Query 041651
Match_columns 557
No_of_seqs 351 out of 1950
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:50:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041651hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 1.7E-72 5.7E-77 634.5 41.3 457 29-557 167-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 5.8E-34 2E-38 289.0 30.4 275 54-413 10-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 4.2E-34 1.4E-38 291.4 28.5 278 47-407 12-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 6.6E-33 2.3E-37 281.7 28.1 267 59-410 11-296 (306)
5 2vpj_A Kelch-like protein 12; 100.0 2E-32 6.8E-37 277.3 27.5 269 58-407 13-299 (301)
6 2woz_A Kelch repeat and BTB do 100.0 1.4E-31 5E-36 273.7 24.9 263 99-417 26-314 (318)
7 1zgk_A Kelch-like ECH-associat 100.0 6.5E-31 2.2E-35 267.8 29.5 256 119-445 15-288 (308)
8 4asc_A Kelch repeat and BTB do 100.0 9.7E-32 3.3E-36 274.6 21.0 284 28-419 13-306 (315)
9 2xn4_A Kelch-like protein 2; s 100.0 1.1E-30 3.7E-35 264.8 28.2 250 127-445 14-277 (302)
10 3ii7_A Kelch-like protein 7; p 100.0 1.7E-30 5.9E-35 263.9 27.8 250 128-445 11-273 (306)
11 2vpj_A Kelch-like protein 12; 100.0 1.1E-29 3.9E-34 257.0 28.8 248 127-445 13-279 (301)
12 2uvk_A YJHT; unknown function, 100.0 3.3E-30 1.1E-34 267.5 23.1 293 43-422 3-328 (357)
13 4asc_A Kelch repeat and BTB do 100.0 4.2E-30 1.4E-34 262.5 22.0 252 99-445 15-278 (315)
14 2woz_A Kelch repeat and BTB do 100.0 1E-27 3.5E-32 245.1 23.7 251 128-446 15-289 (318)
15 1k3i_A Galactose oxidase precu 100.0 6.4E-28 2.2E-32 271.2 23.3 293 99-444 168-497 (656)
16 2zwa_A Leucine carboxyl methyl 99.9 1.2E-25 4.2E-30 254.1 26.8 268 39-420 378-675 (695)
17 2uvk_A YJHT; unknown function, 99.9 1.9E-25 6.4E-30 231.7 20.3 272 28-396 31-352 (357)
18 2zwa_A Leucine carboxyl methyl 99.9 3.2E-22 1.1E-26 226.1 22.1 238 108-445 378-636 (695)
19 4ery_A WD repeat-containing pr 98.1 0.0042 1.4E-07 61.2 29.1 247 99-419 47-299 (312)
20 1got_B GT-beta; complex (GTP-b 98.0 0.0018 6E-08 65.3 25.5 252 98-421 78-334 (340)
21 3ow8_A WD repeat-containing pr 97.9 0.0097 3.3E-07 59.5 28.7 244 99-420 60-311 (321)
22 3dsm_A Uncharacterized protein 97.9 0.0062 2.1E-07 61.3 27.4 269 97-443 17-301 (328)
23 3zwl_B Eukaryotic translation 97.9 0.0072 2.5E-07 60.1 26.7 270 99-421 56-337 (369)
24 1k8k_C P40, ARP2/3 complex 41 97.9 0.0049 1.7E-07 61.7 25.6 137 98-250 31-172 (372)
25 1gxr_A ESG1, transducin-like e 97.9 0.0051 1.8E-07 60.5 25.0 245 99-420 74-327 (337)
26 2pbi_B Guanine nucleotide-bind 97.8 0.013 4.5E-07 59.4 26.7 255 98-421 87-348 (354)
27 3no2_A Uncharacterized protein 97.7 0.0045 1.5E-07 61.0 22.1 207 98-357 16-230 (276)
28 3bws_A Protein LP49; two-domai 97.7 0.0099 3.4E-07 61.2 25.3 133 99-256 146-297 (433)
29 3vgz_A Uncharacterized protein 97.7 0.029 9.8E-07 55.7 27.8 248 98-419 70-334 (353)
30 3hfq_A Uncharacterized protein 97.7 0.0044 1.5E-07 62.1 21.7 147 98-255 19-176 (347)
31 2ynn_A Coatomer subunit beta'; 97.7 0.0075 2.6E-07 59.6 23.0 134 98-253 36-174 (304)
32 1vyh_C Platelet-activating fac 97.7 0.0072 2.5E-07 62.7 23.7 135 99-256 132-270 (410)
33 1l0q_A Surface layer protein; 97.6 0.024 8.2E-07 57.4 26.6 136 98-258 13-154 (391)
34 3no2_A Uncharacterized protein 97.6 0.007 2.4E-07 59.6 21.5 220 128-418 4-231 (276)
35 4aez_A CDC20, WD repeat-contai 97.6 0.02 6.8E-07 58.8 24.9 251 98-421 114-371 (401)
36 3fm0_A Protein CIAO1; WDR39,SG 97.5 0.014 4.9E-07 58.7 23.0 139 99-255 40-185 (345)
37 3vl1_A 26S proteasome regulato 97.5 0.0094 3.2E-07 61.0 21.9 137 98-258 79-219 (420)
38 1gxr_A ESG1, transducin-like e 97.5 0.02 6.8E-07 56.1 23.4 224 122-420 56-286 (337)
39 3vl1_A 26S proteasome regulato 97.5 0.051 1.7E-06 55.4 27.3 88 98-195 120-208 (420)
40 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.087 3E-06 53.3 28.6 244 99-418 115-367 (376)
41 3iz6_a 40S ribosomal protein R 97.5 0.055 1.9E-06 55.2 26.5 262 98-421 89-366 (380)
42 2hes_X YDR267CP; beta-propelle 97.4 0.021 7E-07 57.1 22.6 143 99-255 36-188 (330)
43 3u4y_A Uncharacterized protein 97.4 0.035 1.2E-06 54.7 23.7 129 98-252 21-161 (331)
44 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.077 2.6E-06 55.0 27.2 243 98-421 180-429 (445)
45 4e54_B DNA damage-binding prot 97.4 0.024 8.3E-07 59.0 22.9 90 99-195 144-236 (435)
46 3ei3_B DNA damage-binding prot 97.3 0.046 1.6E-06 55.2 23.9 133 99-251 98-236 (383)
47 1rwi_B Serine/threonine-protei 97.3 0.1 3.5E-06 49.6 25.2 48 99-150 48-95 (270)
48 3ow8_A WD repeat-containing pr 97.3 0.11 3.6E-06 51.8 26.0 136 98-256 103-242 (321)
49 1erj_A Transcriptional repress 97.3 0.025 8.6E-07 58.0 21.7 49 99-150 147-195 (393)
50 1got_B GT-beta; complex (GTP-b 97.2 0.089 3E-06 52.6 24.6 225 124-420 62-291 (340)
51 1l0q_A Surface layer protein; 97.2 0.1 3.4E-06 52.7 25.2 136 98-258 55-196 (391)
52 2z2n_A Virginiamycin B lyase; 97.2 0.17 5.7E-06 48.6 28.9 131 99-255 38-174 (299)
53 3u4y_A Uncharacterized protein 97.2 0.12 4E-06 50.9 24.8 186 27-254 19-210 (331)
54 3jrp_A Fusion protein of prote 97.2 0.015 5.2E-07 58.0 18.5 89 99-195 35-130 (379)
55 2ymu_A WD-40 repeat protein; u 97.2 0.081 2.8E-06 56.5 25.2 241 98-420 326-570 (577)
56 1p22_A F-BOX/WD-repeat protein 97.2 0.094 3.2E-06 54.3 24.9 135 99-258 155-292 (435)
57 3dwl_C Actin-related protein 2 97.2 0.002 6.8E-08 65.2 11.6 49 99-150 35-85 (377)
58 2qc5_A Streptogramin B lactona 97.2 0.19 6.4E-06 48.3 28.8 239 99-418 43-290 (300)
59 3scy_A Hypothetical bacterial 97.2 0.1 3.6E-06 52.2 24.4 95 98-195 30-125 (361)
60 1ri6_A Putative isomerase YBHE 97.2 0.14 4.6E-06 50.2 24.7 141 99-255 17-165 (343)
61 2aq5_A Coronin-1A; WD40 repeat 97.2 0.032 1.1E-06 57.0 20.8 233 123-419 87-333 (402)
62 1pgu_A Actin interacting prote 97.1 0.043 1.5E-06 58.9 22.4 251 99-421 41-319 (615)
63 2pbi_B Guanine nucleotide-bind 97.1 0.11 3.7E-06 52.5 24.0 232 123-420 70-305 (354)
64 3mkq_A Coatomer beta'-subunit; 97.1 0.075 2.6E-06 59.5 24.8 134 98-253 36-174 (814)
65 1nr0_A Actin interacting prote 97.1 0.12 4.1E-06 56.4 25.9 137 98-255 213-359 (611)
66 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.0078 2.7E-07 60.7 14.8 61 345-421 156-216 (345)
67 3v7d_B Cell division control p 97.1 0.15 5E-06 53.0 25.1 249 99-418 144-410 (464)
68 4g56_B MGC81050 protein; prote 97.0 0.12 4.2E-06 52.2 23.5 226 123-421 100-334 (357)
69 4gga_A P55CDC, cell division c 97.0 0.069 2.4E-06 55.1 22.1 133 98-253 126-263 (420)
70 3hfq_A Uncharacterized protein 97.0 0.093 3.2E-06 52.2 22.1 133 32-195 22-167 (347)
71 4h5i_A Guanine nucleotide-exch 97.0 0.21 7.3E-06 50.6 25.1 234 125-421 79-334 (365)
72 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.21 7E-06 51.7 25.4 237 99-420 141-381 (445)
73 3iz6_a 40S ribosomal protein R 97.0 0.12 4.2E-06 52.5 23.2 239 122-421 71-320 (380)
74 3scy_A Hypothetical bacterial 97.0 0.16 5.5E-06 50.8 23.5 190 34-255 35-246 (361)
75 3odt_A Protein DOA1; ubiquitin 97.0 0.3 1E-05 47.0 26.1 90 98-195 40-129 (313)
76 3sfz_A APAF-1, apoptotic pepti 96.9 0.18 6.3E-06 59.5 27.3 252 99-421 639-904 (1249)
77 2pm7_B Protein transport prote 96.9 0.18 6.3E-06 49.2 23.1 89 99-195 33-128 (297)
78 3fvz_A Peptidyl-glycine alpha- 96.9 0.39 1.3E-05 47.7 25.9 148 98-258 70-234 (329)
79 2ymu_A WD-40 repeat protein; u 96.9 0.22 7.7E-06 53.0 25.5 243 98-420 285-529 (577)
80 3jro_A Fusion protein of prote 96.9 0.013 4.4E-07 66.1 16.2 89 99-195 33-128 (753)
81 3dm0_A Maltose-binding peripla 96.9 0.1 3.6E-06 57.7 23.4 50 98-150 453-502 (694)
82 1r5m_A SIR4-interacting protei 96.9 0.07 2.4E-06 53.9 20.4 134 99-255 132-282 (425)
83 2ynn_A Coatomer subunit beta'; 96.9 0.057 2E-06 53.1 19.1 225 123-421 19-250 (304)
84 3dsm_A Uncharacterized protein 96.9 0.23 7.8E-06 49.6 23.6 216 141-418 16-244 (328)
85 3mmy_A MRNA export factor; mRN 96.9 0.36 1.2E-05 47.4 24.9 87 99-195 66-156 (368)
86 1r5m_A SIR4-interacting protei 96.8 0.23 8E-06 50.0 23.7 64 122-195 113-176 (425)
87 1ri6_A Putative isomerase YBHE 96.8 0.26 8.9E-06 48.1 23.3 92 99-195 62-156 (343)
88 3v7d_B Cell division control p 96.8 0.45 1.5E-05 49.2 26.2 215 98-384 184-422 (464)
89 3v9f_A Two-component system se 96.8 1 3.5E-05 50.5 34.0 254 99-419 385-647 (781)
90 1nr0_A Actin interacting prote 96.8 0.22 7.5E-06 54.3 24.4 220 99-384 41-271 (611)
91 3sfz_A APAF-1, apoptotic pepti 96.7 0.087 3E-06 62.3 22.4 246 99-421 985-1240(1249)
92 3frx_A Guanine nucleotide-bind 96.7 0.25 8.4E-06 48.8 22.5 50 98-150 88-137 (319)
93 4ggc_A P55CDC, cell division c 96.7 0.49 1.7E-05 45.6 23.8 132 99-253 47-183 (318)
94 4ery_A WD repeat-containing pr 96.7 0.53 1.8E-05 45.8 29.1 139 98-258 88-230 (312)
95 1nir_A Nitrite reductase; hemo 96.6 0.11 3.8E-06 56.2 20.3 87 98-195 160-253 (543)
96 4aez_A CDC20, WD repeat-contai 96.6 0.63 2.2E-05 47.3 25.1 137 98-258 157-300 (401)
97 3vgz_A Uncharacterized protein 96.6 0.61 2.1E-05 45.7 24.4 123 124-258 47-180 (353)
98 3bws_A Protein LP49; two-domai 96.6 0.21 7.3E-06 51.0 21.5 138 98-258 192-341 (433)
99 1vyh_C Platelet-activating fac 96.6 0.49 1.7E-05 48.6 24.1 87 99-195 174-261 (410)
100 2pm9_A Protein WEB1, protein t 96.5 0.51 1.7E-05 47.6 23.8 58 345-421 268-328 (416)
101 3k26_A Polycomb protein EED; W 96.5 0.35 1.2E-05 47.5 22.1 90 98-195 96-188 (366)
102 1q7f_A NHL, brain tumor CG1071 96.5 0.56 1.9E-05 45.0 23.0 222 123-417 35-268 (286)
103 4gqb_B Methylosome protein 50; 96.5 0.18 6.3E-06 50.8 20.1 50 98-150 104-157 (344)
104 1sq9_A Antiviral protein SKI8; 96.5 0.46 1.6E-05 47.6 23.2 149 99-258 38-223 (397)
105 1k8k_C P40, ARP2/3 complex 41 96.5 0.096 3.3E-06 52.1 17.4 57 123-186 14-71 (372)
106 3i2n_A WD repeat-containing pr 96.5 0.19 6.6E-06 49.4 19.5 142 98-255 45-203 (357)
107 2ojh_A Uncharacterized protein 96.3 0.58 2E-05 44.1 21.3 82 98-188 23-105 (297)
108 4aow_A Guanine nucleotide-bind 96.3 0.91 3.1E-05 44.1 23.9 83 99-189 63-150 (340)
109 4g56_B MGC81050 protein; prote 96.2 0.34 1.2E-05 48.8 20.2 126 121-258 46-177 (357)
110 4a11_B DNA excision repair pro 96.2 0.16 5.5E-06 50.9 17.7 89 100-195 26-127 (408)
111 2xbg_A YCF48-like protein; pho 96.2 1.2 4E-05 44.4 24.7 239 107-419 25-269 (327)
112 3bg1_A Protein SEC13 homolog; 96.2 0.28 9.4E-06 48.4 18.7 90 98-195 36-132 (316)
113 1jmx_B Amine dehydrogenase; ox 96.1 1 3.6E-05 43.9 22.6 141 98-258 22-182 (349)
114 2z2n_A Virginiamycin B lyase; 96.1 1 3.5E-05 42.9 26.4 174 29-255 37-216 (299)
115 2pm9_A Protein WEB1, protein t 96.1 0.32 1.1E-05 49.1 19.2 142 98-258 137-301 (416)
116 2xzm_R RACK1; ribosome, transl 96.1 1.1 3.7E-05 44.5 22.8 50 98-150 99-148 (343)
117 2dg1_A DRP35, lactonase; beta 96.1 1.2 4.2E-05 43.5 24.8 83 99-185 68-152 (333)
118 3lrv_A PRE-mRNA-splicing facto 96.0 0.63 2.2E-05 46.1 20.6 59 123-188 131-191 (343)
119 2pm7_B Protein transport prote 96.0 0.65 2.2E-05 45.1 20.2 111 123-252 15-133 (297)
120 1yfq_A Cell cycle arrest prote 95.9 1.4 4.8E-05 42.8 26.6 87 99-195 35-127 (342)
121 3mkq_A Coatomer beta'-subunit; 95.9 1.3 4.5E-05 49.2 24.8 140 98-258 78-224 (814)
122 3q7m_A Lipoprotein YFGL, BAMB; 95.9 1.7 5.7E-05 43.6 26.1 77 99-185 65-150 (376)
123 1q7f_A NHL, brain tumor CG1071 95.9 1.3 4.5E-05 42.3 25.9 135 99-254 53-197 (286)
124 3ei3_B DNA damage-binding prot 95.8 1 3.6E-05 45.0 21.3 136 98-253 142-284 (383)
125 2hqs_A Protein TOLB; TOLB, PAL 95.8 0.7 2.4E-05 47.7 20.3 80 97-183 159-238 (415)
126 2xbg_A YCF48-like protein; pho 95.7 1.8 6.3E-05 43.0 28.2 237 107-419 66-312 (327)
127 3jrp_A Fusion protein of prote 95.7 0.17 5.8E-06 50.2 14.7 58 350-421 171-231 (379)
128 4e54_B DNA damage-binding prot 95.6 2 6.8E-05 44.1 23.3 134 98-254 188-330 (435)
129 1sq9_A Antiviral protein SKI8; 95.6 0.8 2.7E-05 45.8 19.5 146 99-258 93-274 (397)
130 3i2n_A WD repeat-containing pr 95.5 0.26 8.8E-06 48.5 15.3 68 123-195 24-95 (357)
131 3dwl_C Actin-related protein 2 95.5 0.064 2.2E-06 53.9 10.9 59 123-188 17-76 (377)
132 1p22_A F-BOX/WD-repeat protein 95.4 1.6 5.6E-05 44.7 21.7 136 98-258 194-332 (435)
133 4d9s_A UVB-resistance protein 95.4 2.3 7.8E-05 43.9 22.5 72 342-422 287-359 (406)
134 3odt_A Protein DOA1; ubiquitin 95.3 1.8 6.2E-05 41.2 20.4 55 127-189 27-81 (313)
135 3f3f_A Nucleoporin SEH1; struc 95.3 2.2 7.5E-05 41.0 24.3 92 99-195 35-139 (351)
136 3nol_A Glutamine cyclotransfer 95.2 0.54 1.8E-05 45.8 15.9 60 116-184 41-102 (262)
137 1pgu_A Actin interacting prote 95.2 2.5 8.6E-05 44.8 22.8 71 116-195 17-93 (615)
138 1nir_A Nitrite reductase; hemo 95.2 1.6 5.5E-05 46.9 21.2 110 125-259 145-265 (543)
139 3mbr_X Glutamine cyclotransfer 95.0 1.6 5.4E-05 42.0 18.4 61 117-184 20-80 (243)
140 3hrp_A Uncharacterized protein 94.9 4 0.00014 42.0 26.2 70 51-150 133-202 (409)
141 4gga_A P55CDC, cell division c 94.9 3.8 0.00013 41.7 22.5 102 128-253 115-220 (420)
142 2hqs_A Protein TOLB; TOLB, PAL 94.8 2.4 8.3E-05 43.5 20.7 82 98-186 204-285 (415)
143 4aow_A Guanine nucleotide-bind 94.8 3.2 0.00011 40.1 21.0 137 99-256 110-251 (340)
144 1erj_A Transcriptional repress 94.6 1.7 5.7E-05 44.1 18.7 140 230-421 131-278 (393)
145 3dm0_A Maltose-binding peripla 94.6 3.1 0.00011 45.6 22.2 50 98-150 406-460 (694)
146 3dw8_B Serine/threonine-protei 94.5 4.6 0.00016 40.8 24.4 25 229-253 233-260 (447)
147 3fvz_A Peptidyl-glycine alpha- 94.4 4.2 0.00014 40.0 27.3 247 122-420 28-312 (329)
148 2iwa_A Glutamine cyclotransfer 94.2 2.3 7.9E-05 41.4 17.7 34 119-156 22-55 (266)
149 3f3f_A Nucleoporin SEH1; struc 94.2 4 0.00014 39.0 21.9 120 123-253 17-145 (351)
150 2ecf_A Dipeptidyl peptidase IV 94.2 8 0.00027 42.4 24.5 105 51-186 39-170 (741)
151 3jro_A Fusion protein of prote 93.9 0.38 1.3E-05 54.0 13.0 58 350-421 169-229 (753)
152 4h5i_A Guanine nucleotide-exch 93.7 2.6 9E-05 42.3 17.8 140 98-256 158-305 (365)
153 1pjx_A Dfpase, DIISOPROPYLFLUO 93.5 5.4 0.00019 38.1 20.6 58 123-186 23-90 (314)
154 2hes_X YDR267CP; beta-propelle 93.5 1.3 4.6E-05 43.6 14.9 60 346-421 160-221 (330)
155 3gre_A Serine/threonine-protei 93.4 1.4 4.8E-05 45.0 15.3 89 102-195 48-138 (437)
156 1rwi_B Serine/threonine-protei 93.3 4 0.00014 38.2 17.4 134 98-254 88-225 (270)
157 3bg1_A Protein SEC13 homolog; 93.2 0.78 2.7E-05 45.1 12.5 24 124-150 20-43 (316)
158 4a11_B DNA excision repair pro 93.0 3.4 0.00012 40.9 17.3 108 123-253 105-220 (408)
159 1yfq_A Cell cycle arrest prote 93.0 6.4 0.00022 38.0 19.0 67 122-195 16-84 (342)
160 1jof_A Carboxy-CIS,CIS-muconat 93.0 7.8 0.00027 38.5 20.0 48 99-150 18-68 (365)
161 2bkl_A Prolyl endopeptidase; m 92.9 9.7 0.00033 41.8 22.2 116 55-195 127-255 (695)
162 3k26_A Polycomb protein EED; W 92.8 2.2 7.4E-05 41.7 15.3 29 230-258 123-154 (366)
163 1jmx_B Amine dehydrogenase; ox 92.8 7.3 0.00025 37.6 21.0 86 98-186 66-166 (349)
164 3dw8_B Serine/threonine-protei 92.7 8 0.00027 39.0 19.8 25 123-150 34-58 (447)
165 2xzm_R RACK1; ribosome, transl 92.4 8.8 0.0003 37.6 19.7 82 99-189 51-140 (343)
166 3e5z_A Putative gluconolactona 92.2 7.9 0.00027 37.0 18.2 139 98-254 91-249 (296)
167 3lrv_A PRE-mRNA-splicing facto 92.2 4.2 0.00014 40.0 16.5 139 99-255 151-298 (343)
168 3mmy_A MRNA export factor; mRN 92.1 2.7 9.2E-05 40.9 14.9 112 122-255 44-164 (368)
169 3vu4_A KMHSV2; beta-propeller 92.0 7.8 0.00027 38.5 18.4 59 345-421 201-262 (355)
170 3zwl_B Eukaryotic translation 91.8 4.1 0.00014 39.6 15.7 83 98-189 198-281 (369)
171 2p4o_A Hypothetical protein; p 90.9 12 0.00041 36.2 22.7 78 51-161 34-111 (306)
172 3mbr_X Glutamine cyclotransfer 90.7 12 0.00041 35.7 18.1 163 49-258 20-186 (243)
173 1pby_B Quinohemoprotein amine 90.6 12 0.00042 35.7 25.4 138 98-258 12-170 (337)
174 4gqb_B Methylosome protein 50; 90.4 4.6 0.00016 40.3 14.7 136 98-255 150-293 (344)
175 3nok_A Glutaminyl cyclase; bet 90.3 14 0.00047 35.9 18.5 68 177-259 63-133 (268)
176 2xyi_A Probable histone-bindin 90.2 9.5 0.00032 38.9 17.3 26 122-150 186-212 (430)
177 2vdu_B TRNA (guanine-N(7)-)-me 90.0 18 0.00062 36.8 24.8 140 99-258 127-278 (450)
178 2qc5_A Streptogramin B lactona 89.8 13 0.00045 34.8 26.4 131 99-255 85-221 (300)
179 3g4e_A Regucalcin; six bladed 89.3 11 0.00038 36.2 16.2 145 99-258 75-236 (297)
180 2z3z_A Dipeptidyl aminopeptida 88.6 30 0.001 37.4 22.9 89 97-188 141-278 (706)
181 4a2l_A BT_4663, two-component 88.4 35 0.0012 37.9 38.0 256 99-419 379-650 (795)
182 1pjx_A Dfpase, DIISOPROPYLFLUO 88.2 18 0.00061 34.3 21.8 82 98-187 47-136 (314)
183 3o4h_A Acylamino-acid-releasin 87.4 32 0.0011 36.4 20.3 28 228-255 155-188 (582)
184 2vdu_B TRNA (guanine-N(7)-)-me 87.2 28 0.00095 35.4 18.5 91 98-195 221-335 (450)
185 2iwa_A Glutamine cyclotransfer 87.2 22 0.00076 34.3 16.8 139 98-258 45-188 (266)
186 3nok_A Glutaminyl cyclase; bet 87.2 17 0.00059 35.2 15.5 138 99-258 77-217 (268)
187 2dg1_A DRP35, lactonase; beta 87.0 21 0.00072 34.3 16.7 142 98-253 113-265 (333)
188 3e5z_A Putative gluconolactona 86.5 22 0.00077 33.6 25.0 78 99-184 52-131 (296)
189 3v9f_A Two-component system se 86.4 43 0.0015 37.1 20.8 136 99-255 471-615 (781)
190 2aq5_A Coronin-1A; WD40 repeat 85.5 6.4 0.00022 39.5 12.3 94 98-195 199-295 (402)
191 3nol_A Glutamine cyclotransfer 85.5 27 0.00093 33.6 16.8 139 98-258 66-208 (262)
192 3frx_A Guanine nucleotide-bind 85.0 11 0.00039 36.4 13.5 82 98-188 177-258 (319)
193 4a2l_A BT_4663, two-component 83.0 62 0.0021 35.8 26.8 137 99-255 429-575 (795)
194 3sjl_D Methylamine dehydrogena 82.8 45 0.0015 34.0 18.2 53 97-150 109-168 (386)
195 1tl2_A L10, protein (tachylect 82.5 8.4 0.00029 36.5 10.4 103 122-240 92-199 (236)
196 3g4e_A Regucalcin; six bladed 82.4 19 0.00066 34.5 13.8 28 229-256 60-87 (297)
197 3vu4_A KMHSV2; beta-propeller 81.6 10 0.00035 37.6 11.7 49 99-150 220-270 (355)
198 2p9w_A MAL S 1 allergenic prot 81.3 34 0.0011 34.3 15.0 92 316-419 99-204 (334)
199 2ojh_A Uncharacterized protein 81.0 24 0.00081 32.5 13.5 82 98-186 63-147 (297)
200 4ggc_A P55CDC, cell division c 80.7 38 0.0013 31.8 22.9 87 98-195 90-177 (318)
201 2fp8_A Strictosidine synthase; 80.5 43 0.0015 32.3 21.4 68 345-419 234-302 (322)
202 3dr2_A Exported gluconolactona 77.5 51 0.0017 31.4 15.3 139 98-254 108-270 (305)
203 4d9s_A UVB-resistance protein 77.1 53 0.0018 33.3 15.7 73 342-422 235-307 (406)
204 1qks_A Cytochrome CD1 nitrite 75.4 91 0.0031 33.3 19.8 110 127-259 165-283 (567)
205 3kci_A Probable E3 ubiquitin-p 75.0 48 0.0016 33.4 14.6 211 169-422 62-295 (389)
206 3o4h_A Acylamino-acid-releasin 71.6 5.4 0.00019 42.5 6.6 89 98-195 176-272 (582)
207 2oaj_A Protein SNI1; WD40 repe 70.9 1.4E+02 0.0049 33.7 21.5 64 55-150 24-87 (902)
208 3c5m_A Oligogalacturonate lyas 69.1 33 0.0011 33.5 11.5 50 98-150 265-328 (396)
209 3azo_A Aminopeptidase; POP fam 68.2 36 0.0012 36.5 12.5 90 98-195 266-363 (662)
210 3a72_A EXO-arabinanase; arabin 67.2 27 0.00092 35.2 10.3 171 222-416 22-221 (355)
211 1pby_B Quinohemoprotein amine 67.1 84 0.0029 29.5 21.9 58 130-195 2-61 (337)
212 3a72_A EXO-arabinanase; arabin 66.6 1.1E+02 0.0037 30.6 16.3 131 98-240 8-165 (355)
213 2oaj_A Protein SNI1; WD40 repe 66.5 1.8E+02 0.006 32.9 18.5 25 232-256 713-737 (902)
214 3hrp_A Uncharacterized protein 66.3 1.1E+02 0.0039 30.7 18.2 31 226-256 133-166 (409)
215 3azo_A Aminopeptidase; POP fam 65.0 48 0.0016 35.5 12.6 93 97-195 217-319 (662)
216 3gre_A Serine/threonine-protei 64.7 15 0.00052 37.0 8.0 50 98-150 193-244 (437)
217 1k32_A Tricorn protease; prote 64.4 37 0.0013 39.2 12.1 84 98-187 401-491 (1045)
218 3tc9_A Hypothetical hydrolase; 64.1 66 0.0023 32.9 12.9 131 233-419 149-290 (430)
219 1kb0_A Quinohemoprotein alcoho 60.4 1.9E+02 0.0066 31.4 22.3 56 99-159 89-154 (677)
220 1yr2_A Prolyl oligopeptidase; 59.7 2E+02 0.0069 31.3 21.6 107 55-188 169-288 (741)
221 2xdw_A Prolyl endopeptidase; a 58.7 2E+02 0.0069 31.0 24.1 61 54-137 130-190 (710)
222 2w18_A PALB2, fancn, partner a 57.9 1.3E+02 0.0046 30.1 13.3 26 233-258 192-219 (356)
223 1w8o_A Bacterial sialidase; 3D 57.9 25 0.00085 37.9 8.6 130 383-542 305-438 (601)
224 3mvd_K Regulator of chromosome 57.1 76 0.0026 32.2 11.9 19 168-186 302-320 (423)
225 3c5m_A Oligogalacturonate lyas 56.1 34 0.0012 33.4 8.8 82 98-187 217-302 (396)
226 2ecf_A Dipeptidyl peptidase IV 55.7 87 0.003 33.9 12.8 89 98-195 313-409 (741)
227 2oiz_A Aromatic amine dehydrog 55.6 1.6E+02 0.0054 28.9 20.7 93 98-195 32-136 (361)
228 1npe_A Nidogen, entactin; glyc 54.2 1.3E+02 0.0046 27.6 18.8 138 99-259 103-246 (267)
229 2ad6_A Methanol dehydrogenase 53.2 1.9E+02 0.0064 30.8 14.6 26 231-256 60-90 (571)
230 3pe7_A Oligogalacturonate lyas 53.0 44 0.0015 32.6 9.0 85 98-186 265-369 (388)
231 2j04_A TAU60, YPL007P, hypothe 52.9 25 0.00085 38.1 7.3 84 99-195 109-207 (588)
232 2fp8_A Strictosidine synthase; 50.8 1.7E+02 0.0058 27.8 20.2 80 99-184 103-202 (322)
233 2p9w_A MAL S 1 allergenic prot 48.0 1.2E+02 0.0042 30.1 11.0 89 96-186 99-203 (334)
234 3tc9_A Hypothetical hydrolase; 47.3 82 0.0028 32.2 10.2 123 29-185 160-288 (430)
235 3hxj_A Pyrrolo-quinoline quino 47.0 1.8E+02 0.0063 27.1 19.4 122 99-250 42-165 (330)
236 4hw6_A Hypothetical protein, I 45.6 1.9E+02 0.0066 29.4 12.8 23 234-256 153-176 (433)
237 1jof_A Carboxy-CIS,CIS-muconat 45.3 84 0.0029 30.7 9.6 49 98-148 168-221 (365)
238 2ghs_A AGR_C_1268P; regucalcin 44.9 1.3E+02 0.0044 28.9 10.9 76 98-184 72-150 (326)
239 3ott_A Two-component system se 44.5 3.4E+02 0.012 29.5 15.5 126 99-251 495-626 (758)
240 2jkb_A Sialidase B; intramolec 42.7 3.1E+02 0.01 30.1 14.3 39 379-417 617-657 (686)
241 3mvd_K Regulator of chromosome 40.0 93 0.0032 31.5 9.2 73 342-422 304-376 (423)
242 2z3z_A Dipeptidyl aminopeptida 39.9 1.6E+02 0.0054 31.5 11.6 87 95-188 333-421 (706)
243 1xfd_A DIP, dipeptidyl aminope 37.8 2.2E+02 0.0076 30.4 12.4 85 97-188 91-193 (723)
244 2j04_A TAU60, YPL007P, hypothe 37.8 1.4E+02 0.0047 32.3 10.2 84 98-195 152-250 (588)
245 2xyi_A Probable histone-bindin 37.5 1.1E+02 0.0036 30.8 9.1 89 98-195 255-349 (430)
246 4hw6_A Hypothetical protein, I 37.2 1.7E+02 0.0059 29.8 10.8 60 118-184 228-290 (433)
247 1kv9_A Type II quinohemoprotei 37.2 1.1E+02 0.0039 33.2 9.8 97 290-419 66-171 (668)
248 1kv9_A Type II quinohemoprotei 36.8 1.3E+02 0.0043 32.8 10.1 80 99-184 78-168 (668)
249 1yiq_A Quinohemoprotein alcoho 36.5 1.4E+02 0.0047 32.7 10.4 97 290-419 70-176 (689)
250 3pe7_A Oligogalacturonate lyas 35.0 2E+02 0.0067 27.7 10.5 50 98-150 61-110 (388)
251 1k32_A Tricorn protease; prote 34.9 2E+02 0.0067 32.9 11.8 82 98-188 359-441 (1045)
252 2oiz_A Aromatic amine dehydrog 34.4 80 0.0027 31.2 7.4 74 97-180 286-360 (361)
253 1flg_A Protein (quinoprotein e 34.3 3.5E+02 0.012 28.8 13.0 27 230-256 65-94 (582)
254 1qks_A Cytochrome CD1 nitrite 34.1 4.5E+02 0.015 27.8 22.9 30 229-258 348-380 (567)
255 2p4o_A Hypothetical protein; p 33.6 1.4E+02 0.0047 28.4 8.8 59 344-417 76-134 (306)
256 2vov_A MOPE, surface-associate 32.9 45 0.0016 30.2 4.5 33 518-556 278-331 (336)
257 2ad6_A Methanol dehydrogenase 32.1 1.2E+02 0.0041 32.3 8.8 78 97-184 444-523 (571)
258 3das_A Putative oxidoreductase 31.5 2.6E+02 0.0089 27.7 10.6 121 37-188 21-160 (347)
259 3dr2_A Exported gluconolactona 30.4 2.9E+02 0.01 25.8 10.6 48 98-150 216-266 (305)
260 1w8o_A Bacterial sialidase; 3D 29.8 2E+02 0.0068 30.5 10.1 125 106-240 199-339 (601)
261 1cru_A Protein (soluble quinop 29.2 1.2E+02 0.0041 31.4 7.9 28 39-67 18-45 (454)
262 1flg_A Protein (quinoprotein e 29.0 1.4E+02 0.0047 31.9 8.6 78 97-184 466-545 (582)
263 1kb0_A Quinohemoprotein alcoho 28.5 1.1E+02 0.0037 33.5 7.7 97 290-419 77-183 (677)
264 1w6s_A Methanol dehydrogenase 27.9 1.3E+02 0.0046 32.3 8.3 78 97-184 453-532 (599)
265 1w6s_A Methanol dehydrogenase 26.6 2.7E+02 0.0094 29.8 10.5 82 99-185 75-173 (599)
266 1tl2_A L10, protein (tachylect 26.1 1.8E+02 0.006 27.4 7.5 104 124-241 47-153 (236)
267 2hz6_A Endoplasmic reticulum t 24.9 25 0.00087 35.1 1.7 54 319-390 21-74 (369)
268 2qe8_A Uncharacterized protein 24.4 1.5E+02 0.005 28.7 7.3 58 345-420 253-311 (343)
269 3of7_A Regulator of chromosome 24.4 2.6E+02 0.0088 28.7 9.5 116 53-185 268-402 (473)
270 2mad_H Methylamine dehydrogena 22.9 5.5E+02 0.019 25.2 26.0 53 316-384 297-351 (373)
271 2ism_A Putative oxidoreductase 22.8 3.2E+02 0.011 26.6 9.5 116 38-187 21-154 (352)
272 3qhy_B Beta-lactamase inhibito 22.4 2.8E+02 0.0096 26.3 8.7 50 127-187 196-245 (282)
273 3m0c_C LDL receptor, low-densi 22.0 4.4E+02 0.015 29.3 11.3 81 98-185 538-619 (791)
274 2oit_A Nucleoporin 214KDA; NH2 21.6 1.2E+02 0.0042 30.7 6.2 108 48-189 92-214 (434)
275 2j04_B YDR362CP, TAU91; beta p 20.6 89 0.0031 32.9 5.0 64 122-195 360-424 (524)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.7e-72 Score=634.48 Aligned_cols=457 Identities=21% Similarity=0.316 Sum_probs=350.2
Q ss_pred CCCCCCCCCCceEEccCCcccceeEEEEee-CCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCC
Q 041651 29 VLPPYAGSQGEWNLLHESIGISAMHMQLLH-DNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATN 107 (557)
Q Consensus 29 ~~~~~~~~~g~W~~~~~~~~~~~~h~~~~~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~ 107 (557)
..+.||+..++|+.+.++ +....|+++++ +||||++||.... .+ |.. ......+.+||+.++
T Consensus 167 ~~~~~dp~~~~W~~~~~~-P~~~~~~av~~~~g~l~v~GG~~~~--~~----~~~----------~~~~~~~~~yd~~t~ 229 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDL-PIVPAAAAIEPTSGRVLMWSSYRND--AF----GGS----------PGGITLTSSWDPSTG 229 (656)
T ss_dssp CCCCCCTTSCEEEEEEEC-SSCCSEEEEETTTTEEEEEEECCCT--TT----CSC----------CCSEEEEEEECTTTC
T ss_pred ccccCCCCCCeeeeeccC-CCCceeEEEEecCCEEEEEeccccc--cc----ccC----------CCCeEEEEEEeCCCC
Confidence 589999999999998775 45678888887 9999999997521 11 100 012346899999999
Q ss_pred cEEECccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEE
Q 041651 108 AYRPLMVQ---TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIII 184 (557)
Q Consensus 108 ~w~~l~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvv 184 (557)
+|+.++.+ +..+|++++++.||+||++||... .++++|||+ +++|+++++ |+.+||+|++++++||+|||+
T Consensus 230 ~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~---t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 230 IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS---SDSWIPGPD-MQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG---GTEEEECCC-CSSCCSSCEEEECTTSCEEEE
T ss_pred cEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc---CCceeECCC-CCccccccceEEecCCeEEEE
Confidence 99988764 566888888889999999999754 479999999 899999986 999999999999989999999
Q ss_pred cCcCC-----CceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-----------ceEEE
Q 041651 185 GGRRQ-----FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-----------RSILF 247 (557)
Q Consensus 185 GG~~~-----~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-----------~~~~y 247 (557)
||... .++|+| |.+ ++|..++..... ....... +..+..++++|++||. ..++|
T Consensus 304 GG~~~~~~~~~~~e~yd~~t------~~W~~~~~~~~~--p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSS------KTWTSLPNAKVN--PMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTT------TEEEEETTSCSG--GGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred eCcccCCcccccceEeCCCC------CcceeCCCcccc--ccccccc-cceeecCCceEEEECCCCcEEEecCccceeee
Confidence 99532 468999 773 378765311000 0000000 1122357888888853 36899
Q ss_pred eCCCCeEEEEecCCCCCC-CCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCC---ceEEEE
Q 041651 248 DYKQNKVLKEYPEIPGAD-PRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAIS---TCGRLV 323 (557)
Q Consensus 248 Dp~t~~W~~~~p~lp~~~-~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~---s~~~~d 323 (557)
|+++++|.......+... ....+..+++++++. + +++||++||.+.... ..+++ .+++||
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~----~----~~~i~v~GG~~~~~~--------~~~~~~~~~v~~yd 438 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA----V----KGKILTFGGSPDYQD--------SDATTNAHIITLGE 438 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEET----T----TTEEEEECCBSSSSS--------SBCCCCEEEEECCS
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccC----C----CCeEEEEeCCCCCCC--------CCcCCcceEEEcCC
Confidence 999999985432221100 000112367777653 1 899999999642110 02344 344555
Q ss_pred ecCCCCcceee---cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccc
Q 041651 324 VSHANPSWVME---EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRM 400 (557)
Q Consensus 324 ~~~~~~~W~~~---~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~ 400 (557)
+.. ++|+.. +|+.+|.++++++++||+|||+||.+.+. +|. +.+++.++|+|||+++ +|+.+++|+.+|.
T Consensus 439 ~~~--~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~ 511 (656)
T 1k3i_A 439 PGT--SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRV 511 (656)
T ss_dssp TTS--CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCC
T ss_pred CCC--CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccc
Confidence 543 689863 89999999999999999999999986432 222 3456789999999999 9999999999999
Q ss_pred ccccceeccCCcEEEecCCCCcccccccccCCCcceEEEEcCCCCCC--ccCCCCCceecC-CccccCCceEEEEEEeec
Q 041651 401 YHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSA--EYATVRPKILSL-NETIGYKATFQVRFSVEE 477 (557)
Q Consensus 401 yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~--~~~~~RP~i~~~-p~~~~~g~~~~v~~~~~~ 477 (557)
||+++++++||+||++||+.++.+. ++++++|+|+||||++ +..+.||+|+++ |+++.||++|+|+++.
T Consensus 512 ~hs~a~ll~dg~v~v~GG~~~~~~~------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~~~~~~g~~~~~~~~~-- 583 (656)
T 1k3i_A 512 YHSISLLLPDGRVFNGGGGLCGDCT------TNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGRITISTDS-- 583 (656)
T ss_dssp TTEEEEECTTSCEEEEECCCCTTCS------CCCCEEEEEECGGGBCTTSSBCCCCCEEEESCSEEETTCEEEEEESS--
T ss_pred cccHhhcCCCcEEEecCCCCCCCCC------CCeeEEEEEeChhhccCCCCcCCCCcccccCCceecCCCEEEEEEec--
Confidence 9999999999999999998776542 3478999999999986 356789999994 9999999999999863
Q ss_pred ccccceEEEEEEcCCccccccCCCcceEEeEeEEEeecCcceEEEEEECCCCCCcCCCcceEEEEEc-CCCCCccEEEEc
Q 041651 478 YLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVH-AEIPSSGMWVKM 556 (557)
Q Consensus 478 ~~~~~~~~v~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~~~~~~~~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~v 556 (557)
.+.+|+|+|++|+||++||+||+|+|+++. .|+ .+++|++|+|++||||||||||||+ +||||+|+||+|
T Consensus 584 ----~~~~~~l~~~~~~th~~~~~qr~~~l~~~~---~~~--~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~ 654 (656)
T 1k3i_A 584 ----SISKASLIRYGTATHTVNTDQRRIPLTLTN---NGG--NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRV 654 (656)
T ss_dssp ----CCSEEEEEECCEEETTBCSSCCEEECCEEE---EET--TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEE
T ss_pred ----cceEEEEEecCccccCcCCCCcEEecceEe---cCC--CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEE
Confidence 357899999999999999999999999975 232 3678999999999999999999996 999999999998
Q ss_pred C
Q 041651 557 E 557 (557)
Q Consensus 557 ~ 557 (557)
+
T Consensus 655 ~ 655 (656)
T 1k3i_A 655 T 655 (656)
T ss_dssp E
T ss_pred e
Confidence 4
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=288.98 Aligned_cols=275 Identities=17% Similarity=0.280 Sum_probs=212.1
Q ss_pred EEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEE
Q 041651 54 MQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQ 133 (557)
Q Consensus 54 ~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v 133 (557)
..+..+++||++||.+. + ....+.+||+.+++|+.++.++..++...++..+++||+
T Consensus 10 ~~~~~~~~i~v~GG~~~----------~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv 66 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP----------K-------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFA 66 (302)
T ss_dssp -----CEEEEEECCBSS----------S-------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred cccCCCCEEEEECCCCC----------C-------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEE
Confidence 34445789999999641 0 123488999999999999877766666666677999999
Q ss_pred EcCCCCC--CCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCC----ceeEe-cCCCCCCCCCc
Q 041651 134 SGGYNDG--DHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQF----NYEFY-PKSDEDLSFPQ 206 (557)
Q Consensus 134 ~GG~~~g--~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~----~~E~y-P~~~~~~~~~~ 206 (557)
+||.... .+++++||+. +++|+++++ |+.+|.+|+++++ +|+|||+||.+.. ++|.| |.+ ++
T Consensus 67 ~GG~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~------~~ 135 (302)
T 2xn4_A 67 VGGFNGSLRVRTVDSYDPV---KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKS------NE 135 (302)
T ss_dssp ESCBCSSSBCCCEEEEETT---TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTT------TE
T ss_pred EeCcCCCccccceEEECCC---CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCC------Ce
Confidence 9997532 4789999999 899999986 9999999999988 8999999997653 57888 763 48
Q ss_pred eeeecccccccccccCCccceEEEeeCCcEEEEEcC---------ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEe
Q 041651 207 TFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT---------RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVL 277 (557)
Q Consensus 207 w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~---------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vl 277 (557)
|..++.+.. ..+.+..+..+++||++||. +.++||+.+++|. .++++|. +|..+ +++++
T Consensus 136 W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~ 203 (302)
T 2xn4_A 136 WFHVAPMNT-------RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST--RRSGA--GVGVL 203 (302)
T ss_dssp EEEECCCSS-------CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE
T ss_pred EeecCCCCC-------cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc--ccccc--cEEEE
Confidence 986654322 22346667789999999983 3789999999999 4888875 57654 33333
Q ss_pred ecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEE
Q 041651 278 LPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIII 356 (557)
Q Consensus 278 lp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vv 356 (557)
+++||++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++|||+
T Consensus 204 ------------~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~-~~~i~v~ 257 (302)
T 2xn4_A 204 ------------NNLLYAVGGHDGPL-----------VRKSVEVYDPTT--NAWRQVADMNMCRRNAGVCAV-NGLLYVV 257 (302)
T ss_dssp ------------TTEEEEECCBSSSS-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEE
T ss_pred ------------CCEEEEECCCCCCc-----------ccceEEEEeCCC--CCEeeCCCCCCccccCeEEEE-CCEEEEE
Confidence 89999999976321 256789999875 699998 99999999887766 9999999
Q ss_pred cCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecC-CCCCcccccccceeccCCcE
Q 041651 357 NGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVME-PSTRPRMYHSSAILLTDGRV 413 (557)
Q Consensus 357 GG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~-~~~~~R~yhs~a~llpdG~V 413 (557)
||.+. . ....++++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 258 GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 258 GGDDG-S-------CNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp CCBCS-S-------SBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred CCcCC-C-------cccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 99752 1 12457999999999 999997 89999999988776 5554
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.2e-34 Score=291.43 Aligned_cols=278 Identities=15% Similarity=0.168 Sum_probs=213.8
Q ss_pred cccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeec
Q 041651 47 IGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVL 126 (557)
Q Consensus 47 ~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l 126 (557)
.+.+.-|.++..+++||++||.. + + ....+.+||+.+++|+.++.++..++...++.
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~~-~---------~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 68 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGYF-R---------Q-------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV 68 (308)
T ss_dssp ---------CCCCCCEEEECCBS-S---------S-------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred CeeeCCccccCCCCEEEEEeCcC-C---------C-------------CcceEEEEcCCCCeEeECCCCCcccccceEEE
Confidence 45667788888899999999962 1 1 12348899999999999987766666666667
Q ss_pred CCCcEEEEcCCC----C--CCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC----CceeEe-
Q 041651 127 PNGTLVQSGGYN----D--GDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ----FNYEFY- 195 (557)
Q Consensus 127 ~dG~i~v~GG~~----~--g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y- 195 (557)
.+++||++||.. . ..+++++||+. +++|+++++ |+.+|.+++++++ +|+|||+||.+. .++|.|
T Consensus 69 ~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPM---TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp ETTEEEEECCEEEETTEEEECCCEEEEETT---TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEE
T ss_pred ECCEEEEECCCcCCCCCCeecceEEEECCC---CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEEC
Confidence 799999999972 1 24689999999 899999986 9999999999988 999999999764 357888
Q ss_pred cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-------ceEEEeCCCCeEEEEecCCCCCCCCc
Q 041651 196 PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-------RSILFDYKQNKVLKEYPEIPGADPRN 268 (557)
Q Consensus 196 P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-------~~~~yDp~t~~W~~~~p~lp~~~~r~ 268 (557)
|.+ ++|..++.+.. ..+.+..+..+++||++||. +.++||+.+++|. .++++|. +|.
T Consensus 144 ~~~------~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~ 207 (308)
T 1zgk_A 144 PER------DEWHLVAPMLT-------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT--IRS 207 (308)
T ss_dssp TTT------TEEEECCCCSS-------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS--CCB
T ss_pred CCC------CeEeECCCCCc-------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC--ccc
Confidence 763 48886543322 23445666779999999983 4799999999998 5887775 576
Q ss_pred cCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEE
Q 041651 269 YPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMIL 347 (557)
Q Consensus 269 ~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~ 347 (557)
.+ +++++ +++||++||.+... ..+++++||+.. ++|+.. +|+.+|..+++++
T Consensus 208 ~~--~~~~~------------~~~iyv~GG~~~~~-----------~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 208 GA--GVCVL------------HNCIYAAGGYDGQD-----------QLNSVERYDVET--ETWTFVAPMKHRRSALGITV 260 (308)
T ss_dssp SC--EEEEE------------TTEEEEECCBCSSS-----------BCCCEEEEETTT--TEEEECCCCSSCCBSCEEEE
T ss_pred cc--eEEEE------------CCEEEEEeCCCCCC-----------ccceEEEEeCCC--CcEEECCCCCCCccceEEEE
Confidence 54 33333 89999999976321 257889999875 699998 9999999998877
Q ss_pred cCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccccccccee
Q 041651 348 LPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAIL 407 (557)
Q Consensus 348 lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~l 407 (557)
+ +++|||+||... . ....++++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 261 ~-~~~i~v~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 261 H-QGRIYVLGGYDG-H-------TFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp E-TTEEEEECCBCS-S-------CBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred E-CCEEEEEcCcCC-C-------cccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 6 999999999752 1 22457999999999 99999999999999987654
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.6e-33 Score=281.70 Aligned_cols=267 Identities=12% Similarity=0.162 Sum_probs=212.7
Q ss_pred CCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCC
Q 041651 59 DNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYN 138 (557)
Q Consensus 59 ~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~ 138 (557)
.+.||++||... ...+.+||+.+++|+.++.++..++...++..+++||++||..
T Consensus 11 ~~~l~~~GG~~~-------------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 65 (306)
T 3ii7_A 11 HDYRIALFGGSQ-------------------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ 65 (306)
T ss_dssp CCEEEEEECCSS-------------------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS
T ss_pred cceEEEEeCCCC-------------------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC
Confidence 478999998631 1237899999999999988777777777777899999999975
Q ss_pred C-CCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC-----CceeEe-cCCCCCCCCCceeeec
Q 041651 139 D-GDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ-----FNYEFY-PKSDEDLSFPQTFMLH 211 (557)
Q Consensus 139 ~-g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~-----~~~E~y-P~~~~~~~~~~w~~~~ 211 (557)
. ..+++++||+. +++|+.+++ |+.+|..|+++++ +++|||+||.+. .++++| |.+ ++|..++
T Consensus 66 ~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~------~~W~~~~ 134 (306)
T 3ii7_A 66 LFPIKRMDCYNVV---KDSWYSKLG-PPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRT------ESWHTKP 134 (306)
T ss_dssp SSBCCEEEEEETT---TTEEEEEEC-CSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTT------TEEEEEC
T ss_pred CCCcceEEEEeCC---CCeEEECCC-CCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCC------CceEeCC
Confidence 2 25789999999 899999986 9999999999988 899999999862 357888 763 4798665
Q ss_pred ccccccccccCCccceEEEeeCCcEEEEEcC-----------ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecC
Q 041651 212 FLLETRDYAENNLYPFVHLLPDGNLFIFANT-----------RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPL 280 (557)
Q Consensus 212 ~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-----------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~ 280 (557)
.+.. ..+.+..+..+|+||++||. +.++||+.+++|. .++++|. +|..+ +++++
T Consensus 135 ~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~--- 199 (306)
T 3ii7_A 135 SMLT-------QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE--ARKNH--GLVFV--- 199 (306)
T ss_dssp CCSS-------CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE---
T ss_pred CCcC-------CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc--hhhcc--eEEEE---
Confidence 4322 22446667789999999972 3789999999998 5887775 57654 33333
Q ss_pred cCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCc
Q 041651 281 DERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGA 359 (557)
Q Consensus 281 ~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~ 359 (557)
+++||++||.+... ..+++++||+.. ++|+.. +||.+|..+.++++ +++|||+||.
T Consensus 200 ---------~~~i~v~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 256 (306)
T 3ii7_A 200 ---------KDKIFAVGGQNGLG-----------GLDNVEYYDIKL--NEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGF 256 (306)
T ss_dssp ---------TTEEEEECCEETTE-----------EBCCEEEEETTT--TEEEECCCCSCCBSCCEEEEE-TTEEEEEECB
T ss_pred ---------CCEEEEEeCCCCCC-----------CCceEEEeeCCC--CcEEECCCCCCCccceeEEEE-CCEEEEEeCc
Confidence 89999999975321 256788999875 689998 99999999988777 9999999997
Q ss_pred CCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccC
Q 041651 360 QLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTD 410 (557)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpd 410 (557)
+. . .....+++|||+++ +|+.+++|+.+|.+|+++++..+
T Consensus 257 ~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 257 QG-V-------GRLGHILEYNTETD---KWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp CS-S-------SBCCEEEEEETTTT---EEEEEEEEECCSCTTCEEEEEEC
T ss_pred CC-C-------eeeeeEEEEcCCCC---eEEeCCCcccccceeEEEEECCc
Confidence 62 1 12357999999999 99999999999999988877543
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=277.31 Aligned_cols=269 Identities=18% Similarity=0.212 Sum_probs=211.1
Q ss_pred eCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCC
Q 041651 58 HDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGY 137 (557)
Q Consensus 58 ~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~ 137 (557)
.+++||++||...+ +. ....+.+||+.+++|+.++.++..++...++..+++||++||.
T Consensus 13 ~~~~i~~~GG~~~~--------~~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 71 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQ--------QS-------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGY 71 (301)
T ss_dssp CCEEEEEECCEETT--------TE-------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCEEEEEeCccCC--------Cc-------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCC
Confidence 47899999994211 11 1235889999999999998776666666677779999999997
Q ss_pred CCC--CCeEEEEcCCCCCCCc---eecCCcccccccCcceEEEecCCcEEEEcCcCC----CceeEe-cCCCCCCCCCce
Q 041651 138 NDG--DHVVRTFTPCDDDQCD---WIELPQHLSERRWYATNQILPDGRIIIIGGRRQ----FNYEFY-PKSDEDLSFPQT 207 (557)
Q Consensus 138 ~~g--~~~v~~ydp~~~~t~~---W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~~~~~~~~w 207 (557)
... .+++++||+. +++ |+.+++ |+.+|..++++++ +++||++||.+. .+++.| +.+ ++|
T Consensus 72 ~~~~~~~~~~~~d~~---~~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~------~~W 140 (301)
T 2vpj_A 72 DGRSRLSSVECLDYT---ADEDGVWYSVAP-MNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNI------DQW 140 (301)
T ss_dssp CSSCBCCCEEEEETT---CCTTCCCEEECC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTT------TEE
T ss_pred CCCccCceEEEEECC---CCCCCeeEECCC-CCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCC------CeE
Confidence 532 4689999999 888 999986 9999999999888 899999999764 357888 763 488
Q ss_pred eeecccccccccccCCccceEEEeeCCcEEEEEcC-------ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecC
Q 041651 208 FMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-------RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPL 280 (557)
Q Consensus 208 ~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~ 280 (557)
..++.+.. ..+.+..+..+|+||++||. +.++||+.+++|. .++++|. +|..+ +++++
T Consensus 141 ~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~~~~~--- 205 (301)
T 2vpj_A 141 SMLGDMQT-------AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT--KRSGA--GVALL--- 205 (301)
T ss_dssp EEEEECSS-------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE---
T ss_pred EECCCCCC-------CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc--ccccc--eEEEE---
Confidence 86543322 22345666779999999983 4799999999998 4887775 56654 33333
Q ss_pred cCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCc
Q 041651 281 DERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGA 359 (557)
Q Consensus 281 ~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~ 359 (557)
+++||++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++||++||.
T Consensus 206 ---------~~~i~v~GG~~~~~-----------~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 262 (301)
T 2vpj_A 206 ---------NDHIYVVGGFDGTA-----------HLSSVEAYNIRT--DSWTTVTSMTTPRCYVGATVL-RGRLYAIAGY 262 (301)
T ss_dssp ---------TTEEEEECCBCSSS-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred ---------CCEEEEEeCCCCCc-----------ccceEEEEeCCC--CcEEECCCCCCcccceeEEEE-CCEEEEEcCc
Confidence 89999999976321 257788999875 699998 99999999988776 9999999997
Q ss_pred CCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccccccccee
Q 041651 360 QLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAIL 407 (557)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~l 407 (557)
+. . .....+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 263 ~~-~-------~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 263 DG-N-------SLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp CS-S-------SBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred CC-C-------cccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 52 1 12457999999999 99999999999999977665
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-31 Score=273.69 Aligned_cols=263 Identities=16% Similarity=0.263 Sum_probs=198.9
Q ss_pred EEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCC---CC-----CCeEEEEcCCCCCCCceecCCcccccccC
Q 041651 99 SILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYN---DG-----DHVVRTFTPCDDDQCDWIELPQHLSERRW 169 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~---~g-----~~~v~~ydp~~~~t~~W~~~~~~m~~~R~ 169 (557)
+.+|||.+++|...+.. +..++...++..+++||++||.. ++ .+.+++||+. +++|+++++ |+.+|.
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~ 101 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV---SSEWVGLPP-LPSARC 101 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT---TTEEEECSC-BSSCBC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC---CCcEEECCC-CCcccc
Confidence 67999999999985432 23455566677899999999952 11 1248999999 899999986 999999
Q ss_pred cceEEEecCCcEEEEcCcCC------CceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC
Q 041651 170 YATNQILPDGRIIIIGGRRQ------FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT 242 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~~~------~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~ 242 (557)
.|+++++ +++|||+||.+. .++++| +.+ ++|..++.+.. ..+.+..+..+|+||++||.
T Consensus 102 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~------~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 102 LFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVA------AKWSEVKNLPI-------KVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp SCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTT------TEEEEECCCSS-------CEESCEEEEETTEEEEECCE
T ss_pred ccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCC------CCEeECCCCCC-------cccccEEEEECCEEEEEcCC
Confidence 9999888 899999999752 246888 763 48986543322 22446667789999999983
Q ss_pred --------ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccc
Q 041651 243 --------RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIR 314 (557)
Q Consensus 243 --------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~p 314 (557)
+.++||+.+++|. .++++|. +|..+ +++++ +++||++||.....
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~------------~~~iyv~GG~~~~~----------- 219 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWK-DLAPMKT--PRSMF--GVAIH------------KGKIVIAGGVTEDG----------- 219 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE------------TTEEEEEEEEETTE-----------
T ss_pred CCCCCccceEEEEcCCCCEEE-ECCCCCC--Ccccc--eEEEE------------CCEEEEEcCcCCCC-----------
Confidence 4799999999998 5888875 57654 34443 89999999975321
Q ss_pred cCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcc-cCCCCccccEEEcCCCCCCCceEec
Q 041651 315 AISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWE-LARGPMTRPIIYRPSEQTSRRFSVM 392 (557)
Q Consensus 315 a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~-~~~~~~~~~e~YDP~t~~g~~W~~~ 392 (557)
..+++++||+.. ++|+.. +||.+|..|+++++ +++||++||......... ........+++|||+++ +|+.+
T Consensus 220 ~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~ 293 (318)
T 2woz_A 220 LSASVEAFDLKT--NKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM 293 (318)
T ss_dssp EEEEEEEEETTT--CCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEE
T ss_pred ccceEEEEECCC--CeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhh
Confidence 246788899875 699998 99999999987766 999999999752110000 00122457999999999 99998
Q ss_pred CCCCCcccccccceeccCCcEEEec
Q 041651 393 EPSTRPRMYHSSAILLTDGRVLIGG 417 (557)
Q Consensus 393 ~~~~~~R~yhs~a~llpdG~V~v~G 417 (557)
++.+|..|+++++ +++||+..
T Consensus 294 --~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 294 --LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp --ESCCGGGTTCEEE--EEEEEGGG
T ss_pred --cccccccccceee--CCEEEEEE
Confidence 7889999988777 99999874
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.5e-31 Score=267.79 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=198.1
Q ss_pred ccccCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCc----CC----
Q 041651 119 WCSSGSVLPNGTLVQSGGYN-DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGR----RQ---- 189 (557)
Q Consensus 119 ~c~~~~~l~dG~i~v~GG~~-~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~----~~---- 189 (557)
++...++..+++||++||.. ...+++++||+. +++|..+++ |+.+|.+++++++ +++||++||. +.
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 89 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS---NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDS 89 (308)
T ss_dssp ------CCCCCCEEEECCBSSSBCCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEEC
T ss_pred eCCccccCCCCEEEEEeCcCCCCcceEEEEcCC---CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCeec
Confidence 44455666799999999973 235789999999 899999986 9999999998888 8999999998 32
Q ss_pred CceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc-------CceEEEeCCCCeEEEEecCC
Q 041651 190 FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN-------TRSILFDYKQNKVLKEYPEI 261 (557)
Q Consensus 190 ~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg-------~~~~~yDp~t~~W~~~~p~l 261 (557)
..+++| |.+ .+|..++.+.. ..+-+..++.+|+||++|| ++.++||+.+++|. .++++
T Consensus 90 ~~~~~~d~~~------~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~ 155 (308)
T 1zgk_A 90 SALDCYNPMT------NQWSPCAPMSV-------PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPM 155 (308)
T ss_dssp CCEEEEETTT------TEEEECCCCSS-------CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCC
T ss_pred ceEEEECCCC------CeEeECCCCCc-------CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCC
Confidence 356788 763 48886654322 2234566677999999998 35899999999998 58888
Q ss_pred CCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCc
Q 041651 262 PGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPR 340 (557)
Q Consensus 262 p~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R 340 (557)
|. +|..+ +++++ +++||++||.+... .++++++||+.. ++|+.. +|+.+|
T Consensus 156 p~--~r~~~--~~~~~------------~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r 206 (308)
T 1zgk_A 156 LT--RRIGV--GVAVL------------NRLLYAVGGFDGTN-----------RLNSAECYYPER--NEWRMITAMNTIR 206 (308)
T ss_dssp SS--CCBSC--EEEEE------------TTEEEEECCBCSSC-----------BCCCEEEEETTT--TEEEECCCCSSCC
T ss_pred Cc--cccce--EEEEE------------CCEEEEEeCCCCCC-----------cCceEEEEeCCC--CeEeeCCCCCCcc
Confidence 75 57654 33333 89999999976321 257889999875 699998 999999
Q ss_pred eeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCC
Q 041651 341 VMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 341 ~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~ 420 (557)
..++++++ +++|||+||... . .....+++|||+++ +|+.+++|+.+|..|+++++ +++||++||..
T Consensus 207 ~~~~~~~~-~~~iyv~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 272 (308)
T 1zgk_A 207 SGAGVCVL-HNCIYAAGGYDG-Q-------DQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYD 272 (308)
T ss_dssp BSCEEEEE-TTEEEEECCBCS-S-------SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred ccceEEEE-CCEEEEEeCCCC-C-------CccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcC
Confidence 99988776 999999999762 1 12457999999999 99999999999999987776 99999999964
Q ss_pred CcccccccccCCCcceEEEEcCCCC
Q 041651 421 HIYYNFTNVVYPTDLSLEAYSPPYL 445 (557)
Q Consensus 421 ~~~~~~~~~~~~~~~~vE~y~Ppyl 445 (557)
... + ..++|+|+|..-
T Consensus 273 ~~~-------~--~~~v~~yd~~~~ 288 (308)
T 1zgk_A 273 GHT-------F--LDSVECYDPDTD 288 (308)
T ss_dssp SSC-------B--CCEEEEEETTTT
T ss_pred CCc-------c--cceEEEEcCCCC
Confidence 321 1 347999999764
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.98 E-value=9.7e-32 Score=274.61 Aligned_cols=284 Identities=14% Similarity=0.138 Sum_probs=213.4
Q ss_pred CCCCCCCCCCCceEEccCCc--ccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECC
Q 041651 28 QVLPPYAGSQGEWNLLHESI--GISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVA 105 (557)
Q Consensus 28 ~~~~~~~~~~g~W~~~~~~~--~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~ 105 (557)
..+..||+.+++|.. ++++ ..+..|++++.+++||++||...... +... .....+.+||+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~------~~~~----------~~~~~~~~~d~~ 75 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNED------NKED----------PMSAYFLQFDHL 75 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSS------CSSS----------CEEEEEEEEETT
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCC------CCcc----------ccccceEEecCC
Confidence 567889999999987 4432 25677888888999999999631100 1000 012458899999
Q ss_pred CCcEEECccCCCcccccCeecCCCcEEEEcCCC-----CCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCc
Q 041651 106 TNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYN-----DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGR 180 (557)
Q Consensus 106 t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~-----~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 180 (557)
+++|+.++.++..++...++..+++||++||.. ...+++++||+. +++|+++++ |+.+|..|+++++ +++
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~ 150 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL---SFKWGESDP-LPYVVYGHTVLSH-MDL 150 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTE
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC---CCcEeECCC-CCCcccceeEEEE-CCE
Confidence 999999988777777666777799999999953 124789999999 899999986 9999999998887 899
Q ss_pred EEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEeCCCCeEEEEecC
Q 041651 181 IIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPE 260 (557)
Q Consensus 181 vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp~t~~W~~~~p~ 260 (557)
|||+||..... . .. ++.++||+.+++|. .+++
T Consensus 151 iyv~GG~~~~~--------------~--------~~-------------------------~~~~~yd~~~~~W~-~~~~ 182 (315)
T 4asc_A 151 VYVIGGKGSDR--------------K--------CL-------------------------NKMCVYDPKKFEWK-ELAP 182 (315)
T ss_dssp EEEECCBCTTS--------------C--------BC-------------------------CCEEEEETTTTEEE-ECCC
T ss_pred EEEEeCCCCCC--------------c--------cc-------------------------ceEEEEeCCCCeEE-ECCC
Confidence 99999974211 0 00 02469999999998 5888
Q ss_pred CCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCC
Q 041651 261 IPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLP 339 (557)
Q Consensus 261 lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~ 339 (557)
||. +|..+ +++++ +++||++||.+... ..+++++||+.. ++|+.. +||.+
T Consensus 183 ~p~--~r~~~--~~~~~------------~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~ 233 (315)
T 4asc_A 183 MQT--ARSLF--GATVH------------DGRIIVAAGVTDTG-----------LTSSAEVYSITD--NKWAPFEAFPQE 233 (315)
T ss_dssp CSS--CCBSC--EEEEE------------TTEEEEEEEECSSS-----------EEEEEEEEETTT--TEEEEECCCSSC
T ss_pred CCC--chhce--EEEEE------------CCEEEEEeccCCCC-----------ccceEEEEECCC--CeEEECCCCCCc
Confidence 875 57764 34443 89999999976321 246788899875 699998 99999
Q ss_pred ceeeeEEEcCCCeEEEEcCcCCCCCCcc--cCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEec
Q 041651 340 RVMGDMILLPNGDVIIINGAQLGTAGWE--LARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGG 417 (557)
Q Consensus 340 R~~~~~v~lpdG~I~vvGG~~~g~~g~~--~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~G 417 (557)
|..++++++ +++|||+||... ..... ........+++|||+++ +|+.+ ++.+|..|+++++ ++++|+..
T Consensus 234 r~~~~~~~~-~~~l~v~GG~~~-~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~~~~~--~~~l~v~~ 304 (315)
T 4asc_A 234 RSSLSLVSL-VGTLYAIGGFAT-LETESGELVPTELNDIWRYNEEEK---KWEGV--LREIAYAAGATFL--PVRLNVLR 304 (315)
T ss_dssp CBSCEEEEE-TTEEEEEEEEEE-EECTTSCEEEEEEEEEEEEETTTT---EEEEE--ESCSSCCSSCEEE--EEEECGGG
T ss_pred ccceeEEEE-CCEEEEECCccc-cCcCCccccccccCcEEEecCCCC---hhhhh--ccCCcCccceEEe--CCEEEEEE
Confidence 999988776 999999999752 10000 00012347899999999 99998 6778999987776 99999987
Q ss_pred CC
Q 041651 418 SN 419 (557)
Q Consensus 418 G~ 419 (557)
..
T Consensus 305 ~~ 306 (315)
T 4asc_A 305 LT 306 (315)
T ss_dssp SE
T ss_pred eh
Confidence 63
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.98 E-value=1.1e-30 Score=264.83 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=196.4
Q ss_pred CCCcEEEEcCCCC-CCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC----CceeEe-cCCCC
Q 041651 127 PNGTLVQSGGYND-GDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ----FNYEFY-PKSDE 200 (557)
Q Consensus 127 ~dG~i~v~GG~~~-g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~~ 200 (557)
.+++||++||... ..+++++||+. +++|..+++ |+.+|.+++++++ +++||++||.+. .+++.| |.+
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~-- 86 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFK---EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVK-- 86 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETT---TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTT--
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCc---CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCC--
Confidence 4789999999753 35789999999 899999986 9999999999888 999999999764 357888 763
Q ss_pred CCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-------ceEEEeCCCCeEEEEecCCCCCCCCccCCCC
Q 041651 201 DLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-------RSILFDYKQNKVLKEYPEIPGADPRNYPSTG 273 (557)
Q Consensus 201 ~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g 273 (557)
.+|..++.+.. ..+.+..++.+|+||++||. +.++||+.+++|. .++++|. +|..+ +
T Consensus 87 ----~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~ 150 (302)
T 2xn4_A 87 ----DQWTSVANMRD-------RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT--RRSSV--G 150 (302)
T ss_dssp ----TEEEEECCCSS-------CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS--CCBSC--E
T ss_pred ----CceeeCCCCCc-------cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC--cccCc--e
Confidence 48986654432 22346677789999999983 5789999999998 5888875 57654 3
Q ss_pred ceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCe
Q 041651 274 SSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGD 352 (557)
Q Consensus 274 ~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~ 352 (557)
++++ +++||++||.+.... ...+++++||+.. ++|+.. +|+.+|..++++++ +++
T Consensus 151 ~~~~------------~~~iyv~GG~~~~~~---------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~ 206 (302)
T 2xn4_A 151 VGVV------------GGLLYAVGGYDVASR---------QCLSTVECYNATT--NEWTYIAEMSTRRSGAGVGVL-NNL 206 (302)
T ss_dssp EEEE------------TTEEEEECCEETTTT---------EECCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred EEEE------------CCEEEEEeCCCCCCC---------ccccEEEEEeCCC--CcEEECCCCccccccccEEEE-CCE
Confidence 3433 899999999753210 1257889999875 699998 99999999987766 999
Q ss_pred EEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCCcccccccccCC
Q 041651 353 VIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYP 432 (557)
Q Consensus 353 I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~ 432 (557)
||++||... . ....++++|||+++ +|+.+++|+.+|..|+++++ +++||++||..... .
T Consensus 207 iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~-------~- 265 (302)
T 2xn4_A 207 LYAVGGHDG-P-------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC-------N- 265 (302)
T ss_dssp EEEECCBSS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS-------B-
T ss_pred EEEECCCCC-C-------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc-------c-
Confidence 999999762 1 12347999999999 99999999999999987665 99999999964321 1
Q ss_pred CcceEEEEcCCCC
Q 041651 433 TDLSLEAYSPPYL 445 (557)
Q Consensus 433 ~~~~vE~y~Ppyl 445 (557)
..++|+|+|..-
T Consensus 266 -~~~v~~yd~~~~ 277 (302)
T 2xn4_A 266 -LASVEYYNPTTD 277 (302)
T ss_dssp -CCCEEEEETTTT
T ss_pred -cccEEEEcCCCC
Confidence 347999999864
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=263.87 Aligned_cols=250 Identities=14% Similarity=0.179 Sum_probs=197.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC---CceeEe-cCCCCCCC
Q 041651 128 NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ---FNYEFY-PKSDEDLS 203 (557)
Q Consensus 128 dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~---~~~E~y-P~~~~~~~ 203 (557)
.+.||++||... .+++++|||. +++|+.+++ |+.+|.+++++++ +++|||+||.+. .+++.| |.+
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~----- 79 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK---DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVK----- 79 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT---TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTT-----
T ss_pred cceEEEEeCCCC-CceEEEecCC---CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCC-----
Confidence 478999999854 7899999999 899999986 9999999999888 899999999762 356788 763
Q ss_pred CCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--------ceEEEeCCCCeEEEEecCCCCCCCCccCCCCce
Q 041651 204 FPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--------RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSS 275 (557)
Q Consensus 204 ~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--------~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~ 275 (557)
++|..++.+.. ..+.+..++.+++||++||. +.++||+.+++|. .++++|. +|..+ +++
T Consensus 80 -~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~~~ 146 (306)
T 3ii7_A 80 -DSWYSKLGPPT-------PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT--QRCSH--GMV 146 (306)
T ss_dssp -TEEEEEECCSS-------CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEE
T ss_pred -CeEEECCCCCc-------cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC--Cccee--EEE
Confidence 48986654322 22346666779999999984 3799999999998 5888875 57654 333
Q ss_pred EeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEE
Q 041651 276 VLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVI 354 (557)
Q Consensus 276 vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~ 354 (557)
++ +++||++||....... ....+++++||+.. ++|+.. +|+.+|..|+++++ +++||
T Consensus 147 ~~------------~~~iyv~GG~~~~~~~-------~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~ 204 (306)
T 3ii7_A 147 EA------------NGLIYVCGGSLGNNVS-------GRVLNSCEVYDPAT--ETWTELCPMIEARKNHGLVFV-KDKIF 204 (306)
T ss_dssp EE------------TTEEEEECCEESCTTT-------CEECCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEE
T ss_pred EE------------CCEEEEECCCCCCCCc-------ccccceEEEeCCCC--CeEEECCCccchhhcceEEEE-CCEEE
Confidence 33 8999999997532110 01267889999986 699998 99999999988776 99999
Q ss_pred EEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCCcccccccccCCCc
Q 041651 355 IINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTD 434 (557)
Q Consensus 355 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~~~ 434 (557)
++||... . .....+++|||+++ +|+.+++++.+|..|+++++ +++||++||...... .
T Consensus 205 v~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~---------~ 262 (306)
T 3ii7_A 205 AVGGQNG-L-------GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR---------L 262 (306)
T ss_dssp EECCEET-T-------EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB---------C
T ss_pred EEeCCCC-C-------CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee---------e
Confidence 9999762 1 12457999999999 99999999999999987776 999999999653321 3
Q ss_pred ceEEEEcCCCC
Q 041651 435 LSLEAYSPPYL 445 (557)
Q Consensus 435 ~~vE~y~Ppyl 445 (557)
.++++|+|..-
T Consensus 263 ~~~~~yd~~~~ 273 (306)
T 3ii7_A 263 GHILEYNTETD 273 (306)
T ss_dssp CEEEEEETTTT
T ss_pred eeEEEEcCCCC
Confidence 47999999874
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=256.99 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=194.7
Q ss_pred CCCcEEEEcC-CCCC--CCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC----CceeEe-cCC
Q 041651 127 PNGTLVQSGG-YNDG--DHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ----FNYEFY-PKS 198 (557)
Q Consensus 127 ~dG~i~v~GG-~~~g--~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~ 198 (557)
.+++||++|| ...+ .+++++||+. +++|..+++ |+.+|.+++++.+ +++||++||.+. .++++| +.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK---TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTA 87 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC---CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCC
Confidence 4789999999 4322 5789999999 899999986 9999999998887 899999999764 356788 763
Q ss_pred CCCCCCCc---eeeecccccccccccCCccceEEEeeCCcEEEEEcC-------ceEEEeCCCCeEEEEecCCCCCCCCc
Q 041651 199 DEDLSFPQ---TFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-------RSILFDYKQNKVLKEYPEIPGADPRN 268 (557)
Q Consensus 199 ~~~~~~~~---w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-------~~~~yDp~t~~W~~~~p~lp~~~~r~ 268 (557)
.+ |..++.+.. ..+.+..+..+++||++||. +.++||+.+++|. .++++|. +|.
T Consensus 88 ------~~~~~W~~~~~~p~-------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~ 151 (301)
T 2vpj_A 88 ------DEDGVWYSVAPMNV-------RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT--ARE 151 (301)
T ss_dssp ------CTTCCCEEECCCSS-------CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS--CCB
T ss_pred ------CCCCeeEECCCCCC-------CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC--Ccc
Confidence 25 876654322 22345666779999999983 5799999999999 4887875 576
Q ss_pred cCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEE
Q 041651 269 YPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMIL 347 (557)
Q Consensus 269 ~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~ 347 (557)
.+ +++++ +++||++||.+... ..+++++||+.. ++|+.. +||.+|..+++++
T Consensus 152 ~~--~~~~~------------~~~iyv~GG~~~~~-----------~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 152 GA--GLVVA------------SGVIYCLGGYDGLN-----------ILNSVEKYDPHT--GHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp SC--EEEEE------------TTEEEEECCBCSSC-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEE
T ss_pred cc--eEEEE------------CCEEEEECCCCCCc-----------ccceEEEEeCCC--CcEEeCCCCCcccccceEEE
Confidence 54 33333 89999999975321 357889999875 699998 9999999998777
Q ss_pred cCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCCcccccc
Q 041651 348 LPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFT 427 (557)
Q Consensus 348 lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~ 427 (557)
+ +++||++||... . ....++++||++++ +|+.+++++.+|..|+++++ +++||++||.....
T Consensus 205 ~-~~~i~v~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~---- 266 (301)
T 2vpj_A 205 L-NDHIYVVGGFDG-T-------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS---- 266 (301)
T ss_dssp E-TTEEEEECCBCS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS----
T ss_pred E-CCEEEEEeCCCC-C-------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc----
Confidence 6 999999999762 1 12457999999999 99999999999999987766 99999999964321
Q ss_pred cccCCCcceEEEEcCCCC
Q 041651 428 NVVYPTDLSLEAYSPPYL 445 (557)
Q Consensus 428 ~~~~~~~~~vE~y~Ppyl 445 (557)
...++|+|+|..-
T Consensus 267 -----~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 267 -----LLSSIECYDPIID 279 (301)
T ss_dssp -----BEEEEEEEETTTT
T ss_pred -----ccccEEEEcCCCC
Confidence 1347999998764
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3.3e-30 Score=267.51 Aligned_cols=293 Identities=15% Similarity=0.115 Sum_probs=195.6
Q ss_pred ccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECC--CCcEEECccCC-Ccc
Q 041651 43 LHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVA--TNAYRPLMVQT-DTW 119 (557)
Q Consensus 43 ~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~l~~~~-~~~ 119 (557)
+++++..+..|++++.+++||++||.. + ..+.+||+. +++|+.++.++ ..+
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~----------~----------------~~~~~~d~~~~~~~W~~~~~~p~~~R 56 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSA----------G----------------TAWYKLDTQAKDKKWTALAAFPGGPR 56 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGG----------T----------------TCEEEEETTSSSCCEEECCCCTTCCC
T ss_pred CCCCCccccceEEEEECCEEEEEeCcC----------C----------------CeEEEEccccCCCCeeECCCCCCCcC
Confidence 445555556788877899999999863 1 137899998 49999999877 566
Q ss_pred cccCeecCCCcEEEEcCC-C--CC----CCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEcCcCCCc
Q 041651 120 CSSGSVLPNGTLVQSGGY-N--DG----DHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIGGRRQFN 191 (557)
Q Consensus 120 c~~~~~l~dG~i~v~GG~-~--~g----~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~ 191 (557)
+..+++..+++|||+||. . ++ .+++++||+. +++|+++++ |+ .+|..++++++ +++|||+||.+...
T Consensus 57 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~ 131 (357)
T 2uvk_A 57 DQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK---TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGVNQNI 131 (357)
T ss_dssp BSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT---TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECCCHHH
T ss_pred ccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC---CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCcCCCc
Confidence 666666779999999998 2 11 4789999999 899999986 88 99999988886 99999999976421
Q ss_pred -------eeEe-cCCCCCCCCCceeeec--ccccccccccCCccceEEEeeCCcEEEEEcCceEEEeCCCCeEEEEecCC
Q 041651 192 -------YEFY-PKSDEDLSFPQTFMLH--FLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEI 261 (557)
Q Consensus 192 -------~E~y-P~~~~~~~~~~w~~~~--~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp~t~~W~~~~p~l 261 (557)
.+.+ |.. +.|.... .+... ...|- --++.++||+.+++|+. ++++
T Consensus 132 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~-------------~~~~v~~yd~~~~~W~~-~~~~ 186 (357)
T 2uvk_A 132 FNGYFEDLNEAGKDS------TAIDKINAHYFDKK-----AEDYF-------------FNKFLLSFDPSTQQWSY-AGES 186 (357)
T ss_dssp HHHHHHHHHHHTTCH------HHHHHHHHHHHSSC-----GGGGC-------------CCCEEEEEETTTTEEEE-EEEC
T ss_pred CcccccchhhcCCcc------cchhhhhhhhcccc-----ccccC-------------CcccEEEEeCCCCcEEE-CCCC
Confidence 0011 110 0010000 00000 00000 00236799999999994 7777
Q ss_pred CCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCc
Q 041651 262 PGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPR 340 (557)
Q Consensus 262 p~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R 340 (557)
|. +|.+. .+++++ +++||++||...... .++.+++||+...+++|+.. +|+.+|
T Consensus 187 p~--~~~~~-~~~~~~------------~~~iyv~GG~~~~~~----------~~~~v~~~d~d~~~~~W~~~~~~~~~~ 241 (357)
T 2uvk_A 187 PW--YGTAG-AAVVNK------------GDKTWLINGEAKPGL----------RTDAVFELDFTGNNLKWNKLAPVSSPD 241 (357)
T ss_dssp SS--CCCBS-CEEEEE------------TTEEEEECCEEETTE----------ECCCEEEEECC---CEEEECCCSSTTT
T ss_pred CC--CCccc-ccEEEE------------CCEEEEEeeecCCCc----------ccCceEEEEecCCCCcEEecCCCCCCc
Confidence 75 34431 133333 899999999752111 25667788874334799997 887775
Q ss_pred e--eeeEEEcCCCeEEEEcCcCCCCC------C--c-ccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceecc
Q 041651 341 V--MGDMILLPNGDVIIINGAQLGTA------G--W-ELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLT 409 (557)
Q Consensus 341 ~--~~~~v~lpdG~I~vvGG~~~g~~------g--~-~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llp 409 (557)
. .++++++ +++|||+||...... + | ......+.++++|||+++ +|+.+++|+.+|.+|+++++
T Consensus 242 ~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-- 315 (357)
T 2uvk_A 242 GVAGGFAGIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW-- 315 (357)
T ss_dssp CCBSCEEEEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--
T ss_pred ccccceEEEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--
Confidence 4 5555554 999999999742100 0 0 001123457899999999 99999999999999977665
Q ss_pred CCcEEEecCCCCc
Q 041651 410 DGRVLIGGSNPHI 422 (557)
Q Consensus 410 dG~V~v~GG~~~~ 422 (557)
+++|||+||....
T Consensus 316 ~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 316 NNSLLIIGGETAG 328 (357)
T ss_dssp TTEEEEEEEECGG
T ss_pred CCEEEEEeeeCCC
Confidence 9999999997543
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=262.48 Aligned_cols=252 Identities=15% Similarity=0.149 Sum_probs=188.2
Q ss_pred EEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCC----CC----CCeEEEEcCCCCCCCceecCCcccccccC
Q 041651 99 SILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYN----DG----DHVVRTFTPCDDDQCDWIELPQHLSERRW 169 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~----~g----~~~v~~ydp~~~~t~~W~~~~~~m~~~R~ 169 (557)
+.+|||.+++|+..+.. +..++.+.++..+++||++||.. .. .+.+++||+. +++|+.+++ |+.+|.
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~ 90 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL---DSEWLGMPP-LPSPRC 90 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT---TTEEEECCC-BSSCEE
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC---CCeEEECCC-CCcchh
Confidence 78999999999863222 23455556667799999999952 11 1358999999 899999986 999999
Q ss_pred cceEEEecCCcEEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEeC
Q 041651 170 YATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDY 249 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp 249 (557)
.|+++++ +++|||+||.+... . .. .. ++.++||+
T Consensus 91 ~~~~~~~-~~~lyv~GG~~~~~-----~-------~~--------~~-------------------------~~~~~~d~ 124 (315)
T 4asc_A 91 LFGLGEA-LNSIYVVGGREIKD-----G-------ER--------CL-------------------------DSVMCYDR 124 (315)
T ss_dssp SCEEEEE-TTEEEEECCEESST-----T-------CC--------BC-------------------------CCEEEEET
T ss_pred ceeEEEE-CCEEEEEeCCcCCC-----C-------Cc--------cc-------------------------ceEEEECC
Confidence 9999988 89999999964210 0 00 00 12469999
Q ss_pred CCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCC
Q 041651 250 KQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANP 329 (557)
Q Consensus 250 ~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~ 329 (557)
.+++|. .++++|. +|..+ +++++ +++||++||...+. ..++++++||+.. +
T Consensus 125 ~~~~W~-~~~~~p~--~r~~~--~~~~~------------~~~iyv~GG~~~~~----------~~~~~~~~yd~~~--~ 175 (315)
T 4asc_A 125 LSFKWG-ESDPLPY--VVYGH--TVLSH------------MDLVYVIGGKGSDR----------KCLNKMCVYDPKK--F 175 (315)
T ss_dssp TTTEEE-ECCCCSS--CCBSC--EEEEE------------TTEEEEECCBCTTS----------CBCCCEEEEETTT--T
T ss_pred CCCcEe-ECCCCCC--cccce--eEEEE------------CCEEEEEeCCCCCC----------cccceEEEEeCCC--C
Confidence 999998 5888876 57654 33333 89999999974221 1367889999875 6
Q ss_pred cceee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceec
Q 041651 330 SWVME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILL 408 (557)
Q Consensus 330 ~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~ll 408 (557)
+|+.. +||.+|..|+++++ +++|||+||... . .....+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~- 242 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH-DGRIIVAAGVTD-T-------GLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL- 242 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEEEEECS-S-------SEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE-
T ss_pred eEEECCCCCCchhceEEEEE-CCEEEEEeccCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceeEEEE-
Confidence 99998 99999999988776 999999999762 1 12357999999999 99999999999999987766
Q ss_pred cCCcEEEecCCCCcccccccccC--CCcceEEEEcCCCC
Q 041651 409 TDGRVLIGGSNPHIYYNFTNVVY--PTDLSLEAYSPPYL 445 (557)
Q Consensus 409 pdG~V~v~GG~~~~~~~~~~~~~--~~~~~vE~y~Ppyl 445 (557)
+++||++||...... .++ ++ -...++|+|+|..-
T Consensus 243 -~~~l~v~GG~~~~~~-~~~-~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 243 -VGTLYAIGGFATLET-ESG-ELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp -TTEEEEEEEEEEEEC-TTS-CEEEEEEEEEEEEETTTT
T ss_pred -CCEEEEECCccccCc-CCc-cccccccCcEEEecCCCC
Confidence 999999999643110 000 00 01347999999874
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=1e-27 Score=245.07 Aligned_cols=251 Identities=14% Similarity=0.114 Sum_probs=185.7
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc--cccCcceEEEecCCcEEEEcCcC----CC------ceeEe
Q 041651 128 NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS--ERRWYATNQILPDGRIIIIGGRR----QF------NYEFY 195 (557)
Q Consensus 128 dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~--~~R~y~s~~~L~dG~vyvvGG~~----~~------~~E~y 195 (557)
++.||++||. .+++|||. +++|... + |+ .+|..++++++ +++||++||.. .. .++.|
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~---~~~W~~~-~-~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM---ENECYLT-A-LAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT---TTEEEEE-E-ECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhcccc-----ceEEECCC---CCceecc-c-CCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEE
Confidence 5689999995 48999999 8999984 3 54 68988877766 99999999952 11 25677
Q ss_pred -cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC---------ceEEEeCCCCeEEEEecCCCCCC
Q 041651 196 -PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT---------RSILFDYKQNKVLKEYPEIPGAD 265 (557)
Q Consensus 196 -P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~---------~~~~yDp~t~~W~~~~p~lp~~~ 265 (557)
|.+ .+|..++.+.. ..+-+..++.+++||++||. +.++||+.+++|. .++++|.
T Consensus 84 d~~~------~~W~~~~~~p~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-- 147 (318)
T 2woz_A 84 DNVS------SEWVGLPPLPS-------ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI-- 147 (318)
T ss_dssp ETTT------TEEEECSCBSS-------CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS--
T ss_pred eCCC------CcEEECCCCCc-------cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC--
Confidence 763 48886654322 12346667779999999984 3789999999999 5888875
Q ss_pred CCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeee
Q 041651 266 PRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGD 344 (557)
Q Consensus 266 ~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~ 344 (557)
+|..+ ++++. +++||++||...+. ...+++++||+.. ++|+.. +|+.+|..|+
T Consensus 148 ~r~~~--~~~~~------------~~~iyv~GG~~~~~----------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~ 201 (318)
T 2woz_A 148 KVYGH--NVISH------------NGMIYCLGGKTDDK----------KCTNRVFIYNPKK--GDWKDLAPMKTPRSMFG 201 (318)
T ss_dssp CEESC--EEEEE------------TTEEEEECCEESSS----------CBCCCEEEEETTT--TEEEEECCCSSCCBSCE
T ss_pred ccccc--EEEEE------------CCEEEEEcCCCCCC----------CccceEEEEcCCC--CEEEECCCCCCCcccce
Confidence 57654 33332 89999999974221 1357889999875 699998 9999999998
Q ss_pred EEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCCccc
Q 041651 345 MILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYY 424 (557)
Q Consensus 345 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~ 424 (557)
++++ +++|||+||... . .....+++|||+++ +|+.+++++.+|..|+++++ +++||++||......
T Consensus 202 ~~~~-~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 267 (318)
T 2woz_A 202 VAIH-KGKIVIAGGVTE-D-------GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQL 267 (318)
T ss_dssp EEEE-TTEEEEEEEEET-T-------EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC-
T ss_pred EEEE-CCEEEEEcCcCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECCeeccCC
Confidence 8776 999999999762 1 12347899999999 99999999999999977766 999999999654210
Q ss_pred ccccc-cCCCcceEEEEcCCCCC
Q 041651 425 NFTNV-VYPTDLSLEAYSPPYLS 446 (557)
Q Consensus 425 ~~~~~-~~~~~~~vE~y~Ppyl~ 446 (557)
. ++. .......+++|+|....
T Consensus 268 ~-~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 268 E-SKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp ----CCBCCBCCCEEEEETTTTE
T ss_pred C-CceeccceeeeEEEEeCCCCE
Confidence 0 000 00013479999998743
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=6.4e-28 Score=271.24 Aligned_cols=293 Identities=13% Similarity=0.164 Sum_probs=202.4
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCCC--------CCCeEEEEcCCCCCCCceecCCcccccccC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYND--------GDHVVRTFTPCDDDQCDWIELPQHLSERRW 169 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~--------g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~ 169 (557)
...|||.+++|+++..++. ...+.++++ +|+||++||... +...+++|||. +++|+.++. |+.+|.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~---t~~w~~~~~-~~~~~~ 242 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS---TGIVSDRTV-TVTKHD 242 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT---TCCBCCCEE-EECSCC
T ss_pred cccCCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC---CCcEEeCcc-cCCCCC
Confidence 5578999999998877654 233445565 999999999742 12378999999 899999975 888775
Q ss_pred cce--EEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc-----
Q 041651 170 YAT--NQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN----- 241 (557)
Q Consensus 170 y~s--~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg----- 241 (557)
.++ ++++.||+||++||.+..++++| |.+ ++|..++.+.. ...|+.+.+++||+||++||
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t------~~W~~~~~~~~------~R~~~s~~~~~dg~iyv~GG~~~~~ 310 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS------DSWIPGPDMQV------ARGYQSSATMSDGRVFTIGGSWSGG 310 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGG------TEEEECCCCSS------CCSSCEEEECTTSCEEEECCCCCSS
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcC------CceeECCCCCc------cccccceEEecCCeEEEEeCcccCC
Confidence 554 66677999999999887789999 873 38986654432 23455666667999999999
Q ss_pred ---CceEEEeCCCCeEEEEec-----CCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCcccccccccccc
Q 041651 242 ---TRSILFDYKQNKVLKEYP-----EIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFI 313 (557)
Q Consensus 242 ---~~~~~yDp~t~~W~~~~p-----~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~ 313 (557)
++.|+||+++++|.. ++ +|+. .|. . +..+. ++++|++||.+...+. .
T Consensus 311 ~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~--~~~-~--~~~~~------------~~~iyv~Gg~~g~~~~------~- 365 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTS-LPNAKVNPMLT--ADK-Q--GLYRS------------DNHAWLFGWKKGSVFQ------A- 365 (656)
T ss_dssp SCCCCEEEEETTTTEEEE-ETTSCSGGGCC--CCT-T--GGGTT------------TCSCCEEECGGGCEEE------C-
T ss_pred cccccceEeCCCCCccee-CCCcccccccc--ccc-c--ceeec------------CCceEEEECCCCcEEE------e-
Confidence 358999999999984 63 3332 222 1 22221 7899999997532110 1
Q ss_pred ccCCceEEEEecCCCCcceee--cCCC------CceeeeEEE--cCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCC
Q 041651 314 RAISTCGRLVVSHANPSWVME--EMPL------PRVMGDMIL--LPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSE 383 (557)
Q Consensus 314 pa~~s~~~~d~~~~~~~W~~~--~M~~------~R~~~~~v~--lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t 383 (557)
-..+++++||+.. ++|... .++. +|..+.+++ ..+|+|||+||... ..+. ...+....+++|||.+
T Consensus 366 ~~~~~v~~yd~~~--~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 366 GPSTAMNWYYTSG--SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DATTNAHIITLGEPGT 441 (656)
T ss_dssp CSSSEEEEEECST--TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BCCCCEEEEECCSTTS
T ss_pred cCccceeeeecCC--cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-CcCCcceEEEcCCCCC
Confidence 1256789999876 577643 3333 344555554 35899999999752 1110 0111223689999999
Q ss_pred CCCCceEecC--CCCCcccccccceeccCCcEEEecCCCCcccccccccCCCcceEEEEcCCC
Q 041651 384 QTSRRFSVME--PSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPY 444 (557)
Q Consensus 384 ~~g~~W~~~~--~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppy 444 (557)
+ +|+.+. +|+.+|..|+ +++++||+||++||..... .+.+.+. ..++|+|+|..
T Consensus 442 ~---~W~~~~~~~mp~~R~~~~-~~~l~~g~i~v~GG~~~~~-~~~~~~~--~~~v~~ydp~t 497 (656)
T 1k3i_A 442 S---PNTVFASNGLYFARTFHT-SVVLPDGSTFITGGQRRGI-PFEDSTP--VFTPEIYVPEQ 497 (656)
T ss_dssp C---CEEEECTTCCSSCCBSCE-EEECTTSCEEEECCBSBCC-TTCCCSB--CCCCEEEEGGG
T ss_pred C---CeeEEccCCCCCCcccCC-eEECCCCCEEEECCcccCc-CcCCCCc--ccceEEEcCCC
Confidence 9 999886 9999999995 5567999999999964321 0111011 45799999976
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.94 E-value=1.2e-25 Score=254.13 Aligned_cols=268 Identities=13% Similarity=0.111 Sum_probs=187.2
Q ss_pred ceEEccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECc-c---
Q 041651 39 EWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLM-V--- 114 (557)
Q Consensus 39 ~W~~~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~-~--- 114 (557)
+|...+. .+.+..++++..+++||++||... . ....+.+||+.+++|+.++ .
T Consensus 378 ~~~~~~~-~p~rr~g~~~~~~~~iyv~GG~~~--~---------------------~~~~v~~yd~~~~~W~~~~~~~p~ 433 (695)
T 2zwa_A 378 QLLECEC-PINRKFGDVDVAGNDVFYMGGSNP--Y---------------------RVNEILQLSIHYDKIDMKNIEVSS 433 (695)
T ss_dssp EEEECCC-TTCCBSCEEEECSSCEEEECCBSS--S---------------------BCCCEEEEEECSSCEEEEECCCCC
T ss_pred eEeccCC-CCCCceeEEEEECCEEEEECCCCC--C---------------------CcCcEEEEECCCCeEEEeccCCCC
Confidence 4555543 334444455547999999999741 0 1234889999999999987 3
Q ss_pred --CCC-cccccCeecC-CCcEEEEcCCCCC---CCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCc
Q 041651 115 --QTD-TWCSSGSVLP-NGTLVQSGGYNDG---DHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGR 187 (557)
Q Consensus 115 --~~~-~~c~~~~~l~-dG~i~v~GG~~~g---~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~ 187 (557)
++. +.+++.+++. +|+|||+||.... .+++++||+. +++|+.+++ |+.+|++|+++++.+|+|||+||.
T Consensus 434 ~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~---t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv~GG~ 509 (695)
T 2zwa_A 434 SEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK---TREWSMIKS-LSHTRFRHSACSLPDGNVLILGGV 509 (695)
T ss_dssp SCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT---TTEEEECCC-CSBCCBSCEEEECTTSCEEEECCB
T ss_pred CCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC---CCcEEECCC-CCCCcccceEEEEcCCEEEEECCC
Confidence 333 4444444444 9999999997542 4789999999 899999986 999999999998779999999996
Q ss_pred CCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEeCCCCeEEEEecC---CCCC
Q 041651 188 RQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPE---IPGA 264 (557)
Q Consensus 188 ~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp~t~~W~~~~p~---lp~~ 264 (557)
+... +.++||+.+++|.. +++ +|.
T Consensus 510 ~~~~---------------------------------------------------~v~~yd~~t~~W~~-~~~~g~~p~- 536 (695)
T 2zwa_A 510 TEGP---------------------------------------------------AMLLYNVTEEIFKD-VTPKDEFFQ- 536 (695)
T ss_dssp CSSC---------------------------------------------------SEEEEETTTTEEEE-CCCSSGGGG-
T ss_pred CCCC---------------------------------------------------CEEEEECCCCceEE-ccCCCCCCC-
Confidence 4310 14589999999984 765 554
Q ss_pred CCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCc------ceee-cC-
Q 041651 265 DPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPS------WVME-EM- 336 (557)
Q Consensus 265 ~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~------W~~~-~M- 336 (557)
+|..+ +++++ .. - .++||++||...+.. ..++++++||+.. ++ |+.. +|
T Consensus 537 -~r~~~--~a~v~-~~----~----~~~iyv~GG~~~~~~---------~~~~~v~~yd~~~--~~w~~~~~W~~~~~~p 593 (695)
T 2zwa_A 537 -NSLVS--AGLEF-DP----V----SKQGIILGGGFMDQT---------TVSDKAIIFKYDA--ENATEPITVIKKLQHP 593 (695)
T ss_dssp -SCCBS--CEEEE-ET----T----TTEEEEECCBCTTSS---------CBCCEEEEEEECT--TCSSCCEEEEEEEECG
T ss_pred -cccce--eEEEE-eC----C----CCEEEEECCcCCCCC---------eeeCcEEEEEccC--CccccceEEEEcCCCC
Confidence 56654 33443 10 0 289999999753210 1357889999986 46 8877 76
Q ss_pred CCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCC--------cccccccceec
Q 041651 337 PLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTR--------PRMYHSSAILL 408 (557)
Q Consensus 337 ~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~--------~R~yhs~a~ll 408 (557)
+.+|..|+++++-+|+|||+||... .. .......+++|||.++ +|+.+ +++. .|..|+ ++.+
T Consensus 594 ~~~R~~~~~~~~~~~~iyv~GG~~~-~~----~~~~~~~v~~yd~~t~---~W~~~-~~p~~~~~~~~p~~~gh~-~~~~ 663 (695)
T 2zwa_A 594 LFQRYGSQIKYITPRKLLIVGGTSP-SG----LFDRTNSIISLDPLSE---TLTSI-PISRRIWEDHSLMLAGFS-LVST 663 (695)
T ss_dssp GGCCBSCEEEEEETTEEEEECCBCS-SC----CCCTTTSEEEEETTTT---EEEEC-CCCHHHHHHSCCCCSSCE-EECC
T ss_pred CCCcccceEEEeCCCEEEEECCccC-CC----CCCCCCeEEEEECCCC---eEEEe-eccccccCCCCccceeee-EEEe
Confidence 5899999888773399999999752 11 0123457999999999 99954 2221 244575 4556
Q ss_pred cCCcEEEecCCC
Q 041651 409 TDGRVLIGGSNP 420 (557)
Q Consensus 409 pdG~V~v~GG~~ 420 (557)
.+|+|||+||+.
T Consensus 664 ~~g~i~v~GGg~ 675 (695)
T 2zwa_A 664 SMGTIHIIGGGA 675 (695)
T ss_dssp ---CEEEECCEE
T ss_pred CCCEEEEEeCCc
Confidence 778999999964
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.93 E-value=1.9e-25 Score=231.65 Aligned_cols=272 Identities=14% Similarity=0.176 Sum_probs=182.9
Q ss_pred CCCCCCCCC--CCceEEccCCc-ccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEEC
Q 041651 28 QVLPPYAGS--QGEWNLLHESI-GISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDV 104 (557)
Q Consensus 28 ~~~~~~~~~--~g~W~~~~~~~-~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp 104 (557)
..+..||.. .++|+.+++++ ..+..|++++.+++||++||..... ++.. .....+++||+
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~------~~~~-----------~~~~~v~~yd~ 93 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS------EGLT-----------QVFNDVHKYNP 93 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT------TSCE-----------EECCCEEEEET
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC------Cccc-----------eeeccEEEEeC
Confidence 467788887 49999998876 5677888888899999999972100 0100 02345899999
Q ss_pred CCCcEEECccCC-CcccccCeecCCCcEEEEcCCCC------------------------------------CCCeEEEE
Q 041651 105 ATNAYRPLMVQT-DTWCSSGSVLPNGTLVQSGGYND------------------------------------GDHVVRTF 147 (557)
Q Consensus 105 ~t~~w~~l~~~~-~~~c~~~~~l~dG~i~v~GG~~~------------------------------------g~~~v~~y 147 (557)
.+++|+.++.+. ..++...++..+++||++||... -.+++++|
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 999999998765 55555555558999999999742 13789999
Q ss_pred cCCCCCCCceecCCcccccccCc-ceEEEecCCcEEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccc
Q 041651 148 TPCDDDQCDWIELPQHLSERRWY-ATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYP 226 (557)
Q Consensus 148 dp~~~~t~~W~~~~~~m~~~R~y-~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp 226 (557)
||. +++|+.+++ |+.+|.+ ++++++ +++|||+||.+.... ...
T Consensus 174 d~~---~~~W~~~~~-~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~----------------------~~~--------- 217 (357)
T 2uvk_A 174 DPS---TQQWSYAGE-SPWYGTAGAAVVNK-GDKTWLINGEAKPGL----------------------RTD--------- 217 (357)
T ss_dssp ETT---TTEEEEEEE-CSSCCCBSCEEEEE-TTEEEEECCEEETTE----------------------ECC---------
T ss_pred eCC---CCcEEECCC-CCCCCcccccEEEE-CCEEEEEeeecCCCc----------------------ccC---------
Confidence 999 899999975 9987766 777777 999999999643210 000
Q ss_pred eEEEeeCCcEEEEEcCceEEEe--CCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccc
Q 041651 227 FVHLLPDGNLFIFANTRSILFD--YKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASF 304 (557)
Q Consensus 227 ~~~~~~~G~ifv~gg~~~~~yD--p~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~ 304 (557)
+.++|| +.+++|. .++++|. +|....+.++++ +++||++||......
T Consensus 218 ----------------~v~~~d~d~~~~~W~-~~~~~~~--~~~~~~~~~~~~------------~~~iyv~GG~~~~~~ 266 (357)
T 2uvk_A 218 ----------------AVFELDFTGNNLKWN-KLAPVSS--PDGVAGGFAGIS------------NDSLIFAGGAGFKGS 266 (357)
T ss_dssp ----------------CEEEEECC---CEEE-ECCCSST--TTCCBSCEEEEE------------TTEEEEECCEECTTH
T ss_pred ----------------ceEEEEecCCCCcEE-ecCCCCC--CcccccceEEEE------------CCEEEEEcCccccCC
Confidence 123676 4999998 5887764 343221123332 899999999642110
Q ss_pred cc--ccccc--c--cccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccE
Q 041651 305 AL--ATQGV--F--IRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPI 377 (557)
Q Consensus 305 ~~--~~~~~--~--~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e 377 (557)
.. ..... + .....++++||+.. ++|+.. +||.+|..|.++++ +++|||+||.+. . ...+.+++
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~------~~~~~~v~ 336 (357)
T 2uvk_A 267 RENYQNGKNYAHEGLKKSYSTDIHLWHN--GKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETA-G------GKAVTDSV 336 (357)
T ss_dssp HHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEE-TTEEEEEEEECG-G------GCEEEEEE
T ss_pred cccccccceeccccccceeeEEEEecCC--CceeeCCCCCCCcccceeEEe-CCEEEEEeeeCC-C------CCEeeeEE
Confidence 00 00000 0 01235678999875 699998 99999999887765 999999999762 1 11235789
Q ss_pred EEcCCCCCCCceEecCCCC
Q 041651 378 IYRPSEQTSRRFSVMEPST 396 (557)
Q Consensus 378 ~YDP~t~~g~~W~~~~~~~ 396 (557)
+|+.+++ +|.+..+.+
T Consensus 337 ~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 337 LITVKDN---KVTVQNLEH 352 (357)
T ss_dssp EEEC-CC---SCEEEC---
T ss_pred EEEEcCc---EeEeeeccc
Confidence 9999999 999876654
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.89 E-value=3.2e-22 Score=226.14 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=172.5
Q ss_pred cEEECccCCCcccccCeecCCCcEEEEcCCCC-CCCeEEEEcCCCCCCCceecCC-c----ccccccCcceEEEec-CCc
Q 041651 108 AYRPLMVQTDTWCSSGSVLPNGTLVQSGGYND-GDHVVRTFTPCDDDQCDWIELP-Q----HLSERRWYATNQILP-DGR 180 (557)
Q Consensus 108 ~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~-g~~~v~~ydp~~~~t~~W~~~~-~----~m~~~R~y~s~~~L~-dG~ 180 (557)
+|...+..+.++.+ +++..+++||++||... ..+++++||+. +++|+.++ + .|+.+|++|+++++. +|+
T Consensus 378 ~~~~~~~~p~rr~g-~~~~~~~~iyv~GG~~~~~~~~v~~yd~~---~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ 453 (695)
T 2zwa_A 378 QLLECECPINRKFG-DVDVAGNDVFYMGGSNPYRVNEILQLSIH---YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ 453 (695)
T ss_dssp EEEECCCTTCCBSC-EEEECSSCEEEECCBSSSBCCCEEEEEEC---SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE
T ss_pred eEeccCCCCCCcee-EEEEECCEEEEECCCCCCCcCcEEEEECC---CCeEEEeccCCCCCCCCccccceEEEEEccCCE
Confidence 34444333344433 34447999999999743 24689999999 89999876 2 388999999999887 899
Q ss_pred EEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEeCCCCeEEEEecC
Q 041651 181 IIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPE 260 (557)
Q Consensus 181 vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp~t~~W~~~~p~ 260 (557)
|||+||.+... . .. +++++||+.+++|. .+++
T Consensus 454 lyv~GG~~~~~--------------~--------~~-------------------------~dv~~yd~~t~~W~-~~~~ 485 (695)
T 2zwa_A 454 LLLIGGRKAPH--------------Q--------GL-------------------------SDNWIFDMKTREWS-MIKS 485 (695)
T ss_dssp EEEECCBSSTT--------------C--------BC-------------------------CCCEEEETTTTEEE-ECCC
T ss_pred EEEEcCCCCCC--------------C--------cc-------------------------ccEEEEeCCCCcEE-ECCC
Confidence 99999976421 0 00 02469999999999 5888
Q ss_pred CCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-c---C
Q 041651 261 IPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-E---M 336 (557)
Q Consensus 261 lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~---M 336 (557)
||. +|..| +++++. +++|||+||.+.. . ++++||+.. ++|+.. + |
T Consensus 486 ~p~--~R~~h---~~~~~~----------~~~iyv~GG~~~~-------------~-~v~~yd~~t--~~W~~~~~~g~~ 534 (695)
T 2zwa_A 486 LSH--TRFRH---SACSLP----------DGNVLILGGVTEG-------------P-AMLLYNVTE--EIFKDVTPKDEF 534 (695)
T ss_dssp CSB--CCBSC---EEEECT----------TSCEEEECCBCSS-------------C-SEEEEETTT--TEEEECCCSSGG
T ss_pred CCC--Ccccc---eEEEEc----------CCEEEEECCCCCC-------------C-CEEEEECCC--CceEEccCCCCC
Confidence 875 67765 333322 8899999997521 1 678888875 699986 4 9
Q ss_pred CCCceeeeEEEcCC---CeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCc------eEecCCC-CCcccccccce
Q 041651 337 PLPRVMGDMILLPN---GDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRR------FSVMEPS-TRPRMYHSSAI 406 (557)
Q Consensus 337 ~~~R~~~~~v~lpd---G~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~------W~~~~~~-~~~R~yhs~a~ 406 (557)
|.+|..|+++++ + ++|||+||..... ......+++|||.++ + |+.+.++ +.+|..|++++
T Consensus 535 p~~r~~~~a~v~-~~~~~~iyv~GG~~~~~------~~~~~~v~~yd~~~~---~w~~~~~W~~~~~~p~~~R~~~~~~~ 604 (695)
T 2zwa_A 535 FQNSLVSAGLEF-DPVSKQGIILGGGFMDQ------TTVSDKAIIFKYDAE---NATEPITVIKKLQHPLFQRYGSQIKY 604 (695)
T ss_dssp GGSCCBSCEEEE-ETTTTEEEEECCBCTTS------SCBCCEEEEEEECTT---CSSCCEEEEEEEECGGGCCBSCEEEE
T ss_pred CCcccceeEEEE-eCCCCEEEEECCcCCCC------CeeeCcEEEEEccCC---ccccceEEEEcCCCCCCCcccceEEE
Confidence 999999986665 5 8999999975211 123457999999999 8 8988876 58999997665
Q ss_pred eccCCcEEEecCCCCcccccccccCCCcceEEEEcCCCC
Q 041651 407 LLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL 445 (557)
Q Consensus 407 llpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl 445 (557)
+ .||+||++||...... ......+++|+|...
T Consensus 605 ~-~~~~iyv~GG~~~~~~------~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 605 I-TPRKLLIVGGTSPSGL------FDRTNSIISLDPLSE 636 (695)
T ss_dssp E-ETTEEEEECCBCSSCC------CCTTTSEEEEETTTT
T ss_pred e-CCCEEEEECCccCCCC------CCCCCeEEEEECCCC
Confidence 4 3499999999643311 011347999999875
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.08 E-value=0.0042 Score=61.22 Aligned_cols=247 Identities=11% Similarity=0.123 Sum_probs=127.7
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc-cCcceEEEec
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER-RWYATNQILP 177 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~-R~y~s~~~L~ 177 (557)
+.+||..+++....-..+.......+..++|+++++|+.+ ..+++||.. +.+-.. . +... ..-.+++.-+
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~---~~~~~~--~-~~~~~~~v~~~~~~~ 117 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS---SGKCLK--T-LKGHSNYVFCCNFNP 117 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEECS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC---CCcEEE--E-EcCCCCCEEEEEEcC
Confidence 7789998887765433333333445667899999999863 579999987 433211 1 2211 1223445567
Q ss_pred CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeE
Q 041651 178 DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKV 254 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W 254 (557)
+++.++.|+.++ .+.+| ... + ..-..+. .... .--.+...++|++++.|+. ...+||..+.+.
T Consensus 118 ~~~~l~s~~~d~-~i~iwd~~~--~---~~~~~~~---~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 118 QSNLIVSGSFDE-SVRIWDVKT--G---KCLKTLP---AHSD-----PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SSSEEEEEETTS-CEEEEETTT--C---CEEEEEC---CCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEeCCC-cEEEEECCC--C---EEEEEec---CCCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 899999888765 35566 331 0 0111111 0000 0012334568998888875 467899988776
Q ss_pred EEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee
Q 041651 255 LKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME 334 (557)
Q Consensus 255 ~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~ 334 (557)
...+.. . ...+ ......-| +++.+++|+.+. .+..+|+..........
T Consensus 184 ~~~~~~--~---~~~~-~~~~~~~~----------~~~~l~~~~~d~----------------~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 184 LKTLID--D---DNPP-VSFVKFSP----------NGKYILAATLDN----------------TLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEECC--S---SCCC-EEEEEECT----------TSSEEEEEETTT----------------EEEEEETTTTEEEEEEC
T ss_pred eeEEec--c---CCCc-eEEEEECC----------CCCEEEEEcCCC----------------eEEEEECCCCcEEEEEE
Confidence 543311 0 1110 01112212 677778877542 12233332110000000
Q ss_pred cC-CCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccCCc
Q 041651 335 EM-PLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTDGR 412 (557)
Q Consensus 335 ~M-~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpdG~ 412 (557)
.. ............+++++++.|+.+ | .+.+||..+. +-. .+.. ..... ......|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~-h~~~v--~~~~~~p~~~ 292 (312)
T 4ery_A 232 GHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQG-HTDVV--ISTACHPTEN 292 (312)
T ss_dssp SSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECC-CSSCE--EEEEECSSSS
T ss_pred ecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhc-cCCcE--EEEeecCcCC
Confidence 10 111111122334688999988765 2 5789998876 422 2221 11111 1234568999
Q ss_pred EEEecCC
Q 041651 413 VLIGGSN 419 (557)
Q Consensus 413 V~v~GG~ 419 (557)
+++.++.
T Consensus 293 ~l~s~~~ 299 (312)
T 4ery_A 293 IIASAAL 299 (312)
T ss_dssp EEEEEEC
T ss_pred ceEEEEc
Confidence 9988764
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.02 E-value=0.0018 Score=65.32 Aligned_cols=252 Identities=14% Similarity=0.212 Sum_probs=125.3
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc-cCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER-RWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~-R~y~s~~~L 176 (557)
.+.+||..+.+-...-..+.....+.+..++|+.+++||.+ ..+++||..+. ........ .+... ..-.++...
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~~~-~~~~~~~~-~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLKTR-EGNVRVSR-ELAGHTGYLSCCRFL 152 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTC-SBSCEEEE-EEECCSSCEEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECccC-CCcceeEE-EecCCCccEEEEEEC
Confidence 37889988766443222333333345566899999999874 57899998721 11111111 12211 122233344
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~ 253 (557)
++++ ++.|+.+ .++.+| ... + .. ...+.... ..--.+...++|++++.|+. ...+||..+.+
T Consensus 153 ~~~~-l~s~s~d-~~i~~wd~~~--~----~~--~~~~~~h~-----~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 153 DDNQ-IVTSSGD-TTCALWDIET--G----QQ--TTTFTGHT-----GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp ETTE-EEEEETT-SCEEEEETTT--T----EE--EEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCc-EEEEECC-CcEEEEECCC--C----cE--EEEEcCCC-----CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 5666 4555544 345566 331 1 11 11111100 00112345678999998874 47789998876
Q ss_pred EEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCccee
Q 041651 254 VLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVM 333 (557)
Q Consensus 254 W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~ 333 (557)
-...+ ... ...- -.....| +++.+++|+.+. ++..+|+.........
T Consensus 218 ~~~~~---~~h--~~~v--~~v~~~p----------~~~~l~s~s~d~----------------~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 218 CRQTF---TGH--ESDI--NAICFFP----------NGNAFATGSDDA----------------TCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEEE---CCC--SSCE--EEEEECT----------TSSEEEEEETTS----------------CEEEEETTTTEEEEEE
T ss_pred eEEEE---cCC--cCCE--EEEEEcC----------CCCEEEEEcCCC----------------cEEEEECCCCcEEEEE
Confidence 54333 211 1100 1122222 678888888652 2223333211000000
Q ss_pred ecCCC-CceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCc
Q 041651 334 EEMPL-PRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGR 412 (557)
Q Consensus 334 ~~M~~-~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~ 412 (557)
.... ...-.+...-|+|+++++|+.+ | .+.+||..+.. .-..+... ..+. .+....|||+
T Consensus 265 -~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h-~~~v--~~~~~s~dg~ 325 (340)
T 1got_B 265 -SHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGH-DNRV--SCLGVTDDGM 325 (340)
T ss_dssp -CCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECC-SSCE--EEEEECTTSS
T ss_pred -ccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecC-CCcE--EEEEEcCCCC
Confidence 1010 0011223456899999998754 2 57899987651 22222211 1122 2244568999
Q ss_pred EEEecCCCC
Q 041651 413 VLIGGSNPH 421 (557)
Q Consensus 413 V~v~GG~~~ 421 (557)
.+++||.+.
T Consensus 326 ~l~s~s~D~ 334 (340)
T 1got_B 326 AVATGSWDS 334 (340)
T ss_dssp CEEEEETTS
T ss_pred EEEEEcCCc
Confidence 999998643
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.92 E-value=0.0097 Score=59.50 Aligned_cols=244 Identities=11% Similarity=0.134 Sum_probs=129.7
Q ss_pred EEEEECCCCcEEECcc--CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEE
Q 041651 99 SILYDVATNAYRPLMV--QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~ 175 (557)
+.+||..+++...... .+.....+....+++.+++.|+.+ ..+++||.. +.+-... +.. .....+++.
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~---~~~~~~~---~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE---NGKQIKS---IDAGPVDAWTLAF 130 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT---TTEEEEE---EECCTTCCCCEEE
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC---CCCEEEE---EeCCCccEEEEEE
Confidence 6788877665443211 222222234455788999999873 589999987 4432211 111 112234666
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCC
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQN 252 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~ 252 (557)
-+||+.++.|+.++ .+.+| ... + ..-..+. .. ....-.+...++|+.++.|+. ...+||..+.
T Consensus 131 spdg~~l~~g~~dg-~v~i~~~~~--~---~~~~~~~---~~-----~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 131 SPDSQYLATGTHVG-KVNIFGVES--G---KKEYSLD---TR-----GKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp CTTSSEEEEECTTS-EEEEEETTT--C---SEEEEEE---CS-----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCEEEEEcCCC-cEEEEEcCC--C---ceeEEec---CC-----CceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 78999999988654 44555 221 0 0101111 00 000112345679999998874 4678999988
Q ss_pred eEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcce
Q 041651 253 KVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWV 332 (557)
Q Consensus 253 ~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~ 332 (557)
+-...+ ... ..+- -.....| +++++++|+.+. .+..+|+... ...
T Consensus 197 ~~~~~~---~~h---~~~v-~~l~~sp----------d~~~l~s~s~dg----------------~i~iwd~~~~--~~~ 241 (321)
T 3ow8_A 197 KLLHTL---EGH---AMPI-RSLTFSP----------DSQLLVTASDDG----------------YIKIYDVQHA--NLA 241 (321)
T ss_dssp EEEEEE---CCC---SSCC-CEEEECT----------TSCEEEEECTTS----------------CEEEEETTTC--CEE
T ss_pred cEEEEE---ccc---CCce-eEEEEcC----------CCCEEEEEcCCC----------------eEEEEECCCc--cee
Confidence 765433 221 1110 1122222 778889888652 2223333211 111
Q ss_pred ee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccC
Q 041651 333 ME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTD 410 (557)
Q Consensus 333 ~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpd 410 (557)
.. .-...... +....|||+.++.|+.+ + ++.+||..+. +-. .+.. ..... ......||
T Consensus 242 ~~~~~h~~~v~-~~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~-h~~~v--~~v~~s~~ 301 (321)
T 3ow8_A 242 GTLSGHASWVL-NVAFCPDDTHFVSSSSD-K------------SVKVWDVGTR---TCVHTFFD-HQDQV--WGVKYNGN 301 (321)
T ss_dssp EEECCCSSCEE-EEEECTTSSEEEEEETT-S------------CEEEEETTTT---EEEEEECC-CSSCE--EEEEECTT
T ss_pred EEEcCCCCceE-EEEECCCCCEEEEEeCC-C------------cEEEEeCCCC---EEEEEEcC-CCCcE--EEEEECCC
Confidence 11 11112222 33456899999998765 2 5789998776 432 2211 11111 12445789
Q ss_pred CcEEEecCCC
Q 041651 411 GRVLIGGSNP 420 (557)
Q Consensus 411 G~V~v~GG~~ 420 (557)
|+.+++||.+
T Consensus 302 g~~l~s~~~d 311 (321)
T 3ow8_A 302 GSKIVSVGDD 311 (321)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEeCC
Confidence 9999998864
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.92 E-value=0.0062 Score=61.26 Aligned_cols=269 Identities=13% Similarity=0.054 Sum_probs=137.9
Q ss_pred ceEEEEECCCCcEEECccC------CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcee-cCCcccccccC
Q 041651 97 AHSILYDVATNAYRPLMVQ------TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWI-ELPQHLSERRW 169 (557)
Q Consensus 97 ~~~~~yDp~t~~w~~l~~~------~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~-~~~~~m~~~R~ 169 (557)
..+.+||++|+++...-.. ...+..+. .+.++++|++... ...+.++|+. +.+-. .++. ...++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i-~~~~~~lyv~~~~---~~~v~viD~~---t~~~~~~i~~-~~~p~- 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSM-VIRDGIGWIVVNN---SHVIFAIDIN---TFKEVGRITG-FTSPR- 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEE-EEETTEEEEEEGG---GTEEEEEETT---TCCEEEEEEC-CSSEE-
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEE-EEECCEEEEEEcC---CCEEEEEECc---ccEEEEEcCC-CCCCc-
Confidence 3588999999998753210 01122222 3357889888653 3579999998 55432 2221 22222
Q ss_pred cceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCcee-eecccccccccccCCccceEEEeeCCcEEEEE---cCce
Q 041651 170 YATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYPFVHLLPDGNLFIFA---NTRS 244 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g---g~~~ 244 (557)
.++.-+||++||.... ...+.++ +.+. +-. ..+.-.. ......|...+..++++|+.. ++..
T Consensus 88 --~i~~~~~g~lyv~~~~-~~~v~~iD~~t~------~~~~~i~~g~~----~~~~~~p~~i~~~~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 88 --YIHFLSDEKAYVTQIW-DYRIFIINPKTY------EITGYIECPDM----DMESGSTEQMVQYGKYVYVNCWSYQNRI 154 (328)
T ss_dssp --EEEEEETTEEEEEEBS-CSEEEEEETTTT------EEEEEEECTTC----CTTTCBCCCEEEETTEEEEEECTTCCEE
T ss_pred --EEEEeCCCeEEEEECC-CCeEEEEECCCC------eEEEEEEcCCc----cccCCCcceEEEECCEEEEEcCCCCCEE
Confidence 3444378999998743 2344555 4411 111 1111000 000013444445788999985 3457
Q ss_pred EEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEe
Q 041651 245 ILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVV 324 (557)
Q Consensus 245 ~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~ 324 (557)
.++|+++++..+.++. . ..+. +.+ +-| +|++|++.-..... ..|....+.+.+||+
T Consensus 155 ~viD~~t~~~~~~i~~---g---~~p~-~i~-~~~----------dG~l~v~~~~~~~~------~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI---G---IQPT-SLV-MDK----------YNKMWTITDGGYEG------SPYGYEAPSLYRIDA 210 (328)
T ss_dssp EEEETTTTEEEEEEEC---S---SCBC-CCE-ECT----------TSEEEEEBCCBCTT------CSSCBCCCEEEEEET
T ss_pred EEEECCCCeEEEEEEc---C---CCcc-ceE-EcC----------CCCEEEEECCCccC------CccccCCceEEEEEC
Confidence 8999999988765532 1 1121 222 212 78988876432100 011112356677776
Q ss_pred cCCCCcceee-cCCCCceeeeEEEcCCC-eEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCC-cccc
Q 041651 325 SHANPSWVME-EMPLPRVMGDMILLPNG-DVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTR-PRMY 401 (557)
Q Consensus 325 ~~~~~~W~~~-~M~~~R~~~~~v~lpdG-~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~-~R~y 401 (557)
.. .+.... .++....-.+.++-||| ++|+.++ .+.+||+++. +.....-... ...-
T Consensus 211 ~t--~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~~~~~~p 269 (328)
T 3dsm_A 211 ET--FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLEFRDTKY 269 (328)
T ss_dssp TT--TEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBCCCSSCE
T ss_pred CC--CeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeecCCCCce
Confidence 53 233322 44332222334455654 5666542 3578999887 5421111111 1222
Q ss_pred cccceecc-CCcEEEecCCCCcccccccccCCCcceEEEEcCC
Q 041651 402 HSSAILLT-DGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPP 443 (557)
Q Consensus 402 hs~a~llp-dG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Pp 443 (557)
.+ .++-| +|+|||+...+.. ...+|.+|+|.
T Consensus 270 ~g-i~vdp~~g~lyva~~~~y~----------~~~~V~v~d~~ 301 (328)
T 3dsm_A 270 YG-LTVNPNNGEVYVADAIDYQ----------QQGIVYRYSPQ 301 (328)
T ss_dssp EE-EEECTTTCCEEEEECTTSS----------SEEEEEEECTT
T ss_pred EE-EEEcCCCCeEEEEcccccc----------cCCEEEEECCC
Confidence 23 34556 8999999632111 13378889876
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.0072 Score=60.10 Aligned_cols=270 Identities=9% Similarity=0.011 Sum_probs=131.4
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+||..+++....-..+.....+.+..++|+.+++|+.+ ..+.+||.. +.+-... +.....-.+++..++
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~---~~~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVS---NGQCVAT---WKSPVPVKRVEFSPC 126 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETT---TCCEEEE---EECSSCEEEEEECTT
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC---CCcEEEE---eecCCCeEEEEEccC
Confidence 7789988876544322233333345566789999999863 579999987 4433221 223333455667778
Q ss_pred CcEEEEcCcC----CCceeEe-cCCCCCCCCCceeeec--ccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeC
Q 041651 179 GRIIIIGGRR----QFNYEFY-PKSDEDLSFPQTFMLH--FLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDY 249 (557)
Q Consensus 179 G~vyvvGG~~----~~~~E~y-P~~~~~~~~~~w~~~~--~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp 249 (557)
|+.+++++.+ ...+.+| ..... ......... .+............-.+...++|+.++.|+. ...+||.
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 204 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDS--ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDV 204 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECT--TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCc--cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 9998888765 1344455 22100 000111000 0000000000001123345578888888875 3678999
Q ss_pred CC-CeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCC
Q 041651 250 KQ-NKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHAN 328 (557)
Q Consensus 250 ~t-~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~ 328 (557)
.+ .+....+. .. .... ......| +++.+++|+.+. .+..+|+...
T Consensus 205 ~~~~~~~~~~~---~~--~~~v--~~~~~~~----------~~~~l~~~~~d~----------------~i~v~d~~~~- 250 (369)
T 3zwl_B 205 SNNYEYVDSID---LH--EKSI--SDMQFSP----------DLTYFITSSRDT----------------NSFLVDVSTL- 250 (369)
T ss_dssp TTTTEEEEEEE---CC--SSCE--EEEEECT----------TSSEEEEEETTS----------------EEEEEETTTC-
T ss_pred CCCcEeEEEEe---cC--CCce--eEEEECC----------CCCEEEEecCCc----------------eEEEEECCCC-
Confidence 88 44433232 11 1100 0112212 667777776542 2233443321
Q ss_pred CcceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcc-cCCCCccccEEEcCCCCCCCce-EecCCCCCcccccccce
Q 041651 329 PSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWE-LARGPMTRPIIYRPSEQTSRRF-SVMEPSTRPRMYHSSAI 406 (557)
Q Consensus 329 ~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~-~~~~~~~~~e~YDP~t~~g~~W-~~~~~~~~~R~yhs~a~ 406 (557)
+... .+............|+|+.+++|+...+..-+. ...+....+.+||..+. +- ..+.. ..... ....
T Consensus 251 -~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~-~~~~v--~~~~ 322 (369)
T 3zwl_B 251 -QVLK-KYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE---EEIGRVQG-HFGPL--NTVA 322 (369)
T ss_dssp -CEEE-EEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC---CEEEEEEC-CSSCE--EEEE
T ss_pred -ceee-eecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC---cchhheec-ccCcE--EEEE
Confidence 1111 111122223345678999999987652211100 01111236788998776 32 22211 11111 2345
Q ss_pred eccCCcEEEecCCCC
Q 041651 407 LLTDGRVLIGGSNPH 421 (557)
Q Consensus 407 llpdG~V~v~GG~~~ 421 (557)
+.|||+.+++|+.+.
T Consensus 323 ~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 323 ISPQGTSYASGGEDG 337 (369)
T ss_dssp ECTTSSEEEEEETTS
T ss_pred ECCCCCEEEEEcCCC
Confidence 678999999998754
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.87 E-value=0.0049 Score=61.73 Aligned_cols=137 Identities=9% Similarity=0.097 Sum_probs=76.3
Q ss_pred eEEEEECCCCcEEECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 98 HSILYDVATNAYRPLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
.+.+||..++++..+... +.....+.+..++|+.+++|+.+ ..+.+||.. +.++............-.+++.
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~---~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLK---GRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEE---TTEEEEEEECCCCSSCEEEEEE
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECC---CCeeeeeEEeecCCCceeEEEE
Confidence 378999999876555432 22223345566799999999863 468999987 5655433210112333345556
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCC
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYK 250 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~ 250 (557)
.++|+.+++|+.++ .+.+| ... ...+.....+.... ...--.+...++|+.++.|+. ...+||..
T Consensus 105 ~~~~~~l~~~~~d~-~v~i~d~~~-----~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 105 APNEKKFAVGSGSR-VISICYFEQ-----ENDWWVCKHIKKPI----RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CTTSSEEEEEETTS-SEEEEEEET-----TTTEEEEEEECTTC----CSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCCCCEEEEEeCCC-EEEEEEecC-----CCcceeeeeeeccc----CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 67899999988664 34455 221 11222111110000 000112344568998888874 46788853
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.85 E-value=0.0051 Score=60.45 Aligned_cols=245 Identities=13% Similarity=0.138 Sum_probs=127.7
Q ss_pred EEEEECCCCcEE----ECcc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcce
Q 041651 99 SILYDVATNAYR----PLMV-QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYAT 172 (557)
Q Consensus 99 ~~~yDp~t~~w~----~l~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s 172 (557)
+.+||..+++.. .+.. .+.....+.+..++|+.+++|+.. ..+.+||.. +.+...... +.. ...-.+
T Consensus 74 i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~---~~~~~~~~~-~~~~~~~i~~ 146 (337)
T 1gxr_A 74 VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA---APTPRIKAE-LTSSAPACYA 146 (337)
T ss_dssp EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC---CC--EEEEE-EECSSSCEEE
T ss_pred EEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC---CCCcceeee-cccCCCceEE
Confidence 778888765422 1111 122223345566799999998763 579999988 554322221 222 222334
Q ss_pred EEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeC
Q 041651 173 NQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDY 249 (557)
Q Consensus 173 ~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp 249 (557)
++..++|+.+++|+.++ .+.+| ... .+.. ..+.... ..--.+...++|+.++.++. ...+||.
T Consensus 147 ~~~~~~~~~l~~~~~dg-~v~~~d~~~------~~~~--~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSDG-NIAVWDLHN------QTLV--RQFQGHT-----DGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEECTTSSEEEEEETTS-CEEEEETTT------TEEE--EEECCCS-----SCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEECCCCCEEEEEeCCC-cEEEEeCCC------Ccee--eeeeccc-----CceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 55667899999888654 35556 321 0111 0010000 00112344568988888874 4678999
Q ss_pred CCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCC
Q 041651 250 KQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANP 329 (557)
Q Consensus 250 ~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~ 329 (557)
++.+-..... .+. .. ......| +++.+++|+.+. .+..+|+... .
T Consensus 213 ~~~~~~~~~~-~~~---~v----~~~~~s~----------~~~~l~~~~~~~----------------~i~~~~~~~~-~ 257 (337)
T 1gxr_A 213 REGRQLQQHD-FTS---QI----FSLGYCP----------TGEWLAVGMESS----------------NVEVLHVNKP-D 257 (337)
T ss_dssp TTTEEEEEEE-CSS---CE----EEEEECT----------TSSEEEEEETTS----------------CEEEEETTSS-C
T ss_pred CCCceEeeec-CCC---ce----EEEEECC----------CCCEEEEEcCCC----------------cEEEEECCCC-C
Confidence 8887553331 111 11 1122222 677788877542 2333443321 1
Q ss_pred cceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceecc
Q 041651 330 SWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLT 409 (557)
Q Consensus 330 ~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llp 409 (557)
..+. .-..... .+....|||+++++++.+ | .+.+||..+. +-..... .... -....+.|
T Consensus 258 ~~~~-~~~~~~v-~~~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~~~--~~~~-v~~~~~s~ 316 (337)
T 1gxr_A 258 KYQL-HLHESCV-LSLKFAYCGKWFVSTGKD-N------------LLNAWRTPYG---ASIFQSK--ESSS-VLSCDISV 316 (337)
T ss_dssp EEEE-CCCSSCE-EEEEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CSSC-EEEEEECT
T ss_pred eEEE-cCCccce-eEEEECCCCCEEEEecCC-C------------cEEEEECCCC---eEEEEec--CCCc-EEEEEECC
Confidence 1111 1111222 234567899999988754 2 5789998876 4321111 1111 11244678
Q ss_pred CCcEEEecCCC
Q 041651 410 DGRVLIGGSNP 420 (557)
Q Consensus 410 dG~V~v~GG~~ 420 (557)
||+.+++|+.+
T Consensus 317 ~~~~l~~~~~d 327 (337)
T 1gxr_A 317 DDKYIVTGSGD 327 (337)
T ss_dssp TSCEEEEEETT
T ss_pred CCCEEEEecCC
Confidence 99999988864
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.75 E-value=0.013 Score=59.38 Aligned_cols=255 Identities=14% Similarity=0.218 Sum_probs=127.7
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+.+.......+..+-.+.+..++|..+++||.+ ..+.+|+...............+. ....-.+++..
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 163 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFT 163 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEEC
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEeccccccccccceeeeccCCcEEEEEEe
Confidence 37899988776544333333333345667899999999974 578888875210011111100121 11222334455
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEee--CCcEEEEEcC--ceEEEeCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLP--DGNLFIFANT--RSILFDYKQ 251 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~--~G~ifv~gg~--~~~~yDp~t 251 (557)
++++.++.|+.+. ++.+| ... + +. ...+..... . --.+...+ +|+.++.|+. ...+||..+
T Consensus 164 ~~~~~l~t~s~D~-~v~lwd~~~--~----~~--~~~~~~h~~----~-v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 164 NSDMQILTASGDG-TCALWDVES--G----QL--LQSFHGHGA----D-VLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp SSSSEEEEEETTS-EEEEEETTT--C----CE--EEEEECCSS----C-EEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEeCCC-cEEEEeCCC--C----eE--EEEEcCCCC----C-eEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 6787777776653 55666 331 1 11 110111000 0 00122333 5788888874 467899998
Q ss_pred CeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcc
Q 041651 252 NKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSW 331 (557)
Q Consensus 252 ~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 331 (557)
.+....+ ... ...- ......| +++.+++|+.+. ++..+|+.... .-
T Consensus 230 ~~~~~~~---~~h--~~~v--~~v~~~p----------~~~~l~s~s~D~----------------~v~lwd~~~~~-~~ 275 (354)
T 2pbi_B 230 GQCVQAF---ETH--ESDV--NSVRYYP----------SGDAFASGSDDA----------------TCRLYDLRADR-EV 275 (354)
T ss_dssp CCEEEEE---CCC--SSCE--EEEEECT----------TSSEEEEEETTS----------------CEEEEETTTTE-EE
T ss_pred CcEEEEe---cCC--CCCe--EEEEEeC----------CCCEEEEEeCCC----------------eEEEEECCCCc-EE
Confidence 8765433 211 1100 1122222 677888887652 22233332210 00
Q ss_pred eeecCCCCc-eeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccC
Q 041651 332 VMEEMPLPR-VMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTD 410 (557)
Q Consensus 332 ~~~~M~~~R-~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpd 410 (557)
......... .-.....-|+|+++++|+.+ + ++.+||..+. +.-..+.. ...+. ....+.||
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~--~~~~~l~~-h~~~v--~~l~~spd 337 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYND-Y------------TINVWDVLKG--SRVSILFG-HENRV--STLRVSPD 337 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTC--SEEEEECC-CSSCE--EEEEECTT
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECC-C------------cEEEEECCCC--ceEEEEEC-CCCcE--EEEEECCC
Confidence 000100001 11123456899999998754 2 5789998665 12222221 11121 23456799
Q ss_pred CcEEEecCCCC
Q 041651 411 GRVLIGGSNPH 421 (557)
Q Consensus 411 G~V~v~GG~~~ 421 (557)
|+.+++|+.++
T Consensus 338 g~~l~sgs~D~ 348 (354)
T 2pbi_B 338 GTAFCSGSWDH 348 (354)
T ss_dssp SSCEEEEETTS
T ss_pred CCEEEEEcCCC
Confidence 99999998653
No 27
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.73 E-value=0.0045 Score=60.98 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=109.2
Q ss_pred eEEEEECCCCcEEECccCCC-cccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTD-TWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+.++|++|++-.---.... ..+....+++||++|+.+. +.+..|||. + .-.|+--.. .....+++..+
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~-----~~V~~~d~~-G-~~~W~~~~~---~~~~~~~~~~~ 85 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS-----KGAKMITRD-G-RELWNIAAP---AGCEMQTARIL 85 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECB-----SEEEEECTT-S-CEEEEEECC---TTCEEEEEEEC
T ss_pred EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCC-----CCEEEECCC-C-CEEEEEcCC---CCccccccEEC
Confidence 36788887877321111111 2345567789999999532 469999994 2 456764321 11123467788
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc--CceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN--TRSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg--~~~~~yDp~t~~ 253 (557)
+||++++....+...+-.+ |. + ...|. ...-..... .......+...++|++++... ....+||++ ++
T Consensus 86 ~dG~~lv~~~~~~~~v~~vd~~---G--k~l~~-~~~~~~~~~--~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 86 PDGNALVAWCGHPSTILEVNMK---G--EVLSK-TEFETGIER--PHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp TTSCEEEEEESTTEEEEEECTT---S--CEEEE-EEECCSCSS--GGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCEEEEecCCCCEEEEEeCC---C--CEEEE-EeccCCCCc--ccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 9999999865422223233 32 1 01232 111000000 001122345678999888764 457889998 44
Q ss_pred EEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCccee
Q 041651 254 VLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVM 333 (557)
Q Consensus 254 W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~ 333 (557)
...... .+. .+. + +..++ ++.+++++... ..+..+|+...+..|+.
T Consensus 157 ~~w~~~-~~~-----~~~-~-~~~~~----------~g~~~v~~~~~----------------~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 157 LLNSVK-LSG-----TPF-S-SAFLD----------NGDCLVACGDA----------------HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEEEEE-CSS-----CCC-E-EEECT----------TSCEEEECBTT----------------SEEEEECTTTCCEEEEE
T ss_pred EEEEEE-CCC-----Ccc-c-eeEcC----------CCCEEEEeCCC----------------CeEEEEeCcCCcEEEEe
Confidence 332232 111 111 2 33333 78888877543 12334444433456876
Q ss_pred e--cCCCCce--eeeEEEcCCCeEEEEc
Q 041651 334 E--EMPLPRV--MGDMILLPNGDVIIIN 357 (557)
Q Consensus 334 ~--~M~~~R~--~~~~v~lpdG~I~vvG 357 (557)
. ..+..|. ..++.+++||.|||..
T Consensus 203 ~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 203 NANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred cCCCCCCccccccccceEcCCCCEEEEe
Confidence 4 3332232 3445678999999987
No 28
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.71 E-value=0.0099 Score=61.22 Aligned_cols=133 Identities=13% Similarity=0.097 Sum_probs=72.0
Q ss_pred EEEEECCCCcEEECcc-----CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcce
Q 041651 99 SILYDVATNAYRPLMV-----QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYAT 172 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~-----~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s 172 (557)
+.+||+.+++...... .+.....+.+..++|+++++|+.. ..+.+||.. +.+.... +. ....-.+
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~---~~~~~~~---~~~~~~~~~~ 216 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK---TLAYKAT---VDLTGKWSKI 216 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT---TCCEEEE---EECSSSSEEE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC---CceEEEE---EcCCCCCeeE
Confidence 7899999888765322 122222234455689999998753 579999987 4332211 21 1222334
Q ss_pred EEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCcee-eecccccccccccCCccce-EEEeeCCcEEEEEcC-------
Q 041651 173 NQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYPF-VHLLPDGNLFIFANT------- 242 (557)
Q Consensus 173 ~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp~-~~~~~~G~ifv~gg~------- 242 (557)
++.-+||+.+++.+.....+.+| ... + +.. .++. ...+. +...++|+.+++++.
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~--~----~~~~~~~~----------~~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKT--K----LEIRKTDK----------IGLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTT--T----EEEEECCC----------CSEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCC--C----cEEEEecC----------CCCceEEEEcCCCCEEEEEECCCCcccc
Confidence 55566777654444434456666 331 1 111 1110 01122 334568876665542
Q ss_pred ---ceEEEeCCCCeEEE
Q 041651 243 ---RSILFDYKQNKVLK 256 (557)
Q Consensus 243 ---~~~~yDp~t~~W~~ 256 (557)
...+||..+.+...
T Consensus 281 ~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLID 297 (433)
T ss_dssp CCEEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCcEEe
Confidence 45689998887653
No 29
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.70 E-value=0.029 Score=55.65 Aligned_cols=248 Identities=10% Similarity=0.027 Sum_probs=119.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccccc--------
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERR-------- 168 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R-------- 168 (557)
.+.+||+.+++....-.. .....+.++.+||+ +|+.+.. ...+.+||+. +.+-...-. +....
T Consensus 70 ~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTV---NSAVTAIDAK---TGEVKGRLV-LDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETT---TTEEEEEETT---TCCEEEEEE-SCCCCCCSSCCCC
T ss_pred cEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecC---CCEEEEEeCC---CCeeEEEEe-cCCCccccccCCC
Confidence 588999998876443221 11233455667887 6666553 2579999998 443211101 11110
Q ss_pred CcceEEEecCCc-EEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccc-eEEEeeCCcEEEEEc--Cc
Q 041651 169 WYATNQILPDGR-IIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP-FVHLLPDGNLFIFAN--TR 243 (557)
Q Consensus 169 ~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp-~~~~~~~G~ifv~gg--~~ 243 (557)
.-.+++.-+||+ +|+.+......+.+| +.. + .....++.. ...| .....++|+.+++++ ..
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~--~---~~~~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~ 207 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGN--I---KLKTAIQNT---------GKMSTGLALDSEGKRLYTTNADGE 207 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTT--T---EEEEEECCC---------CTTCCCCEEETTTTEEEEECTTSE
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCC--C---ceEEEecCC---------CCccceEEECCCCCEEEEEcCCCe
Confidence 113355566776 555542333445556 431 1 011111100 0112 234567887555544 34
Q ss_pred eEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEE
Q 041651 244 SILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLV 323 (557)
Q Consensus 244 ~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d 323 (557)
..+||..+.+....++ .+...++.++ ...++-|- +..+|+..... +.+..+|
T Consensus 208 i~~~d~~~~~~~~~~~-~~~~~~~~~~--~~~~~s~d---------g~~l~~~~~~~----------------~~v~~~d 259 (353)
T 3vgz_A 208 LITIDTADNKILSRKK-LLDDGKEHFF--INISLDTA---------RQRAFITDSKA----------------AEVLVVD 259 (353)
T ss_dssp EEEEETTTTEEEEEEE-CCCSSSCCCE--EEEEEETT---------TTEEEEEESSS----------------SEEEEEE
T ss_pred EEEEECCCCeEEEEEE-cCCCCCCccc--ceEEECCC---------CCEEEEEeCCC----------------CEEEEEE
Confidence 6789999887654342 1111011111 11222220 34566654321 2344455
Q ss_pred ecCCCCcceee-cCCCCceeeeEEEcCCCe-EEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccc
Q 041651 324 VSHANPSWVME-EMPLPRVMGDMILLPNGD-VIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMY 401 (557)
Q Consensus 324 ~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~y 401 (557)
+.. .+.... +.+.++ +...-|||+ +|+.+..+ ..+.+||..+. +....-+. ...-
T Consensus 260 ~~~--~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~---~~~~~~~~--~~~~ 316 (353)
T 3vgz_A 260 TRN--GNILAKVAAPESL---AVLFNPARNEAYVTHRQA-------------GKVSVIDAKSY---KVVKTFDT--PTHP 316 (353)
T ss_dssp TTT--CCEEEEEECSSCC---CEEEETTTTEEEEEETTT-------------TEEEEEETTTT---EEEEEEEC--CSEE
T ss_pred CCC--CcEEEEEEcCCCc---eEEECCCCCEEEEEECCC-------------CeEEEEECCCC---eEEEEEec--CCCC
Confidence 432 122221 333332 244568988 67765422 15789999887 54332121 2222
Q ss_pred cccceeccCCc-EEEecCC
Q 041651 402 HSSAILLTDGR-VLIGGSN 419 (557)
Q Consensus 402 hs~a~llpdG~-V~v~GG~ 419 (557)
+ ...+.|||+ +|++...
T Consensus 317 ~-~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 317 N-SLALSADGKTLYVSVKQ 334 (353)
T ss_dssp E-EEEECTTSCEEEEEEEC
T ss_pred C-eEEEcCCCCEEEEEEcc
Confidence 2 344668998 7777654
No 30
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.69 E-value=0.0044 Score=62.10 Aligned_cols=147 Identities=7% Similarity=-0.021 Sum_probs=76.8
Q ss_pred eEEEEECCCCcEEECccCC-CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEE
Q 041651 98 HSILYDVATNAYRPLMVQT-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQI 175 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~ 175 (557)
.+..+|+++++++.+.... ...-...++-+||++|+++.. .+...+.+||.. +.++..+.. +. ....-..++.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~---~g~~~~~~~-~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID---GQTAHKLNT-VVAPGTPPAYVAV 93 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE---TTEEEEEEE-EEEESCCCSEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec---CCcEEEeee-eecCCCCCEEEEE
Confidence 4778889999987754321 111223455679997777532 123578899986 556554432 22 2222334566
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeeccccccccccc----CCccce-EEEeeCCcEEEEEc--CceEEE
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAE----NNLYPF-VHLLPDGNLFIFAN--TRSILF 247 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~----~~~yp~-~~~~~~G~ifv~gg--~~~~~y 247 (557)
-+||+.+++++.....+.+| ... .+ ....+..+... ...+ ....++ +...+||++|+... +...+|
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~-~g----~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAA-DG----ALTLTDTVQHS-GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECT-TS----CEEEEEEEECC-CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCC-CC----CeeecceeecC-CCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 77998555555444456666 321 11 11111100000 0000 011233 45668999777653 357789
Q ss_pred eCC-CCeEE
Q 041651 248 DYK-QNKVL 255 (557)
Q Consensus 248 Dp~-t~~W~ 255 (557)
|.. +++..
T Consensus 168 ~~~~~g~~~ 176 (347)
T 3hfq_A 168 NVSDAGQLS 176 (347)
T ss_dssp EECTTSCEE
T ss_pred EECCCCcEE
Confidence 987 45443
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.68 E-value=0.0075 Score=59.56 Aligned_cols=134 Identities=11% Similarity=0.148 Sum_probs=74.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+++-...-..+........+.++|+++++|+.+ ..+++||.. +.+-.. . +. ....-.+++.-
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~---~~~~~~--~-~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN---TGEKVV--D-FEAHPDYIRSIAVH 106 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEEC
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC---CCcEEE--E-EeCCCCcEEEEEEc
Confidence 37899998876433222233233345667899999999863 589999987 433211 1 22 22334456667
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEee-CCcEEEEEcCc--eEEEeCCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLP-DGNLFIFANTR--SILFDYKQN 252 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~-~G~ifv~gg~~--~~~yDp~t~ 252 (557)
++++.++.|+.+. ++.+| ... .+.....+.... ..--.+...| ++++++.|+.+ ..+||..+.
T Consensus 107 ~~~~~l~sgs~D~-~v~lWd~~~-------~~~~~~~~~~h~-----~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 107 PTKPYVLSGSDDL-TVKLWNWEN-------NWALEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp SSSSEEEEEETTS-CEEEEEGGG-------TTEEEEEECCCC-----SCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred CCCCEEEEECCCC-eEEEEECCC-------CcchhhhhcccC-----CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 7899988887664 45566 221 111111111100 0001122334 67888888754 678998654
Q ss_pred e
Q 041651 253 K 253 (557)
Q Consensus 253 ~ 253 (557)
+
T Consensus 174 ~ 174 (304)
T 2ynn_A 174 T 174 (304)
T ss_dssp S
T ss_pred C
Confidence 3
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.67 E-value=0.0072 Score=62.69 Aligned_cols=135 Identities=13% Similarity=0.166 Sum_probs=77.1
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEec
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILP 177 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 177 (557)
+.+||..+++....-..+.....+.++.++|+++++|+.+ ..+++||.. +.+-.. . +. ....-.+++..+
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~---~~~~~~--~-~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ---GFECIR--T-MHGHDHNVSSVSIMP 202 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT---SSCEEE--C-CCCCSSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC---CCceeE--E-EcCCCCCEEEEEEeC
Confidence 7899998876543322233333344566799999999874 568889987 433211 1 22 122234556667
Q ss_pred CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeE
Q 041651 178 DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKV 254 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W 254 (557)
+|+.++.|+.+. ++.+| ... + ..-..+. ... ...-.+...++|++++.|+. ...+||..+.+.
T Consensus 203 ~~~~l~s~s~D~-~i~~wd~~~--~---~~~~~~~---~h~-----~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRDK-TIKMWEVQT--G---YCVKTFT---GHR-----EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETTS-EEEEEETTT--C---CEEEEEE---CCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEeCCC-eEEEEECCC--C---cEEEEEe---CCC-----ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 899988888654 45566 321 1 0101110 100 01112334568999988875 467899988765
Q ss_pred EE
Q 041651 255 LK 256 (557)
Q Consensus 255 ~~ 256 (557)
..
T Consensus 269 ~~ 270 (410)
T 1vyh_C 269 KA 270 (410)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.63 E-value=0.024 Score=57.38 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=75.1
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcE-EEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTL-VQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i-~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+.+||..+++....-..+. ...+.++.+||+. ++.|+.. ..+++||.. +.+.... +.....-.+++.-
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~---~~~~~~~---~~~~~~v~~~~~s 82 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHS---NDVSIIDTA---TNNVIAT---VPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGG---TEEEEEETT---TTEEEEE---EECSSSEEEEEEC
T ss_pred EEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCC---CeEEEEECC---CCeEEEE---EECCCCccceEEC
Confidence 37788888877654322221 1233456678875 4665442 579999997 5443321 3333334456666
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccc-eEEEeeCCc-EEEEEc--CceEEEeCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP-FVHLLPDGN-LFIFAN--TRSILFDYKQ 251 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp-~~~~~~~G~-ifv~gg--~~~~~yDp~t 251 (557)
+||+.++++|.....+.+| ... .+.. ..+.. ...+ .+...++|+ ||+.+. ....+||..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~------~~~~--~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTS------NTVA--GTVKT-------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTT------TEEE--EEEEC-------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEECCCCEEEEEECCC------CeEE--EEEeC-------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 7888665566555566677 431 1111 11100 0012 234557887 556665 3577899999
Q ss_pred CeEEEEe
Q 041651 252 NKVLKEY 258 (557)
Q Consensus 252 ~~W~~~~ 258 (557)
.+....+
T Consensus 148 ~~~~~~~ 154 (391)
T 1l0q_A 148 KAVINTV 154 (391)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 8876433
No 34
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.62 E-value=0.007 Score=59.61 Aligned_cols=220 Identities=11% Similarity=0.021 Sum_probs=118.3
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCc
Q 041651 128 NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQ 206 (557)
Q Consensus 128 dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~ 206 (557)
.|+++++|.. ...+.++|++++ .-.|+.-.. .....+++..++||++|+.+ ...+..| |. + ...
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~tG-~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~~---G--~~~ 68 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKDTK-EIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITRD---G--REL 68 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETTTT-EEEEEEECC---TTCCCCEEEECTTSCEEEEC---BSEEEEECTT---S--CEE
T ss_pred CCcEEEeeCC---CCEEEEEECCCC-eEEEEeCCC---ccCCCcCeEECCCCCEEEeC---CCCEEEECCC---C--CEE
Confidence 4678888764 368999999743 345754221 11235677888999999943 2334455 42 1 123
Q ss_pred eeeecccccccccccCCccceEEEeeCCcEEEEEcC---ceEEEeCCCCeEEEEecCCCCCCCC--ccCCCCceEeecCc
Q 041651 207 TFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT---RSILFDYKQNKVLKEYPEIPGADPR--NYPSTGSSVLLPLD 281 (557)
Q Consensus 207 w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~---~~~~yDp~t~~W~~~~p~lp~~~~r--~~~~~g~~vllp~~ 281 (557)
|..... ... . ...+..++||++++.... ....+|+... ...... +...... ..+ .+.+. ++
T Consensus 69 W~~~~~-~~~------~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk-~l~~~~-~~~~~~~~~~~~-~~v~~-~~-- 134 (276)
T 3no2_A 69 WNIAAP-AGC------E-MQTARILPDGNALVAWCGHPSTILEVNMKGE-VLSKTE-FETGIERPHAQF-RQINK-NK-- 134 (276)
T ss_dssp EEEECC-TTC------E-EEEEEECTTSCEEEEEESTTEEEEEECTTSC-EEEEEE-ECCSCSSGGGSC-SCCEE-CT--
T ss_pred EEEcCC-CCc------c-ccccEECCCCCEEEEecCCCCEEEEEeCCCC-EEEEEe-ccCCCCcccccc-cCceE-CC--
Confidence 442110 000 0 012456789999887643 4566788543 222232 1111001 111 12222 22
Q ss_pred CCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEEcCCCeEEEEcCcCC
Q 041651 282 ERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQL 361 (557)
Q Consensus 282 ~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~ 361 (557)
+|.++++...+ ..+..+|+. .+..|+...-. +. +++..+++|+++|++...
T Consensus 135 --------~G~~lv~~~~~----------------~~v~~~d~~-G~~~w~~~~~~--~~-~~~~~~~~g~~~v~~~~~- 185 (276)
T 3no2_A 135 --------KGNYLVPLFAT----------------SEVREIAPN-GQLLNSVKLSG--TP-FSSAFLDNGDCLVACGDA- 185 (276)
T ss_dssp --------TSCEEEEETTT----------------TEEEEECTT-SCEEEEEECSS--CC-CEEEECTTSCEEEECBTT-
T ss_pred --------CCCEEEEecCC----------------CEEEEECCC-CCEEEEEECCC--Cc-cceeEcCCCCEEEEeCCC-
Confidence 67777765432 234455554 34568765211 11 235678899999987532
Q ss_pred CCCCcccCCCCccccEEEcCCCCCCCceEecCC-CCCcc-cccccceeccCCcEEEecC
Q 041651 362 GTAGWELARGPMTRPIIYRPSEQTSRRFSVMEP-STRPR-MYHSSAILLTDGRVLIGGS 418 (557)
Q Consensus 362 g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~-~~~~R-~yhs~a~llpdG~V~v~GG 418 (557)
..+..+||++.. ..|+.-.. ..-.| .+.+.+.+++||.+|++..
T Consensus 186 ------------~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 186 ------------HCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp ------------SEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred ------------CeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 157899998751 15765321 12123 2344567789999999973
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.55 E-value=0.02 Score=58.75 Aligned_cols=251 Identities=12% Similarity=0.096 Sum_probs=130.1
Q ss_pred eEEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+.+||..+++....... +.....+.+..++|+++++|+.+ ..+.+||.. +.+... . +............
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~---~~~~~~--~-~~~~~~~v~~~~~ 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE---SQTKLR--T-MAGHQARVGCLSW 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TCCEEE--E-ECCCSSCEEEEEE
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc---CCeEEE--E-ecCCCCceEEEEE
Confidence 478999998887655433 33333345566799999998863 479999987 443221 1 3222222333344
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~ 253 (557)
+++.++.|+.++ .+.+| .... .-.... +.... ..--.+...++|++++.|+. ...+||..+.+
T Consensus 185 -~~~~l~~~~~dg-~i~i~d~~~~------~~~~~~-~~~~~-----~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 185 -NRHVLSSGSRSG-AIHHHDVRIA------NHQIGT-LQGHS-----SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp -ETTEEEEEETTS-EEEEEETTSS------SCEEEE-EECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred -CCCEEEEEcCCC-CEEEEecccC------cceeeE-EcCCC-----CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 788888888664 44555 2210 100000 10100 00112344568999988875 47789998876
Q ss_pred EEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCccee
Q 041651 254 VLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVM 333 (557)
Q Consensus 254 W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~ 333 (557)
-...+. .. .... -.....|. +..++++||... ...+..+|+... +-..
T Consensus 251 ~~~~~~---~~--~~~v--~~~~~~p~---------~~~ll~~~~gs~--------------d~~i~i~d~~~~--~~~~ 298 (401)
T 4aez_A 251 PKFTKT---NH--NAAV--KAVAWCPW---------QSNLLATGGGTM--------------DKQIHFWNAATG--ARVN 298 (401)
T ss_dssp EEEEEC---CC--SSCC--CEEEECTT---------STTEEEEECCTT--------------TCEEEEEETTTC--CEEE
T ss_pred ccEEec---CC--cceE--EEEEECCC---------CCCEEEEecCCC--------------CCEEEEEECCCC--CEEE
Confidence 543332 11 1110 12222221 446777775211 122334444321 1111
Q ss_pred ecCCCCceeeeEEEcCCCeEEEEc-CcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCC--CCcccccccceeccC
Q 041651 334 EEMPLPRVMGDMILLPNGDVIIIN-GAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPS--TRPRMYHSSAILLTD 410 (557)
Q Consensus 334 ~~M~~~R~~~~~v~lpdG~I~vvG-G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~--~~~R~yhs~a~llpd 410 (557)
.+.....-.+....|+|+.+++. |...| .+.+||..+. +......+ ...+.. ...+.||
T Consensus 299 -~~~~~~~v~~~~~s~~~~~l~~~~g~~dg------------~i~v~~~~~~---~~~~~~~~~~h~~~v~--~~~~s~d 360 (401)
T 4aez_A 299 -TVDAGSQVTSLIWSPHSKEIMSTHGFPDN------------NLSIWSYSSS---GLTKQVDIPAHDTRVL--YSALSPD 360 (401)
T ss_dssp -EEECSSCEEEEEECSSSSEEEEEECTTTC------------EEEEEEEETT---EEEEEEEEECCSSCCC--EEEECTT
T ss_pred -EEeCCCcEEEEEECCCCCeEEEEeecCCC------------cEEEEecCCc---cceeEEEecCCCCCEE--EEEECCC
Confidence 11112222234556899988873 32212 5789998876 55543222 122222 2456789
Q ss_pred CcEEEecCCCC
Q 041651 411 GRVLIGGSNPH 421 (557)
Q Consensus 411 G~V~v~GG~~~ 421 (557)
|+.+++||.++
T Consensus 361 g~~l~s~~~dg 371 (401)
T 4aez_A 361 GRILSTAASDE 371 (401)
T ss_dssp SSEEEEECTTS
T ss_pred CCEEEEEeCCC
Confidence 99999998643
No 36
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.53 E-value=0.014 Score=58.74 Aligned_cols=139 Identities=11% Similarity=0.092 Sum_probs=80.7
Q ss_pred EEEEECCCCcEEECc---cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEE
Q 041651 99 SILYDVATNAYRPLM---VQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQ 174 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~---~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~ 174 (557)
+.+||..+++|.... ..+.....+.+.-+||+.+++|+.+ ..+.+||.. +.++..... +. ....-.+++
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~---~~~~~~~~~-~~~h~~~v~~v~ 112 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---ATTCIWKKN---QDDFECVTT-LEGHENEVKSVA 112 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT---SCEEEEEEC---CC-EEEEEE-ECCCSSCEEEEE
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC---CcEEEEEcc---CCCeEEEEE-ccCCCCCceEEE
Confidence 789999888875332 2233334445666899999999874 468888876 555433322 32 222334556
Q ss_pred EecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCC
Q 041651 175 ILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQ 251 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t 251 (557)
.-+||+.++.|+.+. ++.+| ... .........+..... .--.+...++|++++.|+. ...+||..+
T Consensus 113 ~sp~~~~l~s~s~D~-~v~iwd~~~-----~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 113 WAPSGNLLATCSRDK-SVWVWEVDE-----EDEYECVSVLNSHTQ-----DVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp ECTTSSEEEEEETTS-CEEEEEECT-----TSCEEEEEEECCCCS-----CEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred EeCCCCEEEEEECCC-eEEEEECCC-----CCCeEEEEEecCcCC-----CeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 667999999988765 44555 221 011211111111000 0112344578998888874 467899988
Q ss_pred CeEE
Q 041651 252 NKVL 255 (557)
Q Consensus 252 ~~W~ 255 (557)
++|.
T Consensus 182 ~~~~ 185 (345)
T 3fm0_A 182 DDWV 185 (345)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 8876
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.52 E-value=0.0094 Score=61.04 Aligned_cols=137 Identities=9% Similarity=0.145 Sum_probs=74.4
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccc-ccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHL-SERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m-~~~R~y~s~~~L 176 (557)
.+.+||..+.+.......+ ........-++|+.+++|+.+ ..+++||.. +.+-... + .....-.+++..
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~~~~---~~~h~~~v~~~~~~ 148 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN---FNLQREI---DQAHVSEITKLKFF 148 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT---SCEEEEE---TTSSSSCEEEEEEC
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC---Ccceeee---cccccCccEEEEEC
Confidence 3677887654332111111 112222345689999999863 579999987 4332221 2 123334456666
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~ 253 (557)
+||+.++.|+.++ .+.+| ... + ..-..+ ..... .--.+...++|+.++.|+. ...+||..+.+
T Consensus 149 ~~~~~l~s~s~d~-~i~iwd~~~--~---~~~~~~---~~h~~-----~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 149 PSGEALISSSQDM-QLKIWSVKD--G---SNPRTL---IGHRA-----TVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTSSEEEEEETTS-EEEEEETTT--C---CCCEEE---ECCSS-----CEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CCCCEEEEEeCCC-eEEEEeCCC--C---cCceEE---cCCCC-----cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 7899888887654 45566 321 1 011111 11000 0112344578998888874 47789999887
Q ss_pred EEEEe
Q 041651 254 VLKEY 258 (557)
Q Consensus 254 W~~~~ 258 (557)
-...+
T Consensus 215 ~~~~~ 219 (420)
T 3vl1_A 215 TIHTF 219 (420)
T ss_dssp EEEEE
T ss_pred eeEEe
Confidence 65434
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.52 E-value=0.02 Score=56.10 Aligned_cols=224 Identities=12% Similarity=0.171 Sum_probs=116.8
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccc---ccccCcceEEEecCCcEEEEcCcCCCceeEe-cC
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHL---SERRWYATNQILPDGRIIIIGGRRQFNYEFY-PK 197 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m---~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~ 197 (557)
+.+..++|+++++|+ . ..+++||.. +......-..+ .....-.+++..+||+.+++|+.++ .+.+| ..
T Consensus 56 ~~~~~~~~~~l~~~~-d---g~i~iw~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~ 127 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG-K---GCVKVWDIS---HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLA 127 (337)
T ss_dssp EEEECSSSSEEEEEC-B---SEEEEEETT---STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECC
T ss_pred EEEEecCCcEEEEcC-C---CeEEEEECC---CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECC
Confidence 345567999999998 2 579999987 33211110001 2233344566677899988887654 45566 33
Q ss_pred CCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCce
Q 041651 198 SDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSS 275 (557)
Q Consensus 198 ~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~ 275 (557)
. .+......+.... ..--.+...++|+.++.++. ...+||..+.+....+. .. .... ...
T Consensus 128 ~------~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~---~~--~~~i--~~~ 189 (337)
T 1gxr_A 128 A------PTPRIKAELTSSA-----PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---GH--TDGA--SCI 189 (337)
T ss_dssp C------C--EEEEEEECSS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CC--SSCE--EEE
T ss_pred C------CCcceeeecccCC-----CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee---cc--cCce--EEE
Confidence 1 1211111111100 00112344568888888864 47889999887654342 11 1100 111
Q ss_pred EeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEE
Q 041651 276 VLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVI 354 (557)
Q Consensus 276 vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~ 354 (557)
...| +++.+++|+.+. .+..+|+.. .+.. .......-.+....|+|+.+
T Consensus 190 ~~~~----------~~~~l~~~~~dg----------------~i~~~d~~~----~~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 190 DISN----------DGTKLWTGGLDN----------------TVRSWDLRE----GRQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp EECT----------TSSEEEEEETTS----------------EEEEEETTT----TEEEEEEECSSCEEEEEECTTSSEE
T ss_pred EECC----------CCCEEEEEecCC----------------cEEEEECCC----CceEeeecCCCceEEEEECCCCCEE
Confidence 2222 567777776542 223334332 1111 11111112234456899999
Q ss_pred EEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCC
Q 041651 355 IINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 355 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~ 420 (557)
++|+.+ + .+.+||..+. +-..+... ... -......|||+.+++|+.+
T Consensus 240 ~~~~~~-~------------~i~~~~~~~~---~~~~~~~~-~~~--v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 240 AVGMES-S------------NVEVLHVNKP---DKYQLHLH-ESC--VLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EEEETT-S------------CEEEEETTSS---CEEEECCC-SSC--EEEEEECTTSSEEEEEETT
T ss_pred EEEcCC-C------------cEEEEECCCC---CeEEEcCC-ccc--eeEEEECCCCCEEEEecCC
Confidence 998754 2 5789998876 43322211 111 1234567899999998864
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.51 E-value=0.051 Score=55.43 Aligned_cols=88 Identities=13% Similarity=0.108 Sum_probs=55.6
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+++-......+.....+.+..++|+++++|+.+ ..+++||.. +.+- .. .+. ....-.+++..
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~---~~~~--~~-~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK---DGSN--PR-TLIGHRATVTDIAII 190 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCC--CE-EEECCSSCEEEEEEE
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCcC--ce-EEcCCCCcEEEEEEc
Confidence 47899988877655433344444455667899999999863 579999987 3221 11 122 22233455667
Q ss_pred cCCcEEEEcCcCCCceeEe
Q 041651 177 PDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y 195 (557)
+||+.++.|+.++ .+.+|
T Consensus 191 ~~~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 191 DRGRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTTTEEEEEETTS-CEEEE
T ss_pred CCCCEEEEEcCCC-cEEEe
Confidence 7899999888764 34455
No 40
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.49 E-value=0.087 Score=53.34 Aligned_cols=244 Identities=11% Similarity=0.125 Sum_probs=113.4
Q ss_pred EEEEECCCCc--EEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc-ccccccCcceEEE
Q 041651 99 SILYDVATNA--YRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ-HLSERRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~-~m~~~R~y~s~~~ 175 (557)
+..+|++|++ |+.-. .... .+..++.+|+||+.... ..+..||+.++ ...|..-.. .....+...+.+.
T Consensus 115 l~a~d~~tG~~~W~~~~--~~~~-~~~p~~~~~~v~v~~~~----g~l~~~d~~tG-~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKV--AGEA-LSRPVVSDGLVLIHTSN----GQLQALNEADG-AVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEEEETTTCCEEEEEEC--SSCC-CSCCEEETTEEEEECTT----SEEEEEETTTC-CEEEEEECCC-----CCCCCCEE
T ss_pred EEEEECCCCCEEEEEeC--CCce-EcCCEEECCEEEEEcCC----CeEEEEECCCC-cEEEEEeCCCCceeecCCCCcEE
Confidence 7789998877 54321 1111 12233457777765432 46899999743 445875322 1111122233333
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeee-cccccccccc---cCCccceEEEeeCCcEEEEEc-CceEEEeC
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFML-HFLLETRDYA---ENNLYPFVHLLPDGNLFIFAN-TRSILFDY 249 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~-~~l~~t~d~~---~~~~yp~~~~~~~G~ifv~gg-~~~~~yDp 249 (557)
. +|.||+ |..+ ..+-.+ +. ++ ...|... .......... .....| +..+|.||+.+. ....++|+
T Consensus 187 ~-~~~v~~-g~~~-g~l~~~d~~--tG--~~~w~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 187 A-FGAAVV-GGDN-GRVSAVLME--QG--QMIWQQRISQATGSTEIDRLSDVDTTP---VVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp E-TTEEEE-CCTT-TEEEEEETT--TC--CEEEEEECCC-----------CCCCCC---EEETTEEEEECTTSCEEEEET
T ss_pred E-CCEEEE-EcCC-CEEEEEECC--CC--cEEEEEecccCCCCcccccccccCCCc---EEECCEEEEEecCcEEEEEEC
Confidence 3 777776 4322 223334 43 11 1234321 1000000000 000112 345788888763 45778999
Q ss_pred CCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCC
Q 041651 250 KQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANP 329 (557)
Q Consensus 250 ~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~ 329 (557)
++++-....+ .+ ... +.++- +++||+.... ..+.++|+.....
T Consensus 257 ~tG~~~w~~~-~~-----~~~--~~~~~------------~~~l~~~~~~-----------------g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 257 RSGQIMWKRE-LG-----SVN--DFIVD------------GNRIYLVDQN-----------------DRVMALTIDGGVT 299 (376)
T ss_dssp TTCCEEEEEC-CC-----CEE--EEEEE------------TTEEEEEETT-----------------CCEEEEETTTCCE
T ss_pred CCCcEEeecc-CC-----CCC--CceEE------------CCEEEEEcCC-----------------CeEEEEECCCCcE
Confidence 8875332221 11 110 11111 6788876432 1234455544445
Q ss_pred cceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceecc
Q 041651 330 SWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLT 409 (557)
Q Consensus 330 ~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llp 409 (557)
.|+...+.... ....++ .+|+||+... + | .+.+||+++.. ..|+.-.. ..... ...+..
T Consensus 300 ~w~~~~~~~~~-~~~~~~-~~~~l~v~~~-~-g------------~l~~~d~~tG~-~~~~~~~~--~~~~~--~~~~~~ 358 (376)
T 3q7m_A 300 LWTQSDLLHRL-LTSPVL-YNGNLVVGDS-E-G------------YLHWINVEDGR-FVAQQKVD--SSGFQ--TEPVAA 358 (376)
T ss_dssp EEEECTTTTSC-CCCCEE-ETTEEEEECT-T-S------------EEEEEETTTCC-EEEEEECC--TTCBC--SCCEEE
T ss_pred EEeecccCCCc-ccCCEE-ECCEEEEEeC-C-C------------eEEEEECCCCc-EEEEEecC--CCcce--eCCEEE
Confidence 68765333222 222333 4888887532 1 1 46899998861 14654221 11122 222335
Q ss_pred CCcEEEecC
Q 041651 410 DGRVLIGGS 418 (557)
Q Consensus 410 dG~V~v~GG 418 (557)
+|+||+...
T Consensus 359 ~~~l~v~~~ 367 (376)
T 3q7m_A 359 DGKLLIQAK 367 (376)
T ss_dssp TTEEEEEBT
T ss_pred CCEEEEEeC
Confidence 899988654
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.46 E-value=0.055 Score=55.16 Aligned_cols=262 Identities=16% Similarity=0.227 Sum_probs=123.2
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCC--CCceecCCcccccccC-cceEE
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDD--QCDWIELPQHLSERRW-YATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~--t~~W~~~~~~m~~~R~-y~s~~ 174 (557)
.+.+||..+.+-...-..+.......++.+||+.+++||.+ ..+.+||..+.. ..... ....+..... -.++.
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~~~~~~~~~~~-~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLSSQADRDGNMP-VSRVLTGHKGYASSCQ 164 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECCCCSSCCCSST-TCCBCCCCSSCCCCCB
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECCCCccccCCcc-ceeeccCCCcceEEEE
Confidence 37899998876544333343344455677899999999974 467888875210 01110 0000111111 11222
Q ss_pred EecC-CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEE---eeCCcEEEEEcC--ceEEE
Q 041651 175 ILPD-GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHL---LPDGNLFIFANT--RSILF 247 (557)
Q Consensus 175 ~L~d-G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~---~~~G~ifv~gg~--~~~~y 247 (557)
..++ +..++.|+.+. ++.+| ... + ..-..+.. .. ......+...+ -.++++++.|+. ...+|
T Consensus 165 ~~~~~~~~l~s~s~D~-~i~~wd~~~--~---~~~~~~~~--~~---~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~w 233 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQ-TCVLWDVTT--G---QRISIFGS--EF---PSGHTADVLSLSINSLNANMFISGSCDTTVRLW 233 (380)
T ss_dssp CCSSSSSCEEEECTTS-CEEEECTTT--C---CEEEEECC--CS---SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEE
T ss_pred EecCCCCEEEEECCCC-cEEEEEcCC--C---cEEEEeec--cc---CCCCccCeEEEEeecCCCCEEEEEECCCeEEEE
Confidence 2333 44566666543 45566 321 1 01111100 00 00000111111 237889998875 46789
Q ss_pred eCCCC-eEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceE-EEEec
Q 041651 248 DYKQN-KVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCG-RLVVS 325 (557)
Q Consensus 248 Dp~t~-~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~-~~d~~ 325 (557)
|.+.. +-.+.+ .+. ... .-.....| +++.++.|+.+.. ..+|+.....+. .+...
T Consensus 234 d~~~~~~~~~~~---~~h--~~~--v~~v~~~p----------~~~~l~s~s~D~~------i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 234 DLRITSRAVRTY---HGH--EGD--INSVKFFP----------DGQRFGTGSDDGT------CRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp ETTTTCCCCEEE---CCC--SSC--CCEEEECT----------TSSEEEEECSSSC------EEEEETTTTEEEEEECCC
T ss_pred ECCCCCcceEEE---CCc--CCC--eEEEEEec----------CCCeEEEEcCCCe------EEEEECCCCcEEEEeccc
Confidence 98643 211112 211 110 01222323 6788888886521 123333222111 01100
Q ss_pred CCCCcceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCce-EecCCC---CCcccc
Q 041651 326 HANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRF-SVMEPS---TRPRMY 401 (557)
Q Consensus 326 ~~~~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-~~~~~~---~~~R~y 401 (557)
. .......+-. .+...-|+|+++++|+.+ | .+.+||..+. +- ..+..+ ...+.
T Consensus 291 ~-----~~~~~~~~~v-~~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~h~~~v- 347 (380)
T 3iz6_a 291 P-----DRNDNELPIV-TSVAFSISGRLLFAGYSN-G------------DCYVWDTLLA---EMVLNLGTLQNSHEGRI- 347 (380)
T ss_dssp C-----SSSCCSSCSC-SEEEECSSSSEEEEECTT-S------------CEEEEETTTC---CEEEEECCSCSSCCCCC-
T ss_pred c-----cccccccCce-EEEEECCCCCEEEEEECC-C------------CEEEEECCCC---ceEEEEecccCCCCCce-
Confidence 0 0000000111 233456899999998754 2 5789998776 43 223222 11222
Q ss_pred cccceeccCCcEEEecCCCC
Q 041651 402 HSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 402 hs~a~llpdG~V~v~GG~~~ 421 (557)
.+..+-|||+.+++||.++
T Consensus 348 -~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 348 -SCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp -CEEEECSSSSEEEEECTTS
T ss_pred -EEEEECCCCCEEEEeeCCC
Confidence 2345679999999999754
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.021 Score=57.14 Aligned_cols=143 Identities=12% Similarity=0.080 Sum_probs=74.7
Q ss_pred EEEEECCCCcEEECccC----CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCC--CCceecCCcccc-cccCcc
Q 041651 99 SILYDVATNAYRPLMVQ----TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDD--QCDWIELPQHLS-ERRWYA 171 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~--t~~W~~~~~~m~-~~R~y~ 171 (557)
+.+||..++.++.+... +.....+.+.-++|+++++|+.+ ..+++||..... ..++..... +. +...-.
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~ 111 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAI-IEGHENEVK 111 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEE-EC----CEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEE-EcCCCCcEE
Confidence 77889887655433221 32223344566799999999873 578999875110 112222211 22 122233
Q ss_pred eEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEe
Q 041651 172 TNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFD 248 (557)
Q Consensus 172 s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yD 248 (557)
+++.-+||+.++.|+.+. ++.+| ... . ...+.....+..... .--.+...++|++++.|+. ...+||
T Consensus 112 ~v~~sp~g~~las~s~D~-~v~iwd~~~-~---~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~i~iW~ 181 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDK-SVWIWETDE-S---GEEYECISVLQEHSQ-----DVKHVIWHPSEALLASSSYDDTVRIWK 181 (330)
T ss_dssp EEEECTTSCEEEEEETTS-CEEEEECCT-T---CCCCEEEEEECCCSS-----CEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeccC-C---CCCeEEEEEeccCCC-----ceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 455567899999888764 45566 311 0 012221111111100 0012233578999988875 467898
Q ss_pred CCCCeEE
Q 041651 249 YKQNKVL 255 (557)
Q Consensus 249 p~t~~W~ 255 (557)
..++.|.
T Consensus 182 ~~~~~~~ 188 (330)
T 2hes_X 182 DYDDDWE 188 (330)
T ss_dssp EETTEEE
T ss_pred CCCCCee
Confidence 8877664
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.41 E-value=0.035 Score=54.73 Aligned_cols=129 Identities=10% Similarity=0.124 Sum_probs=69.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCce-ecCCcccccccCcce-EE
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDW-IELPQHLSERRWYAT-NQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W-~~~~~~m~~~R~y~s-~~ 174 (557)
.+.+||+.+++............ +.++-+||+ +|+.+.. ...+.+||+. +.+. ... +........ ++
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~---~~~~~~~~---~~~~~~~~~~~~ 90 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ---LEPPKVVA---IQEGQSSMADVD 90 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS---SSSCEEEE---EEECSSCCCCEE
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC---CCceeEEe---cccCCCCccceE
Confidence 47899999988865433222222 456667887 5555542 2589999998 4443 111 222222222 56
Q ss_pred EecCCcEEEEcCcCCC--ceeEe-cCCCCCCCCCcee-eecccccccccccCCccc-eEEEeeCCc-EEEEEc--Cc-eE
Q 041651 175 ILPDGRIIIIGGRRQF--NYEFY-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYP-FVHLLPDGN-LFIFAN--TR-SI 245 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~--~~E~y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp-~~~~~~~G~-ifv~gg--~~-~~ 245 (557)
.-+||+.++++..... .+.+| ... .+.. .++. ...| .+...+||+ +|+... .. ..
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~------~~~~~~~~~----------~~~~~~~~~spdg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLK------NKFISTIPI----------PYDAVGIAISPNGNGLILIDRSSANTVR 154 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTT------TEEEEEEEC----------CTTEEEEEECTTSSCEEEEEETTTTEEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCC------CCeEEEEEC----------CCCccceEECCCCCEEEEEecCCCceEE
Confidence 6678886665544333 56677 331 1211 1111 1112 345567997 777653 34 66
Q ss_pred EEeCCCC
Q 041651 246 LFDYKQN 252 (557)
Q Consensus 246 ~yDp~t~ 252 (557)
+||...+
T Consensus 155 ~~~~~~~ 161 (331)
T 3u4y_A 155 RFKIDAD 161 (331)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 7776543
No 44
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.39 E-value=0.077 Score=55.00 Aligned_cols=243 Identities=13% Similarity=0.105 Sum_probs=120.8
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||..+++-...-..+..... ++..++..+++|+.+ ..+.+||.. +.+-.. . +............
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~--~-~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRD---ATLRVWDIE---TGQCLH--V-LMGHVAAVRCVQY- 247 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEE--EEEEETTEEEEEETT---SEEEEEESS---SCCEEE--E-EECCSSCEEEEEE-
T ss_pred eEEEEECCcCcEEEEECCCCCcEE--EEEecCCEEEEEeCC---CEEEEEECC---CCcEEE--E-EcCCcccEEEEEE-
Confidence 477889888764432222221111 122367778888763 579999987 333211 1 2222222223334
Q ss_pred CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeE
Q 041651 178 DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKV 254 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W 254 (557)
+|+.+++|+.++ .+.+| ... + . ....+.. ..-+...+..+|+.++.|+. ...+||..+.+-
T Consensus 248 ~~~~l~~~~~dg-~i~iwd~~~--~----~--~~~~~~~-------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 248 DGRRVVSGAYDF-MVKVWDPET--E----T--CLHTLQG-------HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp CSSCEEEEETTS-CEEEEEGGG--T----E--EEEEECC-------CSSCEEEEEECSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEcCCC-EEEEEECCC--C----c--EeEEecC-------CCCceEEEEECCCEEEEEeCCCeEEEEECCCCCE
Confidence 888888888664 34555 331 0 1 1111111 11123344458888888864 467899988875
Q ss_pred EEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee
Q 041651 255 LKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME 334 (557)
Q Consensus 255 ~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~ 334 (557)
...+ ... .. ....+.+ +++.+++|+.+. .+..+|+.......+.
T Consensus 312 ~~~~---~~~--~~----~v~~~~~----------~~~~l~~~~~dg----------------~i~vwd~~~~~~~~~~- 355 (445)
T 2ovr_B 312 IHTL---TGH--QS----LTSGMEL----------KDNILVSGNADS----------------TVKIWDIKTGQCLQTL- 355 (445)
T ss_dssp EEEE---CCC--CS----CEEEEEE----------ETTEEEEEETTS----------------CEEEEETTTCCEEEEE-
T ss_pred EEEE---cCC--cc----cEEEEEE----------eCCEEEEEeCCC----------------eEEEEECCCCcEEEEE-
Confidence 5433 211 11 1222211 566778877542 2233343321111111
Q ss_pred cCCC-CceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCC--CcccccccceeccC
Q 041651 335 EMPL-PRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPST--RPRMYHSSAILLTD 410 (557)
Q Consensus 335 ~M~~-~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~--~~R~yhs~a~llpd 410 (557)
..+. ......++. .+++.+++|+.+ | .+.+||..+. +.. .+.... .....-.....-||
T Consensus 356 ~~~~~~~~~v~~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~ 418 (445)
T 2ovr_B 356 QGPNKHQSAVTCLQ-FNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNT 418 (445)
T ss_dssp CSTTSCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred ccCCCCCCCEEEEE-ECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCC
Confidence 1111 111122233 378999988754 2 5789999887 543 221110 00111112345689
Q ss_pred CcEEEecCCCC
Q 041651 411 GRVLIGGSNPH 421 (557)
Q Consensus 411 G~V~v~GG~~~ 421 (557)
|.++++|+.+.
T Consensus 419 ~~~la~~~~dg 429 (445)
T 2ovr_B 419 KLVCAVGSRNG 429 (445)
T ss_dssp EEEEEEECSSS
T ss_pred EEEEEEcccCC
Confidence 99999998754
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.37 E-value=0.024 Score=58.95 Aligned_cols=90 Identities=9% Similarity=0.102 Sum_probs=53.5
Q ss_pred EEEEECCCCcEEECcc--CCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 99 SILYDVATNAYRPLMV--QTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
+.+||..+++...+.. .+.....+.++.+ |+.++++|+.+ ..+++||.. +.........-....+..+++.
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~ 217 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK---GNILRVFASSDTINIWFCSLDV 217 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT---SCEEEEEECCSSCSCCCCCEEE
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc---CCceeEEeccCCCCccEEEEEE
Confidence 7899988766433322 2222223334444 78899998863 579999987 4443322110112334455666
Q ss_pred ecCCcEEEEcCcCCCceeEe
Q 041651 176 LPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y 195 (557)
-+||+++++|+.++ .+.+|
T Consensus 218 ~~~~~~l~~g~~dg-~i~~w 236 (435)
T 4e54_B 218 SASSRMVVTGDNVG-NVILL 236 (435)
T ss_dssp ETTTTEEEEECSSS-BEEEE
T ss_pred CCCCCEEEEEeCCC-cEeee
Confidence 78999999998764 34555
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.32 E-value=0.046 Score=55.20 Aligned_cols=133 Identities=10% Similarity=0.081 Sum_probs=75.2
Q ss_pred EEEEECCCCcEEECcc--CCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 99 SILYDVATNAYRPLMV--QTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
+.+||..+++...... .+.....+....+ ++.++++|+.+ ..+++||.. +.........-....+-.+++.
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~~~~~~~~~~~~v~~~~~ 171 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS---GSVIQVFAKTDSWDYWYCCVDV 171 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT---SCEEEEEECCCCSSCCEEEEEE
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC---CCceEEEeccCCCCCCeEEEEE
Confidence 7899998887765433 2333333445566 67888888763 579999987 4444332210111233445666
Q ss_pred ecCCcEEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCc-EEEEEcCc--eEEEeCCC
Q 041651 176 LPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN-LFIFANTR--SILFDYKQ 251 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~-ifv~gg~~--~~~yDp~t 251 (557)
.++|+.+++|+.++ .+.+|... + .....+. ... ..--.+...++|+ +++.|+.+ ..+||..+
T Consensus 172 ~~~~~~l~~~~~d~-~i~i~d~~--~---~~~~~~~---~h~-----~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 172 SVSRQMLATGDSTG-RLLLLGLD--G---HEIFKEK---LHK-----AKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ETTTTEEEEEETTS-EEEEEETT--S---CEEEEEE---CSS-----SCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCCEEEEECCCC-CEEEEECC--C---CEEEEec---cCC-----CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 77999999988764 45555221 0 0111111 000 0011234457888 88888754 67899876
No 47
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.32 E-value=0.1 Score=49.62 Aligned_cols=48 Identities=13% Similarity=-0.038 Sum_probs=27.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
+..||+.+...............+.++..+|++|+... ...+.+||+.
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~i~~~d~~ 95 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF----NNRVVTLAAG 95 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET----TTEEEEECTT
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC----CCEEEEEeCC
Confidence 66788877665544322212233455667899998865 2478999987
No 48
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.31 E-value=0.11 Score=51.78 Aligned_cols=136 Identities=15% Similarity=0.166 Sum_probs=79.0
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+++-...-..........++.+||+.+++|+.. ..+.+||.. +.+-.. . +. ......+++.-
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~---~~~~~~--~-~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE---SGKKEY--S-LDTRGKFILSIAYS 173 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT---TCSEEE--E-EECSSSCEEEEEEC
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC---CCceeE--E-ecCCCceEEEEEEC
Confidence 47899998876533222222223335667899999999863 578999987 332111 1 21 22333456667
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~ 253 (557)
+||+.++.|+.++ .+.+| ... + +. ...+.... .. --.+...++|++++.|+.+ ..+||..+.+
T Consensus 174 pdg~~lasg~~dg-~i~iwd~~~--~----~~--~~~~~~h~----~~-v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 174 PDGKYLASGAIDG-IINIFDIAT--G----KL--LHTLEGHA----MP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp TTSSEEEEEETTS-CEEEEETTT--T----EE--EEEECCCS----SC-CCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred CCCCEEEEEcCCC-eEEEEECCC--C----cE--EEEEcccC----Cc-eeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 8999999988764 45666 331 1 11 11111100 00 1133456799999998754 6789998877
Q ss_pred EEE
Q 041651 254 VLK 256 (557)
Q Consensus 254 W~~ 256 (557)
...
T Consensus 240 ~~~ 242 (321)
T 3ow8_A 240 LAG 242 (321)
T ss_dssp EEE
T ss_pred eeE
Confidence 554
No 49
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.29 E-value=0.025 Score=58.00 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=34.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
+.+||..+++....-..+.....+.+..++|+.+++|+.+ ..+++||..
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~ 195 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR 195 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC
Confidence 7899998877654333333333345566899999998863 579999987
No 50
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.23 E-value=0.089 Score=52.58 Aligned_cols=225 Identities=14% Similarity=0.197 Sum_probs=115.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCC
Q 041651 124 SVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDED 201 (557)
Q Consensus 124 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~ 201 (557)
..-+||+++++|+.+ ..+++||.. +.+-... +. ...+-.+++.-++|+.++.||.++ .+.+| ....+
T Consensus 62 ~~s~d~~~l~s~s~D---g~v~iWd~~---~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~~~- 130 (340)
T 1got_B 62 HWGTDSRLLLSASQD---GKLIIWDSY---TTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKTRE- 130 (340)
T ss_dssp EECTTSSEEEEEETT---TEEEEEETT---TCCEEEE---EECSSSCEEEEEECTTSSEEEEEETTC-EEEEEETTTCS-
T ss_pred EECCCCCEEEEEeCC---CcEEEEECC---CCCcceE---eecCCccEEEEEECCCCCEEEEEeCCC-eEEEEECccCC-
Confidence 445789999999873 579999987 3332111 21 223344566677999999998764 45566 32100
Q ss_pred CCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc-CceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecC
Q 041651 202 LSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN-TRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPL 280 (557)
Q Consensus 202 ~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg-~~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~ 280 (557)
........+.... ..--.+...++++++..+. ....+||..+.+....+ ... ...- -.....|
T Consensus 131 ---~~~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h--~~~v--~~~~~~~- 194 (340)
T 1got_B 131 ---GNVRVSRELAGHT-----GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TGH--TGDV--MSLSLAP- 194 (340)
T ss_dssp ---BSCEEEEEEECCS-----SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CCC--SSCE--EEEEECT-
T ss_pred ---CcceeEEEecCCC-----ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cCC--CCce--EEEEECC-
Confidence 0111111111100 0001122345777554443 34778999988765433 221 1100 0112222
Q ss_pred cCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCc
Q 041651 281 DERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGA 359 (557)
Q Consensus 281 ~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~ 359 (557)
+++++++|+.+. ++..+|+... .-... .-...... +....|+|+.+++|+.
T Consensus 195 ---------~~~~l~sg~~d~----------------~v~~wd~~~~--~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 195 ---------DTRLFVSGACDA----------------SAKLWDVREG--MCRQTFTGHESDIN-AICFFPNGNAFATGSD 246 (340)
T ss_dssp ---------TSSEEEEEETTS----------------CEEEEETTTC--SEEEEECCCSSCEE-EEEECTTSSEEEEEET
T ss_pred ---------CCCEEEEEeCCC----------------cEEEEECCCC--eeEEEEcCCcCCEE-EEEEcCCCCEEEEEcC
Confidence 678888888652 2223333211 10011 11122222 3345689999999876
Q ss_pred CCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccCCcEEEecCCC
Q 041651 360 QLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpdG~V~v~GG~~ 420 (557)
+ | ++.+||..+. +-. ..... .....-......|||+++++|+.+
T Consensus 247 d-~------------~v~iwd~~~~---~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 247 D-A------------TCRLFDLRAD---QELMTYSHD-NIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp T-S------------CEEEEETTTT---EEEEEECCT-TCCSCEEEEEECTTSSEEEEEETT
T ss_pred C-C------------cEEEEECCCC---cEEEEEccC-CcccceEEEEECCCCCEEEEECCC
Confidence 5 2 5789998876 422 11111 001111234567999999999864
No 51
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.23 E-value=0.1 Score=52.70 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=73.9
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||+.+++....-.... ...+.++.+||+.++++|..+ ..+.+||.. +.+.... +.....-.+++..+
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~---~~~~~~~---~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS--STLSVIDTT---SNTVAGT---VKTGKSPLGLALSP 125 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT--TEEEEEETT---TTEEEEE---EECSSSEEEEEECT
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCC--CEEEEEECC---CCeEEEE---EeCCCCcceEEECC
Confidence 37889999887654332222 233455667888665555322 579999998 5543221 22333334556667
Q ss_pred CCcEE-EEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccc-eEEEeeCCc-EEEEEcC--ceEEEeCCC
Q 041651 178 DGRII-IIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP-FVHLLPDGN-LFIFANT--RSILFDYKQ 251 (557)
Q Consensus 178 dG~vy-vvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp-~~~~~~~G~-ifv~gg~--~~~~yDp~t 251 (557)
||+.+ +.++. ...+.+| ... .+.. ..+.. ...+ .+...++|+ ||+.+.. ...+||..+
T Consensus 126 dg~~l~~~~~~-~~~v~~~d~~~------~~~~--~~~~~-------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 126 DGKKLYVTNNG-DKTVSVINTVT------KAVI--NTVSV-------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp TSSEEEEEETT-TTEEEEEETTT------TEEE--EEEEC-------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEeCC-CCEEEEEECCC------CcEE--EEEec-------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 88754 55543 3455666 331 1111 11100 0112 234456886 5566543 478899999
Q ss_pred CeEEEEe
Q 041651 252 NKVLKEY 258 (557)
Q Consensus 252 ~~W~~~~ 258 (557)
++....+
T Consensus 190 ~~~~~~~ 196 (391)
T 1l0q_A 190 NSVIDTV 196 (391)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 8766433
No 52
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.21 E-value=0.17 Score=48.60 Aligned_cols=131 Identities=11% Similarity=-0.002 Sum_probs=70.5
Q ss_pred EEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
+..||+. +++...... ......+.++..+|++|+.... ...+.+||+. . ++.... ++ ....-.+++.-
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~---g-~~~~~~--~~~~~~~~~~i~~~ 107 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK---G-IIKEYT--LPNPDSAPYGITEG 107 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT---S-CEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC---C-cEEEEe--CCCcCCCceeeEEC
Confidence 6788888 777665422 2222334455578999998643 2468899986 2 333321 21 12223345555
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceE-EEeeCCcEEEEEc--CceEEEeCCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFV-HLLPDGNLFIFAN--TRSILFDYKQN 252 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~~G~ifv~gg--~~~~~yDp~t~ 252 (557)
++|++|+..... ..+..+ +. .+....... . ....|.. ...++|++|+... ....+||+ ++
T Consensus 108 ~~g~l~v~~~~~-~~i~~~d~~-------g~~~~~~~~-~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 171 (299)
T 2z2n_A 108 PNGDIWFTEMNG-NRIGRITDD-------GKIREYELP-N------KGSYPSFITLGSDNALWFTENQNNAIGRITE-SG 171 (299)
T ss_dssp TTSCEEEEETTT-TEEEEECTT-------CCEEEEECS-S------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred CCCCEEEEecCC-ceEEEECCC-------CCEEEecCC-C------CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC
Confidence 689999875432 233444 32 011111100 0 0112333 3445899998763 45778999 66
Q ss_pred eEE
Q 041651 253 KVL 255 (557)
Q Consensus 253 ~W~ 255 (557)
+..
T Consensus 172 ~~~ 174 (299)
T 2z2n_A 172 DIT 174 (299)
T ss_dssp CEE
T ss_pred cEE
Confidence 665
No 53
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.21 E-value=0.12 Score=50.86 Aligned_cols=186 Identities=10% Similarity=0.085 Sum_probs=96.6
Q ss_pred CCCCCCCCCCCCceEEccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCC
Q 041651 27 SQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVAT 106 (557)
Q Consensus 27 ~~~~~~~~~~~g~W~~~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t 106 (557)
...+..+|...++....... +......++-++|+.+++.... + ..+.+||+.+
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~---------~-----------------~~i~~~d~~~ 71 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITL-GYDFVDTAITSDCSNVVVTSDF---------C-----------------QTLVQIETQL 71 (331)
T ss_dssp GTEEEEEETTTCCEEEEEEC-CCCEEEEEECSSSCEEEEEEST---------T-----------------CEEEEEECSS
T ss_pred CCeEEEEeCcccceeeeEEc-cCCcceEEEcCCCCEEEEEeCC---------C-----------------CeEEEEECCC
Confidence 34566677777877654332 2222255555788744443321 1 1378899998
Q ss_pred CcE-EECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCc-EEEE
Q 041651 107 NAY-RPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGR-IIII 184 (557)
Q Consensus 107 ~~w-~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-vyvv 184 (557)
++. .........-+.+.++.+||+.++++....+...+.+||.. +.+.... +.......+++.-+||+ +|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~---~~~~~~~---~~~~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 72 EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL---KNKFIST---IPIPYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT---TTEEEEE---EECCTTEEEEEECTTSSCEEEE
T ss_pred CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC---CCCeEEE---EECCCCccceEECCCCCEEEEE
Confidence 875 22222222223335667899876654432222389999998 5544321 22333235667778887 6666
Q ss_pred cCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccce-EEEeeCCc-EEEEEc--CceEEEeCCCCeE
Q 041651 185 GGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPF-VHLLPDGN-LFIFAN--TRSILFDYKQNKV 254 (557)
Q Consensus 185 GG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~-~~~~~~G~-ifv~gg--~~~~~yDp~t~~W 254 (557)
+..+...+.+|.....+ ...... ... ......|. +...+||+ +|+.+. ....+||.++.+.
T Consensus 146 ~~~~~~~i~~~~~~~~g----~~~~~~-~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADG----VLFDTG-QEF----ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EETTTTEEEEEEECTTC----CEEEEE-EEE----ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ecCCCceEEEEEECCCC----cEeecC-Ccc----ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 54333225555211011 111110 000 00111233 34567998 777663 4578899988775
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.015 Score=58.03 Aligned_cols=89 Identities=11% Similarity=0.165 Sum_probs=52.4
Q ss_pred EEEEECCCCcEEECccC--CCcccccCeecCC--CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceE
Q 041651 99 SILYDVATNAYRPLMVQ--TDTWCSSGSVLPN--GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATN 173 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~d--G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~ 173 (557)
+.+||...+++..+... +.....+....++ ++++++|+.+ ..+.+||.. +.+|..... +. ....-.++
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~---~~~~~~~~~-~~~~~~~v~~~ 107 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE---NGRWSQIAV-HAVHSASVNSV 107 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEE---TTEEEEEEE-ECCCSSCEEEE
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcC---CCceeEeee-ecCCCcceEEE
Confidence 77888876666655432 2222222334445 8999999873 478999988 666655432 32 22233444
Q ss_pred EEecC--CcEEEEcCcCCCceeEe
Q 041651 174 QILPD--GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 174 ~~L~d--G~vyvvGG~~~~~~E~y 195 (557)
+..++ |+.+++|+.++ .+.+|
T Consensus 108 ~~~~~~~~~~l~~~~~d~-~i~v~ 130 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDG-KVSVV 130 (379)
T ss_dssp EECCGGGCSEEEEEETTS-EEEEE
T ss_pred EeCCCCCCCEEEEecCCC-cEEEE
Confidence 55556 77888877654 33444
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.19 E-value=0.081 Score=56.53 Aligned_cols=241 Identities=12% Similarity=0.141 Sum_probs=124.4
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+.....+... .....+.++.+||+.+++|+.. ..+++||.. ...-.. +. ....-.+++.-
T Consensus 326 ~i~~w~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~---~~~~~~----~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGH-SSSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQLLQT----LTGHSSSVRGVAFS 394 (577)
T ss_dssp CEEEEETTSCEEEEECCC-SSCEEEEEECTTSSEEEEEETT---SEEEEEETT---CCEEEE----EECCSSCEEEEEEC
T ss_pred eEEEEeCCCCeeEEEeCC-CCCEEEEEECCCCCEEEEEeCC---CEEEEEcCC---CCEEEE----ecCCCCCeEEEEEC
Confidence 367888877665554322 2223345667899999998763 578899865 322221 21 11222345566
Q ss_pred cCCcEEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCeE
Q 041651 177 PDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNKV 254 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~W 254 (557)
+||+.++.|+.+. .+.+|... + +. +..+.... ..-..+...+|++.++.++.+ ..+||......
T Consensus 395 ~dg~~l~~~~~d~-~v~~~~~~--~----~~--~~~~~~~~-----~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 395 PDGQTIASASDDK-TVKLWNRN--G----QL--LQTLTGHS-----SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLL 460 (577)
T ss_dssp TTSSCEEEEETTS-EEEEECTT--C----CE--EEEEECCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCC-EEEEEeCC--C----CE--EEEecCCC-----CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEE
Confidence 7999999887653 45556321 0 11 11011100 001123456799988888653 67888655433
Q ss_pred EEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee
Q 041651 255 LKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME 334 (557)
Q Consensus 255 ~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~ 334 (557)
. .+. .. .... -.....| +++++++|+.+. .+..+|... +-...
T Consensus 461 ~-~~~---~~--~~~v--~~~~~sp----------d~~~las~~~d~----------------~i~iw~~~~---~~~~~ 503 (577)
T 2ymu_A 461 Q-TLT---GH--SSSV--RGVAFSP----------DGQTIASASDDK----------------TVKLWNRNG---QLLQT 503 (577)
T ss_dssp E-EEE---CC--SSCE--EEEEECT----------TSCEEEEEETTS----------------EEEEEETTS---CEEEE
T ss_pred E-EEc---CC--CCCE--EEEEEcC----------CCCEEEEEeCCC----------------EEEEEcCCC---CEEEE
Confidence 2 232 11 1100 0112222 788888887652 112222110 11111
Q ss_pred -cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcE
Q 041651 335 -EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRV 413 (557)
Q Consensus 335 -~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V 413 (557)
.-...... +....|||+.+++|+.+ + .+.+||.... ....+... .... ......|||+.
T Consensus 504 ~~~h~~~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h-~~~v--~~~~fs~dg~~ 563 (577)
T 2ymu_A 504 LTGHSSSVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQT 563 (577)
T ss_dssp EECCSSCEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSC
T ss_pred EeCCCCCEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCC-CCCE--EEEEEcCCCCE
Confidence 11222232 23456999999998754 2 5789995433 44433211 1111 12446799999
Q ss_pred EEecCCC
Q 041651 414 LIGGSNP 420 (557)
Q Consensus 414 ~v~GG~~ 420 (557)
+++||.+
T Consensus 564 l~s~~~D 570 (577)
T 2ymu_A 564 IASASSD 570 (577)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9998864
No 56
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.18 E-value=0.094 Score=54.26 Aligned_cols=135 Identities=7% Similarity=0.098 Sum_probs=72.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+||..+.+....-..+..... ++..+++++++|+.+ ..+.+||.. +.+-.. . +......-..... +
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v~--~l~~~~~~l~sg~~d---g~i~vwd~~---~~~~~~--~-~~~h~~~v~~l~~-~ 222 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSVL--CLQYDERVIITGSSD---STVRVWDVN---TGEMLN--T-LIHHCEAVLHLRF-N 222 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCEE--EEECCSSEEEEEETT---SCEEEEESS---SCCEEE--E-ECCCCSCEEEEEC-C
T ss_pred EEEEeCCCCeEEEEEcCCCCcEE--EEEECCCEEEEEcCC---CeEEEEECC---CCcEEE--E-EcCCCCcEEEEEE-c
Confidence 78899888765443222222111 222389999999863 579999987 443221 1 2222222233334 6
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEE
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVL 255 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~ 255 (557)
+..++.|+.++ .+.+| .... ........+.. ...+...+..+|+.++.|+. ...+||..+.+-.
T Consensus 223 ~~~l~s~s~dg-~i~vwd~~~~-----~~~~~~~~~~~-------~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 223 NGMMVTCSKDR-SIAVWDMASP-----TDITLRRVLVG-------HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp TTEEEEEETTS-CEEEEECSSS-----SCCEEEEEECC-------CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEeeCCC-cEEEEeCCCC-----CCceeeeEecC-------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEE
Confidence 67777777654 45566 3210 11110011111 11233445558888888864 4678999988765
Q ss_pred EEe
Q 041651 256 KEY 258 (557)
Q Consensus 256 ~~~ 258 (557)
..+
T Consensus 290 ~~~ 292 (435)
T 1p22_A 290 RTL 292 (435)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.17 E-value=0.002 Score=65.20 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=32.8
Q ss_pred EEEEECCCCcEEECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 99 SILYDVATNAYRPLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
+.+||..++.|..+... +.....+.+..++|+.+++|+.+ ..+++||..
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~ 85 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR 85 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC---
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC
Confidence 66899999888776653 23333345667899999999863 579999987
No 58
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.17 E-value=0.19 Score=48.29 Aligned_cols=239 Identities=13% Similarity=0.083 Sum_probs=118.4
Q ss_pred EEEEECCCCcEEECccCCC-cccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQTD-TWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
+..||+. +++........ ....+.++..+|++|+.... ...+.+||+. .++.... ++ ....-.+++.-
T Consensus 43 v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~----g~~~~~~--~~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 43 ISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK----GGFTEYP--LPQPDSGPYGITEG 112 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT----SCEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC----CCeEEec--CCCCCCCCccceEC
Confidence 6788887 77765433211 22334455678999997642 2568899986 2333221 21 11223345555
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEE-EeeCCcEEEEE--cCceEEEeCCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVH-LLPDGNLFIFA--NTRSILFDYKQN 252 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~-~~~~G~ifv~g--g~~~~~yDp~t~ 252 (557)
++|++|+..... ..+..| +. + +...... .. ....|... ..++|+||+.. +....+||+ ++
T Consensus 113 ~~g~l~v~~~~~-~~i~~~~~~---g----~~~~~~~-~~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 113 LNGDIWFTQLNG-DRIGKLTAD---G----TIYEYDL-PN------KGSYPAFITLGSDNALWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp STTCEEEEETTT-TEEEEECTT---S----CEEEEEC-SS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCEEEEccCC-CeEEEECCC---C----CEEEccC-CC------CCCCceeEEECCCCCEEEEecCCCeEEEECC-CC
Confidence 689999875432 233344 32 0 1111111 00 01234443 34689999876 345778998 56
Q ss_pred eEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcce
Q 041651 253 KVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWV 332 (557)
Q Consensus 253 ~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~ 332 (557)
+... .. ++.. ...+ ..+.+. .+++||++.... +.+.++|+. .++.
T Consensus 177 ~~~~-~~-~~~~--~~~~---~~i~~d---------~~g~l~v~~~~~----------------~~i~~~~~~---g~~~ 221 (300)
T 2qc5_A 177 KLEE-YP-LPTN--AAAP---VGITSG---------NDGALWFVEIMG----------------NKIGRITTT---GEIS 221 (300)
T ss_dssp CEEE-EE-CSST--TCCE---EEEEEC---------TTSSEEEEETTT----------------TEEEEECTT---CCEE
T ss_pred cEEE-ee-CCCC--CCCc---ceEEEC---------CCCCEEEEccCC----------------CEEEEEcCC---CcEE
Confidence 6552 32 2221 1111 122211 167888865322 123334331 1232
Q ss_pred eecCC--CCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecC-CCCCcccccccceecc
Q 041651 333 MEEMP--LPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVME-PSTRPRMYHSSAILLT 409 (557)
Q Consensus 333 ~~~M~--~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~-~~~~~R~yhs~a~llp 409 (557)
...++ ..+. .+.++-++|+||+..... ..+.+||+ +. ++.... +....+ -+ ..++.+
T Consensus 222 ~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~-------------~~i~~~~~-~g---~~~~~~~~~~~~~-~~-~i~~~~ 281 (300)
T 2qc5_A 222 EYDIPTPNARP-HAITAGKNSEIWFTEWGA-------------NQIGRITN-DN---TIQEYQLQTENAE-PH-GITFGK 281 (300)
T ss_dssp EEECSSTTCCE-EEEEECSTTCEEEEETTT-------------TEEEEECT-TS---CEEEEECCSTTCC-CC-CEEECT
T ss_pred EEECCCCCCCc-eEEEECCCCCEEEeccCC-------------CeEEEECC-CC---cEEEEECCccCCc-cc-eeEeCC
Confidence 22112 1111 233455789999876321 15688998 44 554331 111111 12 234568
Q ss_pred CCcEEEecC
Q 041651 410 DGRVLIGGS 418 (557)
Q Consensus 410 dG~V~v~GG 418 (557)
||++|++..
T Consensus 282 ~g~l~v~~~ 290 (300)
T 2qc5_A 282 DGSVWFALK 290 (300)
T ss_dssp TSCEEEECS
T ss_pred CCCEEEEcc
Confidence 999999765
No 59
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.17 E-value=0.1 Score=52.20 Aligned_cols=95 Identities=13% Similarity=0.001 Sum_probs=50.1
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYN-DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~-~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+..+|+++++++.+.......-...++-+||+.+.+++.. ++...+.+|+.... +.+.+.+.. .......++....
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~-~~~~~~~p~~~~~ 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNT-QKTMGADPCYLTT 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEE-EECSSSCEEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeE-eccCCCCcEEEEE
Confidence 46677889999887654322222234566889855555432 12345665543310 455554432 3322224444455
Q ss_pred cCCcEEEEcCcCCCceeEe
Q 041651 177 PDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y 195 (557)
||+.+++......++.+|
T Consensus 108 -dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 108 -NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp -CSSEEEEEETTTTEEEEE
T ss_pred -CCCEEEEEECCCCEEEEE
Confidence 777555555444556666
No 60
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.16 E-value=0.14 Score=50.22 Aligned_cols=141 Identities=12% Similarity=0.081 Sum_probs=69.5
Q ss_pred EEEEECC-CCcEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 99 SILYDVA-TNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~-t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
+.+||.. +++++.+... ......+.++-+||+.+++++..+ ..+.+||.... +.++..+.. +.....-..++.-
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~s 92 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPD-DGALTFAAE-SALPGSLTHISTD 92 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTT-TCCEEEEEE-EECSSCCSEEEEC
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCC-CCceeeccc-cccCCCCcEEEEc
Confidence 5677763 4455443321 122223345667998666666532 56777765411 445554432 3322233445566
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccce-EEEeeCCc-EEEEE--cCceEEEeCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPF-VHLLPDGN-LFIFA--NTRSILFDYKQ 251 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~-~~~~~~G~-ifv~g--g~~~~~yDp~t 251 (557)
+||+.+++++.....+.+| ... + ........+.. ...+. +...++|+ ||+.+ +....+||..+
T Consensus 93 ~dg~~l~~~~~~~~~i~~~d~~~--~---~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 93 HQGQFVFVGSYNAGNVSVTRLED--G---LPVGVVDVVEG-------LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET--T---EEEEEEEEECC-------CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCEEEEEecCCCeEEEEECCC--C---ccccccccccC-------CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 7888655555544455666 310 0 01111111100 01122 34567887 66554 24577899887
Q ss_pred -CeEE
Q 041651 252 -NKVL 255 (557)
Q Consensus 252 -~~W~ 255 (557)
.+..
T Consensus 161 ~~~~~ 165 (343)
T 1ri6_A 161 DGHLV 165 (343)
T ss_dssp TSCEE
T ss_pred CCcee
Confidence 5553
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.16 E-value=0.032 Score=57.02 Aligned_cols=233 Identities=10% Similarity=0.100 Sum_probs=115.3
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcee-----cCCcccc-cccCcceEEEecCC-cEEEEcCcCCCceeE
Q 041651 123 GSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWI-----ELPQHLS-ERRWYATNQILPDG-RIIIIGGRRQFNYEF 194 (557)
Q Consensus 123 ~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~-----~~~~~m~-~~R~y~s~~~L~dG-~vyvvGG~~~~~~E~ 194 (557)
.+..+ ++.++++|+.+ ..+.+||.. +.... ... .+. ....-.+++..++| .+++.|+.++ .+.+
T Consensus 87 ~~~~p~~~~~l~s~s~d---g~v~vw~~~---~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~i 158 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSED---CTVMVWEIP---DGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILV 158 (402)
T ss_dssp EEECTTCTTEEEEEETT---SEEEEEECC---TTCCSSCBCSCSE-EEECCSSCEEEEEECSSBTTEEEEEETTS-CEEE
T ss_pred EEeCCCCCCEEEEEeCC---CeEEEEEcc---CCCCccccCCceE-EecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEE
Confidence 44556 88999999863 579999987 43321 111 122 22333455666777 6888887664 4556
Q ss_pred e-cCCCCCCCCCcee-eecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccC
Q 041651 195 Y-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYP 270 (557)
Q Consensus 195 y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~ 270 (557)
| ... .+.. .+.. .... ..--.+...++|+.++.|+. ...+||.++.+....+...... .+.
T Consensus 159 wd~~~------~~~~~~~~~-~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~-- 223 (402)
T 2aq5_A 159 WDVGT------GAAVLTLGP-DVHP-----DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG-TRP-- 223 (402)
T ss_dssp EETTT------TEEEEEECT-TTCC-----SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS-SSC--
T ss_pred EECCC------CCccEEEec-CCCC-----CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC-Ccc--
Confidence 6 321 1111 1100 0000 00112344568998888874 4678999988765433111110 111
Q ss_pred CCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEEcCC
Q 041651 271 STGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPN 350 (557)
Q Consensus 271 ~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpd 350 (557)
...+..| +++++++|..... ...+..+|+......-....+.....-.....-||
T Consensus 224 --~~~~~~~----------~~~~l~~g~~~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 224 --VHAVFVS----------EGKILTTGFSRMS-------------ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp --CEEEECS----------TTEEEEEEECTTC-------------CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred --eEEEEcC----------CCcEEEEeccCCC-------------CceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 1222322 7888888831100 12333444432111111112222222223345688
Q ss_pred CeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCc--eEecCCCCCcccccccceeccCCcEEEecCC
Q 041651 351 GDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRR--FSVMEPSTRPRMYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 351 G~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~--W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~ 419 (557)
|+.+++.|...| .+.+||..+. + ...+..... ..........|||++++.++.
T Consensus 279 ~~~l~~~g~~dg------------~i~i~d~~~~---~~~~~~l~~~~~-~~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 279 TNIVYLCGKGDS------------SIRYFEITSE---APFLHYLSMFSS-KESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp TTEEEEEETTCS------------CEEEEEECSS---TTCEEEEEEECC-SSCCSEEEECCGGGSCGGGTE
T ss_pred CCEEEEEEcCCC------------eEEEEEecCC---CcceEeeccccc-CCcccceEEecccccceecce
Confidence 887765443212 5789998876 4 333322211 111123456789988876654
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.14 E-value=0.043 Score=58.93 Aligned_cols=251 Identities=9% Similarity=0.008 Sum_probs=125.1
Q ss_pred EEEEECCCC----c-EEECccCCCcc-cccCeecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCC------ceecCCccc
Q 041651 99 SILYDVATN----A-YRPLMVQTDTW-CSSGSVLP--NGTLVQSGGYNDGDHVVRTFTPCDDDQC------DWIELPQHL 164 (557)
Q Consensus 99 ~~~yDp~t~----~-w~~l~~~~~~~-c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~~~t~------~W~~~~~~m 164 (557)
+.+||..++ + ...+. .+... -.+.++.+ ||+++++|+.+ ..+++||.. +. +...... +
T Consensus 41 v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~~~---~~~~~~~~~~~~~~~-~ 112 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWGWT---FDKESNSVEVNVKSE-F 112 (615)
T ss_dssp EEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEEEE---EEGGGTEEEEEEEEE-E
T ss_pred EEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecCC---CEEEEEeCC---CCcccccccccccch-h
Confidence 678888876 3 23332 22222 23456678 99999999863 578889875 22 2222211 2
Q ss_pred c-cccCcceEEEecCCcEEEEcCcCCC---ceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCc-EEEE
Q 041651 165 S-ERRWYATNQILPDGRIIIIGGRRQF---NYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN-LFIF 239 (557)
Q Consensus 165 ~-~~R~y~s~~~L~dG~vyvvGG~~~~---~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~-ifv~ 239 (557)
. ....-.+++..+||+.++++|.+.. .+.+|.. .+. ...+.... ..--.+...++|+ +++.
T Consensus 113 ~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-------~~~--~~~~~~~~-----~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 113 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-------GNS--LGEVSGHS-----QRINACHLKQSRPMRSMT 178 (615)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-------CCE--EEECCSCS-----SCEEEEEECSSSSCEEEE
T ss_pred hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-------CCc--ceeeecCC-----ccEEEEEECCCCCcEEEE
Confidence 2 2333455666789999999886532 2223321 010 00010100 0011234456776 6777
Q ss_pred EcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccc-cEEEEEcCCCCccccccccccccccC
Q 041651 240 ANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQ-AEIMICGGAQNASFALATQGVFIRAI 316 (557)
Q Consensus 240 gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~-g~I~v~GG~~~~~~~~~~~~~~~pa~ 316 (557)
|+. ...+||..+.+....+. ........- -.....| + ++.+++|+.+.
T Consensus 179 ~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~v-~~~~~~~----------~~~~~l~~~~~dg--------------- 229 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPFKFSASDR---THHKQGSFV-RDVEFSP----------DSGEFVITVGSDR--------------- 229 (615)
T ss_dssp EETTTEEEEEETTTBEEEEEEC---SSSCTTCCE-EEEEECS----------TTCCEEEEEETTC---------------
T ss_pred EeCCCcEEEEeCCCcceeeeec---ccCCCCceE-EEEEECC----------CCCCEEEEEeCCC---------------
Confidence 764 46789988877554332 110100000 0112222 5 78888887642
Q ss_pred CceEEEEecCCCCcceeecC-----CCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEe
Q 041651 317 STCGRLVVSHANPSWVMEEM-----PLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSV 391 (557)
Q Consensus 317 ~s~~~~d~~~~~~~W~~~~M-----~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~ 391 (557)
.+..+|+... +... .+ .....-.+.... +++.+++++.+ + .+.+||..+. +-..
T Consensus 230 -~i~vwd~~~~--~~~~-~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-~------------~i~~wd~~~~---~~~~ 288 (615)
T 1pgu_A 230 -KISCFDGKSG--EFLK-YIEDDQEPVQGGIFALSWL-DSQKFATVGAD-A------------TIRVWDVTTS---KCVQ 288 (615)
T ss_dssp -CEEEEETTTC--CEEE-ECCBTTBCCCSCEEEEEES-SSSEEEEEETT-S------------EEEEEETTTT---EEEE
T ss_pred -eEEEEECCCC--CEeE-EecccccccCCceEEEEEc-CCCEEEEEcCC-C------------cEEEEECCCC---cEEE
Confidence 2233343221 1111 11 222222223344 89999988754 2 5789999876 4332
Q ss_pred cCCCC-CcccccccceeccCCcEEEecCCCC
Q 041651 392 MEPST-RPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 392 ~~~~~-~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
.-... .+......++..++++.+++|+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp EEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred EEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 11111 1111122344456888888888654
No 63
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.12 E-value=0.11 Score=52.47 Aligned_cols=232 Identities=15% Similarity=0.160 Sum_probs=119.2
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEecCCCCCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDL 202 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~ 202 (557)
...-+||+.+++||.+ ..+++||.. +.+-...-. + ...+-.+++.-++|+.++.||.++ .+.+|+.....
T Consensus 70 ~~~s~d~~~l~s~s~D---g~v~vWd~~---~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~- 139 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQD---GKVIVWDSF---TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDK- 139 (354)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCT-
T ss_pred EEECCCCCEEEEEeCC---CeEEEEECC---CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEeccc-
Confidence 3455799999999873 579999987 433322111 1 234556677788999999999875 34455221000
Q ss_pred CCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecC
Q 041651 203 SFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPL 280 (557)
Q Consensus 203 ~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~ 280 (557)
..........+... ...--.+...++++.++.|+. ...+||..+.+....+ .+..... -...+.|.
T Consensus 140 ~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h~~~v----~~~~~~~~ 207 (354)
T 2pbi_B 140 NENMAAKKKSVAMH-----TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HGHGADV----LCLDLAPS 207 (354)
T ss_dssp TCCSGGGCEEEEEC-----SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---ECCSSCE----EEEEECCC
T ss_pred cccccccceeeecc-----CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCCCCCe----EEEEEEeC
Confidence 00000000000000 000112334567877777654 4678999988765433 2110000 01111111
Q ss_pred cCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCc
Q 041651 281 DERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGA 359 (557)
Q Consensus 281 ~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~ 359 (557)
.+++.+++|+.+. ++..+|+.. .+.... ........ +....|+|+.+++|+.
T Consensus 208 --------~~g~~l~sgs~Dg----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 208 --------ETGNTFVSGGCDK----------------KAMVWDMRS--GQCVQAFETHESDVN-SVRYYPSGDAFASGSD 260 (354)
T ss_dssp --------SSCCEEEEEETTS----------------CEEEEETTT--CCEEEEECCCSSCEE-EEEECTTSSEEEEEET
T ss_pred --------CCCCEEEEEeCCC----------------eEEEEECCC--CcEEEEecCCCCCeE-EEEEeCCCCEEEEEeC
Confidence 1467888888652 222333322 111111 11222222 2345689999999886
Q ss_pred CCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccCCcEEEecCCC
Q 041651 360 QLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpdG~V~v~GG~~ 420 (557)
+ + ++.+||..++ +-. ..... ............|||+++++|+.+
T Consensus 261 D-~------------~v~lwd~~~~---~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 261 D-A------------TCRLYDLRAD---REVAIYSKE-SIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp T-S------------CEEEEETTTT---EEEEEECCT-TCCSCEEEEEECTTSSEEEEEETT
T ss_pred C-C------------eEEEEECCCC---cEEEEEcCC-CcccceeEEEEeCCCCEEEEEECC
Confidence 5 2 5789998776 422 22111 111122334567899999999864
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.10 E-value=0.075 Score=59.50 Aligned_cols=134 Identities=10% Similarity=0.131 Sum_probs=75.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+++....-..+.....+.+..+||+.+++|+.+ ..+.+||.. +.+.... +. ....-.+++.-
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~---~~~~~~~---~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN---TGEKVVD---FEAHPDYIRSIAVH 106 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT---TCCEEEE---EECCSSCEEEEEEC
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECC---CCcEEEE---EecCCCCEEEEEEe
Confidence 37899988876544323333334455667899999999863 579999987 4443321 22 22223345566
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEee-CCcEEEEEcC--ceEEEeCCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLP-DGNLFIFANT--RSILFDYKQN 252 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~-~G~ifv~gg~--~~~~yDp~t~ 252 (557)
+||+.+++|+.++ .+.+| ... .+.....+..... .--.+...+ +|+++++|+. ...+||..+.
T Consensus 107 ~~~~~l~~~~~dg-~i~vw~~~~-------~~~~~~~~~~~~~-----~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 107 PTKPYVLSGSDDL-TVKLWNWEN-------NWALEQTFEGHEH-----FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp SSSSEEEEEETTS-EEEEEEGGG-------TSEEEEEEECCSS-----CEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred CCCCEEEEEcCCC-EEEEEECCC-------CceEEEEEcCCCC-----cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 7898888887653 45566 321 1211111111000 001223345 7888888764 4678998665
Q ss_pred e
Q 041651 253 K 253 (557)
Q Consensus 253 ~ 253 (557)
+
T Consensus 174 ~ 174 (814)
T 3mkq_A 174 T 174 (814)
T ss_dssp S
T ss_pred c
Confidence 4
No 65
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.10 E-value=0.12 Score=56.43 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=71.8
Q ss_pred eEEEEECCCCcEEE-Ccc------CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCc
Q 041651 98 HSILYDVATNAYRP-LMV------QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWY 170 (557)
Q Consensus 98 ~~~~yDp~t~~w~~-l~~------~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y 170 (557)
.+.+||..+++... +.. .+.....+.++.+||+.+++|+.+ +.+++||.. +.+....-. +...-..
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~---~~~~~~~~~-~~~~~~~ 285 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA---TLKVEKTIP-VGTRIED 285 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEEE-CCSSGGG
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCceeeeec-CCCCccc
Confidence 37889988776543 211 233233345566899999999863 689999987 544432100 1100000
Q ss_pred ceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEE
Q 041651 171 ATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILF 247 (557)
Q Consensus 171 ~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~y 247 (557)
.......+++.++.++.++ .+.+| +.. .. ....+.... ..--.+...+||+.++.|+. ...+|
T Consensus 286 ~~~~~~~~~~~l~s~s~d~-~i~~~~~~~------~~--~~~~~~gh~-----~~v~~l~~spdg~~l~s~s~D~~v~~W 351 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANG-FINFVNPEL------GS--IDQVRYGHN-----KAITALSSSADGKTLFSADAEGHINSW 351 (611)
T ss_dssp CEEEEEECSSCEEEEETTC-CEEEEETTT------TE--EEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEEEcCCEEEEEeCCC-cEEEEeCCC------CC--cceEEcCCC-----CCEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 1112222677777776654 34555 331 01 111111100 00112334578998888874 46788
Q ss_pred eCCCCeEE
Q 041651 248 DYKQNKVL 255 (557)
Q Consensus 248 Dp~t~~W~ 255 (557)
|..+.+..
T Consensus 352 d~~~~~~~ 359 (611)
T 1nr0_A 352 DISTGISN 359 (611)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcee
Confidence 88776543
No 66
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.07 E-value=0.0078 Score=60.70 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=40.0
Q ss_pred EEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCC
Q 041651 345 MILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 345 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
....|+|+++++|+.+ + ++.+||..++ +|.....+.-....-......|||+.+++|+.+.
T Consensus 156 ~~~~p~~~~l~s~s~d-~------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 156 VVWHPSQELLASASYD-D------------TVKLYREEED---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp EEECSSSSCEEEEETT-S------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCC-C------------cEEEEEecCC---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 3456899999998765 2 5789998888 7764333221111112344578999999998754
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.06 E-value=0.15 Score=52.95 Aligned_cols=249 Identities=14% Similarity=0.191 Sum_probs=119.4
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe-
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL- 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L- 176 (557)
+.+||..+++-...-..+.....+....+++ ++++|+.+ ..+.+||.. +.+-.. . +. ....-.+++..
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~---~~~~~~--~-~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIK---KGCCTH--V-FEGHNSTVRCLDIVE 213 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETT---TTEEEE--E-ECCCSSCEEEEEEEE
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECC---CCcEEE--E-ECCCCCccEEEEEec
Confidence 7899988876443222222222223444566 77777763 579999987 443211 1 22 11112222333
Q ss_pred -cCCcEEEEcCcCCCceeEe-cCCCCCCC----CCcee-ee--c----ccccccccccCCccceEEEeeCCcEEEEEcC-
Q 041651 177 -PDGRIIIIGGRRQFNYEFY-PKSDEDLS----FPQTF-ML--H----FLLETRDYAENNLYPFVHLLPDGNLFIFANT- 242 (557)
Q Consensus 177 -~dG~vyvvGG~~~~~~E~y-P~~~~~~~----~~~w~-~~--~----~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~- 242 (557)
++++.++.|+.++ ++.+| ........ ..... .. + .+... ......+...+.++|++++.|+.
T Consensus 214 ~~~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~~~d 289 (464)
T 3v7d_B 214 YKNIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV---LRGHMASVRTVSGHGNIVVSGSYD 289 (464)
T ss_dssp SSSCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE---ECCCSSCEEEEEEETTEEEEEETT
T ss_pred CCCCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE---ccCccceEEEEcCCCCEEEEEeCC
Confidence 4778888887664 34444 21100000 00000 00 0 00000 01112233455678888888874
Q ss_pred -ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEE
Q 041651 243 -RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGR 321 (557)
Q Consensus 243 -~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~ 321 (557)
...+||..+.+-...+ ........ ...+.| +++.+++|+.+. .+..
T Consensus 290 ~~i~vwd~~~~~~~~~~---~~~~~~v~----~~~~~~----------~~~~l~sg~~dg----------------~i~v 336 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYIL---SGHTDRIY----STIYDH----------ERKRCISASMDT----------------TIRI 336 (464)
T ss_dssp SCEEEEETTTTEEEEEE---CCCSSCEE----EEEEET----------TTTEEEEEETTS----------------CEEE
T ss_pred CeEEEEECCCCcEEEEe---cCCCCCEE----EEEEcC----------CCCEEEEEeCCC----------------cEEE
Confidence 4678999888765433 21101110 112222 567778887652 2233
Q ss_pred EEecCCCCcceee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccc
Q 041651 322 LVVSHANPSWVME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRM 400 (557)
Q Consensus 322 ~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~ 400 (557)
+|+.. .+.. .+.........+.. +++.+++|+.+ | .+.+||..+.. ..+... ....
T Consensus 337 wd~~~----~~~~~~~~~h~~~v~~~~~-~~~~l~s~s~d-g------------~v~vwd~~~~~-~~~~~~----~~~~ 393 (464)
T 3v7d_B 337 WDLEN----GELMYTLQGHTALVGLLRL-SDKFLVSAAAD-G------------SIRGWDANDYS-RKFSYH----HTNL 393 (464)
T ss_dssp EETTT----TEEEEEECCCSSCEEEEEE-CSSEEEEEETT-S------------EEEEEETTTCC-EEEEEE----CTTC
T ss_pred EECCC----CcEEEEEeCCCCcEEEEEE-cCCEEEEEeCC-C------------cEEEEECCCCc-eeeeec----CCCC
Confidence 33321 1111 11111112223344 67888888765 2 57899998761 122221 1111
Q ss_pred ccccceeccCCcEEEecC
Q 041651 401 YHSSAILLTDGRVLIGGS 418 (557)
Q Consensus 401 yhs~a~llpdG~V~v~GG 418 (557)
.....+.+||+++++|+
T Consensus 394 -~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 394 -SAITTFYVSDNILVSGS 410 (464)
T ss_dssp -CCEEEEEECSSEEEEEE
T ss_pred -ccEEEEEeCCCEEEEec
Confidence 12345678999999987
No 68
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.04 E-value=0.12 Score=52.19 Aligned_cols=226 Identities=11% Similarity=0.112 Sum_probs=104.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc-cc-ccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ-HL-SERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSD 199 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~-~m-~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~ 199 (557)
.+..+|+++++.+.. ..+++||.. +.+-..... .+ .....-.+++..+||+.++.|+.++ .+.+| ...
T Consensus 100 ~~~s~d~~~l~~s~d----g~v~lWd~~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iwd~~~- 170 (357)
T 4g56_B 100 VAWVSEKGILVASDS----GAVELWEIL---EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVWDLSQ- 170 (357)
T ss_dssp EEEETTTEEEEEETT----SCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTT-
T ss_pred EEEcCCCCEEEEECC----CEEEEeecc---ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCC-
Confidence 456678887765542 469999987 332211111 01 1223344566778999999988764 45566 331
Q ss_pred CCCCCCceeeecccccccccccCCccceEEEeeCCc-EEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceE
Q 041651 200 EDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN-LFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSV 276 (557)
Q Consensus 200 ~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~-ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~v 276 (557)
+ + ....+....+ .--.+...++++ +++.++. ...+||.++.+... .+........ -.++
T Consensus 171 -~----~--~~~~~~~h~~-----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~---~~~~~~~~~~---v~~v 232 (357)
T 4g56_B 171 -K----A--VLKSYNAHSS-----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT---RIDFCASDTI---PTSV 232 (357)
T ss_dssp -T----E--EEEEECCCSS-----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC---BCCCTTCCSC---EEEE
T ss_pred -C----c--EEEEEcCCCC-----CEEEEEEccCCCceeeeeccCCceEEEECCCCceee---eeeecccccc---ccch
Confidence 0 1 1111111000 001122345554 6777664 46789988776331 1111100110 1122
Q ss_pred -eecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEEcCCC-eEE
Q 041651 277 -LLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNG-DVI 354 (557)
Q Consensus 277 -llp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpdG-~I~ 354 (557)
..|. +++++++|+.+. .+..+|+.... .-........... +...-|+| +++
T Consensus 233 ~~sp~---------~~~~la~g~~d~----------------~i~~wd~~~~~-~~~~~~~~~~~v~-~l~~sp~~~~~l 285 (357)
T 4g56_B 233 TWHPE---------KDDTFACGDETG----------------NVSLVNIKNPD-SAQTSAVHSQNIT-GLAYSYHSSPFL 285 (357)
T ss_dssp EECTT---------STTEEEEEESSS----------------CEEEEESSCGG-GCEEECCCSSCEE-EEEECSSSSCCE
T ss_pred hhhhc---------ccceEEEeeccc----------------ceeEEECCCCc-EeEEEeccceeEE-EEEEcCCCCCEE
Confidence 2121 467888887542 23334443210 0011111222222 22344776 577
Q ss_pred EEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceecc-CCcEEEecCCCC
Q 041651 355 IINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLT-DGRVLIGGSNPH 421 (557)
Q Consensus 355 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llp-dG~V~v~GG~~~ 421 (557)
+.|+.+ + ++.+||..+. +-...-. ..... .....-| |++++++||.++
T Consensus 286 asgs~D-~------------~i~iwd~~~~---~~~~~~~-H~~~V--~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 286 ASISED-C------------TVAVLDADFS---EVFRDLS-HRDFV--TGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp EEEETT-S------------CEEEECTTSC---EEEEECC-CSSCE--EEEEECSSSTTEEEEEETTS
T ss_pred EEEeCC-C------------EEEEEECCCC---cEeEECC-CCCCE--EEEEEeCCCCCEEEEEcCCC
Confidence 777654 2 5789998876 5432211 11111 1123345 899999998654
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.04 E-value=0.069 Score=55.07 Aligned_cols=133 Identities=11% Similarity=0.115 Sum_probs=73.4
Q ss_pred eEEEEECCCCcEEECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 98 HSILYDVATNAYRPLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
.+.+||..|++...+-.. +.....+.+..+||+.+++|+.+ ..+++||.. +.+-.. . +........+ .
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~---~~~~~~--~-~~~h~~~v~~-~ 195 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKRLR--N-MTSHSARVGS-L 195 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TTEEEE--E-ECCCSSCEEE-E
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC---CCcEEE--E-EeCCCCceEE-E
Confidence 488999999987765432 22223345667899999999873 579999987 443221 1 2222222222 3
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCC
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQN 252 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~ 252 (557)
-.++++++.|+.+. .+.++ .... .. ....+.... ...-.....++|+.++.++.+ ..+||..++
T Consensus 196 s~~~~~l~sgs~d~-~i~~~d~~~~------~~-~~~~~~~h~-----~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 196 SWNSYILSSGSRSG-HIHHHDVRVA------EH-HVATLSGHS-----QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEETTEEEEEETTS-EEEEEETTSS------SC-EEEEEECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred eeCCCEEEEEeCCC-ceeEeeeccc------ce-eeEEecccc-----cceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 34889999888764 23333 2110 10 010011100 001123455688888888754 567887665
Q ss_pred e
Q 041651 253 K 253 (557)
Q Consensus 253 ~ 253 (557)
+
T Consensus 263 ~ 263 (420)
T 4gga_A 263 E 263 (420)
T ss_dssp S
T ss_pred c
Confidence 3
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.01 E-value=0.093 Score=52.18 Aligned_cols=133 Identities=11% Similarity=0.046 Sum_probs=71.0
Q ss_pred CCCCCCCceEEccCC-cccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEE
Q 041651 32 PYAGSQGEWNLLHES-IGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYR 110 (557)
Q Consensus 32 ~~~~~~g~W~~~~~~-~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~ 110 (557)
.+|..+|+++.+... ....+...++-++|++|+.+... + ...+.+||..+++++
T Consensus 22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~----------~---------------~~~v~~~~~~~g~~~ 76 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED----------D---------------EGGIAAWQIDGQTAH 76 (347)
T ss_dssp EEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET----------T---------------EEEEEEEEEETTEEE
T ss_pred EEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC----------C---------------CceEEEEEecCCcEE
Confidence 335667777664311 12223445566899966665421 0 124788999888877
Q ss_pred ECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc----------ccCcceEEEecC
Q 041651 111 PLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE----------RRWYATNQILPD 178 (557)
Q Consensus 111 ~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~----------~R~y~s~~~L~d 178 (557)
.+... ......+.++.+||+.+++.+.. ...+.+||... ..+...+.. +.. ...-++++.-+|
T Consensus 77 ~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~--~g~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 77 KLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAA--DGALTLTDT-VQHSGHGPRPEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECT--TSCEEEEEE-EECCCCCSSTTCSSCCEEEEEECTT
T ss_pred EeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCC--CCCeeecce-eecCCCCCCccccCCCceEEEECCC
Confidence 66542 12222345567899866655532 25688888742 222222211 111 112334667789
Q ss_pred CcEEEEcCcCCCceeEe
Q 041651 179 GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y 195 (557)
|++|+.+. ....+.+|
T Consensus 152 g~l~v~~~-~~~~v~~~ 167 (347)
T 3hfq_A 152 NRLAVIDL-GSDKVYVY 167 (347)
T ss_dssp SCEEEEET-TTTEEEEE
T ss_pred CcEEEEeC-CCCEEEEE
Confidence 99776643 33455566
No 71
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.00 E-value=0.21 Score=50.56 Aligned_cols=234 Identities=9% Similarity=0.104 Sum_probs=114.2
Q ss_pred ecCCCcEEEEcCCCC--------CCCeEEEEcCCCCCCCceec---CCc-ccccccCcc-eEEEecCCcEEEEc-CcCCC
Q 041651 125 VLPNGTLVQSGGYND--------GDHVVRTFTPCDDDQCDWIE---LPQ-HLSERRWYA-TNQILPDGRIIIIG-GRRQF 190 (557)
Q Consensus 125 ~l~dG~i~v~GG~~~--------g~~~v~~ydp~~~~t~~W~~---~~~-~m~~~R~y~-s~~~L~dG~vyvvG-G~~~~ 190 (557)
+-.++.+++.|.... ..+.+++|+..+. ...... ..- .......|. +++.-+||+.++++ |....
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~ 157 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKV-NDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPA 157 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETT-TTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCC-CceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence 345788888886532 1356787765421 121111 110 011111122 35556799987764 44445
Q ss_pred ceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-ceEEEeCCCCeEEEEecCCCCCCCCc
Q 041651 191 NYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-RSILFDYKQNKVLKEYPEIPGADPRN 268 (557)
Q Consensus 191 ~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-~~~~yDp~t~~W~~~~p~lp~~~~r~ 268 (557)
++.+| +.. + ... . .+ +.. ...+ .+...|||++++.+.. ...+++..+++...... ... ...
T Consensus 158 ~i~iwd~~~--~----~~~-~-~~-~~~----~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~-~~~--~~~ 220 (365)
T 4h5i_A 158 IMRIIDPSD--L----TEK-F-EI-ETR----GEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT-DFD--KNW 220 (365)
T ss_dssp EEEEEETTT--T----EEE-E-EE-ECS----SCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC-CCC--TTE
T ss_pred EEEEeECCC--C----cEE-E-Ee-CCC----CceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee-cCC--CCC
Confidence 66777 441 1 111 0 01 110 0111 2445689999888764 46778887776542221 111 111
Q ss_pred cCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee---cCC--CCceee
Q 041651 269 YPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME---EMP--LPRVMG 343 (557)
Q Consensus 269 ~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~---~M~--~~R~~~ 343 (557)
.. ......| +++.++.++.+.+.. ..+..++... ..+... .+. .....
T Consensus 221 ~v--~~v~fsp----------dg~~l~~~s~d~~~~------------~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~- 273 (365)
T 4h5i_A 221 SL--SKINFIA----------DDTVLIAASLKKGKG------------IVLTKISIKS--GNTSVLRSKQVTNRFKGIT- 273 (365)
T ss_dssp EE--EEEEEEE----------TTEEEEEEEESSSCC------------EEEEEEEEET--TEEEEEEEEEEESSCSCEE-
T ss_pred CE--EEEEEcC----------CCCEEEEEecCCcce------------eEEeeccccc--ceecceeeeeecCCCCCeE-
Confidence 00 1122223 678888776542110 1112233321 111111 111 11122
Q ss_pred eEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccCCcEEEecCCCC
Q 041651 344 DMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 344 ~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
+...-|||+++++|+.+ + ++.+||..+. +-. .+...+..... .....|||+.++.|+.++
T Consensus 274 ~~~~Spdg~~lasgs~D-~------------~V~iwd~~~~---~~~~~~~~gH~~~V~--~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 274 SMDVDMKGELAVLASND-N------------SIALVKLKDL---SMSKIFKQAHSFAIT--EVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEECTTSCEEEEEETT-S------------CEEEEETTTT---EEEEEETTSSSSCEE--EEEECTTSCEEEEEETTS
T ss_pred eEEECCCCCceEEEcCC-C------------EEEEEECCCC---cEEEEecCcccCCEE--EEEECCCCCEEEEEeCCC
Confidence 23456999999999765 2 6899998876 432 22222222222 345679999999998753
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.00 E-value=0.21 Score=51.68 Aligned_cols=237 Identities=12% Similarity=0.132 Sum_probs=116.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+||..+++-...-..+..... ++..++.++++|+.+ ..+.+||.. +.+-.. . +......-..... +
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~l~s~~~d---g~i~vwd~~---~~~~~~--~-~~~h~~~v~~~~~-~ 208 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTD---RTLKVWNAE---TGECIH--T-LYGHTSTVRCMHL-H 208 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEE--EEEEETTEEEEEETT---SCEEEEETT---TTEEEE--E-ECCCSSCEEEEEE-E
T ss_pred EEEEECCCCcEEEEEcCCCCCEE--EEEecCCEEEEEeCC---CeEEEEECC---cCcEEE--E-ECCCCCcEEEEEe-c
Confidence 78999988765432222221111 112257788888863 579999987 443211 1 2222222223334 6
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEE
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVL 255 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~ 255 (557)
++.+++|+.++ .+.+| ... + +. ...+.. ...+...+..+|+.++.|+. ...+||..+.+-.
T Consensus 209 ~~~l~s~s~dg-~i~~wd~~~--~----~~--~~~~~~-------~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 209 EKRVVSGSRDA-TLRVWDIET--G----QC--LHVLMG-------HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp TTEEEEEETTS-EEEEEESSS--C----CE--EEEEEC-------CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CCEEEEEeCCC-EEEEEECCC--C----cE--EEEEcC-------CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEe
Confidence 77788877654 45566 321 1 11 111111 11123344458888888764 4678999888755
Q ss_pred EEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeec
Q 041651 256 KEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEE 335 (557)
Q Consensus 256 ~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~ 335 (557)
..+ ... .. ....+. + +++.+++|+.+. .+..+|+.......+. .
T Consensus 273 ~~~---~~~--~~----~v~~~~------~----~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~-~ 316 (445)
T 2ovr_B 273 HTL---QGH--TN----RVYSLQ------F----DGIHVVSGSLDT----------------SIRVWDVETGNCIHTL-T 316 (445)
T ss_dssp EEE---CCC--SS----CEEEEE------E----CSSEEEEEETTS----------------CEEEEETTTCCEEEEE-C
T ss_pred EEe---cCC--CC----ceEEEE------E----CCCEEEEEeCCC----------------eEEEEECCCCCEEEEE-c
Confidence 433 211 11 111221 1 566777777542 2233443321111111 1
Q ss_pred CCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCce-EecCCCCCcccccccceeccCCcEE
Q 041651 336 MPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRF-SVMEPSTRPRMYHSSAILLTDGRVL 414 (557)
Q Consensus 336 M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-~~~~~~~~~R~yhs~a~llpdG~V~ 414 (557)
.... ...++. ++++.+++|+.+ | .+.+||..+. +- ..+.... ... ..+..+..+++.+
T Consensus 317 ~~~~--~v~~~~-~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~-~~~-~~v~~~~~~~~~l 375 (445)
T 2ovr_B 317 GHQS--LTSGME-LKDNILVSGNAD-S------------TVKIWDIKTG---QCLQTLQGPN-KHQ-SAVTCLQFNKNFV 375 (445)
T ss_dssp CCCS--CEEEEE-EETTEEEEEETT-S------------CEEEEETTTC---CEEEEECSTT-SCS-SCEEEEEECSSEE
T ss_pred CCcc--cEEEEE-EeCCEEEEEeCC-C------------eEEEEECCCC---cEEEEEccCC-CCC-CCEEEEEECCCEE
Confidence 1111 112223 478888888754 2 5789998776 32 2222110 011 1122344588999
Q ss_pred EecCCC
Q 041651 415 IGGSNP 420 (557)
Q Consensus 415 v~GG~~ 420 (557)
++|+.+
T Consensus 376 ~s~~~d 381 (445)
T 2ovr_B 376 ITSSDD 381 (445)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 998864
No 73
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.99 E-value=0.12 Score=52.47 Aligned_cols=239 Identities=13% Similarity=0.169 Sum_probs=116.1
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEcCcCCCceeEe-cCCC
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSD 199 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~ 199 (557)
+...-++|+.+++|+.+ ..+++||.. +.+-... +. ...+-.+++.-+||+.++.||.+.. +.+| -...
T Consensus 71 ~~~~sp~~~~l~s~s~D---~~v~iWd~~---~~~~~~~---~~~h~~~v~~~~~s~~g~~las~~~d~~-v~iw~~~~~ 140 (380)
T 3iz6_a 71 SLDWTPEKNWIVSASQD---GRLIVWNAL---TSQKTHA---IKLHCPWVMECAFAPNGQSVACGGLDSA-CSIFNLSSQ 140 (380)
T ss_dssp EEEECTTSSCEEEEETT---SEEEEEETT---TTEEEEE---EECCCTTCCCCEECTTSSEEEECCSSSC-CEEEECCCC
T ss_pred EEEEcCCCCEEEEEeCC---CeEEEEECC---CCccceE---EecCCCCEEEEEECCCCCEEEEeeCCCc-EEEEECCCC
Confidence 34556799999999873 579999987 4432211 21 2334455667789999999997753 3444 1100
Q ss_pred CCCCCCceeeecccccccccccCCccceEEEeeC-CcEEEEEcC--ceEEEeCCCCeEEEEec-CCCCCCCCccCCCCce
Q 041651 200 EDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPD-GNLFIFANT--RSILFDYKQNKVLKEYP-EIPGADPRNYPSTGSS 275 (557)
Q Consensus 200 ~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~-G~ifv~gg~--~~~~yDp~t~~W~~~~p-~lp~~~~r~~~~~g~~ 275 (557)
.. ..........+..... ... .+...++ +..++.|+. ...+||..+++-...+. ..+. . +.....
T Consensus 141 ~~-~~~~~~~~~~~~gh~~----~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~----~-h~~~v~ 209 (380)
T 3iz6_a 141 AD-RDGNMPVSRVLTGHKG----YAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS----G-HTADVL 209 (380)
T ss_dssp SS-CCCSSTTCCBCCCCSS----CCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS----S-CCSCEE
T ss_pred cc-ccCCccceeeccCCCc----ceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC----C-CccCeE
Confidence 00 0000000000100000 000 0111233 445556653 46789999887653331 1111 1 111111
Q ss_pred EeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEEcCCCeEEE
Q 041651 276 VLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVII 355 (557)
Q Consensus 276 vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpdG~I~v 355 (557)
.+ .. +.. ++.+++.|+.+. ++..+|+......-....-...... +....|||+.++
T Consensus 210 ~~-~~--~~~----~~~~l~sgs~D~----------------~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~ 265 (380)
T 3iz6_a 210 SL-SI--NSL----NANMFISGSCDT----------------TVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFG 265 (380)
T ss_dssp EE-EE--CSS----SCCEEEEEETTS----------------CEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEE
T ss_pred EE-Ee--ecC----CCCEEEEEECCC----------------eEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEE
Confidence 11 00 001 678888888652 2233343311111111111122222 335578999999
Q ss_pred EcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEe-cCCCCCc----ccccccceeccCCcEEEecCCCC
Q 041651 356 INGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSV-MEPSTRP----RMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 356 vGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~-~~~~~~~----R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
.|+.+ | ++.+||..+. +-.. ....... ...-....+.|||+.+++|+.+.
T Consensus 266 s~s~D-~------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 266 TGSDD-G------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp EECSS-S------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred EEcCC-C------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 99865 2 5789998876 3221 1111100 00112345678999999998643
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.96 E-value=0.16 Score=50.82 Aligned_cols=190 Identities=12% Similarity=0.113 Sum_probs=85.1
Q ss_pred CCCCCceEEccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECc
Q 041651 34 AGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLM 113 (557)
Q Consensus 34 ~~~~g~W~~~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~ 113 (557)
+..+|+++.+.......+.+.++-++|+.++......+ .+| .-.+..+|+.+++.+.+.
T Consensus 35 d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~------~~~---------------~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 35 NEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK------DQA---------------AVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp ETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS------TTC---------------EEEEEEEETTTTEEEEEE
T ss_pred eCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC------CCC---------------cEEEEEEeCCCCcEEEee
Confidence 55667777654221222344556678875555443210 001 112334556667777665
Q ss_pred cCC-CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-----------cccCcceEEEecCCc-
Q 041651 114 VQT-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-----------ERRWYATNQILPDGR- 180 (557)
Q Consensus 114 ~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-----------~~R~y~s~~~L~dG~- 180 (557)
... .......... ||+.+++.... ...+.+||...+ ........... ....-++++.-+||+
T Consensus 94 ~~~~~~~~p~~~~~-dg~~l~~~~~~--~~~v~~~~~~~~--g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 94 TQKTMGADPCYLTT-NGKNIVTANYS--GGSITVFPIGQD--GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp EEECSSSCEEEEEE-CSSEEEEEETT--TTEEEEEEBCTT--SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred EeccCCCCcEEEEE-CCCEEEEEECC--CCEEEEEEeCCC--CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 422 1111122223 77755555432 257888887521 11111110000 011124567778998
Q ss_pred EEEEcCcCCCceeEe-cCCCCCCCCCc-eeee---cccccccccccCCccc-eEEEeeCCc-EEEEE--cCceEEEeCCC
Q 041651 181 IIIIGGRRQFNYEFY-PKSDEDLSFPQ-TFML---HFLLETRDYAENNLYP-FVHLLPDGN-LFIFA--NTRSILFDYKQ 251 (557)
Q Consensus 181 vyvvGG~~~~~~E~y-P~~~~~~~~~~-w~~~---~~l~~t~d~~~~~~yp-~~~~~~~G~-ifv~g--g~~~~~yDp~t 251 (557)
+|+. +.....+.+| -....+....+ .... ... . ......| ++...+||+ +|+.. ++...+||..+
T Consensus 169 l~~~-~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~-~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 169 LLAD-DLGTDQIHKFNINPNANADNKEKFLTKGTPEAF-K----VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp EEEE-ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE-E----CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred EEEE-eCCCCEEEEEEEcCCCCcccccceeecccccce-e----cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 5554 4333455666 22100000000 1000 000 0 0011223 345567998 66665 24577899887
Q ss_pred CeEE
Q 041651 252 NKVL 255 (557)
Q Consensus 252 ~~W~ 255 (557)
++..
T Consensus 243 g~~~ 246 (361)
T 3scy_A 243 GMLD 246 (361)
T ss_dssp TEEE
T ss_pred CceE
Confidence 7653
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.3 Score=47.00 Aligned_cols=90 Identities=10% Similarity=0.079 Sum_probs=51.0
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||..+++.......+.....+.+..++|+.+++|+.+ ..+.+||... ......... +......-.....
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~--~~~~~~~~~-~~~~~~~i~~~~~- 112 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFA--TSGEDPLYT-LIGHQGNVCSLSF- 112 (313)
T ss_dssp EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTC--CTTSCC-CE-ECCCSSCEEEEEE-
T ss_pred cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeee--cCCCCcccc-hhhcccCEEEEEe-
Confidence 37889987776554433334444455677899999999873 4678887652 112222221 3222222233344
Q ss_pred CCcEEEEcCcCCCceeEe
Q 041651 178 DGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y 195 (557)
+++.+++|+.++ .+.+|
T Consensus 113 ~~~~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 113 QDGVVISGSWDK-TAKVW 129 (313)
T ss_dssp ETTEEEEEETTS-EEEEE
T ss_pred cCCEEEEEeCCC-CEEEE
Confidence 788888887654 34444
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.94 E-value=0.18 Score=59.52 Aligned_cols=252 Identities=8% Similarity=0.069 Sum_probs=125.3
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEec
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILP 177 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 177 (557)
+.+||..+++....-..+.....+.++.+||+.+++|+.+ ..+.+||.. +.+-... +. ......+++..+
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v~vwd~~---~~~~~~~---~~~~~~~v~~~~~~~ 709 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKVKIWDSA---TGKLVHT---YDEHSEQVNCCHFTN 709 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEEE---EECCSSCEEEEEECS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEECC---CCceEEE---EcCCCCcEEEEEEec
Confidence 7899998877543222333333345667899999999863 579999987 4432211 22 122233344444
Q ss_pred --CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCC
Q 041651 178 --DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQN 252 (557)
Q Consensus 178 --dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~ 252 (557)
++.+++.|+.++ .+.+| ... + ... ..+.... ..--.+...++|+.++.|+. ...+||..+.
T Consensus 710 ~~~~~~l~sg~~d~-~v~vwd~~~--~----~~~--~~~~~h~-----~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 710 KSNHLLLATGSNDF-FLKLWDLNQ--K----ECR--NTMFGHT-----NSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SSSCCEEEEEETTS-CEEEEETTS--S----SEE--EEECCCS-----SCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCCceEEEEEeCCC-eEEEEECCC--c----chh--heecCCC-----CCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 445666666543 45566 321 1 111 0010100 00113345679998888875 4678998877
Q ss_pred eEEEEecCCCC--C--C-CCccC-CCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecC
Q 041651 253 KVLKEYPEIPG--A--D-PRNYP-STGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSH 326 (557)
Q Consensus 253 ~W~~~~p~lp~--~--~-~r~~~-~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~ 326 (557)
+-...+..... . . ..... ........ .+++.+++++.. .+..+|+..
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----------~dg~~l~~~~~~-----------------~v~~~d~~~ 828 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWS----------ADGDKIIVAAKN-----------------KVLLFDIHT 828 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBC----------TTSSEEEEEETT-----------------EEEEEETTT
T ss_pred cccceecccccccccCCccccccceEEEEEEC----------CCCCEEEEEcCC-----------------cEEEEEecC
Confidence 65433311000 0 0 00000 00011111 156666666522 122233322
Q ss_pred CCCcceee-c-CCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccccccc
Q 041651 327 ANPSWVME-E-MPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSS 404 (557)
Q Consensus 327 ~~~~W~~~-~-M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~ 404 (557)
. ..... . -...... +....|+|+++++|+.+ | .+.+||..+. +-...-....... ..
T Consensus 829 ~--~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d-g------------~v~vwd~~~~---~~~~~~~~h~~~v--~~ 887 (1249)
T 3sfz_A 829 S--GLLAEIHTGHHSTIQ-YCDFSPYDHLAVIALSQ-Y------------CVELWNIDSR---LKVADCRGHLSWV--HG 887 (1249)
T ss_dssp C--CEEEEEECSSSSCCC-EEEECSSTTEEEEECSS-S------------CEEEEETTTT---EEEEEECCCSSCE--EE
T ss_pred C--CceeEEcCCCCCceE-EEEEcCCCCEEEEEeCC-C------------eEEEEEcCCC---ceeeecCCCccce--EE
Confidence 1 11111 1 1122222 34567899999998764 2 5789998876 3322111111111 23
Q ss_pred ceeccCCcEEEecCCCC
Q 041651 405 AILLTDGRVLIGGSNPH 421 (557)
Q Consensus 405 a~llpdG~V~v~GG~~~ 421 (557)
....|||+.+++|+.+.
T Consensus 888 v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp EEECTTSSEEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC
Confidence 45678999999988754
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.93 E-value=0.18 Score=49.16 Aligned_cols=89 Identities=11% Similarity=0.158 Sum_probs=49.3
Q ss_pred EEEEECCCCcEEECccC--CCcccccCeecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceE
Q 041651 99 SILYDVATNAYRPLMVQ--TDTWCSSGSVLP--NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATN 173 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~ 173 (557)
+.+||..+++.+.+... +.....+.+..+ +|+++++|+.+ ..+++||.. +.+|..+.. +. ....-.++
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D---~~v~iWd~~---~~~~~~~~~-~~~h~~~v~~v 105 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVMIWKEE---NGRWSQIAV-HAVHSASVNSV 105 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---TEEEEEEBS---SSCBCCCEE-ECCCSSCEEEE
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC---CEEEEEEcC---CCceEEEEE-eecCCCceeEE
Confidence 77888875543332221 221111122223 48999999873 689999988 666654432 22 12222334
Q ss_pred EEecC--CcEEEEcCcCCCceeEe
Q 041651 174 QILPD--GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 174 ~~L~d--G~vyvvGG~~~~~~E~y 195 (557)
+..++ |++++.|+.++ .+.+|
T Consensus 106 ~~~p~~~g~~l~s~s~d~-~v~~w 128 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDG-KVSVV 128 (297)
T ss_dssp EECCGGGCSEEEEEETTS-EEEEE
T ss_pred EeCcCCCCcEEEEEECCC-cEEEE
Confidence 44444 78888887654 44555
No 78
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.91 E-value=0.39 Score=47.69 Aligned_cols=148 Identities=11% Similarity=0.058 Sum_probs=78.6
Q ss_pred eEEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC--ceecCCccc-----ccccC
Q 041651 98 HSILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQC--DWIELPQHL-----SERRW 169 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~--~W~~~~~~m-----~~~R~ 169 (557)
.+.+||+.+++....... .-....+.++.++|++|++... ...+.+||+. .. .-..+.... ...-.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH---SKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT---CSSCCSEEESBTTBCCCSTTCCS
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC---CCeEEEEEecccCCCCCCccccC
Confidence 588999998887543221 1112334566789999998754 3579999986 32 111111000 01111
Q ss_pred cc-eEEEec-CCcEEEEcCcCCCceeEecCCCCCCCCCcee-eecccccccc-c-ccCCccceEEEe-eC-CcEEEEEc-
Q 041651 170 YA-TNQILP-DGRIIIIGGRRQFNYEFYPKSDEDLSFPQTF-MLHFLLETRD-Y-AENNLYPFVHLL-PD-GNLFIFAN- 241 (557)
Q Consensus 170 y~-s~~~L~-dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~-~~~~l~~t~d-~-~~~~~yp~~~~~-~~-G~ifv~gg- 241 (557)
.+ ++++-+ +|++||..+.....+..|.. .+ ... .+... ...+ . ...-.+|....+ ++ |+||+...
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~--~g----~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSP--SG----KFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECT--TS----CEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcC--CC----CEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 23 355555 79999998643344555622 11 111 11100 0000 0 001124555443 56 89999863
Q ss_pred -CceEEEeCCCCeEEEEe
Q 041651 242 -TRSILFDYKQNKVLKEY 258 (557)
Q Consensus 242 -~~~~~yDp~t~~W~~~~ 258 (557)
....+||+.+++....+
T Consensus 217 ~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCcEEEEE
Confidence 45789999977776544
No 79
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.91 E-value=0.22 Score=53.02 Aligned_cols=243 Identities=12% Similarity=0.147 Sum_probs=121.2
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||........+.. +.....+.++.+||+.+++|+.+ ..+++||.. ...-..+.. ....-.+++..+
T Consensus 285 ~i~~w~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~---~~~~~~~~~---~~~~v~~~~~s~ 354 (577)
T 2ymu_A 285 TVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQHLQTLTG---HSSSVWGVAFSP 354 (577)
T ss_dssp CEEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETT---SCEEEEECC---CSSCEEEEEECT
T ss_pred EEEEEeCCCcEEEEEec-CCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCeeEEEeC---CCCCEEEEEECC
Confidence 36778876544444432 22222234566899999998863 468889876 332222211 111223456667
Q ss_pred CCcEEEEcCcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCeEE
Q 041651 178 DGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNKVL 255 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~W~ 255 (557)
||+.++.|+.++ .+.+|... + .....+ .... ..--.+...+||+.++.|+.+ ..+||..... .
T Consensus 355 ~g~~l~~~~~dg-~v~~~~~~--~---~~~~~~---~~~~-----~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~-~ 419 (577)
T 2ymu_A 355 DGQTIASASDDK-TVKLWNRN--G---QLLQTL---TGHS-----SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-L 419 (577)
T ss_dssp TSSEEEEEETTS-EEEEEETT--C---CEEEEE---ECCS-----SCEEEEEECTTSSCEEEEETTSEEEEECTTCCE-E
T ss_pred CCCEEEEEeCCC-EEEEEcCC--C---CEEEEe---cCCC-----CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE-E
Confidence 999999887653 45556321 0 011111 1100 000123446799988888754 5678854433 2
Q ss_pred EEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeec
Q 041651 256 KEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEE 335 (557)
Q Consensus 256 ~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~ 335 (557)
+.+. ....... .....| +++.+++|+.+. .+..+|... ..-....
T Consensus 420 ~~~~---~~~~~v~----~~~~s~----------d~~~l~~~~~d~----------------~v~~w~~~~--~~~~~~~ 464 (577)
T 2ymu_A 420 QTLT---GHSSSVW----GVAFSP----------DDQTIASASDDK----------------TVKLWNRNG--QLLQTLT 464 (577)
T ss_dssp EEEE---CCSSCEE----EEEECT----------TSSEEEEEETTS----------------EEEEEETTS--CEEEEEE
T ss_pred EEec---CCCCCeE----EEEECC----------CCCEEEEEcCCC----------------EEEEEECCC--CEEEEEc
Confidence 2232 1100110 112222 677778777542 122233211 0111111
Q ss_pred CCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEE
Q 041651 336 MPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLI 415 (557)
Q Consensus 336 M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v 415 (557)
-..... .++...|||+++++++.+ + .+.+||.... .-..+.. ..... ......|||+.++
T Consensus 465 ~~~~~v-~~~~~spd~~~las~~~d-~------------~i~iw~~~~~---~~~~~~~-h~~~v--~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 465 GHSSSV-RGVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTG-HSSSV--RGVAFSPDGQTIA 524 (577)
T ss_dssp CCSSCE-EEEEECTTSCEEEEEETT-S------------EEEEEETTSC---EEEEEEC-CSSCE--EEEEECTTSSCEE
T ss_pred CCCCCE-EEEEEcCCCCEEEEEeCC-C------------EEEEEcCCCC---EEEEEeC-CCCCE--EEEEEcCCCCEEE
Confidence 112222 234567999999998754 1 5789996433 3333221 11111 1234579999999
Q ss_pred ecCCC
Q 041651 416 GGSNP 420 (557)
Q Consensus 416 ~GG~~ 420 (557)
+|+.+
T Consensus 525 s~~~d 529 (577)
T 2ymu_A 525 SASDD 529 (577)
T ss_dssp EEETT
T ss_pred EEECc
Confidence 98864
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.013 Score=66.13 Aligned_cols=89 Identities=11% Similarity=0.165 Sum_probs=54.1
Q ss_pred EEEEECCCCcEEECccC--CCcccccCeecCC--CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceE
Q 041651 99 SILYDVATNAYRPLMVQ--TDTWCSSGSVLPN--GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATN 173 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~d--G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~ 173 (557)
+.+||..++++..+... +.....+....++ |..+++|+.+ ..+.+||.. +.+|..... +. ....-.++
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~---~~~~~~~~~-~~~h~~~V~~v 105 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE---NGRWSQIAV-HAVHSASVNSV 105 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE---TTEEEEEEE-ECCCSSCEEEE
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC---CCccccccc-ccCCCCCeEEE
Confidence 77899887777665432 2222223344455 8999999873 578999988 666654432 32 22333444
Q ss_pred EEecC--CcEEEEcCcCCCceeEe
Q 041651 174 QILPD--GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 174 ~~L~d--G~vyvvGG~~~~~~E~y 195 (557)
+..++ |+++++|+.++ .+.+|
T Consensus 106 ~~sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp EECCGGGCSEEEEEETTS-EEEEE
T ss_pred EECCCCCCCEEEEEeCCC-cEEEE
Confidence 55566 88888887654 34444
No 81
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.90 E-value=0.1 Score=57.71 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=33.1
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..+++-...-..+.....+.+..++|+.+++|+.+ ..+++||..
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~ 502 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTL 502 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECC
Confidence 47899988876543322333333344566799999998863 578999875
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.07 Score=53.93 Aligned_cols=134 Identities=13% Similarity=0.038 Sum_probs=66.3
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc-----------
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER----------- 167 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~----------- 167 (557)
+.+||........+. .+.....+....++|+.+++|+.. ..+.+||.. +.+....-. ....
T Consensus 132 i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~---~~~~~~~~~-~~~~~~~~~~~~~~~ 203 (425)
T 1r5m_A 132 LRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVI---SGTVMQHFE-LKETGGSSINAENHS 203 (425)
T ss_dssp EEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETT---CCEEEEETT---TTEEEEEEC-CC-------------
T ss_pred EEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEecC---CeEEEEECC---CCcEEEEee-ccccCccceeecccc
Confidence 678885444344333 222223345566799999888763 468888886 333221100 1110
Q ss_pred ---cCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-
Q 041651 168 ---RWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT- 242 (557)
Q Consensus 168 ---R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~- 242 (557)
....+++..+++ .+++|+.++ .+.+| ... + ..-..+. ... ..--.+...++|+.++.++.
T Consensus 204 ~~~~~~~~~~~~~~~-~~~~~~~~g-~i~~~d~~~--~---~~~~~~~---~~~-----~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 204 GDGSLGVDVEWVDDD-KFVIPGPKG-AIFVYQITE--K---TPTGKLI---GHH-----GPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp --CCCBSCCEEEETT-EEEEECGGG-CEEEEETTC--S---SCSEEEC---CCS-----SCEEEEEEETTTTEEEEEETT
T ss_pred CCcceeeEEEEcCCC-EEEEEcCCC-eEEEEEcCC--C---ceeeeec---cCC-----CceEEEEECCCCCEEEEEcCC
Confidence 112334445454 466676654 34555 321 0 0000110 000 00112344578988888774
Q ss_pred -ceEEEeCCCCeEE
Q 041651 243 -RSILFDYKQNKVL 255 (557)
Q Consensus 243 -~~~~yDp~t~~W~ 255 (557)
...+||..+.+..
T Consensus 269 ~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQ 282 (425)
T ss_dssp SCEEEECSSSBSCS
T ss_pred CEEEEEECCCCccc
Confidence 4678998776543
No 83
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.89 E-value=0.057 Score=53.06 Aligned_cols=225 Identities=12% Similarity=0.152 Sum_probs=114.2
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDE 200 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~ 200 (557)
.++-+||.++++|+.+ ..+++||.. +.+-.. . +.. ...-.+++..++|+.++.|+.+. ++.+| ...
T Consensus 19 ~~fsp~~~~l~s~~~d---g~v~lWd~~---~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~s~s~d~-~i~vwd~~~-- 86 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYS---GRVELWNYE---TQVEVR--S-IQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNT-- 86 (304)
T ss_dssp EEECSSSSEEEEEETT---SEEEEEETT---TTEEEE--E-EECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTT--
T ss_pred EEECCCCCEEEEEcCC---CcEEEEECC---CCceeE--E-eeccCCcEEEEEEeCCCCEEEEECCCC-EEEEEECCC--
Confidence 3455799999999863 579999987 443211 1 221 12223455667899999888654 45666 331
Q ss_pred CCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEee
Q 041651 201 DLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLL 278 (557)
Q Consensus 201 ~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vll 278 (557)
+ ..-..+ ....+ .--.+...+++++++.|+. ...+||..++.-.... +.+. ...- -.....
T Consensus 87 ~---~~~~~~---~~h~~-----~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~--~~~h--~~~v--~~v~~~ 149 (304)
T 2ynn_A 87 G---EKVVDF---EAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT--FEGH--EHFV--MCVAFN 149 (304)
T ss_dssp C---CEEEEE---ECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE--ECCC--CSCE--EEEEEC
T ss_pred C---cEEEEE---eCCCC-----cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh--hccc--CCcE--EEEEEC
Confidence 1 111111 11000 0112345578998888875 4678998776322111 1211 1100 011221
Q ss_pred cCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEE--cCCCeEEEE
Q 041651 279 PLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMIL--LPNGDVIII 356 (557)
Q Consensus 279 p~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~--lpdG~I~vv 356 (557)
|. ++++++.|+.+. ++..+|+.......... ....+....... .+++++++.
T Consensus 150 p~---------~~~~l~sgs~D~----------------~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s 203 (304)
T 2ynn_A 150 PK---------DPSTFASGCLDR----------------TVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMIT 203 (304)
T ss_dssp TT---------CTTEEEEEETTS----------------EEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEE
T ss_pred CC---------CCCEEEEEeCCC----------------eEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEE
Confidence 21 457788888652 22333332211111111 111111111112 358888998
Q ss_pred cCcCCCCCCcccCCCCccccEEEcCCCCCCCceE-ecCCCCCcccccccceeccCCcEEEecCCCC
Q 041651 357 NGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS-VMEPSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 357 GG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~-~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
|+.+ + ++.+||..+. +-. .+.. .... -..+...|+++++++|+.+.
T Consensus 204 ~s~D-~------------~i~iWd~~~~---~~~~~~~~-h~~~--v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 204 ASDD-L------------TIKIWDYQTK---SCVATLEG-HMSN--VSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp EETT-S------------EEEEEETTTT---EEEEEEEC-CSSC--EEEEEECSSSSEEEEEETTS
T ss_pred EcCC-C------------eEEEEeCCCC---ccceeeCC-CCCC--EEEEEECCCCCEEEEEcCCC
Confidence 8754 2 6899998876 422 2211 1111 12345679999999998753
No 84
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.87 E-value=0.23 Score=49.58 Aligned_cols=216 Identities=7% Similarity=-0.035 Sum_probs=108.0
Q ss_pred CCeEEEEcCCCCCCCceecCC----cccccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCce-eeecccc
Q 041651 141 DHVVRTFTPCDDDQCDWIELP----QHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQT-FMLHFLL 214 (557)
Q Consensus 141 ~~~v~~ydp~~~~t~~W~~~~----~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w-~~~~~l~ 214 (557)
..++.+||+. +.++...- +....+..-...+ +.++++|++... ...+.++ +.+ + +. ..++.
T Consensus 16 ~~~l~~~d~~---t~~~~~~i~~~~n~~~lg~~~~~i~-~~~~~lyv~~~~-~~~v~viD~~t--~----~~~~~i~~-- 82 (328)
T 3dsm_A 16 NATLSYYDPA---TCEVENEVFYRANGFKLGDVAQSMV-IRDGIGWIVVNN-SHVIFAIDINT--F----KEVGRITG-- 82 (328)
T ss_dssp CBEEEEEETT---TTEEECSHHHHHHSSCCBSCEEEEE-EETTEEEEEEGG-GTEEEEEETTT--C----CEEEEEEC--
T ss_pred CceEEEEECC---CCEEhhhhHhhhcCcccCccceEEE-EECCEEEEEEcC-CCEEEEEECcc--c----EEEEEcCC--
Confidence 4689999999 66664311 0011222223343 458899998653 3456666 542 1 11 11211
Q ss_pred cccccccCCccceEEEe-eCCcEEEEE--cCceEEEeCCCCeEEEEecCCCCCCCC-ccCCCCceEeecCcCCCCCcccc
Q 041651 215 ETRDYAENNLYPFVHLL-PDGNLFIFA--NTRSILFDYKQNKVLKEYPEIPGADPR-NYPSTGSSVLLPLDERNGSTSVQ 290 (557)
Q Consensus 215 ~t~d~~~~~~yp~~~~~-~~G~ifv~g--g~~~~~yDp~t~~W~~~~p~lp~~~~r-~~~~~g~~vllp~~~~~~~~~~~ 290 (557)
...|+..+. ++|++|+.. +....++|+++++....++ +.....+ ..+ .+.++ . +
T Consensus 83 --------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p-~~i~~--~----------~ 140 (328)
T 3dsm_A 83 --------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE-CPDMDMESGST-EQMVQ--Y----------G 140 (328)
T ss_dssp --------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE-CTTCCTTTCBC-CCEEE--E----------T
T ss_pred --------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE-cCCccccCCCc-ceEEE--E----------C
Confidence 123555555 899999987 4567899999998764443 1110000 122 13332 1 7
Q ss_pred cEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cC-CCCceeeeEEEcCCCeEEEEcCcCCCCCCccc
Q 041651 291 AEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EM-PLPRVMGDMILLPNGDVIIINGAQLGTAGWEL 368 (557)
Q Consensus 291 g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~ 368 (557)
+++|++.-.. .+.+.+||+.. .+.... +. ..+ .+.+.-+||++|++.-.......|..
T Consensus 141 ~~lyv~~~~~---------------~~~v~viD~~t--~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 141 KYVYVNCWSY---------------QNRILKIDTET--DKVVDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TEEEEEECTT---------------CCEEEEEETTT--TEEEEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CEEEEEcCCC---------------CCEEEEEECCC--CeEEEEEEcCCCc---cceEEcCCCCEEEEECCCccCCcccc
Confidence 8999885210 13344555543 122211 11 122 23455689999998643211000100
Q ss_pred CCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCC-cEEEecC
Q 041651 369 ARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDG-RVLIGGS 418 (557)
Q Consensus 369 ~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG-~V~v~GG 418 (557)
....+.++|+++. +....-..+....-++ .++.||| ++|++.+
T Consensus 201 ---~~~~v~~id~~t~---~v~~~~~~~~g~~p~~-la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 201 ---EAPSLYRIDAETF---TVEKQFKFKLGDWPSE-VQLNGTRDTLYWINN 244 (328)
T ss_dssp ---CCCEEEEEETTTT---EEEEEEECCTTCCCEE-EEECTTSCEEEEESS
T ss_pred ---CCceEEEEECCCC---eEEEEEecCCCCCcee-EEEecCCCEEEEEcc
Confidence 0136899999988 6543212221111122 3445654 5666543
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.87 E-value=0.36 Score=47.43 Aligned_cols=87 Identities=9% Similarity=0.083 Sum_probs=50.5
Q ss_pred EEEEECCCCcEEE--CccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE-
Q 041651 99 SILYDVATNAYRP--LMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI- 175 (557)
Q Consensus 99 ~~~yDp~t~~w~~--l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~- 175 (557)
+.+||..++.... ....+.....+.+..++|+.+++|+.+ ..+.+||.. +.+.... ......-.+++.
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~---~~~~~~~---~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS---SNQAIQI---AQHDAPVKTIHWI 136 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEE---EECSSCEEEEEEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC---CCCceee---ccccCceEEEEEE
Confidence 7789987633222 111223333345566799999998863 579999987 5443322 112222223333
Q ss_pred -ecCCcEEEEcCcCCCceeEe
Q 041651 176 -LPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 176 -L~dG~vyvvGG~~~~~~E~y 195 (557)
-++|+.++.|+.++ .+.+|
T Consensus 137 ~~~~~~~l~~~~~dg-~i~vw 156 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDK-TLKFW 156 (368)
T ss_dssp ECSSCEEEEEEETTS-EEEEE
T ss_pred eCCCCCEEEEccCCC-cEEEE
Confidence 46888888888664 45556
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.23 Score=49.97 Aligned_cols=64 Identities=16% Similarity=0.031 Sum_probs=38.8
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
+.+..+||+++++|+.. ..+.+||.. ...-..+. .....-.+++..++|+.+++|+.++ .+.+|
T Consensus 113 ~~~~s~~~~~l~~~~~d---g~i~i~~~~---~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVEN---GELRLWNKT---GALLNVLN---FHRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EEEECTTSSEEEEEETT---SCEEEEETT---SCEEEEEC---CCCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEEEcCCCCEEEEEeCC---CeEEEEeCC---CCeeeecc---CCCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 44566799999999863 468899943 22222221 1222334556667899888887654 34444
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.82 E-value=0.26 Score=48.14 Aligned_cols=92 Identities=17% Similarity=0.102 Sum_probs=46.1
Q ss_pred EEEEECC--CCcEEECccCC-CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 99 SILYDVA--TNAYRPLMVQT-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
+.+||.. +++++.+.... .......++.+||+.+++++..+ ..+.+||..+ ......... +.....-.+++.
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~--~~~~~~~~~-~~~~~~~~~~~~ 136 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLED--GLPVGVVDV-VEGLDGCHSANI 136 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEET--TEEEEEEEE-ECCCTTBCCCEE
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCC--Ccccccccc-ccCCCCceEEEE
Confidence 6677765 77777654321 11223345667898665555422 5688888731 112222111 222222344556
Q ss_pred ecCCcEEEEcCcCCCceeEe
Q 041651 176 LPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y 195 (557)
-+||+.+++++.....+.+|
T Consensus 137 s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEE
Confidence 67887444444223345555
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.82 E-value=0.45 Score=49.15 Aligned_cols=215 Identities=7% Similarity=0.083 Sum_probs=107.2
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeec--CCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc-------------
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVL--PNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ------------- 162 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l--~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~------------- 162 (557)
.+.+||..+++-...-..+.....+..+. .++..+++|+.+ ..+.+||..+ .+-.....
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLPK---ESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECCC---CCCC------CCSSEEESCGG
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCCC---CcccccccccCCcceEeeccC
Confidence 47899998876543322222222122222 578899998863 5688888762 22110000
Q ss_pred ------ccccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCc
Q 041651 163 ------HLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN 235 (557)
Q Consensus 163 ------~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ 235 (557)
...........+.-++++.+++|+.++ .+.+| ... + +. ...+.... ..--.+...++|+
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~--~----~~--~~~~~~~~-----~~v~~~~~~~~~~ 323 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQ--M----KC--LYILSGHT-----DRIYSTIYDHERK 323 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTT--T----EE--EEEECCCS-----SCEEEEEEETTTT
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCC--C----cE--EEEecCCC-----CCEEEEEEcCCCC
Confidence 000111112223345788888888765 35555 221 0 11 11010000 0011234556888
Q ss_pred EEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCcccccccccccc
Q 041651 236 LFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFI 313 (557)
Q Consensus 236 ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~ 313 (557)
.++.|+. ...+||..+.+-...+ ... .. ....+. + .++.+++|+.+.
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~~~~~~---~~h--~~----~v~~~~------~----~~~~l~s~s~dg------------ 372 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGELMYTL---QGH--TA----LVGLLR------L----SDKFLVSAAADG------------ 372 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE---CCC--SS----CEEEEE------E----CSSEEEEEETTS------------
T ss_pred EEEEEeCCCcEEEEECCCCcEEEEE---eCC--CC----cEEEEE------E----cCCEEEEEeCCC------------
Confidence 8888875 4678999988765433 211 11 122221 1 567778777652
Q ss_pred ccCCceEEEEecCCCCcceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCC
Q 041651 314 RAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQ 384 (557)
Q Consensus 314 pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (557)
.+..+|+......+.. ...........-++|+++++|+ + | .+.+||..+.
T Consensus 373 ----~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 373 ----SIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp ----EEEEEETTTCCEEEEE---ECTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred ----cEEEEECCCCceeeee---cCCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 2233444321111211 1111122234557999999886 3 2 5799999887
No 89
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=1 Score=50.54 Aligned_cols=254 Identities=9% Similarity=-0.019 Sum_probs=125.4
Q ss_pred EEEEECCCCcEEECcc---CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcc-cccccCcceEE
Q 041651 99 SILYDVATNAYRPLMV---QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQH-LSERRWYATNQ 174 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~---~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~-m~~~R~y~s~~ 174 (557)
..+||+.+++++.... .......+.....+|+|++ |... ..+.+||+. +.++...... +.. ..-.+.+
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~---~~~~~~~~~~~~~~-~~v~~i~ 456 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR---LKKFQIIELEKNEL-LDVRVFY 456 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS---SCEEEECCSTTTCC-CCEEEEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC---CCcEEEeccCCCCC-CeEEEEE
Confidence 5678888877765521 1111122233345788887 3321 357889998 7777765421 221 2223344
Q ss_pred EecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc-CceEEEeCCCC
Q 041651 175 ILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN-TRSILFDYKQN 252 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg-~~~~~yDp~t~ 252 (557)
.-.+|++++... ...-.| +.. .++........ .....+.--....-.+|+|++... ....+||++++
T Consensus 457 ~d~~g~lwigt~---~Gl~~~~~~~------~~~~~~~~~~~--~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 457 EDKNKKIWIGTH---AGVFVIDLAS------KKVIHHYDTSN--SQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp ECTTSEEEEEET---TEEEEEESSS------SSCCEEECTTT--SSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred ECCCCCEEEEEC---CceEEEeCCC------CeEEecccCcc--cccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 445688887432 223445 542 13322211100 000001111223345788988764 56788999999
Q ss_pred eEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcce
Q 041651 253 KVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWV 332 (557)
Q Consensus 253 ~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~ 332 (557)
++.. +.. +...+.. ....++. + .+|+|++... . +- ...|++.......|+..+
T Consensus 526 ~~~~-~~~-~~~l~~~----~i~~i~~---d-----~~g~lWi~T~-~-Gl-----v~~~d~~~~~~~~~~~~~------ 578 (781)
T 3v9f_A 526 LVRK-FNQ-YEGFCSN----TINQIYR---S-----SKGQMWLATG-E-GL-----VCFPSARNFDYQVFQRKE------ 578 (781)
T ss_dssp EEEE-ECT-TTTCSCS----CEEEEEE---C-----TTSCEEEEET-T-EE-----EEESCTTTCCCEEECGGG------
T ss_pred eEEE-ccC-CCCCCCC----eeEEEEE---C-----CCCCEEEEEC-C-Cc-----eEEECCCCCcEEEccccC------
Confidence 8873 532 1110111 1112211 0 1677777543 1 21 023445444333332111
Q ss_pred eecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecC---CCCCcccccccceecc
Q 041651 333 MEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVME---PSTRPRMYHSSAILLT 409 (557)
Q Consensus 333 ~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~---~~~~~R~yhs~a~llp 409 (557)
.++..... +.+.-.+|+|++.+. . | +.+|||++. +++... .++.......+++..+
T Consensus 579 --gl~~~~i~-~i~~d~~g~lW~~t~-~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~ 637 (781)
T 3v9f_A 579 --GLPNTHIR-AISEDKNGNIWASTN-T-G-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDH 637 (781)
T ss_dssp --TCSCCCCC-EEEECSSSCEEEECS-S-C-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECT
T ss_pred --CCCCceEE-EEEECCCCCEEEEcC-C-c-------------eEEEECCCC---ceEEecccCCccccccccCceEECC
Confidence 34443333 334456799988642 1 2 478999988 776542 2333332223456678
Q ss_pred CCcEEEecCC
Q 041651 410 DGRVLIGGSN 419 (557)
Q Consensus 410 dG~V~v~GG~ 419 (557)
||++|++|.+
T Consensus 638 ~G~l~~g~~~ 647 (781)
T 3v9f_A 638 NGLIYFGSIN 647 (781)
T ss_dssp TSCEEEEETT
T ss_pred CCEEEEECCC
Confidence 9999997764
No 90
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.77 E-value=0.22 Score=54.29 Aligned_cols=220 Identities=12% Similarity=0.083 Sum_probs=108.8
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEec
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILP 177 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 177 (557)
+.+||+.+.+-...-..+...-.+.++-+||+++++|+.+ ..+++||.. +.+...... +. ....-.+++.-+
T Consensus 41 v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d---~~v~lWd~~---~~~~~~~~~-~~~~~~~v~~v~fs~ 113 (611)
T 1nr0_A 41 VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH---GNVRIWDTT---QTTHILKTT-IPVFSGPVKDISWDS 113 (611)
T ss_dssp EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEESS---STTCCEEEE-EECSSSCEEEEEECT
T ss_pred EEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC---CCEEEeECC---CCcceeeEe-ecccCCceEEEEECC
Confidence 6678876544222112222222334566899999999873 579999986 322211111 11 122334566677
Q ss_pred CCcEEEEcCcCCC---ceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCc-EEEEEcC--ceEEEeCCC
Q 041651 178 DGRIIIIGGRRQF---NYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN-LFIFANT--RSILFDYKQ 251 (557)
Q Consensus 178 dG~vyvvGG~~~~---~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~-ifv~gg~--~~~~yDp~t 251 (557)
||+.++.+|.+.. .+..|.. + . ....+....+ . --.+...|+++ .++.|+. ...+||..+
T Consensus 114 dg~~l~~~~~~~~~~~~v~~wd~---~----~--~~~~l~gh~~----~-v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~ 179 (611)
T 1nr0_A 114 ESKRIAAVGEGRERFGHVFLFDT---G----T--SNGNLTGQAR----A-MNSVDFKPSRPFRIISGSDDNTVAIFEGPP 179 (611)
T ss_dssp TSCEEEEEECCSSCSEEEEETTT---C----C--BCBCCCCCSS----C-EEEEEECSSSSCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEECCCCceeEEEEeeC---C----C--CcceecCCCC----C-ceEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence 9998888876432 2333311 0 0 0000111000 0 01223346775 5677764 467899877
Q ss_pred CeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcc
Q 041651 252 NKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSW 331 (557)
Q Consensus 252 ~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 331 (557)
.+....+ .+. ...- -....-| ++++++.|+.+.. ..+|+.....+.. ..
T Consensus 180 ~~~~~~l---~~H--~~~V--~~v~fsp----------dg~~las~s~D~~------i~lwd~~~g~~~~--------~~ 228 (611)
T 1nr0_A 180 FKFKSTF---GEH--TKFV--HSVRYNP----------DGSLFASTGGDGT------IVLYNGVDGTKTG--------VF 228 (611)
T ss_dssp BEEEEEE---CCC--SSCE--EEEEECT----------TSSEEEEEETTSC------EEEEETTTCCEEE--------EC
T ss_pred CeEeeee---ccc--cCce--EEEEECC----------CCCEEEEEECCCc------EEEEECCCCcEee--------ee
Confidence 6654333 221 1110 0122222 7888898886521 1123222211110 00
Q ss_pred eee---c-CCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCC
Q 041651 332 VME---E-MPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQ 384 (557)
Q Consensus 332 ~~~---~-M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (557)
... . -...... +...-|||+.++.|+.+ + ++.+||..+.
T Consensus 229 ~~~~~~~~~h~~~V~-~v~~spdg~~l~s~s~D-~------------~v~lWd~~~~ 271 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVF-GLTWSPDGTKIASASAD-K------------TIKIWNVATL 271 (611)
T ss_dssp BCTTSSSCSSSSCEE-EEEECTTSSEEEEEETT-S------------EEEEEETTTT
T ss_pred ccccccccccCCCEE-EEEECCCCCEEEEEeCC-C------------eEEEEeCCCC
Confidence 000 0 1122223 33456899999998865 1 6789999877
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.75 E-value=0.087 Score=62.34 Aligned_cols=246 Identities=11% Similarity=0.066 Sum_probs=124.6
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+||..+++.......+.....+.+..+||+.+++|+.+ ..+.+||.. +.+.... ........+++..++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~---~~~~~~~---~~~~~~v~~~~~~~~ 1055 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ---TGDYVFL---QAHQETVKDFRLLQD 1055 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT---TTEEECC---BCCSSCEEEEEECSS
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC---CCceEEE---ecCCCcEEEEEEcCC
Confidence 6789988776544333333333445667899999999863 579999988 5554432 122333344556666
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCeEE
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNKVL 255 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~W~ 255 (557)
+++ ++|+.+ ..+.+| ... + ..-..+. ... ..--.+...+||+.++.|+.+ ..+||..+.+-
T Consensus 1056 ~~l-~~~~~d-g~v~vwd~~~--~---~~~~~~~---~~~-----~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~- 1119 (1249)
T 3sfz_A 1056 SRL-LSWSFD-GTVKVWNVIT--G---RIERDFT---CHQ-----GTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP- 1119 (1249)
T ss_dssp SEE-EEEESS-SEEEEEETTT--T---CCCEEEE---CCS-----SCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC-
T ss_pred CcE-EEEECC-CcEEEEECCC--C---ceeEEEc---ccC-----CcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce-
Confidence 665 445544 345566 221 1 0101111 000 001134556799988888753 56888876652
Q ss_pred EEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCccee--
Q 041651 256 KEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVM-- 333 (557)
Q Consensus 256 ~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~-- 333 (557)
+..+... ...- .....-| +++++++|+.+. .+..+|+.......+.
T Consensus 1120 --~~~l~~h--~~~v--~~~~~s~----------dg~~lat~~~dg----------------~i~vwd~~~~~~~~~~~~ 1167 (1249)
T 3sfz_A 1120 --LHELKGH--NGCV--RCSAFSL----------DGILLATGDDNG----------------EIRIWNVSDGQLLHSCAP 1167 (1249)
T ss_dssp --SBCCCCC--SSCE--EEEEECS----------SSSEEEEEETTS----------------CCCEEESSSSCCCCCCCC
T ss_pred --eeeeccC--CCcE--EEEEECC----------CCCEEEEEeCCC----------------EEEEEECCCCceEEEecc
Confidence 2222211 0000 0112212 778888888652 1222333221111111
Q ss_pred ---e--cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceec
Q 041651 334 ---E--EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILL 408 (557)
Q Consensus 334 ---~--~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~ll 408 (557)
. .......-.+....|||+.++++| | .+.+||..+. +-...-....... ....+.
T Consensus 1168 ~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~~~~~~~~~~i--~~~~~s 1227 (1249)
T 3sfz_A 1168 ISVEEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSSQTFYTNGTNL--KKIHVS 1227 (1249)
T ss_dssp CC-------CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCCCCCCCSSCCC--CCCEEC
T ss_pred ccccccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---ceeeeeeccCCcc--cEEEEC
Confidence 0 011111122345578999999876 2 4689998776 4321111111111 234567
Q ss_pred cCCcEEEecCCCC
Q 041651 409 TDGRVLIGGSNPH 421 (557)
Q Consensus 409 pdG~V~v~GG~~~ 421 (557)
|||+.+++|+...
T Consensus 1228 ~dg~~l~~~~~dg 1240 (1249)
T 3sfz_A 1228 PDFRTYVTVDNLG 1240 (1249)
T ss_dssp SSSCCEEEECTTC
T ss_pred CCCCEEEEecCCc
Confidence 8999999888653
No 92
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.74 E-value=0.25 Score=48.84 Aligned_cols=50 Identities=20% Similarity=0.209 Sum_probs=33.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..+++-...-..+.....+..+.+++.++++|+.+ ..+++||..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~ 137 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK 137 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 47899998887543222233333344566789999999873 578899875
No 93
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.67 E-value=0.49 Score=45.60 Aligned_cols=132 Identities=11% Similarity=0.098 Sum_probs=69.0
Q ss_pred EEEEECCCCcEEECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
+.+||..|++...+-.. +.....+.+..++|+.+++|+.+ ..+++||.. +.+-... +....... .+.-
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~---~~~~~~~---~~~h~~~~-~~~~ 116 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKRLRN---MTSHSARV-GSLS 116 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEE---EECCSSCE-EEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC---CceeEEE---ecCccceE-EEee
Confidence 66777777766543322 22233345677899999999873 579999987 4432211 22111112 2233
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~ 253 (557)
.++++++.|+.+.. ...+ ... .......+.... .........++|+.++.++. ...+||..+.+
T Consensus 117 ~~~~~l~s~~~~~~-~~~~~~~~-------~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 117 WNSYILSSGSRSGH-IHHHDVRV-------AEHHVATLSGHS-----QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EETTEEEEEETTSE-EEEEETTS-------SSCEEEEEECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCCCEEEEEecCCc-eEeeecCC-------CceeEEEEcCcc-----CceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 36888888776542 2222 110 000110010100 01112344568888888775 36788987654
No 94
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.67 E-value=0.53 Score=45.75 Aligned_cols=139 Identities=21% Similarity=0.343 Sum_probs=77.2
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L 176 (557)
.+.+||..+++-...-..+.....+....+++.++++|+.+ ..+++||.. +.+-.. . +.. ...-.+++.-
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~~--~-~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVK---TGKCLK--T-LPAHSDPVSAVHFN 158 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT---TCCEEE--E-ECCCSSCEEEEEEC
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECC---CCEEEE--E-ecCCCCcEEEEEEc
Confidence 47889988876543222222222334566789999999873 579999987 433211 1 221 1222344555
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~ 253 (557)
++|+.++.|+.++ .+.+| ... + +. ...+.... ....-.+...++|+.++.++. ...+||..+.+
T Consensus 159 ~~~~~l~~~~~d~-~i~~wd~~~--~----~~--~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 159 RDGSLIVSSSYDG-LCRIWDTAS--G----QC--LKTLIDDD----NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp TTSSEEEEEETTS-CEEEEETTT--C----CE--EEEECCSS----CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CCCCEEEEEeCCC-cEEEEECCC--C----ce--eeEEeccC----CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 6899999888764 45566 321 0 11 10000000 000112345578998888864 46789999887
Q ss_pred EEEEe
Q 041651 254 VLKEY 258 (557)
Q Consensus 254 W~~~~ 258 (557)
-...+
T Consensus 226 ~~~~~ 230 (312)
T 4ery_A 226 CLKTY 230 (312)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55433
No 95
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.61 E-value=0.11 Score=56.15 Aligned_cols=87 Identities=8% Similarity=0.002 Sum_probs=54.3
Q ss_pred eEEEEECCCCcEEEC-ccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcC--CCCCCCceecCCcccccccCcceEE
Q 041651 98 HSILYDVATNAYRPL-MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTP--CDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l-~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp--~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
.+.+||..+++.... ..... .++.++.+||+.+.+++.. ..+.+||. . +.+- +.. +....+-.+++
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~---t~~~--~~~-i~~g~~p~~va 228 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRD---ARIDMIDLWAK---EPTK--VAE-IKIGIEARSVE 228 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETT---SEEEEEETTSS---SCEE--EEE-EECCSEEEEEE
T ss_pred eEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCC---CeEEEEECcCC---CCcE--EEE-EecCCCcceEE
Confidence 478899998876432 22222 3345577899888777653 68999999 5 3332 222 44444434555
Q ss_pred Eec----CCcEEEEcCcCCCceeEe
Q 041651 175 ILP----DGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 175 ~L~----dG~vyvvGG~~~~~~E~y 195 (557)
.-+ ||+.++++.....++.+|
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEE
Confidence 666 898877777655556566
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.61 E-value=0.63 Score=47.30 Aligned_cols=137 Identities=13% Similarity=0.121 Sum_probs=71.6
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||..+++....-..+.....+ +..++.++++|+.+ ..+.+||.. ...-. ... +. ....-.+++..
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d---g~i~i~d~~---~~~~~-~~~-~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGC--LSWNRHVLSSGSRS---GAIHHHDVR---IANHQ-IGT-LQGHSSEVCGLAWR 226 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEE--EEEETTEEEEEETT---SEEEEEETT---SSSCE-EEE-EECCSSCEEEEEEC
T ss_pred eEEEEECcCCeEEEEecCCCCceEE--EEECCCEEEEEcCC---CCEEEEecc---cCcce-eeE-EcCCCCCeeEEEEc
Confidence 4778998877654332222221111 22378899998863 579999987 22111 111 21 22223445566
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCC-cEEEEEc----CceEEEeCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDG-NLFIFAN----TRSILFDYK 250 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G-~ifv~gg----~~~~~yDp~ 250 (557)
++|+.+++|+.++ .+.+| ... + ..-..+. ... ..--.+...++| .+++.|+ ....+||..
T Consensus 227 ~~~~~l~s~~~d~-~v~iwd~~~--~---~~~~~~~---~~~-----~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 227 SDGLQLASGGNDN-VVQIWDARS--S---IPKFTKT---NHN-----AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp TTSSEEEEEETTS-CEEEEETTC--S---SEEEEEC---CCS-----SCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred CCCCEEEEEeCCC-eEEEccCCC--C---CccEEec---CCc-----ceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 7899999988764 45556 221 0 0000110 000 001123445554 5777764 346789998
Q ss_pred CCeEEEEe
Q 041651 251 QNKVLKEY 258 (557)
Q Consensus 251 t~~W~~~~ 258 (557)
+.+....+
T Consensus 293 ~~~~~~~~ 300 (401)
T 4aez_A 293 TGARVNTV 300 (401)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEE
Confidence 88765433
No 97
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.61 E-value=0.61 Score=45.74 Aligned_cols=123 Identities=11% Similarity=-0.028 Sum_probs=58.3
Q ss_pred eecCCCc-EEEEcCCCC---CCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCc-EEEEcCcCCCceeEe-cC
Q 041651 124 SVLPNGT-LVQSGGYND---GDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGR-IIIIGGRRQFNYEFY-PK 197 (557)
Q Consensus 124 ~~l~dG~-i~v~GG~~~---g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~ 197 (557)
++.+||+ +|+...... ....+.++|+. +.+-... ......-.+.+.-+||+ +|+.+..+ ..+.+| +.
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~---~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~ 119 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPV---TLEVTQA---IHNDLKPFGATINNTTQTLWFGNTVN-SAVTAIDAK 119 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTT---TCCEEEE---EEESSCCCSEEEETTTTEEEEEETTT-TEEEEEETT
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCC---CCeEEEE---EecCCCcceEEECCCCCEEEEEecCC-CEEEEEeCC
Confidence 4445664 444432211 13579999998 4443221 22222234566667887 66665533 355666 44
Q ss_pred CCCCCCCCceeeecccccccccccCCccce-EEEeeCCc-EEEEE-c--CceEEEeCCCCeEEEEe
Q 041651 198 SDEDLSFPQTFMLHFLLETRDYAENNLYPF-VHLLPDGN-LFIFA-N--TRSILFDYKQNKVLKEY 258 (557)
Q Consensus 198 ~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~-~~~~~~G~-ifv~g-g--~~~~~yDp~t~~W~~~~ 258 (557)
+ + ......+.-............|+ +...++|+ +|+.+ + ....+||+.+.+....+
T Consensus 120 ~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 120 T--G---EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp T--C---CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred C--C---eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 1 1 11111111000000000011233 34456877 66655 2 34788999998876544
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.59 E-value=0.21 Score=50.98 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=73.3
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||+.+++....-..+.....+.++.++|+.+++.+..+ ..+.+||.. +.+.... +.....-.+++.-+
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~---~~~~~~~---~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK---TKLEIRK---TDKIGLPRGLLLSK 263 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT---TTEEEEE---CCCCSEEEEEEECT
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC---CCcEEEE---ecCCCCceEEEEcC
Confidence 578999988765433222233333455667887664444322 579999997 5544322 22222233455567
Q ss_pred CCcEEEEcCcCC-------CceeEe-cCCCCCCCCCceeeecccccccccccCCccc-eEEEeeCCc-EEEEEc--CceE
Q 041651 178 DGRIIIIGGRRQ-------FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP-FVHLLPDGN-LFIFAN--TRSI 245 (557)
Q Consensus 178 dG~vyvvGG~~~-------~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp-~~~~~~~G~-ifv~gg--~~~~ 245 (557)
||+.+++++... ..+.+| +.. .+.. ..+... ..+ .+...++|+ +|+.+. ....
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~------~~~~--~~~~~~-------~~~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDK------EKLI--DTIGPP-------GNKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTT------TEEE--EEEEEE-------ECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCC------CcEE--eeccCC-------CCcceEEECCCCCEEEEEecCCCEEE
Confidence 887777776432 234455 331 1111 000000 011 234457885 777755 3477
Q ss_pred EEeCCCCeEEEEe
Q 041651 246 LFDYKQNKVLKEY 258 (557)
Q Consensus 246 ~yDp~t~~W~~~~ 258 (557)
+||..+.+....+
T Consensus 329 v~d~~~~~~~~~~ 341 (433)
T 3bws_A 329 VYDLKEKKVQKSI 341 (433)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCcEEEEe
Confidence 8999988765444
No 99
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.56 E-value=0.49 Score=48.55 Aligned_cols=87 Identities=20% Similarity=0.270 Sum_probs=53.0
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEec
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILP 177 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~ 177 (557)
+.+||..+.+-...-..+.....+..+.++|..+++|+.+ ..+.+||.. +..-.. . +. ...+..++..-+
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~---~~~~~~--~-~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQ---TGYCVK--T-FTGHREWVRMVRPNQ 244 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEECT
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECC---CCcEEE--E-EeCCCccEEEEEECC
Confidence 5678887765433222233333345667899999999863 689999987 443211 1 21 223444455667
Q ss_pred CCcEEEEcCcCCCceeEe
Q 041651 178 DGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y 195 (557)
||++++.|+.++ ++.+|
T Consensus 245 ~g~~l~s~s~D~-~v~vw 261 (410)
T 1vyh_C 245 DGTLIASCSNDQ-TVRVW 261 (410)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCEEEEEcCCC-eEEEE
Confidence 899999988764 34445
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.51 Score=47.57 Aligned_cols=58 Identities=7% Similarity=0.135 Sum_probs=36.0
Q ss_pred EEEcC-CCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCce-EecCCCCCcccccccceeccCC-cEEEecCCCC
Q 041651 345 MILLP-NGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRF-SVMEPSTRPRMYHSSAILLTDG-RVLIGGSNPH 421 (557)
Q Consensus 345 ~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-~~~~~~~~~R~yhs~a~llpdG-~V~v~GG~~~ 421 (557)
....| +++++++|+.+ | .+.+||..+. +- ..+... .... ......||| +++++|+.+.
T Consensus 268 ~~~s~~~~~~l~s~~~d-g------------~v~~wd~~~~---~~~~~~~~~-~~~v--~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRD-N------------TVLLWNPESA---EQLSQFPAR-GNWC--FKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp EEECSSCSSCEEEEESS-S------------EEEEECSSSC---CEEEEEECS-SSCC--CCEEECTTCTTEEEECCSSS
T ss_pred EEeCCCCCCeEEEEeCC-C------------CEEEeeCCCC---ccceeecCC-CCce--EEEEECCCCCCEEEEEecCC
Confidence 34456 89999998764 2 5789998776 32 222111 1111 234567898 8999998653
No 101
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.54 E-value=0.35 Score=47.55 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=53.3
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceec-CCcccc-cccCcceEE
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIE-LPQHLS-ERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~-~~~~m~-~~R~y~s~~ 174 (557)
.+.+||..+++-...-..+.....+....+ ++.++++|+.+ ..+.+||.. +.+-.. ... +. ....-.+++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~~-~~~~~~~v~~~~ 168 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ---TDTLVAIFGG-VEGHRDEVLSAD 168 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT---TTEEEEEECS-TTSCSSCEEEEE
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee---cCeEEEEecc-cccccCceeEEE
Confidence 377899887765432222333333455667 89999999863 579999987 443221 110 11 223334455
Q ss_pred EecCCcEEEEcCcCCCceeEe
Q 041651 175 ILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~~~E~y 195 (557)
..++|+.++.|+.++ .+.+|
T Consensus 169 ~~~~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 169 YDLLGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp ECTTSSEEEEEETTS-CEEEE
T ss_pred ECCCCCEEEEecCCC-CEEEE
Confidence 567899999988764 34444
No 102
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.53 E-value=0.56 Score=44.96 Aligned_cols=222 Identities=14% Similarity=0.192 Sum_probs=106.2
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccc--ccccCcceEEEe--cCCcEEEEcCcCCCceeEe-cC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHL--SERRWYATNQIL--PDGRIIIIGGRRQFNYEFY-PK 197 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m--~~~R~y~s~~~L--~dG~vyvvGG~~~~~~E~y-P~ 197 (557)
.++..+|++|+.... ...+.+||+. ..........- ...-..+...++ .+|++||.+......+..| +.
T Consensus 35 v~~~~~g~l~v~~~~---~~~i~~~d~~---g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 35 VAVNAQNDIIVADTN---NHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp EEECTTCCEEEEEGG---GTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred EEECCCCCEEEEECC---CCEEEEECCC---CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence 344568999998643 2578999987 33222221100 011123333334 5899999874322344455 32
Q ss_pred CCCCCCCCceeeecccccccccccCCccceE-EEeeCCcEEEEEc--CceEEEeCCCCeEEEEecCCCCCCCCccCCCCc
Q 041651 198 SDEDLSFPQTFMLHFLLETRDYAENNLYPFV-HLLPDGNLFIFAN--TRSILFDYKQNKVLKEYPEIPGADPRNYPSTGS 274 (557)
Q Consensus 198 ~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~~G~ifv~gg--~~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~ 274 (557)
+ ........ .....|.. .+.++|++|+... ....+||+...... .+.. +. .-..+ .
T Consensus 109 ---g---~~~~~~~~--------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~--~~~~p---~ 167 (286)
T 1q7f_A 109 ---G---QFVRKFGA--------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK--HLEFP---N 167 (286)
T ss_dssp ---S---CEEEEECT--------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT--TCSSE---E
T ss_pred ---C---cEEEEecC--------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC--ccCCc---E
Confidence 1 01111110 00123443 3456899998864 45778998765443 3321 11 11112 1
Q ss_pred eEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee---cCCCCceeeeEEEcCCC
Q 041651 275 SVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME---EMPLPRVMGDMILLPNG 351 (557)
Q Consensus 275 ~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~---~M~~~R~~~~~v~lpdG 351 (557)
.+.+. .+++||++...+ +.+.+||+.. ...++.. .+..++ +.++-++|
T Consensus 168 ~i~~~---------~~g~l~v~~~~~----------------~~i~~~~~~g-~~~~~~~~~g~~~~p~---~i~~d~~G 218 (286)
T 1q7f_A 168 GVVVN---------DKQEIFISDNRA----------------HCVKVFNYEG-QYLRQIGGEGITNYPI---GVGINSNG 218 (286)
T ss_dssp EEEEC---------SSSEEEEEEGGG----------------TEEEEEETTC-CEEEEESCTTTSCSEE---EEEECTTC
T ss_pred EEEEC---------CCCCEEEEECCC----------------CEEEEEcCCC-CEEEEEccCCccCCCc---EEEECCCC
Confidence 22211 168898875422 2233444321 0001111 122222 23455899
Q ss_pred eEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCC-CCCcccccccceeccCCcEEEec
Q 041651 352 DVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEP-STRPRMYHSSAILLTDGRVLIGG 417 (557)
Q Consensus 352 ~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~-~~~~R~yhs~a~llpdG~V~v~G 417 (557)
+|||...... ..+.+||+... ....+.. ....+ -++ .++.+||++|++.
T Consensus 219 ~l~v~~~~~~------------~~i~~~~~~g~---~~~~~~~~~~~~~-~~~-i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 219 EILIADNHNN------------FNLTIFTQDGQ---LISALESKVKHAQ-CFD-VALMDDGSVVLAS 268 (286)
T ss_dssp CEEEEECSSS------------CEEEEECTTSC---EEEEEEESSCCSC-EEE-EEEETTTEEEEEE
T ss_pred CEEEEeCCCC------------EEEEEECCCCC---EEEEEcccCCCCc-cee-EEECCCCcEEEEC
Confidence 9999874321 15789997654 3333221 11111 122 3456899999984
No 103
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.52 E-value=0.18 Score=50.79 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=33.8
Q ss_pred eEEEEECCCCcEEECc----cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLM----VQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~----~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..+++-.... ..+.....+.++.+||+.+++|+.+ ..+++||..
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~ 157 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA 157 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC
Confidence 3789998887632211 1233334445677899999999873 579999987
No 104
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.52 E-value=0.46 Score=47.63 Aligned_cols=149 Identities=10% Similarity=-0.004 Sum_probs=71.7
Q ss_pred EEEEECCCCc-------EEECccCCCcccccCeecCC----C---cEEEEcCCCCCCCeEEEEcCCCCCCCc------ee
Q 041651 99 SILYDVATNA-------YRPLMVQTDTWCSSGSVLPN----G---TLVQSGGYNDGDHVVRTFTPCDDDQCD------WI 158 (557)
Q Consensus 99 ~~~yDp~t~~-------w~~l~~~~~~~c~~~~~l~d----G---~i~v~GG~~~g~~~v~~ydp~~~~t~~------W~ 158 (557)
+.+||..+++ ...+. .+.....+....++ | +++++|+.+ ..+.+||.. +.+ +.
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~---~~~~~~~~~~~ 110 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRIT---REDETKKVIFE 110 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEE---ECTTTCCEEEE
T ss_pred EEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEcc---CCcccccccce
Confidence 6778877766 33332 12222233455567 8 899998863 468888876 333 44
Q ss_pred cCCccccc---ccCcceEEEe----cCCcE-EEEcCcCCCceeEe-cCCCC----CCCCCceeeecccccc--cccccCC
Q 041651 159 ELPQHLSE---RRWYATNQIL----PDGRI-IIIGGRRQFNYEFY-PKSDE----DLSFPQTFMLHFLLET--RDYAENN 223 (557)
Q Consensus 159 ~~~~~m~~---~R~y~s~~~L----~dG~v-yvvGG~~~~~~E~y-P~~~~----~~~~~~w~~~~~l~~t--~d~~~~~ 223 (557)
.+.. ... ...-.+++.. ++|+. +++|+.++ .+.+| ..... +. .-.|.....+... .......
T Consensus 111 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 187 (397)
T 1sq9_A 111 KLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWKFHPFADESNSL-TLNWSPTLELQGTVESPMTPSQ 187 (397)
T ss_dssp EECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEEEESSSSHHHHT-TTCCCCEEEEEEEECCSSSSCC
T ss_pred eecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEeCCccccccccc-eeeccCcceeeeeeccccCCCC
Confidence 4322 110 1333445555 68998 88887664 34455 22100 00 0011100001000 0000001
Q ss_pred ccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEe
Q 041651 224 LYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEY 258 (557)
Q Consensus 224 ~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~ 258 (557)
.-..+...++| +++.|+. ...+||..+.+....+
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 11234456788 7777764 4678999988765444
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.46 E-value=0.096 Score=52.09 Aligned_cols=57 Identities=19% Similarity=0.275 Sum_probs=32.1
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEecCCcEEEEcC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQILPDGRIIIIGG 186 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~vyvvGG 186 (557)
.++.+||+++++|+.. ..+++||.. +.+|..... +.. ...-.+++..++|+.+++|+
T Consensus 14 ~~~s~~~~~l~~~~~d---~~v~i~~~~---~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN---HEVHIYEKS---GNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp EEECTTSSEEEEECSS---SEEEEEEEE---TTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCC---CEEEEEeCC---CCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEc
Confidence 4455789999999763 579999987 555543322 321 11122333344555555544
No 106
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.45 E-value=0.19 Score=49.39 Aligned_cols=142 Identities=9% Similarity=0.138 Sum_probs=70.6
Q ss_pred eEEEEECCCCcEEECcc-CCCcccccCeecCC---CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccccc-Ccce
Q 041651 98 HSILYDVATNAYRPLMV-QTDTWCSSGSVLPN---GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERR-WYAT 172 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~d---G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R-~y~s 172 (557)
.+.+||..+++...... .+.....+.++.++ |.++++|+.+ ..+.+||.. +.+- ... .+.... .-.+
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~-~~~-~~~~~~~~v~~ 116 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE---APEM-PVY-SVKGHKEIINA 116 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT---SCSS-CSE-EECCCSSCEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC---CCCc-cEE-EEEecccceEE
Confidence 47899999888765432 22222233445556 7899998863 579999987 3320 010 011111 1111
Q ss_pred E------EEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEE---EeeCCcEEEEEcC
Q 041651 173 N------QILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVH---LLPDGNLFIFANT 242 (557)
Q Consensus 173 ~------~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~---~~~~G~ifv~gg~ 242 (557)
+ +.-++++.++.|+.++ .+.+| ....+ .....+...... .....+...+ ..++|++++.|+.
T Consensus 117 ~~~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~----~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~l~~~~~ 188 (357)
T 3i2n_A 117 IDGIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKD----DPVANMEPVQGE---NKRDCWTVAFGNAYNQEERVVCAGYD 188 (357)
T ss_dssp EEEESGGGCC-CCCEEEEEETTS-CEEEECTTSCS----SCSEEECCCTTS---CCCCEEEEEEECCCC-CCCEEEEEET
T ss_pred EeeccccccCCCccEEEEEeCCC-eEEEEeCCCCC----CcceeccccCCC---CCCceEEEEEEeccCCCCCEEEEEcc
Confidence 1 1125788888887654 45566 32100 011111110000 0000111111 2278999888875
Q ss_pred --ceEEEeCCCCeEE
Q 041651 243 --RSILFDYKQNKVL 255 (557)
Q Consensus 243 --~~~~yDp~t~~W~ 255 (557)
...+||..+.+-.
T Consensus 189 d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 189 NGDIKLFDLRNMALR 203 (357)
T ss_dssp TSEEEEEETTTTEEE
T ss_pred CCeEEEEECccCcee
Confidence 4678999888754
No 107
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.31 E-value=0.58 Score=44.10 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=52.7
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCC-CceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQ-CDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t-~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+.+||+.+++...+... .....+.+.-+||+.+++++. ..+.+||.. + .+...+.. ........+.+.-
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~---~~~~~~~~~~-~~~~~~~~~~~~s 93 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA---GDPSPEKVDT-GFATICNNDHGIS 93 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS---SCCSCEECCC-TTCCCBCSCCEEC
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC---CCCCceEecc-ccccccccceEEC
Confidence 578999999887765432 222334566789999998763 479999988 5 55444332 2212223445566
Q ss_pred cCCcEEEEcCcC
Q 041651 177 PDGRIIIIGGRR 188 (557)
Q Consensus 177 ~dG~vyvvGG~~ 188 (557)
+||+.+++++..
T Consensus 94 pdg~~l~~~~~~ 105 (297)
T 2ojh_A 94 PDGALYAISDKV 105 (297)
T ss_dssp TTSSEEEEEECT
T ss_pred CCCCEEEEEEeC
Confidence 799988887743
No 108
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.28 E-value=0.91 Score=44.10 Aligned_cols=83 Identities=14% Similarity=0.228 Sum_probs=46.5
Q ss_pred EEEEECCCCcE---EECcc--CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceE
Q 041651 99 SILYDVATNAY---RPLMV--QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATN 173 (557)
Q Consensus 99 ~~~yDp~t~~w---~~l~~--~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~ 173 (557)
+.+||..+.+. .+... .+.....+..+.+||+.+++|+.+ ..+.+++.. ........ ..........
T Consensus 63 i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d---~~i~~~~~~---~~~~~~~~--~~~~~~~~~~ 134 (340)
T 4aow_A 63 IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD---GTLRLWDLT---TGTTTRRF--VGHTKDVLSV 134 (340)
T ss_dssp EEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEE--ECCSSCEEEE
T ss_pred EEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc---ccceEEeec---ccceeeee--cCCCCceeEE
Confidence 77888765442 22221 122223344566899999999874 468888876 33322211 1122223334
Q ss_pred EEecCCcEEEEcCcCC
Q 041651 174 QILPDGRIIIIGGRRQ 189 (557)
Q Consensus 174 ~~L~dG~vyvvGG~~~ 189 (557)
...++++.++.|+.+.
T Consensus 135 ~~~~~~~~l~s~s~d~ 150 (340)
T 4aow_A 135 AFSSDNRQIVSGSRDK 150 (340)
T ss_dssp EECTTSSCEEEEETTS
T ss_pred EEeecCccceeecCCC
Confidence 4556788888887654
No 109
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.25 E-value=0.34 Score=48.81 Aligned_cols=126 Identities=11% Similarity=0.133 Sum_probs=62.4
Q ss_pred ccCeecCCCcEEEEcCCCCC---CCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe-c
Q 041651 121 SSGSVLPNGTLVQSGGYNDG---DHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-P 196 (557)
Q Consensus 121 ~~~~~l~dG~i~v~GG~~~g---~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P 196 (557)
.+.++-+||++++.|+.... ..++++|+..+. ..........+...-.-.+++..+|+++++. +.+ .++.+| .
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~-~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~-s~d-g~v~lWd~ 122 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEG-APNESLCTAGVQTEAGVTDVAWVSEKGILVA-SDS-GAVELWEI 122 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----CGGGCSEEEECSSCEEEEEEETTTEEEEE-ETT-SCEEEC--
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCC-CcceeEecccCCCCCCEEEEEEcCCCCEEEE-ECC-CEEEEeec
Confidence 34566789999999986321 236888886521 1112111111112222344566778887664 433 356666 3
Q ss_pred CCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeEEEEe
Q 041651 197 KSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKVLKEY 258 (557)
Q Consensus 197 ~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~ 258 (557)
.. + ..-.......... ...--.+...++|+.++.|+. ...+||..+++....+
T Consensus 123 ~~--~---~~~~~~~~~~~~h----~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 123 LE--K---ESLLVNKFAKYEH----DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp -----------CCCCEEECCC----SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cc--c---ceeEEEeeccCCC----CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 21 1 0000000000000 000112345679999998875 4788999998765433
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.23 E-value=0.16 Score=50.94 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=47.2
Q ss_pred EEEECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc----------ccc-cc
Q 041651 100 ILYDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ----------HLS-ER 167 (557)
Q Consensus 100 ~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~----------~m~-~~ 167 (557)
.+||..+++-..+...+.....+.++.+ +|+++++|+.+ ..+.+||.. +.+...... .+. ..
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~d---g~i~iw~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSD---GVIVLYDLE---NSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETT---SCEEEEECC---CCSSSSCEEECEEEEECTTCTTCCS
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCC---CeEEEEECC---CCcccceEeccccccccccccccCC
Confidence 3444444443333333433334455667 89999999863 469999987 332211100 000 22
Q ss_pred cCcceEEEec-CCcEEEEcCcCCCceeEe
Q 041651 168 RWYATNQILP-DGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 168 R~y~s~~~L~-dG~vyvvGG~~~~~~E~y 195 (557)
..-.+++..+ ++++++.|+.++ .+.+|
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~-~i~iw 127 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK-TLKVW 127 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS-EEEEE
T ss_pred CcEEEEEEccCCCcEEEEEeCCC-eEEEe
Confidence 2233444555 677888877654 44555
No 111
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.18 E-value=1.2 Score=44.43 Aligned_cols=239 Identities=11% Similarity=0.100 Sum_probs=115.3
Q ss_pred CcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccccc-CcceEEEecCCcEEEEc
Q 041651 107 NAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERR-WYATNQILPDGRIIIIG 185 (557)
Q Consensus 107 ~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~vyvvG 185 (557)
.+|+.+.........+..+..++.++++|-. + .+.+- .++ ..+|+.+......+. ...+++.- ++++|++|
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~--g--~i~~s--~Dg-G~tW~~~~~~~~~~~~~~~~i~~~-~~~~~~~g 96 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN--A--TLMET--RDG-GQTWEPRTLVLDHSDYRFNSVSFQ-GNEGWIVG 96 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT--T--EEEEE--SST-TSSCEECCCCCSCCCCEEEEEEEE-TTEEEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC--C--eEEEe--CCC-CCCCeECCCCCCCCCccEEEEEec-CCeEEEEE
Confidence 4677765433222223344456788887632 1 23322 211 468998753222222 23344443 67888875
Q ss_pred CcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceE-EEeCCCCeEEEEecCCCC
Q 041651 186 GRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSI-LFDYKQNKVLKEYPEIPG 263 (557)
Q Consensus 186 G~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~-~yDp~t~~W~~~~p~lp~ 263 (557)
- .. .+| ... . ..+|........ .+...+ ......++++|+.+..... +-+-...+|.+ +.. +.
T Consensus 97 ~-~g---~i~~S~D-g---G~tW~~~~~~~~----~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~-~~~-~~ 161 (327)
T 2xbg_A 97 E-PP---IMLHTTD-G---GQSWSQIPLDPK----LPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQA-LVQ-EA 161 (327)
T ss_dssp E-TT---EEEEESS-T---TSSCEECCCCTT----CSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEE-EEC-SC
T ss_pred C-CC---eEEEECC-C---CCCceECccccC----CCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEE-eec-CC
Confidence 2 21 244 321 1 346765432110 011112 2333467889988764322 22223568985 432 11
Q ss_pred CCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCC-CCcceeecCCCCcee
Q 041651 264 ADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHA-NPSWVMEEMPLPRVM 342 (557)
Q Consensus 264 ~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~-~~~W~~~~M~~~R~~ 342 (557)
..... ..+..+ +++++++|-.. .-+. -.+. ...|+....+..+..
T Consensus 162 --~~~~~---~~~~~~----------~~~~~~~g~~G-~~~~------------------S~d~gG~tW~~~~~~~~~~~ 207 (327)
T 2xbg_A 162 --IGVMR---NLNRSP----------SGEYVAVSSRG-SFYS------------------TWEPGQTAWEPHNRTTSRRL 207 (327)
T ss_dssp --CCCEE---EEEECT----------TSCEEEEETTS-SEEE------------------EECTTCSSCEEEECCSSSCE
T ss_pred --CcceE---EEEEcC----------CCcEEEEECCC-cEEE------------------EeCCCCCceeECCCCCCCcc
Confidence 11111 112212 56777766321 1110 0111 358988744445555
Q ss_pred eeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCC--CCCcccccccceeccCCcEEEecCC
Q 041651 343 GDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEP--STRPRMYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 343 ~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~--~~~~R~yhs~a~llpdG~V~v~GG~ 419 (557)
..++..++|++|+++.. | .+.+.+ ++.|++|+.+.. ++.....++.+ ..+++++|++|+.
T Consensus 208 ~~~~~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 208 HNMGFTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVWLAGGA 269 (327)
T ss_dssp EEEEECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEEEEEST
T ss_pred ceeEECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE-ecCCCEEEEEeCC
Confidence 66666789999988642 2 122222 234568987643 22222233333 4568999998874
No 112
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.16 E-value=0.28 Score=48.39 Aligned_cols=90 Identities=12% Similarity=0.126 Sum_probs=50.8
Q ss_pred eEEEEECCCCcEEECcc--CCCcccccCeecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcce
Q 041651 98 HSILYDVATNAYRPLMV--QTDTWCSSGSVLP--NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYAT 172 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s 172 (557)
.+.+||..+++...+.. .+.....+.+..+ +|.+++.|+.+ ..+++||.. +.+|..... +. ....-.+
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D---~~v~iWd~~---~~~~~~~~~-~~~h~~~V~~ 108 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD---RKVIIWREE---NGTWEKSHE-HAGHDSSVNS 108 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---SCEEEECCS---SSCCCEEEE-ECCCSSCCCE
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---CEEEEEECC---CCcceEEEE-ccCCCCceEE
Confidence 37789988775433322 1221111222322 48899999863 579999998 666644321 32 1222334
Q ss_pred EEEecC--CcEEEEcCcCCCceeEe
Q 041651 173 NQILPD--GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 173 ~~~L~d--G~vyvvGG~~~~~~E~y 195 (557)
++.-++ |++++.|+.++ ++.+|
T Consensus 109 v~~~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 109 VCWAPHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp EEECCTTTCSCEEEECSSS-CEEEE
T ss_pred EEECCCCCCcEEEEEcCCC-CEEEE
Confidence 555555 78888888765 34455
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.11 E-value=1 Score=43.88 Aligned_cols=141 Identities=16% Similarity=0.106 Sum_probs=73.3
Q ss_pred eEEEEECCCCcEEECccCCCc-ccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-----ccCc
Q 041651 98 HSILYDVATNAYRPLMVQTDT-WCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-----RRWY 170 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~-~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-----~R~y 170 (557)
.+.+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+-...-. +.. ...-
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~---t~~~~~~~~-~~~~~~~~~~~~ 94 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD---TCKNTFHAN-LSSVPGEVGRSM 94 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT---TTEEEEEEE-SCCSTTEEEECS
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC---CCcEEEEEE-cccccccccccc
Confidence 378899988876533222221 223345667887 5566532 2579999998 544322111 111 1222
Q ss_pred ceEEEecCCcEEEEcCcC-----------CCceeEe-cCCCCCCCCCceeeecccccccccccCCccc-eEEEeeCCcEE
Q 041651 171 ATNQILPDGRIIIIGGRR-----------QFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP-FVHLLPDGNLF 237 (557)
Q Consensus 171 ~s~~~L~dG~vyvvGG~~-----------~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp-~~~~~~~G~if 237 (557)
.+.+.-+||+.+++++.+ ...+.+| ..+ + ..-....... ....+ .+...+||++|
T Consensus 95 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~---~~~~~~~~~~-------~~~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 95 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD--G---LEAKPVRTFP-------MPRQVYLMRAADDGSLY 162 (349)
T ss_dssp SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG--G---GGBCCSEEEE-------CCSSCCCEEECTTSCEE
T ss_pred cceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC--c---cccceeeecc-------CCCcccceeECCCCcEE
Confidence 345666799877776643 2344445 321 0 0000000000 00112 23356899977
Q ss_pred EEEcCceEEEeCCCCeEEEEe
Q 041651 238 IFANTRSILFDYKQNKVLKEY 258 (557)
Q Consensus 238 v~gg~~~~~yDp~t~~W~~~~ 258 (557)
+ ++.+..+||.++.+....+
T Consensus 163 ~-~~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 163 V-AGPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp E-ESSSEEEECTTTCCEEEEE
T ss_pred E-ccCcEEEEeCCCCceeccc
Confidence 6 5666889999988766444
No 114
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.09 E-value=1 Score=42.88 Aligned_cols=174 Identities=9% Similarity=0.003 Sum_probs=88.5
Q ss_pred CCCCCCCCCCceEEccCC-cccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCC
Q 041651 29 VLPPYAGSQGEWNLLHES-IGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATN 107 (557)
Q Consensus 29 ~~~~~~~~~g~W~~~~~~-~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~ 107 (557)
.+-.+++. +++...... ........++-++|++|+..... + .+..||+. +
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~----------~-----------------~i~~~~~~-g 87 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA----------N-----------------KIGRITKK-G 87 (299)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT----------T-----------------EEEEECTT-S
T ss_pred cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC----------C-----------------eEEEECCC-C
Confidence 35556666 776654311 12223333444688888764321 1 25677775 4
Q ss_pred cEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEc
Q 041651 108 AYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIG 185 (557)
Q Consensus 108 ~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvG 185 (557)
+++..... ......+.++..+|++|+.... ...+.+||+. . +..... ++ ....-.+.+.-++|++|+..
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~---g-~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD---G-KIREYE--LPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT---C-CEEEEE--CSSTTCCEEEEEECTTSCEEEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC---C-CEEEec--CCCCCCCCceEEEcCCCCEEEEe
Confidence 55544322 1222334455678999998643 2468889984 2 222221 11 12223345556689999865
Q ss_pred CcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceE-EEeeCCcEEEEE--cCceEEEeCCCCeEE
Q 041651 186 GRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFV-HLLPDGNLFIFA--NTRSILFDYKQNKVL 255 (557)
Q Consensus 186 G~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~~G~ifv~g--g~~~~~yDp~t~~W~ 255 (557)
-. ...+..|... .+....... . ....|.. ..-++|+||+.. ++...+||+ ++++.
T Consensus 159 ~~-~~~i~~~~~~------g~~~~~~~~-~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 159 NQ-NNAIGRITES------GDITEFKIP-T------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp TT-TTEEEEECTT------CCEEEEECS-S------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CC-CCEEEEEcCC------CcEEEeeCC-C------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 32 2234444211 122211110 0 0112433 334589999887 345788999 77665
No 115
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.32 Score=49.13 Aligned_cols=142 Identities=8% Similarity=0.048 Sum_probs=72.9
Q ss_pred eEEEEECCCCc------EE-ECc--cCCCcccccCeecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-
Q 041651 98 HSILYDVATNA------YR-PLM--VQTDTWCSSGSVLPN-GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE- 166 (557)
Q Consensus 98 ~~~~yDp~t~~------w~-~l~--~~~~~~c~~~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~- 166 (557)
.+.+||..+.+ -. .+. ..+.....+.+..++ +.++++|+.. ..+.+||.. +.+-...-. ...
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~v~iwd~~---~~~~~~~~~-~~~~ 209 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS---NFASIWDLK---AKKEVIHLS-YTSP 209 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS---SCEEEEETT---TTEEEEEEC-CCCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC---CCEEEEECC---CCCcceEEe-cccc
Confidence 47788887765 11 111 112222333455667 7899998863 569999987 443221100 111
Q ss_pred ----ccCcceEEEecCC-cEEEEcCcCC--CceeEe-cCCCCCCCCCceeeecccc-cccccccCCccceEEEee-CCcE
Q 041651 167 ----RRWYATNQILPDG-RIIIIGGRRQ--FNYEFY-PKSDEDLSFPQTFMLHFLL-ETRDYAENNLYPFVHLLP-DGNL 236 (557)
Q Consensus 167 ----~R~y~s~~~L~dG-~vyvvGG~~~--~~~E~y-P~~~~~~~~~~w~~~~~l~-~t~d~~~~~~yp~~~~~~-~G~i 236 (557)
...-.+++..++| .++++|+.++ ..+.+| ... + .. ....+. ... ..--.+...+ +|++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~--~---~~--~~~~~~~~~~-----~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN--A---NT--PLQTLNQGHQ-----KGILSLDWCHQDEHL 277 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS--T---TS--CSBCCCSCCS-----SCEEEEEECSSCSSC
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC--C---CC--CcEEeecCcc-----CceeEEEeCCCCCCe
Confidence 2333455566676 5788777654 145566 321 0 00 000010 000 0011223345 8888
Q ss_pred EEEEcC--ceEEEeCCCCeEEEEe
Q 041651 237 FIFANT--RSILFDYKQNKVLKEY 258 (557)
Q Consensus 237 fv~gg~--~~~~yDp~t~~W~~~~ 258 (557)
++.|+. ...+||..+.+-...+
T Consensus 278 l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp EEEEESSSEEEEECSSSCCEEEEE
T ss_pred EEEEeCCCCEEEeeCCCCccceee
Confidence 888875 4678999887765434
No 116
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.07 E-value=1.1 Score=44.47 Aligned_cols=50 Identities=16% Similarity=0.170 Sum_probs=33.4
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..+++....-..+.....+.++.+||+.+++||.+ ..+++||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 47899998876543222233223335566899999999863 579999976
No 117
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.07 E-value=1.2 Score=43.54 Aligned_cols=83 Identities=10% Similarity=-0.014 Sum_probs=46.7
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCceec-CCcccccccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYN-DGDHVVRTFTPCDDDQCDWIE-LPQHLSERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~-~g~~~v~~ydp~~~~t~~W~~-~~~~m~~~R~y~s~~~L 176 (557)
+.+||+.+++++.+.........+.+..+||++|+..... .....+.+||+. +.+... +.. ......-...+.-
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~---~~~~~~~~~~-~~~~~~~~~i~~d 143 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN---GDNLQDIIED-LSTAYCIDDMVFD 143 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT---SCSCEEEECS-SSSCCCEEEEEEC
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC---CCEEEEEEcc-CccCCcccceEEC
Confidence 7789999988876542222223344556799998876432 112478999987 444321 111 1112222344555
Q ss_pred cCCcEEEEc
Q 041651 177 PDGRIIIIG 185 (557)
Q Consensus 177 ~dG~vyvvG 185 (557)
++|++|+..
T Consensus 144 ~~g~l~v~~ 152 (333)
T 2dg1_A 144 SKGGFYFTD 152 (333)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEe
Confidence 677777753
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.63 Score=46.14 Aligned_cols=59 Identities=5% Similarity=-0.124 Sum_probs=33.6
Q ss_pred CeecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcC
Q 041651 123 GSVLP--NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRR 188 (557)
Q Consensus 123 ~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~ 188 (557)
.+..+ +|+.+++|+.+ ..+++||.. +.+-..... ........+++.-+||+++++|+.+
T Consensus 131 ~~~~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNR---GTIGFQSYE---DDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp EECCC---CCEEEEEETT---CCEEEEESS---SSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTT
T ss_pred EEcCCCCCCCEEEEEeCC---CcEEEEECC---CCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCC
Confidence 44556 88999998863 578999987 433221110 1122223455556677777777644
No 119
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.98 E-value=0.65 Score=45.12 Aligned_cols=111 Identities=10% Similarity=0.062 Sum_probs=56.9
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEec--CCcEEEEcCcCCCceeEe-cCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQILP--DGRIIIIGGRRQFNYEFY-PKS 198 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L~--dG~vyvvGG~~~~~~E~y-P~~ 198 (557)
.++-+||+.+++|+.+ ..+++||.. ..+...+.. +.. ...-.+++..+ +|++++.|+.+. ++.+| ...
T Consensus 15 ~~~s~~g~~las~s~D---~~v~iw~~~---~~~~~~~~~-l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~ 86 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSD---KTIKIFEVE---GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWKEEN 86 (297)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEEBC---SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEEBSS
T ss_pred EEECCCCCEEEEEeCC---CEEEEEecC---CCCcEEEEE-EccccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEEcCC
Confidence 3455789999999873 579999986 333322221 322 12122222222 388888888664 55666 331
Q ss_pred CCCCCCCceeeecccccccccccCCccceEEEeeC--CcEEEEEcCc--eEEEeCCCC
Q 041651 199 DEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPD--GNLFIFANTR--SILFDYKQN 252 (557)
Q Consensus 199 ~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~--G~ifv~gg~~--~~~yDp~t~ 252 (557)
..|.....+..... .--.+...++ |++++.|+.+ ..+||..+.
T Consensus 87 ------~~~~~~~~~~~h~~-----~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 87 ------GRWSQIAVHAVHSA-----SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ------SCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred ------CceEEEEEeecCCC-----ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 12211111100000 0011223344 7888888754 568887765
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.90 E-value=1.4 Score=42.85 Aligned_cols=87 Identities=8% Similarity=-0.045 Sum_probs=49.6
Q ss_pred EEEEECCCCc----EEECccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEcC-CCCCCCceecCCcccccccCcce
Q 041651 99 SILYDVATNA----YRPLMVQTDTWCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTP-CDDDQCDWIELPQHLSERRWYAT 172 (557)
Q Consensus 99 ~~~yDp~t~~----w~~l~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp-~~~~t~~W~~~~~~m~~~R~y~s 172 (557)
+.+||..+++ ...+. .+.....+.+..++|+ .+++|+.. ..+.+||. . +.+...+.. ......-.+
T Consensus 35 v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~---~~~~~~~~~-~~~~~~v~~ 106 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG---SPSFQALTN-NEANLGICR 106 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS---SSSEEECBS-CCCCSCEEE
T ss_pred EEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc---CCceEeccc-cCCCCceEE
Confidence 6788877766 33322 2222233445667899 88888863 57999998 7 444333221 112222334
Q ss_pred EEEecCCcEEEEcCcCCCceeEe
Q 041651 173 NQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 173 ~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
++..+ ++.++.|+.++ .+.+|
T Consensus 107 l~~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EEEET-TTEEEEEETTS-EEEEE
T ss_pred EEeCC-CCEEEEEcCCC-eEEEE
Confidence 45555 78888887654 34445
No 121
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.89 E-value=1.3 Score=49.23 Aligned_cols=140 Identities=15% Similarity=0.196 Sum_probs=76.2
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L 176 (557)
.+.+||..+++....-..+.....+.+..++|..+++|+.+ ..+.+||.. +. |..... +.. ...-.+++..
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~---~~-~~~~~~-~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE---NN-WALEQT-FEGHEHFVMCVAFN 149 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGG---GT-SEEEEE-EECCSSCEEEEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECC---CC-ceEEEE-EcCCCCcEEEEEEE
Confidence 37899998887654333333333345666899998888763 578999986 33 222211 221 1222334444
Q ss_pred c-CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEee--CCcEEEEEcC--ceEEEeCC
Q 041651 177 P-DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLP--DGNLFIFANT--RSILFDYK 250 (557)
Q Consensus 177 ~-dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~--~G~ifv~gg~--~~~~yDp~ 250 (557)
+ +|+.+++|+.++ .+.+| ... + .....+.. .. ......+...+ +|+.+++|+. ...+||..
T Consensus 150 p~~~~~l~~~~~dg-~v~vwd~~~--~---~~~~~~~~--~~-----~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 150 PKDPSTFASGCLDR-TVKVWSLGQ--S---TPNFTLTT--GQ-----ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp TTEEEEEEEEETTS-EEEEEETTC--S---SCSEEEEC--CC-----TTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred cCCCCEEEEEeCCC-eEEEEECCC--C---cceeEEec--CC-----CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 5 688888887654 45556 221 0 01011110 00 00111233445 8888888875 46789998
Q ss_pred CCeEEEEe
Q 041651 251 QNKVLKEY 258 (557)
Q Consensus 251 t~~W~~~~ 258 (557)
+.+....+
T Consensus 217 ~~~~~~~~ 224 (814)
T 3mkq_A 217 TKSCVATL 224 (814)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEE
Confidence 87755433
No 122
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.89 E-value=1.7 Score=43.62 Aligned_cols=77 Identities=12% Similarity=0.207 Sum_probs=40.5
Q ss_pred EEEEECCCCc--EEECccCC-------CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccC
Q 041651 99 SILYDVATNA--YRPLMVQT-------DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRW 169 (557)
Q Consensus 99 ~~~yDp~t~~--w~~l~~~~-------~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~ 169 (557)
+.+||++|++ |+.-.... .....+.....+|+||+.... ..+..||+.++ ...|..-. ... .
T Consensus 65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----g~l~a~d~~tG-~~~W~~~~---~~~-~ 135 (376)
T 3q7m_A 65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----AQVYALNTSDG-TVAWQTKV---AGE-A 135 (376)
T ss_dssp EEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT----SEEEEEETTTC-CEEEEEEC---SSC-C
T ss_pred EEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC----CEEEEEECCCC-CEEEEEeC---CCc-e
Confidence 6788988776 54322110 111122334457788875432 46899999843 44686522 111 1
Q ss_pred cceEEEecCCcEEEEc
Q 041651 170 YATNQILPDGRIIIIG 185 (557)
Q Consensus 170 y~s~~~L~dG~vyvvG 185 (557)
..+. ++.+|+||+..
T Consensus 136 ~~~p-~~~~~~v~v~~ 150 (376)
T 3q7m_A 136 LSRP-VVSDGLVLIHT 150 (376)
T ss_dssp CSCC-EEETTEEEEEC
T ss_pred EcCC-EEECCEEEEEc
Confidence 1222 33478887754
No 123
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.86 E-value=1.3 Score=42.26 Aligned_cols=135 Identities=10% Similarity=0.105 Sum_probs=68.7
Q ss_pred EEEEECCCCcEEECccC---CC--cccccCee-cCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcce
Q 041651 99 SILYDVATNAYRPLMVQ---TD--TWCSSGSV-LPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~---~~--~~c~~~~~-l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s 172 (557)
+.+||+..+....+... .. ....+.++ -.+|++|+.+... ...+.+||+. ...-.... ......-.+
T Consensus 53 i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~--~~~i~~~d~~---g~~~~~~~--~~~~~~~~~ 125 (286)
T 1q7f_A 53 IQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP--THQIQIYNQY---GQFVRKFG--ATILQHPRG 125 (286)
T ss_dssp EEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG--GCEEEEECTT---SCEEEEEC--TTTCSCEEE
T ss_pred EEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC--CCEEEEECCC---CcEEEEec--CccCCCceE
Confidence 67888875544443321 11 11223334 3689999987421 2578999965 33222221 111112234
Q ss_pred EEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceE-EEeeCCcEEEEEc--CceEEEe
Q 041651 173 NQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFV-HLLPDGNLFIFAN--TRSILFD 248 (557)
Q Consensus 173 ~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~~G~ifv~gg--~~~~~yD 248 (557)
++.-++|++||....+ ..+.+| +.. ........ . .....|.. .+-++|+||+... +...+||
T Consensus 126 i~~~~~g~l~v~~~~~-~~i~~~~~~g------~~~~~~~~--~-----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKV-MRVIIFDQNG------NVLHKFGC--S-----KHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp EEECTTSCEEEEETTT-TEEEEECTTS------CEEEEEEC--T-----TTCSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred EEEeCCCCEEEEECCC-CEEEEEcCCC------CEEEEeCC--C-----CccCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 5666789999876433 234455 321 11111110 0 00113443 4456899998863 4678899
Q ss_pred CCCCeE
Q 041651 249 YKQNKV 254 (557)
Q Consensus 249 p~t~~W 254 (557)
+.....
T Consensus 192 ~~g~~~ 197 (286)
T 1q7f_A 192 YEGQYL 197 (286)
T ss_dssp TTCCEE
T ss_pred CCCCEE
Confidence 866543
No 124
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.76 E-value=1 Score=44.96 Aligned_cols=136 Identities=7% Similarity=0.068 Sum_probs=75.5
Q ss_pred eEEEEECCCCcEEECccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEE
Q 041651 98 HSILYDVATNAYRPLMVQT--DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQI 175 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~ 175 (557)
.+.+||..++....+.... .....+.+..++++.+++|+.+ ..+.+||.. ...-..+. .....-.+++.
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~---~~~~~~~~---~h~~~v~~~~~ 212 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLD---GHEIFKEK---LHKAKVTHAEF 212 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETT---SCEEEEEE---CSSSCEEEEEE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECC---CCEEEEec---cCCCcEEEEEE
Confidence 4778999887766654322 2223345666899999999863 589999985 33222211 12233445666
Q ss_pred ecCCc-EEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEee-CCcEEEEEcC--ceEEEeCC
Q 041651 176 LPDGR-IIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLP-DGNLFIFANT--RSILFDYK 250 (557)
Q Consensus 176 L~dG~-vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~-~G~ifv~gg~--~~~~yDp~ 250 (557)
.++++ +++.|+.++ .+.+| ....+ ..... ...+ ... ..--.+...+ +|+.++.++. ...+||..
T Consensus 213 ~~~~~~~l~s~~~d~-~i~iwd~~~~~--~~~~~--~~~~-~~~-----~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 213 NPRCDWLMATSSVDA-TVKLWDLRNIK--DKNSY--IAEM-PHE-----KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp CSSCTTEEEEEETTS-EEEEEEGGGCC--STTCE--EEEE-ECS-----SCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred CCCCCCEEEEEeCCC-EEEEEeCCCCC--cccce--EEEe-cCC-----CceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 77888 888887654 45566 32100 00011 1101 000 0011234456 8998888874 46789987
Q ss_pred CCe
Q 041651 251 QNK 253 (557)
Q Consensus 251 t~~ 253 (557)
+.+
T Consensus 282 ~~~ 284 (383)
T 3ei3_B 282 DWS 284 (383)
T ss_dssp BTT
T ss_pred CCc
Confidence 643
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.76 E-value=0.7 Score=47.67 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=46.8
Q ss_pred ceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 97 AHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 97 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
..+.+||......+.+... .....+.+.-+||+.+++++...+...+.+||.. +.+...+.. ......+.+.-
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~---tg~~~~l~~---~~~~~~~~~~s 231 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA---NGAVRQVAS---FPRHNGAPAFS 231 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCCEEEEEC---CSSCEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC---CCcEEEeec---CCCcccCEEEc
Confidence 4678889877665555332 2223334566899988888865455689999988 554433221 11223334445
Q ss_pred cCCcEEE
Q 041651 177 PDGRIII 183 (557)
Q Consensus 177 ~dG~vyv 183 (557)
+||+.++
T Consensus 232 pdg~~la 238 (415)
T 2hqs_A 232 PDGSKLA 238 (415)
T ss_dssp TTSSEEE
T ss_pred CCCCEEE
Confidence 5666444
No 126
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.74 E-value=1.8 Score=42.98 Aligned_cols=237 Identities=12% Similarity=0.076 Sum_probs=113.8
Q ss_pred CcEEECccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEE
Q 041651 107 NAYRPLMVQ---TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIII 183 (557)
Q Consensus 107 ~~w~~l~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyv 183 (557)
.+|+.+... .+....+..+. ++++|++|-. + .+ |-..++ ..+|+.+......+-....++...++++|+
T Consensus 66 ~tW~~~~~~~~~~~~~~~~i~~~-~~~~~~~g~~--g--~i--~~S~Dg-G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~ 137 (327)
T 2xbg_A 66 QTWEPRTLVLDHSDYRFNSVSFQ-GNEGWIVGEP--P--IM--LHTTDG-GQSWSQIPLDPKLPGSPRLIKALGNGSAEM 137 (327)
T ss_dssp SSCEECCCCCSCCCCEEEEEEEE-TTEEEEEEET--T--EE--EEESST-TSSCEECCCCTTCSSCEEEEEEEETTEEEE
T ss_pred CCCeECCCCCCCCCccEEEEEec-CCeEEEEECC--C--eE--EEECCC-CCCceECccccCCCCCeEEEEEECCCCEEE
Confidence 468776532 12222233333 5788887532 1 23 322221 578998753111111123455566889998
Q ss_pred EcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCce-EE-EeCCCCeEEEEecC
Q 041651 184 IGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRS-IL-FDYKQNKVLKEYPE 260 (557)
Q Consensus 184 vGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~-~~-yDp~t~~W~~~~p~ 260 (557)
+|... .+| ... . ..+|........ .. .-.+...++|++++++.... .. -|....+|.. +..
T Consensus 138 ~~~~g----~v~~S~D-g---G~tW~~~~~~~~------~~-~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~-~~~ 201 (327)
T 2xbg_A 138 ITNVG----AIYRTKD-S---GKNWQALVQEAI------GV-MRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP-HNR 201 (327)
T ss_dssp EETTC----CEEEESS-T---TSSEEEEECSCC------CC-EEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE-EEC
T ss_pred EeCCc----cEEEEcC-C---CCCCEEeecCCC------cc-eEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE-CCC
Confidence 87522 244 321 1 346865432110 01 11234456888887774332 22 2333578874 432
Q ss_pred CCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceeec---CC
Q 041651 261 IPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEE---MP 337 (557)
Q Consensus 261 lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~---M~ 337 (557)
+. ..... ..+..+ ++++|+++... ..+ +.+ .+...+|+... ++
T Consensus 202 -~~--~~~~~---~~~~~~----------~g~~~~~~~~G-~~~----------------~s~-~D~G~tW~~~~~~~~~ 247 (327)
T 2xbg_A 202 -TT--SRRLH---NMGFTP----------DGRLWMIVNGG-KIA----------------FSD-PDNSENWGELLSPLRR 247 (327)
T ss_dssp -CS--SSCEE---EEEECT----------TSCEEEEETTT-EEE----------------EEE-TTEEEEECCCBCTTSS
T ss_pred -CC--CCccc---eeEECC----------CCCEEEEeCCc-eEE----------------Eec-CCCCCeeEeccCCccc
Confidence 21 12221 122222 67888776421 111 000 01124788753 44
Q ss_pred CCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCC-CCCcccccccceeccCCcEEEe
Q 041651 338 LPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEP-STRPRMYHSSAILLTDGRVLIG 416 (557)
Q Consensus 338 ~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~-~~~~R~yhs~a~llpdG~V~v~ 416 (557)
......+.+..+++++|++|+.. . +|- .+|.|++|+.+.. ...+..+++++. ..+++++++
T Consensus 248 ~~~~~~~v~~~~~~~~~~~g~~g--~--------------i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~-~~~~~~~~~ 309 (327)
T 2xbg_A 248 NSVGFLDLAYRTPNEVWLAGGAG--A--------------LLC-SQDGGQTWQQDVDVKKVPSNFYKILF-FSPDQGFIL 309 (327)
T ss_dssp CCSCEEEEEESSSSCEEEEESTT--C--------------EEE-ESSTTSSCEECGGGTTSSSCCCEEEE-EETTEEEEE
T ss_pred CCcceEEEEecCCCEEEEEeCCC--e--------------EEE-eCCCCcccEEcCccCCCCCCeEEEEE-ECCCceEEE
Confidence 43334444456789999987632 1 121 2345679998753 233444454444 367888877
Q ss_pred cCC
Q 041651 417 GSN 419 (557)
Q Consensus 417 GG~ 419 (557)
|..
T Consensus 310 G~~ 312 (327)
T 2xbg_A 310 GQK 312 (327)
T ss_dssp CST
T ss_pred cCC
Confidence 754
No 127
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.17 Score=50.18 Aligned_cols=58 Identities=9% Similarity=0.091 Sum_probs=35.1
Q ss_pred CCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccC---CcEEEecCCCC
Q 041651 350 NGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTD---GRVLIGGSNPH 421 (557)
Q Consensus 350 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpd---G~V~v~GG~~~ 421 (557)
|++.+++|+.+ | .+.+||..++. ..|.....+......-......|| |+++++|+.+.
T Consensus 171 ~~~~l~~~~~d-g------------~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 171 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp TTCEEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred CCCEEEEEeCC-C------------eEEEEEecCCC-cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 79999998765 2 57899886651 134433322221222223456788 89999998654
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.63 E-value=2 Score=44.14 Aligned_cols=134 Identities=15% Similarity=0.166 Sum_probs=71.0
Q ss_pred eEEEEECCCCcEEECccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEE
Q 041651 98 HSILYDVATNAYRPLMVQT--DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~ 174 (557)
.+.+||.+++....+.... ...+.+..+.++|+++++|+.. ..+.+||.. ... +.. +.. ...-.+++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~---~~~---~~~-~~~h~~~v~~v~ 257 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD---GKE---LWN-LRMHKKKVTHVA 257 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS---SCB---CCC-SBCCSSCEEEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC---cce---eEE-EecccceEEeee
Confidence 3788999887766554322 2233345566899999999863 578999976 322 111 221 22223344
Q ss_pred EecCCc-EEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceE--EEeeCCcEEEEEcCc--eEEEe
Q 041651 175 ILPDGR-IIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFV--HLLPDGNLFIFANTR--SILFD 248 (557)
Q Consensus 175 ~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~--~~~~~G~ifv~gg~~--~~~yD 248 (557)
.-+++. +++.|+.+. .+.+| -...+ .-..+..... ...+.. ...+||+.++.|+.+ ..+||
T Consensus 258 ~~p~~~~~~~s~s~d~-~v~iwd~~~~~-----~~~~~~~~~~-------h~~~v~~~~~spdg~~l~s~~~D~~i~iwd 324 (435)
T 4e54_B 258 LNPCCDWFLATASVDQ-TVKIWDLRQVR-----GKASFLYSLP-------HRHPVNAACFSPDGARLLTTDQKSEIRVYS 324 (435)
T ss_dssp ECTTCSSEEEEEETTS-BCCEEETTTCC-----SSSCCSBCCB-------CSSCEEECCBCTTSSEEEEEESSSCEEEEE
T ss_pred ecCCCceEEEEecCcc-eeeEEeccccc-----ccceEEEeee-------ccccccceeECCCCCeeEEEcCCCEEEEEE
Confidence 445665 666666553 44555 22100 0000000000 011111 224689988888754 67899
Q ss_pred CCCCeE
Q 041651 249 YKQNKV 254 (557)
Q Consensus 249 p~t~~W 254 (557)
..+..-
T Consensus 325 ~~~~~~ 330 (435)
T 4e54_B 325 ASQWDC 330 (435)
T ss_dssp SSSSSS
T ss_pred CCCCcc
Confidence 877543
No 129
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.58 E-value=0.8 Score=45.83 Aligned_cols=146 Identities=10% Similarity=0.104 Sum_probs=72.8
Q ss_pred EEEEECCCCc------EEECccCC----CcccccCeec----CCCcE-EEEcCCCCCCCeEEEEcCCC------CCCCce
Q 041651 99 SILYDVATNA------YRPLMVQT----DTWCSSGSVL----PNGTL-VQSGGYNDGDHVVRTFTPCD------DDQCDW 157 (557)
Q Consensus 99 ~~~yDp~t~~------w~~l~~~~----~~~c~~~~~l----~dG~i-~v~GG~~~g~~~v~~ydp~~------~~t~~W 157 (557)
+.+||..+++ +..+.... .....+.... ++++. +++|+.. ..+.+||..+ ...-.|
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTTTCC
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccceeec
Confidence 6788887776 66554331 2223345566 78998 8888763 4688888762 101122
Q ss_pred ecCCcccc--------cccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCcee-eecccccccccccCCccce
Q 041651 158 IELPQHLS--------ERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYPF 227 (557)
Q Consensus 158 ~~~~~~m~--------~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp~ 227 (557)
..... +. ....-.+++..++| .+++|+.++ .+.+| ... .... .+....... .....--.
T Consensus 170 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~------~~~~~~~~~~~~h~--~~~~~i~~ 238 (397)
T 1sq9_A 170 SPTLE-LQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELST------LRPLYNFESQHSMI--NNSNSIRS 238 (397)
T ss_dssp CCEEE-EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTT------TEEEEEEECCC-----CCCCCEEE
T ss_pred cCcce-eeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCC------CceeEEEecccccc--ccCCccce
Confidence 21111 21 13334556667788 777777554 45566 321 0111 111000000 00000112
Q ss_pred EEEeeCCcEEEEEcCc-----eEEEeCCCCeEEEEe
Q 041651 228 VHLLPDGNLFIFANTR-----SILFDYKQNKVLKEY 258 (557)
Q Consensus 228 ~~~~~~G~ifv~gg~~-----~~~yDp~t~~W~~~~ 258 (557)
+...++|++++.|+.+ ..+||..+.+-...+
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 3445689988887654 568999887655434
No 130
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.52 E-value=0.26 Score=48.48 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=37.0
Q ss_pred CeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC---CcEEEEcCcCCCceeEe
Q 041651 123 GSVLPNG-TLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD---GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 123 ~~~l~dG-~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d---G~vyvvGG~~~~~~E~y 195 (557)
....++| +++++|+...+...+++||.. +.+...... ......-.+++..++ |+.+++|+.++ .+.+|
T Consensus 24 ~~~~p~~~~l~~~~s~~~~d~~v~iw~~~---~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iw 95 (357)
T 3i2n_A 24 CKWVPCSAKFVTMGNFARGTGVIQLYEIQ---HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIW 95 (357)
T ss_dssp EEECTTSSEEEEEEC--CCCEEEEEEEEC---SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEE
T ss_pred EEEcCCCceEEEecCccCCCcEEEEEeCC---CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEE
Confidence 3445667 456666542224679999987 555433221 223333344444455 68888887654 34555
No 131
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.51 E-value=0.064 Score=53.86 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=35.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEecCCcEEEEcCcC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQILPDGRIIIIGGRR 188 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~ 188 (557)
.++-+||+++++|+.+ ..+++||.. +..|..... +.. ...-.+++..+||+.++.|+.+
T Consensus 17 ~~~s~~g~~l~~~~~d---~~i~iw~~~---~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTAT---NQVELYEQD---GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp CEECSSSSEEECCCSS---SCBCEEEEE---TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETT
T ss_pred EEECCCCCEEEEecCC---CEEEEEEcc---CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCC
Confidence 4556799999998763 468889887 666655543 432 2222334444566666665543
No 132
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.43 E-value=1.6 Score=44.70 Aligned_cols=136 Identities=12% Similarity=0.095 Sum_probs=70.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||..+++....-..+.... .++..++..+++|+.+ ..+.+||.. +.+-......+......-.....
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~s~s~d---g~i~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKD---RSIAVWDMA---SPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETT---SCEEEEECS---SSSCCEEEEEECCCSSCEEEEEE-
T ss_pred eEEEEECCCCcEEEEEcCCCCcE--EEEEEcCCEEEEeeCC---CcEEEEeCC---CCCCceeeeEecCCCCcEEEEEe-
Confidence 47889998876543222222111 1222356788888763 579999987 32211100112222222233334
Q ss_pred CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC--ceEEEeCCCCeE
Q 041651 178 DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT--RSILFDYKQNKV 254 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~--~~~~yDp~t~~W 254 (557)
+|+.+++|+.++ .+.+| ... + . ....+.. ...+...+..+++.++.|+. ...+||..+++-
T Consensus 265 ~~~~l~s~~~dg-~i~vwd~~~--~----~--~~~~~~~-------~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 328 (435)
T 1p22_A 265 DDKYIVSASGDR-TIKVWNTST--C----E--FVRTLNG-------HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 328 (435)
T ss_dssp ETTEEEEEETTS-EEEEEETTT--C----C--EEEEEEC-------CSSCEEEEEEETTEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEeCCC-eEEEEECCc--C----c--EEEEEcC-------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCE
Confidence 788888887654 45566 331 0 1 1111111 11123445557888888864 477899998775
Q ss_pred EEEe
Q 041651 255 LKEY 258 (557)
Q Consensus 255 ~~~~ 258 (557)
...+
T Consensus 329 ~~~~ 332 (435)
T 1p22_A 329 LRVL 332 (435)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5433
No 133
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.36 E-value=2.3 Score=43.86 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=38.6
Q ss_pred eeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEc-CCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCC
Q 041651 342 MGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYR-PSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 342 ~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YD-P~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~ 420 (557)
.|.+++.-||+||..|-...|.-|.....+ ...+..-. |... +...++ +-.+|+ .+|..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~~-~~~p~~v~~~~~~---~v~~va----~G~~hs-~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQ---KVVQVS----CGWRHT-LAVTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSSC-EEEEEEECCGGGC---CEEEEE----ECSSEE-EEEETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCCC-CccCEEEeccCCC---cEEEEE----eCCCeE-EEEeCCCCEEEecCCC
Confidence 455667789999999954433322211110 11121111 1112 343332 234675 5566899999999876
Q ss_pred Cc
Q 041651 421 HI 422 (557)
Q Consensus 421 ~~ 422 (557)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 134
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.30 E-value=1.8 Score=41.25 Aligned_cols=55 Identities=11% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC
Q 041651 127 PNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ 189 (557)
Q Consensus 127 ~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~ 189 (557)
+++..+++|+.+ ..+++||.. +.+-...- ......-.+++..++|+.+++|+.++
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~---~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD---DQWLGTVV--YTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES---SSEEEEEE--EECSSCEEEEEEETTTTEEEEEETTS
T ss_pred cCCCEEEEEEcC---CcEEEEECC---CCEEEEEe--ecCCccEEEEEECCCCCEEEEecCCC
Confidence 788899998863 579999986 43322211 11233344566677999999998765
No 135
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.29 E-value=2.2 Score=40.95 Aligned_cols=92 Identities=14% Similarity=0.235 Sum_probs=49.5
Q ss_pred EEEEECCCC--cEEECcc--CCCcccccCeecC--CCcEEEEcCCCCCCCeEEEEcCCCCC----CCceecCCccccc-c
Q 041651 99 SILYDVATN--AYRPLMV--QTDTWCSSGSVLP--NGTLVQSGGYNDGDHVVRTFTPCDDD----QCDWIELPQHLSE-R 167 (557)
Q Consensus 99 ~~~yDp~t~--~w~~l~~--~~~~~c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~~~----t~~W~~~~~~m~~-~ 167 (557)
+.+||..++ .++.+.. .+.....+.+..+ |++++++|+.+ ..+++||..+.. ...|..... +.. .
T Consensus 35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~ 110 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---KTVKLWEEDPDQEECSGRRWNKLCT-LNDSK 110 (351)
T ss_dssp EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEECTTSCTTSSCSEEEEEE-ECCCS
T ss_pred EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC---CeEEEEecCCCcccccccCcceeee-ecccC
Confidence 678887654 3333322 1222222334445 68999999873 468889876320 122333221 222 2
Q ss_pred cCcceEEEecC--CcEEEEcCcCCCceeEe
Q 041651 168 RWYATNQILPD--GRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 168 R~y~s~~~L~d--G~vyvvGG~~~~~~E~y 195 (557)
..-.+++..++ ++.+++|+.++ .+.+|
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred CceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 22334555666 88888888654 44555
No 136
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.24 E-value=0.54 Score=45.81 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=36.5
Q ss_pred CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcce--EEEecCCcEEEE
Q 041651 116 TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT--NQILPDGRIIII 184 (557)
Q Consensus 116 ~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s--~~~L~dG~vyvv 184 (557)
...|..+..+. ||++|+..|. .|..+++++|++ +.+=..--+ |. ..+++ .+.. +++||++
T Consensus 41 ~~~ftqGL~~~-~~~LyestG~-~g~S~v~~vD~~---Tgkv~~~~~-l~--~~~FgeGit~~-g~~ly~l 102 (262)
T 3nol_A 41 TKAFTEGFFYR-NGYFYESTGL-NGRSSIRKVDIE---SGKTLQQIE-LG--KRYFGEGISDW-KDKIVGL 102 (262)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEE-TTEEEEEEECTT---TCCEEEEEE-CC--TTCCEEEEEEE-TTEEEEE
T ss_pred CCcccceEEEE-CCEEEEECCC-CCCceEEEEECC---CCcEEEEEe-cC--CccceeEEEEe-CCEEEEE
Confidence 34566666655 8999999986 345689999999 554332111 32 22332 3444 6677775
No 137
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.16 E-value=2.5 Score=44.83 Aligned_cols=71 Identities=7% Similarity=-0.028 Sum_probs=43.9
Q ss_pred CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC--ceecCCccccc-ccC-cceEEEec--CCcEEEEcCcCC
Q 041651 116 TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQC--DWIELPQHLSE-RRW-YATNQILP--DGRIIIIGGRRQ 189 (557)
Q Consensus 116 ~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~--~W~~~~~~m~~-~R~-y~s~~~L~--dG~vyvvGG~~~ 189 (557)
+.....+.++-+||+.+++|+. ..+.+||.. +. ...... .+.. ... -.+++..+ ||+.+++|+.++
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~----~~v~v~~~~---~~~~~~~~~~-~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg 88 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCG----KSAFVRCLD---DGDSKVPPVV-QFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 88 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEET----TEEEEEECC---SSCCSSCSEE-EECTTTTSCEEEEEECSSTTCCEEEEEETTS
T ss_pred ccCceeEEEECCCCCEEEEecC----CeEEEEECC---CCCCccccce-EEecCCCceEEEEEECcCCCCCEEEEecCCC
Confidence 3334445677789999999873 479999987 33 001111 1332 222 34566777 899999988754
Q ss_pred CceeEe
Q 041651 190 FNYEFY 195 (557)
Q Consensus 190 ~~~E~y 195 (557)
.+.+|
T Consensus 89 -~v~vw 93 (615)
T 1pgu_A 89 -KVIVW 93 (615)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 45555
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.16 E-value=1.6 Score=46.92 Aligned_cols=110 Identities=6% Similarity=-0.032 Sum_probs=65.3
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe-c--CCCCC
Q 041651 125 VLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-P--KSDED 201 (557)
Q Consensus 125 ~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P--~~~~~ 201 (557)
+-++|++|+++... ..+.++|.. +.+-.. .+.....-++++.-+||+.+.+++.+ .++.+| . .+ +
T Consensus 145 ~~p~~~~~vs~~~d---~~V~v~D~~---t~~~~~---~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t--~ 212 (543)
T 1nir_A 145 LDLPNLFSVTLRDA---GQIALVDGD---SKKIVK---VIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKE--P 212 (543)
T ss_dssp CCGGGEEEEEEGGG---TEEEEEETT---TCCEEE---EEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSS--C
T ss_pred cCCCCEEEEEEcCC---CeEEEEECC---CceEEE---EEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCC--C
Confidence 45688999987652 579999988 544321 13322224566677899877777766 566677 4 21 1
Q ss_pred CCCCceeeecccccccccccCCccceE-EEee----CCcEEEEEc---CceEEEeCCCCeEEEEec
Q 041651 202 LSFPQTFMLHFLLETRDYAENNLYPFV-HLLP----DGNLFIFAN---TRSILFDYKQNKVLKEYP 259 (557)
Q Consensus 202 ~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~----~G~ifv~gg---~~~~~yDp~t~~W~~~~p 259 (557)
+ ....+. ....|+. ...+ ||+..++++ ....+||..+.+-.+.++
T Consensus 213 ----~--~~~~i~-------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 213 ----T--KVAEIK-------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp ----E--EEEEEE-------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred ----c--EEEEEe-------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 1 111111 1123443 4556 898666654 457789999987765553
No 139
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.04 E-value=1.6 Score=41.97 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=37.2
Q ss_pred CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEE
Q 041651 117 DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIII 184 (557)
Q Consensus 117 ~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvv 184 (557)
..|..+..+ .++++|+..|. .|.++++.+|+. +.+=..--+ ++..-+..+.+.. ++++|++
T Consensus 20 ~~ftqGL~~-~~~~LyestG~-~g~S~v~~vD~~---tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~l 80 (243)
T 3mbr_X 20 TAFTEGLFY-LRGHLYESTGE-TGRSSVRKVDLE---TGRILQRAE-VPPPYFGAGIVAW-RDRLIQL 80 (243)
T ss_dssp TCCEEEEEE-ETTEEEEEECC-TTSCEEEEEETT---TCCEEEEEE-CCTTCCEEEEEEE-TTEEEEE
T ss_pred ccccccEEE-ECCEEEEECCC-CCCceEEEEECC---CCCEEEEEe-CCCCcceeEEEEe-CCEEEEE
Confidence 456655554 46899999986 456789999999 555332211 3322222334444 6788876
No 140
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.94 E-value=4 Score=42.03 Aligned_cols=70 Identities=20% Similarity=0.260 Sum_probs=43.1
Q ss_pred eeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCc
Q 041651 51 AMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGT 130 (557)
Q Consensus 51 ~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ 130 (557)
+...++-++|+||+.+..+ ..+..||+.+++.+.+...... +. .++.++|+
T Consensus 133 P~~la~d~~g~lyv~d~~~---------------------------~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~ 183 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDD---------------------------PRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQ 183 (409)
T ss_dssp EEEEEECSTTEEEEEETTT---------------------------TEEEEEETTTTEEEEEEETCCB-CB-CEECTTSS
T ss_pred ceEEEEeCCCCEEEEecCC---------------------------CcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCC
Confidence 3444555789988876421 1377899998887766443222 22 66677876
Q ss_pred EEEEcCCCCCCCeEEEEcCC
Q 041651 131 LVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 131 i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+.... +...+..||+.
T Consensus 184 ~l~~~d~~-~~~~I~~~d~~ 202 (409)
T 3hrp_A 184 RVYSIGWE-GTHTVYVYMKA 202 (409)
T ss_dssp EEEEEBSS-TTCEEEEEEGG
T ss_pred cEEEEecC-CCceEEEEEcC
Confidence 55444432 22378899986
No 141
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.89 E-value=3.8 Score=41.69 Aligned_cols=102 Identities=10% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc-ccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCC
Q 041651 128 NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE-RRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFP 205 (557)
Q Consensus 128 dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~ 205 (557)
.+.++++|-. ++|++||.. +.+-..+-. +.. ..+--+++..+||+.+++|+.++ ++.+| ... +
T Consensus 115 ~~n~lAvgld----~tV~lWd~~---tg~~~~~~~-~~~~~~~V~sv~fspdg~~lasgs~Dg-~v~iWd~~~--~---- 179 (420)
T 4gga_A 115 SGNVLAVALD----NSVYLWSAS---SGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSSA-EVQLWDVQQ--Q---- 179 (420)
T ss_dssp TTSEEEEEET----TEEEEEETT---TCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETTS-CEEEEETTT--T----
T ss_pred CCCEEEEEeC----CEEEEEECC---CCCEEEEEE-ecCCCCcEEEEEECCCCCEEEEEECCC-eEEEEEcCC--C----
Confidence 3567777742 589999998 665544322 332 23344566678999999988764 46667 331 1
Q ss_pred ceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCe
Q 041651 206 QTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNK 253 (557)
Q Consensus 206 ~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~ 253 (557)
+ .+..+.. ..-....+..++++++.|+.+ ..++|.....
T Consensus 180 ~--~~~~~~~-------h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 180 K--RLRNMTS-------HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp E--EEEEECC-------CSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred c--EEEEEeC-------CCCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 1 1111111 111234566789999988764 5667766543
No 142
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.78 E-value=2.4 Score=43.48 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=47.8
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||..+++...+..... ...+.+.-+||+.+++.+..++...+++||.. +.+...+.. ......+.+.-+
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~---~~~~~~l~~---~~~~~~~~~~sp 276 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA---SGQIRQVTD---GRSNNTEPTWFP 276 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCCEEECCC---CSSCEEEEEECT
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC---CCCEEeCcC---CCCcccceEECC
Confidence 57899999998876643322 23345667899876644433455679999987 555443322 111222334445
Q ss_pred CCcEEEEcC
Q 041651 178 DGRIIIIGG 186 (557)
Q Consensus 178 dG~vyvvGG 186 (557)
||+.+++++
T Consensus 277 dg~~l~~~s 285 (415)
T 2hqs_A 277 DSQNLAFTS 285 (415)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 676555443
No 143
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.76 E-value=3.2 Score=40.09 Aligned_cols=137 Identities=16% Similarity=0.214 Sum_probs=67.0
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+||........................++..+++|+.+ ..+.+||.. ...-..... ..........+...+
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~---~~~~~~~~~-~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTL---GVCKYTVQD-ESHSEWVSCVRFSPN 182 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT---SCEEEEECS-SSCSSCEEEEEECSC
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC---CeEEEEEeC---CCceEEEEe-ccccCcccceEEccC
Confidence 5677777766554433333222333455678888888763 468888876 221111110 111111112222222
Q ss_pred --CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCe
Q 041651 179 --GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNK 253 (557)
Q Consensus 179 --G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~ 253 (557)
+.+++.|+.+. .+.+| ... ......+.... ..--.+...++|++++.|+.+ ..+||..+.+
T Consensus 183 ~~~~~~~s~~~d~-~i~i~d~~~--------~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 183 SSNPIIVSCGWDK-LVKVWNLAN--------CKLKTNHIGHT-----GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp SSSCEEEEEETTS-CEEEEETTT--------TEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCcEEEEEcCCC-EEEEEECCC--------CceeeEecCCC-----CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 35566666543 44555 321 11111111100 001123445799999998754 6789998877
Q ss_pred EEE
Q 041651 254 VLK 256 (557)
Q Consensus 254 W~~ 256 (557)
-..
T Consensus 249 ~~~ 251 (340)
T 4aow_A 249 HLY 251 (340)
T ss_dssp EEE
T ss_pred eee
Confidence 553
No 144
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.62 E-value=1.7 Score=44.13 Aligned_cols=140 Identities=14% Similarity=0.248 Sum_probs=70.5
Q ss_pred EeeCCcEEEEEcC--ceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCcccccc
Q 041651 230 LLPDGNLFIFANT--RSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALA 307 (557)
Q Consensus 230 ~~~~G~ifv~gg~--~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~ 307 (557)
..+||+.++.|+. ...+||..+.+....+ .+..... -.....| +++.+++|+.+.
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v----~~~~~~p----------~~~~l~s~s~d~------ 187 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDI----YSLDYFP----------SGDKLVSGSGDR------ 187 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCE----EEEEECT----------TSSEEEEEETTS------
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---ccCCCCE----EEEEEcC----------CCCEEEEecCCC------
Confidence 3468888887764 4678999888765333 2210000 0112222 566777777542
Q ss_pred ccccccccCCceEEEEecCCCCcceeecCCCCceeeeEEEcC-CCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCC
Q 041651 308 TQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLP-NGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTS 386 (557)
Q Consensus 308 ~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g 386 (557)
++..+|+.. .+.... +.....-......| ||+++++|+.+ + .+.+||..+.
T Consensus 188 ----------~v~iwd~~~--~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~s~d-~------------~v~iwd~~~~-- 239 (393)
T 1erj_A 188 ----------TVRIWDLRT--GQCSLT-LSIEDGVTTVAVSPGDGKYIAAGSLD-R------------AVRVWDSETG-- 239 (393)
T ss_dssp ----------EEEEEETTT--TEEEEE-EECSSCEEEEEECSTTCCEEEEEETT-S------------CEEEEETTTC--
T ss_pred ----------cEEEEECCC--CeeEEE-EEcCCCcEEEEEECCCCCEEEEEcCC-C------------cEEEEECCCC--
Confidence 222233321 111111 11111112234456 89999998765 2 5789998876
Q ss_pred CceE-ecCCCCCccccc----ccceeccCCcEEEecCCCC
Q 041651 387 RRFS-VMEPSTRPRMYH----SSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 387 ~~W~-~~~~~~~~R~yh----s~a~llpdG~V~v~GG~~~ 421 (557)
+-. .+.........| ....+.|||+.+++|+.+.
T Consensus 240 -~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 240 -FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp -CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 432 221110000112 1244568999999998654
No 145
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.58 E-value=3.1 Score=45.63 Aligned_cols=50 Identities=12% Similarity=0.279 Sum_probs=31.8
Q ss_pred eEEEEECCCCcE-----EECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAY-----RPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w-----~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..++.- ...-..+.....+.++.+||+++++|+.+ ..+++||..
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~ 460 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA 460 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC
Confidence 377888765421 11111233333445667899999999873 579999987
No 146
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.51 E-value=4.6 Score=40.83 Aligned_cols=25 Identities=20% Similarity=0.510 Sum_probs=18.6
Q ss_pred EEeeCC-cEEEEEcC--ceEEEeCCCCe
Q 041651 229 HLLPDG-NLFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 229 ~~~~~G-~ifv~gg~--~~~~yDp~t~~ 253 (557)
...++| ++++.|+. ...+||..+.+
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 445788 88888875 46789988765
No 147
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.42 E-value=4.2 Score=39.99 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=114.8
Q ss_pred cCeecCCCcEEEEcCCCCC---------------------CCeEEEEcCCCCCCCceecCC--cccccccCcceEEEecC
Q 041651 122 SGSVLPNGTLVQSGGYNDG---------------------DHVVRTFTPCDDDQCDWIELP--QHLSERRWYATNQILPD 178 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g---------------------~~~v~~ydp~~~~t~~W~~~~--~~m~~~R~y~s~~~L~d 178 (557)
+.++.++|++|+.+..... ...+.++|+. +.+..... ..+.. -.++++-++
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~---p~gia~d~~ 101 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---NAEILQSSGKNLFYL---PHGLSIDTD 101 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---TCCEEEEECTTTCSS---EEEEEECTT
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC---CCeEEeccCCCccCC---ceEEEECCC
Confidence 4566678999988654210 1368899997 44432211 11222 234566678
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEE-Eee-CCcEEEEEc---CceEEEeCCCC
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVH-LLP-DGNLFIFAN---TRSILFDYKQN 252 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~-~~~-~G~ifv~gg---~~~~~yDp~t~ 252 (557)
|++||....+ ..+..| +... ...-..+............-.+|... +.+ +|+||+... ....+||+...
T Consensus 102 g~l~v~d~~~-~~v~~~~~~g~----~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 102 GNYWVTDVAL-HQVFKLDPHSK----EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp SCEEEEETTT-TEEEEECTTCS----SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred CCEEEEECCC-CEEEEEeCCCC----eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 9999886543 344455 3310 00001110000000000111245544 445 799999874 34678996544
Q ss_pred eEEEEecCCCCC-----CCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCC
Q 041651 253 KVLKEYPEIPGA-----DPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHA 327 (557)
Q Consensus 253 ~W~~~~p~lp~~-----~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~ 327 (557)
... .+...... ....+| .+.+ +-| ..++|||+...+ +.+.+||+..
T Consensus 177 ~~~-~~~~~g~~~~~~~~~~~~p-~gia-~d~---------~~g~l~v~d~~~----------------~~I~~~~~~~- 227 (329)
T 3fvz_A 177 FVT-QWGEESSGSSPRPGQFSVP-HSLA-LVP---------HLDQLCVADREN----------------GRIQCFKTDT- 227 (329)
T ss_dssp EEE-EECEECCSSSCCTTEESCE-EEEE-EET---------TTTEEEEEETTT----------------TEEEEEETTT-
T ss_pred EEE-EeccCCCCCCCCCcccCCC-cEEE-EEC---------CCCEEEEEECCC----------------CEEEEEECCC-
Confidence 332 33211000 001122 0222 212 038999986533 2334444431
Q ss_pred CCcceee-cC--CCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEe-cCCCCCcccccc
Q 041651 328 NPSWVME-EM--PLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSV-MEPSTRPRMYHS 403 (557)
Q Consensus 328 ~~~W~~~-~M--~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~-~~~~~~~R~yhs 403 (557)
.+.... .. ...+.. +...-| |.+|+..|... .. +....++.+||+.+. +... +......-.+..
T Consensus 228 -G~~~~~~~~~~~~~~~~-~~~~~p-g~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 228 -KEFVREIKHASFGRNVF-AISYIP-GFLFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp -CCEEEEECCTTTTTCEE-EEEEET-TEEEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEE
T ss_pred -CcEEEEEeccccCCCcc-eeeecC-CEEEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCee
Confidence 122211 11 112222 223345 78888777531 11 111236889998877 5543 222111111222
Q ss_pred cceeccCCcEEEecCCC
Q 041651 404 SAILLTDGRVLIGGSNP 420 (557)
Q Consensus 404 ~a~llpdG~V~v~GG~~ 420 (557)
..++-+||.|||+....
T Consensus 296 ~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHT 312 (329)
T ss_dssp EEEECTTSEEEEEESSS
T ss_pred EEEECCCCCEEEEECCC
Confidence 34467999999987653
No 148
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.23 E-value=2.3 Score=41.40 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=24.5
Q ss_pred ccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc
Q 041651 119 WCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCD 156 (557)
Q Consensus 119 ~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~ 156 (557)
|-.+..+..||++|+..|. .+.+++..+|+. +.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~-~~~s~v~~iD~~---tg~ 55 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGL-YGRSSVRQVALQ---TGK 55 (266)
T ss_dssp CEEEEEECSTTEEEEEECS-TTTCEEEEEETT---TCC
T ss_pred CcccEEEeCCCeEEEECCC-CCCCEEEEEECC---CCC
Confidence 3345566667999998775 245789999998 555
No 149
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.23 E-value=4 Score=39.01 Aligned_cols=120 Identities=15% Similarity=0.123 Sum_probs=60.6
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccC-cceEEEec--CCcEEEEcCcCCCceeEe-cCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRW-YATNQILP--DGRIIIIGGRRQFNYEFY-PKS 198 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~-y~s~~~L~--dG~vyvvGG~~~~~~E~y-P~~ 198 (557)
.+.-++|+++++|+.+ ..+++||..+. ...+..... +..... -.+++..+ |++.++.|+.++ .+.+| ...
T Consensus 17 ~~~~~~~~~l~~~~~d---g~i~iw~~~~~-~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~vwd~~~ 90 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSD---QHIKVFKLDKD-TSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYDK-TVKLWEEDP 90 (351)
T ss_dssp EEECSSSSEEEEEETT---SEEEEEEECSS-SCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEECT
T ss_pred EEEcCCCCEEEEeeCC---CeEEEEECCCC-CCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEEEecCC
Confidence 3445689999999863 57889987632 233433321 332222 22333344 589999988764 35555 321
Q ss_pred CCC-CCCCceeeecccccccccccCCccceEEEeeC--CcEEEEEcCc--eEEEeCCCCe
Q 041651 199 DED-LSFPQTFMLHFLLETRDYAENNLYPFVHLLPD--GNLFIFANTR--SILFDYKQNK 253 (557)
Q Consensus 199 ~~~-~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~--G~ifv~gg~~--~~~yDp~t~~ 253 (557)
.+. .....|.....+.... ..--.+...++ |++++.|+.+ ..+||..+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSK-----GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CcccccccCcceeeeecccC-----CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 000 0011222211111100 00112334566 8888887754 6788977653
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.21 E-value=8 Score=42.40 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=63.3
Q ss_pred eeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCC-------------
Q 041651 51 AMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTD------------- 117 (557)
Q Consensus 51 ~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~------------- 117 (557)
....+..++|+.+++.+...+ +. ....+.+||..+++.+.+.....
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~--------~~-------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 97 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDS--------DR-------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEK 97 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSS--------CT-------------TEEEEEEEETTTCCEEEEECGGGTC-----------
T ss_pred CCCceEecCCCEEEEEeccCC--------CC-------------cccEEEEEECCCCceeEccchhhcccccccccchhh
Confidence 345566689988877764111 00 11357899999988876653211
Q ss_pred -----------cccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC---ceecCCcccccccCcceEEEecCCcEEE
Q 041651 118 -----------TWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQC---DWIELPQHLSERRWYATNQILPDGRIII 183 (557)
Q Consensus 118 -----------~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~---~W~~~~~~m~~~R~y~s~~~L~dG~vyv 183 (557)
......+.-+||+.++++.. ..+++||.. +. .-..+.. ........+.-+||+.++
T Consensus 98 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~---~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la 167 (741)
T 2ecf_A 98 ARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK---QEGKAAVRQLTH---GEGFATDAKLSPKGGFVS 167 (741)
T ss_dssp ---------CCEESCCCEECTTSSEEEEEET----TEEEEEESS---SCSTTSCCBCCC---SSSCEEEEEECTTSSEEE
T ss_pred hhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC---CCCcceEEEccc---CCcccccccCCCCCCEEE
Confidence 11234567789998888764 579999987 44 3333321 123334455667998766
Q ss_pred EcC
Q 041651 184 IGG 186 (557)
Q Consensus 184 vGG 186 (557)
.+.
T Consensus 168 ~~~ 170 (741)
T 2ecf_A 168 FIR 170 (741)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 151
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.93 E-value=0.38 Score=54.02 Aligned_cols=58 Identities=9% Similarity=0.091 Sum_probs=34.2
Q ss_pred CCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccC---CcEEEecCCCC
Q 041651 350 NGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTD---GRVLIGGSNPH 421 (557)
Q Consensus 350 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpd---G~V~v~GG~~~ 421 (557)
||+++++|+.+ | .+.+||..+.. ..+.....+......-......|+ |+++++||.++
T Consensus 169 d~~~l~sgs~d-g------------~I~iwd~~~~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 169 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp GGCCEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred CCCEEEEEECC-C------------eEEEEeccCCc-ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 68888988764 2 57889876641 134433222211111223455688 89999998654
No 152
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.71 E-value=2.6 Score=42.31 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=74.7
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||+.+.+...... +.......++-+||+++++|+. ..+.+++.. +.................+++..+
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~---~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV---TGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT---TCCEEEEECCCCTTEEEEEEEEEE
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec---cCcceeeeecCCCCCCEEEEEEcC
Confidence 47899999877643322 2222334566789999999874 346777765 333221110011111223455677
Q ss_pred CCcEEEEcCcCCC---ceeEe-cCCCCCCCCCceeeecccccccccccCCccc--eEEEeeCCcEEEEEcC--ceEEEeC
Q 041651 178 DGRIIIIGGRRQF---NYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP--FVHLLPDGNLFIFANT--RSILFDY 249 (557)
Q Consensus 178 dG~vyvvGG~~~~---~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp--~~~~~~~G~ifv~gg~--~~~~yDp 249 (557)
||+.++.++.+.. ....| ... ........ .. ......+ .+...|||++++.|+. ...+||.
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~------~~~~~~~~--~~---~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~ 298 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKS------GNTSVLRS--KQ---VTNRFKGITSMDVDMKGELAVLASNDNSIALVKL 298 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEET------TEEEEEEE--EE---EESSCSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CCCEEEEEecCCcceeEEeeccccc------ceecceee--ee---ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEEC
Confidence 9999998876542 12222 110 01111000 00 0001111 2345689999999875 4789999
Q ss_pred CCCeEEE
Q 041651 250 KQNKVLK 256 (557)
Q Consensus 250 ~t~~W~~ 256 (557)
.+.+-.+
T Consensus 299 ~~~~~~~ 305 (365)
T 4h5i_A 299 KDLSMSK 305 (365)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9887553
No 153
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.53 E-value=5.4 Score=38.15 Aligned_cols=58 Identities=10% Similarity=-0.058 Sum_probs=33.7
Q ss_pred CeecCCCcEEEE-------cCCCCCCCeEEEEcCCCCCCCceecCCc-ccc-cccCcceEEEecC-CcEEEEcC
Q 041651 123 GSVLPNGTLVQS-------GGYNDGDHVVRTFTPCDDDQCDWIELPQ-HLS-ERRWYATNQILPD-GRIIIIGG 186 (557)
Q Consensus 123 ~~~l~dG~i~v~-------GG~~~g~~~v~~ydp~~~~t~~W~~~~~-~m~-~~R~y~s~~~L~d-G~vyvvGG 186 (557)
.+...+|++|++ +.. ...+.+||+. +.++..... ... ....-.+++.-+| |++|+...
T Consensus 23 ~~~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 23 PVFDKNGDFYIVAPEVEVNGKP---AGEILRIDLK---TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp EEECTTSCEEEEETTCEETTEE---CCEEEEECTT---TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred ceECCCCCEEEEEeccccCCCC---CCEEEEEeCC---CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 344578999998 322 2468999987 666654321 000 1122334555567 89998764
No 154
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.48 E-value=1.3 Score=43.62 Aligned_cols=60 Identities=12% Similarity=0.058 Sum_probs=36.7
Q ss_pred EEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccC--CcEEEecCCCC
Q 041651 346 ILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTD--GRVLIGGSNPH 421 (557)
Q Consensus 346 v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpd--G~V~v~GG~~~ 421 (557)
..-|+|++++.|+.+ + ++.+||..+. .|..+..+.-....-......|+ +..++.|+.+.
T Consensus 160 ~~~p~~~~l~s~s~D-~------------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 160 IWHPSEALLASSSYD-D------------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EECSSSSEEEEEETT-S------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred EECCCCCEEEEEcCC-C------------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 446899999998865 2 5789998777 77654333211111112334567 77788887654
No 155
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.36 E-value=1.4 Score=44.95 Aligned_cols=89 Identities=9% Similarity=0.076 Sum_probs=48.3
Q ss_pred EECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCc-eecCCcccccccCcceEEEecCC
Q 041651 102 YDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCD-WIELPQHLSERRWYATNQILPDG 179 (557)
Q Consensus 102 yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~-W~~~~~~m~~~R~y~s~~~L~dG 179 (557)
|++.......+...+.....+.++.+ ||+++++|+.+ ..+++||..+..... +...- .+.....-.+++..+++
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d---g~v~vwd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ---GVIKIWNLKEIIVGEVYSSSL-TYDCSSTVTQITMIPNF 123 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT---SEEEEEEHHHHHTTCCCSCSE-EEECSSCEEEEEECTTS
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC---ceEEEeECcccccCcccceee-eccCCCCEEEEEEeCCC
Confidence 44443333333223333333456677 89999999863 579999975200021 11111 12223334556667789
Q ss_pred cEEEEcCcCCCceeEe
Q 041651 180 RIIIIGGRRQFNYEFY 195 (557)
Q Consensus 180 ~vyvvGG~~~~~~E~y 195 (557)
+.++.|+.++ ++.+|
T Consensus 124 ~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 124 DAFAVSSKDG-QIIVL 138 (437)
T ss_dssp SEEEEEETTS-EEEEE
T ss_pred CEEEEEeCCC-EEEEE
Confidence 9999888764 34444
No 156
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.27 E-value=4 Score=38.22 Aligned_cols=134 Identities=10% Similarity=0.055 Sum_probs=70.8
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+..||+.++....+.........+.++.++|++|+.... ...+.+||+. +........ .....-.+.+.-+
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~---~~~~~~~~~--~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAG---SKTQTVLPF--TGLNDPDGVAVDN 159 (270)
T ss_dssp EEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTT---CCSCEECCC--CSCCSCCCEEECT
T ss_pred EEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECC---CceeEeecc--ccCCCceeEEEeC
Confidence 3678888877665543222122334556679999998543 2468888876 433322111 1112223455566
Q ss_pred CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceE-EEeeCCcEEEEE--cCceEEEeCCCCe
Q 041651 178 DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFV-HLLPDGNLFIFA--NTRSILFDYKQNK 253 (557)
Q Consensus 178 dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~-~~~~~G~ifv~g--g~~~~~yDp~t~~ 253 (557)
+|++|+....+ ..+..| +.. ........ . ....|.. .+-++|+||+.. ++...+||+.+..
T Consensus 160 ~g~l~v~~~~~-~~i~~~~~~~------~~~~~~~~--~------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 160 SGNVYVTDTDN-NRVVKLEAES------NNQVVLPF--T------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TCCEEEEEGGG-TEEEEECTTT------CCEEECCC--S------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCCEEEEECCC-CEEEEEecCC------CceEeecc--c------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 89999875432 234455 331 01111100 0 0023443 334688999886 3457888887665
Q ss_pred E
Q 041651 254 V 254 (557)
Q Consensus 254 W 254 (557)
.
T Consensus 225 ~ 225 (270)
T 1rwi_B 225 S 225 (270)
T ss_dssp C
T ss_pred c
Confidence 3
No 157
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.17 E-value=0.78 Score=45.05 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=18.7
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 124 SVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 124 ~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
++-+||+.+++|+.+ ..+++||..
T Consensus 20 ~~s~~g~~lasgs~D---~~v~lwd~~ 43 (316)
T 3bg1_A 20 QMDYYGTRLATCSSD---RSVKIFDVR 43 (316)
T ss_dssp EECGGGCEEEEEETT---TEEEEEEEE
T ss_pred eEcCCCCEEEEEeCC---CeEEEEEec
Confidence 344689999999863 579999976
No 158
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.02 E-value=3.4 Score=40.95 Aligned_cols=108 Identities=14% Similarity=0.244 Sum_probs=55.0
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec---CCcEEEEcCcCCCceeEe-cC
Q 041651 123 GSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP---DGRIIIIGGRRQFNYEFY-PK 197 (557)
Q Consensus 123 ~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~---dG~vyvvGG~~~~~~E~y-P~ 197 (557)
....+ ++.++++|+.+ ..+.+||.. +.+-... +.......+....+ ++.++++|+.++ .+.+| ..
T Consensus 105 ~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~ 174 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFD---KTLKVWDTN---TLQTADV---FNFEETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDLK 174 (408)
T ss_dssp EEECTTCTTCEEEEETT---SEEEEEETT---TTEEEEE---EECSSCEEEEEECSSCSSCCEEEEEESSS-SEEEEESS
T ss_pred EEEccCCCcEEEEEeCC---CeEEEeeCC---CCcccee---ccCCCceeeeEeecCCCCCcEEEEEcCCC-eEEEEeCC
Confidence 34455 77788888763 579999987 4432221 11222222333343 455788777654 34555 32
Q ss_pred CCCCCCCCceeeecccccccccccCCccceEEEeeCCc-EEEEEcC--ceEEEeCCCCe
Q 041651 198 SDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGN-LFIFANT--RSILFDYKQNK 253 (557)
Q Consensus 198 ~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~-ifv~gg~--~~~~yDp~t~~ 253 (557)
. + ..-..+. ... ..--.+...++|+ +++.|+. ...+||..+..
T Consensus 175 ~--~---~~~~~~~---~~~-----~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 175 S--G---SCSHILQ---GHR-----QEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp S--S---CCCEEEC---CCC-----SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred C--c---ceeeeec---CCC-----CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 1 0 0001111 000 0011234456777 7877764 46789987653
No 159
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.01 E-value=6.4 Score=37.97 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=39.7
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc-eecCCcccccccCcceEEEecCCc-EEEEcCcCCCceeEe
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCD-WIELPQHLSERRWYATNQILPDGR-IIIIGGRRQFNYEFY 195 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~-W~~~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y 195 (557)
+.+..++|+.+++|+.+ ..+++||.. +.+ .............-.+++..++|+ .+++|+.++ .+.+|
T Consensus 16 ~~~~s~~~~~l~~~~~d---~~v~iw~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~w 84 (342)
T 1yfq_A 16 DIKIIPSKSLLLITSWD---GSLTVYKFD---IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKV 84 (342)
T ss_dssp EEEEEGGGTEEEEEETT---SEEEEEEEE---TTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS-CEEEE
T ss_pred EEEEcCCCCEEEEEcCC---CeEEEEEeC---CCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC-eEEEE
Confidence 34555688888888753 578899876 333 111111122233344566667899 888888654 45556
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.97 E-value=7.8 Score=38.50 Aligned_cols=48 Identities=8% Similarity=-0.013 Sum_probs=30.2
Q ss_pred EEEEECCCCcEEECccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 99 SILYDVATNAYRPLMVQ---TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
+..+|+++++.+.+... ....+...++-+||+.+.++... .+.+||..
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~~ 68 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAVK 68 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEEE
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEEC
Confidence 45678888888766432 11234455667899866555542 68888864
No 161
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.88 E-value=9.7 Score=41.78 Aligned_cols=116 Identities=11% Similarity=0.071 Sum_probs=66.1
Q ss_pred EEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEE
Q 041651 55 QLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQS 134 (557)
Q Consensus 55 ~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~ 134 (557)
...|+|+.+++..... |. -...+.++|..+++.............+.+..+||+.++.
T Consensus 127 ~~SPDG~~la~~~~~~---------G~-------------~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPN---------AA-------------DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYY 184 (695)
T ss_dssp EECTTSSEEEEEEEET---------TC-------------SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEE
T ss_pred EECCCCCEEEEEECCC---------CC-------------ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEE
Confidence 4457998888876432 21 0135889999999875111122221245677789998888
Q ss_pred cCCCCC----------CCeEEEEcCCCCCCCcee--cCCcccccccCcceEEEecCCcEEEEcCcCC-CceeEe
Q 041651 135 GGYNDG----------DHVVRTFTPCDDDQCDWI--ELPQHLSERRWYATNQILPDGRIIIIGGRRQ-FNYEFY 195 (557)
Q Consensus 135 GG~~~g----------~~~v~~ydp~~~~t~~W~--~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~-~~~E~y 195 (557)
+..... ...+++++.. +..-. .+-..-....+..+...-+||+.+++...+. .+.++|
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~---t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLG---TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETT---SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEecCCCCCccccCCCCCEEEEEECC---CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 765321 2458888876 33311 1101001234556667778998777766544 445665
No 162
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.85 E-value=2.2 Score=41.67 Aligned_cols=29 Identities=17% Similarity=0.404 Sum_probs=21.3
Q ss_pred Eee-CCcEEEEEcC--ceEEEeCCCCeEEEEe
Q 041651 230 LLP-DGNLFIFANT--RSILFDYKQNKVLKEY 258 (557)
Q Consensus 230 ~~~-~G~ifv~gg~--~~~~yDp~t~~W~~~~ 258 (557)
..+ ++++++.|+. ...+||..+.+....+
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 445 8888888874 4788999988765433
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.82 E-value=7.3 Score=37.62 Aligned_cols=86 Identities=13% Similarity=-0.001 Sum_probs=47.4
Q ss_pred eEEEEECCCCcEEECcc-CC-----CcccccCeecCCCcEEEEcCCC---------CCCCeEEEEcCCCCCCCceecCCc
Q 041651 98 HSILYDVATNAYRPLMV-QT-----DTWCSSGSVLPNGTLVQSGGYN---------DGDHVVRTFTPCDDDQCDWIELPQ 162 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~-~~-----~~~c~~~~~l~dG~i~v~GG~~---------~g~~~v~~ydp~~~~t~~W~~~~~ 162 (557)
.+.+||+.+++...... .. .....+.++.+||+.+++++.. .....+.+||.. +.+-.....
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~~~~ 142 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA---DGLEAKPVR 142 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG---GGGGBCCSE
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC---Cccccceee
Confidence 37889999887653222 11 1112344666799877777632 012578999987 422211111
Q ss_pred ccccccCcceEEEecCCcEEEEcC
Q 041651 163 HLSERRWYATNQILPDGRIIIIGG 186 (557)
Q Consensus 163 ~m~~~R~y~s~~~L~dG~vyvvGG 186 (557)
....++.-.+++.-+||++|+.++
T Consensus 143 ~~~~~~~~~~~~~s~dg~l~~~~~ 166 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDGSLYVAGP 166 (349)
T ss_dssp EEECCSSCCCEEECTTSCEEEESS
T ss_pred eccCCCcccceeECCCCcEEEccC
Confidence 123334344555667999877544
No 164
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.66 E-value=8 Score=39.00 Aligned_cols=25 Identities=20% Similarity=0.183 Sum_probs=19.3
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 123 GSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 123 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.++-+||+++++|+.+ ..+++||..
T Consensus 34 v~~s~~g~~la~g~~d---g~v~iw~~~ 58 (447)
T 3dw8_B 34 VEFNHSGELLATGDKG---GRVVIFQQE 58 (447)
T ss_dssp EEECSSSSEEEEEETT---SEEEEEEEC
T ss_pred EEECCCCCEEEEEcCC---CeEEEEEec
Confidence 4455799999999873 578888876
No 165
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.42 E-value=8.8 Score=37.62 Aligned_cols=82 Identities=11% Similarity=0.191 Sum_probs=45.7
Q ss_pred EEEEECCCCcE-----EECcc--CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCc
Q 041651 99 SILYDVATNAY-----RPLMV--QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWY 170 (557)
Q Consensus 99 ~~~yDp~t~~w-----~~l~~--~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y 170 (557)
+.+||..+.+- .+... .+.......++.++++++++|+.+ ..+++||.. +.+... . +. ....-
T Consensus 51 v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D---~~v~lwd~~---~~~~~~--~-~~~h~~~v 121 (343)
T 2xzm_R 51 VMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD---KTLRLWDLR---TGTTYK--R-FVGHQSEV 121 (343)
T ss_dssp EEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT---SEEEEEETT---SSCEEE--E-EECCCSCE
T ss_pred EEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC---CcEEEEECC---CCcEEE--E-EcCCCCcE
Confidence 67888764321 11111 222233334556799999999873 589999987 443211 1 21 12223
Q ss_pred ceEEEecCCcEEEEcCcCC
Q 041651 171 ATNQILPDGRIIIIGGRRQ 189 (557)
Q Consensus 171 ~s~~~L~dG~vyvvGG~~~ 189 (557)
.+++.-+||+.++.||.+.
T Consensus 122 ~~v~~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAER 140 (343)
T ss_dssp EEEEECSSTTEEEEEETTS
T ss_pred EEEEECCCCCEEEEEcCCC
Confidence 3455556788777777553
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.24 E-value=7.9 Score=36.96 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=75.3
Q ss_pred eEEEEECCCCcEEECccC----CCcccccCeecCCCcEEEE----cCCC----------CCCCeEEEEcCCCCCCCceec
Q 041651 98 HSILYDVATNAYRPLMVQ----TDTWCSSGSVLPNGTLVQS----GGYN----------DGDHVVRTFTPCDDDQCDWIE 159 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~i~v~----GG~~----------~g~~~v~~ydp~~~~t~~W~~ 159 (557)
.+.+||+.+++++.+... ...+....++.++|++|++ |... .+...+.+||+. . +...
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g-~~~~ 166 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---G-TLSA 166 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---S-CEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---C-CEEE
Confidence 478899988888766431 1122335667789999997 4310 112478888885 2 2222
Q ss_pred CCcccccccCcceEEEecCCcEEEEcCcCCCceeEecCCCCCCCCCce-eeecccccccccccCCccce-EEEeeCCcEE
Q 041651 160 LPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQT-FMLHFLLETRDYAENNLYPF-VHLLPDGNLF 237 (557)
Q Consensus 160 ~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w-~~~~~l~~t~d~~~~~~yp~-~~~~~~G~if 237 (557)
+...+. .-.+.+.-+||+++ +.......+..|..... ... .....+ .. ...+|. +..-++|+||
T Consensus 167 ~~~~~~---~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~----g~~~~~~~~~-~~-----~~~~p~~i~~d~~G~l~ 232 (296)
T 3e5z_A 167 PIRDRV---KPNGLAFLPSGNLL-VSDTGDNATHRYCLNAR----GETEYQGVHF-TV-----EPGKTDGLRVDAGGLIW 232 (296)
T ss_dssp EECCCS---SEEEEEECTTSCEE-EEETTTTEEEEEEECSS----SCEEEEEEEE-CC-----SSSCCCSEEEBTTSCEE
T ss_pred eecCCC---CCccEEECCCCCEE-EEeCCCCeEEEEEECCC----CcCcCCCeEe-eC-----CCCCCCeEEECCCCCEE
Confidence 211122 22345666789988 54444445556622101 122 101111 00 011232 3455799999
Q ss_pred EEEcCceEEEeCCCCeE
Q 041651 238 IFANTRSILFDYKQNKV 254 (557)
Q Consensus 238 v~gg~~~~~yDp~t~~W 254 (557)
+..+....+||+.....
T Consensus 233 v~~~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 233 ASAGDGVHVLTPDGDEL 249 (296)
T ss_dssp EEETTEEEEECTTSCEE
T ss_pred EEcCCeEEEECCCCCEE
Confidence 98877788999985443
No 167
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.21 E-value=4.2 Score=40.01 Aligned_cols=139 Identities=11% Similarity=0.107 Sum_probs=76.5
Q ss_pred EEEEECCCCcEEECcc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcee--cCCcccccccCcceEEE
Q 041651 99 SILYDVATNAYRPLMV-QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWI--ELPQHLSERRWYATNQI 175 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~--~~~~~m~~~R~y~s~~~ 175 (557)
+.+||..+++-..... .+...+.+.++-+||.++++|+.+ ..+++||.. +.+-. .+. ..+...-.+++.
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~---~~~~~~~~~~--~~h~~~v~~l~f 222 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS---SPDQASSRFP--VDEEAKIKEVKF 222 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS---CTTSCCEECC--CCTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC---CCCCCccEEe--ccCCCCEEEEEE
Confidence 7899998887654332 223234445677899999999863 579999988 43321 111 112233345556
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE---cCceEEEeC--
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA---NTRSILFDY-- 249 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g---g~~~~~yDp-- 249 (557)
-+||+.++.|+ +. .+.+| .... ..-..+..... .. ..... ..+...++|+.++.+ ++...+|+.
T Consensus 223 s~~g~~l~s~~-~~-~v~iwd~~~~-----~~~~~~~~~~~-~~-~~~~~-~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQ-TVVCFDLRKD-----VGTLAYPTYTI-PE-FKTGT-VTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp CTTSSEEEEEE-SS-BEEEEETTSS-----TTCBSSCCCBC-------CC-EEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred eCCCCEEEEEe-CC-eEEEEEcCCC-----Ccceeeccccc-cc-ccccc-eEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 67999999988 33 67777 3311 01000110000 00 00000 124456789988883 345667766
Q ss_pred CCCeEE
Q 041651 250 KQNKVL 255 (557)
Q Consensus 250 ~t~~W~ 255 (557)
....|.
T Consensus 293 ~~~~~~ 298 (343)
T 3lrv_A 293 KTKNWT 298 (343)
T ss_dssp TTCSEE
T ss_pred cccceE
Confidence 456676
No 168
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.12 E-value=2.7 Score=40.94 Aligned_cols=112 Identities=12% Similarity=0.125 Sum_probs=60.5
Q ss_pred cCeecCC---CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEcCcCCCceeEe-c
Q 041651 122 SGSVLPN---GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIGGRRQFNYEFY-P 196 (557)
Q Consensus 122 ~~~~l~d---G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P 196 (557)
+.++-++ |+++++|+.+ ..+++||.. +........ +. ....-.+++..+||+.++.|+.++ .+.+| .
T Consensus 44 ~~~~~~~~~~g~~l~~~~~d---g~i~iw~~~---~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~ 115 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSWA---NDVRCWEVQ---DSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASCDK-TAKMWDL 115 (368)
T ss_dssp EEEECCTTSSSEEEEEEETT---SEEEEEEEC---TTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTS-EEEEEET
T ss_pred EEEEcCCCCCceEEEEECCC---CcEEEEEcC---CCCceeEEE-eccccCCEEEEEECcCCCEEEEEcCCC-cEEEEEc
Confidence 3445566 6999999863 578999987 322221111 22 222234455667899998887654 45566 3
Q ss_pred CCCCCCCCCceeeecccccccccccCCccceEEE--eeCCcEEEEEcC--ceEEEeCCCCeEE
Q 041651 197 KSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHL--LPDGNLFIFANT--RSILFDYKQNKVL 255 (557)
Q Consensus 197 ~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~--~~~G~ifv~gg~--~~~~yDp~t~~W~ 255 (557)
.. ...... . ... .... .+.. .++|++++.|+. ...+||..+.+-.
T Consensus 116 ~~------~~~~~~--~-~~~----~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 116 SS------NQAIQI--A-QHD----APVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp TT------TEEEEE--E-ECS----SCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred CC------CCceee--c-ccc----CceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 21 111111 0 000 0001 1222 568888888874 4678998776543
No 169
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.99 E-value=7.8 Score=38.47 Aligned_cols=59 Identities=15% Similarity=0.172 Sum_probs=37.8
Q ss_pred EEEcCCCeEEEEcCcCCCCCCcccCCCCccc-cEEEcCCCCCCCce-EecC-CCCCcccccccceeccCCcEEEecCCCC
Q 041651 345 MILLPNGDVIIINGAQLGTAGWELARGPMTR-PIIYRPSEQTSRRF-SVME-PSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 345 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~-~e~YDP~t~~g~~W-~~~~-~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
...-|||++++.|+.+ + + +.+||..+. +- ..+. ....... ......|||+.+++|+.+.
T Consensus 201 ~~~s~~g~~l~s~s~d-~------------~~v~iwd~~~~---~~~~~~~~g~h~~~v--~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQD-G------------TIIRVFKTEDG---VLVREFRRGLDRADV--VDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp EEECTTSSEEEEEETT-C------------SEEEEEETTTC---CEEEEEECTTCCSCE--EEEEECTTSCEEEEEETTC
T ss_pred EEECCCCCEEEEEeCC-C------------CEEEEEECCCC---cEEEEEEcCCCCCcE--EEEEECCCCCEEEEEECCC
Confidence 3456899999998765 2 5 799999876 32 2222 1011122 1245679999999998754
No 170
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.76 E-value=4.1 Score=39.63 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=51.0
Q ss_pred eEEEEECCC-CcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVAT-NAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t-~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+.+||..+ .+....-..+.....+.+..++|+.+++|+.+ ..+.+||.. +.+... . +.......+++..
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~---~~~~~~--~-~~~~~~~~~~~~~ 268 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD---TNSFLVDVS---TLQVLK--K-YETDCPLNTAVIT 268 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEE--E-EECSSCEEEEEEC
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC---ceEEEEECC---CCceee--e-ecCCCCceeEEec
Confidence 377899887 33322222223333345566799999998763 579999987 433221 1 2233334556677
Q ss_pred cCCcEEEEcCcCC
Q 041651 177 PDGRIIIIGGRRQ 189 (557)
Q Consensus 177 ~dG~vyvvGG~~~ 189 (557)
++|+.+++|+.+.
T Consensus 269 ~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 269 PLKEFIILGGGQE 281 (369)
T ss_dssp SSSSEEEEEECCC
T ss_pred CCCceEEEeecCC
Confidence 8899999988654
No 171
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.95 E-value=12 Score=36.23 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=43.4
Q ss_pred eeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCc
Q 041651 51 AMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGT 130 (557)
Q Consensus 51 ~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ 130 (557)
+...++-++|++|+.+... + .+..||+.++. ....... ..-.+.++..+|+
T Consensus 34 pegia~~~~g~lyv~d~~~----------~-----------------~I~~~d~~g~~-~~~~~~~-~~p~gia~~~dG~ 84 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEV----------G-----------------EIVSITPDGNQ-QIHATVE-GKVSGLAFTSNGD 84 (306)
T ss_dssp EEEEEECTTSCEEEEETTT----------T-----------------EEEEECTTCCE-EEEEECS-SEEEEEEECTTSC
T ss_pred cceEEECCCCCEEEEeCCC----------C-----------------eEEEECCCCce-EEEEeCC-CCceeEEEcCCCc
Confidence 4445555789998876321 2 26778887643 2221111 1223455667999
Q ss_pred EEEEcCCCCCCCeEEEEcCCCCCCCceecCC
Q 041651 131 LVQSGGYNDGDHVVRTFTPCDDDQCDWIELP 161 (557)
Q Consensus 131 i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~ 161 (557)
+|++....+ ...+..||+. +.+...+.
T Consensus 85 l~vad~~~~-~~~v~~~d~~---~g~~~~~~ 111 (306)
T 2p4o_A 85 LVATGWNAD-SIPVVSLVKS---DGTVETLL 111 (306)
T ss_dssp EEEEEECTT-SCEEEEEECT---TSCEEEEE
T ss_pred EEEEeccCC-cceEEEEcCC---CCeEEEEE
Confidence 998764311 1357778877 55554443
No 172
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.68 E-value=12 Score=35.75 Aligned_cols=163 Identities=11% Similarity=-0.071 Sum_probs=86.8
Q ss_pred cceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccC-CCcccccCeecC
Q 041651 49 ISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQ-TDTWCSSGSVLP 127 (557)
Q Consensus 49 ~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~ 127 (557)
..--|...+.++++|+-.|.. |+ ..+..+|++|++...-... ...|..+.+. .
T Consensus 20 ~~ftqGL~~~~~~LyestG~~----------g~---------------S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~-~ 73 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGET----------GR---------------SSVRKVDLETGRILQRAEVPPPYFGAGIVA-W 73 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCT----------TS---------------CEEEEEETTTCCEEEEEECCTTCCEEEEEE-E
T ss_pred ccccccEEEECCEEEEECCCC----------CC---------------ceEEEEECCCCCEEEEEeCCCCcceeEEEE-e
Confidence 444566677778877654431 21 2478999999998654333 3445554444 4
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCc
Q 041651 128 NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQ 206 (557)
Q Consensus 128 dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~ 206 (557)
+++||++... .+.+.+||+. +-+- +.. .+.+...-+.+.- ++++|+.=|+ ....++ |.+. ..
T Consensus 74 ~~~ly~ltw~---~~~v~v~D~~---tl~~--~~t-i~~~~~Gwglt~d-g~~L~vSdgs--~~l~~iDp~t~-----~~ 136 (243)
T 3mbr_X 74 RDRLIQLTWR---NHEGFVYDLA---TLTP--RAR-FRYPGEGWALTSD-DSHLYMSDGT--AVIRKLDPDTL-----QQ 136 (243)
T ss_dssp TTEEEEEESS---SSEEEEEETT---TTEE--EEE-EECSSCCCEEEEC-SSCEEEECSS--SEEEEECTTTC-----CE
T ss_pred CCEEEEEEee---CCEEEEEECC---cCcE--EEE-EeCCCCceEEeeC-CCEEEEECCC--CeEEEEeCCCC-----eE
Confidence 7899998644 3689999998 4332 211 2222222233322 4567776553 234455 6521 01
Q ss_pred eeeecccccccccccCCccceEEEeeCCcEEEEE--cCceEEEeCCCCeEEEEe
Q 041651 207 TFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA--NTRSILFDYKQNKVLKEY 258 (557)
Q Consensus 207 w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g--g~~~~~yDp~t~~W~~~~ 258 (557)
-...+. ..+..+ -.+.--....+|+||+.- .+...+.||++++....+
T Consensus 137 ~~~I~V---~~~g~~-~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 137 VGSIKV---TAGGRP-LDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEEEEC---EETTEE-CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred EEEEEE---ccCCcc-cccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 111111 000000 001111223499999765 345678999999877544
No 173
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.57 E-value=12 Score=35.66 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=70.2
Q ss_pred eEEEEECCCCcEEECccCCCc--ccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc----ccCc
Q 041651 98 HSILYDVATNAYRPLMVQTDT--WCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE----RRWY 170 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~----~R~y 170 (557)
.+.+||+.+++....-..... ...+.++.+||+ +|+.+.. ...+.+||.. +.+-...-. +.. ...-
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~ 84 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV---TGETLGRID-LSTPEERVKSL 84 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT---TCCEEEEEE-CCBTTEEEECT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC---CCCeEeeEE-cCCcccccccc
Confidence 377888888765432221111 233456667885 5566543 2579999987 444321101 111 1123
Q ss_pred ceEEEecCCcEEEEcCc-----------CCCceeEe-cCCCCCCCCCcee-eecccccccccccCCccc-eEEEeeCCcE
Q 041651 171 ATNQILPDGRIIIIGGR-----------RQFNYEFY-PKSDEDLSFPQTF-MLHFLLETRDYAENNLYP-FVHLLPDGNL 236 (557)
Q Consensus 171 ~s~~~L~dG~vyvvGG~-----------~~~~~E~y-P~~~~~~~~~~w~-~~~~l~~t~d~~~~~~yp-~~~~~~~G~i 236 (557)
..++.-+||+.++++.. ....+.+| ... .+.. ..+. ...| .+...+||+.
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~------~~~~~~~~~----------~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET------LSRRKAFEA----------PRQITMLAWARDGSK 148 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT------TEEEEEEEC----------CSSCCCEEECTTSSC
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCC------CcEEEEEeC----------CCCcceeEECCCCCE
Confidence 34566678854444421 12344455 321 1111 1111 0012 2345678984
Q ss_pred EEEEcCceEEEeCCCCeEEEEe
Q 041651 237 FIFANTRSILFDYKQNKVLKEY 258 (557)
Q Consensus 237 fv~gg~~~~~yDp~t~~W~~~~ 258 (557)
+++++....+||..+.+....+
T Consensus 149 l~~~~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 149 LYGLGRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EEEESSSEEEEETTTTEEEEEE
T ss_pred EEEeCCeEEEEECCCCcEeeee
Confidence 4455777889999998765434
No 174
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.42 E-value=4.6 Score=40.28 Aligned_cols=136 Identities=8% Similarity=0.052 Sum_probs=68.9
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcee-cCCcccccc-cCcceEE
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNG-TLVQSGGYNDGDHVVRTFTPCDDDQCDWI-ELPQHLSER-RWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG-~i~v~GG~~~g~~~v~~ydp~~~~t~~W~-~~~~~m~~~-R~y~s~~ 174 (557)
.+.+||..+++-...-..+.....+.++.+++ .+++.|+.+ ..+++||.. +.+-. .+. .... ....+++
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~---~~~~~~~~~--~~~~~~~~~~~~ 221 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR---CPKPASQIG--CSAPGYLPTSLA 221 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT---SSSCEEECC------CCCEEEEE
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc---ccceeeeee--cceeeccceeee
Confidence 47899998876543322232222234455666 588888763 579999987 43322 111 1111 1112333
Q ss_pred Eec-CCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCC-cEEEEEcC--ceEEEeC
Q 041651 175 ILP-DGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDG-NLFIFANT--RSILFDY 249 (557)
Q Consensus 175 ~L~-dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G-~ifv~gg~--~~~~yDp 249 (557)
..+ ++++++.|+.++ .+.+| ... + ..-..+ ....+ .--.+...++| ++++.|+. ...+||.
T Consensus 222 ~~p~~~~~l~sg~~dg-~v~~wd~~~--~---~~~~~~---~~h~~-----~v~~v~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENG-TVSLVDTKS--T---SCVLSS---AVHSQ-----CVTGLVFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp ECSSCTTEEEEEETTS-EEEEEESCC-------CCEEE---ECCSS-----CEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred ecCCCCcceEEeccCC-cEEEEECCC--C---cEEEEE---cCCCC-----CEEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence 344 567888887654 45666 331 1 010111 11000 00122334677 56666764 4678998
Q ss_pred CCCeEE
Q 041651 250 KQNKVL 255 (557)
Q Consensus 250 ~t~~W~ 255 (557)
.+.+-.
T Consensus 288 ~~~~~~ 293 (344)
T 4gqb_B 288 SLSELF 293 (344)
T ss_dssp TCCEEE
T ss_pred CCCcEE
Confidence 887654
No 175
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=90.33 E-value=14 Score=35.87 Aligned_cols=68 Identities=10% Similarity=0.061 Sum_probs=41.4
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE--cCceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA--NTRSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g--g~~~~~yDp~t~~ 253 (557)
.++++|+..|.++. +..+ +++ + ..-... +. ...|.......+++||+.. ++...+||+++.+
T Consensus 63 ~~~~Ly~stG~~g~-v~~iD~~T--g---kv~~~~--l~-------~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 63 HQGHFFESTGHQGT-LRQLSLES--A---QPVWME--RL-------GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp ETTEEEEEETTTTE-EEECCSSC--S---SCSEEE--EC-------TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred ECCEEEEEcCCCCE-EEEEECCC--C---cEEeEE--CC-------CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 37899999887654 5555 542 1 011111 11 1223333455577899987 4568899999998
Q ss_pred EEEEec
Q 041651 254 VLKEYP 259 (557)
Q Consensus 254 W~~~~p 259 (557)
....++
T Consensus 128 ~~~ti~ 133 (268)
T 3nok_A 128 RERTTR 133 (268)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876664
No 176
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.16 E-value=9.5 Score=38.88 Aligned_cols=26 Identities=19% Similarity=0.100 Sum_probs=19.0
Q ss_pred cCeecCCCc-EEEEcCCCCCCCeEEEEcCC
Q 041651 122 SGSVLPNGT-LVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 122 ~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~ 150 (557)
+.+..+++. ++++|+.. ..+.+||..
T Consensus 186 ~l~~~~~~~~~l~s~~~d---g~i~vwd~~ 212 (430)
T 2xyi_A 186 GLSWNPNLNGYLLSASDD---HTICLWDIN 212 (430)
T ss_dssp CEEECTTSTTEEEEECTT---SCEEEEETT
T ss_pred EEEeCCCCCCeEEEEeCC---CeEEEEeCC
Confidence 445566777 88888763 568999987
No 177
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.05 E-value=18 Score=36.85 Aligned_cols=140 Identities=13% Similarity=0.086 Sum_probs=74.3
Q ss_pred EEEEECC--CCcEEEC-cc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceec-CCcccc-cccCcce
Q 041651 99 SILYDVA--TNAYRPL-MV-QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIE-LPQHLS-ERRWYAT 172 (557)
Q Consensus 99 ~~~yDp~--t~~w~~l-~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~-~~~~m~-~~R~y~s 172 (557)
+.+||.. +++.... .. .....+.+.+..++|+.+++|+.. ..++.||.. +.+... ....+. ....-.+
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~---~~~~~~~~~~~~~~h~~~v~~ 200 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDIN---SIPEEKFTQEPILGHVSMLTD 200 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---SCCCSSCCCCCSEECSSCEEE
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecC---CcccccccceeeecccCceEE
Confidence 7788887 5543322 11 122333345667899999998762 468888876 322211 000122 2223344
Q ss_pred EEEecC---CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCc--eEE
Q 041651 173 NQILPD---GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTR--SIL 246 (557)
Q Consensus 173 ~~~L~d---G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~--~~~ 246 (557)
++.-+| |+.++.|+.+. .+.+| ... + ... ..++.... .... .+... +|++++.|+.+ ..+
T Consensus 201 ~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~--~----~~~-~~~~~~h~----~~v~-~~~~s-d~~~l~s~~~d~~v~v 266 (450)
T 2vdu_B 201 VHLIKDSDGHQFIITSDRDE-HIKISHYPQ--C----FIV-DKWLFGHK----HFVS-SICCG-KDYLLLSAGGDDKIFA 266 (450)
T ss_dssp EEEEECTTSCEEEEEEETTS-CEEEEEESC--T----TCE-EEECCCCS----SCEE-EEEEC-STTEEEEEESSSEEEE
T ss_pred EEEcCCCCCCcEEEEEcCCC-cEEEEECCC--C----cee-eeeecCCC----CceE-EEEEC-CCCEEEEEeCCCeEEE
Confidence 566678 88888888664 45566 321 1 111 00010100 0001 12233 89988888754 678
Q ss_pred EeCCCCeEEEEe
Q 041651 247 FDYKQNKVLKEY 258 (557)
Q Consensus 247 yDp~t~~W~~~~ 258 (557)
||..+.+....+
T Consensus 267 wd~~~~~~~~~~ 278 (450)
T 2vdu_B 267 WDWKTGKNLSTF 278 (450)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEeeee
Confidence 999988765444
No 178
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.76 E-value=13 Score=34.82 Aligned_cols=131 Identities=10% Similarity=-0.037 Sum_probs=68.5
Q ss_pred EEEEECCCCcEEECccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
+..||+. ++++..... ......+.++..+|++|+.... ...+.+||+. .+..... ++ ....-.+.+.-
T Consensus 85 v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~----g~~~~~~--~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD----GTIYEYD--LPNKGSYPAFITLG 154 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT----SCEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC----CCEEEcc--CCCCCCCceeEEEC
Confidence 6788887 677654332 1122334455678999988643 2468889986 2222211 11 11222344555
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEE-EeeCCcEEEEEc--CceEEEeCCCC
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVH-LLPDGNLFIFAN--TRSILFDYKQN 252 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~-~~~~G~ifv~gg--~~~~~yDp~t~ 252 (557)
++|++|+.... ...+..| +. .+....... . ...+|... .-++|+||+... ....+||+ ++
T Consensus 155 ~~g~l~v~~~~-~~~i~~~~~~-------g~~~~~~~~-~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 155 SDNALWFTENQ-NNSIGRITNT-------GKLEEYPLP-T------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp TTSSEEEEETT-TTEEEEECTT-------CCEEEEECS-S------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCEEEEecC-CCeEEEECCC-------CcEEEeeCC-C------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 78999886532 2234444 32 122211110 0 01234433 345899998763 35788998 55
Q ss_pred eEE
Q 041651 253 KVL 255 (557)
Q Consensus 253 ~W~ 255 (557)
++.
T Consensus 219 ~~~ 221 (300)
T 2qc5_A 219 EIS 221 (300)
T ss_dssp CEE
T ss_pred cEE
Confidence 554
No 179
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.27 E-value=11 Score=36.20 Aligned_cols=145 Identities=12% Similarity=0.095 Sum_probs=74.5
Q ss_pred EEEEECCCCcEEECccC----CCcccccCeecCCCcEEEEc-CCC-------CCCCeEEEEcCCCCCCCceecCCccccc
Q 041651 99 SILYDVATNAYRPLMVQ----TDTWCSSGSVLPNGTLVQSG-GYN-------DGDHVVRTFTPCDDDQCDWIELPQHLSE 166 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~i~v~G-G~~-------~g~~~v~~ydp~~~~t~~W~~~~~~m~~ 166 (557)
+..||+++++++.+... ...+....++.++|++|+.. +.. .....+.++|+. . +...+...+..
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g-~~~~~~~~~~~ 150 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---H-HVKKYFDQVDI 150 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---S-CEEEEEEEESB
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---C-CEEEEeecccc
Confidence 67899999988876532 12334456677899988853 110 112367788875 2 22222111222
Q ss_pred ccCcceEEEecCCc-EEEEcCcCCCceeEecCC-CCCCCCCceeeecccccccccccCCccceEE-EeeCCcEEEEE--c
Q 041651 167 RRWYATNQILPDGR-IIIIGGRRQFNYEFYPKS-DEDLSFPQTFMLHFLLETRDYAENNLYPFVH-LLPDGNLFIFA--N 241 (557)
Q Consensus 167 ~R~y~s~~~L~dG~-vyvvGG~~~~~~E~yP~~-~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~-~~~~G~ifv~g--g 241 (557)
-.+.+.-+||+ +|++... ...+..|... .++ ........... .....+|... +-++|+||+.. +
T Consensus 151 ---pngi~~spdg~~lyv~~~~-~~~i~~~~~d~~~G----~~~~~~~~~~~---~~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 151 ---SNGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQTG----QISNRRSVYKL---EKEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp ---EEEEEECTTSCEEEEEEGG-GTEEEEEEECTTTC----CEEEEEEEEEC---CGGGCEEEEEEEBTTSCEEEEEETT
T ss_pred ---ccceEEcCCCCEEEEecCC-CCcEEEEeccCCCC----cccCcEEEEEC---CCCCCCCCeeEECCCCCEEEEEcCC
Confidence 23456667886 5665432 2334444210 011 11100000000 0011244443 34689999885 3
Q ss_pred CceEEEeCCCCeEEEEe
Q 041651 242 TRSILFDYKQNKVLKEY 258 (557)
Q Consensus 242 ~~~~~yDp~t~~W~~~~ 258 (557)
....+||+++++....+
T Consensus 220 ~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TEEEEECTTTCCEEEEE
T ss_pred CEEEEEcCCCceEEEEE
Confidence 45889999988765444
No 180
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.59 E-value=30 Score=37.44 Aligned_cols=89 Identities=8% Similarity=0.052 Sum_probs=50.2
Q ss_pred ceEEEEECCC-----CcEEECccCCCc-c-------------cccCeecCCCcEEEEcCCC-------------------
Q 041651 97 AHSILYDVAT-----NAYRPLMVQTDT-W-------------CSSGSVLPNGTLVQSGGYN------------------- 138 (557)
Q Consensus 97 ~~~~~yDp~t-----~~w~~l~~~~~~-~-------------c~~~~~l~dG~i~v~GG~~------------------- 138 (557)
..+.+||..+ ++...+...... . ..+...-+||+.++++..+
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 3578899988 777766443221 0 2344566899988887521
Q ss_pred -----------CCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcC
Q 041651 139 -----------DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRR 188 (557)
Q Consensus 139 -----------~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~ 188 (557)
.+...+.+||.. +.+-..+...........+++.-+||+.++++..+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLA---TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETT---TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EEeeCCCCCCCCCeeEEEEEECC---CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 122468888887 54433332101122222345556799876665543
No 181
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.42 E-value=35 Score=37.93 Aligned_cols=256 Identities=11% Similarity=0.050 Sum_probs=124.5
Q ss_pred EEEEECCCCcEEECccCC--------CcccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCceecCCc---cccc
Q 041651 99 SILYDVATNAYRPLMVQT--------DTWCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ---HLSE 166 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~--------~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~---~m~~ 166 (557)
+..||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... .+..
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~---~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN---SGQVENFNQRNSQLVN 451 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT---TCCEEEECTTTSCCSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC---CCcEEEeecCCCCcCC
Confidence 678899988887664211 11122233346788 665 3332 347889998 666655431 1221
Q ss_pred ccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceE
Q 041651 167 RRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSI 245 (557)
Q Consensus 167 ~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~ 245 (557)
. .-.+.+.-.+|++++... . ..-+| |.+ .++......... .....+..-....-.+|+|++.......
T Consensus 452 ~-~v~~i~~d~~g~lwigt~-~--Gl~~~~~~~------~~~~~~~~~~~~-~~~~~~~i~~i~~d~~g~lWigt~~Gl~ 520 (795)
T 4a2l_A 452 E-NVYAILPDGEGNLWLGTL-S--ALVRFNPEQ------RSFTTIEKEKDG-TPVVSKQITTLFRDSHKRLWIGGEEGLS 520 (795)
T ss_dssp S-CEEEEEECSSSCEEEEES-S--CEEEEETTT------TEEEECCBCTTC-CBCCCCCEEEEEECTTCCEEEEESSCEE
T ss_pred C-eeEEEEECCCCCEEEEec-C--ceeEEeCCC------CeEEEccccccc-cccCCceEEEEEECCCCCEEEEeCCceE
Confidence 1 223344445688887542 2 23345 542 133322110000 0000011112233457899987766678
Q ss_pred EEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEec
Q 041651 246 LFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVS 325 (557)
Q Consensus 246 ~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~ 325 (557)
+||++++++ . ....... ...+......++. + .+|+|++.... +- ..|++.......|+..
T Consensus 521 ~~~~~~~~~-~-~~~~~~~--~~l~~~~i~~i~~---d-----~~g~lWigT~~--Gl------~~~d~~~~~~~~~~~~ 580 (795)
T 4a2l_A 521 VFKQEGLDI-Q-KASILPV--SNVTKLFTNCIYE---A-----SNGIIWVGTRE--GF------YCFNEKDKQIKRYNTT 580 (795)
T ss_dssp EEEEETTEE-E-ECCCSCS--CGGGGSCEEEEEE---C-----TTSCEEEEESS--CE------EEEETTTTEEEEECGG
T ss_pred EEeCCCCeE-E-EecCCCC--CCCCCCeeEEEEE---C-----CCCCEEEEeCC--Cc------eeECCCCCcEEEeCCC
Confidence 899998887 3 3211000 0011001111211 0 16777775321 21 2344444433333211
Q ss_pred CCCCcceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCC---CCCccccc
Q 041651 326 HANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEP---STRPRMYH 402 (557)
Q Consensus 326 ~~~~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~---~~~~R~yh 402 (557)
+ .++..... +.+.-.+|+|++.+. . -+.+|||++. +++.... ++......
T Consensus 581 ~--------gl~~~~i~-~i~~d~~g~lWi~t~--~-------------Gl~~~~~~~~---~~~~~~~~dGl~~~~f~~ 633 (795)
T 4a2l_A 581 N--------GLPNNVVY-GILEDSFGRLWLSTN--R-------------GISCFNPETE---KFRNFTESDGLQSNQFNT 633 (795)
T ss_dssp G--------TCSCSCEE-EEEECTTSCEEEEET--T-------------EEEEEETTTT---EEEEECGGGTCSCSCEEE
T ss_pred C--------CCchhheE-EEEECCCCCEEEEcC--C-------------ceEEEcCCCC---cEEEcCCcCCCccccCcc
Confidence 1 34444333 233445799988652 1 2468999988 8775432 33223222
Q ss_pred ccceeccCCcEEEecCC
Q 041651 403 SSAILLTDGRVLIGGSN 419 (557)
Q Consensus 403 s~a~llpdG~V~v~GG~ 419 (557)
.+++...||++|++|.+
T Consensus 634 ~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 634 ASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp EEEEECTTSCEEEEETT
T ss_pred CceeECCCCeEEEecCC
Confidence 34566789999997764
No 182
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=88.22 E-value=18 Score=34.34 Aligned_cols=82 Identities=7% Similarity=-0.042 Sum_probs=46.7
Q ss_pred eEEEEECCCCcEEECccC----CCcccccCeecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCceecC-Cccc-cc-ccC
Q 041651 98 HSILYDVATNAYRPLMVQ----TDTWCSSGSVLPN-GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIEL-PQHL-SE-RRW 169 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~-~~~m-~~-~R~ 169 (557)
.+.+||+.+++++.+... ......+.+...+ |++|+.... ..+.+||+. + +.... ...- .. ...
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~-g---~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD-G---TFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT-S---CEEECCSBCTTSCBCBC
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC-C---CEEEEEeccCCCccccC
Confidence 377899988888765431 1112223455578 899987642 368889986 2 23222 1100 11 122
Q ss_pred cceEEEecCCcEEEEcCc
Q 041651 170 YATNQILPDGRIIIIGGR 187 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~ 187 (557)
-.+.+.-++|++|+....
T Consensus 119 ~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp CCEEEECTTSCEEEEECB
T ss_pred CcCEEECCCCCEEEEecC
Confidence 335666678999987643
No 183
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.42 E-value=32 Score=36.35 Aligned_cols=28 Identities=7% Similarity=-0.117 Sum_probs=19.7
Q ss_pred EEEeeCCcEEEEEcC------ceEEEeCCCCeEE
Q 041651 228 VHLLPDGNLFIFANT------RSILFDYKQNKVL 255 (557)
Q Consensus 228 ~~~~~~G~ifv~gg~------~~~~yDp~t~~W~ 255 (557)
....|||+..+++.. ..+++|..++++.
T Consensus 155 ~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 345689998776543 3567888888776
No 184
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.16 E-value=28 Score=35.43 Aligned_cols=91 Identities=7% Similarity=-0.154 Sum_probs=52.1
Q ss_pred eEEEEECCCCcEEEC-ccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc------cc------
Q 041651 98 HSILYDVATNAYRPL-MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ------HL------ 164 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l-~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~------~m------ 164 (557)
.+.+||..+++.... ...+.....+.++. ||+++++|+.+ ..+.+||.. +.+....-. .+
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~ 293 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHL 293 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT---TCCEEEEEECHHHHGGGCCTTSB
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC---CCcEeeeecchhhhhhhhhhccc
Confidence 377888877664332 22233333334455 99999999863 579999987 433211000 00
Q ss_pred -----------ccccCcceEEEecCCcEEEEcCcCCCceeEe
Q 041651 165 -----------SERRWYATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 165 -----------~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
.....-..++..+||+.+++++.....+.+|
T Consensus 294 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 294 APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp C----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred ccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 1112333456677888888887555566666
No 185
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.16 E-value=22 Score=34.28 Aligned_cols=139 Identities=6% Similarity=-0.102 Sum_probs=73.1
Q ss_pred eEEEEECCCCcEEECc-cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc-cCcceEEE
Q 041651 98 HSILYDVATNAYRPLM-VQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER-RWYATNQI 175 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~-~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~-R~y~s~~~ 175 (557)
.+..+|++|++...-- .....|..+.+. .++++|++.-. .+.+.+||+. +.+ .+.. ++.+ --.-+.+
T Consensus 45 ~v~~iD~~tg~v~~~i~l~~~~fgeGi~~-~g~~lyv~t~~---~~~v~viD~~---t~~--v~~~-i~~g~~~g~glt- 113 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHKMDDSYFGEGLTL-LNEKLYQVVWL---KNIGFIYDRR---TLS--NIKN-FTHQMKDGWGLA- 113 (266)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEE-ETTEEEEEETT---CSEEEEEETT---TTE--EEEE-EECCSSSCCEEE-
T ss_pred EEEEEECCCCCEEEEEecCCCcceEEEEE-eCCEEEEEEec---CCEEEEEECC---CCc--EEEE-EECCCCCeEEEE-
Confidence 4889999999976432 223345444333 46788888643 3689999998 432 2221 2222 1111222
Q ss_pred ecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc--CceEEEeCCCC
Q 041651 176 LPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN--TRSILFDYKQN 252 (557)
Q Consensus 176 L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg--~~~~~yDp~t~ 252 (557)
-.++++|+.-|. ..+.++ |.+. ..-...+. ... . ..-.+|......+|+||+.-- +...+.|++++
T Consensus 114 ~Dg~~l~vs~gs--~~l~viD~~t~-----~v~~~I~V--g~~-~-~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 114 TDGKILYGSDGT--SILYEIDPHTF-----KLIKKHNV--KYN-G-HRVIRLNELEYINGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp ECSSSEEEECSS--SEEEEECTTTC-----CEEEEEEC--EET-T-EECCCEEEEEEETTEEEEEETTSSEEEEEETTTC
T ss_pred ECCCEEEEECCC--CeEEEEECCCC-----cEEEEEEE--CCC-C-cccccceeEEEECCEEEEecCCCCeEEEEECCCC
Confidence 224578877653 244445 5521 01111111 000 0 000123333344899997753 56778999999
Q ss_pred eEEEEe
Q 041651 253 KVLKEY 258 (557)
Q Consensus 253 ~W~~~~ 258 (557)
+....+
T Consensus 183 ~V~~~I 188 (266)
T 2iwa_A 183 TLLGWI 188 (266)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 877655
No 186
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.15 E-value=17 Score=35.16 Aligned_cols=138 Identities=7% Similarity=-0.084 Sum_probs=70.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+..+|++|++...-......|..+.+ ..+++||++... .+.+.+||+. +.+-. .. .+.+-..-+.+.- +
T Consensus 77 v~~iD~~Tgkv~~~~l~~~~FgeGit-~~g~~Ly~ltw~---~~~v~V~D~~---Tl~~~--~t-i~~~~eGwGLt~D-g 145 (268)
T 3nok_A 77 LRQLSLESAQPVWMERLGNIFAEGLA-SDGERLYQLTWT---EGLLFTWSGM---PPQRE--RT-TRYSGEGWGLCYW-N 145 (268)
T ss_dssp EEECCSSCSSCSEEEECTTCCEEEEE-ECSSCEEEEESS---SCEEEEEETT---TTEEE--EE-EECSSCCCCEEEE-T
T ss_pred EEEEECCCCcEEeEECCCCcceeEEE-EeCCEEEEEEcc---CCEEEEEECC---cCcEE--EE-EeCCCceeEEecC-C
Confidence 77899999886432222334544444 457899998553 3689999998 43322 11 2222111233322 4
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE--cCceEEEeCCCCeEE
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA--NTRSILFDYKQNKVL 255 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g--g~~~~~yDp~t~~W~ 255 (557)
+++|+.-|. ....++ |.+. ..-...+. .. +..+ -.+.--....+|+||+.- .+...+.||++++..
T Consensus 146 ~~L~vSdGs--~~l~~iDp~T~-----~v~~~I~V--~~-~g~~-v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 146 GKLVRSDGG--TMLTFHEPDGF-----ALVGAVQV--KL-RGQP-VELINELECANGVIYANIWHSSDVLEIDPATGTVV 214 (268)
T ss_dssp TEEEEECSS--SEEEEECTTTC-----CEEEEEEC--EE-TTEE-CCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEE
T ss_pred CEEEEECCC--CEEEEEcCCCC-----eEEEEEEe--CC-CCcc-cccccccEEeCCEEEEEECCCCeEEEEeCCCCcEE
Confidence 556666553 234445 5521 01111111 00 0000 001111223499999754 345678899999877
Q ss_pred EEe
Q 041651 256 KEY 258 (557)
Q Consensus 256 ~~~ 258 (557)
..+
T Consensus 215 ~~I 217 (268)
T 3nok_A 215 GVI 217 (268)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.96 E-value=21 Score=34.33 Aligned_cols=142 Identities=9% Similarity=-0.014 Sum_probs=71.3
Q ss_pred eEEEEECCCCcEEECcc--CCCcccccCeecCCCcEEEEcCCC---CCCCeEEEEcCCCCCCCceecCCcccccccCcce
Q 041651 98 HSILYDVATNAYRPLMV--QTDTWCSSGSVLPNGTLVQSGGYN---DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~i~v~GG~~---~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s 172 (557)
.+.+||+.+++.+.+.. .........++.++|++|+..... +....+.+||+. +.+...+...+ ....+
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~---~~~~~ 186 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD---FRTVTPIIQNI---SVANG 186 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT---SCCEEEEEEEE---SSEEE
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC---CCEEEEeecCC---Ccccc
Confidence 47789998887663321 122233345667899999875421 123468889987 55554332111 12234
Q ss_pred EEEecCCc-EEEEcCcCCCceeEe-cCCCCCCCCCceeeec-ccccccccccCCccceE-EEeeCCcEEEEE--cCceEE
Q 041651 173 NQILPDGR-IIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLH-FLLETRDYAENNLYPFV-HLLPDGNLFIFA--NTRSIL 246 (557)
Q Consensus 173 ~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~-~l~~t~d~~~~~~yp~~-~~~~~G~ifv~g--g~~~~~ 246 (557)
.+.-+||+ +|+.... ...+..| ...+ + ....... ..... ......|.. ..-++|+||+.. +....+
T Consensus 187 i~~~~dg~~l~v~~~~-~~~i~~~d~~~~-g---~~~~~~~~~~~~~---~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT-ANRLHRIALEDD-G---VTIQPFGATIPYY---FTGHEGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp EEECTTSSEEEEEEGG-GTEEEEEEECTT-S---SSEEEEEEEEEEE---CCSSSEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred eEECCCCCEEEEEeCC-CCeEEEEEecCC-C---cCcccccceEEEe---cCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 55567887 6665422 2344555 3211 0 1111100 00000 000113333 344689999876 345788
Q ss_pred EeCCCCe
Q 041651 247 FDYKQNK 253 (557)
Q Consensus 247 yDp~t~~ 253 (557)
||+....
T Consensus 259 ~d~~g~~ 265 (333)
T 2dg1_A 259 FNKRGYP 265 (333)
T ss_dssp ECTTSCE
T ss_pred ECCCCCE
Confidence 9996443
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.45 E-value=22 Score=33.62 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=47.4
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccc--ccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSE--RRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~--~R~y~s~~~L 176 (557)
+..||+.++ .+.+... .....+.++.+||++|+.... ...+.+||+. +.+...+...... ...-..++.-
T Consensus 52 i~~~~~~~~-~~~~~~~-~~~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 52 TWAWSDDGQ-LSPEMHP-SHHQNGHCLNKQGHLIACSHG---LRRLERQREP---GGEWESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp EEEEETTSC-EEEEESS-CSSEEEEEECTTCCEEEEETT---TTEEEEECST---TCCEEEEECEETTEECCCCCCEEEC
T ss_pred EEEEECCCC-eEEEECC-CCCcceeeECCCCcEEEEecC---CCeEEEEcCC---CCcEEEEeeccCCCCCCCCCCEEEC
Confidence 778999887 6555432 222234556679999887532 2579999997 5555543210111 1122346677
Q ss_pred cCCcEEEE
Q 041651 177 PDGRIIII 184 (557)
Q Consensus 177 ~dG~vyvv 184 (557)
++|++|+.
T Consensus 124 ~~G~l~vt 131 (296)
T 3e5z_A 124 PDGSLWFS 131 (296)
T ss_dssp TTSCEEEE
T ss_pred CCCCEEEE
Confidence 89999997
No 189
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.37 E-value=43 Score=37.05 Aligned_cols=136 Identities=12% Similarity=0.043 Sum_probs=75.8
Q ss_pred EEEEECCCCcEEECccCC-----CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc--ccccccCcc
Q 041651 99 SILYDVATNAYRPLMVQT-----DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ--HLSERRWYA 171 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~-----~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~--~m~~~R~y~ 171 (557)
+.+||+.+++|+...... .....+.....+|+|++..-. ..+.+||+. +.++..... .|+... ..
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----~Gl~~~~~~---~~~~~~~~~~~~l~~~~-i~ 542 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----GGVGIYTPD---MQLVRKFNQYEGFCSNT-IN 542 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS----SCEEEECTT---CCEEEEECTTTTCSCSC-EE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC----CCEEEEeCC---CCeEEEccCCCCCCCCe-eE
Confidence 678999998887654321 223333445668898875321 237789998 677765431 132222 23
Q ss_pred eEEEecCCcEEEEcCcCCCce-eEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEeC
Q 041651 172 TNQILPDGRIIIIGGRRQFNY-EFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDY 249 (557)
Q Consensus 172 s~~~L~dG~vyvvGG~~~~~~-E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp 249 (557)
+.+.-.+|+|++... ... ..| |.. .++.... ..+..+.+..-....-.+|+|++.+.+...+|||
T Consensus 543 ~i~~d~~g~lWi~T~---~Glv~~~d~~~------~~~~~~~----~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~ 609 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG---EGLVCFPSARN------FDYQVFQ----RKEGLPNTHIRAISEDKNGNIWASTNTGISCYIT 609 (781)
T ss_dssp EEEECTTSCEEEEET---TEEEEESCTTT------CCCEEEC----GGGTCSCCCCCEEEECSSSCEEEECSSCEEEEET
T ss_pred EEEECCCCCEEEEEC---CCceEEECCCC------CcEEEcc----ccCCCCCceEEEEEECCCCCEEEEcCCceEEEEC
Confidence 344445788887532 122 344 442 1222211 1111222222233344579999988888889999
Q ss_pred CCCeEE
Q 041651 250 KQNKVL 255 (557)
Q Consensus 250 ~t~~W~ 255 (557)
++.++.
T Consensus 610 ~~~~~~ 615 (781)
T 3v9f_A 610 SKKCFY 615 (781)
T ss_dssp TTTEEE
T ss_pred CCCceE
Confidence 999876
No 190
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=85.53 E-value=6.4 Score=39.49 Aligned_cols=94 Identities=11% Similarity=0.126 Sum_probs=52.7
Q ss_pred eEEEEECCCCcEEECc-cCC-CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCce-ecCCcccccccCcceEE
Q 041651 98 HSILYDVATNAYRPLM-VQT-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDW-IELPQHLSERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~-~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W-~~~~~~m~~~R~y~s~~ 174 (557)
.+.+||+.+++-...- ..+ .......+..+||+++++|........+.+||.. +.+- .... .+.....-.+.+
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~---~~~~~~~~~-~~~~~~~v~~~~ 274 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK---HLEEPLSLQ-ELDTSSGVLLPF 274 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT---BCSSCSEEE-ECCCCSSCEEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc---cccCCceEE-eccCCCceeEEE
Confidence 4789999887754332 222 2223345566899999998321123689999987 3221 0010 122333344555
Q ss_pred EecCCcEEEEcCcCCCceeEe
Q 041651 175 ILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~~~E~y 195 (557)
.-+||+.+++.|.....+.+|
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEE
Confidence 667888776555434455666
No 191
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.46 E-value=27 Score=33.65 Aligned_cols=139 Identities=12% Similarity=-0.043 Sum_probs=71.6
Q ss_pred eEEEEECCCCcEEECcc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMV-QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+..+|++|++...-.. ....|..+.+. .+++||++-.. .+.+.+||+. +.+-. .. .+.+--..+.+ -
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~-~g~~ly~ltw~---~~~v~v~D~~---t~~~~--~t-i~~~~eG~glt-~ 134 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISD-WKDKIVGLTWK---NGLGFVWNIR---NLRQV--RS-FNYDGEGWGLT-H 134 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEE-ETTEEEEEESS---SSEEEEEETT---TCCEE--EE-EECSSCCCCEE-E
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEE-eCCEEEEEEee---CCEEEEEECc---cCcEE--EE-EECCCCceEEe-c
Confidence 47899999998754333 33445444444 47799998553 3689999998 43322 11 22222112333 2
Q ss_pred cCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE--cCceEEEeCCCCe
Q 041651 177 PDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA--NTRSILFDYKQNK 253 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g--g~~~~~yDp~t~~ 253 (557)
.++++|+.-|+ ....++ |.+. ..-...+.. .+..+ ..++--....+|+||+.- .+...+.||++++
T Consensus 135 dg~~L~~SdGs--~~i~~iDp~T~-----~v~~~I~V~---~~g~~-~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 135 NDQYLIMSDGT--PVLRFLDPESL-----TPVRTITVT---AHGEE-LPELNELEWVDGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp CSSCEEECCSS--SEEEEECTTTC-----SEEEEEECE---ETTEE-CCCEEEEEEETTEEEEEETTSSEEEEECTTTCB
T ss_pred CCCEEEEECCC--CeEEEEcCCCC-----eEEEEEEec---cCCcc-ccccceeEEECCEEEEEEccCCeEEEEECCCCc
Confidence 23456665553 234455 6521 011111110 00000 001111223499999764 3456789999998
Q ss_pred EEEEe
Q 041651 254 VLKEY 258 (557)
Q Consensus 254 W~~~~ 258 (557)
....+
T Consensus 204 V~~~I 208 (262)
T 3nol_A 204 VTGII 208 (262)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87544
No 192
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.96 E-value=11 Score=36.44 Aligned_cols=82 Identities=11% Similarity=0.102 Sum_probs=50.7
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEec
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILP 177 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~ 177 (557)
.+.+||..+.+....-..+.....+.++.+||+++++||.+ ..+++||.. +.+= +.. +.....-.+++.-+
T Consensus 177 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d---g~i~iwd~~---~~~~--~~~-~~~~~~v~~~~~sp 247 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD---GEIMLWNLA---AKKA--MYT-LSAQDEVFSLAFSP 247 (319)
T ss_dssp CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT---CEEEEEETT---TTEE--EEE-EECCSCEEEEEECS
T ss_pred EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC---CCcE--EEE-ecCCCcEEEEEEcC
Confidence 47789988765443222333333445667899999999873 579999987 3321 111 22222344566778
Q ss_pred CCcEEEEcCcC
Q 041651 178 DGRIIIIGGRR 188 (557)
Q Consensus 178 dG~vyvvGG~~ 188 (557)
||+.++.+..+
T Consensus 248 ~~~~la~~~~~ 258 (319)
T 3frx_A 248 NRYWLAAATAT 258 (319)
T ss_dssp SSSEEEEEETT
T ss_pred CCCEEEEEcCC
Confidence 89888877543
No 193
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.01 E-value=62 Score=35.85 Aligned_cols=137 Identities=9% Similarity=0.036 Sum_probs=73.4
Q ss_pred EEEEECCCCcEEECccC----CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcc-----cccccC
Q 041651 99 SILYDVATNAYRPLMVQ----TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQH-----LSERRW 169 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~-----m~~~R~ 169 (557)
..+||+.+++++.+... ......+.....+|+|++... ..+.+||+. +.+|+..... +.. ..
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-----~Gl~~~~~~---~~~~~~~~~~~~~~~~~~-~~ 499 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-----SALVRFNPE---QRSFTTIEKEKDGTPVVS-KQ 499 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-----SCEEEEETT---TTEEEECCBCTTCCBCCC-CC
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-----CceeEEeCC---CCeEEEccccccccccCC-ce
Confidence 67899999988876531 111222233445788887543 247889998 7788765421 111 22
Q ss_pred cceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcCceEEEe
Q 041651 170 YATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFD 248 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yD 248 (557)
-.+...-.+|++++... . ..-.| +.. ..+ ..... ......+.+..-....-.+|+|++.......+||
T Consensus 500 i~~i~~d~~g~lWigt~-~--Gl~~~~~~~------~~~-~~~~~-~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d 568 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE-E--GLSVFKQEG------LDI-QKASI-LPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFN 568 (795)
T ss_dssp EEEEEECTTCCEEEEES-S--CEEEEEEET------TEE-EECCC-SCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEE
T ss_pred EEEEEECCCCCEEEEeC-C--ceEEEeCCC------CeE-EEecC-CCCCCCCCCeeEEEEECCCCCEEEEeCCCceeEC
Confidence 23444556789988543 2 23334 431 122 11000 0000011111111222357999987766778999
Q ss_pred CCCCeEE
Q 041651 249 YKQNKVL 255 (557)
Q Consensus 249 p~t~~W~ 255 (557)
++++++.
T Consensus 569 ~~~~~~~ 575 (795)
T 4a2l_A 569 EKDKQIK 575 (795)
T ss_dssp TTTTEEE
T ss_pred CCCCcEE
Confidence 9999876
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=82.75 E-value=45 Score=34.02 Aligned_cols=53 Identities=13% Similarity=0.061 Sum_probs=32.4
Q ss_pred ceEEEEECCCCcEEE-CccCC------CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 97 AHSILYDVATNAYRP-LMVQT------DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 97 ~~~~~yDp~t~~w~~-l~~~~------~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
..+.+||+.|++-.. +.... .....+.++.+||+.+.+... ...+++.+.|..
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~~VsVID~~ 168 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAPAVGVVDLE 168 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSCEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCCeEEEEECC
Confidence 358899999988643 33221 123445667789875444322 113678899987
No 195
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=82.51 E-value=8.4 Score=36.50 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=62.7
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc---cCcceEEEecCCcEEEEcCcCCCceeEe-cC
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER---RWYATNQILPDGRIIIIGGRRQFNYEFY-PK 197 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~---R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~ 197 (557)
+..+.++|.+|++ . + -.+.+.+|-+++...|...+. .-.. +-++.+..-++|.||++.+ +.-+... |.
T Consensus 92 a~~fD~~G~LYav-~--d--G~iyr~~pP~~~~~~Wl~~a~-~vg~~gw~~~~~lff~p~G~Lyav~d--g~lyr~~~P~ 163 (236)
T 1tl2_A 92 FLFFDPNGYLYAV-S--K--DKLYKASPPQSDTDNWIARAT-EVGSGGWSGFKFLFFHPNGYLYAVHG--QQFYKALPPV 163 (236)
T ss_dssp EEEECTTSCEEEE-E--T--TEEEEESCCCSTTCCHHHHSE-EEECSSGGGEEEEEECTTSCEEEEET--TEEEEECCCS
T ss_pred EEEECCCCCEEEe-C--C--CEEEEeCCCcCCCCceecccc-EeccCCCCceEEEEECCCceEEEEeC--CcEEecCCCC
Confidence 4556789999999 2 3 367777875444678976543 3211 2357778888999999983 2222223 43
Q ss_pred CCCCCCCCceeee-cccccccccccCCccceEEEeeCCcEEEEE
Q 041651 198 SDEDLSFPQTFML-HFLLETRDYAENNLYPFVHLLPDGNLFIFA 240 (557)
Q Consensus 198 ~~~~~~~~~w~~~-~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g 240 (557)
.. ...|... ..+ .. ...+.|++++..++|.||.+-
T Consensus 164 ~~----~~~wl~~~~~~-g~---~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 164 SN----QDNWLARATKI-GQ---GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp ST----TCCHHHHCEEE-ES---SSGGGEEEEEECTTSCEEEEE
T ss_pred CC----Cccccccccee-cc---CCcceEEEEEECCCCcEEEEe
Confidence 21 2355321 111 11 235678888888899999775
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=82.38 E-value=19 Score=34.46 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=21.5
Q ss_pred EEeeCCcEEEEEcCceEEEeCCCCeEEE
Q 041651 229 HLLPDGNLFIFANTRSILFDYKQNKVLK 256 (557)
Q Consensus 229 ~~~~~G~ifv~gg~~~~~yDp~t~~W~~ 256 (557)
...++|++++..+....+||++++++..
T Consensus 60 ~~~~dG~l~v~~~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 60 ALRQSGGYVATIGTKFCALNWKEQSAVV 87 (297)
T ss_dssp EEBTTSSEEEEETTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEECCeEEEEECCCCcEEE
Confidence 3456899887776777899999988763
No 197
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=81.61 E-value=10 Score=37.57 Aligned_cols=49 Identities=4% Similarity=-0.040 Sum_probs=33.5
Q ss_pred EEEEECCCCcEEE-CccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 99 SILYDVATNAYRP-LMVQ-TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 99 ~~~yDp~t~~w~~-l~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
+.+||..+++-.. +... +.....+.++-+||+.+++|+.+ ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 7799998776432 2211 33334445667899999999863 578999976
No 198
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.29 E-value=34 Score=34.25 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=51.8
Q ss_pred CCceEEEEec---CCCCcceee-c-CCC--------C-ceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcC
Q 041651 316 ISTCGRLVVS---HANPSWVME-E-MPL--------P-RVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRP 381 (557)
Q Consensus 316 ~~s~~~~d~~---~~~~~W~~~-~-M~~--------~-R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP 381 (557)
.+.+.+||+. .....|... + ... . ...-++++=++|.+||++-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 3557788887 434566553 2 111 1 2244667778999999864320 14778888
Q ss_pred CCCCCCceEecCCCCCcccccccceeccCCcEEEecCC
Q 041651 382 SEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 382 ~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~ 419 (557)
....-..|-.-.+-...|..-...+..|||+.+++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 75422236433322333444444566789976666544
No 199
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=80.95 E-value=24 Score=32.52 Aligned_cols=82 Identities=11% Similarity=0.017 Sum_probs=49.2
Q ss_pred eEEEEECCC-CcEEECccCCC-cccccCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCceecCCcccccccCcceEE
Q 041651 98 HSILYDVAT-NAYRPLMVQTD-TWCSSGSVLPNGTLVQSGGYN-DGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t-~~w~~l~~~~~-~~c~~~~~l~dG~i~v~GG~~-~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
.+.+||..+ ++...+..... .........+||+.+++++.. ++...++.+|.. +.+...+.. .. . ....+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~---~~~~~~~~~-~~--~-~~~~~ 135 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST---GGTPRLMTK-NL--P-SYWHG 135 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT---CCCCEECCS-SS--S-EEEEE
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC---CCceEEeec-CC--C-ccceE
Confidence 378999998 88776654332 233445677899988888743 234678888876 444333322 11 1 23345
Q ss_pred EecCCcEEEEcC
Q 041651 175 ILPDGRIIIIGG 186 (557)
Q Consensus 175 ~L~dG~vyvvGG 186 (557)
.-+||+.+++.+
T Consensus 136 ~spdg~~l~~~~ 147 (297)
T 2ojh_A 136 WSPDGKSFTYCG 147 (297)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 566888666433
No 200
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=80.71 E-value=38 Score=31.79 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=47.4
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L 176 (557)
.+.+||.++++-......+...+. ....++.+++.|+.. ..+..++.. ..... ... +. ...........
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~---~~~~~-~~~-~~~~~~~~~~~~~~ 159 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR---VAEHH-VAT-LSGHSQEVCGLRWA 159 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT---SSSCE-EEE-EECCSSCEEEEEEC
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC---CCcee-EEE-EcCccCceEEEEEc
Confidence 478899988875443333332222 233467888888763 356666655 22211 111 11 22333444556
Q ss_pred cCCcEEEEcCcCCCceeEe
Q 041651 177 PDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 177 ~dG~vyvvGG~~~~~~E~y 195 (557)
.+|+.++.|+.++ .+.+|
T Consensus 160 ~~~~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 160 PDGRHLASGGNDN-LVNVW 177 (318)
T ss_dssp TTSSEEEEEETTS-CEEEE
T ss_pred CCCCEEEEEecCc-ceeEE
Confidence 6888888887654 34555
No 201
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.52 E-value=43 Score=32.30 Aligned_cols=68 Identities=16% Similarity=0.122 Sum_probs=33.3
Q ss_pred EEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcc-cccccceeccCCcEEEecCC
Q 041651 345 MILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPR-MYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 345 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R-~yhs~a~llpdG~V~v~GG~ 419 (557)
.++-++|+|||........ . ........+.+|||... ....+.. +... ..+.+.+...+|++|++...
T Consensus 234 i~~d~~G~l~va~~~~~~~--~-~~~~~~~~v~~~d~~G~---~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~ 302 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDG--N-MHGRVDPKGIKFDEFGN---ILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLF 302 (322)
T ss_dssp EEECTTSCEEEEEEEETTS--S-TTSCEEEEEEEECTTSC---EEEEEEC-CTTTTTSCCCEEEEETTEEEEECSS
T ss_pred eEECCCCCEEEEecCcccc--c-ccCCCccEEEEECCCCC---EEEEEEC-CCCCccccceEEEEeCCEEEEeecC
Confidence 4556789999986431000 0 00000125789999644 4433321 1110 11223334478999998643
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=77.52 E-value=51 Score=31.45 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=72.4
Q ss_pred eEEEEECCCCcEEECccCC----CcccccCeecCCCcEEEE----cCCC----------CCCCeEEEEcCCCCCCCceec
Q 041651 98 HSILYDVATNAYRPLMVQT----DTWCSSGSVLPNGTLVQS----GGYN----------DGDHVVRTFTPCDDDQCDWIE 159 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~i~v~----GG~~----------~g~~~v~~ydp~~~~t~~W~~ 159 (557)
.+..||+. ++.+.+.... .......++.++|++|++ |-.. .+...+.+||+. +.+++.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQR 183 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEE
Confidence 46778876 6666554211 112334567789999996 4321 012468899997 566554
Q ss_pred CCcccccccCcceEEEecCCc-EEEEcCcC----CCceeEecCCCCCCCCCceeeecccccccccccCCccce-EEEeeC
Q 041651 160 LPQHLSERRWYATNQILPDGR-IIIIGGRR----QFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPF-VHLLPD 233 (557)
Q Consensus 160 ~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~----~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~-~~~~~~ 233 (557)
+. .+..+ .+.+.-+||+ +|+..-.. ...+..|... . ............ ...+|. ..+-++
T Consensus 184 ~~-~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-~----~~l~~~~~~~~~-----~~~~pdgi~~d~~ 249 (305)
T 3dr2_A 184 MA-DLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR-D----GALHDRRHFASV-----PDGLPDGFCVDRG 249 (305)
T ss_dssp EE-EESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEE-T----TEEEEEEEEECC-----SSSCCCSEEECTT
T ss_pred Ee-cCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEec-C----CCccCCeEEEEC-----CCCCCCeEEECCC
Confidence 42 23222 3456667887 66654321 1234445211 0 011000000000 011222 345568
Q ss_pred CcEEEEEcCceEEEeCCCCeE
Q 041651 234 GNLFIFANTRSILFDYKQNKV 254 (557)
Q Consensus 234 G~ifv~gg~~~~~yDp~t~~W 254 (557)
|+||+..+....+||+.....
T Consensus 250 G~lwv~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 250 GWLWSSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp SCEEECCSSEEEEECTTSCEE
T ss_pred CCEEEecCCcEEEECCCCCEE
Confidence 999988766788999965543
No 203
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=77.12 E-value=53 Score=33.31 Aligned_cols=73 Identities=15% Similarity=0.078 Sum_probs=37.1
Q ss_pred eeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCC
Q 041651 342 MGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 342 ~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
.|.+++.-+|+||..|-...|.-|.... .....+..-+...+ .....++ .-.+|+ ++|..||+||.-|.+..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~~--~~v~~i~----~G~~hs-~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALSN--SFISQIS----GGWRHT-MALTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGTT--SCEEEEE----ECSSEE-EEEETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccCC--CCEEEEE----ecCCEE-EEEcCCCeEEEeeCCCC
Confidence 4555667799999999544333221110 11111111111011 1233221 234574 55678999999998765
Q ss_pred c
Q 041651 422 I 422 (557)
Q Consensus 422 ~ 422 (557)
+
T Consensus 307 G 307 (406)
T 4d9s_A 307 G 307 (406)
T ss_dssp S
T ss_pred C
Confidence 4
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=75.39 E-value=91 Score=33.34 Aligned_cols=110 Identities=8% Similarity=-0.056 Sum_probs=59.3
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEe-cCCCCCCCCC
Q 041651 127 PNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFP 205 (557)
Q Consensus 127 ~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~ 205 (557)
+++.+||+... ..++.++|+. +.+-.. . +..+..-+.++.-+||+.+.+++.+ ..+..| ....+ .
T Consensus 165 ~~~~~~V~~~~---~~~V~viD~~---t~~v~~--~-i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t---~- 230 (567)
T 1qks_A 165 LENLFSVTLRD---AGQIALIDGS---TYEIKT--V-LDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKE---P- 230 (567)
T ss_dssp GGGEEEEEETT---TTEEEEEETT---TCCEEE--E-EECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSS---C-
T ss_pred CCceEEEEeCC---CCeEEEEECC---CCeEEE--E-EeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCC---C-
Confidence 34677777643 3689999998 544321 1 3344334567777888765555543 245555 32000 0
Q ss_pred ceeeecccccccccccCCccceEEE-e----eCCcEEEEEc---CceEEEeCCCCeEEEEec
Q 041651 206 QTFMLHFLLETRDYAENNLYPFVHL-L----PDGNLFIFAN---TRSILFDYKQNKVLKEYP 259 (557)
Q Consensus 206 ~w~~~~~l~~t~d~~~~~~yp~~~~-~----~~G~ifv~gg---~~~~~yDp~t~~W~~~~p 259 (557)
+ ....+ +....|+... . +||+..++++ +...++|..+.+-.+.++
T Consensus 231 ~--~v~~i-------~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 231 T--TVAEI-------KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp C--EEEEE-------ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred c--EeEEE-------ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 1 11001 1122355443 4 4898555544 456789999988765554
No 205
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=75.02 E-value=48 Score=33.42 Aligned_cols=211 Identities=10% Similarity=0.070 Sum_probs=0.0
Q ss_pred CcceEEEecCCcEEEEc-------CcCCCceeEecCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc
Q 041651 169 WYATNQILPDGRIIIIG-------GRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN 241 (557)
Q Consensus 169 ~y~s~~~L~dG~vyvvG-------G~~~~~~E~yP~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg 241 (557)
.+|+++...||+||+.| |.........|. .-..+.......-......+..+++..+|+||.+|.
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~--------~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPT--------LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEE--------ECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCE--------EcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Q ss_pred Cc---------------eEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccc
Q 041651 242 TR---------------SILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFAL 306 (557)
Q Consensus 242 ~~---------------~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~ 306 (557)
+. ..+-.....++. .+. .-.+| +.++.. +|+||..|-...+....
T Consensus 134 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~-~va------~G~~h---s~alt~----------~G~v~~wG~n~~GqLG~ 193 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVIESLRGIEVV-DVA------AGGAH---SACVTA----------AGDLYTWGKGRYGRLGH 193 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEE-EEE------ECSSE---EEEEET----------TSCEEEEECCGGGTTCS
T ss_pred CCCCcCCCCCCccCcCCeEecccCCCeEE-EEE------eCcCe---EEEEeC----------CCeEEEeCCCCCCCcCC
Q ss_pred cccccccccCCceEEEEecCCCCcceeecCCCCc-eeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCC
Q 041651 307 ATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPR-VMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQT 385 (557)
Q Consensus 307 ~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R-~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~ 385 (557)
. .......-.....-.......+.... ..|.+++.-||+||..|-...|.-|.........-..+-.....
T Consensus 194 ~-------~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~- 265 (389)
T 3kci_A 194 S-------DSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL- 265 (389)
T ss_dssp S-------SCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTS-
T ss_pred C-------CCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCC-
Q ss_pred CCceEecCCCCCcccccccceeccCCcEEEecCCCCc
Q 041651 386 SRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHI 422 (557)
Q Consensus 386 g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~ 422 (557)
+...+ .+-.+| +++|..||+||.-|.+..+
T Consensus 266 --~v~~v----~~G~~h-s~alt~~G~v~~wG~n~~G 295 (389)
T 3kci_A 266 --GVVKV----ECGSQF-SVALTKSGAVYTWGKGDYH 295 (389)
T ss_dssp --CEEEE----EEETTE-EEEEETTSCEEEEECCGGG
T ss_pred --cEEEE----eCCCCE-EEEEeCCCeEEEEeCCCCC
No 206
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=71.59 E-value=5.4 Score=42.53 Aligned_cols=89 Identities=16% Similarity=0.220 Sum_probs=54.1
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEE---
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQ--- 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~--- 174 (557)
.+.++|+.+++++.+... .......+..+||+.++.+.. ++...+.++|.. +.+...+.. . .......+
T Consensus 176 ~i~~~d~~~g~~~~l~~~-~~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~---~~~~~~~~~-~--~~~~~~~~~~~ 247 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSG-EGSFSSASISPGMKVTAGLET-AREARLVTVDPR---DGSVEDLEL-P--SKDFSSYRPTA 247 (582)
T ss_dssp EEEEEETTTCCCEEECCS-SCEEEEEEECTTSCEEEEEEC-SSCEEEEEECTT---TCCEEECCC-S--CSHHHHHCCSE
T ss_pred EEEEEcCCCCCceEeecC-CCccccceECCCCCEEEEccC-CCeeEEEEEcCC---CCcEEEccC-C--CcChhhhhhcc
Confidence 478899999999877433 223345567789998885433 344589999998 555542221 1 11111122
Q ss_pred -----EecCCcEEEEcCcCCCceeEe
Q 041651 175 -----ILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 175 -----~L~dG~vyvvGG~~~~~~E~y 195 (557)
.-+||++++.+..++ ...+|
T Consensus 248 ~~~~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEEEEECTTSCEEEEEEETT-EEEEE
T ss_pred ccceeEcCCCcEEEEEEcCC-cEEEE
Confidence 457998888776543 34444
No 207
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=70.91 E-value=1.4e+02 Score=33.66 Aligned_cols=64 Identities=6% Similarity=0.040 Sum_probs=38.1
Q ss_pred EEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEE
Q 041651 55 QLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQS 134 (557)
Q Consensus 55 ~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~ 134 (557)
+.-++|++++.|+.+ | .+.+||..+.+..... .+.......++.+ |+.+++
T Consensus 24 afspdg~~lAsgs~D----------g-----------------~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S 74 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT----------G-----------------EVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVV 74 (902)
T ss_dssp EEETTTTEEEEEETT----------S-----------------EEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEE
T ss_pred EECCCCCEEEEEeCC----------C-----------------EEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEE
Confidence 344688888887642 3 3677887665543221 1111122334445 777777
Q ss_pred cCCCCCCCeEEEEcCC
Q 041651 135 GGYNDGDHVVRTFTPC 150 (557)
Q Consensus 135 GG~~~g~~~v~~ydp~ 150 (557)
|+.+ ..+++||..
T Consensus 75 ~s~D---~~v~lWd~~ 87 (902)
T 2oaj_A 75 INAK---DTVYVLSLY 87 (902)
T ss_dssp EETT---CEEEEEETT
T ss_pred EECc---CeEEEEECC
Confidence 7753 689999987
No 208
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=69.11 E-value=33 Score=33.52 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=32.9
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCC-------------CCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYN-------------DGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~-------------~g~~~v~~ydp~ 150 (557)
.+.+||+.+++.+.+..... +. ....+ ||+++++.+.. .+...+.++|+.
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred eEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 37889999888776653322 22 45557 99988875421 133678899987
No 209
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=68.24 E-value=36 Score=36.46 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred eEEEEECCCCcEEECccCCCc-----cc---ccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccC
Q 041651 98 HSILYDVATNAYRPLMVQTDT-----WC---SSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRW 169 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~-----~c---~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~ 169 (557)
.+..+|+.+++++.+...... |. ...++.++|++++.+.. +...++.+|.. +.+...+.. . ...
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~---~~~~~~l~~--~-~~~ 337 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE---SGELVDAAG--P-WTE 337 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT---TTEEEECCS--S-CCE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC---CCcEEEecC--C-CCe
Confidence 578889989999887653221 11 12334468999888765 55677777887 555555532 1 111
Q ss_pred cceEEEecCCcEEEEcCcCCCceeEe
Q 041651 170 YATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 170 y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
..+.....+++++++.+......++|
T Consensus 338 ~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 338 WAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 22221232445555555443333444
No 210
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=67.20 E-value=27 Score=35.22 Aligned_cols=171 Identities=13% Similarity=0.156 Sum_probs=79.2
Q ss_pred CCccceEEEeeCCcEEEEEc--------CceEEEe--CCCCeEEEEecCCCCCCCCccCC--CCceEeecCcCCCCCccc
Q 041651 222 NNLYPFVHLLPDGNLFIFAN--------TRSILFD--YKQNKVLKEYPEIPGADPRNYPS--TGSSVLLPLDERNGSTSV 289 (557)
Q Consensus 222 ~~~yp~~~~~~~G~ifv~gg--------~~~~~yD--p~t~~W~~~~p~lp~~~~r~~~~--~g~~vllp~~~~~~~~~~ 289 (557)
...||..+.++||.|++..- ....+|- -...+|.+ +..+... ...+.. ......+|..-..+ .
T Consensus 22 ~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~-~~~v~~~-~~g~~~~~~P~l~~lp~~v~~~---~ 96 (355)
T 3a72_A 22 RTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNE-ISRVHDT-VNGYGLRYQPFLYSLPERVGSF---K 96 (355)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEE-EEEECCT-TTSSCEEEEEEEEECSSCBTTB---C
T ss_pred CCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCC-CcccCCC-cCCcccccCCcEEecCcccccC---C
Confidence 45689999999999998642 1223442 23457874 3222211 000000 01112223100001 1
Q ss_pred ccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-c-----CCCC-----ce-eeeEEEcCCCeEEEEc
Q 041651 290 QAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-E-----MPLP-----RV-MGDMILLPNGDVIIIN 357 (557)
Q Consensus 290 ~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~-----M~~~-----R~-~~~~v~lpdG~I~vvG 357 (557)
+|+|+++|-..... .....+..+--++.+.+|+.. . .+.+ .. +. .+.+.+|+|++.-
T Consensus 97 ~G~ll~~~~~~~~d----------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~ 165 (355)
T 3a72_A 97 KGTLLLAGSSIPTD----------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYY 165 (355)
T ss_dssp TTCEEEEEEECCTT----------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEE
T ss_pred CCcEEEEEeeecCC----------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEE
Confidence 67888774211000 001123344445556889874 3 2221 12 22 3466799998875
Q ss_pred CcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCC-----CCcccccccceeccCCcEEEe
Q 041651 358 GAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPS-----TRPRMYHSSAILLTDGRVLIG 416 (557)
Q Consensus 358 G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~-----~~~R~yhs~a~llpdG~V~v~ 416 (557)
....+... ..+....--.+| |++|+..... ...|.....++-|+||+++++
T Consensus 166 ~~~~~~~~-------~~~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 166 SDQRDNAT-------YGQTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp EECCCTTT-------CSCEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCC-------CCcEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 32211000 011122223345 7799754322 122333445677899998776
No 211
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=67.05 E-value=84 Score=29.47 Aligned_cols=58 Identities=5% Similarity=-0.028 Sum_probs=30.6
Q ss_pred cEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccccc-CcceEEEecCCc-EEEEcCcCCCceeEe
Q 041651 130 TLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERR-WYATNQILPDGR-IIIIGGRRQFNYEFY 195 (557)
Q Consensus 130 ~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~-vyvvGG~~~~~~E~y 195 (557)
.++++++.. ..+.+||+. +.+-...-. +.... .-..++.-+||+ +|+.+. ....+.+|
T Consensus 2 ~~~v~~~~~---~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~ 61 (337)
T 1pby_B 2 DYILAPARP---DKLVVIDTE---KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVN-KSESLVKI 61 (337)
T ss_dssp EEEEEEETT---TEEEEEETT---TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEET-TTTEEEEE
T ss_pred cEEEEcCCC---CeEEEEECC---CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeC-CCCeEEEE
Confidence 456666542 579999987 444322111 22211 134566677885 555554 33445566
No 212
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=66.57 E-value=1.1e+02 Score=30.61 Aligned_cols=131 Identities=15% Similarity=0.278 Sum_probs=65.6
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCC-C--CCCCeEEEEcCCCCCCCceecCCcccccc------c
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGY-N--DGDHVVRTFTPCDDDQCDWIELPQHLSER------R 168 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~-~--~g~~~v~~ydp~~~~t~~W~~~~~~m~~~------R 168 (557)
...+|.+..+ + ......+...+.|.||+||+.-=. . .+.....+|-..++ ..+|.++.. +... +
T Consensus 8 ~~~if~~~~~-~----~~~~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~Dg-G~TW~~~~~-v~~~~~g~~~~ 80 (355)
T 3a72_A 8 NVTIFSPPSD-Y----IVPRTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDH-GKTWNEISR-VHDTVNGYGLR 80 (355)
T ss_dssp EEEEECCCTT-S----CTTSEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESST-TSCCEEEEE-ECCTTTSSCEE
T ss_pred eeeEecCCcc-c----CCCCCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCC-CcCcCCCcc-cCCCcCCcccc
Confidence 4557776443 1 112233455677889999986311 0 12234455654433 678998643 3211 2
Q ss_pred CcceEEEec-------CCcEEEEcCcC-----CCceeEe-cCCCCCCCCCceeeecccccccccc-----cCCccceEEE
Q 041651 169 WYATNQILP-------DGRIIIIGGRR-----QFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYA-----ENNLYPFVHL 230 (557)
Q Consensus 169 ~y~s~~~L~-------dG~vyvvGG~~-----~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~-----~~~~yp~~~~ 230 (557)
..+++..++ +|+|++.|-.. .....+| ... . ..+|..+..+....... ...+.| ..+
T Consensus 81 ~~P~l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D-~---G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~ 155 (355)
T 3a72_A 81 YQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQD-D---GMTWDFVSHIAAGGEARPNNGLTPVWEP-FLL 155 (355)
T ss_dssp EEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESS-T---TSCCEEEEEEEEESCSSCCTTCCCEEEE-EEE
T ss_pred cCCcEEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECC-C---CccCccCccccccCccccccCCCccccc-eEE
Confidence 234455555 89999885321 1123455 442 2 46787543221110000 011245 355
Q ss_pred eeCCcEEEEE
Q 041651 231 LPDGNLFIFA 240 (557)
Q Consensus 231 ~~~G~ifv~g 240 (557)
+.+|+|.+.-
T Consensus 156 ~~~G~l~~~~ 165 (355)
T 3a72_A 156 ANKGKLICYY 165 (355)
T ss_dssp EETTEEEEEE
T ss_pred ccCCeEEEEE
Confidence 6799988764
No 213
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=66.50 E-value=1.8e+02 Score=32.95 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=20.7
Q ss_pred eCCcEEEEEcCceEEEeCCCCeEEE
Q 041651 232 PDGNLFIFANTRSILFDYKQNKVLK 256 (557)
Q Consensus 232 ~~G~ifv~gg~~~~~yDp~t~~W~~ 256 (557)
++|.+.+.+.....+|++.+++..+
T Consensus 713 ~~~~~l~~~~~~ir~~~~~~~k~~~ 737 (902)
T 2oaj_A 713 IPGIVLITGFDDIRLITLGKSKSTH 737 (902)
T ss_dssp CCEEEEEECSSEEEEECTTCCCEEE
T ss_pred CCeEEEEEeccceEEEeCcccccee
Confidence 5788888888888999999887664
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=66.32 E-value=1.1e+02 Score=30.75 Aligned_cols=31 Identities=16% Similarity=0.243 Sum_probs=22.3
Q ss_pred ceEE-EeeCCcEEEEEc--CceEEEeCCCCeEEE
Q 041651 226 PFVH-LLPDGNLFIFAN--TRSILFDYKQNKVLK 256 (557)
Q Consensus 226 p~~~-~~~~G~ifv~gg--~~~~~yDp~t~~W~~ 256 (557)
|+.. +-++|+||+... ....+||+++++...
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~ 166 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT 166 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE
Confidence 4443 347899999865 457889999887653
No 215
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=65.00 E-value=48 Score=35.50 Aligned_cols=93 Identities=15% Similarity=0.168 Sum_probs=55.5
Q ss_pred ceEEEEECC-CC---cEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc---ccccccC
Q 041651 97 AHSILYDVA-TN---AYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ---HLSERRW 169 (557)
Q Consensus 97 ~~~~~yDp~-t~---~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~---~m~~~R~ 169 (557)
..+.++|.. ++ +.+.+...+.......+..+||++|+++.. ++...++.+|+. +.++..+.. ....+.|
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA---TGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT---TCCEEESSCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC---CCceeecccccccccCccc
Confidence 357889998 56 455444322222333455689998877654 344578999987 667766543 1122344
Q ss_pred cc---eEEEecCCcEEEEcCcCCCceeEe
Q 041651 170 YA---TNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 170 y~---s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
.+ +.+..+||++++.+.. ....+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred cccCceEeEeCCCEEEEEEEc--CccEEE
Confidence 32 3455568999888765 344455
No 216
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=64.71 E-value=15 Score=36.98 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=33.8
Q ss_pred eEEEEECCCCcEEECccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQ--TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.+||..+.+-...-.. +.....+.++.++|+.+++|+.+ ..+++||..
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~ 244 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR 244 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC
Confidence 378999988765332221 22333345566799999999873 579999987
No 217
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=64.38 E-value=37 Score=39.15 Aligned_cols=84 Identities=7% Similarity=-0.025 Sum_probs=51.8
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCC-------CCCeEEEEcCCCCCCCceecCCcccccccCc
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYND-------GDHVVRTFTPCDDDQCDWIELPQHLSERRWY 170 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~-------g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y 170 (557)
.+.+||+.+++...+...+.......+.-+||+.+++++... ....+.+||.. +.+...+.. .....
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~---~g~~~~l~~---~~~~~ 474 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME---GRKIFAATT---ENSHD 474 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT---TTEEEECSC---SSSBE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC---CCcEEEeeC---CCccc
Confidence 477999999988776543333334456678999888776421 23578999988 555444332 11112
Q ss_pred ceEEEecCCcEEEEcCc
Q 041651 171 ATNQILPDGRIIIIGGR 187 (557)
Q Consensus 171 ~s~~~L~dG~vyvvGG~ 187 (557)
.+.+..+||+.++++..
T Consensus 475 ~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEECTTSCEEEEEES
T ss_pred CCceEcCCCCEEEEEec
Confidence 33455678986666543
No 218
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=64.13 E-value=66 Score=32.94 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=68.8
Q ss_pred CCcEEEEEc-CceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecCcCCCCCccccc-EEEEEcCCCCccccccccc
Q 041651 233 DGNLFIFAN-TRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQA-EIMICGGAQNASFALATQG 310 (557)
Q Consensus 233 ~G~ifv~gg-~~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~~~~~~~~~~~g-~I~v~GG~~~~~~~~~~~~ 310 (557)
+|+||+.-. ....++|+++++.....+ .. ..|. +.+ +-+ ++ .||++.......
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~----~~P~-~ia-~d~----------~G~~lyvad~~~~~~------- 203 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYS--GL----SKVR-TIC-WTH----------EADSMIITNDQNNND------- 203 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEEC--CC----SCEE-EEE-ECT----------TSSEEEEEECCSCTT-------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEec--CC----CCcc-eEE-EeC----------CCCEEEEEeCCCCcc-------
Confidence 478888754 456789999988764332 11 1120 222 111 44 488886432100
Q ss_pred cccccCCceEEEEecCCCCcce---ee-cCCCCceeeeEEEcC-CCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCC
Q 041651 311 VFIRAISTCGRLVVSHANPSWV---ME-EMPLPRVMGDMILLP-NGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQT 385 (557)
Q Consensus 311 ~~~pa~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~ 385 (557)
...+..++.. ..|. .. .+..+ ++.++-| +|.||+.--.. ..+.+||+.+.
T Consensus 204 -----~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~- 258 (430)
T 3tc9_A 204 -----RPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA-------------GQVFRYDFTTQ- 258 (430)
T ss_dssp -----SEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------TEEEEEETTTT-
T ss_pred -----cceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------CEEEEEECCCC-
Confidence 1122233332 2333 12 33333 3445667 89999975211 26899999876
Q ss_pred CCceEec---CCCCCcccccccceeccCCc-EEEecCC
Q 041651 386 SRRFSVM---EPSTRPRMYHSSAILLTDGR-VLIGGSN 419 (557)
Q Consensus 386 g~~W~~~---~~~~~~R~yhs~a~llpdG~-V~v~GG~ 419 (557)
..+.+ .....|+ ..++.|||+ +|++-..
T Consensus 259 --~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 259 --ETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp --EEEEEEECSSSSCCE----EEEECTTSSEEEEEETT
T ss_pred --cEEEEEEcCCCCcce----eEEEcCCCCEEEEEECC
Confidence 44222 2222233 245678998 8988443
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=60.36 E-value=1.9e+02 Score=31.37 Aligned_cols=56 Identities=13% Similarity=0.104 Sum_probs=31.8
Q ss_pred EEEEECCCCc--EEECccCC-----Ccccc---cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceec
Q 041651 99 SILYDVATNA--YRPLMVQT-----DTWCS---SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIE 159 (557)
Q Consensus 99 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~ 159 (557)
+..+|.+|++ |+.-.... ..+|. .+..+.+++||+.... ..+..+|..++ ...|+.
T Consensus 89 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~tG-~~~W~~ 154 (677)
T 1kb0_A 89 VHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAATG-KEVWHQ 154 (677)
T ss_dssp EEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETTTC-CEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECCCC-CEEeee
Confidence 6778888776 65432211 11221 2233457777776432 46888999854 456865
No 220
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.69 E-value=2e+02 Score=31.32 Aligned_cols=107 Identities=13% Similarity=0.030 Sum_probs=57.4
Q ss_pred EEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEE
Q 041651 55 QLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQS 134 (557)
Q Consensus 55 ~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~ 134 (557)
...|||+.+++..... |. -...+.++|..+++..+.... .....+.+..+| +-+++
T Consensus 169 ~~SPDG~~la~~~~~~---------G~-------------e~~~i~v~dl~tg~~~~~~~~-~~~~~~~~wspD-~~l~~ 224 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDG---------GS-------------DWRTVKFVGVADGKPLADELK-WVKFSGLAWLGN-DALLY 224 (741)
T ss_dssp EECTTSSEEEEEEEET---------TC-------------SEEEEEEEETTTCCEEEEEEE-EEESCCCEESTT-SEEEE
T ss_pred EECCCCCEEEEEEcCC---------CC-------------ceEEEEEEECCCCCCCCccCC-CceeccEEEECC-CEEEE
Confidence 3447888888776432 21 013588999999998764221 111234556678 66655
Q ss_pred cCCCCC-----------CCeEEEEcCCCCCCCcee--cCCcccccccCcceEEEecCCcEEEEcCcC
Q 041651 135 GGYNDG-----------DHVVRTFTPCDDDQCDWI--ELPQHLSERRWYATNQILPDGRIIIIGGRR 188 (557)
Q Consensus 135 GG~~~g-----------~~~v~~ydp~~~~t~~W~--~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~ 188 (557)
+..... ...+++++.. +..-. .+-..-..+++..+...-+||+.+++...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~v~~~~lg---t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 225 SRFAEPKEGQAFQALNYNQTVWLHRLG---TPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp EECCCC--------CCCCCEEEEEETT---SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred EEecCcccccccccCCCCCEEEEEECC---CCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 544322 2357777765 32210 110001123455566677899866665543
No 221
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=58.72 E-value=2e+02 Score=31.04 Aligned_cols=61 Identities=11% Similarity=0.055 Sum_probs=37.3
Q ss_pred EEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEE
Q 041651 54 MQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQ 133 (557)
Q Consensus 54 ~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v 133 (557)
....|+|+.+++..... |. -...+.++|..+++........ ....+.+..+||+.++
T Consensus 130 ~~~SPDg~~la~~~~~~---------G~-------------~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSAS---------GS-------------DWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEECTTSSEEEEEEEET---------TC-------------SCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEE
T ss_pred EEECCCCCEEEEEEcCC---------CC-------------ceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEE
Confidence 34457998888776432 21 0125789999999987653221 1123345667998777
Q ss_pred EcCC
Q 041651 134 SGGY 137 (557)
Q Consensus 134 ~GG~ 137 (557)
++..
T Consensus 187 ~~~~ 190 (710)
T 2xdw_A 187 YNAY 190 (710)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7654
No 222
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=57.92 E-value=1.3e+02 Score=30.13 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=20.1
Q ss_pred CCcEEEEEcC--ceEEEeCCCCeEEEEe
Q 041651 233 DGNLFIFANT--RSILFDYKQNKVLKEY 258 (557)
Q Consensus 233 ~G~ifv~gg~--~~~~yDp~t~~W~~~~ 258 (557)
+|.+++.|+. ...+||.++++-.+.+
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 6788988875 4678999999866544
No 223
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=57.87 E-value=25 Score=37.85 Aligned_cols=130 Identities=13% Similarity=0.073 Sum_probs=68.3
Q ss_pred CCCCCceEecCCCCCcccccccceeccCCcEEEecCCCCcccccccccCCCcceEEEEcCCCCCCccCCCCCceecCC-c
Q 041651 383 EQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLN-E 461 (557)
Q Consensus 383 t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~~~~~RP~i~~~p-~ 461 (557)
.|.|++|+....+.......+..+.++||+|+++.-.. . ......|....|... ..| . .+| .
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~-----------~i~~~~~~~~~l~~~---~~~-~-~~~~~ 367 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T-----------GIRYANFNLAWLGGI---CAP-F-TIPDV 367 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S-----------EEEEEEECHHHHTBC---SCC-E-ECCCE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C-----------cceEEEecHHHhccc---cCC-C-cCccc
Confidence 45677997643222122222455567999999885322 1 223445666555432 112 1 333 4
Q ss_pred cccCCceEEEEEEeeccc--ccceEEEEEEcCCccccccCCCcceEEeEeEEEeecCcc-eEEEEEECCCCCCcCCCcce
Q 041651 462 TIGYKATFQVRFSVEEYL--SAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSY-VYHLAAVAPSTAEIAPPGYY 538 (557)
Q Consensus 462 ~~~~g~~~~v~~~~~~~~--~~~~~~v~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~-~~~~~~~~P~~~~~~ppG~y 538 (557)
++..|++++|++....+. .....+++|..+...+=.. .+.- ...|++ +-.++|++|.. +.+|.|
T Consensus 368 ~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~g~~~t~~~~vt~~~~---~~~g~y 434 (601)
T 1w8o_A 368 ALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG-------SVEP---LMPGRQAKGQVTITVPAG---TTPGRY 434 (601)
T ss_dssp EECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE-------EECC---BCTTCEEEEEEEEECCTT---CCCEEE
T ss_pred eecCCceeEEEEEEECCCceeccCceEEEecCCCcEEec-------cccc---cCCCCceEEEEEEecCCC---CCCCcE
Confidence 578898888777654431 1223577776665444111 1111 123422 22347788764 458999
Q ss_pred EEEE
Q 041651 539 LLFV 542 (557)
Q Consensus 539 mlf~ 542 (557)
+|=+
T Consensus 435 ~l~~ 438 (601)
T 1w8o_A 435 RVGA 438 (601)
T ss_dssp EEEE
T ss_pred EeeE
Confidence 8744
No 224
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=57.09 E-value=76 Score=32.16 Aligned_cols=19 Identities=16% Similarity=0.093 Sum_probs=16.0
Q ss_pred cCcceEEEecCCcEEEEcC
Q 041651 168 RWYATNQILPDGRIIIIGG 186 (557)
Q Consensus 168 R~y~s~~~L~dG~vyvvGG 186 (557)
-++|+++...||+||..|-
T Consensus 302 G~~ht~alt~~G~v~~wG~ 320 (423)
T 3mvd_K 302 GQHHTVILTTDLKCSVVGR 320 (423)
T ss_dssp CSSEEEEEETTCCEEEEEC
T ss_pred ccCeEEEEeCCCcEEEEEC
Confidence 4578888888999999984
No 225
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=56.13 E-value=34 Score=33.37 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=48.2
Q ss_pred eEEEEECCCCcEEECccCC-CcccccCeecCCCcEEEEcCCCCCCCe--EEEEcCCCCCCCceecCCcccccccCcceEE
Q 041651 98 HSILYDVATNAYRPLMVQT-DTWCSSGSVLPNGTLVQSGGYNDGDHV--VRTFTPCDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~--v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
.+.++|..+++++.+.... ...+...+..+||+.+++.....+... +.+||.. +.+...+.. ++ .+. .+
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---~g~~~~l~~-~~--~~~--~~ 288 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE---TLENEEVMV-MP--PCS--HL 288 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT---TCCEEEEEE-CC--SEE--EE
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC---CCCeEEeee-CC--CCC--CC
Confidence 3678899888887775521 222333456679986665544333334 9999987 555444322 22 222 44
Q ss_pred Eec-CCcEEEEcCc
Q 041651 175 ILP-DGRIIIIGGR 187 (557)
Q Consensus 175 ~L~-dG~vyvvGG~ 187 (557)
..+ ||++++.++.
T Consensus 289 ~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 289 MSNFDGSLMVGDGC 302 (396)
T ss_dssp EECSSSSEEEEEEC
T ss_pred ccCCCCceEEEecC
Confidence 456 8998777553
No 226
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=55.71 E-value=87 Score=33.89 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=50.9
Q ss_pred eEEEEECCCCcEEECccCC-Ccc---cccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcc-e
Q 041651 98 HSILYDVATNAYRPLMVQT-DTW---CSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYA-T 172 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~-~~~---c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~-s 172 (557)
.+.++|+.+++.+.+...+ ..+ ....+..+||++++++.. ++...++.+|.. .. ...+ ....+.. .
T Consensus 313 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~---~~-~~~l----~~~~~~v~~ 383 (741)
T 2ecf_A 313 DLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSK---GK-AAAL----THGNWSVDE 383 (741)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSS---SC-EEES----CCSSSCEEE
T ss_pred EEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCC---CC-eeee----eecceEEEe
Confidence 5789999998887654322 222 134567789998777764 455678888865 44 4443 2233322 2
Q ss_pred E-EEecCCcEE-EEcCcCCC-ceeEe
Q 041651 173 N-QILPDGRII-IIGGRRQF-NYEFY 195 (557)
Q Consensus 173 ~-~~L~dG~vy-vvGG~~~~-~~E~y 195 (557)
. ..-+||+.+ +.+..+.. ...+|
T Consensus 384 ~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 384 LLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp EEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred EeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 2 245688644 44443321 44555
No 227
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=55.58 E-value=1.6e+02 Score=28.88 Aligned_cols=93 Identities=13% Similarity=0.221 Sum_probs=46.1
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCC-----CCC--CCeEEEEcCCCCCCCcee-cC--Cccc-cc
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGY-----NDG--DHVVRTFTPCDDDQCDWI-EL--PQHL-SE 166 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~-----~~g--~~~v~~ydp~~~~t~~W~-~~--~~~m-~~ 166 (557)
.+.+||+.+++....-.. ...++.++-+||+.+.+... ..| ...+.+||+. +.+-. ++ .+.. ..
T Consensus 32 ~v~v~D~~t~~~~~~i~~--g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~---t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVPT--AFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD---KLTFEKEISLPPKRVQG 106 (361)
T ss_dssp EEEEEETTTCCEEEEEEC--CEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT---TCCEEEEEEECTTBCCB
T ss_pred eEEEEECCCCeEEEEecC--CCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECc---CCcEEEEEEcCcccccc
Confidence 478899888876432111 12224566678864444321 011 2468999987 43321 11 1000 01
Q ss_pred ccCcceEEEecCCcEEEEcCcC-CCceeEe
Q 041651 167 RRWYATNQILPDGRIIIIGGRR-QFNYEFY 195 (557)
Q Consensus 167 ~R~y~s~~~L~dG~vyvvGG~~-~~~~E~y 195 (557)
..+-...+.-+||+.+.+.... ..++.+|
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~ 136 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIV 136 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEE
Confidence 2333445666788755554332 3345555
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=54.20 E-value=1.3e+02 Score=27.61 Aligned_cols=138 Identities=14% Similarity=0.048 Sum_probs=70.2
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCC-cccccccCcceEEEe
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELP-QHLSERRWYATNQIL 176 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~-~~m~~~R~y~s~~~L 176 (557)
+.++|+....-+.+.........+.++.+ +|+||++-... ....+.++++. ...-..+. ..+. +-.+.+.-
T Consensus 103 I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d---g~~~~~~~~~~~~---~P~gia~d 175 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMD---GTNRRILAQDNLG---LPNGLTFD 175 (267)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-SSCEEEEEETT---SCCCEEEECTTCS---CEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-CCcEEEEEecC---CCCcEEEEECCCC---CCcEEEEc
Confidence 66777765433322211112233455666 68899885321 13578888876 22211111 1122 22234444
Q ss_pred cC-CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE--cCceEEEeCCCC
Q 041651 177 PD-GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA--NTRSILFDYKQN 252 (557)
Q Consensus 177 ~d-G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g--g~~~~~yDp~t~ 252 (557)
++ +++|+.--. ...+..+ +.. ... ...+. ...+|.....-+++||+.- ++...++|+.++
T Consensus 176 ~~~~~lyv~d~~-~~~I~~~~~~g-------~~~-~~~~~-------~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 176 AFSSQLCWVDAG-THRAECLNPAQ-------PGR-RKVLE-------GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp TTTTEEEEEETT-TTEEEEEETTE-------EEE-EEEEE-------CCCSEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCEEEEEECC-CCEEEEEecCC-------Cce-EEEec-------CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 43 678887532 2345555 320 110 00110 1235666555577899874 356788999998
Q ss_pred eEEEEec
Q 041651 253 KVLKEYP 259 (557)
Q Consensus 253 ~W~~~~p 259 (557)
+....++
T Consensus 240 ~~~~~i~ 246 (267)
T 1npe_A 240 KEMDTFH 246 (267)
T ss_dssp EEEEEEC
T ss_pred CceEEEc
Confidence 8766564
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=53.20 E-value=1.9e+02 Score=30.79 Aligned_cols=26 Identities=4% Similarity=0.179 Sum_probs=19.0
Q ss_pred eeCCcEEEEEc--CceEEEeC-CCCe--EEE
Q 041651 231 LPDGNLFIFAN--TRSILFDY-KQNK--VLK 256 (557)
Q Consensus 231 ~~~G~ifv~gg--~~~~~yDp-~t~~--W~~ 256 (557)
+.+|+||+... .....+|. ++++ |..
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEE
Confidence 45889998876 45788999 7764 543
No 230
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=52.97 E-value=44 Score=32.63 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=43.1
Q ss_pred eEEEEECCCCcEEECccCCC--c--c-cccCeecCCCcEEEEcCC-----C-CCCCeEEEEcCCCCCCCceecCCccccc
Q 041651 98 HSILYDVATNAYRPLMVQTD--T--W-CSSGSVLPNGTLVQSGGY-----N-DGDHVVRTFTPCDDDQCDWIELPQHLSE 166 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~--~--~-c~~~~~l~dG~i~v~GG~-----~-~g~~~v~~ydp~~~~t~~W~~~~~~m~~ 166 (557)
.+.+||+.+++.+.+..... . . ..+....+||+.+++.-. . .+...+.++|.. +.+-..+.. -..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~l~~-~~~ 340 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK---NGTQHRVAR-HDT 340 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT---TTEEEEEEE-CCC
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc---CCceEEecc-ccC
Confidence 37899999988776643221 0 0 112345678776554211 1 234678899987 544433321 110
Q ss_pred -------cc--CcceEEEecCCcEEEEcC
Q 041651 167 -------RR--WYATNQILPDGRIIIIGG 186 (557)
Q Consensus 167 -------~R--~y~s~~~L~dG~vyvvGG 186 (557)
.| .....+..+||+.+++..
T Consensus 341 ~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 341 SWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp CCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred cccccccccccCCCCccCCCCCCEEEEEe
Confidence 00 123345567997666544
No 231
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.89 E-value=25 Score=38.07 Aligned_cols=84 Identities=7% Similarity=-0.012 Sum_probs=51.2
Q ss_pred EEEEECCCCcEEECccCCCc-----ccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCce-----ecCCcccc---
Q 041651 99 SILYDVATNAYRPLMVQTDT-----WCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDW-----IELPQHLS--- 165 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~-----~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W-----~~~~~~m~--- 165 (557)
+.+||-++ .+..+. +++ ...+.+.-+||+.+++||.+ ..+++||.. +..- ..+.. +.
T Consensus 109 V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs~D---GtVkIWd~~---~~~l~~~~~i~l~t-i~~~~ 178 (588)
T 2j04_A 109 VSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGNED---GELQFFSIR---KNSENTPEFYFESS-IRLSD 178 (588)
T ss_dssp EEEEETTE-EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEETT---SEEEEEECC---CCTTTCCCCEEEEE-EECSC
T ss_pred EEEEeCCc-eeeecc--CCCccccccEEEEEEcCCCCEEEEEcCC---CEEEEEECC---CCccccccceeeee-eeccc
Confidence 67888544 444443 222 24456677899999999974 579999988 4321 11111 11
Q ss_pred --cccCcceEEEecCCcEEEEcCcCCCceeEe
Q 041651 166 --ERRWYATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 166 --~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
+..|-.+++-.+|| +++++.+. ++.+|
T Consensus 179 ~gh~~~V~sVawSPdg--Laass~D~-tVrlW 207 (588)
T 2j04_A 179 AGSKDWVTHIVWYEDV--LVAALSNN-SVFSM 207 (588)
T ss_dssp TTCCCCEEEEEEETTE--EEEEETTC-CEEEE
T ss_pred ccccccEEEEEEcCCc--EEEEeCCC-eEEEE
Confidence 23477778888888 56666553 45555
No 232
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=50.84 E-value=1.7e+02 Score=27.82 Aligned_cols=80 Identities=11% Similarity=0.103 Sum_probs=44.1
Q ss_pred EEEEECCCCcEEECccC----CCcccccCeecC-CCcEEEEcCCC--------------CCCCeEEEEcCCCCCCCceec
Q 041651 99 SILYDVATNAYRPLMVQ----TDTWCSSGSVLP-NGTLVQSGGYN--------------DGDHVVRTFTPCDDDQCDWIE 159 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~-dG~i~v~GG~~--------------~g~~~v~~ydp~~~~t~~W~~ 159 (557)
+..||+.+++.+.+... ...+....++.+ +|+||+.-... .....+.+||+. +.+...
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~ 179 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS---TKETTL 179 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT---TTEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC---CCEEEE
Confidence 45677776655544321 112334566778 89999974221 112468899997 555433
Q ss_pred CCcccccccCcceEEEecCCc-EEEE
Q 041651 160 LPQHLSERRWYATNQILPDGR-IIII 184 (557)
Q Consensus 160 ~~~~m~~~R~y~s~~~L~dG~-vyvv 184 (557)
....+. .-.+.+.-+||+ +||.
T Consensus 180 ~~~~~~---~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 180 LLKELH---VPGGAEVSADSSFVLVA 202 (322)
T ss_dssp EEEEES---CCCEEEECTTSSEEEEE
T ss_pred eccCCc---cCcceEECCCCCEEEEE
Confidence 221122 223456666776 6766
No 233
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=48.03 E-value=1.2e+02 Score=30.15 Aligned_cols=89 Identities=7% Similarity=0.002 Sum_probs=52.3
Q ss_pred cceEEEEECC---CCc--EE-ECccCC---------C-cccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceec
Q 041651 96 TAHSILYDVA---TNA--YR-PLMVQT---------D-TWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIE 159 (557)
Q Consensus 96 ~~~~~~yDp~---t~~--w~-~l~~~~---------~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~ 159 (557)
...+..||+. |++ |. .|.... . ..|...++..+|++||++-.. ...+.++||.......|..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~--~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG--MPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES--SCEEEEECTTSCCEEEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC--CCeEEEEeCCCCEEeeeee
Confidence 4568899988 554 43 232111 1 247778888999999987542 1568899997210122532
Q ss_pred CCcccccccCcceEEEecCCcEEEEcC
Q 041651 160 LPQHLSERRWYATNQILPDGRIIIIGG 186 (557)
Q Consensus 160 ~~~~m~~~R~y~s~~~L~dG~vyvvGG 186 (557)
..+.-.....+.+.+..+||+.+++-.
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEc
Confidence 211112223456777888898777644
No 234
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=47.26 E-value=82 Score=32.20 Aligned_cols=123 Identities=12% Similarity=0.122 Sum_probs=65.0
Q ss_pred CCCCCCCCCCceEEccCCcccceeEEEEeeCCe-EEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCC
Q 041651 29 VLPPYAGSQGEWNLLHESIGISAMHMQLLHDNR-VIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATN 107 (557)
Q Consensus 29 ~~~~~~~~~g~W~~~~~~~~~~~~h~~~~~~gk-v~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~ 107 (557)
.+..++...++...+.. ....+.+.++-++|+ ||+.+... ++ ....+..+++..
T Consensus 160 ~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~----------~~-------------~~~~v~~~~~~g- 214 (430)
T 3tc9_A 160 PTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQN----------NN-------------DRPNNYILTRES- 214 (430)
T ss_dssp EEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCS----------CT-------------TSEEEEEEEGGG-
T ss_pred cEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCC----------Cc-------------ccceEEEEeCCC-
Confidence 34455666666666543 234456666667776 66665321 10 011244455432
Q ss_pred cEE---ECccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCc-EE
Q 041651 108 AYR---PLMVQTDTWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGR-II 182 (557)
Q Consensus 108 ~w~---~l~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-vy 182 (557)
.|. .+.. ...+.+.++.+ +|.||+.-- +...+.+||+. +..-..+.. +....|-...+.-++|+ +|
T Consensus 215 ~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~---~~~~~~~~~-~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 215 GFKVITELTK--GQNCNGAETHPINGELYFNSW---NAGQVFRYDFT---TQETTPLFT-IQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp TSCSEEEEEE--CSSCCCEEECTTTCCEEEEET---TTTEEEEEETT---TTEEEEEEE-CSSSSCCEEEEECTTSSEEE
T ss_pred ceeeeeeecc--CCCceEEEEeCCCCEEEEEEC---CCCEEEEEECC---CCcEEEEEE-cCCCCcceeEEEcCCCCEEE
Confidence 332 2222 23345566777 899998742 23579999997 443322211 22222333566667888 88
Q ss_pred EEc
Q 041651 183 IIG 185 (557)
Q Consensus 183 vvG 185 (557)
++-
T Consensus 286 v~d 288 (430)
T 3tc9_A 286 IVV 288 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=46.98 E-value=1.8e+02 Score=27.12 Aligned_cols=122 Identities=9% Similarity=0.051 Sum_probs=55.7
Q ss_pred EEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecC
Q 041651 99 SILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPD 178 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~d 178 (557)
+.+|| .+++...................+|+|++. .. . +.+||+. + ...|.... .... ..+.+.. +
T Consensus 42 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~----~-l~~~d~~-g-~~~~~~~~---~~~~-~~~~~~~-~ 107 (330)
T 3hxj_A 42 LYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG-SD----K-VYAINPD-G-TEKWRFDT---KKAI-VSDFTIF-E 107 (330)
T ss_dssp TEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS-SC----E-EEEECCC-G-GGGGGSCC---------CCEEEE-T
T ss_pred EEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe-cC----c-EEEECCC-C-cEEEEEEC---CCCc-ccCceEE-C
Confidence 45677 555533222222222233444567887763 21 2 8889974 1 34564321 1111 1222333 8
Q ss_pred CcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc-CceEEEeCC
Q 041651 179 GRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN-TRSILFDYK 250 (557)
Q Consensus 179 G~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg-~~~~~yDp~ 250 (557)
|.||+.. .+ ..+..| +. + ...|..... . ..........+|+||+... ....+||++
T Consensus 108 ~~l~v~t-~~-~~l~~~d~~---g--~~~~~~~~~--~-------~~~~~~~~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 108 DILYVTS-MD-GHLYAINTD---G--TEKWRFKTK--K-------AIYATPIVSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp TEEEEEC-TT-SEEEEECTT---S--CEEEEEECS--S-------CCCSCCEECTTSCEEEECTTSEEEEECTT
T ss_pred CEEEEEe-cC-CEEEEEcCC---C--CEEEEEcCC--C-------ceeeeeEEcCCCEEEEEcCCCEEEEECCC
Confidence 8888743 22 223334 32 1 113432110 0 0011123344788887654 456789998
No 236
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=45.65 E-value=1.9e+02 Score=29.43 Aligned_cols=23 Identities=13% Similarity=0.118 Sum_probs=18.1
Q ss_pred CcEEEEEc-CceEEEeCCCCeEEE
Q 041651 234 GNLFIFAN-TRSILFDYKQNKVLK 256 (557)
Q Consensus 234 G~ifv~gg-~~~~~yDp~t~~W~~ 256 (557)
|+||+.-. +...++|+++++...
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~ 176 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDI 176 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCEEEEECCCCEEEE
Confidence 88988744 567889999988774
No 237
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=45.32 E-value=84 Score=30.72 Aligned_cols=49 Identities=4% Similarity=-0.095 Sum_probs=27.1
Q ss_pred eEEEEECC-CCcEEECccC---C-CcccccCeecCCCcEEEEcCCCCCCCeEEEEc
Q 041651 98 HSILYDVA-TNAYRPLMVQ---T-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFT 148 (557)
Q Consensus 98 ~~~~yDp~-t~~w~~l~~~---~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~yd 148 (557)
.+.+||.. +++.+.+... . .....+.++-+||+.+.+.+..+ ..+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEE
Confidence 47789987 7776543221 1 12222346678997655544322 4566664
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.89 E-value=1.3e+02 Score=28.93 Aligned_cols=76 Identities=9% Similarity=0.002 Sum_probs=44.6
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc---ccccccCcceEE
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ---HLSERRWYATNQ 174 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~---~m~~~R~y~s~~ 174 (557)
.+..||+.+++.+.+.... ...+.+..+||++++... ..+.+||+. +.+...+.. .....| -...+
T Consensus 72 ~i~~~d~~~~~~~~~~~~~--~v~~i~~~~dg~l~v~~~-----~gl~~~d~~---~g~~~~~~~~~~~~~~~~-~~~i~ 140 (326)
T 2ghs_A 72 ELHELHLASGRKTVHALPF--MGSALAKISDSKQLIASD-----DGLFLRDTA---TGVLTLHAELESDLPGNR-SNDGR 140 (326)
T ss_dssp EEEEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEET-----TEEEEEETT---TCCEEEEECSSTTCTTEE-EEEEE
T ss_pred EEEEEECCCCcEEEEECCC--cceEEEEeCCCeEEEEEC-----CCEEEEECC---CCcEEEEeeCCCCCCCCC-CCCEE
Confidence 3778999988776543222 222344567899888652 348899998 566554322 011112 23455
Q ss_pred EecCCcEEEE
Q 041651 175 ILPDGRIIII 184 (557)
Q Consensus 175 ~L~dG~vyvv 184 (557)
.-++|++|+.
T Consensus 141 ~d~~G~l~v~ 150 (326)
T 2ghs_A 141 MHPSGALWIG 150 (326)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEE
Confidence 5668888763
No 239
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=44.45 E-value=3.4e+02 Score=29.48 Aligned_cols=126 Identities=9% Similarity=-0.053 Sum_probs=63.3
Q ss_pred EEEEECCCCcEEECccC--C-CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCC-cccccccCcceEE
Q 041651 99 SILYDVATNAYRPLMVQ--T-DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELP-QHLSERRWYATNQ 174 (557)
Q Consensus 99 ~~~yDp~t~~w~~l~~~--~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~-~~m~~~R~y~s~~ 174 (557)
..+||+.+++++.+... . .....+.....+|+|++.. . ..+.+|||. +.++.... +.|+... -.+.+
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~Gl~~~~~~---~~~~~~~~~~gl~~~~-i~~i~ 565 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----GGVMRINPK---DESQQSISFGSFSNNE-ILSMT 565 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----TEEEEECC-----CCCCBCCCCC---CC-EEEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----CceEEEecC---CCceEEecccCCCccc-eEEEE
Confidence 67899999999876321 1 1111223445679999753 2 248889998 56655432 1143221 22233
Q ss_pred EecCCcEEEEcCcCCCceeEe-cCCCCCCCCCceeeecccccccccccCCccce-EEEeeCCcEEEEEcCceEEEeCCC
Q 041651 175 ILPDGRIIIIGGRRQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPF-VHLLPDGNLFIFANTRSILFDYKQ 251 (557)
Q Consensus 175 ~L~dG~vyvvGG~~~~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~-~~~~~~G~ifv~gg~~~~~yDp~t 251 (557)
..+|++++... . ..-.| |.+. +..... + +...+.. .....+|+||.-+.+....|||+.
T Consensus 566 -~~~g~lWi~t~-~--Gl~~~~~~~~------~~~~~~-~-------~~~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 566 -CVKNSIWVSTT-N--GLWIIDRKTM------DARQQN-M-------TNKRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp -EETTEEEEEES-S--CEEEEETTTC------CEEEC----------CCCCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred -ECCCCEEEECC-C--CeEEEcCCCc------eeEEec-C-------CCCceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 34788887542 2 23445 6521 211111 0 0111222 233458999877777778899974
No 240
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=42.68 E-value=3.1e+02 Score=30.08 Aligned_cols=39 Identities=13% Similarity=-0.050 Sum_probs=25.7
Q ss_pred EcCCCCCCCceEecCCCCCc--ccccccceeccCCcEEEec
Q 041651 379 YRPSEQTSRRFSVMEPSTRP--RMYHSSAILLTDGRVLIGG 417 (557)
Q Consensus 379 YDP~t~~g~~W~~~~~~~~~--R~yhs~a~llpdG~V~v~G 417 (557)
++-.++.|++|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 46667778899876444332 2444566677999988764
No 241
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=40.04 E-value=93 Score=31.50 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=38.1
Q ss_pred eeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCCCC
Q 041651 342 MGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPH 421 (557)
Q Consensus 342 ~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~~~ 421 (557)
.|.+++.-||+||..|-...|.-|.....+....+..-..-.+ +...++ +-.+|+ ++|..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia----~G~~hs-~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVG----CGEVCS-YAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEE----EETTEE-EEEETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEE----cCCCeE-EEEcCCCCEEEECCCCC
Confidence 4556667799999999654443222111111111111111111 233221 234675 44578999999998765
Q ss_pred c
Q 041651 422 I 422 (557)
Q Consensus 422 ~ 422 (557)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 4
No 242
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=39.92 E-value=1.6e+02 Score=31.55 Aligned_cols=87 Identities=17% Similarity=0.072 Sum_probs=49.7
Q ss_pred CcceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCC--CCeEEEEcCCCCCCCceecCCcccccccCcce
Q 041651 95 CTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDG--DHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172 (557)
Q Consensus 95 ~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g--~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s 172 (557)
+...+..+|...+..+.+...........+..+||+.+++.+..++ ...++.+|.. +.+...+. ......+
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~l~----~~~~~~~ 405 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK---GGKTKDLT----PESGMHR 405 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT---CCCCEESC----CSSSEEE
T ss_pred CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC---CCCceecc----CCCceEE
Confidence 3445667777777777775432111111355678876655544333 3477888877 54444332 2333456
Q ss_pred EEEecCCcEEEEcCcC
Q 041651 173 NQILPDGRIIIIGGRR 188 (557)
Q Consensus 173 ~~~L~dG~vyvvGG~~ 188 (557)
++.-+||+.+++...+
T Consensus 406 ~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 406 TQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEECTTSSEEEEEEEC
T ss_pred EEECCCCCEEEEEecC
Confidence 6667799988776543
No 243
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=37.84 E-value=2.2e+02 Score=30.36 Aligned_cols=85 Identities=11% Similarity=-0.028 Sum_probs=51.0
Q ss_pred ceEEEEECCCCcEEECccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccc-------
Q 041651 97 AHSILYDVATNAYRPLMVQT--DTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSER------- 167 (557)
Q Consensus 97 ~~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~------- 167 (557)
..+.+||..+++.+.+.... .......+.-+||+.++++.. ..++++|.. +.+-..+...-...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~---~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHV---GKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSS---SSCCEEEECCCBTTTEEEEEC
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECC---CCceEEEecCCCCCceECccc
Confidence 45889999998877665432 222334566789988888764 478889887 43332221100000
Q ss_pred ---------cCcceEEEecCCcEEEEcCcC
Q 041651 168 ---------RWYATNQILPDGRIIIIGGRR 188 (557)
Q Consensus 168 ---------R~y~s~~~L~dG~vyvvGG~~ 188 (557)
....+.+--+||+.++.+..+
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 012355666899988877644
No 244
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=37.76 E-value=1.4e+02 Score=32.26 Aligned_cols=84 Identities=8% Similarity=0.037 Sum_probs=45.8
Q ss_pred eEEEEECCCCcE--------EECc---cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc----eecCCc
Q 041651 98 HSILYDVATNAY--------RPLM---VQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCD----WIELPQ 162 (557)
Q Consensus 98 ~~~~yDp~t~~w--------~~l~---~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~----W~~~~~ 162 (557)
.+.+||..++.- ..+. ..+..+..+.+..+|| ++++|.+ +.+++||.. .+. |..+.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D---~tVrlWd~~---~~~~~~~~~tL~- 222 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN---NSVFSMTVS---ASSHQPVSRMIQ- 222 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT---CCEEEECCC---SSSSCCCEEEEE-
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC---CeEEEEECC---CCccccceeeec-
Confidence 488999988742 2321 1123344556777899 5555542 689999987 333 22221
Q ss_pred ccccccCcceEEEecCCcEEEEcCcCCCceeEe
Q 041651 163 HLSERRWYATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 163 ~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
...|..-..+... |..+++++. .++.+|
T Consensus 223 --~~h~~~V~svaFs-g~~LASa~~--~tIkLW 250 (588)
T 2j04_A 223 --NASRRKITDLKIV-DYKVVLTCP--GYVHKI 250 (588)
T ss_dssp --CCCSSCCCCEEEE-TTEEEEECS--SEEEEE
T ss_pred --ccccCcEEEEEEE-CCEEEEEeC--CeEEEE
Confidence 1223222223333 567777763 466677
No 245
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=37.47 E-value=1.1e+02 Score=30.77 Aligned_cols=89 Identities=13% Similarity=0.225 Sum_probs=46.9
Q ss_pred eEEEEECCCCc-EEECcc--CCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcce
Q 041651 98 HSILYDVATNA-YRPLMV--QTDTWCSSGSVLPNGT-LVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYAT 172 (557)
Q Consensus 98 ~~~~yDp~t~~-w~~l~~--~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s 172 (557)
.+.+||..+.. ...+.. .+.....+.+..+++. ++++|+.. ..+.+||.. ... ..+.. +. ....-.+
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~---~~~-~~~~~-~~~h~~~v~~ 326 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLR---NLK-LKLHS-FESHKDEIFQ 326 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETT---CTT-SCSEE-EECCSSCEEE
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCC---CCC-CCeEE-eecCCCCEEE
Confidence 47789988652 111111 1222223345566775 88888863 579999987 311 01111 22 2223344
Q ss_pred EEEecCC-cEEEEcCcCCCceeEe
Q 041651 173 NQILPDG-RIIIIGGRRQFNYEFY 195 (557)
Q Consensus 173 ~~~L~dG-~vyvvGG~~~~~~E~y 195 (557)
++..++| .+++.||.++ .+.+|
T Consensus 327 i~~sp~~~~~l~s~~~d~-~i~iw 349 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDR-RLHVW 349 (430)
T ss_dssp EEECSSCTTEEEEEETTS-CCEEE
T ss_pred EEECCCCCCEEEEEeCCC-cEEEE
Confidence 5555677 5788887654 34444
No 246
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=37.22 E-value=1.7e+02 Score=29.78 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=35.8
Q ss_pred cccccCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCce-ecCCcccccccCcceEEEecCCc-EEEE
Q 041651 118 TWCSSGSVLP-NGTLVQSGGYNDGDHVVRTFTPCDDDQCDW-IELPQHLSERRWYATNQILPDGR-IIII 184 (557)
Q Consensus 118 ~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W-~~~~~~m~~~R~y~s~~~L~dG~-vyvv 184 (557)
.++.+.++.+ +|.||+.-- +...+++||+. +.+- +.+.. .....+....+.-++|+ +|+.
T Consensus 228 ~~P~giavd~~~G~lyv~d~---~~~~V~~~d~~---~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRY---HHAMISSYDPA---TGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp SSBCCCEECTTTCCEEECBT---TCSEEEEECTT---TCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEEC---CCCEEEEEECC---CCeEEEEEec-cCCCCCcccEEEeCCCCEEEEE
Confidence 3455677777 899998743 23579999997 4443 22211 11122333466667786 8876
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=37.16 E-value=1.1e+02 Score=33.21 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=50.7
Q ss_pred ccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCC--------ceeeeEEEcCCCeEEEEcCcC
Q 041651 290 QAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLP--------RVMGDMILLPNGDVIIINGAQ 360 (557)
Q Consensus 290 ~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~--------R~~~~~v~lpdG~I~vvGG~~ 360 (557)
+++||+.... ..+..+|..+....|+.. ..+.. ....+ +++-+++||+... +
T Consensus 66 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~-d 126 (668)
T 1kv9_A 66 DGVIYTSMSW-----------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDKVYVGTL-D 126 (668)
T ss_dssp TTEEEEEEGG-----------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTEEEEECT-T
T ss_pred CCEEEEECCC-----------------CeEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCEEEEEcC-C
Confidence 8899887542 223455655545668764 22211 01112 2334888887532 1
Q ss_pred CCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEecCC
Q 041651 361 LGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~GG~ 419 (557)
+ .+..+|++|.. ..|+.-..-.........+.++.+|+||+..+.
T Consensus 127 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 127 -G------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 1 57889998762 268754321111122223334458999986543
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=36.78 E-value=1.3e+02 Score=32.82 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=40.7
Q ss_pred EEEEECCCCc--EEECccCC-----Ccccc---cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccccccc
Q 041651 99 SILYDVATNA--YRPLMVQT-----DTWCS---SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERR 168 (557)
Q Consensus 99 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R 168 (557)
+..+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|..++ ...|+.-... ....
T Consensus 78 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG-~~~W~~~~~~-~~~~ 151 (668)
T 1kv9_A 78 VIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAKTG-KAIWSQQTTD-PAKP 151 (668)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETTTC-CEEEEEECSC-TTSS
T ss_pred EEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECCCC-CEeeeeccCC-CCCc
Confidence 6678887766 66432111 12231 2234457777775432 46889998854 4568753210 1111
Q ss_pred C-cceEEEecCCcEEEE
Q 041651 169 W-YATNQILPDGRIIII 184 (557)
Q Consensus 169 ~-y~s~~~L~dG~vyvv 184 (557)
+ ..+.-++.+|+||+.
T Consensus 152 ~~~~~~P~v~~~~v~vg 168 (668)
T 1kv9_A 152 YSITGAPRVVKGKVIIG 168 (668)
T ss_dssp CBCCSCCEEETTEEEEC
T ss_pred ceecCCCEEECCEEEEe
Confidence 1 111223347888874
No 249
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=36.46 E-value=1.4e+02 Score=32.68 Aligned_cols=97 Identities=19% Similarity=0.197 Sum_probs=50.7
Q ss_pred ccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCC--------ceeeeEEEcCCCeEEEEcCcC
Q 041651 290 QAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLP--------RVMGDMILLPNGDVIIINGAQ 360 (557)
Q Consensus 290 ~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~--------R~~~~~v~lpdG~I~vvGG~~ 360 (557)
+++||++... ..+..+|..+....|+.. ..... ....+ +++-+|+||+... +
T Consensus 70 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~v~v~~~-d 130 (689)
T 1yiq_A 70 DGVMYTTGPF-----------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRG-VAVWKGKVYVGVL-D 130 (689)
T ss_dssp TTEEEEECGG-----------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEETTEEEEECT-T
T ss_pred CCEEEEEcCC-----------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCc-cEEECCEEEEEcc-C
Confidence 8899887542 224455655555678764 22210 01112 2334888887532 1
Q ss_pred CCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcc-cccccceeccCCcEEEecCC
Q 041651 361 LGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPR-MYHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R-~yhs~a~llpdG~V~v~GG~ 419 (557)
+ .+..+|.+|.. ..|+.-......+ .....+.++.+|+||+..+.
T Consensus 131 -g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~ 176 (689)
T 1yiq_A 131 -G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGG 176 (689)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeCC
Confidence 1 56889998762 2587543211111 12223334459999986543
No 250
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=35.03 E-value=2e+02 Score=27.74 Aligned_cols=50 Identities=12% Similarity=0.021 Sum_probs=35.5
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+.++|+.+++.+.+...+.....+...-+||+.+++.... ..+.++|..
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~ 110 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA 110 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 57889999999888865443322234567899887776642 578899988
No 251
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=34.93 E-value=2e+02 Score=32.91 Aligned_cols=82 Identities=15% Similarity=0.042 Sum_probs=53.5
Q ss_pred eEE-EEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSI-LYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~-~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.+. +||..+++.+.+. .+.......+.-+||+.++++... ..+.+||.. +.+-..+.. .......+.+.-
T Consensus 359 ~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~---tg~~~~~~~--~~~~~v~~~~~S 429 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLE---TGKPTVIER--SREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEE--CSSSCCCCEEEC
T ss_pred ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECC---CCceEEecc--CCCCCccceEEC
Confidence 455 7899888887776 333344455677899999888653 579999998 554433211 122233456667
Q ss_pred cCCcEEEEcCcC
Q 041651 177 PDGRIIIIGGRR 188 (557)
Q Consensus 177 ~dG~vyvvGG~~ 188 (557)
+||+.++.++.+
T Consensus 430 pDG~~la~~~~~ 441 (1045)
T 1k32_A 430 DNSRFIAYGFPL 441 (1045)
T ss_dssp TTSCEEEEEEEE
T ss_pred CCCCeEEEEecC
Confidence 899988777653
No 252
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=34.44 E-value=80 Score=31.16 Aligned_cols=74 Identities=16% Similarity=0.029 Sum_probs=43.6
Q ss_pred ceEEEEECCCCcEEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCccc-ccccCcceEEE
Q 041651 97 AHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHL-SERRWYATNQI 175 (557)
Q Consensus 97 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m-~~~R~y~s~~~ 175 (557)
..+.+||.++++-...-.... ..+.++.+||+.+.+.+. +++.+||.. +.+=+.+.. + ..++.-...+.
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~---t~~l~~~~~-i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS---QPEPKLLRT-IEGAAEASLQVQF 355 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS---SSSCEEEEE-ETTSCSSEEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC---CCcceeeEE-eccCCCCcEEEEe
Confidence 368899999887543222222 556677889886666552 689999987 441133322 2 23443334555
Q ss_pred ecCCc
Q 041651 176 LPDGR 180 (557)
Q Consensus 176 L~dG~ 180 (557)
.+||+
T Consensus 356 ~p~G~ 360 (361)
T 2oiz_A 356 HPVGG 360 (361)
T ss_dssp CCCSC
T ss_pred cCCCC
Confidence 56654
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=34.28 E-value=3.5e+02 Score=28.75 Aligned_cols=27 Identities=26% Similarity=0.438 Sum_probs=20.1
Q ss_pred EeeCCcEEEEEc-CceEEEeCCCCe--EEE
Q 041651 230 LLPDGNLFIFAN-TRSILFDYKQNK--VLK 256 (557)
Q Consensus 230 ~~~~G~ifv~gg-~~~~~yDp~t~~--W~~ 256 (557)
++.+|+||+... .....+|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 346899999887 557889998764 654
No 254
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=34.07 E-value=4.5e+02 Score=27.82 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=21.4
Q ss_pred EEeeCCcEEEEEc---CceEEEeCCCCeEEEEe
Q 041651 229 HLLPDGNLFIFAN---TRSILFDYKQNKVLKEY 258 (557)
Q Consensus 229 ~~~~~G~ifv~gg---~~~~~yDp~t~~W~~~~ 258 (557)
...++|+.|+++. +...++|.++++-...+
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 4567898766654 45788999999866444
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=33.65 E-value=1.4e+02 Score=28.41 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=33.4
Q ss_pred eEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCcccccccceeccCCcEEEec
Q 041651 344 DMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGG 417 (557)
Q Consensus 344 ~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~llpdG~V~v~G 417 (557)
+.++-+||++||......+ ..+..||+.+. +.+.+...+..|.-.+.+. .+++++|++-
T Consensus 76 gia~~~dG~l~vad~~~~~-----------~~v~~~d~~~g---~~~~~~~~~~~~~~~g~~~-~~~~~~~v~d 134 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNADS-----------IPVVSLVKSDG---TVETLLTLPDAIFLNGITP-LSDTQYLTAD 134 (306)
T ss_dssp EEEECTTSCEEEEEECTTS-----------CEEEEEECTTS---CEEEEEECTTCSCEEEEEE-SSSSEEEEEE
T ss_pred eEEEcCCCcEEEEeccCCc-----------ceEEEEcCCCC---eEEEEEeCCCccccCcccc-cCCCcEEEEE
Confidence 4456689999997632210 13567888777 6665544433444343332 3555666653
No 256
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=32.89 E-value=45 Score=30.19 Aligned_cols=33 Identities=30% Similarity=0.820 Sum_probs=24.4
Q ss_pred ceEEEEEECCCCCCcCCCcceEEEEEc-----------CC----------CCCccEEEEc
Q 041651 518 YVYHLAAVAPSTAEIAPPGYYLLFVVH-----------AE----------IPSSGMWVKM 556 (557)
Q Consensus 518 ~~~~~~~~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~a~~v~v 556 (557)
|.++-.+++| --|||||+|-| +| ||..+-||.|
T Consensus 278 gaftksitlp------ktgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 278 GAFTKSITLP------KTGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp TEEEEEEECS------SSEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred ceeeeeeecc------CcceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 4566667777 45999999853 22 8888999887
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=32.13 E-value=1.2e+02 Score=32.32 Aligned_cols=78 Identities=10% Similarity=0.031 Sum_probs=43.9
Q ss_pred ceEEEEECCCCc--EEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEE
Q 041651 97 AHSILYDVATNA--YRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 97 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
..+..+|+.|++ |+.-. . .....+.....+|.||+ |.. + ..+..||..++ ...|+.- +...-+...++
T Consensus 444 g~l~a~D~~tG~~~W~~~~-~-~~~~~~~~~t~gg~v~~-g~~-d--g~l~a~D~~tG-~~lw~~~---~~~~~~~~p~~ 513 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWE-K-FAAWGGTLYTKGGLVWY-ATL-D--GYLKALDNKDG-KELWNFK---MPSGGIGSPMT 513 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE-S-SCCCSBCEEETTTEEEE-ECT-T--SEEEEEETTTC-CEEEEEE---CSSCCCSCCEE
T ss_pred CeEEEEECCCCCEEEEecC-C-CCccceeEEECCCEEEE-EcC-C--CeEEEEECCCC-CEEEEEe---CCCCcEeeeEE
Confidence 568899999877 65421 1 11222333445677777 432 2 57899998854 4567642 22222222233
Q ss_pred EecCCcEEEE
Q 041651 175 ILPDGRIIII 184 (557)
Q Consensus 175 ~L~dG~vyvv 184 (557)
...||++||.
T Consensus 514 ~~~~G~~yv~ 523 (571)
T 2ad6_A 514 YSFKGKQYIG 523 (571)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 2259999986
No 258
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=31.46 E-value=2.6e+02 Score=27.72 Aligned_cols=121 Identities=9% Similarity=-0.038 Sum_probs=62.5
Q ss_pred CCceEEccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCC
Q 041651 37 QGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQT 116 (557)
Q Consensus 37 ~g~W~~~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~ 116 (557)
..+.+.++.. -..+.+++.+++|++|+..... |+ +..+++.+++.+.+....
T Consensus 21 ~~~~~~va~g-L~~P~~ia~~pdG~llVter~~----------G~-----------------I~~v~~~~g~~~~v~~~~ 72 (347)
T 3das_A 21 VKVLRTVATG-LNSPWGLAPLPGGDLLVSSRDE----------AT-----------------ITRVDAKTGRKTELGEVP 72 (347)
T ss_dssp EEEEEEEECC-CSSEEEEEECTTSCEEEEETTT----------CE-----------------EEEECTTTCCEEEEEECT
T ss_pred CceeEEeecC-CCCceEEEEcCCCcEEEEEecC----------CE-----------------EEEEECCCCcEeeecccC
Confidence 3455566542 2456788888999999887521 32 455666555554443221
Q ss_pred Cccc------ccCeecC----CCcEEEE--cCCCCCCCeEEEEcCCCCC--CCceec---CCccccc--ccCcceEEEec
Q 041651 117 DTWC------SSGSVLP----NGTLVQS--GGYNDGDHVVRTFTPCDDD--QCDWIE---LPQHLSE--RRWYATNQILP 177 (557)
Q Consensus 117 ~~~c------~~~~~l~----dG~i~v~--GG~~~g~~~v~~ydp~~~~--t~~W~~---~~~~m~~--~R~y~s~~~L~ 177 (557)
..+. .+.++-+ ||.||+. ... .+.+.+|....++ ..+..+ +-..++. ..+-...+.-+
T Consensus 73 ~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~---~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp 149 (347)
T 3das_A 73 GVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS---DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP 149 (347)
T ss_dssp TCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS---SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT
T ss_pred ceeecCCCCceeeEeccccccCCEEEEEEecCC---CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC
Confidence 1111 1233333 5889985 111 2457777654210 012211 1001322 23334467778
Q ss_pred CCcEEEEcCcC
Q 041651 178 DGRIIIIGGRR 188 (557)
Q Consensus 178 dG~vyvvGG~~ 188 (557)
||++||.=|..
T Consensus 150 DG~Lyvt~Gd~ 160 (347)
T 3das_A 150 DKMLYAGTGES 160 (347)
T ss_dssp TSCEEEECBCT
T ss_pred CCCEEEEECCC
Confidence 99999986643
No 259
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=30.40 E-value=2.9e+02 Score=25.80 Aligned_cols=48 Identities=19% Similarity=0.030 Sum_probs=28.1
Q ss_pred eEEEEECCCCcEEECcc---CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 041651 98 HSILYDVATNAYRPLMV---QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPC 150 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~---~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 150 (557)
.+..||...+....... .......+.++..+|+|++..+ ..+.+|||.
T Consensus 216 ~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-----~gv~~~~~~ 266 (305)
T 3dr2_A 216 EITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-----TGVCVFDSD 266 (305)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-----SEEEEECTT
T ss_pred EEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-----CcEEEECCC
Confidence 46778876554322111 1122233456677899888763 359999997
No 260
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=29.79 E-value=2e+02 Score=30.54 Aligned_cols=125 Identities=9% Similarity=0.036 Sum_probs=63.4
Q ss_pred CCcEEECccCCCcccc-cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCc--ccccccCcceEEEe------
Q 041651 106 TNAYRPLMVQTDTWCS-SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQ--HLSERRWYATNQIL------ 176 (557)
Q Consensus 106 t~~w~~l~~~~~~~c~-~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~--~m~~~R~y~s~~~L------ 176 (557)
-.+|+.........|. ..+.+.||+|++..-.........++--.++ ..+|++... .|+.+....++..+
T Consensus 199 G~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~Dg-G~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~ 277 (601)
T 1w8o_A 199 GRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVSTDG-GHSYGPVTIDRDLPDPTNNASIIRAFPDAPA 277 (601)
T ss_dssp TSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEEEEESST-TSCCCCCEEEEEEECSSCCCEEEESSTTCCT
T ss_pred CcCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEcCC-CCCCCCCeecCcCCCCCccceEEEecccccC
Confidence 3568876543322222 2344679999986543211123334433322 578987531 25555544444433
Q ss_pred --cCCcEEEEcCcCC----CceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEE
Q 041651 177 --PDGRIIIIGGRRQ----FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFA 240 (557)
Q Consensus 177 --~dG~vyvvGG~~~----~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~g 240 (557)
.++.+++++.... ....++ ... . ..+|.....+.. ....||.+..++||+|++..
T Consensus 278 ~~~~~~~l~~~~~~~~~~R~~~~l~~S~D-~---G~tW~~~~~l~~-----~~~~Y~~l~~~~dg~i~~~y 339 (601)
T 1w8o_A 278 GSARAKVLLFSNAASQTSRSQGTIRMSCD-D---GQTWPVSKVFQP-----GSMSYSTLTALPDGTYGLLY 339 (601)
T ss_dssp TCSGGGCEEEEEECCSSSSEEEEEEEESS-T---TSCCCEEEEEEE-----EECCCEEEEECTTSCEEEEE
T ss_pred CCCCCCEEEEECCCCCCcccceEEEEeCC-C---CCCCCCceEeCC-----CCCCCCeEEEcCCCeEEEEE
Confidence 2445555554221 112334 332 1 346754322221 12458998889999999764
No 261
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=29.24 E-value=1.2e+02 Score=31.36 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=18.9
Q ss_pred ceEEccCCcccceeEEEEeeCCeEEEEee
Q 041651 39 EWNLLHESIGISAMHMQLLHDNRVIMFDR 67 (557)
Q Consensus 39 ~W~~~~~~~~~~~~h~~~~~~gkv~~~gg 67 (557)
+.+.++.. -..+..++.+++|++||...
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~ 45 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTER 45 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEET
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEc
Confidence 44555432 23467788889999998864
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=28.98 E-value=1.4e+02 Score=31.94 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=43.2
Q ss_pred ceEEEEECCCCc--EEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEE
Q 041651 97 AHSILYDVATNA--YRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 97 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
..+..+|+.|++ |+.-.. .....+..+..+|.||+ |.. + ..++.||..++ ...|+.- +...-...-++
T Consensus 466 G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~-g~~-d--g~l~A~D~~tG-~~lW~~~---~~~g~~a~P~~ 535 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFT-GTG-D--GYFKAFDAKSG-KELWKFQ---TGSGIVSPPIT 535 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEE-ECT-T--SEEEEEETTTC-CEEEEEE---CSSCCCSCCEE
T ss_pred ceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEE-ECC-C--CcEEEEECCCC-CEEEEec---CCCCcccCceE
Confidence 457789999887 654221 12223334445666666 433 3 57899999843 4458642 22222111122
Q ss_pred EecCCcEEEE
Q 041651 175 ILPDGRIIII 184 (557)
Q Consensus 175 ~L~dG~vyvv 184 (557)
...||++||+
T Consensus 536 y~~~G~qYv~ 545 (582)
T 1flg_A 536 WEQDGEQYLG 545 (582)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 2249999987
No 263
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=28.55 E-value=1.1e+02 Score=33.50 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=50.3
Q ss_pred ccEEEEEcCCCCccccccccccccccCCceEEEEecCCCCcceee-cCCCC--------ceeeeEEEcCCCeEEEEcCcC
Q 041651 290 QAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVME-EMPLP--------RVMGDMILLPNGDVIIINGAQ 360 (557)
Q Consensus 290 ~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~--------R~~~~~v~lpdG~I~vvGG~~ 360 (557)
+++||++... +.+..+|..+....|+.. ..... ....+ +.+-+++||+... +
T Consensus 77 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~v~v~~~-d 137 (677)
T 1kb0_A 77 DGIMYVSASW-----------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRG-VALWKGKVYVGAW-D 137 (677)
T ss_dssp TTEEEEECGG-----------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCC-CEEETTEEEEECT-T
T ss_pred CCEEEEECCC-----------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCC-ceEECCEEEEEcC-C
Confidence 8899987542 233445555444568765 32210 01122 2334888887532 1
Q ss_pred CCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccc-ccccceeccCCcEEEecCC
Q 041651 361 LGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRM-YHSSAILLTDGRVLIGGSN 419 (557)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~-yhs~a~llpdG~V~v~GG~ 419 (557)
..+.++|.++.. ..|+.-......+. ....+.++.+|+||+..+.
T Consensus 138 -------------g~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 -------------GRLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp -------------SEEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred -------------CEEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 146889998762 25875322011111 1122334458999887653
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=27.95 E-value=1.3e+02 Score=32.30 Aligned_cols=78 Identities=8% Similarity=0.028 Sum_probs=43.2
Q ss_pred ceEEEEECCCCc--EEECccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEE
Q 041651 97 AHSILYDVATNA--YRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQ 174 (557)
Q Consensus 97 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~ 174 (557)
..+..+|+.|++ |+.-... ....+..+..+|.||+ |.. + ..++.||..++ ...|+.- +...-...-++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~-gt~-d--g~l~A~D~~tG-~~lW~~~---l~~g~~~~P~~ 522 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFY-GTL-D--GYLKARDSDTG-DLLWKFK---IPSGAIGYPMT 522 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT-T--SEEEEEETTTC-CEEEEEE---CSSCCCSCCEE
T ss_pred CeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEE-ECC-C--CeEEEEECCCC-CEEEEee---CCCCcEeccEE
Confidence 457788999887 6542111 1222333445666666 432 2 47899999854 4568651 33322211122
Q ss_pred EecCCcEEEE
Q 041651 175 ILPDGRIIII 184 (557)
Q Consensus 175 ~L~dG~vyvv 184 (557)
...||++||+
T Consensus 523 y~~~G~qyv~ 532 (599)
T 1w6s_A 523 YTHKGTQYVA 532 (599)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCEEEEE
Confidence 2249999986
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=26.62 E-value=2.7e+02 Score=29.80 Aligned_cols=82 Identities=10% Similarity=0.149 Sum_probs=41.3
Q ss_pred EEEEEC-CCCc--EEECccCC-----Ccccc---cCeec--CCCc----EEEEcCCCCCCCeEEEEcCCCCCCCceecCC
Q 041651 99 SILYDV-ATNA--YRPLMVQT-----DTWCS---SGSVL--PNGT----LVQSGGYNDGDHVVRTFTPCDDDQCDWIELP 161 (557)
Q Consensus 99 ~~~yDp-~t~~--w~~l~~~~-----~~~c~---~~~~l--~dG~----i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~ 161 (557)
+..+|. +|++ |+.-.... ..+|. .+..+ .+|+ ||+.... ..+..+|..++ ...|..-.
T Consensus 75 v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d----g~l~AlDa~TG-~~~W~~~~ 149 (599)
T 1w6s_A 75 TFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD----GNVAALNAETG-ETVWKVEN 149 (599)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT----SEEEEEETTTC-CEEEEEEC
T ss_pred EEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC----CEEEEEECCCC-CEEEeecC
Confidence 667888 7766 66432211 12332 22344 5777 8775432 46888998854 45687522
Q ss_pred cccccccCcceEEEecCCcEEEEc
Q 041651 162 QHLSERRWYATNQILPDGRIIIIG 185 (557)
Q Consensus 162 ~~m~~~R~y~s~~~L~dG~vyvvG 185 (557)
..........+.-++.+|+||+-.
T Consensus 150 ~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 150 SDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp CCGGGTCBCCSCCEEETTEEEECC
T ss_pred CCCCccceeecCCEEECCEEEEEe
Confidence 111111111122233488887643
No 266
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=26.05 E-value=1.8e+02 Score=27.44 Aligned_cols=104 Identities=14% Similarity=0.286 Sum_probs=58.0
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccC--cceEEEecCCcEEEEcCcCCCceeEe-cCCCC
Q 041651 124 SVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRW--YATNQILPDGRIIIIGGRRQFNYEFY-PKSDE 200 (557)
Q Consensus 124 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~--y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~ 200 (557)
++-+||.||++ . + ..+...+|.+++...|...+..+-..=| .-++..-++|.+|++ .++ .+-.. |.++
T Consensus 47 af~P~G~LYaV--~-~--G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG-~iyr~~pP~~- 117 (236)
T 1tl2_A 47 FLSPGGELYGV--L-N--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKD-KLYKASPPQS- 117 (236)
T ss_dssp EECTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETT-EEEEESCCCS-
T ss_pred EECCCccEEEE--e-C--CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCC-EEEEeCCCcC-
Confidence 44469999999 2 2 3588888865446778765432211111 234555678999998 442 22122 3321
Q ss_pred CCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEc
Q 041651 201 DLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFAN 241 (557)
Q Consensus 201 ~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg 241 (557)
..+.|......... -.+.-+.+++..++|.||++.+
T Consensus 118 --~~~~Wl~~a~~vg~---~gw~~~~~lff~p~G~Lyav~d 153 (236)
T 1tl2_A 118 --DTDNWIARATEVGS---GGWSGFKFLFFHPNGYLYAVHG 153 (236)
T ss_dssp --TTCCHHHHSEEEEC---SSGGGEEEEEECTTSCEEEEET
T ss_pred --CCCceeccccEecc---CCCCceEEEEECCCceEEEEeC
Confidence 13466421111111 0123467788889999998873
No 267
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=24.89 E-value=25 Score=35.13 Aligned_cols=54 Identities=7% Similarity=0.068 Sum_probs=23.2
Q ss_pred eEEEEecCCCCcceeecCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceE
Q 041651 319 CGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFS 390 (557)
Q Consensus 319 ~~~~d~~~~~~~W~~~~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~ 390 (557)
+..+|.......|+... ...... .+..+|++|++++.+ | .+.+||+++... .|+
T Consensus 21 v~a~d~~tG~~~W~~~~---~~~~s~-p~~~~g~~~v~~s~d-g------------~l~a~d~~tG~~-~w~ 74 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE---DPVLQV-PTHVEEPAFLPDPND-G------------SLYTLGSKNNEG-LTK 74 (369)
T ss_dssp EEEEETTTCCEEEEEEC---CCSCCC-C-----CCEEECTTT-C------------CEEEC-----CC-SEE
T ss_pred EEEEECCCCCEEEEecC---CCceec-ceEcCCCEEEEeCCC-C------------EEEEEECCCCce-eee
Confidence 34455554445787653 112222 234588898886533 1 468899876522 465
No 268
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.44 E-value=1.5e+02 Score=28.73 Aligned_cols=58 Identities=7% Similarity=0.134 Sum_probs=36.6
Q ss_pred EEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccccc-ccceeccCCcEEEecCCC
Q 041651 345 MILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYH-SSAILLTDGRVLIGGSNP 420 (557)
Q Consensus 345 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yh-s~a~llpdG~V~v~GG~~ 420 (557)
+++-++|+||+..-.. ..+.+|||++. ++..+...+ +..+ ...++-+||++|++....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 3455789999975322 26899999666 666554332 2222 223344899999997754
No 269
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=24.37 E-value=2.6e+02 Score=28.74 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=0.0
Q ss_pred EEEEee-CCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcE
Q 041651 53 HMQLLH-DNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTL 131 (557)
Q Consensus 53 h~~~~~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i 131 (557)
|++++- +|+||.||....|............. ......+-.+....+..+.......| ++..+|+|
T Consensus 268 hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~----------~~~P~~v~~~~~~~i~~ia~G~~hs~---~lt~~G~v 334 (473)
T 3of7_A 268 HCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL----------VTKPKRLALPDNVVIRSIAAGEHHSL---ILSQDGDL 334 (473)
T ss_dssp EEEEEETTSCEEEEEECTTSTTCCCSCCCTTCE----------EEEEEECCCCTTCCEEEEEECSSEEE---EEETTSCE
T ss_pred eEEEEecCCCEEEeCCCCCCCcCCCCcccCCce----------eeccccccccCCccEEEEEeCCCeEE---EEeCCCeE
Q ss_pred EEEcCCCCC------------------CCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEc
Q 041651 132 VQSGGYNDG------------------DHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIG 185 (557)
Q Consensus 132 ~v~GG~~~g------------------~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvG 185 (557)
|..|-...| .+.....-|.. -.....+.. +.... +|+++...||+||.-|
T Consensus 335 ~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~--v~~~~~v~~-Ia~G~-~hs~al~~~G~vy~wG 402 (473)
T 3of7_A 335 YSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTK--LNNVPKFKS-VAAGS-HHSVAVAQNGIAYSWG 402 (473)
T ss_dssp EEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEE--CCSSCCEEE-EEECS-SEEEEEETTSCEEEEE
T ss_pred EEEECCCCCccCCCccccccccccccCCceeeeccCcc--cCCCCceEE-EEeCC-CeEEEEeCCCcEEEee
No 270
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=22.89 E-value=5.5e+02 Score=25.18 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=32.3
Q ss_pred CCceEEEEecCCCCcceee-cCCCCceeeeEEEcCCCe-EEEEcCcCCCCCCcccCCCCccccEEEcCCCC
Q 041651 316 ISTCGRLVVSHANPSWVME-EMPLPRVMGDMILLPNGD-VIIINGAQLGTAGWELARGPMTRPIIYRPSEQ 384 (557)
Q Consensus 316 ~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~v~lpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (557)
.+.+..||.. +.+.. .++.+..-.+..+-+||+ ++++..... .++.+||.++.
T Consensus 297 ~~~V~VID~~----t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~------------~~V~ViD~~t~ 351 (373)
T 2mad_H 297 AKEVTSVTGL----VGQTSSQISLGHDVDAISVAQDGGPDLYALSAGT------------EVLHIYDAGAG 351 (373)
T ss_pred CCeEEEEECC----CCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCC------------CeEEEEECCCC
Confidence 3567777764 45554 445544444566779998 555543211 16889998876
No 271
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=22.80 E-value=3.2e+02 Score=26.61 Aligned_cols=116 Identities=10% Similarity=0.043 Sum_probs=60.5
Q ss_pred CceEEccCCcccceeEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccC--
Q 041651 38 GEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQ-- 115 (557)
Q Consensus 38 g~W~~~~~~~~~~~~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~-- 115 (557)
-+++.++.. -..+.++++.++|++|+.+.. |+ +.+++ +++.+.+...
T Consensus 21 ~~~~~va~~-l~~P~~ia~~pdG~l~V~e~~-----------g~-----------------I~~i~--~g~~~~~~~~~v 69 (352)
T 2ism_A 21 LRVEEVVGG-LEVPWALAFLPDGGMLIAERP-----------GR-----------------IRLFR--EGRLSTYAELSV 69 (352)
T ss_dssp CCEEEEECC-CSCEEEEEECTTSCEEEEETT-----------TE-----------------EEEEE--TTEEEEEEECCC
T ss_pred cEEEEEECC-CCCceEEEEcCCCeEEEEeCC-----------Ce-----------------EEEEE--CCCccEeecceE
Confidence 467776642 234678888899999887642 21 34444 2333322211
Q ss_pred ---CCcccccCeecCC----CcEEEEcCCCC--CCCeEEEEcCCCCCCCcee---cCCccccc----ccCcceEEEecCC
Q 041651 116 ---TDTWCSSGSVLPN----GTLVQSGGYND--GDHVVRTFTPCDDDQCDWI---ELPQHLSE----RRWYATNQILPDG 179 (557)
Q Consensus 116 ---~~~~c~~~~~l~d----G~i~v~GG~~~--g~~~v~~ydp~~~~t~~W~---~~~~~m~~----~R~y~s~~~L~dG 179 (557)
......+.++.+| |.||+.--... ....+.+|+.. ..++. .+-..++. ...-...+.-+||
T Consensus 70 ~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~---~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG 146 (352)
T 2ism_A 70 YHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL---GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG 146 (352)
T ss_dssp CCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC---SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS
T ss_pred eecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC---CCCcCceEEEEEeCCCCCCCCcCCceEEECCCC
Confidence 1122334455555 78988743210 01467788876 33221 11111221 1222456777899
Q ss_pred cEEEEcCc
Q 041651 180 RIIIIGGR 187 (557)
Q Consensus 180 ~vyvvGG~ 187 (557)
++|+.-|.
T Consensus 147 ~Lyv~~G~ 154 (352)
T 2ism_A 147 MLYVTTGE 154 (352)
T ss_dssp CEEEECCC
T ss_pred CEEEEECC
Confidence 99998664
No 272
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=22.43 E-value=2.8e+02 Score=26.29 Aligned_cols=50 Identities=12% Similarity=0.248 Sum_probs=28.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCc
Q 041651 127 PNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGR 187 (557)
Q Consensus 127 ~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~ 187 (557)
.||+||..|-...+.-. -|. .....+.. +.. -.+|+++.. ||+||.-|-.
T Consensus 196 ~~G~v~~wG~n~~gqlg----~p~----~~~~~v~~-i~~-G~~h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTT----VPT----EALSGVSA-IAS-GEWYSLALK-NGKVIAWGSS 245 (282)
T ss_dssp ETTEEEEEECCTTSTTC----CCG----GGGSSCCE-EEE-CSSCEEEEE-TTEEEEESTT
T ss_pred ECCeEEEEECCCCCCCC----CCc----ccCCCceE-EEc-CCCEEEEEE-CCEEEEecCC
Confidence 68999999865432111 121 11222222 333 346788877 9999998853
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=22.04 E-value=4.4e+02 Score=29.29 Aligned_cols=81 Identities=9% Similarity=-0.003 Sum_probs=39.0
Q ss_pred eEEEEECCCCcEEECccCCCcccccCeec-CCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEe
Q 041651 98 HSILYDVATNAYRPLMVQTDTWCSSGSVL-PNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQIL 176 (557)
Q Consensus 98 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l-~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L 176 (557)
.++++++....-+.+....-.+-.+.++. .+++||++=. +...|+++|... .....-+.. .....++-+.++
T Consensus 538 ~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~---~~~~I~~~d~dG--~~~~~v~~~--~~~l~~P~glav 610 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNG--GNRKTILED--EKRLAHPFSLAV 610 (791)
T ss_dssp EEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTS--CSCEEEEEC--TTTTSSEEEEEE
T ss_pred eEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC---CCCcEEEEecCC--CceEEEecC--CCccCCCCEEEE
Confidence 35666665443333322111122234444 4789999832 346899999862 222222111 001112323334
Q ss_pred cCCcEEEEc
Q 041651 177 PDGRIIIIG 185 (557)
Q Consensus 177 ~dG~vyvvG 185 (557)
.+++||++-
T Consensus 611 ~~~~lYwtD 619 (791)
T 3m0c_C 611 FEDKVFWTD 619 (791)
T ss_dssp ETTEEEEEE
T ss_pred eCCEEEEEE
Confidence 477888863
No 274
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=21.63 E-value=1.2e+02 Score=30.73 Aligned_cols=108 Identities=15% Similarity=0.148 Sum_probs=0.0
Q ss_pred ccceeEEEEeeCCeEEEE---eecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCC-----------cEEECc
Q 041651 48 GISAMHMQLLHDNRVIMF---DRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATN-----------AYRPLM 113 (557)
Q Consensus 48 ~~~~~h~~~~~~gkv~~~---gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~-----------~w~~l~ 113 (557)
+....+.+.-++|+.+++ .+...+ .+.+||..+. .-....
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~--------------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~ 145 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGS--------------------------IIAFFDVRTFSNEAKQQKRPFAYHKLL 145 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEE--------------------------EEEEEEHHHHHCTTCSSCCCSEEEECC
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCc--------------------------eEEEEEccccccCCcCCcceeeeeecc
Q ss_pred cCCCcccccCeecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC
Q 041651 114 VQTDTWCSSGSVLPN-GTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ 189 (557)
Q Consensus 114 ~~~~~~c~~~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~ 189 (557)
..+.....+.+.-++ +.++++|+.+ ..+++||.. +. ...-........-.+++--+||+.+++|+.++
T Consensus 146 ~~h~~~V~~v~~~p~~~~~las~s~D---g~v~iwD~~---~~--~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg 214 (434)
T 2oit_A 146 KDAGGMVIDMKWNPTVPSMVAVCLAD---GSIAVLQVT---ET--VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG 214 (434)
T ss_dssp CSGGGSEEEEEECSSCTTEEEEEETT---SCEEEEEES---SS--EEEEEEECGGGCEEEEEECTTSSCEEEEETTS
T ss_pred CCCCCceEEEEECCCCCCEEEEEECC---CeEEEEEcC---CC--cceeeccCCCCceeEEEEcCCCCEEEEEcCCC
No 275
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.59 E-value=89 Score=32.93 Aligned_cols=64 Identities=6% Similarity=-0.090 Sum_probs=38.4
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccc-cccCcceEEEecCCcEEEEcCcCCCceeEe
Q 041651 122 SGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLS-ERRWYATNQILPDGRIIIIGGRRQFNYEFY 195 (557)
Q Consensus 122 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 195 (557)
+.+.-++|..+++|+.. ..+++||.. +..- ... +. ..-.-.+++.-++|+.++.|+.++ ++.+|
T Consensus 360 ~v~fsp~~~~l~s~~~d---~tv~lwd~~---~~~~--~~~-l~gH~~~V~sva~Sp~g~~l~Sgs~Dg-tv~lw 424 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGA---SSLRAVPSR---AAFA--VHP-LVSRETTITAIGVSRLHPMVLAGSADG-SLIIT 424 (524)
T ss_dssp CEEEETTTTEEEEECSS---SEEEEEETT---CTTC--CEE-EEECSSCEEEEECCSSCCBCEEEETTT-EEECC
T ss_pred ceEeCCCcCeEEEeCCC---CcEEEEECc---cccc--cee-eecCCCceEEEEeCCCCCeEEEEECCC-EEEEE
Confidence 35667889999988763 579999987 3221 001 11 122234455567899888887654 44444
Done!