Your job contains 1 sequence.
>041647
MALTHALTSVWSVNKTDVVNLGSTSGIHNDPEQLLRARVSLVLYLNTKRRSAKSFQRQNN
LLFKTQSAPVSLSHIMDASMEDLARCPGIVERKVKCLYDTFHEPFKPVVSRHPPIPETPS
LKDVEPSSVNESALSAAFANYADKMGEKKNSSSQKQETETRIPENRSSILAKEAMAAELT
HSLTMHIYRLLCPPHLDDVGGVLAITISMDSLKLHS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041647
(216 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096329 - symbol:ERCC1 species:3702 "Arabidops... 223 1.3e-24 2
ZFIN|ZDB-GENE-040426-2606 - symbol:ercc1 "excision repair... 91 0.00084 2
>TAIR|locus:2096329 [details] [associations]
symbol:ERCC1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0010332 "response to gamma radiation"
evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0006294
"nucleotide-excision repair, preincision complex assembly"
evidence=IMP] [GO:0017108 "5'-flap endonuclease activity"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010213 "non-photoreactive DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IMP]
InterPro:IPR003583 InterPro:IPR004579 Pfam:PF03834 ProDom:PD013585
SMART:SM00278 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003684 GO:GO:0010332 InterPro:IPR011335 SUPFAM:SSF52980
GO:GO:0000724 GO:GO:0010224 EMBL:AC009177 GO:GO:0017108
InterPro:IPR010994 SUPFAM:SSF47781 EMBL:AF276082 EMBL:AY050335
EMBL:AY116935 EMBL:AY088915 IPI:IPI00546398 RefSeq:NP_187172.1
UniGene:At.15981 ProteinModelPortal:Q9MA98 SMR:Q9MA98 IntAct:Q9MA98
STRING:Q9MA98 PaxDb:Q9MA98 PRIDE:Q9MA98 EnsemblPlants:AT3G05210.1
GeneID:819685 KEGG:ath:AT3G05210 GeneFarm:4450 TAIR:At3g05210
eggNOG:COG5241 HOGENOM:HOG000037440 InParanoid:Q9MA98 KO:K10849
OMA:CHVDVED PhylomeDB:Q9MA98 ProtClustDB:CLSN2684472
Genevestigator:Q9MA98 GermOnline:AT3G05210 GO:GO:0010213
GO:GO:0006294 TIGRFAMs:TIGR00597 Uniprot:Q9MA98
Length = 410
Score = 223 (83.6 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 60/140 (42%), Positives = 77/140 (55%)
Query: 2 ALTHALTSVWSVNKTDVVNLGSTSGIH-NDPEQLLRARVSLVLYLNTKRRSAKSFQRQNN 60
AL H T + + + T+ T ++ N P L++ ++ YL+ S S + N
Sbjct: 214 ALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTD-YLSRLNHSLTSIRHVNK 272
Query: 61 LLFKTQSAPV-SLSHIMDASMEDLARCPGIVERKVKCLYDTFHEPFKPVVSRHP-----P 114
T + SL+HI+DASMEDLARCPGI ERKVK LYDTFHEPFK S +P P
Sbjct: 273 SDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFKRATSSYPSVVEPP 332
Query: 115 IPETPSLKDV---EPSSVNE 131
IPE P KDV EP +E
Sbjct: 333 IPEAPVEKDVNSEEPVEEDE 352
Score = 82 (33.9 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 122 KDVEPSSVNESALSAAFANYADKMGEKKNSSSQKQET 158
K+ EP ++ALSA FA Y+D++ +KK +K T
Sbjct: 364 KEPEPEKTVKTALSAVFARYSDRLSKKKEKQKEKDTT 400
>ZFIN|ZDB-GENE-040426-2606 [details] [associations]
symbol:ercc1 "excision repair cross-complementing
rodent repair deficiency, complementation group 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003583 InterPro:IPR004579 Pfam:PF00633 Pfam:PF03834
ProDom:PD013585 SMART:SM00278 ZFIN:ZDB-GENE-040426-2606
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004519 InterPro:IPR010994 SUPFAM:SSF47781
KO:K10849 TIGRFAMs:TIGR00597 CTD:2067 GeneTree:ENSGT00390000011275
HOVERGEN:HBG051497 EMBL:BX571724 EMBL:BC066697 EMBL:BC152194
IPI:IPI00500105 RefSeq:NP_001096608.1 UniGene:Dr.75544 SMR:Q6NY87
STRING:Q6NY87 Ensembl:ENSDART00000041751 GeneID:100001425
KEGG:dre:100001425 InParanoid:Q6NY87 NextBio:20785034
Uniprot:Q6NY87
Length = 342
Score = 91 (37.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 71 SLSHIMDASMEDLARCPGIVERKVKCLYDTFHEPF 105
SL I+ AS E+L CPG+ +K + LYD H+PF
Sbjct: 300 SLEGIIKASKEELVLCPGLGPQKARRLYDVLHQPF 334
Score = 56 (24.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 3 LTHALTSVWSVNKTDVVNLGST 24
+T LT+V SVNKTD + L ST
Sbjct: 276 VTDCLTTVKSVNKTDAMTLLST 297
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.127 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 216 216 0.00088 112 3 11 23 0.40 33
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 590 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.06u 0.14s 24.20t Elapsed: 00:00:01
Total cpu time: 24.06u 0.15s 24.21t Elapsed: 00:00:01
Start: Fri May 10 23:14:22 2013 End: Fri May 10 23:14:23 2013