+++|+|||++|||++|||||||+||+.|++++++|++||||||+|||+||+
T Consensus 161 iL~eA~~Ft~~~L~~~~~~~~~~~~-~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~ 239 (549)
T 1n1b_A 161 TLELAREFATKCLQKKLDEGGNEID-ENLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQA 239 (549)
T ss_dssp HHHHHHHHHHHHHHHHTC------C-HHHHHHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccCC-CcHHHHHHHHhcCchhcCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHH
Confidence 9999999999999999875 4 5 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhC
Q 041642 255 LHQKELGDISR 265 (265)
Q Consensus 255 ~hq~EL~~lsr 265 (265)
+||+||++++|
T Consensus 240 ~hq~El~~l~r 250 (549)
T 1n1b_A 240 THQQELKDLSR 250 (549)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=2.4e-64 Score=514.23 Aligned_cols=195 Identities=32% Similarity=0.506 Sum_probs=179.9
Q ss_pred cCCccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCC---CCCchhhHHHHHHHHhhcCccccccccccc
Q 041642 69 INKPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDN---ENDELYYISLQFRLLRQHGCKISADVFKRF 145 (265)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~---~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F 145 (265)
|.|++ ++|+|||+||||||+|||++||+++|++||++|...|+++. ...||++|||+|||||||||+||||||++|
T Consensus 243 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F 321 (764)
T 3p5p_A 243 SIDLL-ERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNF 321 (764)
T ss_dssp CCHHH-HHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhh
Confidence 57889 99999999999999999999999999999998755455432 136999999999999999999999999999
Q ss_pred ccccccccc---ccchhhHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh---cCCCChHHHHHHhccCCcccCc
Q 041642 146 KDSDGNFKT---SLAKDVGGMLSLYEATHLGVHEENILDEALAFTTSHLESIAAH---QIGSPLAERVKHALIQPIHRGL 219 (265)
Q Consensus 146 ~d~~G~Fk~---~l~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~---~~~~~l~~~V~~aL~~P~h~~l 219 (265)
+|++|+|++ ++.+||+|||+|||||||++|||+|||||+.||+++|++.+++ ++ ++|+++|+|||++|||++|
T Consensus 322 ~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~-~~L~~eV~~aL~~P~~~~l 400 (764)
T 3p5p_A 322 KDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTN-TKLFKEIEYVVEYPWHMSI 400 (764)
T ss_dssp BCTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSS-SHHHHHHHHHHHSCGGGCC
T ss_pred hcCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCC-ccHHHHHHHHhcCchhccc
Confidence 999999997 4689999999999999999999999999999999999998863 45 7899999999999999999
Q ss_pred hhhHHhhcccccccCCcc------------cHHHHHHHHhhhHHHHHHHHHHHHhhhC
Q 041642 220 QRLEARHYIPIYQEQSSH------------NEALLTFAKLDFNKLQKLHQKELGDISR 265 (265)
Q Consensus 220 ~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 265 (265)
||||||+||+.|++++.+ |++||||||+|||+||++||+||++|+|
T Consensus 401 ~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~r 458 (764)
T 3p5p_A 401 PRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTR 458 (764)
T ss_dssp HHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHhHHHhhhhce
Confidence 999999999999988653 9999999999999999999999999985
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=3.8e-64 Score=513.95 Aligned_cols=195 Identities=34% Similarity=0.522 Sum_probs=179.4
Q ss_pred cCCccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCC---CCCchhhHHHHHHHHhhcCccccccccccc
Q 041642 69 INKPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDN---ENDELYYISLQFRLLRQHGCKISADVFKRF 145 (265)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~---~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F 145 (265)
+.|++ ++|+|||+||||||+|||++||+++|+++|++|...|+++. ...||++|||+|||||||||+||||||++|
T Consensus 267 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F 345 (785)
T 3s9v_A 267 PLDLF-ERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTF 345 (785)
T ss_dssp CCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 57889 99999999999999999999999999999998754454332 236999999999999999999999999999
Q ss_pred ccccccccccc---chhhHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh--------cCCCChHHHHHHhccCC
Q 041642 146 KDSDGNFKTSL---AKDVGGMLSLYEATHLGVHEENILDEALAFTTSHLESIAAH--------QIGSPLAERVKHALIQP 214 (265)
Q Consensus 146 ~d~~G~Fk~~l---~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~--------~~~~~l~~~V~~aL~~P 214 (265)
+|++|+|++++ .+||+|||+|||||||++|||+|||||+.||+++|++.+.. ++ ++|+++|+|||++|
T Consensus 346 ~d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~-~~L~~eV~~aL~~P 424 (785)
T 3s9v_A 346 RDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFK-KNIRGEVEYALKYP 424 (785)
T ss_dssp BCTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSS-SCHHHHHHHHHHSC
T ss_pred HhcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccC-CcHHHHHHHHhCCc
Confidence 99999999865 69999999999999999999999999999999999998753 44 78999999999999
Q ss_pred cccCchhhHHhhcccccccCCcc------------cHHHHHHHHhhhHHHHHHHHHHHHhhhC
Q 041642 215 IHRGLQRLEARHYIPIYQEQSSH------------NEALLTFAKLDFNKLQKLHQKELGDISR 265 (265)
Q Consensus 215 ~h~~l~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 265 (265)
||++|||||||+||+.|++++.+ |++||||||+|||+||++||+||++|+|
T Consensus 425 ~~~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 487 (785)
T 3s9v_A 425 WHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRR 487 (785)
T ss_dssp GGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999988754 9999999999999999999999999985
No 9
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=4e-64 Score=515.52 Aligned_cols=195 Identities=37% Similarity=0.576 Sum_probs=177.3
Q ss_pred cCCccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCC---CCCchhhHHHHHHHHhhcCccccccccccc
Q 041642 69 INKPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDN---ENDELYYISLQFRLLRQHGCKISADVFKRF 145 (265)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~---~~~DL~~~AL~FRLLRqhGy~VS~DvF~~F 145 (265)
|.|++ ++|+|||+||||||+|||++||+++|++||++|...|+++. ...||++|||+|||||||||+||||||++|
T Consensus 295 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F 373 (817)
T 3sdr_A 295 PVDLL-ERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNF 373 (817)
T ss_dssp CCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHHcCCCccHhHHHHH
Confidence 57889 99999999999999999999999999999998755455432 136999999999999999999999999999
Q ss_pred ccccccccccc---chhhHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh--------cCCCChHHHHHHhccCC
Q 041642 146 KDSDGNFKTSL---AKDVGGMLSLYEATHLGVHEENILDEALAFTTSHLESIAAH--------QIGSPLAERVKHALIQP 214 (265)
Q Consensus 146 ~d~~G~Fk~~l---~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~--------~~~~~l~~~V~~aL~~P 214 (265)
+|++|+|++++ .+||+|||+|||||||++|||+|||||+.||+++|++.+.. ++ ++|+++|+|||++|
T Consensus 374 ~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~-~~L~~eV~~aL~~P 452 (817)
T 3sdr_A 374 KDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNK-QNLSQEIKYALKTS 452 (817)
T ss_dssp BCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHH-TTHHHHHHHHHHCC
T ss_pred hhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccC-CcHHHHHHHHhcCc
Confidence 99999999865 69999999999999999999999999999999999998752 23 67999999999999
Q ss_pred cccCchhhHHhhcccccccCCcc------------cHHHHHHHHhhhHHHHHHHHHHHHhhhC
Q 041642 215 IHRGLQRLEARHYIPIYQEQSSH------------NEALLTFAKLDFNKLQKLHQKELGDISR 265 (265)
Q Consensus 215 ~h~~l~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 265 (265)
||++|||||||+||+.|++++.+ |++||||||+|||+||++||+||++|+|
T Consensus 453 ~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 515 (817)
T 3sdr_A 453 WHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTS 515 (817)
T ss_dssp STTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccChHHHHHHHHHHhCccchhhhhhcccccccccHHHHHHHHHHHHHHHHHhhhhhhhhce
Confidence 99999999999999999988753 9999999999999999999999999985
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=4e-63 Score=502.11 Aligned_cols=212 Identities=33% Similarity=0.475 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHHHhc----cCCccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCC---CCCchhhH
Q 041642 51 SAKHQELKEEIRRMLKAY----INKPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDN---ENDELYYI 123 (265)
Q Consensus 51 ~~~~e~LkeeVr~~l~~~----~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~---~~~DL~~~ 123 (265)
.+..+.|+..|++..... |.|++ ++|+|||+||||||+|||++||+++|+++|++|...|+++. ...||++|
T Consensus 220 ~~~l~YL~~~v~k~~g~VP~~yP~d~~-e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~t 298 (727)
T 3pya_A 220 SNCLEYLRNAVKRFNGGVPNVFPVDLF-EHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDT 298 (727)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSCCCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHH
Confidence 466778999998876432 57899 99999999999999999999999999999998654444322 23699999
Q ss_pred HHHHHHHhhcCcccccccccccccccccccc---ccchhhHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHhh---
Q 041642 124 SLQFRLLRQHGCKISADVFKRFKDSDGNFKT---SLAKDVGGMLSLYEATHLGVHEENILDEALAFTTSHLESIAAH--- 197 (265)
Q Consensus 124 AL~FRLLRqhGy~VS~DvF~~F~d~~G~Fk~---~l~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~--- 197 (265)
||+|||||||||+||||||++|+ ++|+|++ +..+|++|||+||||||+++|||+|||+|+.||+++|++.+..
T Consensus 299 AL~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~ 377 (727)
T 3pya_A 299 AMAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREEL 377 (727)
T ss_dssp HHHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999 8899984 3468999999999999999999999999999999999998752
Q ss_pred -----cCCCChHHHHHHhccCCcccCchhhHHhhcccccccCCc-------------ccHHHHHHHHhhhHHHHHHHHHH
Q 041642 198 -----QIGSPLAERVKHALIQPIHRGLQRLEARHYIPIYQEQSS-------------HNEALLTFAKLDFNKLQKLHQKE 259 (265)
Q Consensus 198 -----~~~~~l~~~V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~-------------~n~~lLelAklDFn~~Qs~hq~E 259 (265)
++ ++|+++|+|||++|||++|||+||||||+.|+++++ +|++||||||+|||+||++||+|
T Consensus 378 ~dkw~~~-~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~E 456 (727)
T 3pya_A 378 IDKWIIM-KDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLE 456 (727)
T ss_dssp CCSSEEC-SCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccC-CcHHHHHHHHhcCcHhcCChHHHHHHHHHHhccCcchhhhhhhccccccccHHHHHHHHHhHHHHHHHhHHH
Confidence 24 789999999999999999999999999999997654 59999999999999999999999
Q ss_pred HHhhhC
Q 041642 260 LGDISR 265 (265)
Q Consensus 260 L~~lsr 265 (265)
|++|+|
T Consensus 457 L~~lsr 462 (727)
T 3pya_A 457 WDIFQK 462 (727)
T ss_dssp HHHHHH
T ss_pred Hhhhhe
Confidence 999985
No 11
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=97.62 E-value=1.6e-05 Score=82.08 Aligned_cols=45 Identities=31% Similarity=0.487 Sum_probs=27.1
Q ss_pred ccccCCCCCCCCCccCccccC-CCCcchhhHHHHHHHHHHHHHHHHH
Q 041642 21 YTRRSANFHPSIWGDRFLSYT-SDSMEKDDGSAKHQELKEEIRRMLK 66 (265)
Q Consensus 21 ~~r~~a~~~ps~W~~~fl~~~-~~~~~~~~~~~~~e~LkeeVr~~l~ 66 (265)
+.||+|||+||+|+++|+++. +++ ..+.+.+++++|+++||+||.
T Consensus 23 ~~Rrsany~Ps~W~~~~i~sl~~~~-~~~~~~~~~~~Lie~VK~~l~ 68 (817)
T 3sdr_A 23 LIRRTANPHPNVWGYDLVHSLKSPY-IDSSYRERAEVLVSEIKAMLN 68 (817)
T ss_dssp ------------CHHHHHHTCCCGG-GSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCCCCCeeeccCCcc-cchhHHHHHHHHHHHHHHHhc
Confidence 479999999999999999853 344 345788999999999999997
No 12
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=47.14 E-value=10 Score=26.16 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhccCCccccchhHHHHHHHh
Q 041642 52 AKHQELKEEIRRMLKAYINKPTQNNLDLIDAIQRL 86 (265)
Q Consensus 52 ~~~e~LkeeVr~~l~~~~~d~~~~~L~lID~lqRL 86 (265)
+++.-|.+|||..|.. +.|.+ +++.++.+||-|
T Consensus 16 EeIRwlIeE~Rh~Lk~-Tensf-eQItfmqalQLl 48 (58)
T 1pd3_A 16 EEIRWLIEEVRHRLKI-TENSF-EQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHHTCCC-CTTSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-hhchH-HHHHHHHHHHHH
Confidence 4455677888888874 67889 999999888865
No 13
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=42.18 E-value=90 Score=22.14 Aligned_cols=61 Identities=10% Similarity=0.167 Sum_probs=34.5
Q ss_pred CccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCCCCCchhhHHHHHHHHh-hcCcccccc
Q 041642 71 KPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDNENDELYYISLQFRLLR-QHGCKISAD 140 (265)
Q Consensus 71 d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLR-qhGy~VS~D 140 (265)
..+ ..=++...+.++|+. ++|+++++..+=.. |++.-+.++.. .+|.-.-.+ +.|+.++..
T Consensus 25 G~I-~~~el~~~l~~~g~~---~~~~~~i~~~~D~d----~dG~i~~~EF~-~~~~~~~~~~~~g~~lP~~ 86 (95)
T 1c07_A 25 GFV-SGLEVREIFLKTGLP---STLLAHIWSLCDTK----DCGKLSKDQFA-LAFHLISQKLIKGIDPPHV 86 (95)
T ss_dssp SEE-CHHHHHHHHHTTTCC---HHHHHHHHHHHCTT----CSSSEETTTHH-HHHHHHHHHHTSCCCCCSS
T ss_pred CcE-eHHHHHHHHHHcCCC---HHHHHHHHHHHCCC----CCCcCCHHHHH-HHHHHHHHHHHcCCCCCCc
Confidence 344 666788889999976 57777776644211 12111233443 333333334 799988754
No 14
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=41.93 E-value=13 Score=38.27 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=16.1
Q ss_pred CCCCCCCccCcccc-CCCCcchhhHHHHHHHHHHHHHHHHH
Q 041642 27 NFHPSIWGDRFLSY-TSDSMEKDDGSAKHQELKEEIRRMLK 66 (265)
Q Consensus 27 ~~~ps~W~~~fl~~-~~~~~~~~~~~~~~e~LkeeVr~~l~ 66 (265)
+|+|++|++.++.. .++......+.++++.|+++||+||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 45 (785)
T 3s9v_A 5 EFPPGFWKDDLIDSLTSSHKVAASDEKRIETLISEIKNMFR 45 (785)
T ss_dssp ----------------------CCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcccccccCCCccccCcchhHHHHHHHHHHHHHhh
Confidence 68999999999874 23332223567888999999999995
No 15
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=29.02 E-value=1.5e+02 Score=20.73 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=40.3
Q ss_pred HHHHHHHHHhc---cCCccccchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcC
Q 041642 58 KEEIRRMLKAY---INKPTQNNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHG 134 (265)
Q Consensus 58 keeVr~~l~~~---~~d~~~~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhG 134 (265)
+++++.+|..- .+..+ ..=++...+.++|++ ++|+++++..+-.. |++.-+.++. ..+|.-.-.++.|
T Consensus 8 ~~~~~~~F~~~D~d~dG~I-~~~el~~~l~~~g~~---~~~~~~i~~~~D~d----~dG~i~~~EF-~~~~~~~~~~~~g 78 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFI-PGSAAKEFFTKSKLP---ILELSHIWELSDFD----KDGALTLDEF-CAAFHLVVARKNG 78 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEE-EHHHHHHHHHHHSSC---HHHHHHHHHHHCTT----CSSEEEHHHH-HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCCC---HHHHHHHHHHHCCC----CCCCCCHHHH-HHHHHHHHHHHcC
Confidence 34566666532 12334 667788889999976 56777766544111 1111011222 2334333456889
Q ss_pred cccccc
Q 041642 135 CKISAD 140 (265)
Q Consensus 135 y~VS~D 140 (265)
+.++..
T Consensus 79 ~~lp~~ 84 (92)
T 1fi6_A 79 YDLPEK 84 (92)
T ss_dssp CCCCCC
T ss_pred CCCCcc
Confidence 998764
No 16
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=26.69 E-value=1.8e+02 Score=20.90 Aligned_cols=61 Identities=16% Similarity=0.301 Sum_probs=40.4
Q ss_pred cchhHHHHHHHhCcccccHHHHHHHHHHHHhhhccCCCCCCCCCchhhHHHHHHHHhhcCccccccccc
Q 041642 75 NNLDLIDAIQRLGVSYHFESEIDEILGKLHEAHQDCGLGDNENDELYYISLQFRLLRQHGCKISADVFK 143 (265)
Q Consensus 75 ~~L~lID~lqRLGI~~hFe~EI~~~L~~i~~~~~~~g~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~ 143 (265)
..=++...+.++|++ ++|+++++..+-.. |++. ..-+=...+|.-.-+.|+|+.++.+.+.
T Consensus 29 s~~el~~~l~~~~l~---~~~l~~i~~~~D~d----~dG~-i~~~EF~~~~~~~~~~~~g~~~~~~~l~ 89 (99)
T 1qjt_A 29 LALDAAAFLKKSGLP---DLILGKIWDLADTD----GKGV-LSKQEFFVALRLVACAQNGLEVSLSSLS 89 (99)
T ss_dssp CSHHHHHHHHTSSSC---HHHHHHHHHHHCCS----SSSS-CCSHHHHHHHHHHHHHTTTCCSSGGGCS
T ss_pred CHHHHHHHHHHcCCC---HHHHHHHHHHHCCC----CCCc-CCHHHHHHHHHHHHHHHcCCCCChhhcc
Confidence 566788889999986 67777776654211 1222 1123346677777889999999977654
No 17
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=23.34 E-value=55 Score=22.56 Aligned_cols=25 Identities=20% Similarity=0.181 Sum_probs=22.1
Q ss_pred cchhHHHHHHHhCcccccHHHHHHHHHH
Q 041642 75 NNLDLIDAIQRLGVSYHFESEIDEILGK 102 (265)
Q Consensus 75 ~~L~lID~lqRLGI~~hFe~EI~~~L~~ 102 (265)
+.+.||...+++|++- +||++.|..
T Consensus 14 ewl~LI~~Ak~lGlsl---eEIrefL~l 38 (57)
T 1b0n_B 14 EWVELMVEAKEANISP---EEIRKYLLL 38 (57)
T ss_dssp HHHHHHHHHHHTTCCH---HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCH---HHHHHHHHH
Confidence 7899999999999985 899988853
Done!