BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041651
(557 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1
Length = 680
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 184/450 (40%), Gaps = 53/450 (11%)
Query: 113 MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172
+ + D +C S+ NG +V +GG ND + + D WI P + R Y +
Sbjct: 262 VTKHDMFCPGISMDGNGQIVVTGG-ND----AKKTSLYDSSSDSWIPGPD-MQVARGYQS 315
Query: 173 NQILPDGRIIIIGGRR-----QFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP 226
+ + DGR+ IGG + N E Y P S S P + L + LY
Sbjct: 316 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ----GLY- 370
Query: 227 FVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGS 286
D + ++F + +F + + Y D ++ S+ + D G+
Sbjct: 371 ----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 426
Query: 287 T----SVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVM 342
+V+ +I+ GG+ + + AT I + G + N + + R
Sbjct: 427 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTF 482
Query: 343 GDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYH 402
++LP+G I G + G +E + P+ P IY P + T F P++ R+YH
Sbjct: 483 HTSVVLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQDT---FYKQNPNSIVRVYH 537
Query: 403 SSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL--SAEYATVRPKILSLN 460
S ++LL DGRV GG + ++P YL S RPKI +
Sbjct: 538 SISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI-TRT 590
Query: 461 ETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVY 520
T K ++ S + +S LI TH+ +QR + L L + SY +
Sbjct: 591 STQSVKVGGRITISTDSSIS----KASLIRYGTATHTVNTDQRRIPL-TLTNNGGNSYSF 645
Query: 521 HLAAVAPSTAEIAPPGYYLLFVVH-AEIPS 549
+ PS + +A PGY++LFV++ A +PS
Sbjct: 646 QV----PSDSGVALPGYWMLFVMNSAGVPS 671
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 /
FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1
Length = 680
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 184/450 (40%), Gaps = 53/450 (11%)
Query: 113 MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172
+ + D +C S+ NG +V +GG ND + + D WI P + R Y +
Sbjct: 262 VTKHDMFCPGISMDGNGQIVVTGG-ND----AKKTSLYDSSSDSWIPGPD-MQVARGYQS 315
Query: 173 NQILPDGRIIIIGGRR-----QFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP 226
+ + DGR+ IGG + N E Y P S S P + L + LY
Sbjct: 316 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ----GLY- 370
Query: 227 FVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGS 286
D + ++F + +F + + Y D ++ S+ + D G+
Sbjct: 371 ----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 426
Query: 287 T----SVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVM 342
+V+ +I+ GG+ + + AT I + G + N + + R
Sbjct: 427 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTF 482
Query: 343 GDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYH 402
++LP+G I G + G +E + P+ P IY P + T F P++ R+YH
Sbjct: 483 HTSVVLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQDT---FYKQNPNSIVRVYH 537
Query: 403 SSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL--SAEYATVRPKILSLN 460
S ++LL DGRV GG + ++P YL S RPKI +
Sbjct: 538 SISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI-TRT 590
Query: 461 ETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVY 520
T K ++ S + + + LI TH+ +QR + L L + SY +
Sbjct: 591 STQSVKVGGRITISTD----SSITKASLIRYGTATHTVNTDQRRIPL-TLTNNGGNSYSF 645
Query: 521 HLAAVAPSTAEIAPPGYYLLFVVH-AEIPS 549
+ PS + +A PGY++LFV++ A +PS
Sbjct: 646 QV----PSDSGVALPGYWMLFVMNSAGVPS 671
>sp|P23654|NRT_DROME Neurotactin OS=Drosophila melanogaster GN=Nrt PE=1 SV=3
Length = 846
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 97 AHSILYDVATNAYRPLMVQTDTWCSSGS-VLPNGTLVQSGGYNDGDHVVRTFTPCDDDQC 155
A + L + N+ + + T W SSGS +LP L +SG N + ++ T C D QC
Sbjct: 549 AGATLVTLLVNSQKVKGLYTRAWASSGSAILPGKPLSESGKQN--EQLMATLE-CADIQC 605
Query: 156 DWIELPQHLSERRWYAT 172
L + SER W AT
Sbjct: 606 ----LREASSERLWAAT 618
>sp|Q8BWA5|KLH31_MOUSE Kelch-like protein 31 OS=Mus musculus GN=Klhl31 PE=1 SV=1
Length = 634
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 105 ATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHL 164
+TN ++P C S + +G ++ +GGY G R+ D W ELPQ
Sbjct: 442 STNQWQPKAPLEVARCCHASAVADGRVIVTGGY-IGSAYSRSVCAYDPALDAWQELPQLS 500
Query: 165 SERRWYATNQILPDGRIIIIGGRR 188
+ R W+ + R+ ++GG +
Sbjct: 501 TPRGWHCA--VALGDRLYVMGGSQ 522
>sp|A8I464|EFTS_AZOC5 Elongation factor Ts OS=Azorhizobium caulinodans (strain ATCC 43989
/ DSM 5975 / ORS 571) GN=tsf PE=3 SV=1
Length = 307
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 428 NVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVS 485
V TD S+EA + + E TV K+ +L TIG T R SV +SAGV++
Sbjct: 98 KVALNTDGSIEAVAAAHFPGESVTVADKLATLIATIGENMTL--RRSVRLTVSAGVIA 153
>sp|Q9H511|KLH31_HUMAN Kelch-like protein 31 OS=Homo sapiens GN=KLHL31 PE=2 SV=1
Length = 634
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 105 ATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGY--NDGDHVVRTFTPCDDDQCDWIELPQ 162
+TN ++P C S + +G ++ +GGY N V + P D W ELP
Sbjct: 442 STNQWQPKTPLEVARCCHASAVADGRVLVTGGYIANAYSRSVCAYDPASD---SWQELPN 498
Query: 163 HLSERRWYATNQILPDGRIIIIGGRR 188
+ R W+ + R+ ++GG +
Sbjct: 499 LSTPRGWHCA--VTLSDRVYVMGGSQ 522
>sp|Q6NG90|AMPA_CORDI Probable cytosol aminopeptidase OS=Corynebacterium diphtheriae
(strain ATCC 700971 / NCTC 13129 / Biotype gravis)
GN=pepA PE=3 SV=1
Length = 500
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 298 GAQNASFALATQGV-----FIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGD 352
GAQ + T GV F +++ GR V P+W M PLP +G+ + P D
Sbjct: 377 GAQIVALGDRTSGVMGSDEFRDSVALTGRTV---GEPAWAM---PLPEEIGEDVKSPVAD 430
Query: 353 VIIINGAQLG---TAGWELA 369
+ + G++ G AGW L+
Sbjct: 431 IRNVTGSRSGGMMAAGWYLS 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,039,007
Number of Sequences: 539616
Number of extensions: 9451120
Number of successful extensions: 17919
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 17911
Number of HSP's gapped (non-prelim): 11
length of query: 557
length of database: 191,569,459
effective HSP length: 123
effective length of query: 434
effective length of database: 125,196,691
effective search space: 54335363894
effective search space used: 54335363894
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)